RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PSD (Homo sapiens)

Ensembl gene IDs: ENSG00000059915

Ensembl transcript IDs: ENST00000020673.6, ENST00000406432.5, ENST00000461698.5, ENST00000472685.5, ENST00000473507.1, ENST00000479172.5, ENST00000488194.1, ENST00000492902.2, ENST00000611678.4

Found 495 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCCCCCGGCCCAGGTATaGGGCCTTGGCATGGACGCCCTTCCTCCACCTCCAGCAAGAGAA +
Preference number: 1 (lower is better)
Translates to: TEAGESQAVLPPAQV*GLGMDALPPPPARE
Trigger: TTCTCTTGCTGGAGGTGGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCTGGCTTTCCCCCGCTTCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR CCA 90 bp ATGGACGCCCTTCCTCCACCTCCAGCAAGAGAAAGAGTAAGCCCTTaGGGAGGAAGGAGGGGAAACCAGCTCAGCCCCAAATCCTGGTCT +
Preference number: 1 (lower is better)
Translates to: MDALPPPPARERVSP*GGRRGNQLSPKSWS
Trigger: AGACCAGGATTTGGGGCTGAGCTGGTTTCCCCTCCTTCCTCCCCAAGGGCTTACTCTTTCTCTTGCTGGAGGTGGAGGAAGGGCGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR TCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCAGGACAGAGGGGGACTaGTGGTGTCAGGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLRTEGD*WCQGGG
Trigger: ACCCCCACCCTGACACCATCAGTCCCCCTCTGTCCT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCCCCCGGCCCAGGTATaGGGCCTTGGCATGGACGCC +
Preference number: 2 (lower is better)
Translates to: GVEAVQRARPTEAGESQAPPAQV*GLGMDA
Trigger: GGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
69% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCTCAGCCCCAAATCCTaGTCTCTGTCCAAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSLSPKS*SLSKPG
Trigger: GCCTGGCTTGGACAGAGACCAGGATTTGGGGCTGAG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCCCCCGGCCCAGGTATaGGGCCTTGGCATGGACGCC +
Preference number: 2 (lower is better)
Translates to: EAVQRARPTEAGESQAVLPPAQV*GLGMDA
Trigger: GGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCATGTCATCCTTCAGGTaGCCAGCAGGCACTCCCCAC +
Preference number: 2 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLMSSFR*PAGTPH
Trigger: GTGGGGAGTGCCTGCTGGGCACCTGAAGGATGACAT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCGTGTCAGGGTGGGGGTaGTCTCAGCAGAAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSVSGWG*SQQKAE
Trigger: TTCTGCTTTCTGCTGAGACCACCCCCACCCTGACAC...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR TCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCAGGACAGAGGGGGACTaGTGGTGTCAGGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: GVEAVQRARPTEAGESQARTEGD*WCQGGG
Trigger: ACCCCCACCCTGACACCATCAGTCCCCCTCTGTCCT...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGTGTCAGGGTGGGGGTaGTCTCAGCAGAAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLVSGWG*SQQKAE
Trigger: TTCTGCTTTCTGCTGAGACCACCCCCACCCTGACAC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTGATGGTGTCAGGGTaGGGGTGGTCTCAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLLMVSG*GWSQQK
Trigger: TTTCTGCTGAGACCACCCCCACCCTGACACCATCAG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR TCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCCTAGCCTAGGCTCCTaGGGCCCAGGCCCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: LMGVEAVQRARPTEAGESPSLGS*GPGPSP
Trigger: AGGGCTGGGGCCTGGGCCTCAGGAGCCTAGGCTAGG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCCAGGTATGGGGCCTTaGCATGGACGCCCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: EAVQRARPTEAGESQAVLPGMGP*HGRPSS
Trigger: GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGTATGGGGCCTTGGCATaGACGCCCTTCCTCCACCTC +
Preference number: 2 (lower is better)
Translates to: EAVQRARPTEAGESQAVLYGALA*TPFLHL
Trigger: GAGGTGGAGGAAGGGCGTCCATGCCAAGGCCCCATA...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR GCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGATGTCATCCTTCAGGTaGCCAGCAGGCACTCCCCAC +
Preference number: 2 (lower is better)
Translates to: EAVQRARPTEAGESQAVLMSSFR*PAGTPH
Trigger: GTGGGGAGTGCCTGCTGGGCACCTGAAGGATGACAT...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGTCAGGGTGGGGGTaGTCTCAGCAGAAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: GVEAVQRARPTEAGESQAVSGWG*SQQKAE
Trigger: TTCTGCTTTCTGCTGAGACCACCCCCACCCTGACAC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR TCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCAGGACAGAGGGGGACTaGTGGTGTCAGGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: LMGVEAVQRARPTEAGESRTEGD*WCQGGG
Trigger: ACCCCCACCCTGACACCATCAGTCCCCCTCTGTCCT...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCCAGGTATGGGGCCTTaGCATGGACGCCCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: LMGVEAVQRARPTEAGESPGMGP*HGRPSS
Trigger: GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGAAAGAGTAAGCCCTTaGGGAGGAAGGAGGGGAAAC +
Preference number: 2 (lower is better)
Translates to: EAVQRARPTEAGESQAVLERVSP*GGRRGN
Trigger: GTTTCCCCTCCTTCCTCCCCAAGGGCTTACTCTTTC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR CAA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCCCAGGTATGGGGCCTaGGCATGGACGCCCTTCCTC +
Preference number: 3 (lower is better)
Translates to: GVEAVQRARPTEAGESQAPRYGA*AWTPFL
Trigger: GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR CAA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCAGAAAGAGTAAGCCCTaGGGGAGGAAGGAGGGGAAA +
Preference number: 3 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSRKSKP*GRKEGK
Trigger: TTTCCCCTCCTTCCTCCCCAAGGGCTTACTCTTTCT...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
3UTR-3UTR CAA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCCCAGGTATGGGGCCTaGGCATGGACGCCCTTCCTC +
Preference number: 3 (lower is better)
Translates to: LMGVEAVQRARPTEAGESPRYGA*AWTPFL
Trigger: GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCCCTTCTTGCCCAGCTaGGCGGCCCGGTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSPFLPS*AARCSR
Trigger: GCGGGAGCACCGGGCCGCCCAGCTGGGCAAGAAGGG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCAGCTGGGCGGCCCGGTaGTCCCGCAGCTCACTTGCC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSSWAAR*SRSSLA
Trigger: GGCAAGTGAGCTGCGGGAGCACCGGGCCGCCCAGCT...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCGGGCCGTGGGGCAGGTaGGTAGGCAGTGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSGPWGR*VGSAWW
Trigger: CCACCAGGCACTGCCTACCCACCTGCCCCACGGCCC...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCAGGGGGCTCCCTCCCTaGGGCCAGCTTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSRGLPP*GQLGSG
Trigger: GCCAGAGCCAAGCTGGCCCCAGGGAGGGAGCCCCCT...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCCTTCTTGCCCAGCTaGGCGGCCCGGTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLPFLPS*AARCSR
Trigger: GCGGGAGCACCGGGCCGCCCAGCTGGGCAAGAAGGG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCCTTCTTGCCCAGCTaGGCGGCCCGGTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPFLPS*AARCSR
Trigger: GCGGGAGCACCGGGCCGCCCAGCTGGGCAAGAAGGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCCCCCGGCCCAGGTATaGGGCCTTGGCATGGACGCC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSPPAQV*GLGMDA
Trigger: GGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
73% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGAGGCTGGGCCCAGCTaGGCTGTGAAGGCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLEAGPS*AVKAAR
Trigger: CCGCGCTGCCTTCACAGCTCAGCTGGGCCCAGCCTC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000020673.6
CDS-3UTR TCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCCTGGCCGAGGCTCTaGGCTGTGACGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPWPRL*AVTLSP
Trigger: CGGGCTCAGCGTCACAGCTCAGAGCCTCGGCCAGGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCTAGCCTAGGCTCCTaGGGCCCAGGCCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPSLGS*GPGPSP
Trigger: AGGGCTGGGGCCTGGGCCTCAGGAGCCTAGGCTAGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCATGGCACCCTGGGCCATaGTGGGGCCGGGGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAWHPGP*WGRGSG
Trigger: GCCTGACCCCCGGCCCCAGCATGGCCCAGGGTGCCA...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCTCTTGGCCAGGCGCTaGGCAGCCTCCAGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSLLARR*AASRSA
Trigger: AGCGGACCTGGAGGCTGCGCAGCGCCTGGCCAAGAG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCAGCTGGGCGGCCCGGTaGTCCCGCAGCTCACTTGCC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLSWAAR*SRSSLA
Trigger: GGCAAGTGAGCTGCGGGAGCACCGGGCCGCCCAGCT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACAGCTGGGCGGCCCGGTaGTCCCGCAGCTCACTTGCC +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHSWAAR*SRSSLA
Trigger: GGCAAGTGAGCTGCGGGAGCACCGGGCCGCCCAGCT...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCCCGGCCTGGGCCAGTaGTGCCTCCACTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSPGLGQ*CLHCIQ
Trigger: CTGGATGCAGTGGAGGCAGCACTGGCCCAGGCCGGG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCAAAGCCAGGCCGTGCTaGCCCCGGCCCAGGTATGGG +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSKARPC*PRPRYG
Trigger: CCCATACCTGGGCCGGGGGCAGCACGGCCTGGCTTT...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCGGGAAAGCCAGGCCGTaGTGCCCCCGGCCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSGKARP*CPRPRY
Trigger: ATACCTGGGCCGGGGGCAGCACGGCCTGGCTTTCCC...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACGAGTGGGCCGGGCCGTaGGGCAGGTGGGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHEWAGP*GRWVGS
Trigger: ACTGCCTACCCACCTGCCCCACGGCCCGGCCCACTC...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGAGTGGGCCGGGCCGTaGGGCAGGTGGGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLEWAGP*GRWVGS
Trigger: ACTGCCTACCCACCTGCCCCACGGCCCGGCCCACTC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCAGGCATCCGGCTCCCTaGCCGGGCCCCTTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLRHPAP*PGPFRG
Trigger: GCCTCTGAAGGGGCCCGGCCAGGGAGCCGGATGCCT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACAGGGGGCTCCCTCCCTaGGGCCAGCTTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHRGLPP*GQLGSG
Trigger: GCCAGAGCCAAGCTGGCCCCAGGGAGGGAGCCCCCT...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCGCACCTGCTCCTCCTaGGAGAGGCGGGTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHRTCSS*ERRVAA
Trigger: CGCTGCCACCCGCCTCTCCCAGGAGGAGCAGGTGCG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCCCCGGCCCAGGTATaGGGCCTTGGCATGGACGCC +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPPAQV*GLGMDA
Trigger: GGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCCAGAGCCCTGCCTTaGGCCCACCCCAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPRALP*AHPRWR
Trigger: TCTCCACCTGGGGTGGGCTCAAGGCAGGGCTCTGGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCTGGCCGAGGCTCTaGGCTGTGACGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAPWPRL*AVTLSP
Trigger: CGGGCTCAGCGTCACAGCTCAGAGCCTCGGCCAGGG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGCTGCCAAGGGGTGCTaGCCCCAGCCCAAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLAAKGC*PQPKAV
Trigger: GACAGCCTTGGGCTGGGGGCAGCACCCCTTGGCAGC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTTCGCTGCCAAGGGGTaGTGCCCCCAGCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSFAAKG*CPQPKA
Trigger: AGCCTTGGGCTGGGGGCAGCACCCCTTGGCAGCGAA...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTCTTGGCCAGGCGCTaGGCAGCCTCCAGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLLLARR*AASRSA
Trigger: AGCGGACCTGGAGGCTGCGCAGCGCCTGGCCAAGAG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCTCTTGGCCAGGCGCTaGGCAGCCTCCAGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHLLARR*AASRSA
Trigger: AGCGGACCTGGAGGCTGCGCAGCGCCTGGCCAAGAG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCTCGTGGGTCCGCACCTaGTCCTCCTGGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLSWVRT*SSWERR
Trigger: CCGCCTCTCCCAGGAGGAGCAGGTGCGGACCCACGA...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCCGGCCTGGGCCAGTaGTGCCTCCACTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPGLGQ*CLHCIQ
Trigger: CTGGATGCAGTGGAGGCAGCACTGGCCCAGGCCGGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGGGAAAGCCAGGCCGTaGTGCCCCCGGCCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLGKARP*CPRPRY
Trigger: ATACCTGGGCCGGGGGCAGCACGGCCTGGCTTTCCC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGGGGAGCCAGCGGCGTaGGCATCGTGGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLGEPAA*ASWWGD
Trigger: ATCTCCCCACCACGATGCCCACGCCGCTGGCTCCCC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACGCCATACATGCTGGCTaGGGGGCTCTGGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHAIHAG*GALGHR
Trigger: CCGGTGCCCCAGAGCCCCCCAGCCAGCATGTATGGC...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTGCTCCAACCTGGGGTaGGGCTGGCGGCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSCSNLG*GWRPMY
Trigger: GTACATGGGCCGCCAGCCCCACCCCAGGTTGGAGCA...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCATCTGCTCCAACCTaGGGTGGGGCTGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLPSAPT*GGAGGP
Trigger: TGGGCCGCCAGCCCCACCCCAGGTTGGAGCAGATGG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCATCTGCTCCAACCTaGGGTGGGGCTGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPSAPT*GGAGGP
Trigger: TGGGCCGCCAGCCCCACCCCAGGTTGGAGCAGATGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGAGTGGGCCGGGCCGTaGGGCAGGTGGGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAEWAGP*GRWVGS
Trigger: ACTGCCTACCCACCTGCCCCACGGCCCGGCCCACTC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCGCACAGGTCAGCGTGTaGGCGCCGTCCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSAQVSV*APSSED
Trigger: GTCCTCAGAGGACGGCGCCCACACGCTGACCTGTGC...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTCCAGGCTCGGGGCCTaGAAGAGGAAGACCCGCCAG +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSSRLGA*KRKTRQ
Trigger: CTGGCGGGTCTTCCTCTTCCAGGCCCCGAGCCTGGA...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACGCACCTGCTCCTCCTaGGAGAGGCGGGTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQARTCSS*ERRVAA
Trigger: CGCTGCCACCCGCCTCTCCCAGGAGGAGCAGGTGCG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTCTGTGCTCCCGGCCTaGGCCAGTGCTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSSVLPA*ASAAST
Trigger: AGTGGAGGCAGCACTGGCCCAGGCCGGGAGCACAGA...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGGCGGGGAGTGGGTCTaGTGTGGATGCTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLGGEWV*CGCFQP
Trigger: CGGCTGGAAGCATCCACATCAGACCCACTCCCCGCC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCGCGATTCTCTGGGCATaGGAGGAGACTTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSAILWA*EETSRG
