RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PSAPL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000178597

Ensembl transcript IDs: ENST00000319098.7

Found 477 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTGCCCAGCGGGCCCAGGCCTGCCCAGCCAATAGGGGCCACTTCTaGGGCATCCAGAATCTCAGGCCCAGTGTGCCTGTGTTCCTGGGG +
Preference number: 1 (lower is better)
Translates to: TAQRAQACPANRGHF*GIQNLRPSVPVFLG
Trigger: CCCCAGGAACACAGGCACACTGGGCCTGAGATTCTGGATGCCTCAGAAGTGGCCCCTATTGGCTGGGCAGGCCTGGGCCCGCTGGGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 90 bp GGCCAACAACTTCGGGCCCCTGTGTTTTGGAGTCTGGTGCAGAGCTaGCTTCCCATGGCCCATCCGGTGGCCAGGCACGACCACCACCCC +
Preference number: 1 (lower is better)
Translates to: GQQLRAPVFWSLVQS*LPMAHPVARHDHHP
Trigger: GGGGTGGTGGTCGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAAACACAGGGGCCCGAAGTTGTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 90 bp CACCTCCTGTGTTCCGGGCTTGGTTCCGGGCACAGGGGATGGAGGTaGCTGAGACCCTGCCACAGGCCTCCACAGCTTTGGTGGCGGATG +
Preference number: 1 (lower is better)
Translates to: HLLCSGLGSGHRGWR*LRPCHRPPQLWWRM
Trigger: CATCCGCCACCAAAGCTGTGGAGGCCTGTGGCAGGGTCTCAGTCACCTCCATCCCCTGTGCCCGGAACCAAGCCCGGAACACAGGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 90 bp AGGCTCAGACAGCTGGAGGGCTGTGTTCACCGTCTTTGCCCTCGCTaGTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGCTTTTCCC +
Preference number: 1 (lower is better)
Translates to: RLRQLEGCVHRLCPR*STSRWPPQTPPAFP
Trigger: GGGAAAAGCCGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACAGCCCTCCAGCTGTCTGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp CCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTaGTTCCGGGCACAGGGGATGGAGGTGACTGAGACCCTGCCACAG +
Preference number: 1 (lower is better)
Translates to: PLPTSTCRAPPVFRA*FRAQGMEVTETLPQ
Trigger: CTGTGGCAGGGTCTCAGTCACCTCCATCCCCTGTGCCCGGAACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp GGGACCACCGGCAACATCTCAGCCTTGGAGATGAGAGGGCAGCCTTaGCTGGGTCAGGGAGCGGGGCACATGAGTGTGTTCCGGTCCAGT +
Preference number: 1 (lower is better)
Translates to: GTTGNISALEMRGQP*LGQGAGHMSVFRSS
Trigger: ACTGGACCGGAACACACTCATGTGCCCCGCTCCCTGACCCAGCCAAGGCTGCCCTCTCATCTCCAAGGCTGAGATGTTGCCGGTGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp GGCCTCCGCCTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTaGCTGAAGGTGCAGGTACTTGCTCGGCTCTGGCAGCCCGGCGGG +
Preference number: 1 (lower is better)
Translates to: GLRLTMASEECPACV*LKVQVLARLWQPGG
Trigger: CCCGCCGGGCTGCCAGAGCCGAGCAAGTACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAGGCGGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 90 bp TCCGCCTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTaGAGGTGCAGGTACTTGCTCGGCTCTGGCAGCCCGGCGGGAGCC +
Preference number: 1 (lower is better)
Translates to: SALRWHLKNAQHVSG*RCRYLLGSGSPAGA
Trigger: GGCTCCCGCCGGGCTGCCAGAGCCGAGCAAGTACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAGGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 90 bp AGAAAACTGAGGCTCAGACAGCTGGAGGGCTGTGTTCACCGTCTTTaGCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCG +
Preference number: 1 (lower is better)
Translates to: RKLRLRQLEGCVHRL*PRCSTSRWPPQTPP
Trigger: CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACAGCCCTCCAGCTGTCTGAGCCTCAGTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 90 bp GATACTGAGGCCAACAACTTCGGGCCCCTGTGTTTTGGAGTCTGGTaGAGAGCTGCCTTCCCATGGCCCATCCGGTGGCCAGGCACGACC +
Preference number: 1 (lower is better)
Translates to: DTEANNFGPLCFGVW*RAAFPWPIRWPGTT
Trigger: GGTCGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAAACACAGGGGCCCGAAGTTGTTGGCCTCAGTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp CCAGCAGAAGGTAAAGGGGCACCTGAGCCCATGGGCAGGCTCTCATaGGACCACCGGCAACATCTCAGCCTTGGAGATGAGAGGGCAGCC +
Preference number: 1 (lower is better)
Translates to: PAEGKGAPEPMGRLS*DHRQHLSLGDERAA
Trigger: GGCTGCCCTCTCATCTCCAAGGCTGAGATGTTGCCGGTGGTCCCATGAGAGCCTGCCCATGGGCTCAGGTGCCCCTTTACCTTCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp GGCCCAGGTCTGCGACGTTTACTTAAGAGCTCGGGTGTGGCCTCTTaGAAAACAGCACCCGCTCACATCCCGTCCATCCAGGCCTGGCGC +
Preference number: 1 (lower is better)
Translates to: GPGLRRLLKSSGVAS*KTAPAHIPSIQAWR
Trigger: GCGCCAGGCCTGGATGGACGGGATGTGAGCGGGTGCTGTTTTCCAAGAGGCCACACCCGAGCTCTTAAGTAAACGTCGCAGACCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp GGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGAGCTCGGGTGTaGCCTCTTGGAAAACAGCACCCGCTCACATCCCGTCCATCCAGG +
Preference number: 1 (lower is better)
Translates to: GAVAQVCDVYLRARV*PLGKQHPLTSRPSR
Trigger: CCTGGATGGACGGGATGTGAGCGGGTGCTGTTTTCCAAGAGGCCACACCCGAGCTCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp GCAGATACTGAGGCCAACAACTTCGGGCCCCTGTGTTTTGGAGTCTaGTGCAGAGCTGCCTTCCCATGGCCCATCCGGTGGCCAGGCACG +
Preference number: 1 (lower is better)
Translates to: ADTEANNFGPLCFGV*CRAAFPWPIRWPGT
Trigger: CGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAAACACAGGGGCCCGAAGTTGTTGGCCTCAGTATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp AGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGGTaGGAACACCTACCGGCAGGCAGACAGAGAGCCTCTGGGGCTGCT +
Preference number: 1 (lower is better)
Translates to: RGGPMAPSCPRECVR*EHLPAGRQRASGAA
Trigger: AGCAGCCCCAGAGGCTCTCTGTCTGCCTGCCGGTAGGTGTTCCCACCTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 90 bp ACGCTTGTGGTTTATACAGCGCTTGCACCGCCAGACTCTCCTGGGTaGCCCGCTGGGCCCCTGAGATGGGTTTTCTGGTCCCAGCAGACT +
Preference number: 1 (lower is better)
Translates to: TLVVYTALAPPDSPG*PAGPLRWVFWSQQT
Trigger: AGTCTGCTGGGACCAGAAAACCCATCTCAGGGGCCCAGCGGGGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 90 bp TGGATGGACTCCTTAAGCCTCAGTCTCAGTGCTGAATGGTGGTGCTaGCGTCAGCACCAGTGGGCCCGTCCCTTGCTCCTCCTGCCTCTC +
Preference number: 1 (lower is better)
Translates to: WMDSLSLSLSAEWWC*RQHQWARPLLLLPL
Trigger: GAGAGGCAGGAGGAGCAAGGGACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGCTTAAGGAGTCCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp AGAAGCTCTGGCCTGAGCGAGACCCAGACTCCCACCCCCGGCTGTTaGCAAGAGGTAATGACCCTACTAGTGATGGGCCCTCGAAGCCTC +
Preference number: 1 (lower is better)
Translates to: RSSGLSETQTPTPGC*QEVMTLLVMGPRSL
Trigger: GAGGCTTCGAGGGCCCATCACTAGTAGGGTCATTACCTCTTGCCAACAGCCGGGGGTGGGAGTCTGGGTCTCGCTCAGGCCAGAGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 90 bp TCTCAGGCCCAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTaGGACGTTTACTTAAGAGCTCGGGTGTGGCCTCTTGGAAAACAG +
Preference number: 1 (lower is better)
Translates to: SQAQCACVPGAVAQV*DVYLRARVWPLGKQ
Trigger: CTGTTTTCCAAGAGGCCACACCCGAGCTCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTGGGCCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 90 bp CCAATAGGGGCCACTTCTGAGGCATCCAGAATCTCAGGCCCAGTGTaGCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTT +
Preference number: 1 (lower is better)
Translates to: PIGATSEASRISGPV*LCSWGGGPGLRRLL
Trigger: AAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTGGGCCTGAGATTCTGGATGCCTCAGAAGTGGCCCCTATTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp AGCCAGATGTCCATCCAGCAGAAGGTAAAGGGGCACCTGAGCCCATaGGCAGGCTCTCATGGGACCACCGGCAACATCTCAGCCTTGGAG +
Preference number: 1 (lower is better)
Translates to: SQMSIQQKVKGHLSP*AGSHGTTGNISALE
Trigger: CTCCAAGGCTGAGATGTTGCCGGTGGTCCCATGAGAGCCTGCCCATGGGCTCAGGTGCCCCTTTACCTTCTGCTGGATGGACATCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp CCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTCCTGGGCTaGTATCTCCTCTCCCACAGCTGGACAGTTACAGCACCCTCCGCT +
Preference number: 1 (lower is better)
Translates to: PKLLGPVGPAALLLG*YLLSHSWTVTAPSA
Trigger: AGCGGAGGGTGCTGTAACTGTCCAGCTGTGGGAGAGGAGATACCAGCCCAGGAGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 90 bp ATTTGGATGGACTCCTTAAGCCTCAGTCTCAGTGCTGAATGGTGGTaGTGCCGTCAGCACCAGTGGGCCCGTCCCTTGCTCCTCCTGCCT +
Preference number: 1 (lower is better)
Translates to: IWMDSLSLSLSAEWW*CRQHQWARPLLLLP
Trigger: AGGCAGGAGGAGCAAGGGACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGCTTAAGGAGTCCATCCAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 90 bp TTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTaGTCTTCTCCTGGGCTGGTATCTCCTCTCCCACAGCTGGACAGT +
Preference number: 1 (lower is better)
Translates to: LLGWVSQTSRPSRAS*SSPGLVSPLPQLDS
Trigger: ACTGTCCAGCTGTGGGAGAGGAGATACCAGCCCAGGAGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 90 bp TTCTGGGACGTCCCAGGCCTCCGCCTTACGATGGCATCTGAAGAATaGCCAGCATGTGTCTGGCTGAAGGTGCAGGTACTTGCTCGGCTC +
Preference number: 1 (lower is better)
Translates to: FWDVPGLRLTMASEE*PACVWLKVQVLARL
Trigger: GAGCCGAGCAAGTACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAGGCGGAGGCCTGGGACGTCCCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp GTCATTTGGATGGACTCCTTAAGCCTCAGTCTCAGTGCTGAATGGTaGTGCTGCCGTCAGCACCAGTGGGCCCGTCCCTTGCTCCTCCTG +
Preference number: 1 (lower is better)
Translates to: VIWMDSLSLSLSAEW*CCRQHQWARPLLLL
Trigger: CAGGAGGAGCAAGGGACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGCTTAAGGAGTCCATCCAAATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp GGAGTCATTTGGATGGACTCCTTAAGCCTCAGTCTCAGTGCTGAATaGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCCCTTGCTCCTC +
Preference number: 1 (lower is better)
Translates to: GVIWMDSLSLSLSAE*WCCRQHQWARPLLL
Trigger: GAGGAGCAAGGGACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGCTTAAGGAGTCCATCCAAATGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 90 bp CTATGGAGTCATTTGGATGGACTCCTTAAGCCTCAGTCTCAGTGCTaGATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCCCTTGCT +
Preference number: 1 (lower is better)
Translates to: LWSHLDGLLKPQSQC*MVVLPSAPVGPSLA
Trigger: AGCAAGGGACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGCTTAAGGAGTCCATCCAAATGACTCCATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 90 bp ATAGGTGTTCTGGGACGTCCCAGGCCTCCGCCTTACGATGGCATCTaGAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTACTTGC +
Preference number: 1 (lower is better)
Translates to: IGVLGRPRPPPYDGI*RMPSMCLAEGAGTC
Trigger: GCAAGTACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAGGCGGAGGCCTGGGACGTCCCAGAACACCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp GCCTCTTGGAAAACAGCACCCGCTCACATCCCGTCCATCCAGGCCTaGCGCACCTCTTACTCAAGAGGAGAATTAATCCATGGGCCTCAG +
Preference number: 1 (lower is better)
Translates to: ASWKTAPAHIPSIQA*RTSYSRGELIHGPQ
Trigger: CTGAGGCCCATGGATTAATTCTCCTCTTGAGTAAGAGGTGCGCCAGGCCTGGATGGACGGGATGTGAGCGGGTGCTGTTTTCCAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 90 bp CTGGTATCTCCTCTCCCACAGCTGGACAGTTACAGCACCCTCCGCTaGAAAGCCTTTTCCAGCCTGAACGCGGCGGCTATGGAGTCATTT +
Preference number: 1 (lower is better)
Translates to: LVSPLPQLDSYSTLR*KAFSSLNAAAMESF
Trigger: AAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTTCAGCGGAGGGTGCTGTAACTGTCCAGCTGTGGGAGAGGAGATACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp TCCCTGAGAATAAAAACACGGCACACGGCATTTGGAGAACGCTTGTaGTTTATACAGCGCTTGCACCGCCAGACTCTCCTGGGTGCCCCG +
Preference number: 1 (lower is better)
Translates to: SLRIKTRHTAFGERL*FIQRLHRQTLLGAP
Trigger: CGGGGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTTCTCCAAATGCCGTGTGCCGTGTTTTTATTCTCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 90 bp AGCTGGACAGTTACAGCACCCTCCGCTGAAAAGCCTTTTCCAGCCTaGACGCGGCGGCTATGGAGTCATTTGGATGGACTCCTTAAGCCT +
Preference number: 1 (lower is better)
Translates to: SWTVTAPSAEKPFPA*TRRLWSHLDGLLKP
Trigger: AGGCTTAAGGAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTTCAGCGGAGGGTGCTGTAACTGTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 90 bp GAGATGCTCCTCTGTGCGGCGCAGTCACCACCTCTGGGAAATCCATaGTCAACATCTGTCTTGATTTCCCATCCTTGCTGGGATGGGTCT +
Preference number: 1 (lower is better)
Translates to: EMLLCAAQSPPLGNP*STSVLISHPCWDGS
Trigger: AGACCCATCCCAGCAAGGATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGCCGCACAGAGGAGCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 90 bp CCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATCCTTaGTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCT +
Preference number: 1 (lower is better)
Translates to: PLGNPCSTSVLISHP*WDGSPKLLGPVGPA
Trigger: AGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGGATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp GGGATCTGCGCCTTCCCTGAGAATAAAAACACGGCACACGGCATTTaGAGAACGCTTGTGGTTTATACAGCGCTTGCACCGCCAGACTCT +
Preference number: 1 (lower is better)
Translates to: GICAFPENKNTAHGI*RTLVVYTALAPPDS
Trigger: AGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTTCTCCAAATGCCGTGTGCCGTGTTTTTATTCTCAGGGAAGGCGCAGATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp CTGAAAAGCCTTTTCCAGCCTGAACGCGGCGGCTATGGAGTCATTTaGATGGACTCCTTAAGCCTCAGTCTCAGTGCTGAATGGTGGTGC +
Preference number: 1 (lower is better)
Translates to: LKSLFQPERGGYGVI*MDSLSLSLSAEWWC
Trigger: GCACCACCATTCAGCACTGAGACTGAGGCTTAAGGAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp CTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATCCTTGCTaGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCT +
Preference number: 1 (lower is better)
Translates to: LGNPCSTSVLISHPC*DGSPKLLGPVGPAA
Trigger: AGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGGATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 90 bp ACCGTTGTTAAGAGAGAGGCTTTCGGGATCAGGAATACTTGGTTTTaGACTTCAGCTCTGCTCCTTCCCAGCCTCCCTCCTCAGAGCTTC +
Preference number: 1 (lower is better)
Translates to: TVVKREAFGIRNTWF*TSALLLPSLPPQSF
Trigger: GAAGCTCTGAGGAGGGAGGCTGGGAAGGAGCAGAGCTGAAGTTCAAAACCAAGTATTCCTGATCCCGAAAGCCTCTCTCTTAACAACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 90 bp AAATCCATGCTCAACATCTGTCTTGATTTCCCATCCTTGCTGGGATaGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCT +
Preference number: 1 (lower is better)
Translates to: KSMLNICLDFPSLLG*VSQTSRPSRASCSS
Trigger: AGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGGATGGGAAATCAAGACAGATGTTGAGCATGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp GCCTCAGTCTCAGTGCTGAATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCACCGCCAGACTCTCCTaGGTGCCCCGCTGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: ASVSVLNGGAAVSTSGPVTARLS*VPRWAP
Trigger: AGGGGCCCAGCGGGGCACCCAGGAGAGTCTGGCGGT...GACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTCAGCGGGCCCAGGCCTaGCCAGCCAATAGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVQRAQA*PANRGH
Trigger: GTGGCCCCTATTGGCTGGGCAGGCCTGGGCCCGCTG...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 90 bp AGCCCATGGGCAGGCTCTCATGGGACCACCGGCAACATCTCAGCCTaGGAGATGAGAGGGCAGCCTTGGCTGGGTCAGGGAGCGGGGCAC +
Preference number: 2 (lower is better)
Translates to: SPWAGSHGTTGNISA*EMRGQPWLGQGAGH
Trigger: GTGCCCCGCTCCCTGACCCAGCCAAGGCTGCCCTCTCATCTCCAAGGCTGAGATGTTGCCGGTGGTCCCATGAGAGCCTGCCCATGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTCCATGGCCCATCCGGTaGCCAGGCACGACCACCACC +
Preference number: 2 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVPWPIR*PGTTTT
Trigger: GGTGGTGGTCGTGCCTGGCCACCGGATGGGCCATGG...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR TCA 90 bp GGGGCAGCATCCATAGGTGTTCTGGGACGTCCCAGGCCTCCGCCTTACGATGGCTTGGTGGCGGATGAGTaGGTGGAGGGGTCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: GAASIGVLGRPRPPPYDGLVADE*VEGSEG
