RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PSD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000146005

Ensembl transcript IDs: ENST00000274710.4, ENST00000651792.1

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACCCATGCTCAGGAAGCACATCTGTCCACAGCTGCCAGAGCTCCTaGCTCTGCTCTCCACTCACCCGCCCTCGGGAAGTGAAGGGTGGG +
Preference number: 1 (lower is better)
Translates to: NPCSGSTSVHSCQSS*LCSPLTRPREVKGG
Trigger: CCCACCCTTCACTTCCCGAGGGCGGGTGAGTGGAGAGCAGAGCCAGGAGCTCTGGCAGCTGTGGACAGATGTGCTTCCTGAGCATGGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR GCA 90 bp CAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAGGCTTTCTaGACCCCTCTAGCTGCCCATCAACTGACTGGAGCTTGGTCCAAG +
Preference number: 1 (lower is better)
Translates to: QRHKRHLHLLGPQAF*TPLAAHQLTGAWSK
Trigger: CTTGGACCAAGCTCCAGTCAGTTGATGGGCAGCTAGAGGGGTGCAGAAAGCCTGTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR GCA 90 bp TGGAGAGGAAAACAAGGGCCAGGGAGAGGGTCTGATGCCCGGAGATaGCCAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCAT +
Preference number: 1 (lower is better)
Translates to: WRGKQGPGRGSDARR*PRTQGDQRHKRHLH
Trigger: ATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGCCCTTGTTTTCCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR TCA 90 bp TTTACACTGAAAGGGCACAAGCCTGGGTCCCAGATTATTGTGATGTaGGGCAGGAGACCTGGGCATGGTTCTGGAGGCTGCTGGGAGGAG +
Preference number: 1 (lower is better)
Translates to: FTLKGHKPGSQIIVM*GRRPGHGSGGCWEE
Trigger: CTCCTCCCAGCAGCCTCCAGAACCATGCCCAGGTCTCCTGCCTCACATCACAATAATCTGGGACCCAGGCTTGTGCCCTTTCAGTGTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR GCA 90 bp GACAACAGCCCTTCCAGCTTCTCCAGCGAGGTGGTGTCTAGAGCATaGACACAACTGGCCTACAAAATGAGGCTCCATGGTGGAGAGGAA +
Preference number: 1 (lower is better)
Translates to: DNSPSSFSSEVVSRA*TQLAYKMRLHGGEE
Trigger: TTCCTCTCCACCATGGAGCCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAAGCTGGAAGGGCTGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR TCA 90 bp GGAGGCAGTGTGATCTCAATGGATGAAAAGAAGTGGATGCACATGTaGTGGAGTCAGCTTTACACTGAAAGGGCACAAGCCTGGGTCCCA +
Preference number: 1 (lower is better)
Translates to: GGSVISMDEKKWMHM*WSQLYTERAQAWVP
Trigger: TGGGACCCAGGCTTGTGCCCTTTCAGTGTAAAGCTGACTCCATCACATGTGCATCCACTTCTTTTCATCCATTGAGATCACACTGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR TCA 90 bp TTGTCAGTTGGAGAAATGCAGGGCTTAAAGGTGCTAGCTAATCCGTaGTCGTCAAGTGGCAAATTTCTCCACTCTTCCCAGATGTGGCCT +
Preference number: 1 (lower is better)
Translates to: LSVGEMQGLKVLANP*SSSGKFLHSSQMWP
Trigger: AGGCCACATCTGGGAAGAGTGGAGAAATTTGCCACTTGACGATCACGGATTAGCTAGCACCTTTAAGCCCTGCATTTCTCCAACTGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CCA 90 bp CTACATCTCTCCACATACTCAATAGCCCCTTGCCTCAAATGTGAGTaGGCCTGTAAAGTTAGATACTTAGTTGCAAGCCTGGCTTATTTT +
Preference number: 1 (lower is better)
Translates to: LHLSTYSIAPCLKCE*ACKVRYLVASLAYF
Trigger: AAAATAAGCCAGGCTTGCAACTAAGTATCTAACTTTACAGGCCCACTCACATTTGAGGCAAGGGGCTATTGAGTATGTGGAGAGATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR CCA 90 bp CTCACCCGCCCTCGGGAAGTGAAGGGTGGGACACTGACCCCGAAACTCACAGAAGGCATCTCCATCTCCTaGGCCCACAGGCTTTCTGCA +
Preference number: 2 (lower is better)
Translates to: LTRPREVKGGTLTPKLTEGISIS*AHRLSA
Trigger: TGCAGAAAGCCTGTGGGCCCAGGAGATGGAGATGCC...TTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR GCA 90 bp GTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACTTTTGAGGCAGCATGGGCTAGAGCGTCAGGAATaGCAGGGGGCCAGGTGCAGC +
Preference number: 2 (lower is better)
Translates to: VKGGTLTPKLTELLRQHGLERQE*QGARCS
Trigger: GCTGCACCTGGCCCCCTGGCATTCCTGACGCTCTAG...CCCATGCTGCCTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR CCA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACGGTCCAAGTGGCCCCTaGCTGGAATTGTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: QGRKEINATNGISISWAHGPSGP*LELCSL
Trigger: CAGTGAGCACAATTCCAGCCAGGGGCCACTTGGACC...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR GCA 90 bp AAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAGGCTTTCTCCCACTGGAGACATCTaGCCACCCTGGGGTCTGCAA +
Preference number: 2 (lower is better)
Translates to: KEINATNGISISWAHRLSPTGDI*PPWGLQ
Trigger: TTGCAGACCCCAGGGTGGGCAGATGTCTCCAGTGGG...AGAAAGCCTGTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR CCA 90 bp GTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACTTTTGAGGCAGCATGGGAGGAGAGGATGGTGCTaGTGGTCGGCAGACCTGCTG +
Preference number: 2 (lower is better)
Translates to: VKGGTLTPKLTELLRQHGRRGWC*WSADLL
Trigger: CAGCAGGTCTGCCGACCACCAGCACCATCCTCTCCT...CCCATGCTGCCTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR CCA 90 bp AGAGAAAGACCTGGGAAGACAACAGCCCTTCCAGCTTCTCCAGCGAGGTGGTGTGGAGCTTGGTCCAAGTaGCCCCTGGCTGGAATTGTG +
Preference number: 2 (lower is better)
Translates to: RERPGKTTALPASPARWCGAWSK*PLAGIV
Trigger: CACAATTCCAGCCAGGGGCCACTTGGACCAAGCTCC...ACACCACCTCGCTGGAGAAGCTGGAAGGGCTGTTGTCTTCCCAGGTCTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR CCA 90 bp CTCACCCGCCCTCGGGAAGTGAAGGGTGGGACACTGACCCCGAAACTCACAGAAGAGAAGAGAAAGACCTaGGAAGACAACAGCCCTTCC +
Preference number: 2 (lower is better)
Translates to: LTRPREVKGGTLTPKLTEEKRKT*EDNSPS
Trigger: GGAAGGGCTGTTGTCTTCCCAGGTCTTTCTCTTCTC...TTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR GCA 90 bp GTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACTTTTGAGGCAGCATGGGTCTGATGCCCGGAGATaGCCAAGGACGCAAGGAGAT +
Preference number: 2 (lower is better)
Translates to: VKGGTLTPKLTELLRQHGSDARR*PRTQGD
Trigger: ATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGA...CCCATGCTGCCTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR GCA 90 bp CTCACCCGCCCTCGGGAAGTGAAGGGTGGGACACTGACCCCGAAACTCACAGAAGTGGTGTCTAGAGCATaGACACAACTGGCCTACAAA +
Preference number: 2 (lower is better)
Translates to: LTRPREVKGGTLTPKLTEVVSRA*TQLAYK
Trigger: TTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCAC...TTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR CCA 90 bp AAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAGGCTTTCTGACATCTGCCCACCCTaGGGTCTGCAAATCCATGTC +
Preference number: 2 (lower is better)
Translates to: KEINATNGISISWAHRLSDICPP*GLQIHV
Trigger: GACATGGATTTGCAGACCCCAGGGTGGGCAGATGTC...AGAAAGCCTGTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR TCA 90 bp CTCACCCGCCCTCGGGAAGTGAAGGGTGGGACACTGACCCCGAAACTCACAGAAAAGTGGATGCACATGTaGTGGAGTCAGCTTTACACT +
Preference number: 2 (lower is better)
Translates to: LTRPREVKGGTLTPKLTEKWMHM*WSQLYT
Trigger: AGTGTAAAGCTGACTCCATCACATGTGCATCCACTT...TTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR CCA 90 bp AACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTTGGGCTTGAGAGGATGGTGCTGGTaGTCGGCAGACCTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: NQELRASITVLRQASLGLRGWCW*SADLLL
Trigger: CAGCAGCAGGTCTGCCGACCACCAGCACCATCCTCT...CAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR CCA 90 bp AACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTTGGGCTTGACCTGGGCATGGTTCTaGAGGCTGCTGGGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: NQELRASITVLRQASLGLTWAWF*RLLGGE
Trigger: CTCTCCTCCCAGCAGCCTCCAGAACCATGCCCAGGT...CAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR TCA 90 bp ACACCCCAGGATATCCATGGGACAAACGGGGCGGTGCATACACGCTCTATTTTTTGGAATTGTGCTCACTaGCCCCACTGGAGACATCTG +
Preference number: 2 (lower is better)
Translates to: TPQDIHGTNGAVHTRSIFWNCAH*PHWRHL
Trigger: CAGATGTCTCCAGTGGGGTCAGTGAGCACAATTCCA...AAAAATAGAGCGTGTATGCACCGCCCCGTTTGTCCCATGGATATCCTGGGGTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR GCA 90 bp AGACAGAGTGTCTTTTATTCCTATAGCAGTAGATCTGTCCAAGAGGCCACCTCTGGGAGGAGAGGATGGTaGTGGTGGTCGGCAGACCTG +
Preference number: 2 (lower is better)
Translates to: RQSVFYSYSSRSVQEATSGRRGW*WWSADL
Trigger: CAGGTCTGCCGACCACCAGCACCATCCTCTCCTCCC...AGAGGTGGCCTCTTGGACAGATCTACTGCTATAGGAATAAAAGACACTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR TCA 90 bp ACACCCCAGGATATCCATGGGACAAACGGGGCGGTGCATACACGCTCTATTTTTCAGATTATTGTGATGTaGGGCAGGAGACCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: TPQDIHGTNGAVHTRSIFQIIVM*GRRPGH
Trigger: ATGCCCAGGTCTCCTGCCTCACATCACAATAATCTG...AAAAATAGAGCGTGTATGCACCGCCCCGTTTGTCCCATGGATATCCTGGGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR GCA 90 bp AGACAGAGTGTCTTTTATTCCTATAGCAGTAGATCTGTCCAAGAGGCCACCTCTGGTGGTCGGCAGACCTaGTGCTGGTCAACTCAGAGG +
Preference number: 2 (lower is better)
Translates to: RQSVFYSYSSRSVQEATSGGRQT*CWSTQR
Trigger: CCTCTGAGTTGACCAGCAGCAGGTCTGCCGACCACC...AGAGGTGGCCTCTTGGACAGATCTACTGCTATAGGAATAAAAGACACTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR CCA 90 bp GTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACTTTTGAGGCAGCATGGGTCCGTGATCGTCAAGTaGCAAATTTCTCCACTCTTC +
Preference number: 2 (lower is better)
Translates to: VKGGTLTPKLTELLRQHGSVIVK*QISPLF
Trigger: GAAGAGTGGAGAAATTTGCCACTTGACGATCACGGA...CCCATGCTGCCTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR CCA 90 bp AGACAGAGTGTCTTTTATTCCTATAGCAGTAGATCTGTCCAAGAGGCCACCTCTCGGCAGACCTGCTGCTaGTCAACTCAGAGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: RQSVFYSYSSRSVQEATSRQTCC*STQRKE
Trigger: CTCCTTCCTCTGAGTTGACCAGCAGCAGGTCTGCCG...AGAGGTGGCCTCTTGGACAGATCTACTGCTATAGGAATAAAAGACACTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CAA 90 bp ACCGTCCTCCGACAAGCATCTTTGGGCTTGTTGACAAGCAGCCATTaGCGAGACAGAGTGTCTTTTATTCCTATAGCAGTAGATCTGTCC +
Preference number: 2 (lower is better)
Translates to: TVLRQASLGLLTSSH*RDRVSFIPIAVDLS
Trigger: GGACAGATCTACTGCTATAGGAATAAAAGACACTCTGTCTCGCAAATGGCTGCTTGTCAACAAGCCCAAAGATGCTTGTCGGAGGACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR TCA 90 bp AGACAGAGTGTCTTTTATTCCTATAGCAGTAGATCTGTCCAAGAGGCCACCTCTAACTGGCCTACAAAATaGGGCTCCATGGTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: RQSVFYSYSSRSVQEATSNWPTK*GSMVER
Trigger: CCTCTCCACCATGGAGCCTCATTTTGTAGGCCAGTT...AGAGGTGGCCTCTTGGACAGATCTACTGCTATAGGAATAAAAGACACTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CAA 90 bp GAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTTGGGCTaGTTGACAAGCAGCCATTTGCGAGACAGAGTGTCTTTTATTCCT +
Preference number: 2 (lower is better)
Translates to: ELRASITVLRQASLG*LTSSHLRDRVSFIP
Trigger: AGGAATAAAAGACACTCTGTCTCGCAAATGGCTGCTTGTCAACAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CAA 90 bp AACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTaGGGCTTGTTGACAAGCAGCCATTTGCGAGACAGAGTGTCTTTT +
Preference number: 2 (lower is better)
Translates to: NQELRASITVLRQAS*GLLTSSHLRDRVSF
Trigger: AAAAGACACTCTGTCTCGCAAATGGCTGCTTGTCAACAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR GCA 90 bp ATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATGGTCGGCAGACCTGCTaGTGGTCAACTCAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: INNLSFHLFPQPRIKGFHGRQTC*WSTQRK
Trigger: CTTCCTCTGAGTTGACCAGCAGCAGGTCTGCCGACC...ATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CAA 90 bp TTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTTGGGCTTGTaGACAAGCAGCCATTTGCGAGACAGAGTGTCTTTTATTCCTATA +
Preference number: 2 (lower is better)
Translates to: LRASITVLRQASLGL*TSSHLRDRVSFIPI
Trigger: TATAGGAATAAAAGACACTCTGTCTCGCAAATGGCTGCTTGTCAACAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR GCA 90 bp TTGTTGACAAGCAGCCATTTGCGAGACAGAGTGTCTTTTATTCCTATAGCAGTAATGAAAAGAAGTGGATaGACATGTGATGGAGTCAGC +
Preference number: 2 (lower is better)
Translates to: LLTSSHLRDRVSFIPIAVMKRSG*TCDGVS
Trigger: GCTGACTCCATCACATGTGCATCCACTTCTTTTCAT...TACTGCTATAGGAATAAAAGACACTCTGTCTCGCAAATGGCTGCTTGTCAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR GCA 72 bp AAACAAGGGCCAGGGAGAGGGTCTGATGCCCGGAGATaGCCAAGGACGCAAGGAGATCAACGCCACAAACGG +