Trigger: CCCCCGGGAAGTCTCCTCTCATGCCCAGAGAATCGC...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCCAAGGCTGTCCTCTaGGTGGCAGGGACTAGGGGG +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPKAVL*VAGTRG
Trigger: CCCCCTAGTCCCTGCCACTCAGAGGACAGCCTTGGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCAGGACAGAGGGGGACTaGTGGTGTCAGGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSRTEGD*WCQGGG
Trigger: ACCCCCACCCTGACACCATCAGTCCCCCTCTGTCCT...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAGCCCCGGGTGGGGGCTaGCCAGTGGGTGAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPAPGGG*PVGEEG
Trigger: ACCCTCTTCACCCACTGGGCAGCCCCCACCCGGGGC...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCGTACAAGGTTCCGGCTaGCAGGTAGGGCCGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSVQGSG*QVGPSL
Trigger: GAGGCTCGGCCCTACCTGGCAGCCGGAACCTTGTAC...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTCGGAGTACTTGGCTaGTCGCCCCACAGCCACCCC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLLGVLG*SPHSHP
Trigger: GGGGTGGCTGTGGGGCGAGCAGCCAAGTACTCCGAG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCTCGGAGTACTTGGCTaGTCGCCCCACAGCCACCCC +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHLGVLG*SPHSHP
Trigger: GGGGTGGCTGTGGGGCGAGCAGCCAAGTACTCCGAG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAGCTGGGGTGGGCCGCTaGTCGCCCAGAGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPAGVGR*SPRAET
Trigger: GGTCTCAGCTCTGGGCGAGCAGCGGCCCACCCCAGC...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAAAGCGCATGGCACCCTaGGCCATGCTGGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPKRMAP*AMLGPG
Trigger: CCCCGGCCCCAGCATGGCCCAGGGTGCCATGCGCTT...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCGAGCAGAAGCGCATaGCACCCTGGGCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLPSRSA*HPGPCW
Trigger: CCAGCATGGCCCAGGGTGCCATGCGCTTCTGCTCGG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGTGGGGGCTGCCCAGTaGGTGAAGAGGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAVGAAQ*VKRVPR
Trigger: CCTGGGCACCCTCTTCACCCACTGGGCAGCCCCCAC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAATGACCACAGAGCTCTaGGCCCCGGGTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAMTTEL*APGGGC
Trigger: GCAGCCCCCACCCGGGGCCCAGAGCTCTGTGGTCAT...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCGTGGGCCCTCAGAGCTaGGCTGACTTTCGATGGCCG +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSVGPQS*ADFRWP
Trigger: CGGCCATCGAAAGTCAGCCCAGCTCTGAGGGCCCAC...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAGGGCCGTGGGGCAGGTaGGTAGGCAGTGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPGPWGR*VGSAWW
Trigger: CCACCAGGCACTGCCTACCCACCTGCCCCACGGCCC...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCAGGCTGTCCTCTGAGTaGCAGGGACTAGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSRLSSE*QGLGGS
Trigger: GGAGCCCCCTAGTCCCTGCCACTCAGAGGACAGCCT...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGGTCCAGGAAAGGGCTaGAGCCACTGCCACTGCCCC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLGPGKG*SHCHCP
Trigger: GGGGCAGTGGCAGTGGCTCCAGCCCTTTCCTGGACC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCAGGCTCGGGGCCTaGAAGAGGAAGACCCGCCAG +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHSRLGA*KRKTRQ
Trigger: CTGGCGGGTCTTCCTCTTCCAGGCCCCGAGCCTGGA...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTTCAGCTTGGCCTCGTaGGTCCGCACCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSFSLAS*VRTCSS
Trigger: GGAGGAGCAGGTGCGGACCCACGAGGCCAAGCTGAA...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCCATGGCCTTCAGCTTaGCCTCGTGGGTCCGCACCT +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSPWPSA*PRGSAP
Trigger: AGGTGCGGACCCACGAGGCCAAGCTGAAGGCCATGG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCTCTGTGCTCCCGGCCTaGGCCAGTGCTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLSVLPA*ASAAST
Trigger: AGTGGAGGCAGCACTGGCCCAGGCCGGGAGCACAGA...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTGCTCGCCCAGAGCTaGGACCGAGGAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLLLAQS*DRGETE
Trigger: CTCTGTCTCTCCTCGGTCTCAGCTCTGGGCGAGCAG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCCACAAAGCGGAAGATaGCCACAGAGCTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSPQSGR*PQSSGP
Trigger: GGGCCCAGAGCTCTGTGGTCATCTTCCGCTTTGTGG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR TCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGGCGGGGAGTGGGTCTaGTGTGGATGCTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAGGEWV*CGCFQP
Trigger: CGGCTGGAAGCATCCACATCAGACCCACTCCCCGCC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACCCAGAGCCCTGCCTTaGGCCCACCCCAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPPRALP*AHPRWR
Trigger: TCTCCACCTGGGGTGGGCTCAAGGCAGGGCTCTGGG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCCTCAGAGCTGGGCTaGCTTTCGATGGCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPSELG*LSMAES
Trigger: CGACTCGGCCATCGAAAGTCAGCCCAGCTCTGAGGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCCTCAGAGCTGGGCTaGCTTTCGATGGCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLPSELG*LSMAES
Trigger: CGACTCGGCCATCGAAAGTCAGCCCAGCTCTGAGGG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCTCCAGGTTCCCGATaGAGTCCCCGCAGGTCATGC +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPPGSR*SPRRSC
Trigger: GCATGACCTGCGGGGACTTCATCGGGAACCTGGAGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCAGTCGCCGCCATCATTaGGGCCCTCCAGGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLSRRHH*GPPGSR
Trigger: TCGGGAACCTGGAGGGCCTCAATGATGGCGGCGACT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCCCTGGCCGAGGCTCTaGGCTGTGACGCTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAPWPRL*AVTLSP
Trigger: CGGGCTCAGCGTCACAGCTCAGAGCCTCGGCCAGGG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACAGGACAGAGGGGGACTaGTGGTGTCAGGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHRTEGD*WCQGGG
Trigger: ACCCCCACCCTGACACCATCAGTCCCCCTCTGTCCT...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAAAGGGCAAGGCCCACTaGAGCGGGGGAAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAKGKAH*SGGKPG
Trigger: GCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTT...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGTGGCACCCTGGGCCATaGTGGGGCCGGGGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLWHPGP*WGRGSG
Trigger: GCCTGACCCCCGGCCCCAGCATGGCCCAGGGTGCCA...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR GCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGCCCCGGGTGGGGGCTaGCCAGTGGGTGAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAAPGGG*PVGEEG
Trigger: ACCCTCTTCACCCACTGGGCAGCCCCCACCCGGGGC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR GCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACGTACAAGGTTCCGGCTaGCAGGTAGGGCCGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHVQGSG*QVGPSL
Trigger: GAGGCTCGGCCCTACCTGGCAGCCGGAACCTTGTAC...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCATCCTCATTGCCACTaGCGAGGCTGGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSHPHCH*RGWDEG
Trigger: GCCCTCATCCCAGCCTCGGCAGTGGCAATGAGGATG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCTTGGCTCTGGCCTCTaGCTCCTCCTCCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHLGSGL*LLLLPS
Trigger: AGAGGGGAGGAGGAGGAGGCAGAGGCCAGAGCCAAG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACGGGCCAGCCGCTCTGTaGTGTCCAGCTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHGPAAL*CPALSL
Trigger: CAGACTCAGAGCTGGACAGCACAGAGCGGCTGGCCC...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCCTGCAGTCAGGGTCTaGGTGCACCTTTCGCACCAG +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSPAVRV*VHLSHQ
Trigger: CTGGTGCGAAAGGTGCACGCAGACCCTGACTGCAGG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCTCTTCCAGCCCCGCTTaGCCCGAGGTGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLSSSPA*PEVSSC
Trigger: GCAGGAAGACACCTCGGGGCAAGCGGGGCTGGAAGA...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCAGTGCTGCCTCCACTaGATCCAGCTCCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSQCCLH*IQLLTA
Trigger: GGCAGTGAGGAGCTGGATGCAGTGGAGGCAGCACTG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCGAGCAGAAGCGCATaGCACCCTGGGCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAPSRSA*HPGPCW
Trigger: CCAGCATGGCCCAGGGTGCCATGCGCTTCTGCTCGG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAGCCATACATGCTGGCTaGGGGGCTCTGGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPAIHAG*GALGHR
Trigger: CCGGTGCCCCAGAGCCCCCCAGCCAGCATGTATGGC...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACGCCGTAACTTCCGGTTaGAGCCAGGCCCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHAVTSG*SQAQGL
Trigger: CAGCCCTTGGGCCTGGCTCCAACCGGAAGTTACGGC...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGCCGTAACTTCCGGTTaGAGCCAGGCCCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLAVTSG*SQAQGL
Trigger: CAGCCCTTGGGCCTGGCTCCAACCGGAAGTTACGGC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAGGGCCGAGCCTCCTCTaGCGGGGAGTGGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPGPSLL*RGVGLM
Trigger: CATCAGACCCACTCCCCGCCAGAGGAGGCTCGGCCC...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCAACCTGGGGTGGGGCTaGCGGCCCATGTACAAGGTT +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSNLGWG*RPMYKV
Trigger: AACCTTGTACATGGGCCGCCAGCCCCACCCCAGGTT...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCATGCTCCAACCTGGGGTaGGGCTGGCGGCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQACSNLG*GWRPMY
Trigger: GTACATGGGCCGCCAGCCCCACCCCAGGTTGGAGCA...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACCATCTGCTCCAACCTaGGGTGGGGCTGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPPSAPT*GGAGGP
Trigger: TGGGCCGCCAGCCCCACCCCAGGTTGGAGCAGATGG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCTGTCTCGGAGTACTTaGCTGCTCGCCCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSLSRST*LLAPQP
Trigger: TGGCTGTGGGGCGAGCAGCCAAGTACTCCGAGACAG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTGGGCTGACTTTCGATaGCCGAGTCGGCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHWADFR*PSRPPP
Trigger: GGGAGGAGGCCGACTCGGCCATCGAAAGTCAGCCCA...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGTGGGCCCTCAGAGCTaGGCTGACTTTCGATGGCCG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLVGPQS*ADFRWP
Trigger: CGGCCATCGAAAGTCAGCCCAGCTCTGAGGGCCCAC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACGGGGTGCAGGGGGTTaGGGAGGCAGCTCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQARGAGG*GGSSKV
Trigger: CACCTTTGAGCTGCCTCCCCAACCCCCTGCACCCCG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCTTCAAGAGGGGCAAGTaGGGCGGGAGCTGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLFKRGK*GGSWWV
Trigger: GACCCACCAGCTCCCGCCCCACTTGCCCCTCTTGAA...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCAGGCTGTCCTCTGAGTaGCAGGGACTAGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLRLSSE*QGLGGS
Trigger: GGAGCCCCCTAGTCCCTGCCACTCAGAGGACAGCCT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACAGCTGGCTCAGGGGTaGTTCGCTGCCAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAQLAQG*FAAKGC
Trigger: GCACCCCTTGGCAGCGAACCACCCCTGAGCCAGCTG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGGTCCAGGAAAGGGCTaGAGCCACTGCCACTGCCCC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAGPGKG*SHCHCP
Trigger: GGGGCAGTGGCAGTGGCTCCAGCCCTTTCCTGGACC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCCTTGAGGATCCCGTaGAAGCTCTTCCAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPLRIP*KLFQPR
Trigger: GCGGGGCTGGAAGAGCTTCCACGGGATCCTCAAGGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCCTTGAGGATCCCGTaGAAGCTCTTCCAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLPLRIP*KLFQPR
Trigger: GCGGGGCTGGAAGAGCTTCCACGGGATCCTCAAGGG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCTTCAGCTTGGCCTCGTaGGTCCGCACCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLFSLAS*VRTCSS
Trigger: GGAGGAGCAGGTGCGGACCCACGAGGCCAAGCTGAA...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCATGGCCTTCAGCTTaGCCTCGTGGGTCCGCACCT +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPWPSA*PRGSAP
Trigger: AGGTGCGGACCCACGAGGCCAAGCTGAAGGCCATGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCATCTGTGCTCCCGGCCTaGGCCAGTGCTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQASVLPA*ASAAST
Trigger: AGTGGAGGCAGCACTGGCCCAGGCCGGGAGCACAGA...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTATGGGGCCTTGGCATaGACGCCCTTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSYGALA*TPFLHL
Trigger: GAGGTGGAGGAAGGGCGTCCATGCCAAGGCCCCATA...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCAGGTATGGGGCCTTaGCATGGACGCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLPGMGP*HGRPSS
Trigger: GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCAGGTATGGGGCCTTaGCATGGACGCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPGMGP*HGRPSS
Trigger: GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGCCCAAGGGCTGGGGTaGGCCGCTGCTCGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLAQGLG*AAARPE
Trigger: CTCTGGGCGAGCAGCGGCCCACCCCAGCCCTTGGGC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611678.4
CDS-3UTR TCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTGCTCGCCCAGAGCTaGGACCGAGGAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQALLAQS*DRGETE
Trigger: CTCTGTCTCTCCTCGGTCTCAGCTCTGGGCGAGCAG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCCCAGAGCCCTGCCTTaGGCCCACCCCAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAPRALP*AHPRWR
Trigger: TCTCCACCTGGGGTGGGCTCAAGGCAGGGCTCTGGG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCTCAGAGCTGGGCTaGCTTTCGATGGCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAPSELG*LSMAES
Trigger: CGACTCGGCCATCGAAAGTCAGCCCAGCTCTGAGGG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACGCCTTTGGCCCGGTGTaGCTCCAGGATGGCTTCGAA +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHAFGPV*LQDGFE
Trigger: TTCGAAGCCATCCTGGAGTCACACCGGGCCAAAGGC...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACCCAAGGCTGTCCTCTaGGTGGCAGGGACTAGGGGG +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPPKAVL*VAGTRG
Trigger: CCCCCTAGTCCCTGCCACTCAGAGGACAGCCTTGGG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAAGTCGCCGCCATCATTaGGGCCCTCCAGGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQASRRHH*GPPGSR