Trigger: GCCCTCTGACCCCTCCACTCACTCATCCGCCACCAA...GCCATCGTAAGGCGGAGGCCTGGGACGTCCCAGAACACCTATGGATGCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp GCCTCAGTCTCAGTGCTGAATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCCAGCTGCAAGGACACTaGAGGGTCATGCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: ASVSVLNGGAAVSTSGPVQLQGH*RVMPRG
Trigger: GCCCCTGGGCATGACCCTGCAGTGTCCTTGCAGCTG...GACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp TGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTATGAGAGGGCAGCCTTaGCTGGGTCAGGGAGCGGGG +
Preference number: 2 (lower is better)
Translates to: CVHRLCPRCSTSRWPPQTMRGQP*LGQGAG
Trigger: CCCCGCTCCCTGACCCAGCCAAGGCTGCCCTCTCAT...AGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp CCTTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTGCCACCTGGCAGGTGTaGCGCTTGCCCTCTCCCGGC +
Preference number: 2 (lower is better)
Translates to: PCWDGSPKLLGPVGPAALATWQV*RLPSPG
Trigger: GCCGGGAGAGGGCAAGCGCCACACCTGCCAGGTGGC...AAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 90 bp TGGGACCACCGGCAACATCTCAGCCTTGGAGATGAGAGGGCAGCCTaGGCTGGGTCAGGGAGCGGGGCACATGAGTGTGTTCCGGTCCAG +
Preference number: 2 (lower is better)
Translates to: WDHRQHLSLGDERAA*AGSGSGAHECVPVQ
Trigger: CTGGACCGGAACACACTCATGTGCCCCGCTCCCTGACCCAGCCAAGGCTGCCCTCTCATCTCCAAGGCTGAGATGTTGCCGGTGGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp GGGCCACTTCTGAGGCATCCAGAATCTCAGGCCCAGTGTGCCTGTGTTCCTGGGGGGCACCTGAGCCCATaGGCAGGCTCTCATGGGACC +
Preference number: 2 (lower is better)
Translates to: GPLLRHPESQAQCACVPGGHLSP*AGSHGT
Trigger: GGTCCCATGAGAGCCTGCCCATGGGCTCAGGTGCCC...CCCAGGAACACAGGCACACTGGGCCTGAGATTCTGGATGCCTCAGAAGTGGCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGAGAGCTGCCTTCCCATaGCCCATCCGGTGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQRAAFP*PIRWPG
Trigger: GCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCT...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR TCA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGCGGCTCCCAGATGTGTaGGCACCTGCTGCGTGCAGA +
Preference number: 2 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQRLPDV*APAACR
Trigger: TCTGCACGCAGCAGGTGCTCACACATCTGGGAGCCG...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp GGGGCAGCATCCATAGGTGTTCTGGGACGTCCCAGGCCTCCGCCTTACGATGGCCAGCAGACTCATGAATaGCGGTCTCGGGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: GAASIGVLGRPRPPPYDGQQTHE*RSRGKG
Trigger: CCCTTTCCCCCGAGACCGGCATTCATGAGTCTGCTG...GCCATCGTAAGGCGGAGGCCTGGGACGTCCCAGAACACCTATGGATGCTGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp TTTGGAGTCTGGTGCAGAGCTGCCTTCCCATGGCCCATCCGGTGGCCAGGCACGCCCACCCCCGGCTGTTaGCAAGAGGTAATGACCCTA +
Preference number: 2 (lower is better)
Translates to: FGVWCRAAFPWPIRWPGTPTPGC*QEVMTL
Trigger: TAGGGTCATTACCTCTTGCCAACAGCCGGGGGTGGG...CGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp GGGGCAGCATCCATAGGTGTTCTGGGACGTCCCAGGCCTCCGCCTTACGATGGCAGAGAGTGTGTCAGGTaGGAACACCTACCGGCAGGC +
Preference number: 2 (lower is better)
Translates to: GAASIGVLGRPRPPPYDGRECVR*EHLPAG
Trigger: GCCTGCCGGTAGGTGTTCCCACCTGACACACTCTCT...GCCATCGTAAGGCGGAGGCCTGGGACGTCCCAGAACACCTATGGATGCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 90 bp GAGAAGCTCTGGCCTGAGCGAGACCCAGACTCCCACCCCCGGCTGTaGGCAAGAGGTAATGACCCTACTAGTGATGGGCCCTCGAAGCCT +
Preference number: 2 (lower is better)
Translates to: EKLWPERDPDSHPRL*ARGNDPTSDGPSKP
Trigger: AGGCTTCGAGGGCCCATCACTAGTAGGGTCATTACCTCTTGCCAACAGCCGGGGGTGGGAGTCTGGGTCTCGCTCAGGCCAGAGCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 90 bp GGGAAGAGGCAGATACTGAGGCCAACAACTTCGGGCCCCTGTGTTTaGGAGTCTGGTGCAGAGCTGCCTTCCCATGGCCCATCCGGTGGC +
Preference number: 2 (lower is better)
Translates to: GKRQILRPTTSGPCV*ESGAELPSHGPSGG
Trigger: GCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAAACACAGGGGCCCGAAGTTGTTGGCCTCAGTATCTGCCTCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTAGATGTGTGAGCACCTaGTGCGTGCAGATGCTGGGC +
Preference number: 2 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVRCVST*CVQMLG
Trigger: GCCCAGCATCTGCACGCAGCAGGTGCTCACACATCT...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp GCCTCAGTCTCAGTGCTGAATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCGCGGTGGCCCAGGTCTaGGACGTTTACTTAAGAGCT +
Preference number: 2 (lower is better)
Translates to: ASVSVLNGGAAVSTSGPVAVAQV*DVYLRA
Trigger: AGCTCTTAAGTAAACGTCGCAGACCTGGGCCACCGC...GACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp GGGGCAGCATCCATAGGTGTTCTGGGACGTCCCAGGCCTCCGCCTTACGATGGCTGTCATACACACCTTTaGCAGCCACCCCCAGGGACT +
Preference number: 2 (lower is better)
Translates to: GAASIGVLGRPRPPPYDGCHTHL*QPPPGT
Trigger: AGTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACA...GCCATCGTAAGGCGGAGGCCTGGGACGTCCCAGAACACCTATGGATGCTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGGCTGGGCCCCTGAGATaGGTTTTCTGGTCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQAGPLR*VFWSQQ
Trigger: CTGCTGGGACCAGAAAACCCATCTCAGGGGCCCAGC...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp GGCCAAACAGCAGGAGCAGAAACCACAGGAGCACTTGAACCCAGATGGAAACCCGGCACCGGGGCGAGGTaGAGGCACCAGGGTAAGGTG +
Preference number: 2 (lower is better)
Translates to: GQTAGAETTGALEPRWKPGTGAR*RHQGKV
Trigger: CACCTTACCCTGGTGCCTCCACCTCGCCCCGGTGCC...GGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTTTCTGCTCCTGCTGTTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp CTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGCTTTTCCAAGACTTTCCTTCTaGTCATTACCAGGGCAGCGG +
Preference number: 2 (lower is better)
Translates to: LCPRCSTSRWPPQTPPAFPRLSF*SLPGQR
Trigger: CCGCTGCCCTGGTAATGAGCAGAAGGAAAGTCTTGG...AAAAGCCGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGACCCGGGACTCATGTGTaGGGCTCCCAGATGTGTGAG +
Preference number: 2 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRPGTHV*GSQMCE
Trigger: CTCACACATCTGGGAGCCGCACACATGAGTCCCGGG...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp AACGCTTGTGGTTTATACAGCGCTTGCACCGCCAGACTCTCCTGGGTGCCCCGCATGGGCAGGCTCTCATaGGACCACCGGCAACATCTC +
Preference number: 2 (lower is better)
Translates to: NACGLYSACTARLSWVPRMGRLS*DHRQHL
Trigger: GAGATGTTGCCGGTGGTCCCATGAGAGCCTGCCCAT...GCGGGGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp CCTTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTTGCTCAGTGGGTCTGTaGGAGCAGCTGGTACCCAGG +
Preference number: 2 (lower is better)
Translates to: PCWDGSPKLLGPVGPAALCSVGL*EQLVPR
Trigger: CCTGGGTACCAGCTGCTCCCACAGACCCACTGAGCA...AAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTAGGGCCCCTATGGGGGTaGGGCAGGGCCGTGCTCATG +
Preference number: 2 (lower is better)
Translates to: LTMASEECPACVWLKVQVGPLWG*GRAVLM
Trigger: CATGAGCACGGCCCTGCCCCACCCCCATAGGGGCCC...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR TCA 90 bp GGGCCACTTCTGAGGCATCCAGAATCTCAGGCCCAGTGTGCCTGTGTTCCTGGGAGCCCTTGGAGAATGTaGCCAAAGCCCCAGACCTCT +
Preference number: 2 (lower is better)
Translates to: GPLLRHPESQAQCACVPGSPWRM*PKPQTS
Trigger: AGAGGTCTGGGGCTTTGGTCACATTCTCCAAGGGCT...CCCAGGAACACAGGCACACTGGGCCTGAGATTCTGGATGCCTCAGAAGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp TTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTATCTCAGGCCCAGTGTaGCTGTGTTCCTGGGGCGGT +
Preference number: 2 (lower is better)
Translates to: LLGWVSQTSRPSRASCSSISGPV*LCSWGG
Trigger: ACCGCCCCAGGAACACAGGCACACTGGGCCTGAGAT...AGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGAAAAGCACCCACCTCATaGGCCTCGCTAGCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRKAPTS*ASLAGS
Trigger: AGAGCCTGCTAGCGAGGCCCATGAGGTGGGTGCTTT...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGACAGGTTGAGAAGCTCTaGCCTGAGCGAGACCCAGAC +
Preference number: 2 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRQVEKL*PERDPD
Trigger: GTCTGGGTCTCGCTCAGGCCAGAGCTTCTCAACCTG...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp TTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTGCTGCGTGCAGATGCTaGGCCAGCTGCAAGGACACT +
Preference number: 2 (lower is better)
Translates to: LLGWVSQTSRPSRASCSSAACRC*ASCKDT
Trigger: AGTGTCCTTGCAGCTGGCCCAGCATCTGCACGCAGC...AGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp AAAAGCCTTTTCCAGCCTGAACGCGGCGGCTATGGAGTCATTTGGATGGACTCCCCCAGGCCCAAGGGGTaGGTAGGGAAGAGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: KSLFQPERGGYGVIWMDSPRPKG*VGKRVW
Trigger: CCACACCCTCTTCCCTACCCACCCCTTGGGCCTGGG...GGAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp GGCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCAGAGAGCCTCTGGGGCTaGTCCTGGAGAGGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: GAVTTSGKSMLNICLDFPESLWG*SWRGWV
Trigger: CACCCACCCTCTCCAGGAGCAGCCCCAGAGGCTCTC...TGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTATGCTCCACATCCCGGTaGCCACCCCAGACTCCTCCG +
Preference number: 2 (lower is better)
Translates to: LTMASEECPACVWLKVQVCSTSR*PPQTPP
Trigger: CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCA...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp AAAAGCCTTTTCCAGCCTGAACGCGGCGGCTATGGAGTCATTTGGATGGACTCCGTAGGGAAGAGGGTGTaGGGACACCCCACCCTGACC +
Preference number: 2 (lower is better)
Translates to: KSLFQPERGGYGVIWMDSVGKRV*GHPTLT
Trigger: GGTCAGGGTGGGGTGTCCCCACACCCTCTTCCCTAC...GGAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp CTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGCTTTTATGTCCAGGGATACGTaGTTGTCATACACACCTTTG +
Preference number: 2 (lower is better)
Translates to: LCPRCSTSRWPPQTPPAFMSRDT*LSYTPL
Trigger: CAAAGGTGTGTATGACAAGCACGTATCCCTGGACAT...AAAAGCCGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp TGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTTTTCCCGGGAGCTTTTaGCTGGCATATTTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: CVHRLCPRCSTSRWPPQTFPGSF*LAYFAL
Trigger: GAGAGCAAAATATGCCAGGCAAAAGCTCCCGGGAAA...AGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp TCTGCTCATTACCAGGGCAGCGGAGGGTCTGGGGTGCAAGGAGAGAGAGGGACCTTTGTGAAATGGGGATaGGGAAAGCACCCACCTCAT +
Preference number: 2 (lower is better)
Translates to: SAHYQGSGGSGVQGERGTFVKWG*GKHPPH
Trigger: ATGAGGTGGGTGCTTTCCCCATCCCCATTTCACAAA...GGTCCCTCTCTCTCCTTGCACCCCAGACCCTCCGCTGCCCTGGTAATGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp CCTTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTACCACCACCCCTTGCTaGCCTTATCTTTTGTGGGAC +
Preference number: 2 (lower is better)
Translates to: PCWDGSPKLLGPVGPAALTTTPC*PYLLWD
Trigger: GTCCCACAAAAGATAAGGCCAGCAAGGGGTGGTGGT...AAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR TCA 90 bp GGCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCAAGGGAGCGGGGCACATaGGTGTGTTCCGGTCCAGTA +
Preference number: 2 (lower is better)
Translates to: GAVTTSGKSMLNICLDFPRERGT*VCSGPV
Trigger: TACTGGACCGGAACACACTCATGTGCCCCGCTCCCT...TGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR TCA 90 bp AACGCTTGTGGTTTATACAGCGCTTGCACCGCCAGACTCTCCTGGGTGCCCCGCTACAGATTAGAAAACTaGGGCTCAGACAGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: NACGLYSACTARLSWVPRYRLEN*GSDSWR
Trigger: CCTCCAGCTGTCTGAGCCTCAGTTTTCTAATCTGTA...GCGGGGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 90 bp CCTTCCCTGAGAATAAAAACACGGCACACGGCATTTGGAGAACGCTaGTGGTTTATACAGCGCTTGCACCGCCAGACTCTCCTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: PSLRIKTRHTAFGER*WFIQRLHRQTLLGA
Trigger: GGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTTCTCCAAATGCCGTGTGCCGTGTTTTTATTCTCAGGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 90 bp GCGGCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTaGATTTCCCATCCTTGCTGGGATGGGTCTCCCAAACTTCTAGGC +
Preference number: 2 (lower is better)
Translates to: AAQSPPLGNPCSTSV*ISHPCWDGSPKLLG
Trigger: GCCTAGAAGTTTGGGAGACCCATCCCAGCAAGGATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR TCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGACTTGTGAGGCAGGTATaGTCATCCCCATTCTACAGA +
Preference number: 2 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRLVRQV*SSPFYR
Trigger: TCTGTAGAATGGGGATGATCATACCTGCCTCACAAG...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp AACGCTTGTGGTTTATACAGCGCTTGCACCGCCAGACTCTCCTGGGTGCCCCGCTTGCCTGGCATATTTTaGTCTCCTGACTTTGAGCAC +
Preference number: 2 (lower is better)
Translates to: NACGLYSACTARLSWVPRLPGIF*SPDFEH
Trigger: GTGCTCAAAGTCAGGAGAGCAAAATATGCCAGGCAA...GCGGGGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTAAGTGCTGAATGGTGGTaGTGCCGTCAGCACCAGTGG +
Preference number: 2 (lower is better)
Translates to: LTMASEECPACVWLKVQVSAEWW*CRQHQW
Trigger: CCACTGGTGCTGACGGCAGCACCACCATTCAGCACT...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 90 bp ACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATCCTaGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: TSGKSMLNICLDFPS*LGWVSQTSRPSRAS
Trigger: GCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGGATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp GGGCCACTTCTGAGGCATCCAGAATCTCAGGCCCAGTGTGCCTGTGTTCCTGGGTTTTCATTTGTGAAATaGGGATGGGGAAAGCACCCA +
Preference number: 2 (lower is better)
Translates to: GPLLRHPESQAQCACVPGFSFVK*GWGKHP
Trigger: TGGGTGCTTTCCCCATCCCCATTTCACAAATGAAAA...CCCAGGAACACAGGCACACTGGGCCTGAGATTCTGGATGCCTCAGAAGTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATCCGTCCATCCAGGCCTaGCGCACCTCTTACTCAAGA +
Preference number: 2 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHPSIQA*RTSYSR
Trigger: TCTTGAGTAAGAGGTGCGCCAGGCCTGGATGGACGG...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp TTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTTTTGGAGAACGCTTGTaGTTTATACAGCGCTTGCAC +
Preference number: 2 (lower is better)
Translates to: LLGWVSQTSRPSRASCSSFGERL*FIQRLH
Trigger: GTGCAAGCGCTGTATAAACCACAAGCGTTCTCCAAA...AGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGAAGGAGAATTAATCCATaGGCCTCAGGTGAAATACCA +
Preference number: 2 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRRRINP*ASGEIP
Trigger: TGGTATTTCACCTGAGGCCCATGGATTAATTCTCCT...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp GGCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCACTGTGTTTTGGAGTCTaGTGCAGAGCTGCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: GAVTTSGKSMLNICLDFPLCFGV*CRAAFP
Trigger: TGGGAAGGCAGCTCTGCACCAGACTCCAAAACACAG...TGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR TCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATAATAGGGGCCACTTCTaGGGCATCCAGAATCTCAGG +
Preference number: 2 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHNRGHF*GIQNLR
Trigger: CCTGAGATTCTGGATGCCTCAGAAGTGGCCCCTATT...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTGGGCAGCGGAGGGTCTaGGGTGCAAGGAGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFGQRRV*GARRER
Trigger: CCTCTCTCTCCTTGCACCCCAGACCCTCCGCTGCCC...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTAACGGCACACGGCATTTaGAGAACGCTTGTGGTTTAT +
Preference number: 2 (lower is better)
Translates to: LTMASEECPACVWLKVQVTAHGI*RTLVVY
Trigger: ATAAACCACAAGCGTTCTCCAAATGCCGTGTGCCGT...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATTTAAGAGCTCGGGTGTaGCCTCTTGGAAAACAGCAC +
Preference number: 2 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHLRARV*PLGKQH