Preference number: 3 (lower is better)
Translates to: KQGPGRGSDARR*PRTQGDQRHKR
Trigger: CCGTTTGTGGCGTTGATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGCCCTTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CCA 72 bp CTAGCTGCCCATCAACTGACTGGAGCTTGGTCCAAGTaGCCCCTGGCTGGAATTGTGCTCACTGACCCCACT +
Preference number: 3 (lower is better)
Translates to: LAAHQLTGAWSK*PLAGIVLTDPT
Trigger: AGTGGGGTCAGTGAGCACAATTCCAGCCAGGGGCCACTTGGACCAAGCTCCAGTCAGTTGATGGGCAGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CCA 72 bp TGCACCCCTCTAGCTGCCCATCAACTGACTGGAGCTTaGTCCAAGTGGCCCCTGGCTGGAATTGTGCTCACT +
Preference number: 3 (lower is better)
Translates to: CTPLAAHQLTGA*SKWPLAGIVLT
Trigger: AGTGAGCACAATTCCAGCCAGGGGCCACTTGGACCAAGCTCCAGTCAGTTGATGGGCAGCTAGAGGGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CCA 72 bp GGCTTTCTGCACCCCTCTAGCTGCCCATCAACTGACTaGAGCTTGGTCCAAGTGGCCCCTGGCTGGAATTGT +
Preference number: 3 (lower is better)
Translates to: GFLHPSSCPSTD*SLVQVAPGWNC
Trigger: ACAATTCCAGCCAGGGGCCACTTGGACCAAGCTCCAGTCAGTTGATGGGCAGCTAGAGGGGTGCAGAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CCA 72 bp CTGCTCTCCACTCACCCGCCCTCGGGAAGTGAAGGGTaGGACACTGACCCCGAAACTCACAGAACTTTTGAG +
Preference number: 3 (lower is better)
Translates to: LLSTHPPSGSEG*DTDPETHRTFE
Trigger: CTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAGTGGAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR TCA 72 bp AAAGGGCACAAGCCTGGGTCCCAGATTATTGTGATGTaGGGCAGGAGACCTGGGCATGGTTCTGGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: KGHKPGSQIIVM*GRRPGHGSGGC
Trigger: GCAGCCTCCAGAACCATGCCCAGGTCTCCTGCCTCACATCACAATAATCTGGGACCCAGGCTTGTGCCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CCA 72 bp CCGTGGTCCCATCCGACTCACACCCCAGGATATCCATaGGACAAACGGGGCGGTGCATACACGCTCTATTTT +
Preference number: 3 (lower is better)
Translates to: PWSHPTHTPGYP*DKRGGAYTLYF
Trigger: AAAATAGAGCGTGTATGCACCGCCCCGTTTGTCCCATGGATATCCTGGGGTGTGAGTCGGATGGGACCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR GCA 72 bp CCTTCCAGCTTCTCCAGCGAGGTGGTGTCTAGAGCATaGACACAACTGGCCTACAAAATGAGGCTCCATGGT +
Preference number: 3 (lower is better)
Translates to: PSSFSSEVVSRA*TQLAYKMRLHG
Trigger: ACCATGGAGCCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAAGCTGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CCA 72 bp AGCATGCACACAACTGGCCTACAAAATGAGGCTCCATaGTGGAGAGGAAAACAAGGGCCAGGGAGAGGGTCT +
Preference number: 3 (lower is better)
Translates to: SMHTTGLQNEAP*WRGKQGPGRGS
Trigger: AGACCCTCTCCCTGGCCCTTGTTTTCCTCTCCACCATGGAGCCTCATTTTGTAGGCCAGTTGTGTGCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CCA 72 bp GGGAAGACAACAGCCCTTCCAGCTTCTCCAGCGAGGTaGTGTCTAGAGCATGCACACAACTGGCCTACAAAA +
Preference number: 3 (lower is better)
Translates to: GKTTALPASPAR*CLEHAHNWPTK
Trigger: TTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAAGCTGGAAGGGCTGTTGTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR TCA 72 bp TGGTGTCTAGAGCATGCACACAACTGGCCTACAAAATaGGGCTCCATGGTGGAGAGGAAAACAAGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: WCLEHAHNWPTK*GSMVERKTRAR
Trigger: CCTGGCCCTTGTTTTCCTCTCCACCATGGAGCCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR CAA 90 bp TTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTCAACTGACTGGAGCTaGGTCCAAGTGGCCCCTGGC +
Preference number: 3 (lower is better)
Translates to: FSHNQELRASITVLRQASSTDWS*VQVAPG
Trigger: GCCAGGGGCCACTTGGACCAAGCTCCAGTCAGTTGA...AGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR TCA 72 bp GGAGAAATGCAGGGCTTAAAGGTGCTAGCTAATCCGTaGTCGTCAAGTGGCAAATTTCTCCACTCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: GEMQGLKVLANP*SSSGKFLHSSQ
Trigger: CTGGGAAGAGTGGAGAAATTTGCCACTTGACGATCACGGATTAGCTAGCACCTTTAAGCCCTGCATTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR TCA 72 bp GTGATCTCAATGGATGAAAAGAAGTGGATGCACATGTaGTGGAGTCAGCTTTACACTGAAAGGGCACAAGCC +
Preference number: 3 (lower is better)
Translates to: VISMDEKKWMHM*WSQLYTERAQA
Trigger: GGCTTGTGCCCTTTCAGTGTAAAGCTGACTCCATCACATGTGCATCCACTTCTTTTCATCCATTGAGATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CCA 72 bp TCGTCAAGTGGCAAATTTCTCCACTCTTCCCAGATGTaGCCTTGGCTAAGCCTTTCTGATTCACTAGACAAA +
Preference number: 3 (lower is better)
Translates to: SSSGKFLHSSQM*PWLSLSDSLDK
Trigger: TTTGTCTAGTGAATCAGAAAGGCTTAGCCAAGGCCACATCTGGGAAGAGTGGAGAAATTTGCCACTTGACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CCA 72 bp TCCACATACTCAATAGCCCCTTGCCTCAAATGTGAGTaGGCCTGTAAAGTTAGATACTTAGTTGCAAGCCTG +
Preference number: 3 (lower is better)
Translates to: STYSIAPCLKCE*ACKVRYLVASL
Trigger: CAGGCTTGCAACTAAGTATCTAACTTTACAGGCCCACTCACATTTGAGGCAAGGGGCTATTGAGTATGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR TCA 72 bp CCACTCTTCCCAGATGTGGCCTTGGCTAAGCCTTTCTaGTTCACTAGACAAATGAAAGAAATAGCGACAGAA +
Preference number: 3 (lower is better)
Translates to: PLFPDVALAKPF*FTRQMKEIATE
Trigger: TTCTGTCGCTATTTCTTTCATTTGTCTAGTGAATCAGAAAGGCTTAGCCAAGGCCACATCTGGGAAGAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR GCA 72 bp AAATCACTACATCTCTCCACATACTCAATAGCCCCTTaGCTCAAATGTGAGTGGGCCTGTAAAGTTAGATAC +
Preference number: 3 (lower is better)
Translates to: KSLHLSTYSIAP*LKCEWACKVRY
Trigger: GTATCTAACTTTACAGGCCCACTCACATTTGAGGCAAGGGGCTATTGAGTATGTGGAGAGATGTAGTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR CAA 90 bp ATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATCAAGCATCTTTGGGCTaGTTGACAAGCAGCCATTTG +
Preference number: 3 (lower is better)
Translates to: INNLSFHLFPQPRIKGFHQASLG*LTSSHL
Trigger: CAAATGGCTGCTTGTCAACAAGCCCAAAGATGCTTG...ATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR-3UTR CAA 90 bp ACAATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCTTGACAAGCAGCCATTaGCGAGACAGAGTGTCTTTT +
Preference number: 3 (lower is better)
Translates to: TINNLSFHLFPQPRIKGFLTSSH*RDRVSF
Trigger: AAAAGACACTCTGTCTCGCAAATGGCTGCTTGTCAA...GAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR TCA 72 bp GGGGCCAGATGGTTTGGGTCTAAAACACACTTCAGCTaGTCCAACTTAAATAATCTGAATTTAAATCACTAC +
Preference number: 3 (lower is better)
Translates to: GARWFGSKTHFS*SNLNNLNLNHY
Trigger: GTAGTGATTTAAATTCAGATTATTTAAGTTGGATCAGCTGAAGTGTGTTTTAGACCCAAACCATCTGGCCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR TCA 72 bp GATGTATATTTGTGTCTGTATAAAAAGGAGGCAGTGTaGTCTCAATGGATGAAAAGAAGTGGATGCACATGT +
Preference number: 3 (lower is better)
Translates to: DVYLCLYKKEAV*SQWMKRSGCTC
Trigger: ACATGTGCATCCACTTCTTTTCATCCATTGAGATCACACTGCCTCCTTTTTATACAGACACAAATATACATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp CTCACCCGCCCTCGGGAAGTGAAGGGTGGGACACTGACCCCGAAACTCACAGAAAGCGCCGCAGGGGGCTaGCCAGCTCCCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: LTRPREVKGGTLTPKLTESAAGG*PAPHHH
Trigger: GTGGTGATGGGGAGCTGGGCAGCCCCCTGCGGCGCT...TTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AAGGGCCAGGGAGAGGGTCTGATGCCCGGAGATGCCCAAGGACGCAAGGAGATCGACCGGGGTCACGGGTaGCATCGCCTTCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: KGQGEGLMPGDAQGRKEIDRGHG*HRLPQA
Trigger: TGCCTGAGGAAGGCGATGCCACCCGTGACCCCGGTC...GATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AAGGGCCAGGGAGAGGGTCTGATGCCCGGAGATGCCCAAGGACGCAAGGAGATCCCCCCTGGCACCCGTTaGCCAGAGGGTCTGCACTAC +
Preference number: 4 (lower is better)
Translates to: KGQGEGLMPGDAQGRKEIPPGTR*PEGLHY
Trigger: GTAGTGCAGACCCTCTGGCCAACGGGTGCCAGGGGG...GATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGCCCTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp GCCCTTCCAGCTTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTCGGCGTGCCAGCCGATaGGCAGCTTCACTGACCCCC +
Preference number: 4 (lower is better)
Translates to: ALPASPARWCLEHAHNWPRRASR*AASLTP
Trigger: GGGGGTCAGTGAAGCTGCTCATCGGCTGGCACGCCG...AGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAAGCTGGAAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp CTTGGTCCAAGTGGCCCCTGGCTGGAATTGTGCTCACTGACCCCACTGGAGACAGTGCCCCTTCGCTCGTaGCCTGGGCTGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LGPSGPWLELCSLTPLETVPLRS*PGLQRL
Trigger: CAGCCTCTGCAGCCCAGGGCACGAGCGAAGGGGCAC...TGTCTCCAGTGGGGTCAGTGAGCACAATTCCAGCCAGGGGCCACTTGGACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AAGGGCCAGGGAGAGGGTCTGATGCCCGGAGATGCCCAAGGACGCAAGGAGATCCTAGAGCGTCAGGAATaGCAGGGGGCCAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: KGQGEGLMPGDAQGRKEILERQE*QGARCS
Trigger: GCTGCACCTGGCCCCCTGGCATTCCTGACGCTCTAG...GATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp CTCACCCGCCCTCGGGAAGTGAAGGGTGGGACACTGACCCCGAAACTCACAGAAGGAGCTGACAGCGGCTaGGAAGGCCGGGGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LTRPREVKGGTLTPKLTEGADSG*EGRGRE
Trigger: TTCTCTGCCCCGGCCTTCCCAGCCGCTGTCAGCTCC...TTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp CTCACCCGCCCTCGGGAAGTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACGCAGTTGCTCCTCCTaGCAGAGGCGGGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LTRPREVKGGTLTPKLTERSCSS*QRRVVQ
Trigger: CTGCACCACCCGCCTCTGCCAGGAGGAGCAACTGCG...TTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AAGGGCCAGGGAGAGGGTCTGATGCCCGGAGATGCCCAAGGACGCAAGGAGATCTTGCTGCCAGTCACATaGCCCTGGCTGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KGQGEGLMPGDAQGRKEILLPVT*PWLRAG
Trigger: CCCTGCCCTCAGCCAGGGCCATGTGACTGGCAGCAA...GATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGCCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AAGGGCCAGGGAGAGGGTCTGATGCCCGGAGATGCCCAAGGACGCAAGGAGATCGTTGGCCAGAGGGTCTaGACTACCAGGCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: KGQGEGLMPGDAQGRKEIVGQRV*TTRLQP
Trigger: GGGTTGGAGCCTGGTAGTGCAGACCCTCTGGCCAAC...GATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AAGGGCCAGGGAGAGGGTCTGATGCCCGGAGATGCCCAAGGACGCAAGGAGATCGGTGGTCGGCAGACCTaGTGCTGGTCAACTCAGAGG +
Preference number: 4 (lower is better)
Translates to: KGQGEGLMPGDAQGRKEIGGRQT*CWSTQR
Trigger: CCTCTGAGTTGACCAGCAGCAGGTCTGCCGACCACC...GATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AAGGGCCAGGGAGAGGGTCTGATGCCCGGAGATGCCCAAGGACGCAAGGAGATCCCAAGGCTGAGGCCATaGAAGGCCACATCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: KGQGEGLMPGDAQGRKEIPRLRP*KATSGS
Trigger: GGACCCAGATGTGGCCTTCCATGGCCTCAGCCTTGG...GATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp GCCCTTCCAGCTTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTCGGCCTCCTTGGACTTaGTGCCCCTCTCGACTGGGT +
Preference number: 4 (lower is better)
Translates to: ALPASPARWCLEHAHNWPRPPWT*CPSRLG
Trigger: ACCCAGTCGAGAGGGGCATCAAGTCCAAGGAGGCCG...AGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAAGCTGGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAGGCTTTCTCCGCGTCCCTTCAGGTaGCGGAGCCGCGATGTGGAG +
Preference number: 4 (lower is better)
Translates to: KEINATNGISISWAHRLSPRPFR*RSRDVE
Trigger: CTCCACATCGCGGCTCCGGCACCTGAAGGGACGCGG...AGAAAGCCTGTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp GCCCTTCCAGCTTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTCTGGGCTGCAGAGGCTaGTGTTCAGGCCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: ALPASPARWCLEHAHNWPLGCRG*CSGPHW
Trigger: CCAGTGAGGGCCTGAACAGCAGCCTCTGCAGCCCAG...AGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAAGCTGGAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACGGCTGCTGTACTGGGTaGCCCGCAGCAGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: QGRKEINATNGISISWAHGCCTG*PAAALT