Trigger: TCGGGAACCTGGAGGGCCTCAATGATGGCGGCGACT...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGACTCCGCGTGGTGCTaGAGGGGACAGCGCCAGATT +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQADSAWC*RGQRQI
Trigger: AATCTGGCGCTGTCCCCTTCAGCACCACGCGGAGTC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCAGTAAGGGGGCTGCATaGTCTTCAGACAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSSKGAA*SSDRPL
Trigger: CAGCGGCCTGTCTGAAGAGCATGCAGCCCCCTTACT...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGGAGTAAAGGCCATCTaGTCCAACCTGGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLGVKAI*SNLGWG
Trigger: GCCCCACCCCAGGTTGGAGCAGATGGCCTTTACTCC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCATCCTCATTGCCACTaGCGAGGCTGGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHHPHCH*RGWDEG
Trigger: GCCCTCATCCCAGCCTCGGCAGTGGCAATGAGGATG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTTGGCTCTGGCCTCTaGCTCCTCCTCCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQALGSGL*LLLLPS
Trigger: AGAGGGGAGGAGGAGGAGGCAGAGGCCAGAGCCAAG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGCTGCCAAGGGGTGCTaGCCCCAGCCCAAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAAAKGC*PQPKAV
Trigger: GACAGCCTTGGGCTGGGGGCAGCACCCCTTGGCAGC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCATTCGCTGCCAAGGGGTaGTGCCCCCAGCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPFAAKG*CPQPKA
Trigger: AGCCTTGGGCTGGGGGCAGCACCCCTTGGCAGCGAA...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGGGCCAGCCGCTCTGTaGTGTCCAGCTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAGPAAL*CPALSL
Trigger: CAGACTCAGAGCTGGACAGCACAGAGCGGCTGGCCC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCTGGACAAGGTGTCTGTaGTTCCCAGGGCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLWTRCL*FPGPAA
Trigger: AGCGGCTGGCCCTGGGAAGCACAGACACCTTGTCCA...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCTTGTTCTTGCCCAGGTaGCGGGCCACATCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLLFLPR*RATSAF
Trigger: GAAGGCCGATGTGGCCCGGCACCTGGGCAAGAACAA...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACAGTCAGGGTCTGCGTaGACCTTTCGCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAQSGSA*TFRTRA
Trigger: GGCCCTGGTGCGAAAGGTGCACGCAGACCCTGACTG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCTGCAGTCAGGGTCTaGGTGCACCTTTCGCACCAG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLPAVRV*VHLSHQ
Trigger: CTGGTGCGAAAGGTGCACGCAGACCCTGACTGCAGG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCCGAGGTGTCTTCCTaGAGTCAGGGTCTGCGTGCA +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPEVSS*SQGLRA
Trigger: TGCACGCAGACCCTGACTGCAGGAAGACACCTCGGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCAGACGTGGGGCCTCTTaGTGTAGTCACTGGCACGAG +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSRRGAS*CSHWHE
Trigger: CTCGTGCCAGTGACTACAGCAAGAGGCCCCACGTCT...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCTCGTGGGTCCGCACCTaGTCCTCCTGGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQASWVRT*SSWERR
Trigger: CCGCCTCTCCCAGGAGGAGCAGGTGCGGACCCACGA...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGACCCGAAGCAGCGCTaGATAGGTGCTGTAGCGGGA +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLDPKQR*IGAVAG
Trigger: TCCCGCTACAGCACCTATGCAGCGCTGCTTCGGGTC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGGGGGCTGCCCAGTaGGTGAAGAGGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAVGAAQ*VKRVPR
Trigger: CCTGGGCACCCTCTTCACCCACTGGGCAGCCCCCAC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCATGACCACAGAGCTCTaGGCCCCGGGTGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAMTTEL*APGGGC
Trigger: GCAGCCCCCACCCGGGGCCCAGAGCTCTGTGGTCAT...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGCCGTAACTTCCGGTTaGAGCCAGGCCCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAAVTSG*SQAQGL
Trigger: CAGCCCTTGGGCCTGGCTCCAACCGGAAGTTACGGC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGTGGGCCCTCAGAGCTaGGCTGACTTTCGATGGCCG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAVGPQS*ADFRWP
Trigger: CGGCCATCGAAAGTCAGCCCAGCTCTGAGGGCCCAC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGGGCCGTGGGGCAGGTaGGTAGGCAGTGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLGPWGR*VGSAWW
Trigger: CCACCAGGCACTGCCTACCCACCTGCCCCACGGCCC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGAGGCATCCGGCTCCCTaGCCGGGCCCCTTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLRHPAP*PGPFRG
Trigger: GCCTCTGAAGGGGCCCGGCCAGGGAGCCGGATGCCT...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTATCGCTGGGAGAAGTaGGCCAGCACGCGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHYRWEK*ASTRSR
Trigger: ACGAGAGCGCGTGCTGGCCCACTTCTCCCAGCGATA...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCTATCGCTGGGAGAAGTaGGCCAGCACGCGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLYRWEK*ASTRSR
Trigger: ACGAGAGCGCGTGCTGGCCCACTTCTCCCAGCGATA...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCTTGAGGATCCCGTaGAAGCTCTTCCAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAPLRIP*KLFQPR
Trigger: GCGGGGCTGGAAGAGCTTCCACGGGATCCTCAAGGG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCATGGCCTTCAGCTTaGCCTCGTGGGTCCGCACCT +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAPWPSA*PRGSAP
Trigger: AGGTGCGGACCCACGAGGCCAAGCTGAAGGCCATGG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCTATGGGGCCTTGGCATaGACGCCCTTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLYGALA*TPFLHL
Trigger: GAGGTGGAGGAAGGGCGTCCATGCCAAGGCCCCATA...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCAGGTATGGGGCCTTaGCATGGACGCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAPGMGP*HGRPSS
Trigger: GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGGCGGGGAGTGGGTCTaGTGTGGATGCTTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAGGEWV*CGCFQP
Trigger: CGGCTGGAAGCATCCACATCAGACCCACTCCCCGCC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAGCGATTCTCTGGGCATaGGAGGAGACTTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPAILWA*EETSRG
Trigger: CCCCCGGGAAGTCTCCTCTCATGCCCAGAGAATCGC...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCCCAAGGCTGTCCTCTaGGTGGCAGGGACTAGGGGG +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAPKAVL*VAGTRG
Trigger: CCCCCTAGTCCCTGCCACTCAGAGGACAGCCTTGGG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCCACATCGGCCTTCCTaGAGCCATCTAGTCGGTACA +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSPHRPS*SHLVGT
Trigger: TGTACCGACTAGATGGCTTCAGGAAGGCCGATGTGG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCAGAGGATCATGCCCTTaGGGATCCCGTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSRGSCP*GSRGSS
Trigger: AGAGCTTCCACGGGATCCTCAAGGGCATGATCCTCT...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTTGAGCTCCGTCTCTaGAAGGGCCTTCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLLELRL*KGLPRL
Trigger: AAGCCTGGGAAGGCCCTTTCAGAGACGGAGCTCAAG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCAAGGGCAAGGCCCACTaGAGCGGGGGAAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAKGKAH*SGGKPG
Trigger: GCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTT...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACTTCAGACAGGCCGCTaGTCGCCCAGAGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPLQTGR*SPRAET
Trigger: GGTCTCAGCTCTGGGCGAGCAGCGGCCTGTCTGAAG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCAGTAAGGGGGCTGCATaGTCTTCAGACAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLSKGAA*SSDRPL
Trigger: CAGCGGCCTGTCTGAAGAGCATGCAGCCCCCTTACT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCAGAGGTGTACAGGGTaGTGTCACACGTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSQRCTG*CHTSQF
Trigger: GAACTGGGACGTGTGACAGCACCCTGTACACCTCTG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGGAGTAAAGGCCATCTaGTCCAACCTGGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAGVKAI*SNLGWG
Trigger: GCCCCACCCCAGGTTGGAGCAGATGGCCTTTACTCC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCGTCCTCATCCTCATTaGCACTGCCGAGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLRPHPH*HCRGWD
Trigger: ATCCCAGCCTCGGCAGTGGCAATGAGGATGAGGACG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGGCTGGTATAGGAGGTaGCTTTGGCCCGGTGTGACT +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLGWYRR*LWPGVT
Trigger: AGTCACACCGGGCCAAAGGCACCTCCTATACCAGCC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACTTGGCTCTGGCCTCTaGCTCCTCCTCCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPLGSGL*LLLLPS
Trigger: AGAGGGGAGGAGGAGGAGGCAGAGGCCAGAGCCAAG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGCTGCCAAGGGGTGCTaGCCCCAGCCCAAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLAAKGC*PQPKAV
Trigger: GACAGCCTTGGGCTGGGGGCAGCACCCCTTGGCAGC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCTTCGCTGCCAAGGGGTaGTGCCCCCAGCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAFAAKG*CPQPKA
Trigger: AGCCTTGGGCTGGGGGCAGCACCCCTTGGCAGCGAA...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCATTGTTCTTGCCCAGGTaGCGGGCCACATCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQALFLPR*RATSAF
Trigger: GAAGGCCGATGTGGCCCGGCACCTGGGCAAGAACAA...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCAGTCCCCGCAGGTCATaGGCTTCCCGATGTTATGGC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLSPRRS*ASRCYG
Trigger: GCCATAACATCGGGAAGCGCATGACCTGCGGGGACT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCTGCAGTCAGGGTCTaGGTGCACCTTTCGCACCAG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAPAVRV*VHLSHQ
Trigger: CTGGTGCGAAAGGTGCACGCAGACCCTGACTGCAGG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCAGACGTGGGGCCTCTTaGTGTAGTCACTGGCACGAG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLRRGAS*CSHWHE
Trigger: CTCGTGCCAGTGACTACAGCAAGAGGCCCCACGTCT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACGAGTGATCCAGGACTaGATCTGCTCCAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQARVIQD*ICSRLG
Trigger: CCCGAGCCTGGAGCAGATGCAGTCCTGGATCACTCG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGTCGTGGGTCCGCACCTaGTCCTCCTGGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLSWVRT*SSWERR
Trigger: CCGCCTCTCCCAGGAGGAGCAGGTGCGGACCCACGA...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCGCAGCTCACTTaGCATGGCCTTCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQALPQLT*HGLQLG
Trigger: GCCAAGCTGAAGGCCATGGCAAGTGAGCTGCGGGAG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGACCCGAAGCAGCGCTaGATAGGTGCTGTAGCGGGA +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQADPKQR*IGAVAG
Trigger: TCCCGCTACAGCACCTATGCAGCGCTGCTTCGGGTC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCAGCTCCTCACTGCCTaGCTTCAGCTTGACCCGAAG +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHQLLTA*LQLDPK
Trigger: CTTCGGGTCAAGCTGAAGGCAGGCAGTGAGGAGCTG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACAGTGCTGCCTCCACTaGATCCAGCTCCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAQCCLH*IQLLTA
Trigger: GGCAGTGAGGAGCTGGATGCAGTGGAGGCAGCACTG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCCCGGCCTGGGCCAGTaGTGCCTCCACTGCATCCAG +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLPGLGQ*CLHCIQ
Trigger: CTGGATGCAGTGGAGGCAGCACTGGCCCAGGCCGGG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGAAAGCCAGGCCGTGCTaGCCCCGGCCCAGGTATGGG +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLKARPC*PRPRYG
Trigger: CCCATACCTGGGCCGGGGGCAGCACGGCCTGGCTTT...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGGGGAGCCAGCGGCGTaGGCATCGTGGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLGEPAA*ASWWGD
Trigger: ATCTCCCCACCACGATGCCCACGCCGCTGGCTCCCC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGGGCCGAGCCTCCTCTaGCGGGGAGTGGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLGPSLL*RGVGLM
Trigger: CATCAGACCCACTCCCCGCCAGAGGAGGCTCGGCCC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCAGCTGGCTCAGGGGTaGTTCGCTGCCAAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAQLAQG*FAAKGC
Trigger: GCACCCCTTGGCAGCGAACCACCCCTGAGCCAGCTG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAGAGTCGGACACCAGCTaGCTCAGGGGTGGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPESDTS*LRGGSL
Trigger: CAGCGAACCACCCCTGAGCCAGCTGGTGTCCGACTC...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTCGGTACAGCCTCTTaGCCAGGCGCTGCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAVGTAS*PGAAQP
Trigger: AGGCTGCGCAGCGCCTGGCCAAGAGGCTGTACCGAC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACACGCGCTCTCGTTCCTaGGTCTCACCCATTAAGGCC +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHTRSRS*VSPIKA
Trigger: GGCCTTAATGGGTGAGACCCAGGAACGAGAGCGCGT...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCACGCGCTCTCGTTCCTaGGTCTCACCCATTAAGGCC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLTRSRS*VSPIKA
Trigger: GGCCTTAATGGGTGAGACCCAGGAACGAGAGCGCGT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCACTGGAAGTATCGCTaGGAGAAGTGGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLHWKYR*EKWAST
Trigger: CGTGCTGGCCCACTTCTCCCAGCGATACTTCCAGTG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCGTGGCCAGGGCATGGTaGATGCTGATGGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSVARAW*MLMAFL
Trigger: CAAGAATGCCATCAGCATCCACCATGCCCTGGCCAC...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCTCAGCCCCAAATCCTaGTCTCTGTCCAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHLSPKS*SLSKPG
Trigger: GCCTGGCTTGGACAGAGACCAGGATTTGGGGCTGAG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGAGACAGAGGAGAGGCTaGGCCCAGCTGAGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLRQRRG*AQLSAG
Trigger: CCCCGCGCTCAGCTGGGCCCAGCCTCTCCTCTGTCT...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611678.4
CDS-3UTR TCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAGCCTTTGGCCCGGTGTaGCTCCAGGATGGCTTCGAA +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPAFGPV*LQDGFE
Trigger: TTCGAAGCCATCCTGGAGTCACACCGGGCCAAAGGC...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCACATCGGCCTTCCTaGAGCCATCTAGTCGGTACA +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPHRPS*SHLVGT
Trigger: TGTACCGACTAGATGGCTTCAGGAAGGCCGATGTGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGGGCGCCGTCCTCTaGGGACAGGGCTTCAGGATT +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAVGAVL*GQGFRI
Trigger: AATCCTGAAGCCCTGTCCTCAGAGGACGGCGCCCAC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGAAGGGCAAGGCCCACTaGAGCGGGGGAAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLKGKAH*SGGKPG