Trigger: GTGCTGTTTTCCAAGAGGCCACACCCGAGCTCTTAA...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR TCA 90 bp AAAAGCCTTTTCCAGCCTGAACGCGGCGGCTATGGAGTCATTTGGATGGACTCCAGGAATACTTGGTTTTaGACTTCAGCTCTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: KSLFQPERGGYGVIWMDSRNTWF*TSALLL
Trigger: AAGGAGCAGAGCTGAAGTTCAAAACCAAGTATTCCT...GGAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTCCTGCTGCGTGCAGATaGTGGGCCAGCTGCAAGGAC +
Preference number: 2 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFPAACR*WASCKD
Trigger: GTCCTTGCAGCTGGCCCAGCATCTGCACGCAGCAGG...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATCTGAGATGGGTTTTCTaGTCCCAGCAGACTCATGAA +
Preference number: 2 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHLRWVF*SQQTHE
Trigger: TTCATGAGTCTGCTGGGACCAGAAAACCCATCTCAG...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR GCA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTCCCAGTAGGGCCAGCTaGTCTTCTCCTGGGCTGGTA +
Preference number: 2 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFPSRAS*SSPGLV
Trigger: TACCAGCCCAGGAGAAGAGCAGCTGGCCCTACTGGG...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTCGGGCCCCTGTGTTTTaGAGTCTGGTGCAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFRAPVF*SLVQSC
Trigger: GCAGCTCTGCACCAGACTCCAAAACACAGGGGCCCG...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTTGCTCCTGGAGAGGGTaGGTGGTCTCAGGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFCSWRG*VVSGEE
Trigger: CTCTTCCCCTGAGACCACCCACCCTCTCCAGGAGCA...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CCA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTCTCCTCTCCCACAGCTaGACAGTTACAGCACCCTCC +
Preference number: 2 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFLLSHS*TVTAPS
Trigger: GGAGGGTGCTGTAACTGTCCAGCTGTGGGAGAGGAG...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp TGCTGCGTGCAGATGCTGGGCCAGCTGCAAGGACACTaGAGGGTCATGCCCAGGGGCTCTCCTGGAGGGGGC +
Preference number: 3 (lower is better)
Translates to: CCVQMLGQLQGH*RVMPRGSPGGG
Trigger: GCCCCCTCCAGGAGAGCCCCTGGGCATGACCCTGCAGTGTCCTTGCAGCTGGCCCAGCATCTGCACGCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp GCCTCAGTCTCAGTGCTGAATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCGATGAGAGGGCAGCCTaGGCTGGGTCAGGGAGCGGG +
Preference number: 3 (lower is better)
Translates to: ASVSVLNGGAAVSTSGPVDERAA*AGSGSG
Trigger: CCCGCTCCCTGACCCAGCCAAGGCTGCCCTCTCATC...GACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 72 bp GACCCTGCCACAGGCCTCCACAGCTTTGGTGGCGGATaGGTGAGTGGAGGGGTCAGAGGGCCCCTATGGGGG +
Preference number: 3 (lower is better)
Translates to: DPATGLHSFGGG*VSGGVRGPLWG
Trigger: CCCCCATAGGGGCCCTCTGACCCCTCCACTCACTCATCCGCCACCAAAGCTGTGGAGGCCTGTGGCAGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp CAGCTGGAGGGCTGTGTTCACCGTCTTTGCCCTCGCTaGTCCACATCCCGGTGGCCACCCCAGACTCCTCCG +
Preference number: 3 (lower is better)
Translates to: QLEGCVHRLCPR*STSRWPPQTPP
Trigger: CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACAGCCCTCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp TGGCCCATCCGGTGGCCAGGCACGACCACCACCCCTTaGTGGCCTTATCTTTTGTGGGACTGCCCAGCGGGC +
Preference number: 3 (lower is better)
Translates to: WPIRWPGTTTTP*WPYLLWDCPAG
Trigger: GCCCGCTGGGCAGTCCCACAAAAGATAAGGCCAGCAAGGGGTGGTGGTCGTGCCTGGCCACCGGATGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp GTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTaGCCACCCCAGACTCCTCCGGCTTTTCCCGGGAGC +
Preference number: 3 (lower is better)
Translates to: VHRLCPRCSTSR*PPQTPPAFPGS
Trigger: GCTCCCGGGAAAAGCCGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp CCCATCCGGTGGCCAGGCACGACCACCACCCCTTGCTaGCCTTATCTTTTGTGGGACTGCCCAGCGGGCCCA +
Preference number: 3 (lower is better)
Translates to: PIRWPGTTTTPC*PYLLWDCPAGP
Trigger: TGGGCCCGCTGGGCAGTCCCACAAAAGATAAGGCCAGCAAGGGGTGGTGGTCGTGCCTGGCCACCGGATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp TGGGGCAGGGCCGTGCTCATGACCTGGGTGTGCAGCTaGGCCTGTGGGGTCATGGCCAGTGAGCTCCGTTCA +
Preference number: 3 (lower is better)
Translates to: WGRAVLMTWVCS*ACGVMASELRS
Trigger: TGAACGGAGCTCACTGGCCATGACCCCACAGGCCCAGCTGCACACCCAGGTCATGAGCACGGCCCTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 72 bp CTCATGGGACCACCGGCAACATCTCAGCCTTGGAGATaGGAGGGCAGCCTTGGCTGGGTCAGGGAGCGGGGC +
Preference number: 3 (lower is better)
Translates to: LMGPPATSQPWR*EGSLGWVRERG
Trigger: GCCCCGCTCCCTGACCCAGCCAAGGCTGCCCTCTCATCTCCAAGGCTGAGATGTTGCCGGTGGTCCCATGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 72 bp CGGGCCCAGGCCTGCCCAGCCAATAGGGGCCACTTCTaGGGCATCCAGAATCTCAGGCCCAGTGTGCCTGTG +
Preference number: 3 (lower is better)
Translates to: RAQACPANRGHF*GIQNLRPSVPV
Trigger: CACAGGCACACTGGGCCTGAGATTCTGGATGCCTCAGAAGTGGCCCCTATTGGCTGGGCAGGCCTGGGCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp AGGCTCAGACAGCTGGAGGGCTGTGTTCACCGTCTTTaGCCTCGCTGCTCCACATCCCGGTGGCCACCCCAG +
Preference number: 3 (lower is better)
Translates to: RLRQLEGCVHRL*PRCSTSRWPPQ
Trigger: CTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACAGCCCTCCAGCTGTCTGAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp CTTCGGGCCCCTGTGTTTTGGAGTCTGGTGCAGAGCTaGCTTCCCATGGCCCATCCGGTGGCCAGGCACGAC +
Preference number: 3 (lower is better)
Translates to: LRAPVFWSLVQS*LPMAHPVARHD
Trigger: GTCGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAAACACAGGGGCCCGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp GTCTGGTGCAGAGCTGCCTTCCCATGGCCCATCCGGTaGCCAGGCACGACCACCACCCCTTGCTGGCCTTAT +
Preference number: 3 (lower is better)
Translates to: VWCRAAFPWPIR*PGTTTTPCWPY
Trigger: ATAAGGCCAGCAAGGGGTGGTGGTCGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp CCTTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTTGGCAGGTGTGGCGCTaGCCCTCTCCCGGCCTCTCC +
Preference number: 3 (lower is better)
Translates to: PCWDGSPKLLGPVGPAALWQVWR*PSPGLS
Trigger: GGAGAGGCCGGGAGAGGGCAAGCGCCACACCTGCCA...AAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp GCCACTTCTGAGGCATCCAGAATCTCAGGCCCAGTGTaGCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGA +
Preference number: 3 (lower is better)
Translates to: ATSEASRISGPV*LCSWGGGPGLR
Trigger: TCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTGGGCCTGAGATTCTGGATGCCTCAGAAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp CTGTGTTTTGGAGTCTGGTGCAGAGCTGCCTTCCCATaGCCCATCCGGTGGCCAGGCACGACCACCACCCCT +
Preference number: 3 (lower is better)
Translates to: LCFGVWCRAAFP*PIRWPGTTTTP
Trigger: AGGGGTGGTGGTCGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAAACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp CAGACAGCTGGAGGGCTGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGTCCCACCCCCGGCTGTaGGCAAGAGGTAATGACCCT +
Preference number: 3 (lower is better)
Translates to: QTAGGLCSPSLPSLLHIPSHPRL*ARGNDP
Trigger: AGGGTCATTACCTCTTGCCAACAGCCGGGGGTGGGA...CGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACAGCCCTCCAGCTGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp TTTGGAGTCTGGTGCAGAGCTGCCTTCCCATGGCCCATCCGGTGGCCAGGCACGTTGTCATACACACCTTaGGCAGCCACCCCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: FGVWCRAAFPWPIRWPGTLSYTP*AATPRD
Trigger: GTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACAA...CGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp TTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTCAGTGGGCCCGTCCCTaGCTCCTCCTGCCTCTCTGC +
Preference number: 3 (lower is better)
Translates to: LLGWVSQTSRPSRASCSSQWARP*LLLPLC
Trigger: GCAGAGAGGCAGGAGGAGCAAGGGACGGGCCCACTG...AGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 72 bp CTGGGTGTGCAGCTGGGCCTGTGGGGTCATGGCCAGTaGGCTCCGTTCATCACGGGCAACCATCTAGTGGAG +
Preference number: 3 (lower is better)
Translates to: LGVQLGLWGHGQ*APFITGNHLVE
Trigger: CTCCACTAGATGGTTGCCCGTGATGAACGGAGCTCACTGGCCATGACCCCACAGGCCCAGCTGCACACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp GTTTATACAGCGCTTGCACCGCCAGACTCTCCTGGGTaGCCCGCTGGGCCCCTGAGATGGGTTTTCTGGTCC +
Preference number: 3 (lower is better)
Translates to: VYTALAPPDSPG*PAGPLRWVFWS
Trigger: GGACCAGAAAACCCATCTCAGGGGCCCAGCGGGGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp CGGCATTTGGAGAACGCTTGTGGTTTATACAGCGCTTaGACCGCCAGACTCTCCTGGGTGCCCCGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: RHLENACGLYSA*TARLSWVPRWA
Trigger: GGCCCAGCGGGGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTTCTCCAAATGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp GGACTCATGTGTGCGGCTCCCAGATGTGTGAGCACCTaGTGCGTGCAGATGCTGGGCCAGCTGCAAGGACAC +
Preference number: 3 (lower is better)
Translates to: GLMCAAPRCVST*CVQMLGQLQGH
Trigger: GTGTCCTTGCAGCTGGCCCAGCATCTGCACGCAGCAGGTGCTCACACATCTGGGAGCCGCACACATGAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp GCCAACAACTTCGGGCCCCTGTGTTTTGGAGTCTGGTaGAGAGCTGCCTTCCCATGGCCCATCCGGTGGCCA +
Preference number: 3 (lower is better)
Translates to: ANNFGPLCFGVW*RAAFPWPIRWP
Trigger: TGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAAACACAGGGGCCCGAAGTTGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp GAGGCCAACAACTTCGGGCCCCTGTGTTTTGGAGTCTaGTGCAGAGCTGCCTTCCCATGGCCCATCCGGTGG +
Preference number: 3 (lower is better)
Translates to: EANNFGPLCFGV*CRAAFPWPIRW
Trigger: CCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAAACACAGGGGCCCGAAGTTGTTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp ACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTaGTTCCGGGCACAGGGGATGGAGGTGACTGAGACC +
Preference number: 3 (lower is better)
Translates to: TSTCRAPPVFRA*FRAQGMEVTET
Trigger: GGTCTCAGTCACCTCCATCCCCTGTGCCCGGAACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp GCCTCAGTCTCAGTGCTGAATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCTGGTTTATACAGCGCTaGCACCGCCAGACTCTCCTG +
Preference number: 3 (lower is better)
Translates to: ASVSVLNGGAAVSTSGPVWFIQR*HRQTLL
Trigger: CAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCA...GACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 72 bp GAGGGCAGCCTTGGCTGGGTCAGGGAGCGGGGCACATaGGTGTGTTCCGGTCCAGTAGAGATGCTTTCAAGG +
Preference number: 3 (lower is better)
Translates to: EGSLGWVRERGT*VCSGPVEMLSR
Trigger: CCTTGAAAGCATCTCTACTGGACCGGAACACACTCATGTGCCCCGCTCCCTGACCCAGCCAAGGCTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 72 bp GGGACTGCTCCGAAGCCCAGCAGCCCTTGGAGAATGTaGCCAAAGCCCCAGACCTCTCCCCGGAAATGTCCA +
Preference number: 3 (lower is better)
Translates to: GTAPKPSSPWRM*PKPQTSPRKCP
Trigger: TGGACATTTCCGGGGAGAGGTCTGGGGCTTTGGTCACATTCTCCAAGGGCTGCTGGGCTTCGGAGCAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 72 bp AGGTGTGGCGCTTGCCCTCTCCCGGCCTCTCCCAGGTaGCCTGTCGGGGGATTTCAGGTCATGTCACACATA +
Preference number: 3 (lower is better)
Translates to: RCGACPLPASPR*PVGGFQVMSHI
Trigger: TATGTGTGACATGACCTGAAATCCCCCGACAGGTCACCTGGGAGAGGCCGGGAGAGGGCAAGCGCCACACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp GGTGAAATACCAGCTTCCACCCCCGGGACTCATGTGTaGGGCTCCCAGATGTGTGAGCACCTGCTGCGTGCA +
Preference number: 3 (lower is better)
Translates to: GEIPASTPGTHV*GSQMCEHLLRA
Trigger: TGCACGCAGCAGGTGCTCACACATCTGGGAGCCGCACACATGAGTCCCGGGGGTGGAAGCTGGTATTTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTaGGACGTTTACTTAAGAGCTCGGGTGTGGCCTCTT +
Preference number: 3 (lower is better)
Translates to: QCACVPGAVAQV*DVYLRARVWPL
Trigger: AAGAGGCCACACCCGAGCTCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp TCCTTAAGCCTCAGTCTCAGTGCTGAATGGTGGTGCTaGCGTCAGCACCAGTGGGCCCGTCCCTTGCTCCTC +
Preference number: 3 (lower is better)
Translates to: SLSLSLSAEWWC*RQHQWARPLLL
Trigger: GAGGAGCAAGGGACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGCTTAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp GACTCCTTAAGCCTCAGTCTCAGTGCTGAATGGTGGTaGTGCCGTCAGCACCAGTGGGCCCGTCCCTTGCTC +
Preference number: 3 (lower is better)
Translates to: DSLSLSLSAEWW*CRQHQWARPLL
Trigger: GAGCAAGGGACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGCTTAAGGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp GGCAACATCTCAGCCTTGGAGATGAGAGGGCAGCCTTaGCTGGGTCAGGGAGCGGGGCACATGAGTGTGTTC +
Preference number: 3 (lower is better)
Translates to: GNISALEMRGQP*LGQGAGHMSVF
Trigger: GAACACACTCATGTGCCCCGCTCCCTGACCCAGCCAAGGCTGCCCTCTCATCTCCAAGGCTGAGATGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp GGTAAAGGGGCACCTGAGCCCATGGGCAGGCTCTCATaGGACCACCGGCAACATCTCAGCCTTGGAGATGAG +
Preference number: 3 (lower is better)
Translates to: GKGAPEPMGRLS*DHRQHLSLGDE
Trigger: CTCATCTCCAAGGCTGAGATGTTGCCGGTGGTCCCATGAGAGCCTGCCCATGGGCTCAGGTGCCCCTTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp TGGATGGACTCCTTAAGCCTCAGTCTCAGTGCTGAATaGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCCC +
Preference number: 3 (lower is better)
Translates to: WMDSLSLSLSAE*WCCRQHQWARP
Trigger: GGGACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGCTTAAGGAGTCCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTCACGACCACCACCCCTaGCTGGCCTTATCTTTTGTG +
Preference number: 3 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVHDHHP*LALSFV
Trigger: CACAAAAGATAAGGCCAGCAAGGGGTGGTGGTCGTG...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp GGGGCAGCATCCATAGGTGTTCTGGGACGTCCCAGGCCTCCGCCTTACGATGGCCTTGATTTCCCATCCTaGCTGGGATGGGTCTCCCAA +
Preference number: 3 (lower is better)
Translates to: GAASIGVLGRPRPPPYDGLDFPS*LGWVSQ
Trigger: TTGGGAGACCCATCCCAGCAAGGATGGGAAATCAAG...GCCATCGTAAGGCGGAGGCCTGGGACGTCCCAGAACACCTATGGATGCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 72 bp CCTCTCCCACAGCTGGACAGTTACAGCACCCTCCGCTaGAAAGCCTTTTCCAGCCTGAACGCGGCGGCTATG +
Preference number: 3 (lower is better)
Translates to: PLPQLDSYSTLR*KAFSSLNAAAM
Trigger: CATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTTCAGCGGAGGGTGCTGTAACTGTCCAGCTGTGGGAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 72 bp CGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTaGAGGTGCAGGTACTTGCTCGGCTCTGGCAGCCCG +
Preference number: 3 (lower is better)
Translates to: RWHLKNAQHVSG*RCRYLLGSGSP
Trigger: CGGGCTGCCAGAGCCGAGCAAGTACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 72 bp CTGGGACGTCCCAGGCCTCCGCCTTACGATGGCATCTaGAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCA +
Preference number: 3 (lower is better)
Translates to: LGRPRPPPYDGI*RMPSMCLAEGA
Trigger: TGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAGGCGGAGGCCTGGGACGTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp TGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTaGTCTTCTCCTGGGCTGGTATCTCCTCTCCCACAG +
Preference number: 3 (lower is better)
Translates to: WVSQTSRPSRAS*SSPGLVSPLPQ
Trigger: CTGTGGGAGAGGAGATACCAGCCCAGGAGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp CTAGGCCCAGTAGGGCCAGCTGCTCTTCTCCTGGGCTaGTATCTCCTCTCCCACAGCTGGACAGTTACAGCA +
Preference number: 3 (lower is better)
Translates to: LGPVGPAALLLG*YLLSHSWTVTA
Trigger: TGCTGTAACTGTCCAGCTGTGGGAGAGGAGATACCAGCCCAGGAGAAGAGCAGCTGGCCCTACTGGGCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGCGGGATCAGGAATACTaGGTTTTGAACTTCAGCTCT +
Preference number: 3 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPRDQEY*VLNFSS
Trigger: AGAGCTGAAGTTCAAAACCAAGTATTCCTGATCCCG...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp TTTGGAGTCTGGTGCAGAGCTGCCTTCCCATGGCCCATCCGGTGGCCAGGCACGTTTGCTCTCCTGACTTaGAGCACACCCCAAGACTTT +