Trigger: AGTCAGAGCTGCTGCGGGGCACCCAGTACAGCAGCC...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp CTCACCCGCCCTCGGGAAGTGAAGGGTGGGACACTGACCCCGAAACTCACAGAAGCTTGTCCTCCTCCATaGCAGCCACTGCTTCCGCCT +
Preference number: 4 (lower is better)
Translates to: LTRPREVKGGTLTPKLTEACPPP*QPLLPP
Trigger: AGGCGGAAGCAGTGGCTGCCATGGAGGAGGACAAGC...TTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AAGGGCCAGGGAGAGGGTCTGATGCCCGGAGATGCCCAAGGACGCAAGGAGATCGGTCCAAGTGGCCCCTaGCTGGAATTGTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KGQGEGLMPGDAQGRKEIGPSGP*LELCSL
Trigger: CAGTGAGCACAATTCCAGCCAGGGGCCACTTGGACC...GATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp AGAGAAAGACCTGGGAAGACAACAGCCCTTCCAGCTTCTCCAGCGAGGTGGTGTCCCCTCTCGACTGGGTaGCACCTGTGTTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RERPGKTTALPASPARWCPLSTG*HLCSAS
Trigger: GCTGGCCGAACACAGGTGTCACCCAGTCGAGAGGGG...ACACCACCTCGCTGGAGAAGCTGGAAGGGCTGTTGTCTTCCCAGGTCTTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp CTTGGTCCAAGTGGCCCCTGGCTGGAATTGTGCTCACTGACCCCACTGGAGACATGCTGTCATCAGGGTTaGACTGGCAGTACCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LGPSGPWLELCSLTPLETCCHQG*TGSTGG
Trigger: CCCGCCGGTACTGCCAGTGCAACCCTGATGACAGCA...TGTCTCCAGTGGGGTCAGTGAGCACAATTCCAGCCAGGGGCCACTTGGACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp CTCACCCGCCCTCGGGAAGTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACATCCAGGAAGGGGTTaGCACCATCCAGGATTCGCG +
Preference number: 4 (lower is better)
Translates to: LTRPREVKGGTLTPKLTEHPGRG*HHPGFA
Trigger: CGCGAATCCTGGATGGTGGCAACCCCTTCCTGGATG...TTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp GCCCTTCCAGCTTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTTGTCCTGGCTGCTCCTaGGACTCCTCTAGACCGCTG +
Preference number: 4 (lower is better)
Translates to: ALPASPARWCLEHAHNWPCPGCS*DSSRPL
Trigger: CAGCGGTCTAGAGGAGTCCCAGGAGCAGCCAGGACA...AGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAAGCTGGAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AAGGGCCAGGGAGAGGGTCTGATGCCCGGAGATGCCCAAGGACGCAAGGAGATCTCCTTGCTCGGTGCCTaGAAGAGGAATACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KGQGEGLMPGDAQGRKEISLLGA*KRNTLQ
Trigger: CTGGAGGGTATTCCTCTTCCAGGCACCGAGCAAGGA...GATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACACCTGGGCATGGTTCTaGAGGCTGCTGGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: QGRKEINATNGISISWAHTWAWF*RLLGGE
Trigger: CTCTCCTCCCAGCAGCCTCCAGAACCATGCCCAGGT...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CAA 72 bp CTGCACCCCTCTAGCTGCCCATCAACTGACTGGAGCTaGGTCCAAGTGGCCCCTGGCTGGAATTGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LHPSSCPSTDWS*VQVAPGWNCAH
Trigger: GTGAGCACAATTCCAGCCAGGGGCCACTTGGACCAAGCTCCAGTCAGTTGATGGGCAGCTAGAGGGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp CTCACCCGCCCTCGGGAAGTGAAGGGTGGGACACTGACCCCGAAACTCACAGAAGGCAGAGAAGATGGCTaGCACCAGGTTGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: LTRPREVKGGTLTPKLTEGREDG*HQVDPE
Trigger: CTCAGGATCAACCTGGTGGCAGCCATCTTCTCTGCC...TTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAGGCTTTCTGGGAGGAGAGGATGGTaGTGGTGGTCGGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: KEINATNGISISWAHRLSGRRGW*WWSADL
Trigger: CAGGTCTGCCGACCACCAGCACCATCCTCTCCTCCC...AGAAAGCCTGTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp GCCCTTCCAGCTTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTACATCTGTCCACAGCTaGCAGAGCTCCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ALPASPARWCLEHAHNWPTSVHS*QSSWLC
Trigger: GCAGAGCCAGGAGCTCTGGCAGCTGTGGACAGATGT...AGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAAGCTGGAAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAGGCTTTCTCCTTCGCTCGTGCCCTaGGCTGCAGAGGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: KEINATNGISISWAHRLSPSLVP*AAEAAV
Trigger: AACAGCAGCCTCTGCAGCCCAGGGCACGAGCGAAGG...AGAAAGCCTGTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AGAGAAAGACCTGGGAAGACAACAGCCCTTCCAGCTTCTCCAGCGAGGTGGTGTTCGAGGCTGCTGTACTaGGTGCCCCGCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RERPGKTTALPASPARWCSRLLY*VPRSSS
Trigger: AGAGCTGCTGCGGGGCACCCAGTACAGCAGCCTCGA...ACACCACCTCGCTGGAGAAGCTGGAAGGGCTGTTGTCTTCCCAGGTCTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp GTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACTTTTGAGGCAGCATGGGAGTCAGAGGCCCTGGTaGCCAGAGCGTGATGCACGC +
Preference number: 4 (lower is better)
Translates to: VKGGTLTPKLTELLRQHGSQRPW*PERDAR
Trigger: GCGTGCATCACGCTCTGGCCACCAGGGCCTCTGACT...CCCATGCTGCCTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp CTTGGTCCAAGTGGCCCCTGGCTGGAATTGTGCTCACTGACCCCACTGGAGACAGGAGCTTGGTCCAAGTaGCCCCTGGCTGGAATTGTG +
Preference number: 4 (lower is better)
Translates to: LGPSGPWLELCSLTPLETGAWSK*PLAGIV
Trigger: CACAATTCCAGCCAGGGGCCACTTGGACCAAGCTCC...TGTCTCCAGTGGGGTCAGTGAGCACAATTCCAGCCAGGGGCCACTTGGACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp GTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACTTTTGAGGCAGCATGGGTGTAGGTGGTGGCACTaGGCGCCTGTGGGACATCCA +
Preference number: 4 (lower is better)
Translates to: VKGGTLTPKLTELLRQHGCRWWH*APVGHP
Trigger: TGGATGTCCCACAGGCGCTCAGTGCCACCACCTACA...CCCATGCTGCCTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp AAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAGGCTTTCTACTTCTTCATGGAGCTaGCAGCGGCTGGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: KEINATNGISISWAHRLSTSSWS*QRLGRP
Trigger: CGGCCTTCCCAGCCGCTGTCAGCTCCATGAAGAAGT...AGAAAGCCTGTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp AGAGAAAGACCTGGGAAGACAACAGCCCTTCCAGCTTCTCCAGCGAGGTGGTGTTCACATGGCCCTGGCTaGGGGCAGGGCTTGAATGTG +
Preference number: 4 (lower is better)
Translates to: RERPGKTTALPASPARWCSHGPG*GQGLNV
Trigger: CACATTCAAGCCCTGCCCTCAGCCAGGGCCATGTGA...ACACCACCTCGCTGGAGAAGCTGGAAGGGCTGTTGTCTTCCCAGGTCTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp CAGCTTTACACTGAAAGGGCACAAGCCTGGGTCCCAGATTATTGTGATGTGAGGACTCCTCTAGACCGCTaGTGGTCCCCGCCGCGGGTC +
Preference number: 4 (lower is better)
Translates to: QLYTERAQAWVPDYCDVRTPLDR*WSPPRV
Trigger: GACCCGCGGCGGGGACCAGCAGCGGTCTAGAGGAGT...CCTCACATCACAATAATCTGGGACCCAGGCTTGTGCCCTTTCAGTGTAAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAGGCTTTCTCATTCTCAGAGCGGCTaGTGGAGATGGAGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: KEINATNGISISWAHRLSHSQSG*WRWSAA
Trigger: TGCGGCGCTCCATCTCCAGCAGCCGCTCTGAGAATG...AGAAAGCCTGTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAGGCTTTCTTTGTTCTTGCCCAGCTaGCGGGCCACATCACAGCGC +
Preference number: 4 (lower is better)
Translates to: KEINATNGISISWAHRLSLFLPS*RATSQR
Trigger: GCGCTGTGATGTGGCCCGGCAGCTGGGCAAGAACAA...AGAAAGCCTGTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AAGGGCCAGGGAGAGGGTCTGATGCCCGGAGATGCCCAAGGACGCAAGGAGATCCAAGAATGTTCTGAGTaGTCCGTCCAGAGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: KGQGEGLMPGDAQGRKEIQECSE*SVQSQA
Trigger: GGCTTGACTCTGGACGGAGCACTCAGAACATTCTTG...GATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACGCACGTTGGACTTCTTaGTGTAGTCAGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QGRKEINATNGISISWAHARWTS*CSQRPW
Trigger: CCAGGGCCTCTGACTACAGCAAGAAGTCCAACGTGC...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AAGGGCCAGGGAGAGGGTCTGATGCCCGGAGATGCCCAAGGACGCAAGGAGATCTACTCAATAGCCCCTTaGCTCAAATGTGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: KGQGEGLMPGDAQGRKEIYSIAP*LKCEWA
Trigger: GGCCCACTCACATTTGAGGCAAGGGGCTATTGAGTA...GATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACGCTTCTCCAGCGAGGTaGTGTCTAGAGCATGCACAC +
Preference number: 4 (lower is better)
Translates to: QGRKEINATNGISISWAHASPAR*CLEHAH
Trigger: GTGTGCATGCTCTAGACACCACCTCGCTGGAGAAGC...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp GTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACTTTTGAGGCAGCATGGGTCTCAAACGTGGCGCTaGAGCCATCCCGCACATCTG +
Preference number: 4 (lower is better)
Translates to: VKGGTLTPKLTELLRQHGSQTWR*SHPAHL
Trigger: CAGATGTGCGGGATGGCTTCAGCGCCACGTTTGAGA...CCCATGCTGCCTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp ACACCCCAGGATATCCATGGGACAAACGGGGCGGTGCATACACGCTCTATTTTTCTGGTGGCCAGAGCGTaGTGCACGCGAATGGCGTTC +
Preference number: 4 (lower is better)
Translates to: TPQDIHGTNGAVHTRSIFLVARA*CTRMAF
Trigger: GAACGCCATTCGCGTGCATCACGCTCTGGCCACCAG...AAAAATAGAGCGTGTATGCACCGCCCCGTTTGTCCCATGGATATCCTGGGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp AAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAGGCTTTCTGCTGAGGGCAGGGCTTaGATGTGTCTTCCGGAGAGA +
Preference number: 4 (lower is better)
Translates to: KEINATNGISISWAHRLSAEGRA*MCLPER
Trigger: TCTCTCCGGAAGACACATTCAAGCCCTGCCCTCAGC...AGAAAGCCTGTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp GTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACTTTTGAGGCAGCATGGGGGGTGGGGTTCCAGCTaGGACCTAGAGTCAAGACCT +
Preference number: 4 (lower is better)
Translates to: VKGGTLTPKLTELLRQHGGWGSS*DLESRP
Trigger: AGGTCTTGACTCTAGGTCTCAGCTGGAACCCCACCC...CCCATGCTGCCTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp CTCACCCGCCCTCGGGAAGTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACTGTACTCATCCTTCTaGAGGTACAGGATGGTCCCT +
Preference number: 4 (lower is better)
Translates to: LTRPREVKGGTLTPKLTELYSSF*RYRMVP
Trigger: AGGGACCATCCTGTACCTGCAGAAGGATGAGTACAG...TTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ACACCCCAGGATATCCATGGGACAAACGGGGCGGTGCATACACGCTCTATTTTTTTCCTCAGTGTCCGCTaGGGTGCCCCTTCGCTCGTG +
Preference number: 4 (lower is better)
Translates to: TPQDIHGTNGAVHTRSIFFLSVR*GAPSLV
Trigger: CACGAGCGAAGGGGCACCCCAGCGGACACTGAGGAA...AAAAATAGAGCGTGTATGCACCGCCCCGTTTGTCCCATGGATATCCTGGGGTGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp TTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTACAAAATGAGGCCATCCATGTCAGCGTaGGTCTTCCGGGTCAGGACG +
Preference number: 4 (lower is better)
Translates to: FSSEVVSRACTQLAYKMRPSMSA*VFRVRT
Trigger: CGTCCTGACCCGGAAGACTCACGCTGACATGGATGG...CCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp AACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTTGGGCTTGGCCAGGGAGAGGGTCTaGTGCCCGGAGATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: NQELRASITVLRQASLGLARERV*CPEMPK
Trigger: CTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGC...CAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTTGGGCTTGGCTCGTGCCCTGGGCTaGAGAGGCTGCTGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: NQELRASITVLRQASLGLARALG*RGCCSG
Trigger: GCCTGAACAGCAGCCTCTGCAGCCCAGGGCACGAGC...CAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp CAGCTTTACACTGAAAGGGCACAAGCCTGGGTCCCAGATTATTGTGATGTGAGGACGCCATGTCCCCAATaGCCAACCCAGCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QLYTERAQAWVPDYCDVRTPCPQ*PTQPLA
Trigger: AGCCAGGGGCTGGGTTGGGCATTGGGGACATGGCGT...CCTCACATCACAATAATCTGGGACCCAGGCTTGTGCCCTTTCAGTGTAAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ACACCCCAGGATATCCATGGGACAAACGGGGCGGTGCATACACGCTCTATTTTTTGTTCAGGCCCTCACTaGCCATCCCATTCCGGACCC +
Preference number: 4 (lower is better)
Translates to: TPQDIHGTNGAVHTRSIFCSGPH*PSHSGP
Trigger: GGGTCCGGAATGGGATGGCCAGTGAGGGCCTGAACA...AAAAATAGAGCGTGTATGCACCGCCCCGTTTGTCCCATGGATATCCTGGGGTGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTTGGGCTTGGCTTCACTGACCCCCTaGCACCCGTTGGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: NQELRASITVLRQASLGLASLTP*HPLARG
Trigger: CCCTCTGGCCAACGGGTGCCAGGGGGTCAGTGAAGC...CAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ACACCCCAGGATATCCATGGGACAAACGGGGCGGTGCATACACGCTCTATTTTTGATGCCCCTCTCGACTaGGTGACACCTGTGTTCGGC +