Trigger: GCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTT...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCAGAGGTGTACAGGGTaGTGTCACACGTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLQRCTG*CHTSQF
Trigger: GAACTGGGACGTGTGACAGCACCCTGTACACCTCTG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGGCTGGTATAGGAGGTaGCTTTGGCCCGGTGTGACT +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAGWYRR*LWPGVT
Trigger: AGTCACACCGGGCCAAAGGCACCTCCTATACCAGCC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCATGGACAAGGTGTCTGTaGTTCCCAGGGCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPWTRCL*FPGPAA
Trigger: AGCGGCTGGCCCTGGGAAGCACAGACACCTTGTCCA...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTCCAGGTCCGCTTTCTaGCCATTGGACAAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSSRSAF*PLDKVS
Trigger: AGACACCTTGTCCAATGGGCAGAAAGCGGACCTGGA...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCACAGGGCTTCAGGATTaGACTGGAAGTATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSTGLQD*TGSIAG
Trigger: CCCAGCGATACTTCCAGTGCAATCCTGAAGCCCTGT...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAAGTCCCCGCAGGTCATaGGCTTCCCGATGTTATGGC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQASPRRS*ASRCYG
Trigger: GCCATAACATCGGGAAGCGCATGACCTGCGGGGACT...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCAGTCAGGGTCTGCGTaGACCTTTCGCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAQSGSA*TFRTRA
Trigger: GGCCCTGGTGCGAAAGGTGCACGCAGACCCTGACTG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACCCGAGGTGTCTTCCTaGAGTCAGGGTCTGCGTGCA +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPPEVSS*SQGLRA
Trigger: TGCACGCAGACCCTGACTGCAGGAAGACACCTCGGG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACGAGTGATCCAGGACTaGATCTGCTCCAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPRVIQD*ICSRLG
Trigger: CCCGAGCCTGGAGCAGATGCAGTCCTGGATCACTCG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACTCCCGCAGCTCACTTaGCATGGCCTTCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPLPQLT*HGLQLG
Trigger: GCCAAGCTGAAGGCCATGGCAAGTGAGCTGCGGGAG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGCCTCCTTCTGCCGCTaGTCTTCAGCCTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAASFCR*SSASLP
Trigger: GGGCAAGGAGGCTGAAGAGCAGCGGCAGAAGGAGGC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACAGCTCCTCACTGCCTaGCTTCAGCTTGACCCGAAG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAQLLTA*LQLDPK
Trigger: CTTCGGGTCAAGCTGAAGGCAGGCAGTGAGGAGCTG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACAGTGCTGCCTCCACTaGATCCAGCTCCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPQCCLH*IQLLTA
Trigger: GGCAGTGAGGAGCTGGATGCAGTGGAGGCAGCACTG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAATGTCATCCTTCAGGTaGCCAGCAGGCACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAMSSFR*PAGTPH
Trigger: GTGGGGAGTGCCTGCTGGGCACCTGAAGGATGACAT...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAATCGTGGTGGGGAGATaGCACAGTCGCCTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPIVVGR*HSRLPS
Trigger: GCTCGGAAGGCGACTGTGCCATCTCCCCACCACGAT...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCTGGGCTGACTTTCGATaGCCGAGTCGGCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAWADFR*PSRPPP
Trigger: GGGAGGAGGCCGACTCGGCCATCGAAAGTCAGCCCA...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTATAGGAGGTGCCTTTaGCCCGGTGTGACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHYRRCL*PGVTPG
Trigger: TCCTGGAGTCACACCGGGCCAAAGGCACCTCCTATA...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACCAGCGAGGCGAGGCTaGTATAGGAGGTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPPARRG*YRRCLW
Trigger: CCAAAGGCACCTCCTATACCAGCCTCGCCTCGCTGG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGAAGAAGGGGCTCTaGGTTGGGCCAGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAVKKGL*VGPGEA
Trigger: GGCCTCACCTGGCCCAACCCAGAGCCCCTTCTTCAC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGAGTCGGACACCAGCTaGCTCAGGGGTGGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAESDTS*LRGGSL
Trigger: CAGCGAACCACCCCTGAGCCAGCTGGTGTCCGACTC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGTCGGTACAGCCTCTTaGCCAGGCGCTGCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLVGTAS*PGAAQP
Trigger: AGGCTGCGCAGCGCCTGGCCAAGAGGCTGTACCGAC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACACTGGAAGTATCGCTaGGAGAAGTGGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAHWKYR*EKWAST
Trigger: CGTGCTGGCCCACTTCTCCCAGCGATACTTCCAGTG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGCACAGGTCAGCGTGTaGGCGCCGTCCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLAQVSV*APSSED
Trigger: GTCCTCAGAGGACGGCGCCCACACGCTGACCTGTGC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACGCTCCTCCTCGTCTATaGCCCACTGCAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHAPPRL*PTAASH
Trigger: ATGAGAAGCTGCAGTGGGCCATAGACGAGGAGGAGC...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGTGGCCAGGGCATGGTaGATGCTGATGGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLVARAW*MLMAFL
Trigger: CAAGAATGCCATCAGCATCCACCATGCCCTGGCCAC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAAGTCACTGGCACGAGTaGCCAGGGCATGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPSHWHE*PGHGGC
Trigger: GCATCCACCATGCCCTGGCCACTCGTGCCAGTGACT...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCGGCTGAACTTCTTTTaGGAGCTAACAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSRLNFF*ELTAAG
Trigger: CCCAGCTGCTGTTAGCTCCCAAAAGAAGTTCAGCCG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACGTGTCAGGGTGGGGGTaGTCTCAGCAGAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHVSGWG*SQQKAE
Trigger: TTCTGCTTTCTGCTGAGACCACCCCCACCCTGACAC...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCGAAAGAGTAAGCCCTTaGGGAGGAAGGAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSERVSP*GGRRGN
Trigger: GTTTCCCCTCCTTCCTCCCCAAGGGCTTACTCTTTC...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGGCCCAGCTGAGCTGTaGAGGCAGCGCGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESGPAEL*RQRGSR
Trigger: ACGGGAGCCGCGCTGCCTTCACAGCTCAGCTGGGCC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000020673.6
CDS-3UTR TCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCTTCGAACACACAACTaGAAGAGTCAGGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSLRTHN*KSQAHQ
Trigger: CTGATGGGCCTGACTCTTTCAGTTGTGTGTTCGAAG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGTGGGCGCCGTCCTCTaGGGACAGGGCTTCAGGATT +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLVGAVL*GQGFRI
Trigger: AATCCTGAAGCCCTGTCCTCAGAGGACGGCGCCCAC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCCTCCAGGTTCCCGATaGAGTCCCCGCAGGTCATGC +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLPPGSR*SPRRSC
Trigger: GCATGACCTGCGGGGACTTCATCGGGAACCTGGAGG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACTTGAGCTCCGTCTCTaGAAGGGCCTTCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPLELRL*KGLPRL
Trigger: AAGCCTGGGAAGGCCCTTTCAGAGACGGAGCTCAAG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGGGCCAGCCGCTCTGTaGTGTCCAGCTCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLGPAAL*CPALSL
Trigger: CAGACTCAGAGCTGGACAGCACAGAGCGGCTGGCCC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCTCCAGGTCCGCTTTCTaGCCATTGGACAAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLSRSAF*PLDKVS
Trigger: AGACACCTTGTCCAATGGGCAGAAAGCGGACCTGGA...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGCCTCCTTCTGCCGCTaGTCTTCAGCCTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLASFCR*SSASLP
Trigger: GGGCAAGGAGGCTGAAGAGCAGCGGCAGAAGGAGGC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAATGTCATCCTTCAGGTaGCCAGCAGGCACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPMSSFR*PAGTPH
Trigger: GTGGGGAGTGCCTGCTGGGCACCTGAAGGATGACAT...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCATCAGTGGCCTCACACTaGCCTTCTCCACAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQASVASH*PSPQSG
Trigger: TCCGCTTTGTGGAGAAGGCCAGTGTGAGGCCACTGA...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCTGTCTCGGAGTACTTaGCTGCTCGCCCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQALSRST*LLAPQP
Trigger: TGGCTGTGGGGCGAGCAGCCAAGTACTCCGAGACAG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCATATAGGAGGTGCCTTTaGCCCGGTGTGACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAYRRCL*PGVTPG
Trigger: TCCTGGAGTCACACCGGGCCAAAGGCACCTCCTATA...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCCAGCGAGGCGAGGCTaGTATAGGAGGTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAPARRG*YRRCLW
Trigger: CCAAAGGCACCTCCTATACCAGCCTCGCCTCGCTGG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCATCAGCAGCAGAGCTaGTACCAGAATCCGGTTCAA +
Preference number: 4 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSHQQQS*YQNPVQ
Trigger: TTGAACCGGATTCTGGTACCAGCTCTGCTGCTGATG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCAGGGGGCTCCCTCCCTaGGGCCAGCTTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESRGLPP*GQLGSG
Trigger: GCCAGAGCCAAGCTGGCCCCAGGGAGGGAGCCCCCT...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACACTGGAAGTATCGCTaGGAGAAGTGGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPHWKYR*EKWAST
Trigger: CGTGCTGGCCCACTTCTCCCAGCGATACTTCCAGTG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCGATGTTATGGCCGTaGAGATCCGTGTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAPMLWP*RSVLSS
Trigger: GCTGCTCAACACGGATCTCCACGGCCATAACATCGG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGTGGCCAGGGCATGGTaGATGCTGATGGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAVARAW*MLMAFL
Trigger: CAAGAATGCCATCAGCATCCACCATGCCCTGGCCAC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCATCTTGCTGTAGTCACTaGCACGAGTGGCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQASCCSH*HEWPGH
Trigger: ATGCCCTGGCCACTCGTGCCAGTGACTACAGCAAGA...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCGGCTGAACTTCTTTTaGGAGCTAACAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLRLNFF*ELTAAG
Trigger: CCCAGCTGCTGTTAGCTCCCAAAAGAAGTTCAGCCG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCGGCTGAACTTCTTTTaGGAGCTAACAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHRLNFF*ELTAAG
Trigger: CCCAGCTGCTGTTAGCTCCCAAAAGAAGTTCAGCCG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCGCACCTGCTCCTCCTaGGAGAGGCGGGTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESRTCSS*ERRVAA
Trigger: CGCTGCCACCCGCCTCTCCCAGGAGGAGCAGGTGCG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGTTCAGCTTGGCCTCGTaGGTCCGCACCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLFSLAS*VRTCSS
Trigger: GGAGGAGCAGGTGCGGACCCACGAGGCCAAGCTGAA...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGTGTCAGGGTGGGGGTaGTCTCAGCAGAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAVSGWG*SQQKAE
Trigger: TTCTGCTTTCTGCTGAGACCACCCCCACCCTGACAC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACTCAGCCCCAAATCCTaGTCTCTGTCCAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPLSPKS*SLSKPG
Trigger: GCCTGGCTTGGACAGAGACCAGGATTTGGGGCTGAG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCCCCCGGCCCAGGTATaGGGCCTTGGCATGGACGCC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESPPAQV*GLGMDA
Trigger: GGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCCACAAAGCGGAAGATaGCCACAGAGCTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLPQSGR*PQSSGP
Trigger: GGGCCCAGAGCTCTGTGGTCATCTTCCGCTTTGTGG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR TCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTTCGAACACACAACTaGAAGAGTCAGGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLLRTHN*KSQAHQ
Trigger: CTGATGGGCCTGACTCTTTCAGTTGTGTGTTCGAAG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCAGCCACCAGTTTGCTaGAGTCATTGTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLQPPVC*SHCSCP
Trigger: TGGGCAAGAACAATGACTTCAGCAAACTGGTGGCTG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCAGCCACCAGTTTGCTaGAGTCATTGTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHQPPVC*SHCSCP
Trigger: TGGGCAAGAACAATGACTTCAGCAAACTGGTGGCTG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCTTCAGAAACACCCTaGGAGCTTGGTCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAPSETP*ELGPES
Trigger: TGACTCTGGACCAAGCTCTCAGGGTGTTTCTGAAGG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAAGAGGATCATGCCCTTaGGGATCCCGTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPRGSCP*GSRGSS
Trigger: AGAGCTTCCACGGGATCCTCAAGGGCATGATCCTCT...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAGTAGCAAGGAGCCTGTaGTGCCATACATGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPVARSL*CHTCWL
Trigger: CAGCCAGCATGTATGGCAGCACAGGCTCCTTGCTAC...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR GCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGGAGTAAAGGCCATCTaGTCCAACCTGGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLGVKAI*SNLGWG
Trigger: GCCCCACCCCAGGTTGGAGCAGATGGCCTTTACTCC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAATCTTCTTCCCCACCTaGCTCATCGTCGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAIFFPT*LIVVLI
Trigger: GATGAGGACGACGATGAGGCAGGTGGGGAAGAAGAT...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCAGACGTGGGGCCTCTTaGTGTAGTCACTGGCACGAG +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQARRGAS*CSHWHE
Trigger: CTCGTGCCAGTGACTACAGCAAGAGGCCCCACGTCT...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCGAGTGATCCAGGACTaGATCTGCTCCAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLRVIQD*ICSRLG
Trigger: CCCGAGCCTGGAGCAGATGCAGTCCTGGATCACTCG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGCAGCGCTGCATAGGTaGTGTAGCGGGATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAAALHR*CSGISQ
Trigger: TTGAGAAATCCCGCTACAGCACCTATGCAGCGCTGC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCAGCTCCTCACTGCCTaGCTTCAGCTTGACCCGAAG +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAQLLTA*LQLDPK
Trigger: CTTCGGGTCAAGCTGAAGGCAGGCAGTGAGGAGCTG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGGGAAAGCCAGGCCGTaGTGCCCCCGGCCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESGKARP*CPRPRY
Trigger: ATACCTGGGCCGGGGGCAGCACGGCCTGGCTTTCCC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGATCGTGGTGGGGAGATaGCACAGTCGCCTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLIVVGR*HSRLPS
Trigger: GCTCGGAAGGCGACTGTGCCATCTCCCCACCACGAT...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGAACCTGGGGTGGGGCTaGCGGCCCATGTACAAGGTT +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLNLGWG*RPMYKV