Preference number: 3 (lower is better)
Translates to: FGVWCRAAFPWPIRWPGTFALLT*STPQDF
Trigger: AAAGTCTTGGGGTGTGCTCAAAGTCAGGAGAGCAAA...CGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp GCCCAGGTCTGCGACGTTTACTTAAGAGCTCGGGTGTaGCCTCTTGGAAAACAGCACCCGCTCACATCCCGT +
Preference number: 3 (lower is better)
Translates to: AQVCDVYLRARV*PLGKQHPLTSR
Trigger: ACGGGATGTGAGCGGGTGCTGTTTTCCAAGAGGCCACACCCGAGCTCTTAAGTAAACGTCGCAGACCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTGCATTTGGAGAACGCTaGTGGTTTATACAGCGCTTG +
Preference number: 3 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVAFGER*WFIQRL
Trigger: CAAGCGCTGTATAAACCACAAGCGTTCTCCAAATGC...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp TCTCCTGACTTTGAGCACACCCCAAGACTTTCCTTCTaGTCATTACCAGGGCAGCGGAGGGTCTGGGGTGCA +
Preference number: 3 (lower is better)
Translates to: SPDFEHTPRLSF*SLPGQRRVWGA
Trigger: TGCACCCCAGACCCTCCGCTGCCCTGGTAATGAGCAGAAGGAAAGTCTTGGGGTGTGCTCAAAGTCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp CTGCGACGTTTACTTAAGAGCTCGGGTGTGGCCTCTTaGAAAACAGCACCCGCTCACATCCCGTCCATCCAG +
Preference number: 3 (lower is better)
Translates to: LRRLLKSSGVAS*KTAPAHIPSIQ
Trigger: CTGGATGGACGGGATGTGAGCGGGTGCTGTTTTCCAAGAGGCCACACCCGAGCTCTTAAGTAAACGTCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp AAAAGCCTTTTCCAGCCTGAACGCGGCGGCTATGGAGTCATTTGGATGGACTCCCTGTGTTCACCGTCTTaGCCCTCGCTGCTCCACATC +
Preference number: 3 (lower is better)
Translates to: KSLFQPERGGYGVIWMDSLCSPS*PSLLHI
Trigger: GATGTGGAGCAGCGAGGGCAAAGACGGTGAACACAG...GGAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR TCA 72 bp GTTACAGCACCCTCCGCTGAAAAGCCTTTTCCAGCCTaGACGCGGCGGCTATGGAGTCATTTGGATGGACTC +
Preference number: 3 (lower is better)
Translates to: VTAPSAEKPFPA*TRRLWSHLDGL
Trigger: GAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTTCAGCGGAGGGTGCTGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp GCTCTTCTCCTGGGCTGGTATCTCCTCTCCCACAGCTaGACAGTTACAGCACCCTCCGCTGAAAAGCCTTTT +
Preference number: 3 (lower is better)
Translates to: ALLLGWYLLSHS*TVTAPSAEKPF
Trigger: AAAAGGCTTTTCAGCGGAGGGTGCTGTAACTGTCCAGCTGTGGGAGAGGAGATACCAGCCCAGGAGAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTaGCTGAAGGTGCAGGTACTTGCTCGGCTCTGGCAG +
Preference number: 3 (lower is better)
Translates to: LTMASEECPACV*LKVQVLARLWQ
Trigger: CTGCCAGAGCCGAGCAAGTACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp TTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTCGGCTATGGAGTCATTaGGATGGACTCCTTAAGCCT +
Preference number: 3 (lower is better)
Translates to: LLGWVSQTSRPSRASCSSRLWSH*DGLLKP
Trigger: AGGCTTAAGGAGTCCATCCAAATGACTCCATAGCCG...AGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp TCCGGTCCAGTAGAGATGCTTTCAAGGGCAAAGCTGTaGGGCACCGTTGTTAAGAGAGAGGCTTTCGGGATC +
Preference number: 3 (lower is better)
Translates to: SGPVEMLSRAKL*GTVVKREAFGI
Trigger: GATCCCGAAAGCCTCTCTCTTAACAACGGTGCCGCACAGCTTTGCCCTTGAAAGCATCTCTACTGGACCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp CTCTGTGCGGCGCAGTCACCACCTCTGGGAAATCCATaGTCAACATCTGTCTTGATTTCCCATCCTTGCTGG +
Preference number: 3 (lower is better)
Translates to: LCAAQSPPLGNP*STSVLISHPCW
Trigger: CCAGCAAGGATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGCCGCACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp CTCAACATCTGTCTTGATTTCCCATCCTTGCTGGGATaGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: LNICLDFPSLLG*VSQTSRPSRAS
Trigger: GCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGGATGGGAAATCAAGACAGATGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp AAAACAGCACCCGCTCACATCCCGTCCATCCAGGCCTaGCGCACCTCTTACTCAAGAGGAGAATTAATCCAT +
Preference number: 3 (lower is better)
Translates to: KTAPAHIPSIQA*RTSYSRGELIH
Trigger: ATGGATTAATTCTCCTCTTGAGTAAGAGGTGCGCCAGGCCTGGATGGACGGGATGTGAGCGGGTGCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp CTTTTCCAGCCTGAACGCGGCGGCTATGGAGTCATTTaGATGGACTCCTTAAGCCTCAGTCTCAGTGCTGAA +
Preference number: 3 (lower is better)
Translates to: LFQPERGGYGVI*MDSLSLSLSAE
Trigger: TTCAGCACTGAGACTGAGGCTTAAGGAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp CCTTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTGAACGTCTCTGTGAATaGTCTCAACATTCTTGTGAG +
Preference number: 3 (lower is better)
Translates to: PCWDGSPKLLGPVGPAALERLCE*SQHSCE
Trigger: CTCACAAGAATGTTGAGACAATTCACAGAGACGTTC...AAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATAAACCACAGGAGCACTaGAACCCAGATGGAAACCCC +
Preference number: 3 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHKPQEH*NPDGNP
Trigger: GGGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTTT...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp ATAAAAACACGGCACACGGCATTTGGAGAACGCTTGTaGTTTATACAGCGCTTGCACCGCCAGACTCTCCTG +
Preference number: 3 (lower is better)
Translates to: IKTRHTAFGERL*FIQRLHRQTLL
Trigger: CAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTTCTCCAAATGCCGTGTGCCGTGTTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CCA 72 bp GCCTTCCCTGAGAATAAAAACACGGCACACGGCATTTaGAGAACGCTTGTGGTTTATACAGCGCTTGCACCG +
Preference number: 3 (lower is better)
Translates to: AFPENKNTAHGI*RTLVVYTALAP
Trigger: CGGTGCAAGCGCTGTATAAACCACAAGCGTTCTCCAAATGCCGTGTGCCGTGTTTTTATTCTCAGGGAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp GGCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATTTTCCCGGGAGCTTTaGCCTGGCATATTTTGCTCT +
Preference number: 3 (lower is better)
Translates to: GAVTTSGKSMLNICLDFPFSREL*PGIFCS
Trigger: AGAGCAAAATATGCCAGGCAAAAGCTCCCGGGAAAA...TGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTACAGGAATACTTGGTTTaGAACTTCAGCTCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: LTMASEECPACVWLKVQVQEYLV*NFSSAP
Trigger: AGGAGCAGAGCTGAAGTTCAAAACCAAGTATTCCTG...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR GCA 72 bp AATCCATGCTCAACATCTGTCTTGATTTCCCATCCTTaGTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTA +
Preference number: 3 (lower is better)
Translates to: NPCSTSVLISHP*WDGSPKLLGPV
Trigger: TACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGGATGGGAAATCAAGACAGATGTTGAGCATGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR-3UTR CAA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTTCCAGGGATACGTGCTaGTCATACACACCTTTGGCA +
Preference number: 3 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFSRDTC*SYTPLA
Trigger: TGCCAAAGGTGTGTATGACAAGCACGTATCCCTGGA...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGCTTTTCGCTGTGCACACCTGTaGCGGGGCACTGTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LCPRCSTSRWPPQTPPAFRCAHL*RGTVRG
Trigger: GCCCCGGACAGTGCCCCGGCACAGGTGTGCACAGCG...AAAAGCCGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGTGGCCAGGTGCCTCTaGAGCGGCTCACAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPVARCL*SGSQRL
Trigger: CAGCCTCTGTGAGCCGCTGCAGAGGCACCTGGCCAC...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CTCCGAAGCCCAGCAGCCCTTGGAGAATGTGACCAAAGCCCCAGACCTCTCCCCCAGCGGGCCCAGGCCTaGCCAGCCAATAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LRSPAALGECDQSPRPLPQRAQA*PANRGH
Trigger: GTGGCCCCTATTGGCTGGGCAGGCCTGGGCCCGCTG...GGGGAGAGGTCTGGGGCTTTGGTCACATTCTCCAAGGGCTGCTGGGCTTCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGCCTCCCAGGCAGAGATaGTCCTCTGTGCGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPPPRQR*SSVRRS
Trigger: ACTGCGCCGCACAGAGGAGCATCTCTGCCTGGGAGG...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CTCCGAAGCCCAGCAGCCCTTGGAGAATGTGACCAAAGCCCCAGACCTCTCCCCGGGCCCCTATGGGGGTaGGGCAGGGCCGTGCTCATG +
Preference number: 4 (lower is better)
Translates to: LRSPAALGECDQSPRPLPGPLWG*GRAVLM
Trigger: CATGAGCACGGCCCTGCCCCACCCCCATAGGGGCCC...GGGGAGAGGTCTGGGGCTTTGGTCACATTCTCCAAGGGCTGCTGGGCTTCGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGAGGGAGCGGGGCACATaGGTGTGTTCCGGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPRERGT*VCSGPV
Trigger: TACTGGACCGGAACACACTCATGTGCCCCGCTCCCT...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGTATCTTTTGTGGGACTaGCCAGCGGGCCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPYLLWD*PAGPGL
Trigger: CAGGCCTGGGCCCGCTGGGCAGTCCCACAAAAGATA...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCCTCAGTCTCAGTGCTGAATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCCCCTTTGCACACTCCTaGGGGCCTGAGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ASVSVLNGGAAVSTSGPVPFAHS*GPEVGL
Trigger: CAGCCCCACCTCAGGCCCCCAGGAGTGTGCAAAGGG...GACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp AACGCTTGTGGTTTATACAGCGCTTGCACCGCCAGACTCTCCTGGGTGCCCCGCGGGCCCAGGGCACACTaGTCGGTGCCCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: NACGLYSACTARLSWVPRGPRAH*SVPSSG
Trigger: CCCACTGCTGGGCACCGACCAGTGTGCCCTGGGCCC...GCGGGGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TCTGCTCATTACCAGGGCAGCGGAGGGTCTGGGGTGCAAGGAGAGAGAGGGACCGGCACCGGGGCGAGGTaGAGGCACCAGGGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: SAHYQGSGGSGVQGERGTGTGAR*RHQGKV
Trigger: CACCTTACCCTGGTGCCTCCACCTCGCCCCGGTGCC...GGTCCCTCTCTCTCCTTGCACCCCAGACCCTCCGCTGCCCTGGTAATGAGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGGCCACCTGGCAGGTGTaGCGCTTGCCCTCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQATWQV*RLPSPG
Trigger: GCCGGGAGAGGGCAAGCGCCACACCTGCCAGGTGGC...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GGGGCAGCATCCATAGGTGTTCTGGGACGTCCCAGGCCTCCGCCTTACGATGGCTGCCGTCAGCACCAGTaGGCCCGTCCCTTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GAASIGVLGRPRPPPYDGCRQHQ*ARPLLL
Trigger: GAGGAGCAAGGGACGGGCCCACTGGTGCTGACGGCA...GCCATCGTAAGGCGGAGGCCTGGGACGTCCCAGAACACCTATGGATGCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 72 bp ATGGCCCATCCGGTGGCCAGGCACGACCACCACCCCTaGCTGGCCTTATCTTTTGTGGGACTGCCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: MAHPVARHDHHP*LALSFVGLPSG
Trigger: CCCGCTGGGCAGTCCCACAAAAGATAAGGCCAGCAAGGGGTGGTGGTCGTGCCTGGCCACCGGATGGGCCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp CTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGCTTTTGCTGTCTGCAGATCCTaGCACCACACCGTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LCPRCSTSRWPPQTPPAFAVCRS*HHTVEP
Trigger: GGGCTCCACGGTGTGGTGTCAGGATCTGCAGACAGC...AAAAGCCGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGTCCATGGGCCTCAGGTaGAATACCAGCTTCCACCCC +
Preference number: 4 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPSMGLR*NTSFHP
Trigger: GGGGTGGAAGCTGGTATTTCACCTGAGGCCCATGGA...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp GGGGCAGCATCCATAGGTGTTCTGGGACGTCCCAGGCCTCCGCCTTACGATGGCCACAGGGGATGGAGGTaGCTGAGACCCTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: GAASIGVLGRPRPPPYDGHRGWR*LRPCHR
Trigger: CCTGTGGCAGGGTCTCAGTCACCTCCATCCCCTGTG...GCCATCGTAAGGCGGAGGCCTGGGACGTCCCAGAACACCTATGGATGCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp TTTGGAGTCTGGTGCAGAGCTGCCTTCCCATGGCCCATCCGGTGGCCAGGCACGCAGCTGCAAGGACACTaGAGGGTCATGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: FGVWCRAAFPWPIRWPGTQLQGH*RVMPRG
Trigger: GCCCCTGGGCATGACCCTGCAGTGTCCTTGCAGCTG...CGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GCCTCAGTCTCAGTGCTGAATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCGCTGAATGGTGGTGCTaGCGTCAGCACCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: ASVSVLNGGAAVSTSGPVAEWWC*RQHQWA
Trigger: GGCCCACTGGTGCTGACGGCAGCACCACCATTCAGC...GACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCCTCAGTCTCAGTGCTGAATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCCCGGCTGAAGACTCCTaGCTGGGGAGCCACTCACAG +
Preference number: 4 (lower is better)
Translates to: ASVSVLNGGAAVSTSGPVPAEDS*LGSHSQ
Trigger: CTGTGAGTGGCTCCCCAGCCAGGAGTCTTCAGCCGG...GACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CTCCGAAGCCCAGCAGCCCTTGGAGAATGTGACCAAAGCCCCAGACCTCTCCCCGACCGGACAGCCTCCTaGAGTCGGGAGACCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LRSPAALGECDQSPRPLPDRTAS*SRETCR
Trigger: ACGGCAGGTCTCCCGACTCCAGGAGGCTGTCCGGTC...GGGGAGAGGTCTGGGGCTTTGGTCACATTCTCCAAGGGCTGCTGGGCTTCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TTTGGAGTCTGGTGCAGAGCTGCCTTCCCATGGCCCATCCGGTGGCCAGGCACGCTCCGCGTCCCACTCTaGGGACGGCACGATGGCATA +
Preference number: 4 (lower is better)
Translates to: FGVWCRAAFPWPIRWPGTLRVPL*GRHDGI
Trigger: TATGCCATCGTGCCGTCCCCAGAGTGGGACGCGGAG...CGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCCTCAGTCTCAGTGCTGAATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCCCTGCACCAGAAGCTTaGGCCCAGGGCACACTGGTC +
Preference number: 4 (lower is better)
Translates to: ASVSVLNGGAAVSTSGPVPAPEA*AQGTLV
Trigger: GACCAGTGTGCCCTGGGCCCAAGCTTCTGGTGCAGG...GACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CAGACAGCTGGAGGGCTGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGCAGCGTTGCACAGCTTaGCGGCCTCCTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QTAGGLCSPSLPSLLHIPQRCTA*RPPGSC
Trigger: GCAGGAGCCAGGAGGCCGCCAAGCTGTGCAACGCTG...CGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACAGCCCTCCAGCTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TCTGCTCATTACCAGGGCAGCGGAGGGTCTGGGGTGCAAGGAGAGAGAGGGACCCAGGCTCTGGGTCTCTaGCAGCCACGGTCACGCGTG +
Preference number: 4 (lower is better)
Translates to: SAHYQGSGGSGVQGERGTQALGL*QPRSRV
Trigger: CACGCGTGACCGTGGCTGCCAGAGACCCAGAGCCTG...GGTCCCTCTCTCTCCTTGCACCCCAGACCCTCCGCTGCCCTGGTAATGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTATGAGAGGGCAGCCTTaGCTGGGTCAGGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVMRGQP*LGQGAG
Trigger: CCCCGCTCCCTGACCCAGCCAAGGCTGCCCTCTCAT...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CTCCGAAGCCCAGCAGCCCTTGGAGAATGTGACCAAAGCCCCAGACCTCTCCCCGGGCACCTGAGCCCATaGGCAGGCTCTCATGGGACC +
Preference number: 4 (lower is better)
Translates to: LRSPAALGECDQSPRPLPGHLSP*AGSHGT
Trigger: GGTCCCATGAGAGCCTGCCCATGGGCTCAGGTGCCC...GGGGAGAGGTCTGGGGCTTTGGTCACATTCTCCAAGGGCTGCTGGGCTTCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGTGGCCTTATCTTTTGTaGGACTGCCCAGCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPWPYLL*DCPAGP
Trigger: TGGGCCCGCTGGGCAGTCCCACAAAAGATAAGGCCA...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGCTTTTGCCGTGCTCATGACCTaGGTGTGCAGCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LCPRCSTSRWPPQTPPAFAVLMT*VCSWAC
Trigger: ACAGGCCCAGCTGCACACCCAGGTCATGAGCACGGC...AAAAGCCGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGCTCCTCTCCCACAGCTaGACAGTTACAGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPLLSHS*TVTAPS
Trigger: GGAGGGTGCTGTAACTGTCCAGCTGTGGGAGAGGAG...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GGGCCACTTCTGAGGCATCCAGAATCTCAGGCCCAGTGTGCCTGTGTTCCTGGGGTACTTGCTCGGCTCTaGCAGCCCGGCGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GPLLRHPESQAQCACVPGVLARL*QPGGSP
Trigger: AGGGCTCCCGCCGGGCTGCCAGAGCCGAGCAAGTAC...CCCAGGAACACAGGCACACTGGGCCTGAGATTCTGGATGCCTCAGAAGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp CTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGCTTTTTGTGGGAGGACACCGTaGGCAGCCTCTTGCACCCAT +
Preference number: 4 (lower is better)
Translates to: LCPRCSTSRWPPQTPPAFCGRTP*AASCTH
Trigger: ATGGGTGCAAGAGGCTGCTCACGGTGTCCTCCCACA...AAAAGCCGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGAGCCCTTGGAGAATGTaGCCAAAGCCCCAGACCTCT +
Preference number: 4 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPSPWRM*PKPQTS