Preference number: 4 (lower is better)
Translates to: TPQDIHGTNGAVHTRSIFDAPLD*VTPVFG
Trigger: GCCGAACACAGGTGTCACCCAGTCGAGAGGGGCATC...AAAAATAGAGCGTGTATGCACCGCCCCGTTTGTCCCATGGATATCCTGGGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp GCCCTTCCAGCTTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTCACTCTTCCCAGATGTaGCCTTGGCTAAGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: ALPASPARWCLEHAHNWPHSSQM*PWLSLS
Trigger: AGAAAGGCTTAGCCAAGGCCACATCTGGGAAGAGTG...AGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAAGCTGGAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp GTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACTTTTGAGGCAGCATGGGGGGCCTGGACTCCGCTaGATCTTCCAGAATGTTCAA +
Preference number: 4 (lower is better)
Translates to: VKGGTLTPKLTELLRQHGGPGLR*IFQNVQ
Trigger: TTGAACATTCTGGAAGATTCAGCGGAGTCCAGGCCC...CCCATGCTGCCTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACACAGGATGGTCCCTTTaGGCACTGCGTAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: QGRKEINATNGISISWAHTGWSL*ALRRIS
Trigger: AGAAATTCTACGCAGTGCTCAAAGGGACCATCCTGT...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTTGGGCTTGCTAGGGAGTCGAGGCTaGTGTACTGGGTGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: NQELRASITVLRQASLGLLGSRG*CTGCPA
Trigger: TGCGGGGCACCCAGTACAGCAGCCTCGACTCCCTAG...CAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp ACACCCCAGGATATCCATGGGACAAACGGGGCGGTGCATACACGCTCTATTTTTCTGCACCCCTCTAGCTaGCCATCAACTGACTGGAGC +
Preference number: 4 (lower is better)
Translates to: TPQDIHGTNGAVHTRSIFLHPSS*PSTDWS
Trigger: GCTCCAGTCAGTTGATGGGCAGCTAGAGGGGTGCAG...AAAAATAGAGCGTGTATGCACCGCCCCGTTTGTCCCATGGATATCCTGGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ACACCCCAGGATATCCATGGGACAAACGGGGCGGTGCATACACGCTCTATTTTTCTGGGTAGAGGCTCCTaGAAGCATTGTCCCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TPQDIHGTNGAVHTRSIFLGRGS*KHCPPL
Trigger: CAGAGGGGGACAATGCTTCCAGGAGCCTCTACCCAG...AAAAATAGAGCGTGTATGCACCGCCCCGTTTGTCCCATGGATATCCTGGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ACACCCCAGGATATCCATGGGACAAACGGGGCGGTGCATACACGCTCTATTTTTGGCATCTCCATCTCCTaGGCCCACAGGCTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TPQDIHGTNGAVHTRSIFGISIS*AHRLSA
Trigger: TGCAGAAAGCCTGTGGGCCCAGGAGATGGAGATGCC...AAAAATAGAGCGTGTATGCACCGCCCCGTTTGTCCCATGGATATCCTGGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ACACCCCAGGATATCCATGGGACAAACGGGGCGGTGCATACACGCTCTATTTTTACCCCAGGATATCCATaGGACAAACGGGGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: TPQDIHGTNGAVHTRSIFTPGYP*DKRGGA
Trigger: TGCACCGCCCCGTTTGTCCCATGGATATCCTGGGGT...AAAAATAGAGCGTGTATGCACCGCCCCGTTTGTCCCATGGATATCCTGGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp TTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTCCATCCAACCCCAGCTaGGGGTCCTCAGCATCTGGG +
Preference number: 4 (lower is better)
Translates to: FSHNQELRASITVLRQASPSNPS*GSSASG
Trigger: CCCAGATGCTGAGGACCCTCAGCTGGGGTTGGATGG...AGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp AGAGAAAGACCTGGGAAGACAACAGCCCTTCCAGCTTCTCCAGCGAGGTGGTGTCAGATTATTGTGATGTaGGGCAGGAGACCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RERPGKTTALPASPARWCQIIVM*GRRPGH
Trigger: ATGCCCAGGTCTCCTGCCTCACATCACAATAATCTG...ACACCACCTCGCTGGAGAAGCTGGAAGGGCTGTTGTCTTCCCAGGTCTTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAACTCACAGAACTTTTaGGGCAGCATGGGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: QGRKEINATNGISISWAHNSQNF*GSMGKV
Trigger: TACTTTCCCCATGCTGCCTCAAAAGTTCTGTGAGTT...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp TTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTACAAAATGAGGCCTTTGTGGTTTTGCTaGCAGTCACATGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: FSSEVVSRACTQLAYKMRPLWFC*QSHGPG
Trigger: GCCAGGGCCATGTGACTGGCAGCAAAACCACAAAGG...CCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ACAATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCCTCTAGACCGCTGCTaGTCCCCGCCGCGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: TINNLSFHLFPQPRIKGFPLDRC*SPPRVR
Trigger: CCGGACCCGCGGCGGGGACCAGCAGCGGTCTAGAGG...GAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp TTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTCCCATTCCGGACCCCTaGCTCCTCTTCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FSHNQELRASITVLRQASPIPDP*LLFRLW
Trigger: CCAGAGCCTGAAGAGGAGCCAGGGGTCCGGAATGGG...AGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp TTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTACAAAATGAGGGCACAGGTGAGCGTGTaGATCCCATCTTCCGAAGTG +
Preference number: 4 (lower is better)
Translates to: FSSEVVSRACTQLAYKMRAQVSV*IPSSEV
Trigger: CACTTCGGAAGATGGGATCCACACGCTCACCTGTGC...CCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACTCTTCAGCAGGTCTTTaGCAAAGTCTTGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: QGRKEINATNGISISWAHSSAGL*QSLGHH
Trigger: ATGATGGCCAAGACTTTGCCAAAGACCTGCTGAAGA...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp CAGCTTTACACTGAAAGGGCACAAGCCTGGGTCCCAGATTATTGTGATGTGAGGTGTAGTCAGAGGCCCTaGTGGCCAGAGCGTGATGCA +
Preference number: 4 (lower is better)
Translates to: QLYTERAQAWVPDYCDVRCSQRP*WPERDA
Trigger: TGCATCACGCTCTGGCCACCAGGGCCTCTGACTACA...CCTCACATCACAATAATCTGGGACCCAGGCTTGTGCCCTTTCAGTGTAAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp AACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTTGGGCTTGGCTGGGGTCACTGGCTaGGTTCAGCAACTTGTCCGT +
Preference number: 4 (lower is better)
Translates to: NQELRASITVLRQASLGLAGVTG*VQQLVR
Trigger: ACGGACAAGTTGCTGAACTCAGCCAGTGACCCCAGC...CAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp CAGCTTTACACTGAAAGGGCACAAGCCTGGGTCCCAGATTATTGTGATGTGAGGAGAAGTCGAAGAAACTaGGGTACTCCCCGGCCACCA +
Preference number: 4 (lower is better)
Translates to: QLYTERAQAWVPDYCDVRRSRRN*GTPRPP
Trigger: TGGTGGCCGGGGAGTACCTCAGTTTCTTCGACTTCT...CCTCACATCACAATAATCTGGGACCCAGGCTTGTGCCCTTTCAGTGTAAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp CTTGGTCCAAGTGGCCCCTGGCTGGAATTGTGCTCACTGACCCCACTGGAGACATTGGCAATGAATTGCTaGCAGGACATCTTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LGPSGPWLELCSLTPLETLAMNC*QDIFLP
Trigger: TGGCAAAAAGATGTCCTGTCAGCAATTCATTGCCAA...TGTCTCCAGTGGGGTCAGTGAGCACAATTCCAGCCAGGGGCCACTTGGACCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp AAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAGGCTTTCTCCGCTCCAGATCATCTaGGCCCACTTTGATTTTCAT +
Preference number: 4 (lower is better)
Translates to: KEINATNGISISWAHRLSPLQII*AHFDFH
Trigger: ATGAAAATCAAAGTGGGCTCAGATGATCTGGAGCGG...AGAAAGCCTGTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AGACAGAGTGTCTTTTATTCCTATAGCAGTAGATCTGTCCAAGAGGCCACCTCTCTCCATGGCAGCCACTaGTTCCGCCTGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RQSVFYSYSSRSVQEATSLHGSH*FRLSWL
Trigger: CAGCCAGGACAGGCGGAAGCAGTGGCTGCCATGGAG...AGAGGTGGCCTCTTGGACAGATCTACTGCTATAGGAATAAAAGACACTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp TTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTCACGGGGCGTCCTCTTaGCATCCATGTCAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: FSHNQELRASITVLRQASHGASS*HPCQRE
Trigger: CTCACGCTGACATGGATGGCAAGAGGACGCCCCGTG...AGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp GTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACTTTTGAGGCAGCATGGGTCTTTGGCAAAGTCTTaGCCATCATTCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VKGGTLTPKLTELLRQHGSLAKS*PSFSWS
Trigger: GGACCAGCTGAATGATGGCCAAGACTTTGCCAAAGA...CCCATGCTGCCTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp GTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACTTTTGAGGCAGCATGGGCAGTGGCATCCTTTGTaGTTTTGCTGCCAGTCACAT +
Preference number: 4 (lower is better)
Translates to: VKGGTLTPKLTELLRQHGQWHPL*FCCQSH
Trigger: ATGTGACTGGCAGCAAAACCACAAAGGATGCCACTG...CCCATGCTGCCTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp CAGCTTTACACTGAAAGGGCACAAGCCTGGGTCCCAGATTATTGTGATGTGAGGTCGGGAAGTGAAGGGTaGGACACTGACCCCGAAACT +
Preference number: 4 (lower is better)
Translates to: QLYTERAQAWVPDYCDVRSGSEG*DTDPET
Trigger: AGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGA...CCTCACATCACAATAATCTGGGACCCAGGCTTGTGCCCTTTCAGTGTAAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp TTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTACAAAATGAGGCCTTCAAGAATGTTCTaGGTGCTCCGTCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: FSSEVVSRACTQLAYKMRPSRMF*VLRPES
Trigger: TGACTCTGGACGGAGCACTCAGAACATTCTTGAAGG...CCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp GCCCTTCCAGCTTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTTGTGATCTCAATGGATaGAAAGAAGTGGATGCACAT +
Preference number: 4 (lower is better)
Translates to: ALPASPARWCLEHAHNWPCDLNG*KEVDAH
Trigger: ATGTGCATCCACTTCTTTTCATCCATTGAGATCACA...AGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAAGCTGGAAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp AAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAGGCTTTCTGTGCTAGCTAATCCGTaGTCGTCAAGTGGCAAATTT +
Preference number: 4 (lower is better)
Translates to: KEINATNGISISWAHRLSVLANP*SSSGKF
Trigger: AAATTTGCCACTTGACGATCACGGATTAGCTAGCAC...AGAAAGCCTGTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCAGTGTCCGCTGGGGTaGCCCTTCGCTCGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: NNLSFHLFPQPRIKGFHNQCPLG*PFARAL
Trigger: CAGGGCACGAGCGAAGGGGCACCCCAGCGGACACTG...GTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp TTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTAGGGTCCTCAGCATCTaGGTAGAGGCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FSHNQELRASITVLRQASRVLSI*VEAPGS
Trigger: GCTTCCAGGAGCCTCTACCCAGATGCTGAGGACCCT...AGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AGAGAAAGACCTGGGAAGACAACAGCCCTTCCAGCTTCTCCAGCGAGGTGGTGTCACCCACTTGTCAGTTaGAGAAATGCAGGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: RERPGKTTALPASPARWCHPLVS*RNAGLK
Trigger: TTTAAGCCCTGCATTTCTCCAACTGACAAGTGGGTG...ACACCACCTCGCTGGAGAAGCTGGAAGGGCTGTTGTCTTCCCAGGTCTTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CAA 72 bp GCTTCCATAACCGTCCTCCGACAAGCATCTTTGGGCTaGTTGACAAGCAGCCATTTGCGAGACAGAGTGTCT +
Preference number: 4 (lower is better)
Translates to: ASITVLRQASLG*LTSSHLRDRVS
Trigger: AGACACTCTGTCTCGCAAATGGCTGCTTGTCAACAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp TTGTTGACAAGCAGCCATTTGCGAGACAGAGTGTCTTTTATTCCTATAGCAGTATGTCGCTCTCATCCGTaGGGCTCAGCCCGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: LLTSSHLRDRVSFIPIAVCRSHP*GSARLG
Trigger: CCCTAGACGGGCTGAGCCTCACGGATGAGAGCGACA...TACTGCTATAGGAATAAAAGACACTCTGTCTCGCAAATGGCTGCTTGTCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp GCCCTTCCAGCTTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTGGCTTTTCCTTTATCTaGTTTCATCCTCTAACTGAT +
Preference number: 4 (lower is better)
Translates to: ALPASPARWCLEHAHNWPGFSFI*FHPLTD
Trigger: ATCAGTTAGAGGATGAAATCAGATAAAGGAAAAGCC...AGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAAGCTGGAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp ACAATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCTGTCACGGGCCCGCTaGTGGATGAGGGGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: TINNLSFHLFPQPRIKGFLSRAR*WMRGVR
Trigger: CCTCACACCCCTCATCCAGCAGCGGGCCCGTGACAG...GAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAGGCTTTCTATGAAAAGAAGTGGATaGACATGTGATGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: KEINATNGISISWAHRLSMKRSG*TCDGVS