Trigger: AACCTTGTACATGGGCCGCCAGCCCCACCCCAGGTT...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCGCTTTCTGCCCATTaGACAAGGTGTCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAPLSAH*TRCLCF
Trigger: GAAGCACAGACACCTTGTCCAATGGGCAGAAAGCGG...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCACGCGCTCTCGTTCCTaGGTCTCACCCATTAAGGCC +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQATRSRS*VSPIKA
Trigger: GGCCTTAATGGGTGAGACCCAGGAACGAGAGCGCGT...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACGCTTCCCGATGTTATaGCCGTGGAGATCCGTGTTG +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPRFPML*PWRSVL
Trigger: CAACACGGATCTCCACGGCCATAACATCGGGAAGCG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAGCTCCTCCTCGTCTATaGCCCACTGCAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPAPPRL*PTAASH
Trigger: ATGAGAAGCTGCAGTGGGCCATAGACGAGGAGGAGC...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGCAGCTCACTTGCCATaGCCTTCAGCTTGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAAAHLP*PSAWPR
Trigger: ACGAGGCCAAGCTGAAGGCCATGGCAAGTGAGCTGC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACTGATGGTGTCAGGGTaGGGGTGGTCTCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPLMVSG*GWSQQK
Trigger: TTTCTGCTGAGACCACCCCCACCCTGACACCATCAG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACCTTCAGAAACACCCTaGGAGCTTGGTCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPPSETP*ELGPES
Trigger: TGACTCTGGACCAAGCTCTCAGGGTGTTTCTGAAGG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCAGAGGATCATGCCCTTaGGGATCCCGTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQARGSCP*GSRGSS
Trigger: AGAGCTTCCACGGGATCCTCAAGGGCATGATCCTCT...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCTTGAGCTCCGTCTCTaGAAGGGCCTTCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLLELRL*KGLPRL
Trigger: AAGCCTGGGAAGGCCCTTTCAGAGACGGAGCTCAAG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTAGCAAGGAGCCTGTaGTGCCATACATGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAVARSL*CHTCWL
Trigger: CAGCCAGCATGTATGGCAGCACAGGCTCCTTGCTAC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR GCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCGTCCTCATCCTCATTaGCACTGCCGAGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLRPHPH*HCRGWD
Trigger: ATCCCAGCCTCGGCAGTGGCAATGAGGATGAGGACG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAGACCAGGTATCCCCCTaGTTCAGGAATCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPDQVSP*FRNPVS
Trigger: TGACACTGGATTCCTGAACCAGGGGGATACCTGGTC...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCGGGGTGCAGGGGGTTaGGGAGGCAGCTCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESRGAGG*GGSSKV
Trigger: CACCTTTGAGCTGCCTCCCCAACCCCCTGCACCCCG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGTCGGTACAGCCTCTTaGCCAGGCGCTGCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESVGTAS*PGAAQP
Trigger: AGGCTGCGCAGCGCCTGGCCAAGAGGCTGTACCGAC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGCACAGGTCAGCGTGTaGGCGCCGTCCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESAQVSV*APSSED
Trigger: GTCCTCAGAGGACGGCGCCCACACGCTGACCTGTGC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCGCTTCCCGATGTTATaGCCGTGGAGATCCGTGTTG +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQARFPML*PWRSVL
Trigger: CAACACGGATCTCCACGGCCATAACATCGGGAAGCG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGCTCCTCCTCGTCTATaGCCCACTGCAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAAPPRL*PTAASH
Trigger: ATGAGAAGCTGCAGTGGGCCATAGACGAGGAGGAGC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCTCCAGGCTCGGGGCCTaGAAGAGGAAGACCCGCCAG +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESSRLGA*KRKTRQ
Trigger: CTGGCGGGTCTTCCTCTTCCAGGCCCCGAGCCTGGA...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGCAGCTCACTTGCCATaGCCTTCAGCTTGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLAAHLP*PSAWPR
Trigger: ACGAGGCCAAGCTGAAGGCCATGGCAAGTGAGCTGC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCTGATGGTGTCAGGGTaGGGGTGGTCTCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQALMVSG*GWSQQK
Trigger: TTTCTGCTGAGACCACCCCCACCCTGACACCATCAG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAGAAAGAGTAAGCCCTTaGGGAGGAAGGAGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPERVSP*GGRRGN
Trigger: GTTTCCCCTCCTTCCTCCCCAAGGGCTTACTCTTTC...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCTGCTCGCCCAGAGCTaGGACCGAGGAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESLLAQS*DRGETE
Trigger: CTCTGTCTCTCCTCGGTCTCAGCTCTGGGCGAGCAG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGCGATTCTCTGGGCATaGGAGGAGACTTCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESAILWA*EETSRG
Trigger: CCCCCGGGAAGTCTCCTCTCATGCCCAGAGAATCGC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCCACATCGGCCTTCCTaGAGCCATCTAGTCGGTACA +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLPHRPS*SHLVGT
Trigger: TGTACCGACTAGATGGCTTCAGGAAGGCCGATGTGG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGTGGGCGCCGTCCTCTaGGGACAGGGCTTCAGGATT +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESVGAVL*GQGFRI
Trigger: AATCCTGAAGCCCTGTCCTCAGAGGACGGCGCCCAC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCCTCCAGGTTCCCGATaGAGTCCCCGCAGGTCATGC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESPPGSR*SPRRSC
Trigger: GCATGACCTGCGGGGACTTCATCGGGAACCTGGAGG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCTCCAGGTCCGCTTTCTaGCCATTGGACAAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQASRSAF*PLDKVS
Trigger: AGACACCTTGTCCAATGGGCAGAAAGCGGACCTGGA...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGTCAGGGTCTGCGTaGACCTTTCGCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESQSGSA*TFRTRA
Trigger: GGCCCTGGTGCGAAAGGTGCACGCAGACCCTGACTG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCTCTTCCAGCCCCGCTTaGCCCGAGGTGTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESSSSPA*PEVSSC
Trigger: GCAGGAAGACACCTCGGGGCAAGCGGGGCTGGAAGA...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGTCAGTGGCCTCACACTaGCCTTCTCCACAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLSVASH*PSPQSG
Trigger: TCCGCTTTGTGGAGAAGGCCAGTGTGAGGCCACTGA...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS-3UTR CCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGGAGTGGGTCTGATGTaGATGCTTCCAGCCGTAACT +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAGVGLM*MLPAVT
Trigger: AGTTACGGCTGGAAGCATCCACATCAGACCCACTCC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCTTCAAGAGGGGCAAGTaGGGCGGGAGCTGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESFKRGK*GGSWWV
Trigger: GACCCACCAGCTCCCGCCCCACTTGCCCCTCTTGAA...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACATCAGCAGCAGAGCTaGTACCAGAATCCGGTTCAA +
Preference number: 4 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPHQQQS*YQNPVQ
Trigger: TTGAACCGGATTCTGGTACCAGCTCTGCTGCTGATG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGAGTCGGACACCAGCTaGCTCAGGGGTGGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESESDTS*LRGGSL
Trigger: CAGCGAACCACCCCTGAGCCAGCTGGTGTCCGACTC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCCGATGTTATGGCCGTaGAGATCCGTGTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLPMLWP*RSVLSS
Trigger: GCTGCTCAACACGGATCTCCACGGCCATAACATCGG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCGCTTCCCGATGTTATaGCCGTGGAGATCCGTGTTG +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLRFPML*PWRSVL
Trigger: CAACACGGATCTCCACGGCCATAACATCGGGAAGCG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGTCTTGCTGTAGTCACTaGCACGAGTGGCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLSCCSH*HEWPGH
Trigger: ATGCCCTGGCCACTCGTGCCAGTGACTACAGCAAGA...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCTGATGGTGTCAGGGTaGGGGTGGTCTCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLLMVSG*GWSQQK
Trigger: TTTCTGCTGAGACCACCCCCACCCTGACACCATCAG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCAGCCACCAGTTTGCTaGAGTCATTGTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GVEAVQRARPTEAGESQAQPPVC*SHCSCP
Trigger: TGGGCAAGAACAATGACTTCAGCAAACTGGTGGCTG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCCTTCAGAAACACCCTaGGAGCTTGGTCCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLPSETP*ELGPES
Trigger: TGACTCTGGACCAAGCTCTCAGGGTGTTTCTGAAGG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGAGGCTGGGCCCAGCTaGGCTAACTTGACCCCTTTC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESEAGPS*ANLTPF
Trigger: GAAAGGGGTCAAGTTAGCTCAGCTGGGCCCAGCCTC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406432.5
CDS-3UTR GCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCATCCTCATTGCCACTaGCGAGGCTGGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESHPHCH*RGWDEG
Trigger: GCCCTCATCCCAGCCTCGGCAGTGGCAATGAGGATG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGATCTTCTTCCCCACCTaGCTCATCGTCGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLIFFPT*LIVVLI
Trigger: GATGAGGACGACGATGAGGCAGGTGGGGAAGAAGAT...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCTGGACAAGGTGTCTGTaGTTCCCAGGGCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESWTRCL*FPGPAA
Trigger: AGCGGCTGGCCCTGGGAAGCACAGACACCTTGTCCA...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCTCCCGCAGCTCACTTaGCATGGCCTTCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESLPQLT*HGLQLG
Trigger: GCCAAGCTGAAGGCCATGGCAAGTGAGCTGCGGGAG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGGAGTGGGTCTGATGTaGATGCTTCCAGCCGTAACT +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLGVGLM*MLPAVT
Trigger: AGTTACGGCTGGAAGCATCCACATCAGACCCACTCC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCAACCTGGGGTGGGGCTaGCGGCCCATGTACAAGGTT +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESNLGWG*RPMYKV
Trigger: AACCTTGTACATGGGCCGCCAGCCCCACCCCAGGTT...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGACCAGGTATCCCCCTaGTTCAGGAATCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLDQVSP*FRNPVS
Trigger: TGACACTGGATTCCTGAACCAGGGGGATACCTGGTC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCTGTCTCGGAGTACTTaGCTGCTCGCCCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESLSRST*LLAPQP
Trigger: TGGCTGTGGGGCGAGCAGCCAAGTACTCCGAGACAG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCCAGCGAGGCGAGGCTaGTATAGGAGGTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESPARRG*YRRCLW
Trigger: CCAAAGGCACCTCCTATACCAGCCTCGCCTCGCTGG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCCGCTTTCTGCCCATTaGACAAGGTGTCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: EAVQRARPTEAGESQAVLPLSAH*TRCLCF
Trigger: GAAGCACAGACACCTTGTCCAATGGGCAGAAAGCGG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCAGTCACTGGCACGAGTaGCCAGGGCATGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESSHWHE*PGHGGC
Trigger: GCATCCACCATGCCCTGGCCACTCGTGCCAGTGACT...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCTATGGGGCCTTGGCATaGACGCCCTTCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESYGALA*TPFLHL
Trigger: GAGGTGGAGGAAGGGCGTCCATGCCAAGGCCCCATA...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCGTCCTCATCCTCATTaGCACTGCCGAGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESRPHPH*HCRGWD
Trigger: ATCCCAGCCTCGGCAGTGGCAATGAGGATGAGGACG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGGCTGGTATAGGAGGTaGCTTTGGCCCGGTGTGACT +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESGWYRR*LWPGVT
Trigger: AGTCACACCGGGCCAAAGGCACCTCCTATACCAGCC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCAGTCCCCGCAGGTCATaGGCTTCCCGATGTTATGGC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESSPRRS*ASRCYG
Trigger: GCCATAACATCGGGAAGCGCATGACCTGCGGGGACT...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCATGTCATCCTTCAGGTaGCCAGCAGGCACTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESMSSFR*PAGTPH
Trigger: GTGGGGAGTGCCTGCTGGGCACCTGAAGGATGACAT...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGCAGCTCACTTGCCATaGCCTTCAGCTTGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESAAHLP*PSAWPR
Trigger: ACGAGGCCAAGCTGAAGGCCATGGCAAGTGAGCTGC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCTATAGGAGGTGCCTTTaGCCCGGTGTGACTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESYRRCL*PGVTPG
Trigger: TCCTGGAGTCACACCGGGCCAAAGGCACCTCCTATA...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCTCTTGCTGTAGTCACTaGCACGAGTGGCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESSCCSH*HEWPGH
Trigger: ATGCCCTGGCCACTCGTGCCAGTGACTACAGCAAGA...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGTGTCAGGGTGGGGGTaGTCTCAGCAGAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESVSGWG*SQQKAE
Trigger: TTCTGCTTTCTGCTGAGACCACCCCCACCCTGACAC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCATCTTCTTCCCCACCTaGCTCATCGTCGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESIFFPT*LIVVLI
Trigger: GATGAGGACGACGATGAGGCAGGTGGGGAAGAAGAT...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCACAGGGCTTCAGGATTaGACTGGAAGTATCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESTGLQD*TGSIAG
Trigger: CCCAGCGATACTTCCAGTGCAATCCTGAAGCCCTGT...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR GCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGCAGCGCTGCATAGGTaGTGTAGCGGGATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESAALHR*CSGISQ
Trigger: TTGAGAAATCCCGCTACAGCACCTATGCAGCGCTGC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGACCAGGTATCCCCCTaGTTCAGGAATCCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESDQVSP*FRNPVS
Trigger: TGACACTGGATTCCTGAACCAGGGGGATACCTGGTC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR TCA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCTTCGAACACACAACTaGAAGAGTCAGGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: LMGVEAVQRARPTEAGESLRTHN*KSQAHQ
Trigger: CTGATGGGCCTGACTCTTTCAGTTGTGTGTTCGAAG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 90 bp AGCGCTGCGGCCAGCCGTAGCACAGGGTCTCCGCGCCGCGGTGGGTaGGCCCGTAGCGCACGGAGCACAGCGAGCGCGAGCGCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: SAAASRSTGSPRRGG*ARSARSTASASAAA
Trigger: GGCGGCTGCGCTCGCGCTCGCTGTGCTCCGTGCGCTACGGGCGCACCCACCGCGGCGCGGAGACCCTGTGCTACGGCTGGCCGCAGCGCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461698.5
CDS CCA 90 bp CGCACGGAGCACAGCGAGCGCGAGCGCAGCCGCCCGGCGCTGCTGTaGATGCTGTTGACGCCGATCATGCTGGCCCGGCCGGCGCGCCGC +
Preference number: 5 (lower is better)
Translates to: RTEHSERERSRPALL*MLLTPIMLARPARR