Trigger: AGAGGTCTGGGGCTTTGGTCACATTCTCCAAGGGCT...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp TCTGCTCATTACCAGGGCAGCGGAGGGTCTGGGGTGCAAGGAGAGAGAGGGACCCGGCTCCCAGATGTGTaGGCACCTGCTGCGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SAHYQGSGGSGVQGERGTRLPDV*APAACR
Trigger: TCTGCACGCAGCAGGTGCTCACACATCTGGGAGCCG...GGTCCCTCTCTCTCCTTGCACCCCAGACCCTCCGCTGCCCTGGTAATGAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGGGGAGAAGCCTCAGTaGTTGGTCAGCAGGGACAAA +
Preference number: 4 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPGEKPQ*LVSRDK
Trigger: TTTGTCCCTGCTGACCAAGCACTGAGGCTTCTCCCC...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGCAGTGGTCCAGCTTCTaGACCACGTTCATGCACACC +
Preference number: 4 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPQWSSF*TTFMHT
Trigger: GGTGTGCATGAACGTGGTGCAGAAGCTGGACCACTG...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTATAGGCATCATGGACTaGCCGGGCCCGCCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVIGIMD*PGPPPV
Trigger: AACCGGAGGCGGGCCCGGGCAGTCCATGATGCCTAT...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGCGGCCTCCTGGCTCCTaGACCAGAAGCTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQRPPGS*TRSLGP
Trigger: TGGGCCCAAGCTTCTGGTGCAGGAGCCAGGAGGCCG...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCACAGCCCCGCACCTaGCAGCTGTCTGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: CVHRLCPRCSTSRWPPQTPQPRT*QLSADP
Trigger: AGGATCTGCAGACAGCTGCCAGGTGCGGGGCTGTGG...AGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGCGTGTTCCCCAGCGTaGAGGTGCATCTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPACSPA*RCISFH
Trigger: ATGGAAAGAGATGCACCTCCACGCTGGGGAACACGC...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGCTTTTGCTGCGTGCAGATGCTaGGCCAGCTGCAAGGACACT +
Preference number: 4 (lower is better)
Translates to: LCPRCSTSRWPPQTPPAFAACRC*ASCKDT
Trigger: AGTGTCCTTGCAGCTGGCCCAGCATCTGCACGCAGC...AAAAGCCGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CCTTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCCATGGCCCATCCGGTaGCCAGGCACGACCACCACC +
Preference number: 4 (lower is better)
Translates to: PCWDGSPKLLGPVGPAALPWPIR*PGTTTT
Trigger: GGTGGTGGTCGTGCCTGGCCACCGGATGGGCCATGG...AAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TTTGGAGTCTGGTGCAGAGCTGCCTTCCCATGGCCCATCCGGTGGCCAGGCACGTGCTCCTGGAGAGGGTaGGTGGTCTCAGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FGVWCRAAFPWPIRWPGTCSWRG*VVSGEE
Trigger: CTCTTCCCCTGAGACCACCCACCCTCTCCAGGAGCA...CGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TTTGGAGTCTGGTGCAGAGCTGCCTTCCCATGGCCCATCCGGTGGCCAGGCACGTGCTCAGTGGGTCTGTaGGAGCAGCTGGTACCCAGG +
Preference number: 4 (lower is better)
Translates to: FGVWCRAAFPWPIRWPGTCSVGL*EQLVPR
Trigger: CCTGGGTACCAGCTGCTCCCACAGACCCACTGAGCA...CGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGCTTTTGGGCCTGTGGGGTCATaGCCAGTGAGCTCCGTTCAT +
Preference number: 4 (lower is better)
Translates to: LCPRCSTSRWPPQTPPAFGPVGS*PVSSVH
Trigger: ATGAACGGAGCTCACTGGCCATGACCCCACAGGCCC...AAAAGCCGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGCCTCCGCCTTACGATaGCATCTGAAGAATGCCCAG +
Preference number: 4 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPASALR*HLKNAQ
Trigger: CTGGGCATTCTTCAGATGCCATCGTAAGGCGGAGGC...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTCAGCCCCTCTGCATCTaGTGTGGCCGAGAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVQPLCI*CGRESP
Trigger: CGGGCTTTCTCGGCCACACCAGATGCAGAGGGGCTG...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGAGCGGCTCACAGAGGCTaGGCGCTGTGCACACCTGTG +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRAAHRG*ALCTPV
Trigger: CACAGGTGTGCACAGCGCTCAGCCTCTGTGAGCCGC...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGAGGGGATGGAGGTGACTaGGACCCTGCCACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRGDGGD*DPATGL
Trigger: GAGGCCTGTGGCAGGGTCTCAGTCACCTCCATCCCC...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGAGGCCCCCACCTTCTTaGACACAGCCACGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQRPPPS*TQPRGP
Trigger: TGGACCCCGTGGCTGTGTGCAAGAAGGTGGGGGCCT...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GGGGCAGCATCCATAGGTGTTCTGGGACGTCCCAGGCCTCCGCCTTACGATGGCAGATGCTGGGCCAGCTaGAAGGACACTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GAASIGVLGRPRPPPYDGRCWAS*KDTAGS
Trigger: TGACCCTGCAGTGTCCTTGCAGCTGGCCCAGCATCT...GCCATCGTAAGGCGGAGGCCTGGGACGTCCCAGAACACCTATGGATGCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGAAGTGGGCCCGTCCCTTaGTCCTCCTGCCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRSGPVP*SSCLSA
Trigger: GGCAGAGAGGCAGGAGGAGCAAGGGACGGGCCCACT...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CTCCGAAGCCCAGCAGCCCTTGGAGAATGTGACCAAAGCCCCAGACCTCTCCCCGCGGCTGCTATGTCCTaGCATACGTCGCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LRSPAALGECDQSPRPLPAAAMS*HTSQGR
Trigger: TCTGCCCTGCGACGTATGCCAGGACATAGCAGCCGC...GGGGAGAGGTCTGGGGCTTTGGTCACATTCTCCAAGGGCTGCTGGGCTTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CCTTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTGCTCCTTCAGGCGCCTaGCGGGGGTGGAAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: PCWDGSPKLLGPVGPAALAPSGA*RGWKVR
Trigger: CCTTACCTTCCACCCCCGCCAGGCGCCTGAAGGAGC...AAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGCTTTTCTGGGGACGGCACGATaGCATAGGCATCATGGACTG +
Preference number: 4 (lower is better)
Translates to: LCPRCSTSRWPPQTPPAFLGTAR*HRHHGL
Trigger: CAGTCCATGATGCCTATGCCATCGTGCCGTCCCCAG...AAAAGCCGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TTTGGAGTCTGGTGCAGAGCTGCCTTCCCATGGCCCATCCGGTGGCCAGGCACGAGCACGGGCTCGTACTaGGTGACGAAGTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: FGVWCRAAFPWPIRWPGTSTGSY*VTKCLH
Trigger: GTGCAAGCACTTCGTCACCCAGTACGAGCCCGTGCT...CGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGATGCTCCACATCCCGGTaGCCACCCCAGACTCCTCCG +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRCSTSR*PPQTPP
Trigger: CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCA...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CAGACAGCTGGAGGGCTGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGCTGGGCCCCTGAGATaGGTTTTCTGGTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QTAGGLCSPSLPSLLHIPAGPLR*VFWSQQ
Trigger: CTGCTGGGACCAGAAAACCCATCTCAGGGGCCCAGC...CGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACAGCCCTCCAGCTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGAACCTGGGTGTGCAGCTaGGCCTGTGGGGTCATGGCC +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRTWVCS*ACGVMA
Trigger: GGCCATGACCCCACAGGCCCAGCTGCACACCCAGGT...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCCTCAGTCTCAGTGCTGAATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCAGGCCTCCACAGCTTTaGTGGCGGATGAGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: ASVSVLNGGAAVSTSGPVRPPQL*WRMSEW
Trigger: CCACTCACTCATCCGCCACCAAAGCTGTGGAGGCCT...GACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GGGGCAGCATCCATAGGTGTTCTGGGACGTCCCAGGCCTCCGCCTTACGATGGCCTCAGTGCTGAATGGTaGTGCTGCCGTCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: GAASIGVLGRPRPPPYDGLSAEW*CCRQHQ
Trigger: CTGGTGCTGACGGCAGCACCACCATTCAGCACTGAG...GCCATCGTAAGGCGGAGGCCTGGGACGTCCCAGAACACCTATGGATGCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGCTTTTGCTCTTCTCCTGGGCTaGTATCTCCTCTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: LCPRCSTSRWPPQTPPAFALLLG*YLLSHS
Trigger: GCTGTGGGAGAGGAGATACCAGCCCAGGAGAAGAGC...AAAAGCCGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 72 bp TGGCCTGAGCGAGACCCAGACTCCCACCCCCGGCTGTaGGCAAGAGGTAATGACCCTACTAGTGATGGGCCC +
Preference number: 4 (lower is better)
Translates to: WPERDPDSHPRL*ARGNDPTSDGP
Trigger: GGGCCCATCACTAGTAGGGTCATTACCTCTTGCCAACAGCCGGGGGTGGGAGTCTGGGTCTCGCTCAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGAGGGGCCCATTGGCCATaGACGGAGCCACAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRGAHWP*TEPQPQ
Trigger: TTGAGGCTGTGGCTCCGTTCATGGCCAATGGGCCCC...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp TCTGCTCATTACCAGGGCAGCGGAGGGTCTGGGGTGCAAGGAGAGAGAGGGACCGGAAGAGGCAGATACTaGGGCCAACAACTTCGGGCC +
Preference number: 4 (lower is better)
Translates to: SAHYQGSGGSGVQGERGTGRGRY*GQQLRA
Trigger: GGCCCGAAGTTGTTGGCCTCAGTATCTGCCTCTTCC...GGTCCCTCTCTCTCCTTGCACCCCAGACCCTCCGCTGCCCTGGTAATGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp CTCCGAAGCCCAGCAGCCCTTGGAGAATGTGACCAAAGCCCCAGACCTCTCCCCAGCTTTGGTGGCGGATaGGTGAGTGGAGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LRSPAALGECDQSPRPLPSFGGG*VSGGVR
Trigger: TCTGACCCCTCCACTCACTCATCCGCCACCAAAGCT...GGGGAGAGGTCTGGGGCTTTGGTCACATTCTCCAAGGGCTGCTGGGCTTCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTCAGCAGACTCATGAATaGCGGTCTCGGGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVQQTHE*RSRGKG
Trigger: CCCTTTCCCCCGAGACCGGCATTCATGAGTCTGCTG...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CAGACAGCTGGAGGGCTGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGAGATGTGTGAGCACCTaGTGCGTGCAGATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QTAGGLCSPSLPSLLHIPRCVST*CVQMLG
Trigger: GCCCAGCATCTGCACGCAGCAGGTGCTCACACATCT...CGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACAGCCCTCCAGCTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp TGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTAGTGCTGAATGGTGGTaGTGCCGTCAGCACCAGTGG +
Preference number: 4 (lower is better)
Translates to: CVHRLCPRCSTSRWPPQTSAEWW*CRQHQW
Trigger: CCACTGGTGCTGACGGCAGCACCACCATTCAGCACT...AGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTGGAGCATGCTCAGGATaGCCGAACTGTGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: CVHRLCPRCSTSRWPPQTGACSG*PNCGHP
Trigger: TGGATGCCCACAGTTCGGCCATCCTGAGCATGCTCC...AGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCCTCAGTCTCAGTGCTGAATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCAGGGGACCCCGTCCATaGCCACTACTTGAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: ASVSVLNGGAAVSTSGPVRGPRP*PLLESN
Trigger: GTTTGACTCAAGTAGTGGCCATGGACGGGGTCCCCT...GACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp AACGCTTGTGGTTTATACAGCGCTTGCACCGCCAGACTCTCCTGGGTGCCCCGCAGCTTGGCGGCCTCCTaGCTCCTGCACCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: NACGLYSACTARLSWVPRSLAAS*LLHQKL
Trigger: AAGCTTCTGGTGCAGGAGCCAGGAGGCCGCCAAGCT...GCGGGGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp AAAAGCCTTTTCCAGCCTGAACGCGGCGGCTATGGAGTCATTTGGATGGACTCCACCGCCAGACTCTCCTaGGTGCCCCGCTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: KSLFQPERGGYGVIWMDSTARLS*VPRWAP
Trigger: AGGGGCCCAGCGGGGCACCCAGGAGAGTCTGGCGGT...GGAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TCTGCTCATTACCAGGGCAGCGGAGGGTCTGGGGTGCAAGGAGAGAGAGGGACCCCGTCCATCCAGGCCTaGCGCACCTCTTACTCAAGA +
Preference number: 4 (lower is better)
Translates to: SAHYQGSGGSGVQGERGTPSIQA*RTSYSR
Trigger: TCTTGAGTAAGAGGTGCGCCAGGCCTGGATGGACGG...GGTCCCTCTCTCTCCTTGCACCCCAGACCCTCCGCTGCCCTGGTAATGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGACTCTGGGGCTGCTCCTaGAGAGGGTGGGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRLWGCS*RGWVVS
Trigger: TGAGACCACCCACCCTCTCCAGGAGCAGCCCCAGAG...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGGACGCATGTGCTCAGTaGGTCTGTGGGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQDACAQ*VCGSSW
Trigger: CCAGCTGCTCCCACAGACCCACTGAGCACATGCGTC...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 72 bp CGGCAACATCTCAGCCTTGGAGATGAGAGGGCAGCCTaGGCTGGGTCAGGGAGCGGGGCACATGAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: RQHLSLGDERAA*AGSGSGAHECV
Trigger: AACACACTCATGTGCCCCGCTCCCTGACCCAGCCAAGGCTGCCCTCTCATCTCCAAGGCTGAGATGTTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 72 bp ACGGCATTTGGAGAACGCTTGTGGTTTATACAGCGCTaGCACCGCCAGACTCTCCTGGGTGCCCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TAFGERLWFIQR*HRQTLLGAPLG
Trigger: GCCCAGCGGGGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTTCTCCAAATGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp AACGCTTGTGGTTTATACAGCGCTTGCACCGCCAGACTCTCCTGGGTGCCCCGCTCCATGGCCACTACTTaGGTCAAACGGGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: NACGLYSACTARLSWVPRSMATT*VKRAGA
Trigger: GGCACCTGCCCGTTTGACTCAAGTAGTGGCCATGGA...GCGGGGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGACAGGGTTCAGCCCATTaGCAGCGGCGGCTGCTATGT +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRQGSAH*QRRLLC
Trigger: ACATAGCAGCCGCCGCTGGCAATGGGCTGAACCCTG...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGAGTGTTGCACAGCGTTaGACAGCTTGGCGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQSVAQR*TAWRPP
Trigger: AGGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACT...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGTTTCCCGGGAGCTTTTaGCTGGCATATTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPFPGSF*LAYFAL
Trigger: GAGAGCAAAATATGCCAGGCAAAAGCTCCCGGGAAA...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp TTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTCCTGCTGCGTGCAGATaGTGGGCCAGCTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: LLGWVSQTSRPSRASCSSPAACR*WASCKD
Trigger: GTCCTTGCAGCTGGCCCAGCATCTGCACGCAGCAGG...AGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GGCCAAACAGCAGGAGCAGAAACCACAGGAGCACTTGAACCCAGATGGAAACCCGAGAGCCTCTGGGGCTaGTCCTGGAGAGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GQTAGAETTGALEPRWKPESLWG*SWRGWV
Trigger: CACCCACCCTCTCCAGGAGCAGCCCCAGAGGCTCTC...GGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTTTCTGCTCCTGCTGTTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp TTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTGAAGGTGCAGGTACTTaGTCGGCTCTGGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: LLGWVSQTSRPSRASCSSEGAGT*SALAAR
Trigger: CCGGGCTGCCAGAGCCGAGCAAGTACCTGCACCTTC...AGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATGGCCTGAGGTGGGGCTaGCCCTGGTGGCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHGLRWG*PWWPPG
Trigger: TCCTGGGGGCCACCAGGGCCAGCCCCACCTCAGGCC...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGCCTGACACCACACCGTaGAGCCCTTTGCACACTCCT +
Preference number: 4 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQPDTTP*SPLHTP
Trigger: AGGAGTGTGCAAAGGGCTCCACGGTGTGGTGTCAGG...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTTTGGACATGAGCCAGTaGTCCAGCTTCTGCACCACG +
Preference number: 4 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVLDMSQ*SSFCTT
Trigger: CGTGGTGCAGAAGCTGGACCACTGGCTCATGTCCAA...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGACGGGCCCCTGTGTTTTaGAGTCTGGTGCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRRAPVF*SLVQSC
Trigger: GCAGCTCTGCACCAGACTCCAAAACACAGGGGCCCG...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGAGAGAGTGTGTCAGGTaGGAACACCTACCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQRECVR*EHLPAG
Trigger: GCCTGCCGGTAGGTGTTCCCACCTGACACACTCTCT...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp ACGTGCTTGTCATACACACCTTTGGCAGCCACCCCCAGGGACTCCAGGTTGAGATGGCGGATGAGTGAGTaGAGGGGTCAGAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TCLSYTPLAATPRDSRLRWRMSE*RGQRAP