Trigger: GCTGACTCCATCACATGTGCATCCACTTCTTTTCAT...AGAAAGCCTGTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp GTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACTTTTGAGGCAGCATGGGAGAGCTCTTTTGTGGTaGCACATGGCGTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: VKGGTLTPKLTELLRQHGRALLW*HMAFSI
Trigger: AATTGAAAACGCCATGTGGCACCACAAAAGAGCTCT...CCCATGCTGCCTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCTCCTCTTCAGGCTCTaGACCGGGGTCACGGGTGGC +
Preference number: 4 (lower is better)
Translates to: NNLSFHLFPQPRIKGFHNLLFRL*TGVTGG
Trigger: GCCACCCGTGACCCCGGTCCAGAGCCTGAAGAGGAG...GTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AGACAGAGTGTCTTTTATTCCTATAGCAGTAGATCTGTCCAAGAGGCCACCTCTCATCTGGGTCCTTCGTaGGTTCCTCAGTGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: RQSVFYSYSSRSVQEATSHLGPS*VPQCPL
Trigger: CAGCGGACACTGAGGAACCCACGAAGGACCCAGATG...AGAGGTGGCCTCTTGGACAGATCTACTGCTATAGGAATAAAAGACACTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ACAATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCTCTCAGAGCGGCTGCTaGAGATGGAGCGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: TINNLSFHLFPQPRIKGFSQSGC*RWSAAG
Trigger: CCCTGCGGCGCTCCATCTCCAGCAGCCGCTCTGAGA...GAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp TTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTCGTGATGCACGCGAATaGCGTTCTTCAGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: FSHNQELRASITVLRQASRDARE*RSSGHP
Trigger: AGGGTGACCTGAAGAACGCCATTCGCGTGCATCACG...AGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp TTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTACAAAATGAGGGAAAGGGCACAAGCCTaGGTCCCAGATTATTGTGAT +
Preference number: 4 (lower is better)
Translates to: FSSEVVSRACTQLAYKMRERAQA*VPDYCD
Trigger: ATCACAATAATCTGGGACCCAGGCTTGTGCCCTTTC...CCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp TTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTACAAAATGAGGTCCCAGATGTGGCCTTaGCTAAGCCTTTCTGATTCA +
Preference number: 4 (lower is better)
Translates to: FSSEVVSRACTQLAYKMRSQMWP*LSLSDS
Trigger: TGAATCAGAAAGGCTTAGCCAAGGCCACATCTGGGA...CCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AGAGAAAGACCTGGGAAGACAACAGCCCTTCCAGCTTCTCCAGCGAGGTGGTGTCTGACGCCAAATTCCTaGCCAAACTACAGTAATCTA +
Preference number: 4 (lower is better)
Translates to: RERPGKTTALPASPARWCLTPNS*PNYSNL
Trigger: TAGATTACTGTAGTTTGGCCAGGAATTTGGCGTCAG...ACACCACCTCGCTGGAGAAGCTGGAAGGGCTGTTGTCTTCCCAGGTCTTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ACACCCCAGGATATCCATGGGACAAACGGGGCGGTGCATACACGCTCTATTTTTAACGAAGGGGCCAGATaGTTTGGGTCTAAAACACAC +
Preference number: 4 (lower is better)
Translates to: TPQDIHGTNGAVHTRSIFNEGAR*FGSKTH
Trigger: GTGTGTTTTAGACCCAAACCATCTGGCCCCTTCGTT...AAAAATAGAGCGTGTATGCACCGCCCCGTTTGTCCCATGGATATCCTGGGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp CTCACCCGCCCTCGGGAAGTGAAGGGTGGGACACTGACCCCGAAACTCACAGAATTTTGTGGTGCCACATaGCGTTTTCAATTTCATTTA +
Preference number: 4 (lower is better)
Translates to: LTRPREVKGGTLTPKLTEFCGAT*RFQFHL
Trigger: TAAATGAAATTGAAAACGCCATGTGGCACCACAAAA...TTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CAA 72 bp TTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTaGGGCTTGTTGACAAGCAGCCATTTGCGAGACAGA +
Preference number: 4 (lower is better)
Translates to: LRASITVLRQAS*GLLTSSHLRDR
Trigger: TCTGTCTCGCAAATGGCTGCTTGTCAACAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CAA 72 bp AAGGGTGGGACACTGACCCCGAAACTCACAGAACTTTaGAGGCAGCATGGGGAAAGTACAGAGAGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: KGGTLTPKLTEL*RQHGESTESSF
Trigger: AAAAGAGCTCTCTGTACTTTCCCCATGCTGCCTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp ATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATGGCGGGAGAAGTGTGTaGGGACCCGCTCACGCTCTT +
Preference number: 4 (lower is better)
Translates to: INNLSFHLFPQPRIKGFHGGRSV*GPAHAL
Trigger: AAGAGCGTGAGCGGGTCCTCACACACTTCTCCCGCC...ATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp CAGCTTTACACTGAAAGGGCACAAGCCTGGGTCCCAGATTATTGTGATGTGAGGGGTCCAAGTTGGCAATaGATTGCTGACAGGACATCT +
Preference number: 4 (lower is better)
Translates to: QLYTERAQAWVPDYCDVRGPSWQ*IADRTS
Trigger: AGATGTCCTGTCAGCAATTCATTGCCAACTTGGACC...CCTCACATCACAATAATCTGGGACCCAGGCTTGTGCCCTTTCAGTGTAAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp TTGTTGACAAGCAGCCATTTGCGAGACAGAGTGTCTTTTATTCCTATAGCAGTAGTGGTAGAGACGGCGTaGCAGCCGATGAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLTSSHLRDRVSFIPIAVVVETA*QPMSSF
Trigger: GAAGCTGCTCATCGGCTGGCACGCCGTCTCTACCAC...TACTGCTATAGGAATAAAAGACACTCTGTCTCGCAAATGGCTGCTTGTCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp TTGTTGACAAGCAGCCATTTGCGAGACAGAGTGTCTTTTATTCCTATAGCAGTAGGCCCACAGGCTTTCTaGACCCCTCTAGCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LLTSSHLRDRVSFIPIAVGPQAF*TPLAAH
Trigger: ATGGGCAGCTAGAGGGGTGCAGAAAGCCTGTGGGCC...TACTGCTATAGGAATAAAAGACACTCTGTCTCGCAAATGGCTGCTTGTCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATAACTGCTTCCGCCTGTCCTaGCTGCTCCTGGGACTCCTC +
Preference number: 4 (lower is better)
Translates to: NNLSFHLFPQPRIKGFHNCFRLS*LLLGLL
Trigger: GAGGAGTCCCAGGAGCAGCCAGGACAGGCGGAAGCA...GTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AGACAGAGTGTCTTTTATTCCTATAGCAGTAGATCTGTCCAAGAGGCCACCTCTATGGAAGGCCACATCTaGGTCCTTCGTGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RQSVFYSYSSRSVQEATSMEGHI*VLRGFL
Trigger: GAGGAACCCACGAAGGACCCAGATGTGGCCTTCCAT...AGAGGTGGCCTCTTGGACAGATCTACTGCTATAGGAATAAAAGACACTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ACAATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCGCCATCCCGCACATCTaGCTCCCCGGGACCATCCAA +
Preference number: 4 (lower is better)
Translates to: TINNLSFHLFPQPRIKGFAIPHI*LPGTIQ
Trigger: TTGGATGGTCCCGGGGAGCCAGATGTGCGGGATGGC...GAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp ATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATGAGAGAGGCCAAGGCTaGGGCCATGGAAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: INNLSFHLFPQPRIKGFHERGQG*GHGRPH
Trigger: ATGTGGCCTTCCATGGCCTCAGCCTTGGCCTCTCTC...ATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTTGGGCTTGGACAGGACATCTTTTTaGCAATGTTGTGGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: NQELRASITVLRQASLGLDRTSF*QCCGRA
Trigger: TGCACGGCCACAACATTGGCAAAAAGATGTCCTGTC...CAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp ACAATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCCCACTGGAGACATCTaGCCACCCTGGGGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: TINNLSFHLFPQPRIKGFPTGDI*PPWGLQ
Trigger: TTGCAGACCCCAGGGTGGGCAGATGTCTCCAGTGGG...GAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp CAGCTTTACACTGAAAGGGCACAAGCCTGGGTCCCAGATTATTGTGATGTGAGGTGGCCATCATTCAGCTaGTCCAAGTTGGCAATGAAT +
Preference number: 4 (lower is better)
Translates to: QLYTERAQAWVPDYCDVRWPSFS*SKLAMN
Trigger: ATTCATTGCCAACTTGGACCAGCTGAATGATGGCCA...CCTCACATCACAATAATCTGGGACCCAGGCTTGTGCCCTTTCAGTGTAAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATAGAGGATGGTGCTGGTaGTCGGCAGACCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: INNLSFHLFPQPRIKGFHRGWCW*SADLLL
Trigger: CAGCAGCAGGTCTGCCGACCACCAGCACCATCCTCT...ATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp TTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTGGAGCTCAGAGACCTaGCAGCACCAACATAAAGAC +
Preference number: 4 (lower is better)
Translates to: FSHNQELRASITVLRQASWSSET*QHQHKD
Trigger: GTCTTTATGTTGGTGCTGCCAGGTCTCTGAGCTCCA...AGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp ACACCCCAGGATATCCATGGGACAAACGGGGCGGTGCATACACGCTCTATTTTTAAAAAGGAGGCAGTGTaGTCTCAATGGATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: TPQDIHGTNGAVHTRSIFKKEAV*SQWMKR
Trigger: TCTTTTCATCCATTGAGATCACACTGCCTCCTTTTT...AAAAATAGAGCGTGTATGCACCGCCCCGTTTGTCCCATGGATATCCTGGGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp TTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTGTGGTGTCTAGAGCATaGACACAACTGGCCTACAAA +
Preference number: 4 (lower is better)
Translates to: FSHNQELRASITVLRQASVVSRA*TQLAYK
Trigger: TTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCAC...AGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATAACGGTCGGCAGACCTGCTaGTGGTCAACTCAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: NNLSFHLFPQPRIKGFHNGRQTC*WSTQRK
Trigger: CTTCCTCTGAGTTGACCAGCAGCAGGTCTGCCGACC...GTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATAACTCATCAGGGTTGCACTaGCAGTACCGGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: NNLSFHLFPQPRIKGFHNSSGLH*QYRREK
Trigger: CTTCTCCCGCCGGTACTGCCAGTGCAACCCTGATGA...GTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp TTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTCAAAATGAGGCTCCATaGTGGAGAGGAAAACAAGGG +
Preference number: 4 (lower is better)
Translates to: FSHNQELRASITVLRQASQNEAP*WRGKQG
Trigger: CCCTTGTTTTCCTCTCCACCATGGAGCCTCATTTTG...AGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATCGGCAGACCTGCTGCTaGTCAACTCAGAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: INNLSFHLFPQPRIKGFHRQTCC*STQRKE
Trigger: CTCCTTCCTCTGAGTTGACCAGCAGCAGGTCTGCCG...ATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp TTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTACTTTTGAGGCAGCATaGGGAAAGTACAGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: FSHNQELRASITVLRQASTFEAA*GKYREL
Trigger: GAGCTCTCTGTACTTTCCCCATGCTGCCTCAAAAGT...AGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp ATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATGCCCCGCAGCAGCTCTaGCTCCAGAATCTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: INNLSFHLFPQPRIKGFHAPQQL*LQNLLK
Trigger: TTTGAGAAGATTCTGGAGTCAGAGCTGCTGCGGGGC...ATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp AGACAGAGTGTCTTTTATTCCTATAGCAGTAGATCTGTCCAAGAGGCCACCTCTAACATTTACTTCCTCTaGGCAAAACGAAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RQSVFYSYSSRSVQEATSNIYFL*AKRRGQ
Trigger: CTGGCCCCTTCGTTTTGCTCAGAGGAAGTAAATGTT...AGAGGTGGCCTCTTGGACAGATCTACTGCTATAGGAATAAAAGACACTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATAACGGGAGGCACAACCCATaGTCAGGAAGCACATCTGTC +
Preference number: 4 (lower is better)
Translates to: NNLSFHLFPQPRIKGFHNGRHNP*SGSTSV
Trigger: GACAGATGTGCTTCCTGAGCATGGGTTGTGCCTCCC...GTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATGACATCTGCCCACCCTaGGGTCTGCAAATCCATGTC +
Preference number: 4 (lower is better)
Translates to: INNLSFHLFPQPRIKGFHDICPP*GLQIHV
Trigger: GACATGGATTTGCAGACCCCAGGGTGGGCAGATGTC...ATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ACAATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCTGCCCATCAACTGACTaGAGCTTGGTCCAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: TINNLSFHLFPQPRIKGFCPSTD*SLVQVA
Trigger: GGCCACTTGGACCAAGCTCCAGTCAGTTGATGGGCA...GAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp TTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTCCGTGATCGTCAAGTaGCAAATTTCTCCACTCTTC +
Preference number: 4 (lower is better)
Translates to: FSHNQELRASITVLRQASSVIVK*QISPLF
Trigger: GAAGAGTGGAGAAATTTGCCACTTGACGATCACGGA...AGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp TTGTTGACAAGCAGCCATTTGCGAGACAGAGTGTCTTTTATTCCTATAGCAGTACTCAACTTATTCTCATaGGACCGCAGTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLTSSHLRDRVSFIPIAVLNLFS*DRSCSS
Trigger: GGAGGAGCAACTGCGGTCTCATGAGAATAAGTTGAG...TACTGCTATAGGAATAAAAGACACTCTGTCTCGCAAATGGCTGCTTGTCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp ATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATTGGAATTGTGCTCACTaGCCCCACTGGAGACATCTG +
Preference number: 4 (lower is better)
Translates to: INNLSFHLFPQPRIKGFHWNCAH*PHWRHL