Trigger: GCGGCGCGCCGGCCGGGCCAGCATGATCGGCGTCAACAGCATCCACAGCAGCGCCGGGCGGCTGCGCTCGCGCTCGCTGTGCTCCGTGCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461698.5
CDS CCA 90 bp GCCAGCTGCTCCGGCTGCAGCGCGTTAGCCGGGCCTTCCGGTCGCTaGTGCAGCTTCACCTGGCCGGGCTGCGTCGCTTCGATGCCGCGC +
Preference number: 5 (lower is better)
Translates to: ASCSGCSALAGPSGR*CSFTWPGCVASMPR
Trigger: GCGCGGCATCGAAGCGACGCAGCCCGGCCAGGTGAAGCTGCACCAGCGACCGGAAGGCCCGGCTAACGCGCTGCAGCCGGAGCAGCTGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS GCA 90 bp AGCTGCTCCGGCTGCAGCGCGTTAGCCGGGCCTTCCGGTCGCTGGTaGAGCTTCACCTGGCCGGGCTGCGTCGCTTCGATGCCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SCSGCSALAGPSGRW*SFTWPGCVASMPRR
Trigger: CCTGCGCGGCATCGAAGCGACGCAGCCCGGCCAGGTGAAGCTGCACCAGCGACCGGAAGGCCCGGCTAACGCGCTGCAGCCGGAGCAGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS-3UTR CAA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCGCCATGGCCTTCAGCTaGGCCTCGTGGGTCCGCACC +
Preference number: 5 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSAMAFS*ASWVRT
Trigger: GGTGCGGACCCACGAGGCCAAGCTGAAGGCCATGGC...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 90 bp CCGGGCCTTCGGGGAGCCAGCGGCGTGGGCATCGTGGTGGGGAGATaGCACAGTCGCCTTCCGAGCAGAAGCGCATGGCACCCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: PGLRGASGVGIVVGR*HSRLPSRSAWHPGP
Trigger: TGGCCCAGGGTGCCATGCGCTTCTGCTCGGAAGGCGACTGTGCCATCTCCCCACCACGATGCCCACGCCGCTGGCTCCCCGAAGGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000472685.5
ENST00000492902.2
CDS CCA 90 bp CTGGGGCACCGGGCCTTCGGGGAGCCAGCGGCGTGGGCATCGTGGTaGGGAGATGGCACAGTCGCCTTCCGAGCAGAAGCGCATGGCACC +
Preference number: 5 (lower is better)
Translates to: LGHRAFGEPAAWASW*GDGTVAFRAEAHGT
Trigger: GGTGCCATGCGCTTCTGCTCGGAAGGCGACTGTGCCATCTCCCCACCACGATGCCCACGCCGCTGGCTCCCCGAAGGCCCGGTGCCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000472685.5
ENST00000492902.2
CDS CCA 90 bp AGGGAGTGGGCCGGGCCGTGGGGCAGGTGGGTAGGCAGTGCCTGGTaGGCCCTCAGAGCTGGGCTGACTTTCGATGGCCGAGTCGGCCTC +
Preference number: 5 (lower is better)
Translates to: REWAGPWGRWVGSAW*ALRAGLTFDGRVGL
Trigger: GAGGCCGACTCGGCCATCGAAAGTCAGCCCAGCTCTGAGGGCCCACCAGGCACTGCCTACCCACCTGCCCCACGGCCCGGCCCACTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCCCCCGCTGATCCGCTaGATGACCTTGGGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSPPLIR*MTLGLG
Trigger: CCCCAACCCCAAGGTCATCAAGCGGATCAGCGGGGG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCTCTTCCAGCCCCGCTaGCCCCGAGGTGTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSLFQPR*PRGVFL
Trigger: CAGGAAGACACCTCGGGGCAAGCGGGGCTGGAAGAG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCCCCGCTGATCCGCTaGATGACCTTGGGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPPLIR*MTLGLG
Trigger: CCCCAACCCCAAGGTCATCAAGCGGATCAGCGGGGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCTCTTCCAGCCCCGCTaGCCCCGAGGTGTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHLFQPR*PRGVFL
Trigger: CAGGAAGACACCTCGGGGCAAGCGGGGCTGGAAGAG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGCCATGGCCTTCAGCTaGGCCTCGTGGGTCCGCACC +
Preference number: 5 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAAMAFS*ASWVRT
Trigger: GGTGCGGACCCACGAGGCCAAGCTGAAGGCCATGGC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCCAGGTATGGGGCCTaGGCATGGACGCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPRYGA*AWTPFL
Trigger: GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCCAGGTATGGGGCCTaGGCATGGACGCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLPRYGA*AWTPFL
Trigger: GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCAGCCGTAACTTCCGGTaGGAGCCAGGCCCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLSRNFR*EPGPRA
Trigger: AGCCCTTGGGCCTGGCTCCAACCGGAAGTTACGGCT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACAGCCGTAACTTCCGGTaGGAGCCAGGCCCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHSRNFR*EPGPRA
Trigger: AGCCCTTGGGCCTGGCTCCAACCGGAAGTTACGGCT...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCTGTCTCGGAGTACTaGGCTGCTCGCCCCACAGCC +
Preference number: 5 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHSVSEY*AARPTA
Trigger: GGCTGTGGGGCGAGCAGCCAAGTACTCCGAGACAGA...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCCCGTGGAGATCCGTGTaGAGCAGCATGAGCGCACAG +
Preference number: 5 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSPWRSV*SSMSAQ
Trigger: CTGTGCGCTCATGCTGCTCAACACGGATCTCCACGG...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGCTCCCGCAGCTCACTaGCCATGGCCTTCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLAPAAH*PWPSAW
Trigger: CCAAGCTGAAGGCCATGGCAAGTGAGCTGCGGGAGC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTGCCTGCCTTCAGCTaGACCCGAAGCAGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLLPAFS*TRSSAA
Trigger: TGCAGCGCTGCTTCGGGTCAAGCTGAAGGCAGGCAG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 90 bp CTTCTTCCCCACCTGCCTCATCGTCGTCCTCATCCTCATTGCCACTaGCGAGGCTGGGATGAGGGCCAGGGAGTGGGCCGGGCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: LLPHLPHRRPHPHCH*RGWDEGQGVGRAVG
Trigger: CCCCACGGCCCGGCCCACTCCCTGGCCCTCATCCCAGCCTCGGCAGTGGCAATGAGGATGAGGACGACGATGAGGCAGGTGGGGAAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 90 bp GCCGTAACTTCCGGTTGGAGCCAGGCCCAAGGGCTGGGGTGGGCCTaGGAGGAGAAACCCCACCCAGATCCCAGCTCCGACTCAAGCCCC +
Preference number: 5 (lower is better)
Translates to: AVTSGWSQAQGLGWA*EEKPHPDPSSDSSP
Trigger: GGGGCTTGAGTCGGAGCTGGGATCTGGGTGGGGTTTCTCCTCCCAGGCCCACCCCAGCCCTTGGGCCTGGCTCCAACCGGAAGTTACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000020673.6
ENST00000406432.5
CDS CCA 90 bp CCTCCTCGTCTCTGCAGGTGTGATCACCTCAGAGGGGGCTGGCCATaGAGCCGCGGCCCCCGCTTCAGTTCTGGCCTCTGCTCGCCATGG +
Preference number: 5 (lower is better)
Translates to: PPRLCRCDHLRGGWP*SRGPRFSSGLCSPW
Trigger: CCATGGCGAGCAGAGGCCAGAACTGAAGCGGGGGCCGCGGCTCCATGGCCAGCCCCCTCTGAGGTGATCACACCTGCAGAGACGAGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488194.1
CDS CCA 90 bp CGGGGAGTGGGTCTGATGTGGATGCTTCCAGCCGTAACTTCCGGTTaGAGCCAGGCCCAAGGGCTGGGGTGGGCCGCTGCTCGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: RGVGLMWMLPAVTSG*SQAQGLGWAAARPE
Trigger: CTCTGGGCGAGCAGCGGCCCACCCCAGCCCTTGGGCCTGGCTCCAACCGGAAGTTACGGCTGGAAGCATCCACATCAGACCCACTCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCAAGGGCACAGGTGACTaGAGAGGCATCCGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLKGTGD*RGIRLP
Trigger: AGGGAGCCGGATGCCTCTCAAGTCACCTGTGCCCTT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACCCGTGGAGATCCGTGTaGAGCAGCATGAGCGCACAG +
Preference number: 5 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHPWRSV*SSMSAQ
Trigger: CTGTGCGCTCATGCTGCTCAACACGGATCTCCACGG...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAAAGTCGCCGCCATCATaGAGGCCCTCCAGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAKSPPS*RPSRFP
Trigger: CGGGAACCTGGAGGGCCTCAATGATGGCGGCGACTT...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACATCCGCTTGATGACCTaGGGGTTGGGGTCGGCCAAC +
Preference number: 5 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHIRLMT*GLGSAN
Trigger: GTTGGCCGACCCCAACCCCAAGGTCATCAAGCGGAT...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACCCCCGCTGATCCGCTaGATGACCTTGGGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPPPLIR*MTLGLG
Trigger: CCCCAACCCCAAGGTCATCAAGCGGATCAGCGGGGG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACAGGGCCTTCCCAGGCTaGTACTCCTCCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHRAFPG*YSSFCR
Trigger: CCTGCAGAAGGAGGAGTACAAGCCTGGGAAGGCCCT...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCACCCAGGTATGGGGCCTaGGCATGGACGCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPPRYGA*AWTPFL
Trigger: GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGG...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 90 bp CCCTCACACCCTTCTCCACCAGGACAGCCCCGGGCCTGCCTCCGCTaGCTCAACCACATCCAGCCCCAGGCTTTGCTCACGGTTTGTGGG +
Preference number: 5 (lower is better)
Translates to: PSHPSPPGQPRACLR*LNHIQPQALLTVCG
Trigger: CCCACAAACCGTGAGCAAAGCCTGGGGCTGGATGTGGTTGAGCCAGCGGAGGCAGGCCCGGGGCTGTCCTGGTGGAGAAGGGTGTGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473507.1
CDS-3UTR CAA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCATCTGTCTCGGAGTACTaGGCTGCTCGCCCCACAGCC +
Preference number: 5 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPSVSEY*AARPTA
Trigger: GGCTGTGGGGCGAGCAGCCAAGTACTCCGAGACAGA...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAAAGGGCACAGGTGACTaGAGAGGCATCCGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAKGTGD*RGIRLP
Trigger: AGGGAGCCGGATGCCTCTCAAGTCACCTGTGCCCTT...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCTGAAGTCATTGTTCTaGCCCAGGTGCCGGGCCACA +
Preference number: 5 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLLKSLF*PRCRAT
Trigger: TGTGGCCCGGCACCTGGGCAAGAACAATGACTTCAG...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACGAGCTGTACAAGGCCTaGAGCAGCTCCCTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHELYKA*SSSLGK
Trigger: CTTCCCTAGGGAGCTGCTCAAGGCCTTGTACAGCTC...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCTTGATGACCTTGGGGTaGGGGTCGGCCAACTCAGAC +
Preference number: 5 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLLMTLG*GSANSD
Trigger: GTCTGAGTTGGCCGACCCCAACCCCAAGGTCATCAA...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTTGATGACCTTGGGGTaGGGGTCGGCCAACTCAGAC +
Preference number: 5 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHLMTLG*GSANSD
Trigger: GTCTGAGTTGGCCGACCCCAACCCCAAGGTCATCAA...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAATCCGCTTGATGACCTaGGGGTTGGGGTCGGCCAAC +
Preference number: 5 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAIRLMT*GLGSAN
Trigger: GTTGGCCGACCCCAACCCCAAGGTCATCAAGCGGAT...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCTCTTCCAGCCCCGCTaGCCCCGAGGTGTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: GVEAVQRARPTEAGESQALFQPR*PRGVFL
Trigger: CAGGAAGACACCTCGGGGCAAGCGGGGCTGGAAGAG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAAGGGCCTTCCCAGGCTaGTACTCCTCCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RPARAQAGPCHPSGAQQARAFPG*YSSFCR
Trigger: CCTGCAGAAGGAGGAGTACAAGCCTGGGAAGGCCCT...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCGCGGCTGAACTTCTTTaGGGAGCTAACAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSAAELL*GANSSW
Trigger: CCAGCTGCTGTTAGCTCCCAAAAGAAGTTCAGCCGC...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS TCA 90 bp GCCCATTCAGTGGCCTCACACTGGCCTTCTCCACAAAGCGGAAGATaGCCACAGAGCTCTGGGCCCCGGGTGGGGGCTGCCCAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: AHSVASHWPSPQSGR*PQSSGPRVGAAQWV
Trigger: CACCCACTGGGCAGCCCCCACCCGGGGCCCAGAGCTCTGTGGTCATCTTCCGCTTTGTGGAGAAGGCCAGTGTGAGGCCACTGAATGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000472685.5
CDS GCA 90 bp GGTCGGCCAACTCAGACAGAGAGCGTCTCAGCTCCTCCTCGTCTCTaGAGGTGTGATCACCTCAGAGGGGGCTGGCCATGGAGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: GRPTQTESVSAPPRL*RCDHLRGGWPWSRG
Trigger: GCCGCGGCTCCATGGCCAGCCCCCTCTGAGGTGATCACACCTGCAGAGACGAGGAGGAGCTGAGACGCTCTCTGTCTGAGTTGGCCGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473507.1
ENST00000488194.1
CDS CCA 90 bp TGCCAGGTAGGGCCGAGCCTCCTCTGGCGGGGAGTGGGTCTGATGTaGATGCTTCCAGCCGTAACTTCCGGTTGGAGCCAGGCCCAAGGG +
Preference number: 5 (lower is better)
Translates to: CQVGPSLLWRGVGLM*MLPAVTSGWSQAQG
Trigger: CCCTTGGGCCTGGCTCCAACCGGAAGTTACGGCTGGAAGCATCCACATCAGACCCACTCCCCGCCAGAGGAGGCTCGGCCCTACCTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCAGTTTGCTGAAGTCATaGTTCTTGCCCAGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSSLLKS*FLPRCR
Trigger: CCGGCACCTGGGCAAGAACAATGACTTCAGCAAACT...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCGACAGGGCTTCAGGATaGCACTGGAAGTATCGCTGG +
Preference number: 5 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLDRASG*HWKYRW
Trigger: CCAGCGATACTTCCAGTGCAATCCTGAAGCCCTGTC...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACGACAGGGCTTCAGGATaGCACTGGAAGTATCGCTGG +
Preference number: 5 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHDRASG*HWKYRW
Trigger: CCAGCGATACTTCCAGTGCAATCCTGAAGCCCTGTC...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCAAGTCGCCGCCATCATaGAGGCCCTCCAGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: GVEAVQRARPTEAGESQAKSPPS*RPSRFP
Trigger: CGGGAACCTGGAGGGCCTCAATGATGGCGGCGACTT...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACGCGGCTGAACTTCTTTaGGGAGCTAACAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHAAELL*GANSSW
Trigger: CCAGCTGCTGTTAGCTCCCAAAAGAAGTTCAGCCGC...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGCTCCCGCAGCTCACTaGCCATGGCCTTCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: GVEAVQRARPTEAGESQAAPAAH*PWPSAW
Trigger: CCAAGCTGAAGGCCATGGCAAGTGAGCTGCGGGAGC...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCTGCCTGCCTTCAGCTaGACCCGAAGCAGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: GVEAVQRARPTEAGESQALPAFS*TRSSAA
Trigger: TGCAGCGCTGCTTCGGGTCAAGCTGAAGGCAGGCAG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS TCA 90 bp AACTCAGACAGAGAGCGTCTCAGCTCCTCCTCGTCTCTGCAGGTGTaGTCACCTCAGAGGGGGCTGGCCATGGAGCCGCGGCCCCCGCTT +
Preference number: 5 (lower is better)
Translates to: NSDRERLSSSSSLQV*SPQRGLAMEPRPPL
Trigger: AAGCGGGGGCCGCGGCTCCATGGCCAGCCCCCTCTGAGGTGATCACACCTGCAGAGACGAGGAGGAGCTGAGACGCTCTCTGTCTGAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000473507.1
ENST00000488194.1
CDS GCA 90 bp GAGTCCATCCTCTGTGCTCCCGGCCTGGGCCAGTGCTGCCTCCACTaGATCCAGCTCCTCACTGCCTGCCTTCAGCTTGACCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: ESILCAPGLGQCCLH*IQLLTACLQLDPKQ
Trigger: CTGCTTCGGGTCAAGCTGAAGGCAGGCAGTGAGGAGCTGGATGCAGTGGAGGCAGCACTGGCCCAGGCCGGGAGCACAGAGGATGGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 90 bp TCCCAGCAAGTAGGGCCAGCACTATCCTCTCCATTGCTGCACACCTaGAGCCCTCACACCCTTCTCCACCAGGACAGCCCCGGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: SQQVGPALSSPLLHT*SPHTLLHQDSPGPA
Trigger: GGCAGGCCCGGGGCTGTCCTGGTGGAGAAGGGTGTGAGGGCTGCAGGTGTGCAGCAATGGAGAGGATAGTGCTGGCCCTACTTGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473507.1
CDS-3UTR CAA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCAGTTTGCTGAAGTCATaGTTCTTGCCCAGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLSLLKS*FLPRCR
Trigger: CCGGCACCTGGGCAAGAACAATGACTTCAGCAAACT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGAAGTCGCCGCCATCATaGAGGCCCTCCAGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: EAVQRARPTEAGESQAVLKSPPS*RPSRFP