Trigger: AGGGGCCCTCTGACCCCTCCACTCACTCATCCGCCA...TCTCAACCTGGAGTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACAAGCACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp GGCCAAACAGCAGGAGCAGAAACCACAGGAGCACTTGAACCCAGATGGAAACCCTGGGGTCATGGCCAGTaGGCTCCGTTCATCACGGGC +
Preference number: 4 (lower is better)
Translates to: GQTAGAETTGALEPRWKPWGHGQ*APFITG
Trigger: GCCCGTGATGAACGGAGCTCACTGGCCATGACCCCA...GGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTTTCTGCTCCTGCTGTTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGAATTGCCAGCGGCGGCTaGTATGTCCTGGCATACGTC +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRIASGG*YVLAYV
Trigger: GACGTATGCCAGGACATAGCAGCCGCCGCTGGCAAT...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGATGGAGTCGGGAGACCTaGCGTACACAGTCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRWSRET*RTQSWH
Trigger: GTGCCAAGACTGTGTACGGCAGGTCTCCCGACTCCA...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp TCTGCTCATTACCAGGGCAGCGGAGGGTCTGGGGTGCAAGGAGAGAGAGGGACCACGACCACCACCCCTTaGTGGCCTTATCTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: SAHYQGSGGSGVQGERGTTTTTP*WPYLLW
Trigger: CCACAAAAGATAAGGCCAGCAAGGGGTGGTGGTCGT...GGTCCCTCTCTCTCCTTGCACCCCAGACCCTCCGCTGCCCTGGTAATGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp AACGCTTGTGGTTTATACAGCGCTTGCACCGCCAGACTCTCCTGGGTGCCCCGCAGGATGGCCGAACTGTaGGCATCCACCATCCACTTG +
Preference number: 4 (lower is better)
Translates to: NACGLYSACTARLSWVPRRMAEL*ASTIHL
Trigger: CAAGTGGATGGTGGATGCCCACAGTTCGGCCATCCT...GCGGGGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GGGCCACTTCTGAGGCATCCAGAATCTCAGGCCCAGTGTGCCTGTGTTCCTGGGTGTCATACACACCTTTaGCAGCCACCCCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: GPLLRHPESQAQCACVPGCHTHL*QPPPGT
Trigger: AGTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACA...CCCAGGAACACAGGCACACTGGGCCTGAGATTCTGGATGCCTCAGAAGTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp AAAAGCCTTTTCCAGCCTGAACGCGGCGGCTATGGAGTCATTTGGATGGACTCCGTGTGCCTGTGTTCCTaGGGCGGTGGCCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KSLFQPERGGYGVIWMDSVCLCS*GGGPGL
Trigger: CAGACCTGGGCCACCGCCCCAGGAACACAGGCACAC...GGAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGACCTCCACAGCTTTGGTaGCGGATGAGTGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRPPQLW*RMSEWR
Trigger: CCTCCACTCACTCATCCGCCACCAAAGCTGTGGAGG...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TCTGCTCATTACCAGGGCAGCGGAGGGTCTGGGGTGCAAGGAGAGAGAGGGACCCCATCCTTGCTGGGATaGGTCTCCCAAACTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SAHYQGSGGSGVQGERGTPSLLG*VSQTSR
Trigger: CCTAGAAGTTTGGGAGACCCATCCCAGCAAGGATGG...GGTCCCTCTCTCTCCTTGCACCCCAGACCCTCCGCTGCCCTGGTAATGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTTGCCCAGCATGTGTCTaGCTGAAGGTGCAGGTACTT +
Preference number: 4 (lower is better)
Translates to: CVHRLCPRCSTSRWPPQTCPACV*LKVQVL
Trigger: AAGTACCTGCACCTTCAGCCAGACACATGCTGGGCA...AGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GGCCAAACAGCAGGAGCAGAAACCACAGGAGCACTTGAACCCAGATGGAAACCCCCTCTGCATCTGGTGTaGCCGAGAAAGCCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: GQTAGAETTGALEPRWKPPLHLV*PRKPEG
Trigger: CCCCTCGGGCTTTCTCGGCCACACCAGATGCAGAGG...GGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTTTCTGCTCCTGCTGTTTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp AAAAGCCTTTTCCAGCCTGAACGCGGCGGCTATGGAGTCATTTGGATGGACTCCCCACTTGCATCCGGCTaGAGACTCCTGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: KSLFQPERGGYGVIWMDSPLASG*RLLAGE
Trigger: CTCCCCAGCCAGGAGTCTTCAGCCGGATGCAAGTGG...GGAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp CTCCGAAGCCCAGCAGCCCTTGGAGAATGTGACCAAAGCCCCAGACCTCTCCCCGCTCAACATCTGTCTTaGTTTCCCATCCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRSPAALGECDQSPRPLPAQHLS*FPILAG
Trigger: CCCAGCAAGGATGGGAAATCAAGACAGATGTTGAGC...GGGGAGAGGTCTGGGGCTTTGGTCACATTCTCCAAGGGCTGCTGGGCTTCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GGCCAAACAGCAGGAGCAGAAACCACAGGAGCACTTGAACCCAGATGGAAACCCACCCATTGCAGAAGCTaGCCTGGTTCTCCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: GQTAGAETTGALEPRWKPTHCRS*PGSPRP
Trigger: GGGACGCGGAGAACCAGGGCAGCTTCTGCAATGGGT...GGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTTTCTGCTCCTGCTGTTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATGGGCACACTGGTCGGTaGCCAGCAGTGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHGHTGR*PAVGSW
Trigger: CCAGGACCCCACTGCTGGGCACCGACCAGTGTGCCC...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp TGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTATGGCATCTGAAGAATaGCCAGCATGTGTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CVHRLCPRCSTSRWPPQTMASEE*PACVWL
Trigger: CAGCCAGACACATGCTGGGCATTCTTCAGATGCCAT...AGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTCTGAAGACTCCTGGCTaGGGAGCCACTCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: LLGWVSQTSRPSRASCSSLKTPG*GATHRS
Trigger: AGACCTGTGAGTGGCTCCCCAGCCAGGAGTCTTCAG...AGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGGACTCACACTGCTCCTaGATGTTCAAGTCGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQDSHCS*MFKSAK
Trigger: CTTGGCCGACTTGAACATCCAGGAGCAGTGTGAGTC...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp AAAAGCCTTTTCCAGCCTGAACGCGGCGGCTATGGAGTCATTTGGATGGACTCCCTCGCTAGCAGGCTCTaGGTCTCTGGCAGCCACGGT +
Preference number: 4 (lower is better)
Translates to: KSLFQPERGGYGVIWMDSLASRL*VSGSHG
Trigger: ACCGTGGCTGCCAGAGACCCAGAGCCTGCTAGCGAG...GGAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp ACGTGCTTGTCATACACACCTTTGGCAGCCACCCCCAGGGACTCCAGGTTGAGAAAAGCACCCACCTCATaGGCCTCGCTAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TCLSYTPLAATPRDSRLRKAPTS*ASLAGS
Trigger: AGAGCCTGCTAGCGAGGCCCATGAGGTGGGTGCTTT...TCTCAACCTGGAGTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACAAGCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GGGGCAGCATCCATAGGTGTTCTGGGACGTCCCAGGCCTCCGCCTTACGATGGCTTTGTGAAATGGGGATaGGGAAAGCACCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: GAASIGVLGRPRPPPYDGFVKWG*GKHPPH
Trigger: ATGAGGTGGGTGCTTTCCCCATCCCCATTTCACAAA...GCCATCGTAAGGCGGAGGCCTGGGACGTCCCAGAACACCTATGGATGCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTAAGAGCTGCCTTCCCATaGCCCATCCGGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LTMASEECPACVWLKVQVRAAFP*PIRWPG
Trigger: GCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCT...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCGCAGTCACCACCTCTaGGAAATCCATGCTCAACAT +
Preference number: 4 (lower is better)
Translates to: CVHRLCPRCSTSRWPPQTRSHHL*EIHAQH
Trigger: ATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCG...AGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 72 bp CAGATACTGAGGCCAACAACTTCGGGCCCCTGTGTTTaGGAGTCTGGTGCAGAGCTGCCTTCCCATGGCCCA +
Preference number: 4 (lower is better)
Translates to: QILRPTTSGPCV*ESGAELPSHGP
Trigger: TGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAAACACAGGGGCCCGAAGTTGTTGGCCTCAGTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp TTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTCAGAGCTGTTGGACATaGGCCAGTGGTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLGWVSQTSRPSRASCSSQSCWT*ASGPAS
Trigger: AGAAGCTGGACCACTGGCTCATGTCCAACAGCTCTG...AGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp AAAAGCCTTTTCCAGCCTGAACGCGGCGGCTATGGAGTCATTTGGATGGACTCCCGGGCTCGTACTGGGTaGCGAAGTGCTTGCACTGGA +
Preference number: 4 (lower is better)
Translates to: KSLFQPERGGYGVIWMDSRARTG*RSACTG
Trigger: TCCAGTGCAAGCACTTCGTCACCCAGTACGAGCCCG...GGAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp CTCCGAAGCCCAGCAGCCCTTGGAGAATGTGACCAAAGCCCCAGACCTCTCCCCCTTGTGAGGCAGGTATaGTCATCCCCATTCTACAGA +
Preference number: 4 (lower is better)
Translates to: LRSPAALGECDQSPRPLPLVRQV*SSPFYR
Trigger: TCTGTAGAATGGGGATGATCATACCTGCCTCACAAG...GGGGAGAGGTCTGGGGCTTTGGTCACATTCTCCAAGGGCTGCTGGGCTTCGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp ACGTGCTTGTCATACACACCTTTGGCAGCCACCCCCAGGGACTCCAGGTTGAGAAACCACAGGAGCACTTaGACCCAGATGGAAACCCCC +
Preference number: 4 (lower is better)
Translates to: TCLSYTPLAATPRDSRLRNHRST*TQMETP
Trigger: GGGGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTT...TCTCAACCTGGAGTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACAAGCACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTATTGGTGGCGGATGAGTaGGTGGAGGGGTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LTMASEECPACVWLKVQVLVADE*VEGSEG
Trigger: GCCCTCTGACCCCTCCACTCACTCATCCGCCACCAA...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp ACGTGCTTGTCATACACACCTTTGGCAGCCACCCCCAGGGACTCCAGGTTGAGATACAGCACCCTCCGCTaGAAAGCCTTTTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TCLSYTPLAATPRDSRLRYSTLR*KAFSSL
Trigger: CAGGCTGGAAAAGGCTTTTCAGCGGAGGGTGCTGTA...TCTCAACCTGGAGTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACAAGCACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATCTCAGGGTGGCCAGGTaGCTCTGCAGCGGCTCACAG +
Preference number: 4 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHLRVAR*LCSGSQ
Trigger: CTGTGAGCCGCTGCAGAGGCACCTGGCCACCCTGAG...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGACCAAGACTTTCCTTCTaGTCATTACCAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRPRLSF*SLPGQR
Trigger: CCGCTGCCCTGGTAATGAGCAGAAGGAAAGTCTTGG...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp TTTGGAGTCTGGTGCAGAGCTGCCTTCCCATGGCCCATCCGGTGGCCAGGCACGTTGCCTGGCATATTTTaGTCTCCTGACTTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: FGVWCRAAFPWPIRWPGTLPGIF*SPDFEH
Trigger: GTGCTCAAAGTCAGGAGAGCAAAATATGCCAGGCAA...CGTGCCTGGCCACCGGATGGGCCATGGGAAGGCAGCTCTGCACCAGACTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTACGTCTTTGCCCTCGCTaGTCCACATCCCGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LTMASEECPACVWLKVQVRLCPR*STSRWP
Trigger: TGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACG...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp ACGTGCTTGTCATACACACCTTTGGCAGCCACCCCCAGGGACTCCAGGTTGAGAGCGGTGGCCCAGGTCTaGGACGTTTACTTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TCLSYTPLAATPRDSRLRAVAQV*DVYLRA
Trigger: AGCTCTTAAGTAAACGTCGCAGACCTGGGCCACCGC...TCTCAACCTGGAGTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACAAGCACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GGCCAAACAGCAGGAGCAGAAACCACAGGAGCACTTGAACCCAGATGGAAACCCAGAGATGCTCCTCTGTaGGGCGCAGTCACCACCTCT +
Preference number: 4 (lower is better)
Translates to: GQTAGAETTGALEPRWKPRDAPL*GAVTTS
Trigger: AGAGGTGGTGACTGCGCCGCACAGAGGAGCATCTCT...GGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTTTCTGCTCCTGCTGTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GGCCAAACAGCAGGAGCAGAAACCACAGGAGCACTTGAACCCAGATGGAAACCCGGATGTCAGACTCCGTaGCGTCAGGGTTCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: GQTAGAETTGALEPRWKPGCQTP*RQGSAH
Trigger: ATGGGCTGAACCCTGACGCCACGGAGTCTGACATCC...GGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTTTCTGCTCCTGCTGTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp AAAAGCCTTTTCCAGCCTGAACGCGGCGGCTATGGAGTCATTTGGATGGACTCCGTCCTCTTTGGAGAGTaGCCTCAGGGTGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KSLFQPERGGYGVIWMDSVLFGE*PQGGQV
Trigger: CACCTGGCCACCCTGAGGCCACTCTCCAAAGAGGAC...GGAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp ACGTGCTTGTCATACACACCTTTGGCAGCCACCCCCAGGGACTCCAGGTTGAGATTGCTCTCCAAGTTGTaGGAGGACACCGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TCLSYTPLAATPRDSRLRLLSKL*EDTVSS
Trigger: GCTGCTCACGGTGTCCTCCCACAACTTGGAGAGCAA...TCTCAACCTGGAGTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACAAGCACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CCTTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCCAGGATGTCTCGCTTaGTGCTCTTGCTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: PCWDGSPKLLGPVGPAALPGCLA*CSCSPS
Trigger: ACTTGGAGAGCAAGAGCACCAAGCGAGACATCCTGG...AAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CAGACAGCTGGAGGGCTGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGTTCCATACATGCTTCTaGCAGTGTTGCACAGCGTTG +
Preference number: 4 (lower is better)
Translates to: QTAGGLCSPSLPSLLHIPFHTCF*QCCTAL
Trigger: CAACGCTGTGCAACACTGCCAGAAGCATGTATGGAA...CGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACAGCCCTCCAGCTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATGGGCAGCGGAGGGTCTaGGGTGCAAGGAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHGQRRV*GARRER
Trigger: CCTCTCTCTCCTTGCACCCCAGACCCTCCGCTGCCC...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTCTGAGATGGGTTTTCTaGTCCCAGCAGACTCATGAA +
Preference number: 4 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVLRWVF*SQQTHE
Trigger: TTCATGAGTCTGCTGGGACCAGAAAACCCATCTCAG...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp AACGCTTGTGGTTTATACAGCGCTTGCACCGCCAGACTCTCCTGGGTGCCCCGCCAACAACAAAGCAGCTaGACCACCAAGCCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: NACGLYSACTARLSWVPRQQQSS*TTKPFS
Trigger: GGAAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTG...GCGGGGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp ACGTGCTTGTCATACACACCTTTGGCAGCCACCCCCAGGGACTCCAGGTTGAGAAATAGGGGCCACTTCTaGGGCATCCAGAATCTCAGG +
Preference number: 4 (lower is better)
Translates to: TCLSYTPLAATPRDSRLRNRGHF*GIQNLR
Trigger: CCTGAGATTCTGGATGCCTCAGAAGTGGCCCCTATT...TCTCAACCTGGAGTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACAAGCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGAACACCGGCCTTCATCTaGATCTCGCTCTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRTPAFI*ISLCFL
Trigger: AAGGAAACAGAGCGAGATGCAGATGAAGGCCGGTGT...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CTCCGAAGCCCAGCAGCCCTTGGAGAATGTGACCAAAGCCCCAGACCTCTCCCCATGTCCAGGGATACGTaGTTGTCATACACACCTTTG +
Preference number: 4 (lower is better)
Translates to: LRSPAALGECDQSPRPLPMSRDT*LSYTPL
Trigger: CAAAGGTGTGTATGACAAGCACGTATCCCTGGACAT...GGGGAGAGGTCTGGGGCTTTGGTCACATTCTCCAAGGGCTGCTGGGCTTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTACCCGGGACTCATGTGTaGGGCTCCCAGATGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LTMASEECPACVWLKVQVPGTHV*GSQMCE
Trigger: CTCACACATCTGGGAGCCGCACACATGAGTCCCGGG...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTACCCAGTAGGGCCAGCTaGTCTTCTCCTGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LTMASEECPACVWLKVQVPSRAS*SSPGLV
Trigger: TACCAGCCCAGGAGAAGAGCAGCTGGCCCTACTGGG...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GGCCAAACAGCAGGAGCAGAAACCACAGGAGCACTTGAACCCAGATGGAAACCCCAAAGGTGTCCTCTTTaGAGAGTGGCCTCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GQTAGAETTGALEPRWKPQRCPL*RVASGW
Trigger: CCACCCTGAGGCCACTCTCCAAAGAGGACACCTTTG...GGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTTTCTGCTCCTGCTGTTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGATTAAGAGCTCGGGTGTaGCCTCTTGGAAAACAGCAC +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRLRARV*PLGKQH
Trigger: GTGCTGTTTTCCAAGAGGCCACACCCGAGCTCTTAA...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp ACGTGCTTGTCATACACACCTTTGGCAGCCACCCCCAGGGACTCCAGGTTGAGACTGTGTTTTGGAGTCTaGTGCAGAGCTGCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TCLSYTPLAATPRDSRLRLCFGV*CRAAFP