Trigger: CAGATGTCTCCAGTGGGGTCAGTGAGCACAATTCCA...ATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp AATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATAACAACTGGCCTACAAAATaGGGCTCCATGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: NNLSFHLFPQPRIKGFHNNWPTK*GSMVER
Trigger: CCTCTCCACCATGGAGCCTCATTTTGTAGGCCAGTT...GTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp AATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATAACGAGTCAGCTTTACACTaGAAGGGCACAAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NNLSFHLFPQPRIKGFHNESALH*KGTSLG
Trigger: ACCCAGGCTTGTGCCCTTTCAGTGTAAAGCTGACTC...GTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATAACGCGTCACCTTCTTCGTaGCTGTCCCGAACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: NNLSFHLFPQPRIKGFHNASPSS*LSRTCH
Trigger: ATGACAAGTTCGGGACAGGCACGAAGAAGGTGACGC...GTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ACAATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCTCAGGCTGGGGTCACTaGCTGAGTTCAGCAACTTGT +
Preference number: 4 (lower is better)
Translates to: TINNLSFHLFPQPRIKGFSGWGH*LSSATC
Trigger: ACAAGTTGCTGAACTCAGCCAGTGACCCCAGCCTGA...GAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp TTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTGCCTCAAATGTGAGTaGGCCTGTAAAGTTAGATAC +
Preference number: 4 (lower is better)
Translates to: FSHNQELRASITVLRQASCLKCE*ACKVRY
Trigger: GTATCTAACTTTACAGGCCCACTCACATTTGAGGCA...AGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
3UTR CAA 72 bp CGACAAGCATCTTTGGGCTTGTTGACAAGCAGCCATTaGCGAGACAGAGTGTCTTTTATTCCTATAGCAGTA +
Preference number: 4 (lower is better)
Translates to: RQASLGLLTSSH*RDRVSFIPIAV
Trigger: TACTGCTATAGGAATAAAAGACACTCTGTCTCGCAAATGGCTGCTTGTCAACAAGCCCAAAGATGCTTGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp ATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATGGCTTTTCTCGAAGGTaGGATAGTGCTCCTTCAACC +
Preference number: 4 (lower is better)
Translates to: INNLSFHLFPQPRIKGFHGFSRR*DSAPST
Trigger: GGTTGAAGGAGCACTATCTCACCTTCGAGAAAAGCC...ATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp AACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTTGGGCTTGTTGGCTAAGCCTTTCTaGTTCACTAGACAAATGAAA +
Preference number: 4 (lower is better)
Translates to: NQELRASITVLRQASLGLLAKPF*FTRQMK
Trigger: TTTCATTTGTCTAGTGAATCAGAAAGGCTTAGCCAA...CAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp ATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATTCCCATCTTCCGAAGTaGTGTCATCAGGGTTGCACT +
Preference number: 4 (lower is better)
Translates to: INNLSFHLFPQPRIKGFHSHLPK*CHQGCT
Trigger: AGTGCAACCCTGATGACAGCACTTCGGAAGATGGGA...ATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp AATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATAACTTCTTCCTTGCTCGGTaGCTGGAAGAGGAATACCCT +
Preference number: 4 (lower is better)
Translates to: NNLSFHLFPQPRIKGFHNFFLAR*LEEEYP
Trigger: AGGGTATTCCTCTTCCAGGCACCGAGCAAGGAAGAA...GTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR GCA 90 bp ATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATCATCCTTTGTGGTTTTaGTGCCAGTCACATGGCCCT +
Preference number: 4 (lower is better)
Translates to: INNLSFHLFPQPRIKGFHHPLWF*CQSHGP
Trigger: AGGGCCATGTGACTGGCAGCAAAACCACAAAGGATG...ATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ACAATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCTTTTTGCCAATGTTGTaGCCGTGCAGGTCCGTGTTG +
Preference number: 4 (lower is better)
Translates to: TINNLSFHLFPQPRIKGFFLPML*PCRSVL
Trigger: CAACACGGACCTGCACGGCCACAACATTGGCAAAAA...GAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATAACGAGAAGAGAAAGACCTaGGAAGACAACAGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: NNLSFHLFPQPRIKGFHNEKRKT*EDNSPS
Trigger: GGAAGGGCTGTTGTCTTCCCAGGTCTTTCTCTTCTC...GTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp TTGTTGACAAGCAGCCATTTGCGAGACAGAGTGTCTTTTATTCCTATAGCAGTACAGAGAGCTCTTTTGTaGTGCCACATGGCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LLTSSHLRDRVSFIPIAVQRALL*CHMAFS
Trigger: TGAAAACGCCATGTGGCACCACAAAAGAGCTCTCTG...TACTGCTATAGGAATAAAAGACACTCTGTCTCGCAAATGGCTGCTTGTCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp AATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATAACAAGTATCAGGCCCAGTaGCATCCTTTGTGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: NNLSFHLFPQPRIKGFHNKYQAQ*HPLWFC
Trigger: GCAAAACCACAAAGGATGCCACTGGGCCTGATACTT...GTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR TCA 90 bp ACAATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCAAGTGGATGCACATGTaGTGGAGTCAGCTTTACACT +
Preference number: 4 (lower is better)
Translates to: TINNLSFHLFPQPRIKGFKWMHM*WSQLYT
Trigger: AGTGTAAAGCTGACTCCATCACATGTGCATCCACTT...GAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CCA 90 bp ACAATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCGCTCATCCTCATCAATaGCCCATTCCAGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: TINNLSFHLFPQPRIKGFAHPHQ*PIPAFH
Trigger: ATGAAAAGCTGGAATGGGCCATTGATGAGGATGAGC...GAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS GCA 90 bp CCGCCGCCGGTCGGAGCTGCCCGCGCCCGCCCGCGTCCCTTCAGGTaGCGGAGCCGCGATGTGGAGAGGCTGAGCGAGGGGGACGGACGG +
Preference number: 5 (lower is better)
Translates to: PPPVGAARARPRPFR*RSRDVERLSEGDGR
Trigger: CCGTCCGTCCCCCTCGCTCAGCCTCTCCACATCGCGGCTCCGGCACCTGAAGGGACGCGGGCGGGCGCGGGCAGCTCCGACCGGCGGCGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 90 bp GAGGCTGCTGTTCAGGCCCTCACTGGCCATCCCATTCCGGACCCCTaGCTCCTCTTCAGGCTCTGGACCGGGGTCACGGGTGGCATCGCC +
Preference number: 5 (lower is better)
Translates to: EAAVQALTGHPIPDP*LLFRLWTGVTGGIA
Trigger: GGCGATGCCACCCGTGACCCCGGTCCAGAGCCTGAAGAGGAGCCAGGGGTCCGGAATGGGATGGCCAGTGAGGGCCTGAACAGCAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS GCA 90 bp GTTCCTCAGTGTCCGCTGGGGTGCCCCTTCGCTCGTGCCCTGGGCTaGAGAGGCTGCTGTTCAGGCCCTCACTGGCCATCCCATTCCGGA +
Preference number: 5 (lower is better)
Translates to: VPQCPLGCPFARALG*RGCCSGPHWPSHSG
Trigger: TCCGGAATGGGATGGCCAGTGAGGGCCTGAACAGCAGCCTCTGCAGCCCAGGGCACGAGCGAAGGGGCACCCCAGCGGACACTGAGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS TCA 90 bp CCTCGAGGTGGTAGAGACGGCGTGCCAGCCGATGAGCAGCTTCACTaGCCCCCTGGCACCCGTTGGCCAGAGGGTCTGCACTACCAGGCT +
Preference number: 5 (lower is better)
Translates to: PRGGRDGVPADEQLH*PPGTRWPEGLHYQA
Trigger: AGCCTGGTAGTGCAGACCCTCTGGCCAACGGGTGCCAGGGGGTCAGTGAAGCTGCTCATCGGCTGGCACGCCGTCTCTACCACCTCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 90 bp CTCACTGGCCATCCCATTCCGGACCCCTGGCTCCTCTTCAGGCTCTaGACCGGGGTCACGGGTGGCATCGCCTTCCTCAGGCACTGCAGA +
Preference number: 5 (lower is better)
Translates to: LTGHPIPDPWLLFRL*TGVTGGIAFLRHCR
Trigger: TCTGCAGTGCCTGAGGAAGGCGATGCCACCCGTGACCCCGGTCCAGAGCCTGAAGAGGAGCCAGGGGTCCGGAATGGGATGGCCAGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS TCA 90 bp TGGTGCAGGAGGGCAGCAGGGGCCGACAGAACTTCTTCATGGAGCTaGCAGCGGCTGGGAAGGCCGGGGCAGAGAAGATGGCTGCCACCA +
Preference number: 5 (lower is better)
Translates to: WCRRAAGADRTSSWS*QRLGRPGQRRWLPP
Trigger: TGGTGGCAGCCATCTTCTCTGCCCCGGCCTTCCCAGCCGCTGTCAGCTCCATGAAGAAGTTCTGTCGGCCCCTGCTGCCCTCCTGCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 90 bp ATGGAAGGCCACATCTGGGTCCTTCGTGGGTTCCTCAGTGTCCGCTaGGGTGCCCCTTCGCTCGTGCCCTGGGCTGCAGAGGCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: MEGHIWVLRGFLSVR*GAPSLVPWAAEAAV
Trigger: AACAGCAGCCTCTGCAGCCCAGGGCACGAGCGAAGGGGCACCCCAGCGGACACTGAGGAACCCACGAAGGACCCAGATGTGGCCTTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 90 bp CCGGGTCAGGACGCCGTGCTTGTAGGTGGTGGCACTGAGCGCCTGTaGGACATCCAGGAAGGGGTTGCCACCATCCAGGATTCGCGTCAC +
Preference number: 5 (lower is better)
Translates to: PGQDAVLVGGGTERL*DIQEGVATIQDSRH
Trigger: GTGACGCGAATCCTGGATGGTGGCAACCCCTTCCTGGATGTCCCACAGGCGCTCAGTGCCACCACCTACAAGCACGGCGTCCTGACCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS GCA 90 bp ATGAGCAGCTTCACTGACCCCCTGGCACCCGTTGGCCAGAGGGTCTaGACTACCAGGCTCCAACCCCTCCGAGCTGCTGAGCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: MSSFTDPLAPVGQRV*TTRLQPLRAAELRV
Trigger: GACTCTGAGCTCAGCAGCTCGGAGGGGTTGGAGCCTGGTAGTGCAGACCCTCTGGCCAACGGGTGCCAGGGGGTCAGTGAAGCTGCTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 90 bp TCCGGACCCCTGGCTCCTCTTCAGGCTCTGGACCGGGGTCACGGGTaGCATCGCCTTCCTCAGGCACTGCAGATAAGAGCTTGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: SGPLAPLQALDRGHG*HRLPQALQIRACPP
Trigger: AGGAGGACAAGCTCTTATCTGCAGTGCCTGAGGAAGGCGATGCCACCCGTGACCCCGGTCCAGAGCCTGAAGAGGAGCCAGGGGTCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 90 bp GGGCAGCAGGGGCCGACAGAACTTCTTCATGGAGCTGACAGCGGCTaGGAAGGCCGGGGCAGAGAAGATGGCTGCCACCAGGTTGATCCT +
Preference number: 5 (lower is better)
Translates to: GQQGPTELLHGADSG*EGRGREDGCHQVDP
Trigger: AGGATCAACCTGGTGGCAGCCATCTTCTCTGCCCCGGCCTTCCCAGCCGCTGTCAGCTCCATGAAGAAGTTCTGTCGGCCCCTGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp AAGGGCCAGGGAGAGGGTCTGATGCCCGGAGATGCCCAAGGACGCAAGGAGATCAGGCTCCTGGAAGCATaGTCCCCCTCTGCCAGCACG +
Preference number: 5 (lower is better)
Translates to: KGQGEGLMPGDAQGRKEIRLLEA*SPSAST
Trigger: CGTGCTGGCAGAGGGGGACAATGCTTCCAGGAGCCT...GATCTCCTTGCGTCCTTGGGCATCTCCGGGCATCAGACCCTCTCCCTGGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS TCA 90 bp TGGCCAGAGGGTCTGCACTACCAGGCTCCAACCCCTCCGAGCTGCTaGGCTCAGAGTCTGAGTCTGACAGGCCATCCTTCAGGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: WPEGLHYQAPTPPSC*AQSLSLTGHPSGWG
Trigger: ACCCCAGCCTGAAGGATGGCCTGTCAGACTCAGACTCTGAGCTCAGCAGCTCGGAGGGGTTGGAGCCTGGTAGTGCAGACCCTCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS TCA 90 bp TGCTGTCATCAGGGTTGCACTGGCAGTACCGGCGGGAGAAGTGTGTaGGGACCCGCTCACGCTCTTGTGTCTCCCCCATCAGCGGGAAGG +
Preference number: 5 (lower is better)
Translates to: CCHQGCTGSTGGRSV*GPAHALVSPPSAGR
Trigger: CCTTCCCGCTGATGGGGGAGACACAAGAGCGTGAGCGGGTCCTCACACACTTCTCCCGCCGGTACTGCCAGTGCAACCCTGATGACAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274710.4
ENST00000651792.1
CDS CCA 90 bp CCCAGGGCTAGGCCATTGGTGAGAGAGAGGCCAAGGCTGAGGCCATaGAAGGCCACATCTGGGTCCTTCGTGGGTTCCTCAGTGTCCGCT +
Preference number: 5 (lower is better)
Translates to: PRARPLVRERPRLRP*KATSGSFVGSSVSA
Trigger: AGCGGACACTGAGGAACCCACGAAGGACCCAGATGTGGCCTTCCATGGCCTCAGCCTTGGCCTCTCTCTCACCAATGGCCTAGCCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 90 bp CAACCGGTACTCCTCGGCCTCCTTGGACTTGATGCCCCTCTCGACTaGGTGACACCTGTGTTCGGCCAGCTCCGCAGTCAGCTGCCTCAA +
Preference number: 5 (lower is better)
Translates to: QPVLLGLLGLDAPLD*VTPVFGQLRSQLPQ
Trigger: TTGAGGCAGCTGACTGCGGAGCTGGCCGAACACAGGTGTCACCCAGTCGAGAGGGGCATCAAGTCCAAGGAGGCCGAGGAGTACCGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACCTCATGAGACCGCAGTaGCTCCTCCTGGCAGAGGCG +
Preference number: 5 (lower is better)
Translates to: QGRKEINATNGISISWAHLMRPQ*LLLAEA
Trigger: CGCCTCTGCCAGGAGGAGCAACTGCGGTCTCATGAG...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACTCGGCCTCCTTGGACTaGATGCCCCTCTCGACTGGG +
Preference number: 5 (lower is better)
Translates to: QGRKEINATNGISISWAHSASLD*MPLSTG
Trigger: CCCAGTCGAGAGGGGCATCAAGTCCAAGGAGGCCGA...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS TCA 90 bp CTGGGCCCTGAGGGCCATCTTCATGGAATCCATTGGGCATGGCCATaGGAGACAGGCGGCTCAGGACATTCTCAGAGCGGCTGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LGPEGHLHGIHWAWP*ETGGSGHSQSGCWR
Trigger: TCTCCAGCAGCCGCTCTGAGAATGTCCTGAGCCGCCTGTCTCTCATGGCCATGCCCAATGGATTCCATGAAGATGGCCCTCAGGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 90 bp TCATCCGTGAGGCTCAGCCCGTCTAGGGAGTCGAGGCTGCTGTACTaGGTGCCCCGCAGCAGCTCTGACTCCAGAATCTTCTCAAACGTG +
Preference number: 5 (lower is better)