Trigger: CGGGAACCTGGAGGGCCTCAATGATGGCGGCGACTT...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCATCCGCTTGATGACCTaGGGGTTGGGGTCGGCCAAC +
Preference number: 5 (lower is better)
Translates to: GVEAVQRARPTEAGESQAIRLMT*GLGSAN
Trigger: GTTGGCCGACCCCAACCCCAAGGTCATCAAGCGGAT...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCAGGGCCTTCCCAGGCTaGTACTCCTCCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GVEAVQRARPTEAGESQARAFPG*YSSFCR
Trigger: CCTGCAGAAGGAGGAGTACAAGCCTGGGAAGGCCCT...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCCATGCTGATGGCATTCTaGAGCTCCGTCTCTGAAAGG +
Preference number: 5 (lower is better)
Translates to: GRAAPGPGMGPWHGRPSSMLMAF*SSVSER
Trigger: CCTTTCAGAGACGGAGCTCAAGAATGCCATCAGCAT...GGAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAGCGGCTGAACTTCTTTaGGGAGCTAACAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: RPARAQAGPCHPSGAQQAAAELL*GANSSW
Trigger: CCAGCTGCTGTTAGCTCCCAAAAGAAGTTCAGCCGC...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCAGAAAGAGTAAGCCCTaGGGGAGGAAGGAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLRKSKP*GRKEGK
Trigger: TTTCCCCTCCTTCCTCCCCAAGGGCTTACTCTTTCT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCAAACTTGACCCCTTTCTaGTCTCTCCCCGCTGCTAGC +
Preference number: 5 (lower is better)
Translates to: RPARAQAGPCHPSGAQQANLTPF*SLPAAS
Trigger: GCTAGCAGCGGGGAGAGACAAGAAAGGGGTCAAGTT...TGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406432.5
CDS GCA 90 bp GCGCAGCCTCCAGGTCCGCTTTCTGCCCATTGGACAAGGTGTCTGTaGTTCCCAGGGCCAGCCGCTCTGTGCTGTCCAGCTCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: AQPPGPLSAHWTRCL*FPGPAALCCPALSL
Trigger: CAGACTCAGAGCTGGACAGCACAGAGCGGCTGGCCCTGGGAAGCACAGACACCTTGTCCAATGGGCAGAAAGCGGACCTGGAGGCTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 90 bp AGGTCAGCGTGTGGGCGCCGTCCTCTGAGGACAGGGCTTCAGGATTaGACTGGAAGTATCGCTGGGAGAAGTGGGCCAGCACGCGCTCTC +
Preference number: 5 (lower is better)
Translates to: RSACGRRPLRTGLQD*TGSIAGRSGPARAL
Trigger: GAGAGCGCGTGCTGGCCCACTTCTCCCAGCGATACTTCCAGTGCAATCCTGAAGCCCTGTCCTCAGAGGACGGCGCCCACACGCTGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 90 bp ATAACGGAGGCGGACTCGCAGGTAATAGTGGCCCCGGGACGCCAGTaGCAACGCCCCTTTACTCGCAGGTTCCTGGACCTGCCCTGGGAA +
Preference number: 5 (lower is better)
Translates to: ITEADSQVIVAPGRQ*QRPFTRRFLDLPWE
Trigger: TTCCCAGGGCAGGTCCAGGAACCTGCGAGTAAAGGGGCGTTGGCACTGGCGTCCCGGGGCCACTATTACCTGCGAGTCCGCCTCCGTTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS CCA 90 bp GCCCATGTACAAGGTTCCGGCTGCCAGGTAGGGCCGAGCCTCCTCTaGCGGGGAGTGGGTCTGATGTGGATGCTTCCAGCCGTAACTTCC +
Preference number: 5 (lower is better)
Translates to: AHVQGSGCQVGPSLL*RGVGLMWMLPAVTS
Trigger: GGAAGTTACGGCTGGAAGCATCCACATCAGACCCACTCCCCGCCAGAGGAGGCTCGGCCCTACCTGGCAGCCGGAACCTTGTACATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 90 bp AGCGTGTGGGCGCCGTCCTCTGAGGACAGGGCTTCAGGATTGCACTaGAAGTATCGCTGGGAGAAGTGGGCCAGCACGCGCTCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: SVWAPSSEDRASGLH*KYRWEKWASTRSRS
Trigger: GGAACGAGAGCGCGTGCTGGCCCACTTCTCCCAGCGATACTTCCAGTGCAATCCTGAAGCCCTGTCCTCAGAGGACGGCGCCCACACGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 90 bp AAATCTTACTGCGCACGCGCAATAGACAGCCGATGGAGCCACCGATaGAGCCGTCCGGAGGGGAGCAAGAGCCCGGAGCCGTCAGGTACC +
Preference number: 5 (lower is better)
Translates to: KSYCARAIDSRWSHR*SRPEGSKSPEPSGT
Trigger: GGTACCTGACGGCTCCGGGCTCTTGCTCCCCTCCGGACGGCTCCATCGGTGGCTCCATCGGCTGTCTATTGCGCGTGCGCAGTAAGATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS-3UTR CAA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCCTGAAGTCATTGTTCTaGCCCAGGTGCCGGGCCACA +
Preference number: 5 (lower is better)
Translates to: GVEAVQRARPTEAGESQALKSLF*PRCRAT
Trigger: TGTGGCCCGGCACCTGGGCAAGAACAATGACTTCAG...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGCCGTGGAGATCCGTGTaGAGCAGCATGAGCGCACAG +
Preference number: 5 (lower is better)
Translates to: EAVQRARPTEAGESQAVLPWRSV*SSMSAQ
Trigger: CTGTGCGCTCATGCTGCTCAACACGGATCTCCACGG...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp AGGCCGTGCTGCCCCCGGCCCAGGTATGGGGCCTTGGCATGGACGCCCTTCCTCATGCTGATGGCATTCTaGAGCTCCGTCTCTGAAAGG +
Preference number: 5 (lower is better)
Translates to: RPCCPRPRYGALAWTPFLMLMAF*SSVSER
Trigger: CCTTTCAGAGACGGAGCTCAAGAATGCCATCAGCAT...GAGGAAGGGCGTCCATGCCAAGGCCCCATACCTGGGCCGGGGGCAGCACGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGCCGGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACATAGCGGCTACTACATaGATGCGAGTGATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: GRPGLRQGHVILQVPSRHIAATT*MRVIQD
Trigger: GTCCTGGATCACTCGCATCAATGTAGTAGCCGCTAT...GTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 90 bp CAGGTGAGGCCAAGGCCTCCAGCGAGGCGAGGCTGGTATAGGAGGTaGCTTTGGCCCGGTGTGACTCCAGGATGGCTTCGAACACACAAC +
Preference number: 5 (lower is better)
Translates to: QVRPRPPARRGWYRR*LWPGVTPGWLRTHN
Trigger: GTTGTGTGTTCGAAGCCATCCTGGAGTCACACCGGGCCAAAGGCACCTCCTATACCAGCCTCGCCTCGCTGGAGGCCTTGGCCTCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 90 bp CCGTCCTCTGAGGACAGGGCTTCAGGATTGCACTGGAAGTATCGCTaGGAGAAGTGGGCCAGCACGCGCTCTCGTTCCTGGGTCTCACCC +
Preference number: 5 (lower is better)
Translates to: PSSEDRASGLHWKYR*EKWASTRSRSWVSP
Trigger: GGGTGAGACCCAGGAACGAGAGCGCGTGCTGGCCCACTTCTCCCAGCGATACTTCCAGTGCAATCCTGAAGCCCTGTCCTCAGAGGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 90 bp GCCAAAGCGAGAAAATCTTACTGCGCACGCGCAATAGACAGCCGATaGAGCCACCGATGGAGCCGTCCGGAGGGGAGCAAGAGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: AKARKSYCARAIDSR*SHRWSRPEGSKSPE
Trigger: CTCCGGGCTCTTGCTCCCCTCCGGACGGCTCCATCGGTGGCTCCATCGGCTGTCTATTGCGCGTGCGCAGTAAGATTTTCTCGCTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS-3UTR CAA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGAGCTGTACAAGGCCTaGAGCAGCTCCCTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: EAVQRARPTEAGESQAVLELYKA*SSSLGK
Trigger: CTTCCCTAGGGAGCTGCTCAAGGCCTTGTACAGCTC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCTCTGTCTCGGAGTACTaGGCTGCTCGCCCCACAGCC +
Preference number: 5 (lower is better)
Translates to: LMGVEAVQRARPTEAGESSVSEY*AARPTA
Trigger: GGCTGTGGGGCGAGCAGCCAAGTACTCCGAGACAGA...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGGACAGGGCTTCAGGATaGCACTGGAAGTATCGCTGG +
Preference number: 5 (lower is better)
Translates to: EAVQRARPTEAGESQAVLDRASG*HWKYRW
Trigger: CCAGCGATACTTCCAGTGCAATCCTGAAGCCCTGTC...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp CCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTGCCCAGCAGGCACTCCCCAATAGCGGCTACTACATaGATGCGAGTGATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: PGLRQGHVILQVPSRHSPIAATT*MRVIQD
Trigger: GTCCTGGATCACTCGCATCAATGTAGTAGCCGCTAT...TGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGCTCCCGCAGCTCACTaGCCATGGCCTTCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: LMGVEAVQRARPTEAGESAPAAH*PWPSAW
Trigger: CCAAGCTGAAGGCCATGGCAAGTGAGCTGCGGGAGC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS TCA 90 bp CTCCAGCGAGGCGAGGCTGGTATAGGAGGTGCCTTTGGCCCGGTGTaGCTCCAGGATGGCTTCGAACACACAACTGAAAGAGTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LQRGEAGIGGAFGPV*LQDGFEHTTERVRP
Trigger: GGGCCTGACTCTTTCAGTTGTGTGTTCGAAGCCATCCTGGAGTCACACCGGGCCAAAGGCACCTCCTATACCAGCCTCGCCTCGCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 90 bp CGGGTTTGGTGCGGCCACTCCAAGGCCAAAGCGAGAAAATCTTACTaGGCACGCGCAATAGACAGCCGATGGAGCCACCGATGGAGCCGT +
Preference number: 5 (lower is better)
Translates to: RVWCGHSKAKARKSY*ARAIDSRWSHRWSR
Trigger: ACGGCTCCATCGGTGGCTCCATCGGCTGTCTATTGCGCGTGCGCAGTAAGATTTTCTCGCTTTGGCCTTGGAGTGGCCGCACCAAACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS-3UTR CAA 90 bp GAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCGTGCTGAGTTTGCTGAAGTCATaGTTCTTGCCCAGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: EAVQRARPTEAGESQAVLSLLKS*FLPRCR
Trigger: CCGGCACCTGGGCAAGAACAATGACTTCAGCAAACT...CAGCACGGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp GGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCAGGCCATAGCGGCTACTACATaGATGCGAGTGATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: GVEAVQRARPTEAGESQAIAATT*MRVIQD
Trigger: GTCCTGGATCACTCGCATCAATGTAGTAGCCGCTAT...GGCCTGGCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS TCA 90 bp TGCCTTTGGCCCGGTGTGACTCCAGGATGGCTTCGAACACACAACTaGAAGAGTCAGGCCCATCAGCCGAGGGGCTCGTCCCAGGTAGAA +
Preference number: 5 (lower is better)
Translates to: CLWPGVTPGWLRTHN*KSQAHQPRGSSQVE
Trigger: TTCTACCTGGGACGAGCCCCTCGGCTGATGGGCCTGACTCTTTCAGTTGTGTGTTCGAAGCCATCCTGGAGTCACACCGGGCCAAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 90 bp TTCAGAGGCCTCAAACACCTCGTCGTCCACATCTTCTTCCCCACCTaGCTCATCGTCGTCCTCATCCTCATTGCCACTGCCGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: FRGLKHLVVHIFFPT*LIVVLILIATAEAG
Trigger: CCCAGCCTCGGCAGTGGCAATGAGGATGAGGACGACGATGAGGCAGGTGGGGAAGAAGATGTGGACGACGAGGTGTTTGAGGCCTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCCTGAAGTCATTGTTCTaGCCCAGGTGCCGGGCCACA +
Preference number: 5 (lower is better)
Translates to: LMGVEAVQRARPTEAGESLKSLF*PRCRAT
Trigger: TGTGGCCCGGCACCTGGGCAAGAACAATGACTTCAG...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCGAGCTGTACAAGGCCTaGAGCAGCTCCCTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: LMGVEAVQRARPTEAGESELYKA*SSSLGK
Trigger: CTTCCCTAGGGAGCTGCTCAAGGCCTTGTACAGCTC...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS TCA 90 bp GGCCAGGGCATGGTGGATGCTGATGGCATTCTTGAGCTCCGTCTCTaGAAGGGCCTTCCCAGGCTTGTACTCCTCCTTCTGCAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: GQGMVDADGILELRL*KGLPRLVLLLLQVE
Trigger: CTCTACCTGCAGAAGGAGGAGTACAAGCCTGGGAAGGCCCTTTCAGAGACGGAGCTCAAGAATGCCATCAGCATCCACCATGCCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000473507.1
ENST00000479172.5
ENST00000611678.4
CDS GCA 90 bp ATCCAGCTCCTCACTGCCTGCCTTCAGCTTGACCCGAAGCAGCGCTaGATAGGTGCTGTAGCGGGATTTCTCAAACTCCAGGTAGGCCTC +
Preference number: 5 (lower is better)
Translates to: IQLLTACLQLDPKQR*IGAVAGFLKLQVGL
Trigger: GAGGCCTACCTGGAGTTTGAGAAATCCCGCTACAGCACCTATGCAGCGCTGCTTCGGGTCAAGCTGAAGGCAGGCAGTGAGGAGCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 90 bp TGGAAGTATCGCTGGGAGAAGTGGGCCAGCACGCGCTCTCGTTCCTaGGTCTCACCCATTAAGGCCAGCTCCTTCAGAAACACCCTGAGA +
Preference number: 5 (lower is better)
Translates to: WKYRWEKWASTRSRS*VSPIKASSFRNTLR
Trigger: TCTCAGGGTGTTTCTGAAGGAGCTGGCCTTAATGGGTGAGACCCAGGAACGAGAGCGCGTGCTGGCCCACTTCTCCCAGCGATACTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCAGAAAGAGTAAGCCCTaGGGGAGGAAGGAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: LMGVEAVQRARPTEAGESRKSKP*GRKEGK
Trigger: TTTCCCCTCCTTCCTCCCCAAGGGCTTACTCTTTCT...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS-3UTR CAA 90 bp TTAATGGGGGTGGAGGCTGTACAAAGGGCAAGGCCCACTGAAGCGGGGGAAAGCATGCTGATGGCATTCTaGAGCTCCGTCTCTGAAAGG +
Preference number: 5 (lower is better)
Translates to: LMGVEAVQRARPTEAGESMLMAF*SSVSER
Trigger: CCTTTCAGAGACGGAGCTCAAGAATGCCATCAGCAT...GCTTTCCCCCGCTTCAGTGGGCCTTGCCCTTTGTACAGCCTCCACCCCCATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS TCA 90 bp TCCGTTTCGGGGTCCACCCGAAAAGCTTTCAGATCGGATCCTCGGTaGGACGGCACTCGATTAAATAGGTCTGTCTCTACAGGCCAAGGA +
Preference number: 5 (lower is better)
Translates to: SVSGSTRKAFRSDPR*DGTRLNRSVSTGQG
Trigger: TCCTTGGCCTGTAGAGACAGACCTATTTAATCGAGTGCCGTCTCACCGAGGATCCGATCTGAAAGCTTTTCGGGTGGACCCCGAAACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS GCA 90 bp GGCTCAGTCAGATACAAAATTTCGGATTCTATCTTGTCACTCCCTTaGTCAAGAACCTGTGGTAGTTCCCTGTTACTTCCCATATGGAGC +
Preference number: 5 (lower is better)
Translates to: GSVRYKISDSILSLP*SRTCGSSLLLPIWS
Trigger: GCTCCATATGGGAAGTAACAGGGAACTACCACAGGTTCTTGAGCAAGGGAGTGACAAGATAGAATCCGAAATTTTGTATCTGACTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473507.1
CDS TCA 72 bp GCGAGCGCAGCCGCCCGGCGCTGCTGTGGATGCTGTTaGCGCCGATCATGCTGGCCCGGCCGGCGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: ASAAARRCCGCC*RRSCWPGRRAA
Trigger: CGCGGCGCGCCGGCCGGGCCAGCATGATCGGCGTCAACAGCATCCACAGCAGCGCCGGGCGGCTGCGCTCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461698.5
CDS CAA 72 bp CGCGAGCGCAGCCGCCCGGCGCTGCTGTGGATGCTGTaGACGCCGATCATGCTGGCCCGGCCGGCGCGCCGC +
Preference number: 6 (lower is better)
Translates to: RERSRPALLWML*TPIMLARPARR
Trigger: GCGGCGCGCCGGCCGGGCCAGCATGATCGGCGTCAACAGCATCCACAGCAGCGCCGGGCGGCTGCGCTCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461698.5
CDS GCA 72 bp GCCAGCCGTAGCACAGGGTCTCCGCGCCGCGGTGGGTaGGCCCGTAGCGCACGGAGCACAGCGAGCGCGAGC +
Preference number: 6 (lower is better)
Translates to: ASRSTGSPRRGG*ARSARSTASAS
Trigger: GCTCGCGCTCGCTGTGCTCCGTGCGCTACGGGCGCACCCACCGCGGCGCGGAGACCCTGTGCTACGGCTGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461698.5
CDS GCA 72 bp GGTGCAGCTTCACCTGGCCGGGCTGCGTCGCTTCGATaGCGCGCAGGTGAGCCGGGGGCTGAAGCCCCGCCC +
Preference number: 6 (lower is better)
Translates to: GAASPGRAASLR*RAGEPGAEAPP
Trigger: GGGCGGGGCTTCAGCCCCCGGCTCACCTGCGCGGCATCGAAGCGACGCAGCCCGGCCAGGTGAAGCTGCACC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS CCA 72 bp CACAGCGAGCGCGAGCGCAGCCGCCCGGCGCTGCTGTaGATGCTGTTGACGCCGATCATGCTGGCCCGGCCG +
Preference number: 6 (lower is better)
Translates to: HSERERSRPALL*MLLTPIMLARP
Trigger: CGGCCGGGCCAGCATGATCGGCGTCAACAGCATCCACAGCAGCGCCGGGCGGCTGCGCTCGCGCTCGCTGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461698.5
CDS GCA 72 bp GGCTGCAGCGCGTTAGCCGGGCCTTCCGGTCGCTGGTaGAGCTTCACCTGGCCGGGCTGCGTCGCTTCGATG +
Preference number: 6 (lower is better)
Translates to: GCSALAGPSGRW*SFTWPGCVASM
Trigger: CATCGAAGCGACGCAGCCCGGCCAGGTGAAGCTGCACCAGCGACCGGAAGGCCCGGCTAACGCGCTGCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS CCA 72 bp GGGAGATGGCACAGTCGCCTTCCGAGCAGAAGCGCATaGCACCCTGGGCCATGCTGGGGCCGGGGGTCAGGC +
Preference number: 6 (lower is better)
Translates to: GRWHSRLPSRSA*HPGPCWGRGSG
Trigger: GCCTGACCCCCGGCCCCAGCATGGCCCAGGGTGCCATGCGCTTCTGCTCGGAAGGCGACTGTGCCATCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000472685.5
ENST00000492902.2
CDS CCA 72 bp CGGGCCTTCGGGGAGCCAGCGGCGTGGGCATCGTGGTaGGGAGATGGCACAGTCGCCTTCCGAGCAGAAGCG +
Preference number: 6 (lower is better)
Translates to: RAFGEPAAWASW*GDGTVAFRAEA
Trigger: CGCTTCTGCTCGGAAGGCGACTGTGCCATCTCCCCACCACGATGCCCACGCCGCTGGCTCCCCGAAGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000472685.5
ENST00000492902.2
CDS GCA 72 bp GGGCTCCCTCCCTGGGGCCAGCTTGGCTCTGGCCTCTaGCTCCTCCTCCTCCCCTCTCTGTGTCCAAGGACC +
Preference number: 6 (lower is better)
Translates to: GLPPWGQLGSGL*LLLLPSLCPRT