Trigger: TGGGAAGGCAGCTCTGCACCAGACTCCAAAACACAG...TCTCAACCTGGAGTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACAAGCACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp TGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTAGGAATACTTGGTTTTaGACTTCAGCTCTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: CVHRLCPRCSTSRWPPQTRNTWF*TSALLL
Trigger: AAGGAGCAGAGCTGAAGTTCAAAACCAAGTATTCCT...AGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGATACAGATTAGAAAACTaGGGCTCAGACAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRYRLEN*GSDSWR
Trigger: CCTCCAGCTGTCTGAGCCTCAGTTTTCTAATCTGTA...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATGTCCCAGCAGACTCATaGATGCCGGTCTCGGGGGAA +
Preference number: 4 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHVPADS*MPVSGE
Trigger: TTCCCCCGAGACCGGCATTCATGAGTCTGCTGGGAC...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATATCTCAGGCCCAGTGTaGCTGTGTTCCTGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHISGPV*LCSWGG
Trigger: ACCGCCCCAGGAACACAGGCACACTGGGCCTGAGAT...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp TGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCTGGGAAATCCATaGTCAACATCTGTCTTGATT +
Preference number: 4 (lower is better)
Translates to: CVHRLCPRCSTSRWPPQTPLGNP*STSVLI
Trigger: AATCAAGACAGATGTTGAGCATGGATTTCCCAGAGG...AGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTATTGCAGAAGCTGCCCTaGTTCTCCGCGTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: LTMASEECPACVWLKVQVLQKLP*FSASHS
Trigger: AGAGTGGGACGCGGAGAACCAGGGCAGCTTCTGCAA...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTTTTTCATTTGTGAAATaGGGATGGGGAAAGCACCCA +
Preference number: 4 (lower is better)
Translates to: CVHRLCPRCSTSRWPPQTFSFVK*GWGKHP
Trigger: TGGGTGCTTTCCCCATCCCCATTTCACAAATGAAAA...AGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTACCCACCCCCGGCTGTTaGCAAGAGGTAATGACCCTA +
Preference number: 4 (lower is better)
Translates to: LTMASEECPACVWLKVQVPTPGC*QEVMTL
Trigger: TAGGGTCATTACCTCTTGCCAACAGCCGGGGGTGGG...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATAAGCCTTTTCCAGCCTaGACGCGGCGGCTATGGAGT +
Preference number: 4 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHKPFPA*TRRLWS
Trigger: ACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTT...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp GGCCAAACAGCAGGAGCAGAAACCACAGGAGCACTTGAACCCAGATGGAAACCCCCTTACGATGGCATCTaGAGAATGCCCAGCATGTGT +
Preference number: 4 (lower is better)
Translates to: GQTAGAETTGALEPRWKPPYDGI*RMPSMC
Trigger: ACACATGCTGGGCATTCTTCAGATGCCATCGTAAGG...GGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTTTCTGCTCCTGCTGTTTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATACGCGCTCCAGGGCATaGGTGATCATGAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHTRSRA*VIMSSE
Trigger: CTCTGAGCTCATGATCACCCATGCCCTGGAGCGCGT...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATATGGGCAGGCTCTCATaGGACCACCGGCAACATCTC +
Preference number: 4 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHMGRLS*DHRQHL
Trigger: GAGATGTTGCCGGTGGTCCCATGAGAGCCTGCCCAT...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATCAGGTTGAGAAGCTCTaGCCTGAGCGAGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHQVEKL*PERDPD
Trigger: GTCTGGGTCTCGCTCAGGCCAGAGCTTCTCAACCTG...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GGGCCACTTCTGAGGCATCCAGAATCTCAGGCCCAGTGTGCCTGTGTTCCTGGGAGGAGAATTAATCCATaGGCCTCAGGTGAAATACCA +
Preference number: 4 (lower is better)
Translates to: GPLLRHPESQAQCACVPGRRINP*ASGEIP
Trigger: TGGTATTTCACCTGAGGCCCATGGATTAATTCTCCT...CCCAGGAACACAGGCACACTGGGCCTGAGATTCTGGATGCCTCAGAAGTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATTCGGGTGTGGCCTCTTaGAAAACAGCACCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHSGVAS*KTAPAH
Trigger: GTGAGCGGGTGCTGTTTTCCAAGAGGCCACACCCGA...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp AAAAGCCTTTTCCAGCCTGAACGCGGCGGCTATGGAGTCATTTGGATGGACTCCACCACCACCCCTTGCTaGCCTTATCTTTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: KSLFQPERGGYGVIWMDSTTTPC*PYLLWD
Trigger: GTCCCACAAAAGATAAGGCCAGCAAGGGGTGGTGGT...GGAGTCCATCCAAATGACTCCATAGCCGCCGCGTTCAGGCTGGAAAAGGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTAAGTCTCAGTGCTGAATaGTGGTGCTGCCGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LTMASEECPACVWLKVQVSLSAE*WCCRQH
Trigger: GTGCTGACGGCAGCACCACCATTCAGCACTGAGACT...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp TTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTATTTCCCATCCTTGCTaGGATGGGTCTCCCAAACTT +
Preference number: 4 (lower is better)
Translates to: LLGWVSQTSRPSRASCSSISHPC*DGSPKL
Trigger: AAGTTTGGGAGACCCATCCCAGCAAGGATGGGAAAT...AGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GGCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCACATCCACCATCCACTTaGATCCGGCTGAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: GAVTTSGKSMLNICLDFPHPPST*IRLKTP
Trigger: AGGAGTCTTCAGCCGGATGCAAGTGGATGGTGGATG...TGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GGCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCACCCAAGGACTCACACTaGTCCTGGATGTTCAAGTCG +
Preference number: 4 (lower is better)
Translates to: GAVTTSGKSMLNICLDFPPKDSH*SWMFKS
Trigger: CGACTTGAACATCCAGGAGCAGTGTGAGTCCTTGGG...TGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GGCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATGCTTCTGGCAGTGTTaGACAGCGTTGCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: GAVTTSGKSMLNICLDFPCFWQC*TALHSL
Trigger: CAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCA...TGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp ACGTGCTTGTCATACACACCTTTGGCAGCCACCCCCAGGGACTCCAGGTTGAGATTTGGAGAACGCTTGTaGTTTATACAGCGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: TCLSYTPLAATPRDSRLRFGERL*FIQRLH
Trigger: GTGCAAGCGCTGTATAAACCACAAGCGTTCTCCAAA...TCTCAACCTGGAGTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACAAGCACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR TCA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTGGGGACACCCCACCCTaGCCACCCACTGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFGDTPP*PPTAGS
Trigger: GCTACCTGCAGTGGGTGGTCAGGGTGGGGTGTCCCC...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GGCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCAGGATGTCTCGCTTGGTaGTCTTGCTCTCCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: GAVTTSGKSMLNICLDFPGCLAW*SCSPSC
Trigger: ACAACTTGGAGAGCAAGAGCACCAAGCGAGACATCC...TGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATTCCCCAGCGTGGAGGTaGATCTCTTTCCATACATGC +
Preference number: 4 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHSPAWR*ISFHTC
Trigger: GCATGTATGGAAAGAGATGCACCTCCACGCTGGGGA...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATTGTTTTGGAGTCTGGTaGAGAGCTGCCTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHCFGVW*RAAFPW
Trigger: CCATGGGAAGGCAGCTCTGCACCAGACTCCAAAACA...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTACTTGCACACCTTCTCTaGGGTGATTTTGGCCACAAG +
Preference number: 4 (lower is better)
Translates to: LTMASEECPACVWLKVQVLAHLL*GDFGHK
Trigger: CTTGTGGCCAAAATCACCCCAGAGAAGGTGTGCAAG...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTATTGATTTCCCATCCTTaGTGGGATGGGTCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LTMASEECPACVWLKVQVLISHP*WDGSPK
Trigger: TTTGGGAGACCCATCCCAGCAAGGATGGGAAATCAA...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GGCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCAACGGCACACGGCATTTaGAGAACGCTTGTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: GAVTTSGKSMLNICLDFPTAHGI*RTLVVY
Trigger: ATAAACCACAAGCGTTCTCCAAATGCCGTGTGCCGT...TGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 72 bp TCTCGGGGGAAAGGGGCTCCAGAACGTCTCTGTGAATaGTCTCAACATTCTTGTGAGGCAGGTATGATCATC +
Preference number: 4 (lower is better)
Translates to: SRGKGAPERLCE*SQHSCEAGMII
Trigger: GATGATCATACCTGCCTCACAAGAATGTTGAGACAATTCACAGAGACGTTCTGGAGCCCCTTTCCCCCGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 72 bp AGAATAAAAACACGGCACACGGCATTTGGAGAACGCTaGTGGTTTATACAGCGCTTGCACCGCCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: RIKTRHTAFGER*WFIQRLHRQTL
Trigger: GAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTTCTCCAAATGCCGTGTGCCGTGTTTTTATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 72 bp TCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTaGATTTCCCATCCTTGCTGGGATGGGTCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SPPLGNPCSTSV*ISHPCWDGSPK
Trigger: TTTGGGAGACCCATCCCAGCAAGGATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTGGGCACACAGCATGCTaGCCAGGGACTCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFGHTAC*PGTLWL
Trigger: GAGCCAGAGAGTCCCTGGGCAGCATGCTGTGTGCCC...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTGTGTTCCTGGGGCGGTaGCCCAGGTCTGCGACGTTT +
Preference number: 4 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFVFLGR*PRSATF
Trigger: AAACGTCGCAGACCTGGGCCACCGCCCCAGGAACAC...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp GCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATGGCTATGGAGTCATTTaGATGGACTCCTTAAGCCTC +
Preference number: 4 (lower is better)
Translates to: AQSPPLGNPCSTSVLISHGYGVI*MDSLSL
Trigger: GAGGCTTAAGGAGTCCATCCAAATGACTCCATAGCC...ATGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
3UTR CAA 72 bp AAATCCATGCTCAACATCTGTCTTGATTTCCCATCCTaGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: KSMLNICLDFPS*LGWVSQTSRPS
Trigger: ACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGGATGGGAAATCAAGACAGATGTTGAGCATGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTCGGCCAAGGTCAAGTTaGACCGGACAGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFRPRSS*TGQPPG
Trigger: TCCAGGAGGCTGTCCGGTCCAACTTGACCTTGGCCG...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CCA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTGCAGAGACTTCGCGGTaGGTTTGTTCCATACGGCCC +
Preference number: 4 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFAETSR*VCSIRP
Trigger: GGGCCGTATGGAACAAACCCACCGCGAAGTCTCTGC...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTCTCGCTTGGTGCTCTTaGTCTCCAAGTTGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFLAWCS*SPSCGR
Trigger: CCTCCCACAACTTGGAGAGCAAGAGCACCAAGCGAG...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTGGTTTATACAGCGCTTaGACCGCCAGACTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFGLYSA*TARLSW
Trigger: CCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACC...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR GCA 90 bp AACAAACAAAACAAAAACAACAACAACAAAGCAGCTGGACCACCAAGCCCTTTTATCTCTTTCCATACATaGTTCTGGCAGTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: NKQNKNNNNKAAGPPSPFISFHT*FWQCCT
Trigger: TGTGCAACACTGCCAGAAGCATGTATGGAAAGAGAT...AAAAGGGCTTGGTGGTCCAGCTGCTTTGTTGTTGTTGTTTTTGTTTTGTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 90 bp AGAAGCTGCCCTGGTTCTCCGCGTCCCACTCTGGGGACGGCACGATaGCATAGGCATCATGGACTGCCCGGGCCCGCCTCCGGTTGCCAC +
Preference number: 5 (lower is better)
Translates to: RSCPGSPRPTLGTAR*HRHHGLPGPASGCH
Trigger: GTGGCAACCGGAGGCGGGCCCGGGCAGTCCATGATGCCTATGCCATCGTGCCGTCCCCAGAGTGGGACGCGGAGAACCAGGGCAGCTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GCCTCAGTCTCAGTGCTGAATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCTGGCAGGTGTGGCGCTaGCCCTCTCCCGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: ASVSVLNGGAAVSTSGPVWQVWR*PSPGLS
Trigger: GGAGAGGCCGGGAGAGGGCAAGCGCCACACCTGCCA...GACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 90 bp GGCAGTGTTGCACAGCGTTGCACAGCTTGGCGGCCTCCTGGCTCCTaGACCAGAAGCTTGGGCCCAGGGCACACTGGTCGGTGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: GSVAQRCTAWRPPGS*TRSLGPGHTGRCPA
Trigger: TGCTGGGCACCGACCAGTGTGCCCTGGGCCCAAGCTTCTGGTGCAGGAGCCAGGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGCAGTGTTGCACAGCGTaGCACAGCTTGGCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPQCCTA*HSLAAS
Trigger: GGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACTG...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GGGGCAGCATCCATAGGTGTTCTGGGACGTCCCAGGCCTCCGCCTTACGATGGCCAGTGGGCCCGTCCCTaGCTCCTCCTGCCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: GAASIGVLGRPRPPPYDGQWARP*LLLPLC
Trigger: GCAGAGAGGCAGGAGGAGCAAGGGACGGGCCCACTG...GCCATCGTAAGGCGGAGGCCTGGGACGTCCCAGAACACCTATGGATGCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 90 bp GTCAGACTCCGTGGCGTCAGGGTTCAGCCCATTGCCAGCGGCGGCTaGTATGTCCTGGCATACGTCGCAGGGCAGAGACTTCGCGGTGGG +
Preference number: 5 (lower is better)
Translates to: VRLRGVRVQPIASGG*YVLAYVAGQRLRGG
Trigger: CCCACCGCGAAGTCTCTGCCCTGCGACGTATGCCAGGACATAGCAGCCGCCGCTGGCAATGGGCTGAACCCTGACGCCACGGAGTCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 90 bp AAGGTGTCCTCTTTGGAGAGTGGCCTCAGGGTGGCCAGGTGCCTCTaGAGCGGCTCACAGAGGCTGAGCGCTGTGCACACCTGTGCCGGG +
Preference number: 5 (lower is better)
Translates to: KVSSLESGLRVARCL*SGSQRLSAVHTCAG
Trigger: CCCGGCACAGGTGTGCACAGCGCTCAGCCTCTGTGAGCCGCTGCAGAGGCACCTGGCCACCCTGAGGCCACTCTCCAAAGAGGACACCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 90 bp CGCGTCCCACTCTGGGGACGGCACGATGGCATAGGCATCATGGACTaGCCGGGCCCGCCTCCGGTTGCCACACAGACGGATGAACTTGCA +
Preference number: 5 (lower is better)
Translates to: RVPLWGRHDGIGIMD*PGPPPVATQTDELA
Trigger: TGCAAGTTCATCCGTCTGTGTGGCAACCGGAGGCGGGCCCGGGCAGTCCATGATGCCTATGCCATCGTGCCGTCCCCAGAGTGGGACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GGGGCAGCATCCATAGGTGTTCTGGGACGTCCCAGGCCTCCGCCTTACGATGGCGTTCCATACGGCCCCTaGGCAGTACCCCACAGCCCC +
Preference number: 5 (lower is better)
Translates to: GAASIGVLGRPRPPPYDGVPYGP*AVPHSP
Trigger: GGGGCTGTGGGGTACTGCCAAGGGGCCGTATGGAAC...GCCATCGTAAGGCGGAGGCCTGGGACGTCCCAGAACACCTATGGATGCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGACTTCGCGGTGGGTTaGTTCCATACGGCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPDFAVG*FHTAPW
Trigger: CCAAGGGGCCGTATGGAACAAACCCACCGCGAAGTC...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp TGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTGATGAGAGGGCAGCCTaGGCTGGGTCAGGGAGCGGG +
Preference number: 5 (lower is better)
Translates to: CVHRLCPRCSTSRWPPQTDERAA*AGSGSG
Trigger: CCCGCTCCCTGACCCAGCCAAGGCTGCCCTCTCATC...AGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 90 bp GAGACCTGCCGTACACAGTCTTGGCACAGAGCTCCTTCAGGCGCCTaGCGGGGGTGGAAGGTAAGGGGCCCATTGGCCATGAACGGAGCC +
Preference number: 5 (lower is better)
Translates to: ETCRTQSWHRAPSGA*RGWKVRGPLAMNGA
Trigger: GGCTCCGTTCATGGCCAATGGGCCCCTTACCTTCCACCCCCGCCAGGCGCCTGAAGGAGCTCTGTGCCAAGACTGTGTACGGCAGGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 90 bp CCAAAGCCAGGATGTCAGACTCCGTGGCGTCAGGGTTCAGCCCATTaGCAGCGGCGGCTGCTATGTCCTGGCATACGTCGCAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PKPGCQTPWRQGSAH*QRRLLCPGIRRRAE
Trigger: CTCTGCCCTGCGACGTATGCCAGGACATAGCAGCCGCCGCTGGCAATGGGCTGAACCCTGACGCCACGGAGTCTGACATCCTGGCTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 90 bp CGTACACAGTCTTGGCACAGAGCTCCTTCAGGCGCCTGGCGGGGGTaGAAGGTAAGGGGCCCATTGGCCATGAACGGAGCCACAGCCTCA +
Preference number: 5 (lower is better)
Translates to: RTQSWHRAPSGAWRG*KVRGPLAMNGATAS
Trigger: TGAGGCTGTGGCTCCGTTCATGGCCAATGGGCCCCTTACCTTCCACCCCCGCCAGGCGCCTGAAGGAGCTCTGTGCCAAGACTGTGTACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp TGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTTCGGCCAAGGTCAAGTaGGACCGGACAGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: CVHRLCPRCSTSRWPPQTSAKVK*DRTASW