Translates to: SSVRLSPSRESRLLY*VPRSSSDSRIFSNV
Trigger: CACGTTTGAGAAGATTCTGGAGTCAGAGCTGCTGCGGGGCACCCAGTACAGCAGCCTCGACTCCCTAGACGGGCTGAGCCTCACGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 90 bp AGCGTGTGGATCCCATCTTCCGAAGTGCTGTCATCAGGGTTGCACTaGCAGTACCGGCGGGAGAAGTGTGTGAGGACCCGCTCACGCTCT +
Preference number: 5 (lower is better)
Translates to: SVWIPSSEVLSSGLH*QYRREKCVRTRSRS
Trigger: AGAGCGTGAGCGGGTCCTCACACACTTCTCCCGCCGGTACTGCCAGTGCAACCCTGATGACAGCACTTCGGAAGATGGGATCCACACGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274710.4
ENST00000651792.1
CDS-3UTR CAA 90 bp AGAGAAAGACCTGGGAAGACAACAGCCCTTCCAGCTTCTCCAGCGAGGTGGTGTGACCCGCTCACGCTCTaGTGTCTCCCCCATCAGCGG +
Preference number: 5 (lower is better)
Translates to: RERPGKTTALPASPARWCDPLTL*CLPHQR
Trigger: CCGCTGATGGGGGAGACACAAGAGCGTGAGCGGGTC...ACACCACCTCGCTGGAGAAGCTGGAAGGGCTGTTGTCTTCCCAGGTCTTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp CTTGGTCCAAGTGGCCCCTGGCTGGAATTGTGCTCACTGACCCCACTGGAGACATACTCCTCGGCCTCCTaGGACTTGATGCCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: LGPSGPWLELCSLTPLETYSSAS*DLMPLS
Trigger: CGAGAGGGGCATCAAGTCCAAGGAGGCCGAGGAGTA...TGTCTCCAGTGGGGTCAGTGAGCACAATTCCAGCCAGGGGCCACTTGGACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS GCA 90 bp CATGGAGCTGACAGCGGCTGGGAAGGCCGGGGCAGAGAAGATGGCTaGCACCAGGTTGATCCTGAGGATCCAGGACAGCATTTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: HGADSGWEGRGREDG*HQVDPEDPGQHFFL
Trigger: AAGGAAGAAATGCTGTCCTGGATCCTCAGGATCAACCTGGTGGCAGCCATCTTCTCTGCCCCGGCCTTCCCAGCCGCTGTCAGCTCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 90 bp GGCTTGAATGTGTCTTCCGGAGAGAAGGGTCATCCCCTTCCAGAGTaGCCAGCCGGGCCTCAATCCGCTCCAGATCATCTGAGCCCACTT +
Preference number: 5 (lower is better)
Translates to: GLNVSSGEKGHPLPE*PAGPQSAPDHLSPL
Trigger: AAGTGGGCTCAGATGATCTGGAGCGGATTGAGGCCCGGCTGGCCACTCTGGAAGGGGATGACCCTTCTCTCCGGAAGACACATTCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp CTCACCCGCCCTCGGGAAGTGAAGGGTGGGACACTGACCCCGAAACTCACAGAAACTGCAGATAAGAGCTaGTCCTCCTCCATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LTRPREVKGGTLTPKLTETADKS*SSSMAA
Trigger: GGCTGCCATGGAGGAGGACAAGCTCTTATCTGCAGT...TTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACGTGCCTGTCCCGAACTaGTCATCCACCAGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: QGRKEINATNGISISWAHVPVPN*SSTSSD
Trigger: GTCTGAGCTGGTGGATGACAAGTTCGGGACAGGCAC...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS GCA 90 bp CCAGGAAGGGGTTGCCACCATCCAGGATTCGCGTCACCTTCTTCGTaGCTGTCCCGAACTTGTCATCCACCAGCTCAGACAGGGATTTCC +
Preference number: 5 (lower is better)
Translates to: PGRGCHHPGFASPSS*LSRTCHPPAQTGIS
Trigger: GGAAATCCCTGTCTGAGCTGGTGGATGACAAGTTCGGGACAGGCACGAAGAAGGTGACGCGAATCCTGGATGGTGGCAACCCCTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 90 bp GTATCAGGCCCAGTGGCATCCTTTGTGGTTTTGCTGCCAGTCACATaGCCCTGGCTGAGGGCAGGGCTTGAATGTGTCTTCCGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: VSGPVASFVVLLPVT*PWLRAGLECVFRRE
Trigger: TTCTCTCCGGAAGACACATTCAAGCCCTGCCCTCAGCCAGGGCCATGTGACTGGCAGCAAAACCACAAAGGATGCCACTGGGCCTGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp CAGCTTTACACTGAAAGGGCACAAGCCTGGGTCCCAGATTATTGTGATGTGAGGACCCCCTGGCACCCGTaGGCCAGAGGGTCTGCACTA +
Preference number: 5 (lower is better)
Translates to: QLYTERAQAWVPDYCDVRTPWHP*ARGSAL
Trigger: TAGTGCAGACCCTCTGGCCAACGGGTGCCAGGGGGT...CCTCACATCACAATAATCTGGGACCCAGGCTTGTGCCCTTTCAGTGTAAAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACCTCCGACAAGCATCTTaGGGCTTGTTGACAAGCAGC +
Preference number: 5 (lower is better)
Translates to: QGRKEINATNGISISWAHLRQAS*GLLTSS
Trigger: GCTGCTTGTCAACAAGCCCAAAGATGCTTGTCGGAG...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS TCA 90 bp CCCTTCCAGAGTGGCCAGCCGGGCCTCAATCCGCTCCAGATCATCTaGGCCCACTTTGATTTTCATAGCCAGGAGGTGGATATAGGTCTC +
Preference number: 5 (lower is better)
Translates to: PFQSGQPGLNPLQII*AHFDFHSQEVDIGL
Trigger: GAGACCTATATCCACCTCCTGGCTATGAAAATCAAAGTGGGCTCAGATGATCTGGAGCGGATTGAGGCCCGGCTGGCCACTCTGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACTCTTCATGGAATCCATaGGGCATGGCCATGAGAGAC +
Preference number: 5 (lower is better)
Translates to: QGRKEINATNGISISWAHSSWNP*GMAMRD
Trigger: GTCTCTCATGGCCATGCCCAATGGATTCCATGAAGA...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACGTCTTTGGCAAAGTCTaGGCCATCATTCAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: QGRKEINATNGISISWAHVFGKV*AIIQLV
Trigger: GACCAGCTGAATGATGGCCAAGACTTTGCCAAAGAC...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACGTCTTCAGCAGGTCTTaGGCAAAGTCTTGGCCATCA +
Preference number: 5 (lower is better)
Translates to: QGRKEINATNGISISWAHVFSRS*AKSWPS
Trigger: TGATGGCCAAGACTTTGCCAAAGACCTGCTGAAGAC...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp TTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTACAAAATGAGGTCAACTGACTGGAGCTaGGTCCAAGTGGCCCCTGGC +
Preference number: 5 (lower is better)
Translates to: FSSEVVSRACTQLAYKMRSTDWS*VQVAPG
Trigger: GCCAGGGGCCACTTGGACCAAGCTCCAGTCAGTTGA...CCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp CAAGGACGCAAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAAGGGGCCAGATGGTTaGGGTCTAAAACACACTTCA +
Preference number: 5 (lower is better)
Translates to: QGRKEINATNGISISWAHKGPDG*GLKHTS
Trigger: TGAAGTGTGTTTTAGACCCAAACCATCTGGCCCCTT...GTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTTGCGTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp TTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTACAAAATGAGGGCCCAGTGGCATCCTTaGTGGTTTTGCTGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: FSSEVVSRACTQLAYKMRAQWHP*WFCCQS
Trigger: TGACTGGCAGCAAAACCACAAAGGATGCCACTGGGC...CCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp GTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACTTTTGAGGCAGCATGGGGTACAGAGAGCTCTTTaGTGGTGCCACATGGCGTTT +
Preference number: 5 (lower is better)
Translates to: VKGGTLTPKLTELLRQHGVQRAL*WCHMAF
Trigger: AAACGCCATGTGGCACCACAAAAGAGCTCTCTGTAC...CCCATGCTGCCTCAAAAGTTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp TTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTACAAAATGAGGGCTGAGTTCAGCAACTaGTCCGTGTCCTCCTCATCA +
Preference number: 5 (lower is better)
Translates to: FSSEVVSRACTQLAYKMRAEFSN*SVSSSS
Trigger: TGATGAGGAGGACACGGACAAGTTGCTGAACTCAGC...CCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp TTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTACAAAATGAGGATCTTTTTGCCAATGTaGTGGCCGTGCAGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: FSSEVVSRACTQLAYKMRIFLPM*WPCRSV
Trigger: CACGGACCTGCACGGCCACAACATTGGCAAAAAGAT...CCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp CTCACCCGCCCTCGGGAAGTGAAGGGTGGGACACTGACCCCGAAACTCACAGAACAAGTTGGCAATGAATaGCTGACAGGACATCTTTTT +
Preference number: 5 (lower is better)
Translates to: LTRPREVKGGTLTPKLTEQVGNE*LTGHLF
Trigger: AAAAAGATGTCCTGTCAGCAATTCATTGCCAACTTG...TTCTGTGAGTTTCGGGGTCAGTGTCCCACCCTTCACTTCCCGAGGGCGGGTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp TTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTACATCCAGGAAGGGGTaGCCACCATCCAGGATTCGC +
Preference number: 5 (lower is better)
Translates to: FSHNQELRASITVLRQASTSRKG*PPSRIR
Trigger: GCGAATCCTGGATGGTGGCAACCCCTTCCTGGATGT...AGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp AACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTTGGGCTTGCCCTCCGATAGAGCTTaGTCAGGCCTGTACTCATCC +
Preference number: 5 (lower is better)
Translates to: NQELRASITVLRQASLGLPSDRA*SGLYSS
Trigger: GGATGAGTACAGGCCTGACAAAGCTCTATCGGAGGG...CAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp AACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTTTGGGCTTGGACAGCATTTCTTCCTaGCTCGGTGCCTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: NQELRASITVLRQASLGLDSISS*LGAWKR
Trigger: CCTCTTCCAGGCACCGAGCAAGGAAGAAATGCTGTC...CAAGCCCAAAGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp AAGGAGATCAACGCCACAAACGGCATCTCCATCTCCTGGGCCCACAGGCTTTCTAAACTCACAGAACTTTaGAGGCAGCATGGGGAAAGT +
Preference number: 5 (lower is better)
Translates to: KEINATNGISISWAHRLSKLTEL*RQHGES
Trigger: ACTTTCCCCATGCTGCCTCAAAAGTTCTGTGAGTTT...AGAAAGCCTGTGGGCCCAGGAGATGGAGATGCCGTTTGTGGCGTTGATCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp AGACAGAGTGTCTTTTATTCCTATAGCAGTAGATCTGTCCAAGAGGCCACCTCTCTAAACTCGTTGTTCTaGCCCAGCTGCCGGGCCACA +
Preference number: 5 (lower is better)
Translates to: RQSVFYSYSSRSVQEATSLNSLF*PSCRAT
Trigger: TGTGGCCCGGCAGCTGGGCAAGAACAACGAGTTTAG...AGAGGTGGCCTCTTGGACAGATCTACTGCTATAGGAATAAAAGACACTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp TTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTACAAAATGAGGCAAGCATCTTTGGGCTaGTTGACAAGCAGCCATTTG +
Preference number: 5 (lower is better)
Translates to: FSSEVVSRACTQLAYKMRQASLG*LTSSHL
Trigger: CAAATGGCTGCTTGTCAACAAGCCCAAAGATGCTTG...CCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp ATCAATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATGTGCTGTCATCAGGGTaGCACTGGCAGTACCGGCGG +
Preference number: 5 (lower is better)
Translates to: INNLSFHLFPQPRIKGFHVLSSG*HWQYRR
Trigger: CCGCCGGTACTGCCAGTGCAACCCTGATGACAGCAC...ATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp TTCTCCAGCGAGGTGGTGTCTAGAGCATGCACACAACTGGCCTACAAAATGAGGTTGACAAGCAGCCATTaGCGAGACAGAGTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: FSSEVVSRACTQLAYKMRLTSSH*RDRVSF
Trigger: AAAAGACACTCTGTCTCGCAAATGGCTGCTTGTCAA...CCTCATTTTGTAGGCCAGTTGTGTGCATGCTCTAGACACCACCTCGCTGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp TTTTCCCACAACCAAGAATTAAGGGCTTCCATAACCGTCCTCCGACAAGCATCTGCATCTTTGGGCTTGTaGACAAGCAGCCATTTGCGA +
Preference number: 5 (lower is better)
Translates to: FSHNQELRASITVLRQASASLGL*TSSHLR
Trigger: TCGCAAATGGCTGCTTGTCAACAAGCCCAAAGATGC...AGATGCTTGTCGGAGGACGGTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS-3UTR CAA 90 bp AATAACTTGTCATTCCACCTTTTCCCACAACCAAGAATTAAGGGCTTCCATAACGCATCCTTTGTGGTTTaGCTGCCAGTCACATGGCCC +
Preference number: 5 (lower is better)
Translates to: NNLSFHLFPQPRIKGFHNASFVV*LPVTWP
Trigger: GGGCCATGTGACTGGCAGCAAAACCACAAAGGATGC...GTTATGGAAGCCCTTAATTCTTGGTTGTGGGAAAAGGTGGAATGACAAGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS GCA 72 bp GTCGGAGCTGCCCGCGCCCGCCCGCGTCCCTTCAGGTaGCGGAGCCGCGATGTGGAGAGGCTGAGCGAGGGG +
Preference number: 6 (lower is better)
Translates to: VGAARARPRPFR*RSRDVERLSEG
Trigger: CCCCTCGCTCAGCCTCTCCACATCGCGGCTCCGGCACCTGAAGGGACGCGGGCGGGCGCGGGCAGCTCCGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 72 bp CTCAGTGTCCGCTGGGGTGCCCCTTCGCTCGTGCCCTaGGCTGCAGAGGCTGCTGTTCAGGCCCTCACTGGC +
Preference number: 6 (lower is better)
Translates to: LSVRWGAPSLVP*AAEAAVQALTG
Trigger: GCCAGTGAGGGCCTGAACAGCAGCCTCTGCAGCCCAGGGCACGAGCGAAGGGGCACCCCAGCGGACACTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 72 bp GGCGGCTCAGGACATTCTCAGAGCGGCTGCTGGAGATaGAGCGCCGCAGGGGGCTGCCCAGCTCCCCATCAC +
Preference number: 6 (lower is better)
Translates to: GGSGHSQSGCWR*SAAGGCPAPHH
Trigger: GTGATGGGGAGCTGGGCAGCCCCCTGCGGCGCTCCATCTCCAGCAGCCGCTCTGAGAATGTCCTGAGCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS GCA 72 bp GGGTGCCCCTTCGCTCGTGCCCTGGGCTGCAGAGGCTaGTGTTCAGGCCCTCACTGGCCATCCCATTCCGGA +
Preference number: 6 (lower is better)
Translates to: GCPFARALGCRG*CSGPHWPSHSG
Trigger: TCCGGAATGGGATGGCCAGTGAGGGCCTGAACAGCAGCCTCTGCAGCCCAGGGCACGAGCGAAGGGGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS GCA 72 bp TCCTCCATGGCAGCCACTGCTTCCGCCTGTCCTGGCTaGTCCTGGGACTCCTCTAGACCGCTGCTGGTCCCC +
Preference number: 6 (lower is better)