Trigger: GGTCCTTGGACACAGAGAGGGGAGGAGGAGGAGGCAGAGGCCAGAGCCAAGCTGGCCCCAGGGAGGGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 72 bp CGGGGAGCCAGCGGCGTGGGCATCGTGGTGGGGAGATaGCACAGTCGCCTTCCGAGCAGAAGCGCATGGCAC +
Preference number: 6 (lower is better)
Translates to: RGASGVGIVVGR*HSRLPSRSAWH
Trigger: GTGCCATGCGCTTCTGCTCGGAAGGCGACTGTGCCATCTCCCCACCACGATGCCCACGCCGCTGGCTCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000472685.5
ENST00000492902.2
CDS CCA 72 bp TGCGCACGCGCAATAGACAGCCGATGGAGCCACCGATaGAGCCGTCCGGAGGGGAGCAAGAGCCCGGAGCCG +
Preference number: 6 (lower is better)
Translates to: CARAIDSRWSHR*SRPEGSKSPEP
Trigger: CGGCTCCGGGCTCTTGCTCCCCTCCGGACGGCTCCATCGGTGGCTCCATCGGCTGTCTATTGCGCGTGCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS CAA 90 bp GCGGGGAGTGGGTCTGATGTGGATGCTTCCAGCCGTAACTTCCGGTaGGAGCCAGGCCCAAGGGCTGGGGTGGGCCGCTGCTCGCCCAGA +
Preference number: 6 (lower is better)
Translates to: AGSGSDVDASSRNFR*EPGPRAGVGRCSPR
Trigger: TCTGGGCGAGCAGCGGCCCACCCCAGCCCTTGGGCCTGGCTCCAACCGGAAGTTACGGCTGGAAGCATCCACATCAGACCCACTCCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611678.4
CDS CCA 72 bp TGCCTGGTGGGCCCTCAGAGCTGGGCTGACTTTCGATaGCCGAGTCGGCCTCCTCCCGCTCAGCCAGCACCT +
Preference number: 6 (lower is better)
Translates to: CLVGPQSWADFR*PSRPPPAQPAP
Trigger: AGGTGCTGGCTGAGCGGGAGGAGGCCGACTCGGCCATCGAAAGTCAGCCCAGCTCTGAGGGCCCACCAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 72 bp CCTCGTCTCTGCAGGTGTGATCACCTCAGAGGGGGCTaGCCATGGAGCCGCGGCCCCCGCTTCAGTTCTGGC +
Preference number: 6 (lower is better)
Translates to: PRLCRCDHLRGG*PWSRGPRFSSG
Trigger: GCCAGAACTGAAGCGGGGGCCGCGGCTCCATGGCCAGCCCCCTCTGAGGTGATCACACCTGCAGAGACGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000473507.1
ENST00000488194.1
CDS CCA 72 bp GGCCAGGTGAGGCCAAGGCCTCCAGCGAGGCGAGGCTaGTATAGGAGGTGCCTTTGGCCCGGTGTGACTCCA +
Preference number: 6 (lower is better)
Translates to: GQVRPRPPARRG*YRRCLWPGVTP
Trigger: TGGAGTCACACCGGGCCAAAGGCACCTCCTATACCAGCCTCGCCTCGCTGGAGGCCTTGGCCTCACCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS TCA 72 bp AGAGAGCGTCTCAGCTCCTCCTCGTCTCTGCAGGTGTaGTCACCTCAGAGGGGGCTGGCCATGGAGCCGCGG +
Preference number: 6 (lower is better)
Translates to: RERLSSSSSLQV*SPQRGLAMEPR
Trigger: CCGCGGCTCCATGGCCAGCCCCCTCTGAGGTGATCACACCTGCAGAGACGAGGAGGAGCTGAGACGCTCTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473507.1
ENST00000488194.1
CDS GCA 72 bp CCGCTTGCCCCGAGGTGTCTTCCTGCAGTCAGGGTCTaGGTGCACCTTTCGCACCAGGGCCCCGTGCTTGTA +
Preference number: 6 (lower is better)
Translates to: PLAPRCLPAVRV*VHLSHQGPVLV
Trigger: TACAAGCACGGGGCCCTGGTGCGAAAGGTGCACGCAGACCCTGACTGCAGGAAGACACCTCGGGGCAAGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000473507.1
ENST00000479172.5
ENST00000611678.4
CDS GCA 72 bp GGCCCGGGCTCAGGCAGGGCCATGTCATCCTTCAGGTaGCCAGCAGGCACTCCCCACCCTAAACCTCATCTC +
Preference number: 6 (lower is better)
Translates to: GPGSGRAMSSFR*PAGTPHPKPHL
Trigger: GAGATGAGGTTTAGGGTGGGGAGTGCCTGCTGGGCACCTGAAGGATGACATGGCCCTGCCTGAGCCCGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 72 bp GCGGACTCGCAGGTAATAGTGGCCCCGGGACGCCAGTaGCAACGCCCCTTTACTCGCAGGTTCCTGGACCTG +
Preference number: 6 (lower is better)
Translates to: ADSQVIVAPGRQ*QRPFTRRFLDL
Trigger: CAGGTCCAGGAACCTGCGAGTAAAGGGGCGTTGGCACTGGCGTCCCGGGGCCACTATTACCTGCGAGTCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS CCA 72 bp GCCTTCTCCACAAAGCGGAAGATGACCACAGAGCTCTaGGCCCCGGGTGGGGGCTGCCCAGTGGGTGAAGAG +
Preference number: 6 (lower is better)
Translates to: AFSTKRKMTTEL*APGGGCPVGEE
Trigger: CTCTTCACCCACTGGGCAGCCCCCACCCGGGGCCCAGAGCTCTGTGGTCATCTTCCGCTTTGTGGAGAAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000472685.5
ENST00000492902.2
CDS CCA 72 bp GGGCCGAGCCTCCTCTGGCGGGGAGTGGGTCTGATGTaGATGCTTCCAGCCGTAACTTCCGGTTGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: GPSLLWRGVGLM*MLPAVTSGWSQ
Trigger: CTGGCTCCAACCGGAAGTTACGGCTGGAAGCATCCACATCAGACCCACTCCCCGCCAGAGGAGGCTCGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 72 bp GTGCTGTCCAGCTCTGAGTCTGAGTCGGACACCAGCTaGCTCAGGGGTGGTTCGCTGCCAAGGGGTGCTGCC +
Preference number: 6 (lower is better)
Translates to: VLSSSESESDTS*LRGGSLPRGAA
Trigger: GGCAGCACCCCTTGGCAGCGAACCACCCCTGAGCCAGCTGGTGTCCGACTCAGACTCAGAGCTGGACAGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 72 bp ACCCATCCCGTGGATGATGGGGGAAGGCACTACTCCTaGGGTTCCCCGAAGCGGATCCTGGGACTGGGACCG +
Preference number: 6 (lower is better)
Translates to: THPVDDGGRHYS*GSPKRILGLGP
Trigger: CGGTCCCAGTCCCAGGATCCGCTTCGGGGAACCCCAGGAGTAGTGCCTTCCCCCATCATCCACGGGATGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS CAA 72 bp CCCTTGAGGATCCCGTGGAAGCTCTTCCAGCCCCGCTaGCCCCGAGGTGTCTTCCTGCAGTCAGGGTCTGCG +
Preference number: 6 (lower is better)
Translates to: PLRIPWKLFQPR*PRGVFLQSGSA
Trigger: CGCAGACCCTGACTGCAGGAAGACACCTCGGGGCAAGCGGGGCTGGAAGAGCTTCCACGGGATCCTCAAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000473507.1
ENST00000479172.5
ENST00000611678.4
CDS CAA 90 bp CGGGCCACATCGGCCTTCCTGAAGCCATCTAGTCGGTACAGCCTCTaGGCCAGGCGCTGCGCAGCCTCCAGGTCCGCTTTCTGCCCATTG +
Preference number: 6 (lower is better)
Translates to: RATSAFLKPSSRYSL*ARRCAASRSAFCPL
Trigger: CAATGGGCAGAAAGCGGACCTGGAGGCTGCGCAGCGCCTGGCCAAGAGGCTGTACCGACTAGATGGCTTCAGGAAGGCCGATGTGGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 72 bp CCAAGGCCTCCAGCGAGGCGAGGCTGGTATAGGAGGTaGCTTTGGCCCGGTGTGACTCCAGGATGGCTTCGA +
Preference number: 6 (lower is better)
Translates to: PRPPARRGWYRR*LWPGVTPGWLR
Trigger: TCGAAGCCATCCTGGAGTCACACCGGGCCAAAGGCACCTCCTATACCAGCCTCGCCTCGCTGGAGGCCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 72 bp GAGAGAGGAGTAAAGGCCATCTGCTCCAACCTGGGGTaGGGCTGGCGGCCCATGTACAAGGTTCCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: ERGVKAICSNLG*GWRPMYKVPAA
Trigger: GGCAGCCGGAACCTTGTACATGGGCCGCCAGCCCCACCCCAGGTTGGAGCAGATGGCCTTTACTCCTCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 72 bp GCGCCGTCCTCTGAGGACAGGGCTTCAGGATTGCACTaGAAGTATCGCTGGGAGAAGTGGGCCAGCACGCGC +
Preference number: 6 (lower is better)
Translates to: APSSEDRASGLH*KYRWEKWASTR
Trigger: GCGCGTGCTGGCCCACTTCTCCCAGCGATACTTCCAGTGCAATCCTGAAGCCCTGTCCTCAGAGGACGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CAA 72 bp TCGGCCTTCCTGAAGCCATCTAGTCGGTACAGCCTCTaGGCCAGGCGCTGCGCAGCCTCCAGGTCCGCTTTC +
Preference number: 6 (lower is better)
Translates to: SAFLKPSSRYSL*ARRCAASRSAF
Trigger: GAAAGCGGACCTGGAGGCTGCGCAGCGCCTGGCCAAGAGGCTGTACCGACTAGATGGCTTCAGGAAGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CAA 72 bp GCCTTGAGCAGCTCCCTAGGGAAGTCGCCGCCATCATaGAGGCCCTCCAGGTTCCCGATGAAGTCCCCGCAG +
Preference number: 6 (lower is better)
Translates to: ALSSSLGKSPPS*RPSRFPMKSPQ
Trigger: CTGCGGGGACTTCATCGGGAACCTGGAGGGCCTCAATGATGGCGGCGACTTCCCTAGGGAGCTGCTCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000488194.1
ENST00000611678.4
CDS CAA 90 bp CAGGTCAGCGTGTGGGCGCCGTCCTCTGAGGACAGGGCTTCAGGATaGCACTGGAAGTATCGCTGGGAGAAGTGGGCCAGCACGCGCTCT +
Preference number: 6 (lower is better)
Translates to: QVSVWAPSSEDRASG*HWKYRWEKWASTRS
Trigger: AGAGCGCGTGCTGGCCCACTTCTCCCAGCGATACTTCCAGTGCAATCCTGAAGCCCTGTCCTCAGAGGACGGCGCCCACACGCTGACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CAA 90 bp CAGGACTGCATCTGCTCCAGGCTCCTGGGGAGAAAGCACAGCCCTTaGGGACCTGGGCCCAGGGTTTCTGTCCCAGGATGCCAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: QDCICSRLLGRKHSP*GPGPRVSVPGCQSW
Trigger: CCAGGACTGGCATCCTGGGACAGAAACCCTGGGCCCAGGTCCCAAAGGGCTGTGCTTTCTCCCCAGGAGCCTGGAGCAGATGCAGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479172.5
CDS CAA 90 bp CTGTACAAGGCCTTGAGCAGCTCCCTAGGGAAGTCGCCGCCATCATaGAGGCCCTCCAGGTTCCCGATGAAGTCCCCGCAGGTCATGCGC +
Preference number: 6 (lower is better)
Translates to: LYKALSSSLGKSPPS*RPSRFPMKSPQVMR
Trigger: GCGCATGACCTGCGGGGACTTCATCGGGAACCTGGAGGGCCTCAATGATGGCGGCGACTTCCCTAGGGAGCTGCTCAAGGCCTTGTACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000488194.1
ENST00000611678.4
CDS GCA 72 bp CCAGGTCCGCTTTCTGCCCATTGGACAAGGTGTCTGTaGTTCCCAGGGCCAGCCGCTCTGTGCTGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: PGPLSAHWTRCL*FPGPAALCCPA
Trigger: AGCTGGACAGCACAGAGCGGCTGGCCCTGGGAAGCACAGACACCTTGTCCAATGGGCAGAAAGCGGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 72 bp CCTCCAGCGAGGCGAGGCTGGTATAGGAGGTGCCTTTaGCCCGGTGTGACTCCAGGATGGCTTCGAACACAC +
Preference number: 6 (lower is better)
Translates to: PPARRGWYRRCL*PGVTPGWLRTH
Trigger: GTGTGTTCGAAGCCATCCTGGAGTCACACCGGGCCAAAGGCACCTCCTATACCAGCCTCGCCTCGCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CAA 72 bp GTGTGGGCGCCGTCCTCTGAGGACAGGGCTTCAGGATaGCACTGGAAGTATCGCTGGGAGAAGTGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: VWAPSSEDRASG*HWKYRWEKWAS
Trigger: GCTGGCCCACTTCTCCCAGCGATACTTCCAGTGCAATCCTGAAGCCCTGTCCTCAGAGGACGGCGCCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS TCA 72 bp CCCGGTGTGACTCCAGGATGGCTTCGAACACACAACTaGAAGAGTCAGGCCCATCAGCCGAGGGGCTCGTCC +
Preference number: 6 (lower is better)
Translates to: PGVTPGWLRTHN*KSQAHQPRGSS
Trigger: GGACGAGCCCCTCGGCTGATGGGCCTGACTCTTTCAGTTGTGTGTTCGAAGCCATCCTGGAGTCACACCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 72 bp TGTGGGCGCCGTCCTCTGAGGACAGGGCTTCAGGATTaGACTGGAAGTATCGCTGGGAGAAGTGGGCCAGCA +
Preference number: 6 (lower is better)
Translates to: CGRRPLRTGLQD*TGSIAGRSGPA
Trigger: TGCTGGCCCACTTCTCCCAGCGATACTTCCAGTGCAATCCTGAAGCCCTGTCCTCAGAGGACGGCGCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 72 bp AGTCAGCTGTGCGCAGGTAGAAGACGTGGGGCCTCTTaGTGTAGTCACTGGCACGAGTGGCCAGGGCATGGT +
Preference number: 6 (lower is better)
Translates to: SQLCAGRRRGAS*CSHWHEWPGHG
Trigger: ACCATGCCCTGGCCACTCGTGCCAGTGACTACAGCAAGAGGCCCCACGTCTTCTACCTGCGCACAGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000479172.5
ENST00000611678.4
CDS GCA 72 bp ACTCAGACAGAGAGCGTCTCAGCTCCTCCTCGTCTCTaGAGGTGTGATCACCTCAGAGGGGGCTGGCCATGG +
Preference number: 6 (lower is better)
Translates to: TQTESVSAPPRL*RCDHLRGGWPW
Trigger: CCATGGCCAGCCCCCTCTGAGGTGATCACACCTGCAGAGACGAGGAGGAGCTGAGACGCTCTCTGTCTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473507.1
ENST00000488194.1
CDS CCA 72 bp CGCTGGGAGAAGTGGGCCAGCACGCGCTCTCGTTCCTaGGTCTCACCCATTAAGGCCAGCTCCTTCAGAAAC +
Preference number: 6 (lower is better)
Translates to: RWEKWASTRSRS*VSPIKASSFRN
Trigger: GTTTCTGAAGGAGCTGGCCTTAATGGGTGAGACCCAGGAACGAGAGCGCGTGCTGGCCCACTTCTCCCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CCA 72 bp GAGGACAGGGCTTCAGGATTGCACTGGAAGTATCGCTaGGAGAAGTGGGCCAGCACGCGCTCTCGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: EDRASGLHWKYR*EKWASTRSRSW
Trigger: CCAGGAACGAGAGCGCGTGCTGGCCCACTTCTCCCAGCGATACTTCCAGTGCAATCCTGAAGCCCTGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS CAA 72 bp GAAGTGGTTTTCGTTGTGATGAGCCAGCTGAAGCGGTaGCACCGGAGCGCCAGACCGTCAGCGGTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: EVVFVVMSQLKR*HRSARPSAVQW
Trigger: CCACTGCACCGCTGACGGTCTGGCGCTCCGGTGCAACCGCTTCAGCTGGCTCATCACAACGAAAACCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS CAA 72 bp CGAGTGGCCAGGGCATGGTGGATGCTGATGGCATTCTaGAGCTCCGTCTCTGAAAGGGCCTTCCCAGGCTTG +
Preference number: 6 (lower is better)
Translates to: RVARAWWMLMAF*SSVSERAFPGL
Trigger: CAAGCCTGGGAAGGCCCTTTCAGAGACGGAGCTCAAGAATGCCATCAGCATCCACCATGCCCTGGCCACTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000473507.1
ENST00000479172.5
ENST00000611678.4
CDS CAA 90 bp TCACTGGCACGAGTGGCCAGGGCATGGTGGATGCTGATGGCATTCTaGAGCTCCGTCTCTGAAAGGGCCTTCCCAGGCTTGTACTCCTCC +
Preference number: 6 (lower is better)
Translates to: SLARVARAWWMLMAF*SSVSERAFPGLYSS
Trigger: GGAGGAGTACAAGCCTGGGAAGGCCCTTTCAGAGACGGAGCTCAAGAATGCCATCAGCATCCACCATGCCCTGGCCACTCGTGCCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000473507.1
ENST00000479172.5
ENST00000611678.4
CDS GCA 72 bp TGCGGCCACTCCAAGGCCAAAGCGAGAAAATCTTACTaGGCACGCGCAATAGACAGCCGATGGAGCCACCGA +
Preference number: 6 (lower is better)
Translates to: CGHSKAKARKSY*ARAIDSRWSHR
Trigger: TCGGTGGCTCCATCGGCTGTCTATTGCGCGTGCGCAGTAAGATTTTCTCGCTTTGGCCTTGGAGTGGCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS TCA 72 bp GGCGAGGCTGGTATAGGAGGTGCCTTTGGCCCGGTGTaGCTCCAGGATGGCTTCGAACACACAACTGAAAGA +
Preference number: 6 (lower is better)
Translates to: GEAGIGGAFGPV*LQDGFEHTTER
Trigger: TCTTTCAGTTGTGTGTTCGAAGCCATCCTGGAGTCACACCGGGCCAAAGGCACCTCCTATACCAGCCTCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 72 bp CTCAAACACCTCGTCGTCCACATCTTCTTCCCCACCTaGCTCATCGTCGTCCTCATCCTCATTGCCACTGCC +
Preference number: 6 (lower is better)
Translates to: LKHLVVHIFFPT*LIVVLILIATA
Trigger: GGCAGTGGCAATGAGGATGAGGACGACGATGAGGCAGGTGGGGAAGAAGATGTGGACGACGAGGTGTTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 72 bp GCCACCAGTTTGCTGAAGTCATTGTTCTTGCCCAGGTaGCGGGCCACATCGGCCTTCCTGAAGCCATCTAGT +
Preference number: 6 (lower is better)
Translates to: ATSLLKSLFLPR*RATSAFLKPSS
Trigger: ACTAGATGGCTTCAGGAAGGCCGATGTGGCCCGGCACCTGGGCAAGAACAATGACTTCAGCAAACTGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS GCA 72 bp ATAGCGGCTACTACATTGATGCGAGTGATCCAGGACTaGATCTGCTCCAGGCTCGGGGCCTGGAAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: IAATTLMRVIQD*ICSRLGAWKRK
Trigger: CTTCCTCTTCCAGGCCCCGAGCCTGGAGCAGATGCAGTCCTGGATCACTCGCATCAATGTAGTAGCCGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000611678.4
CDS TCA 72 bp ATGGTGGATGCTGATGGCATTCTTGAGCTCCGTCTCTaGAAGGGCCTTCCCAGGCTTGTACTCCTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: MVDADGILELRL*KGLPRLVLLLL
Trigger: CAGAAGGAGGAGTACAAGCCTGGGAAGGCCCTTTCAGAGACGGAGCTCAAGAATGCCATCAGCATCCACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000020673.6
ENST00000406432.5
ENST00000473507.1
ENST00000479172.5
ENST00000611678.4
CDS TCA 72 bp GGGTCCACCCGAAAAGCTTTCAGATCGGATCCTCGGTaGGACGGCACTCGATTAAATAGGTCTGTCTCTACA +
Preference number: 6 (lower is better)
Translates to: GSTRKAFRSDPR*DGTRLNRSVST
Trigger: TGTAGAGACAGACCTATTTAATCGAGTGCCGTCTCACCGAGGATCCGATCTGAAAGCTTTTCGGGTGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492902.2
CDS CCA 72 bp TCAAGAACCTGTGGTAGTTCCCTGTTACTTCCCATATaGAGCCTACACTGCATCTCCCCCAACAGTGTTTTT +
Preference number: 6 (lower is better)
Translates to: SRTCGSSLLLPI*SLHCISPNSVF
Trigger: AAAAACACTGTTGGGGGAGATGCAGTGTAGGCTCCATATGGGAAGTAACAGGGAACTACCACAGGTTCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473507.1
CDS GCA 72 bp AGATACAAAATTTCGGATTCTATCTTGTCACTCCCTTaGTCAAGAACCTGTGGTAGTTCCCTGTTACTTCCC +
Preference number: 6 (lower is better)
Translates to: RYKISDSILSLP*SRTCGSSLLLP
Trigger: GGGAAGTAACAGGGAACTACCACAGGTTCTTGAGCAAGGGAGTGACAAGATAGAATCCGAAATTTTGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473507.1