Translates to: SSMAATASACPG*SWDSSRPLLVP
Trigger: GGGGACCAGCAGCGGTCTAGAGGAGTCCCAGGAGCAGCCAGGACAGGCGGAAGCAGTGGCTGCCATGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 72 bp GTTCAGGCCCTCACTGGCCATCCCATTCCGGACCCCTaGCTCCTCTTCAGGCTCTGGACCGGGGTCACGGGT +
Preference number: 6 (lower is better)
Translates to: VQALTGHPIPDP*LLFRLWTGVTG
Trigger: ACCCGTGACCCCGGTCCAGAGCCTGAAGAGGAGCCAGGGGTCCGGAATGGGATGGCCAGTGAGGGCCTGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 72 bp CACATCTGGGTCCTTCGTGGGTTCCTCAGTGTCCGCTaGGGTGCCCCTTCGCTCGTGCCCTGGGCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: HIWVLRGFLSVR*GAPSLVPWAAE
Trigger: CTCTGCAGCCCAGGGCACGAGCGAAGGGGCACCCCAGCGGACACTGAGGAACCCACGAAGGACCCAGATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS GCA 72 bp TTCACTGACCCCCTGGCACCCGTTGGCCAGAGGGTCTaGACTACCAGGCTCCAACCCCTCCGAGCTGCTGAG +
Preference number: 6 (lower is better)
Translates to: FTDPLAPVGQRV*TTRLQPLRAAE
Trigger: CTCAGCAGCTCGGAGGGGTTGGAGCCTGGTAGTGCAGACCCTCTGGCCAACGGGTGCCAGGGGGTCAGTGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS TCA 72 bp TCGGCCTCCTTGGACTTGATGCCCCTCTCGACTGGGTaGCACCTGTGTTCGGCCAGCTCCGCAGTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SASLDLMPLSTG*HLCSASSAVSC
Trigger: GCAGCTGACTGCGGAGCTGGCCGAACACAGGTGTCACCCAGTCGAGAGGGGCATCAAGTCCAAGGAGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS GCA 72 bp GCCACCAGCCTGCTAAACTCGTTGTTCTTGCCCAGCTaGCGGGCCACATCACAGCGCTGGAAGCCCTCGAGG +
Preference number: 6 (lower is better)
Translates to: ATSLLNSLFLPS*RATSQRWKPSR
Trigger: CCTCGAGGGCTTCCAGCGCTGTGATGTGGCCCGGCAGCTGGGCAAGAACAACGAGTTTAGCAGGCTGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 72 bp CTTCTCAAACGTGGCGCTGAAGCCATCCCGCACATCTaGCTCCCCGGGACCATCCAACCCCAGCTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: LLKRGAEAIPHI*LPGTIQPQLRV
Trigger: GACCCTCAGCTGGGGTTGGATGGTCCCGGGGAGCCAGATGTGCGGGATGGCTTCAGCGCCACGTTTGAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 72 bp GGGCCGACAGAACTTCTTCATGGAGCTGACAGCGGCTaGGAAGGCCGGGGCAGAGAAGATGGCTGCCACCAG +
Preference number: 6 (lower is better)
Translates to: GPTELLHGADSG*EGRGREDGCHQ
Trigger: CTGGTGGCAGCCATCTTCTCTGCCCCGGCCTTCCCAGCCGCTGTCAGCTCCATGAAGAAGTTCTGTCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 72 bp CTCCTCGGCCTCCTTGGACTTGATGCCCCTCTCGACTaGGTGACACCTGTGTTCGGCCAGCTCCGCAGTCAG +
Preference number: 6 (lower is better)
Translates to: LLGLLGLDAPLD*VTPVFGQLRSQ
Trigger: CTGACTGCGGAGCTGGCCGAACACAGGTGTCACCCAGTCGAGAGGGGCATCAAGTCCAAGGAGGCCGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CAA 90 bp GGGTCACGGGTGGCATCGCCTTCCTCAGGCACTGCAGATAAGAGCTaGTCCTCCTCCATGGCAGCCACTGCTTCCGCCTGTCCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: GSRVASPSSGTADKS*SSSMAATASACPGC
Trigger: GCAGCCAGGACAGGCGGAAGCAGTGGCTGCCATGGAGGAGGACAAGCTCTTATCTGCAGTGCCTGAGGAAGGCGATGCCACCCGTGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS TCA 72 bp CAGGGTTGCACTGGCAGTACCGGCGGGAGAAGTGTGTaGGGACCCGCTCACGCTCTTGTGTCTCCCCCATCA +
Preference number: 6 (lower is better)
Translates to: QGCTGSTGGRSV*GPAHALVSPPS
Trigger: TGATGGGGGAGACACAAGAGCGTGAGCGGGTCCTCACACACTTCTCCCGCCGGTACTGCCAGTGCAACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274710.4
ENST00000651792.1
CDS CCA 72 bp CTGGCTCCTCTTCAGGCTCTGGACCGGGGTCACGGGTaGCATCGCCTTCCTCAGGCACTGCAGATAAGAGCT +
Preference number: 6 (lower is better)
Translates to: LAPLQALDRGHG*HRLPQALQIRA
Trigger: AGCTCTTATCTGCAGTGCCTGAGGAAGGCGATGCCACCCGTGACCCCGGTCCAGAGCCTGAAGAGGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 72 bp AGAGAGGCCAAGGCTGAGGCCATGGAAGGCCACATCTaGGTCCTTCGTGGGTTCCTCAGTGTCCGCTGGGGT +
Preference number: 6 (lower is better)
Translates to: REAKAEAMEGHI*VLRGFLSVRWG
Trigger: ACCCCAGCGGACACTGAGGAACCCACGAAGGACCCAGATGTGGCCTTCCATGGCCTCAGCCTTGGCCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 72 bp GGGACCATCCAACCCCAGCTGAGGGTCCTCAGCATCTaGGTAGAGGCTCCTGGAAGCATTGTCCCCCTCTGC +
Preference number: 6 (lower is better)
Translates to: GTIQPQLRVLSI*VEAPGSIVPLC
Trigger: GCAGAGGGGGACAATGCTTCCAGGAGCCTCTACCCAGATGCTGAGGACCCTCAGCTGGGGTTGGATGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 72 bp AGGCTCAGCCCGTCTAGGGAGTCGAGGCTGCTGTACTaGGTGCCCCGCAGCAGCTCTGACTCCAGAATCTTC +
Preference number: 6 (lower is better)
Translates to: RLSPSRESRLLY*VPRSSSDSRIF
Trigger: GAAGATTCTGGAGTCAGAGCTGCTGCGGGGCACCCAGTACAGCAGCCTCGACTCCCTAGACGGGCTGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CAA 72 bp CCGGCGGGAGAAGTGTGTGAGGACCCGCTCACGCTCTaGTGTCTCCCCCATCAGCGGGAAGGCCTTCAAGAA +
Preference number: 6 (lower is better)
Translates to: PAGEVCEDPLTL*CLPHQREGLQE
Trigger: TTCTTGAAGGCCTTCCCGCTGATGGGGGAGACACAAGAGCGTGAGCGGGTCCTCACACACTTCTCCCGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000274710.4
ENST00000651792.1
CDS CAA 90 bp ACAGCGGCTGGGAAGGCCGGGGCAGAGAAGATGGCTGCCACCAGGTaGATCCTGAGGATCCAGGACAGCATTTCTTCCTTGCTCGGTGCC +
Preference number: 6 (lower is better)
Translates to: TAAGKAGAEKMAATR*ILRIQDSISSLLGA
Trigger: GGCACCGAGCAAGGAAGAAATGCTGTCCTGGATCCTCAGGATCAACCTGGTGGCAGCCATCTTCTCTGCCCCGGCCTTCCCAGCCGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS TCA 72 bp GCTCCTTCAACCGGTACTCCTCGGCCTCCTTGGACTTaGTGCCCCTCTCGACTGGGTGACACCTGTGTTCGG +
Preference number: 6 (lower is better)
Translates to: APSTGTPRPPWT*CPSRLGDTCVR
Trigger: CCGAACACAGGTGTCACCCAGTCGAGAGGGGCATCAAGTCCAAGGAGGCCGAGGAGTACCGGTTGAAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CAA 72 bp GTGGCACTGAGCGCCTGTGGGACATCCAGGAAGGGGTaGCCACCATCCAGGATTCGCGTCACCTTCTTCGTG +
Preference number: 6 (lower is better)
Translates to: VALSACGTSRKG*PPSRIRVTFFV
Trigger: CACGAAGAAGGTGACGCGAATCCTGGATGGTGGCAACCCCTTCCTGGATGTCCCACAGGCGCTCAGTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CAA 90 bp CTGGCAGTACCGGCGGGAGAAGTGTGTGAGGACCCGCTCACGCTCTaGTGTCTCCCCCATCAGCGGGAAGGCCTTCAAGAATGTTCTGAG +
Preference number: 6 (lower is better)
Translates to: LAVPAGEVCEDPLTL*CLPHQREGLQECSE
Trigger: CTCAGAACATTCTTGAAGGCCTTCCCGCTGATGGGGGAGACACAAGAGCGTGAGCGGGTCCTCACACACTTCTCCCGCCGGTACTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CAA 90 bp CAGGTGAGCGTGTGGATCCCATCTTCCGAAGTGCTGTCATCAGGGTaGCACTGGCAGTACCGGCGGGAGAAGTGTGTGAGGACCCGCTCA +
Preference number: 6 (lower is better)
Translates to: QVSVWIPSSEVLSSG*HWQYRREKCVRTRS
Trigger: TGAGCGGGTCCTCACACACTTCTCCCGCCGGTACTGCCAGTGCAACCCTGATGACAGCACTTCGGAAGATGGGATCCACACGCTCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274710.4
ENST00000651792.1
CDS CCA 72 bp AGGCCATTGGTGAGAGAGAGGCCAAGGCTGAGGCCATaGAAGGCCACATCTGGGTCCTTCGTGGGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: RPLVRERPRLRP*KATSGSFVGSS
Trigger: TGAGGAACCCACGAAGGACCCAGATGTGGCCTTCCATGGCCTCAGCCTTGGCCTCTCTCTCACCAATGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 72 bp ATCCCATCTTCCGAAGTGCTGTCATCAGGGTTGCACTaGCAGTACCGGCGGGAGAAGTGTGTGAGGACCCGC +
Preference number: 6 (lower is better)
Translates to: IPSSEVLSSGLH*QYRREKCVRTR
Trigger: GCGGGTCCTCACACACTTCTCCCGCCGGTACTGCCAGTGCAACCCTGATGACAGCACTTCGGAAGATGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274710.4
ENST00000651792.1
CDS CCA 72 bp CAGAGGCCCTGGTGGCCAGAGCGTGATGCACGCGAATaGCGTTCTTCAGGTCACCCTCCGATAGAGCTTTGT +
Preference number: 6 (lower is better)
Translates to: QRPWWPERDARE*RSSGHPPIELC
Trigger: ACAAAGCTCTATCGGAGGGTGACCTGAAGAACGCCATTCGCGTGCATCACGCTCTGGCCACCAGGGCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CAA 72 bp GTGTGGATCCCATCTTCCGAAGTGCTGTCATCAGGGTaGCACTGGCAGTACCGGCGGGAGAAGTGTGTGAGG +
Preference number: 6 (lower is better)
Translates to: VWIPSSEVLSSG*HWQYRREKCVR
Trigger: CCTCACACACTTCTCCCGCCGGTACTGCCAGTGCAACCCTGATGACAGCACTTCGGAAGATGGGATCCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274710.4
ENST00000651792.1
CDS CAA 72 bp GGGAAGGCCGGGGCAGAGAAGATGGCTGCCACCAGGTaGATCCTGAGGATCCAGGACAGCATTTCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: GKAGAEKMAATR*ILRIQDSISSL
Trigger: CAAGGAAGAAATGCTGTCCTGGATCCTCAGGATCAACCTGGTGGCAGCCATCTTCTCTGCCCCGGCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS GCA 72 bp GGTTGCCACCATCCAGGATTCGCGTCACCTTCTTCGTaGCTGTCCCGAACTTGTCATCCACCAGCTCAGACA +
Preference number: 6 (lower is better)
Translates to: GCHHPGFASPSS*LSRTCHPPAQT
Trigger: TGTCTGAGCTGGTGGATGACAAGTTCGGGACAGGCACGAAGAAGGTGACGCGAATCCTGGATGGTGGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CCA 72 bp CCAGTGGCATCCTTTGTGGTTTTGCTGCCAGTCACATaGCCCTGGCTGAGGGCAGGGCTTGAATGTGTCTTC +
Preference number: 6 (lower is better)
Translates to: PVASFVVLLPVT*PWLRAGLECVF
Trigger: GAAGACACATTCAAGCCCTGCCCTCAGCCAGGGCCATGTGACTGGCAGCAAAACCACAAAGGATGCCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS TCA 72 bp AGTGGCCAGCCGGGCCTCAATCCGCTCCAGATCATCTaGGCCCACTTTGATTTTCATAGCCAGGAGGTGGAT +
Preference number: 6 (lower is better)
Translates to: SGQPGLNPLQII*AHFDFHSQEVD
Trigger: ATCCACCTCCTGGCTATGAAAATCAAAGTGGGCTCAGATGATCTGGAGCGGATTGAGGCCCGGCTGGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CAA 72 bp AGGATTCGCGTCACCTTCTTCGTGCCTGTCCCGAACTaGTCATCCACCAGCTCAGACAGGGATTTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: RIRVTFFVPVPN*SSTSSDRDFLS
Trigger: GCTGAGGAAATCCCTGTCTGAGCTGGTGGATGACAAGTTCGGGACAGGCACGAAGAAGGTGACGCGAATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CAA 72 bp CGAATGGCGTTCTTCAGGTCACCCTCCGATAGAGCTTaGTCAGGCCTGTACTCATCCTTCTGCAGGTACAGG +
Preference number: 6 (lower is better)
Translates to: RMAFFRSPSDRA*SGLYSSFCRYR
Trigger: CCTGTACCTGCAGAAGGATGAGTACAGGCCTGACAAAGCTCTATCGGAGGGTGACCTGAAGAACGCCATTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS TCA 72 bp CCATCATTCAGCTGGTCCAAGTTGGCAATGAATTGCTaGCAGGACATCTTTTTGCCAATGTTGTGGCCGTGC +
Preference number: 6 (lower is better)
Translates to: PSFSWSKLAMNC*QDIFLPMLWPC
Trigger: GCACGGCCACAACATTGGCAAAAAGATGTCCTGTCAGCAATTCATTGCCAACTTGGACCAGCTGAATGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS TCA 72 bp CCATCATTCAGCTGGTCCAAGTTGGCAATGAATTGCTaGCAGGACATCTTTTTGCCAATGTTCACGTGGCCG +
Preference number: 6 (lower is better)
Translates to: PSFSWSKLAMNC*QDIFLPMFTWP
Trigger: CGGCCACGTGAACATTGGCAAAAAGATGTCCTGTCAGCAATTCATTGCCAACTTGGACCAGCTGAATGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651792.1
CDS CAA 90 bp CTTGATGGAGTTGTAAAGGGTCTTCAGCAGGTCTTTGGCAAAGTCTaGGCCATCATTCAGCTGGTCCAAGTTGGCAATGAATTGCTGACA +
Preference number: 6 (lower is better)
Translates to: LDGVVKGLQQVFGKV*AIIQLVQVGNELLT
Trigger: TGTCAGCAATTCATTGCCAACTTGGACCAGCTGAATGATGGCCAAGACTTTGCCAAAGACCTGCTGAAGACCCTTTACAACTCCATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274710.4
ENST00000651792.1
CDS CAA 72 bp TTGGCCATCATTCAGCTGGTCCAAGTTGGCAATGAATaGCTGACAGGACATCTTTTTGCCAATGTTGTGGCC +
Preference number: 6 (lower is better)
Translates to: LAIIQLVQVGNE*LTGHLFANVVA
Trigger: GGCCACAACATTGGCAAAAAGATGTCCTGTCAGCAATTCATTGCCAACTTGGACCAGCTGAATGATGGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000274710.4
CDS CAA 72 bp GTTGTAAAGGGTCTTCAGCAGGTCTTTGGCAAAGTCTaGGCCATCATTCAGCTGGTCCAAGTTGGCAATGAA +
Preference number: 6 (lower is better)
Translates to: VVKGLQQVFGKV*AIIQLVQVGNE
Trigger: TTCATTGCCAACTTGGACCAGCTGAATGATGGCCAAGACTTTGCCAAAGACCTGCTGAAGACCCTTTACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000274710.4
ENST00000651792.1
CDS CAA 72 bp TTGGCCATCATTCAGCTGGTCCAAGTTGGCAATGAATaGCTGACAGGACATCTTTTTGCCAATGTTCACGTG +
Preference number: 6 (lower is better)
Translates to: LAIIQLVQVGNE*LTGHLFANVHV
Trigger: CACGTGAACATTGGCAAAAAGATGTCCTGTCAGCAATTCATTGCCAACTTGGACCAGCTGAATGATGGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651792.1