Trigger: CCAGGAGGCTGTCCGGTCCAACTTGACCTTGGCCGA...AGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GGGCCACTTCTGAGGCATCCAGAATCTCAGGCCCAGTGTGCCTGTGTTCCTGGGACAGCGTTGCACAGCTaGGCGGCCTCCTGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: GPLLRHPESQAQCACVPGTALHS*AASWLL
Trigger: CAGGAGCCAGGAGGCCGCCAAGCTGTGCAACGCTGT...CCCAGGAACACAGGCACACTGGGCCTGAGATTCTGGATGCCTCAGAAGTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 90 bp GTGGCGTCAGGGTTCAGCCCATTGCCAGCGGCGGCTGCTATGTCCTaGCATACGTCGCAGGGCAGAGACTTCGCGGTGGGTTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: VASGFSPLPAAAAMS*HTSQGRDFAVGLFH
Trigger: ATGGAACAAACCCACCGCGAAGTCTCTGCCCTGCGACGTATGCCAGGACATAGCAGCCGCCGCTGGCAATGGGCTGAACCCTGACGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGTCAGGGTTCAGCCCATaGCCAGCGGCGGCTGCTATG +
Preference number: 5 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQSGFSP*PAAAAM
Trigger: CATAGCAGCCGCCGCTGGCAATGGGCTGAACCCTGA...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp ACGTGCTTGTCATACACACCTTTGGCAGCCACCCCCAGGGACTCCAGGTTGAGACGGGCCCGCCTCCGGTaGCCACACAGACGGATGAAC +
Preference number: 5 (lower is better)
Translates to: TCLSYTPLAATPRDSRLRRARLR*PHRRMN
Trigger: GTTCATCCGTCTGTGTGGCAACCGGAGGCGGGCCCG...TCTCAACCTGGAGTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACAAGCACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTTCCCACCCCCGGCTGTaGGCAAGAGGTAATGACCCT +
Preference number: 5 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVSHPRL*ARGNDP
Trigger: AGGGTCATTACCTCTTGCCAACAGCCGGGGGTGGGA...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTTGCTGGCCTTATCTTTaGTGGGACTGCCCAGCGGGC +
Preference number: 5 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVCWPYL*WDCPAG
Trigger: GCCCGCTGGGCAGTCCCACAAAAGATAAGGCCAGCA...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTTCGGGCCCCTGTGTTTaGGAGTCTGGTGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVSGPCV*ESGAEL
Trigger: CAGCTCTGCACCAGACTCCAAAACACAGGGGCCCGA...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 90 bp GGAGCATGCTCAGGATGGCCGAACTGTGGGCATCCACCATCCACTTaGATCCGGCTGAAGACTCCTGGCTGGGGAGCCACTCACAGGTCT +
Preference number: 5 (lower is better)
Translates to: GACSGWPNCGHPPST*IRLKTPGWGATHRS
Trigger: AGACCTGTGAGTGGCTCCCCAGCCAGGAGTCTTCAGCCGGATGCAAGTGGATGGTGGATGCCCACAGTTCGGCCATCCTGAGCATGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTGTCCATGGCCACTACTaGAGTCAAACGGGCAGGTGC +
Preference number: 5 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVVHGHY*SQTGRC
Trigger: GCACCTGCCCGTTTGACTCAAGTAGTGGCCATGGAC...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 90 bp CCAGCGTGGAGGTGCATCTCTTTCCATACATGCTTCTGGCAGTGTTaGACAGCGTTGCACAGCTTGGCGGCCTCCTGGCTCCTGCACCAG +
Preference number: 5 (lower is better)
Translates to: PAWRCISFHTCFWQC*TALHSLAASWLLHQ
Trigger: CTGGTGCAGGAGCCAGGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCATGTATGGAAAGAGATGCACCTCCACGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 90 bp GGTCACGCGTGTTCCCCAGCGTGGAGGTGCATCTCTTTCCATACATaGTTCTGGCAGTGTTGCACAGCGTTGCACAGCTTGGCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GHACSPAWRCISFHT*FWQCCTALHSLAAS
Trigger: GGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCATGTATGGAAAGAGATGCACCTCCACGCTGGGGAACACGCGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp TCTGCTCATTACCAGGGCAGCGGAGGGTCTGGGGTGCAAGGAGAGAGAGGGACCTCAAAGGTGTCCTCTTaGGAGAGTGGCCTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SAHYQGSGGSGVQGERGTSKVSS*ESGLRV
Trigger: CACCCTGAGGCCACTCTCCAAAGAGGACACCTTTGA...GGTCCCTCTCTCTCCTTGCACCCCAGACCCTCCGCTGCCCTGGTAATGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GCAGCCACTCCCCACGAGCACTTGCAGAGCACCTCCTGTGTTCCGGGCTTGGTTATGAGCTCAGAGCTGTaGGACATGAGCCAGTGGTCC +
Preference number: 5 (lower is better)
Translates to: AATPHEHLQSTSCVPGLVMSSEL*DMSQWS
Trigger: GGACCACTGGCTCATGTCCAACAGCTCTGAGCTCAT...AACCAAGCCCGGAACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CAGACAGCTGGAGGGCTGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGCACAGACGGATGAACTaGCACACCTTCTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: QTAGGLCSPSLPSLLHIPHRRMN*HTFSGV
Trigger: CACCCCAGAGAAGGTGTGCAAGTTCATCCGTCTGTG...CGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACAGCCCTCCAGCTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGACCGTGAGCAGCCTCTaGCACCCATTGCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQTVSSL*HPLQKL
Trigger: CAGCTTCTGCAATGGGTGCAAGAGGCTGCTCACGGT...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp ACGTGCTTGTCATACACACCTTTGGCAGCCACCCCCAGGGACTCCAGGTTGAGATCCTGCACCAGAAGCTaGGGCCCAGGGCACACTGGT +
Preference number: 5 (lower is better)
Translates to: TCLSYTPLAATPRDSRLRSCTRS*GPGHTG
Trigger: ACCAGTGTGCCCTGGGCCCAAGCTTCTGGTGCAGGA...TCTCAACCTGGAGTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACAAGCACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGTTTGCTCTCCTGACTTaGAGCACACCCCAAGACTTT +
Preference number: 5 (lower is better)
Translates to: HRLCPRCSTSRWPPQTPPFALLT*STPQDF
Trigger: AAAGTCTTGGGGTGTGCTCAAAGTCAGGAGAGCAAA...CGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp TGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCACGACCACCACCCCTaGCTGGCCTTATCTTTTGTG +
Preference number: 5 (lower is better)
Translates to: CVHRLCPRCSTSRWPPQTHDHHP*LALSFV
Trigger: CACAAAAGATAAGGCCAGCAAGGGGTGGTGGTCGTG...AGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS TCA 90 bp CAGGATGGCCGAACTGTGGGCATCCACCATCCACTTGCATCCGGCTaGAGACTCCTGGCTGGGGAGCCACTCACAGGTCTTCATCACCAA +
Preference number: 5 (lower is better)
Translates to: QDGRTVGIHHPLASG*RLLAGEPLTGLHHQ
Trigger: TTGGTGATGAAGACCTGTGAGTGGCTCCCCAGCCAGGAGTCTTCAGCCGGATGCAAGTGGATGGTGGATGCCCACAGTTCGGCCATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 90 bp GGTGCATCTCTTTCCATACATGCTTCTGGCAGTGTTGCACAGCGTTaGACAGCTTGGCGGCCTCCTGGCTCCTGCACCAGAAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GASLSIHASGSVAQR*TAWRPPGSCTRSLG
Trigger: GCCCAAGCTTCTGGTGCAGGAGCCAGGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCATGTATGGAAAGAGATGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 90 bp TGGGTCTCTGGCAGCCACGGTCACGCGTGTTCCCCAGCGTGGAGGTaGATCTCTTTCCATACATGCTTCTGGCAGTGTTGCACAGCGTTG +
Preference number: 5 (lower is better)
Translates to: WVSGSHGHACSPAWR*ISFHTCFWQCCTAL
Trigger: CAACGCTGTGCAACACTGCCAGAAGCATGTATGGAAAGAGATGCACCTCCACGCTGGGGAACACGCGTGACCGTGGCTGCCAGAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 90 bp TGGATGTTCAAGTCGGCCAAGGTCAAGTTGGACCGGACAGCCTCCTaGAGTCGGGAGACCTGCCGTACACAGTCTTGGCACAGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: WMFKSAKVKLDRTAS*SRETCRTQSWHRAP
Trigger: AGGAGCTCTGTGCCAAGACTGTGTACGGCAGGTCTCCCGACTCCAGGAGGCTGTCCGGTCCAACTTGACCTTGGCCGACTTGAACATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CCTTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTAAGGTAAGGGGCCCATaGGCCATGAACGGAGCCACA +
Preference number: 5 (lower is better)
Translates to: PCWDGSPKLLGPVGPAALKVRGP*AMNGAT
Trigger: TGTGGCTCCGTTCATGGCCAATGGGCCCCTTACCTT...AAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CCTTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTGCCGTACACAGTCTaGGCACAGAGCTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PCWDGSPKLLGPVGPAALLPYTV*AQSSFR
Trigger: CCTGAAGGAGCTCTGTGCCAAGACTGTGTACGGCAG...AAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp TTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTTCTCGCTCTGTTTCCTaGGCAACCCCAGCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: LLGWVSQTSRPSRASCSSSRSVS*ATPAPG
Trigger: CCCTGGAGCTGGGGTTGCCAAGGAAACAGAGCGAGA...AGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTACAGGCCCCCACCTTCTaGCACACAGCCACGGGGTCC +
Preference number: 5 (lower is better)
Translates to: LTMASEECPACVWLKVQVQAPTF*HTATGS
Trigger: GGACCCCGTGGCTGTGTGCAAGAAGGTGGGGGCCTG...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CCTTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTTTGTCATACACACCTTaGGCAGCCACCCCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: PCWDGSPKLLGPVGPAALLSYTP*AATPRD
Trigger: GTCCCTGGGGGTGGCTGCCAAAGGTGTGTATGACAA...AAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CTTTGCCCTCGCTGCTCCACATCCCGGTGGCCACCCCAGACTCCTCCGGCTTTTTCCAGGGATACGTGCTaGTCATACACACCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: LCPRCSTSRWPPQTPPAFSRDTC*SYTPLA
Trigger: TGCCAAAGGTGTGTATGACAAGCACGTATCCCTGGA...AAAAGCCGGAGGAGTCTGGGGTGGCCACCGGGATGTGGAGCAGCGAGGGCAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CCTTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTGTGTTCACCGTCTTaGCCCTCGCTGCTCCACATC +
Preference number: 5 (lower is better)
Translates to: PCWDGSPKLLGPVGPAALLCSPS*PSLLHI
Trigger: GATGTGGAGCAGCGAGGGCAAAGACGGTGAACACAG...AAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GCCTCAGTCTCAGTGCTGAATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCCGGCTATGGAGTCATTaGGATGGACTCCTTAAGCCT +
Preference number: 5 (lower is better)
Translates to: ASVSVLNGGAAVSTSGPVRLWSH*DGLLKP
Trigger: AGGCTTAAGGAGTCCATCCAAATGACTCCATAGCCG...GACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GGGCCACTTCTGAGGCATCCAGAATCTCAGGCCCAGTGTGCCTGTGTTCCTGGGTTCTCTGGGGTGATTTaGGCCACAAGCTGCACCAAG +
Preference number: 5 (lower is better)
Translates to: GPLLRHPESQAQCACVPGFSGVI*ATSCTK
Trigger: CTTGGTGCAGCTTGTGGCCAAAATCACCCCAGAGAA...CCCAGGAACACAGGCACACTGGGCCTGAGATTCTGGATGCCTCAGAAGTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGATGCTTCTGGCAGTGTaGCACAGCGTTGCACAGCTT +
Preference number: 5 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQMLLAV*HSVAQL
Trigger: AAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCAT...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGCTTGATTTCCCATCCTaGCTGGGATGGGTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQLDFPS*LGWVSQ
Trigger: TTGGGAGACCCATCCCAGCAAGGATGGGAAATCAAG...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GGCCAAACAGCAGGAGCAGAAACCACAGGAGCACTTGAACCCAGATGGAAACCCCTCTTGCTCTCCAAGTaGTGGGAGGACACCGTGAGC +
Preference number: 5 (lower is better)
Translates to: GQTAGAETTGALEPRWKPLLLSK*WEDTVS
Trigger: GCTCACGGTGTCCTCCCACAACTTGGAGAGCAAGAG...GGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTTTCTGCTCCTGCTGTTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GGCCAAACAGCAGGAGCAGAAACCACAGGAGCACTTGAACCCAGATGGAAACCCATGCTGCAGCCACCCTaGAAGGCCACCAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: GQTAGAETTGALEPRWKPMLQPP*KATRMS
Trigger: AGACATCCTGGTGGCCTTCAAGGGTGGCTGCAGCAT...GGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTTTCTGCTCCTGCTGTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CAGTGTGCCTGTGTTCCTGGGGCGGTGGCCCAGGTCTGCGACGTTTACTTAAGAGGGTCCATCATGTCCTaGAGACTCTCAATGAGCACG +
Preference number: 5 (lower is better)
Translates to: QCACVPGAVAQVCDVYLRGSIMS*RLSMST
Trigger: CGTGCTCATTGAGAGTCTCAAGGACATGATGGACCC...TCTTAAGTAAACGTCGCAGACCTGGGCCACCGCCCCAGGAACACAGGCACACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GCCTCAGTCTCAGTGCTGAATGGTGGTGCTGCCGTCAGCACCAGTGGGCCCGTCCGGGATCAGGAATACTaGGTTTTGAACTTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: ASVSVLNGGAAVSTSGPVRDQEY*VLNFSS
Trigger: AGAGCTGAAGTTCAAAACCAAGTATTCCTGATCCCG...GACGGGCCCACTGGTGCTGACGGCAGCACCACCATTCAGCACTGAGACTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp TCTGCTCATTACCAGGGCAGCGGAGGGTCTGGGGTGCAAGGAGAGAGAGGGACCGCATTTGGAGAACGCTaGTGGTTTATACAGCGCTTG +
Preference number: 5 (lower is better)
Translates to: SAHYQGSGGSGVQGERGTAFGER*WFIQRL
Trigger: CAAGCGCTGTATAAACCACAAGCGTTCTCCAAATGC...GGTCCCTCTCTCTCCTTGCACCCCAGACCCTCCGCTGCCCTGGTAATGAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 90 bp ATCATGAGCTCAGAGCTGTTGGACATGAGCCAGTGGTCCAGCTTCTaGACCACGTTCATGCACACCTCACAGGTCACACCGGCCTTCATC +
Preference number: 5 (lower is better)
Translates to: IMSSELLDMSQWSSF*TTFMHTSQVTPAFI
Trigger: GATGAAGGCCGGTGTGACCTGTGAGGTGTGCATGAACGTGGTGCAGAAGCTGGACCACTGGCTCATGTCCAACAGCTCTGAGCTCATGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GGCCAAACAGCAGGAGCAGAAACCACAGGAGCACTTGAACCCAGATGGAAACCCACCAGGATGTCTCGCTaGGTGCTCTTGCTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: GQTAGAETTGALEPRWKPTRMSR*VLLLSK
Trigger: CTTGGAGAGCAAGAGCACCAAGCGAGACATCCTGGT...GGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTTTCTGCTCCTGCTGTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CAGACAGCTGGAGGGCTGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGCAGGAATACTTGGTTTaGAACTTCAGCTCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: QTAGGLCSPSLPSLLHIPQEYLV*NFSSAP
Trigger: AGGAGCAGAGCTGAAGTTCAAAACCAAGTATTCCTG...CGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACAGCCCTCCAGCTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp AACGCTTGTGGTTTATACAGCGCTTGCACCGCCAGACTCTCCTGGGTGCCCCGCTTTTCCCGGGAGCTTTaGCCTGGCATATTTTGCTCT +
Preference number: 5 (lower is better)
Translates to: NACGLYSACTARLSWVPRFSREL*PGIFCS
Trigger: AGAGCAAAATATGCCAGGCAAAAGCTCCCGGGAAAA...GCGGGGCACCCAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCACAAGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp TTGCTGGGATGGGTCTCCCAAACTTCTAGGCCCAGTAGGGCCAGCTGCTCTTCTAAACCACAGGAGCACTaGAACCCAGATGGAAACCCC +
Preference number: 5 (lower is better)
Translates to: LLGWVSQTSRPSRASCSSKPQEH*NPDGNP
Trigger: GGGGTTTCCATCTGGGTTCAAGTGCTCCTGTGGTTT...AGAAGAGCAGCTGGCCCTACTGGGCCTAGAAGTTTGGGAGACCCATCCCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CAGCCAAGCCAGAGGAGGGCCTATGGCTCCATCCTGTCCCAGAGAGTGTGTCAGTGCTCAACATCTGTCTaGATTTCCCATCCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: QPSQRRAYGSILSQRVCQCSTSV*ISHPCW
Trigger: CCAGCAAGGATGGGAAATCAAGACAGATGTTGAGCA...CTGACACACTCTCTGGGACAGGATGGAGCCATAGGCCCTCCTCTGGCTTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTAGCATCCACCATCCACTaGCATCCGGCTGAAGACTCC +
Preference number: 5 (lower is better)
Translates to: LTMASEECPACVWLKVQVASTIH*HPAEDS
Trigger: GGAGTCTTCAGCCGGATGCAAGTGGATGGTGGATGC...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CAGACAGCTGGAGGGCTGTGTTCACCGTCTTTGCCCTCGCTGCTCCACATCCCGGAACGTCTCTGTGAATaGTCTCAACATTCTTGTGAG +
Preference number: 5 (lower is better)
Translates to: QTAGGLCSPSLPSLLHIPERLCE*SQHSCE
Trigger: CTCACAAGAATGTTGAGACAATTCACAGAGACGTTC...CGGGATGTGGAGCAGCGAGGGCAAAGACGGTGAACACAGCCCTCCAGCTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTAACTCCCCACGAGCACTaGCAGAGCACCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: LTMASEECPACVWLKVQVTPHEH*QSTSCV
Trigger: AACACAGGAGGTGCTCTGCAAGTGCTCGTGGGGAGT...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp GGCGCAGTCACCACCTCTGGGAAATCCATGCTCAACATCTGTCTTGATTTCCCATCTCGCTTGGTGCTCTaGCTCTCCAAGTTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: GAVTTSGKSMLNICLDFPSRLVL*LSKLWE
Trigger: CTCCCACAACTTGGAGAGCAAGAGCACCAAGCGAGA...TGGGAAATCAAGACAGATGTTGAGCATGGATTTCCCAGAGGTGGTGACTGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS-3UTR CAA 90 bp CTTACGATGGCATCTGAAGAATGCCCAGCATGTGTCTGGCTGAAGGTGCAGGTATGGTTTATACAGCGCTaGCACCGCCAGACTCTCCTG +
Preference number: 5 (lower is better)
Translates to: LTMASEECPACVWLKVQVWFIQR*HRQTLL
Trigger: CAGGAGAGTCTGGCGGTGCAAGCGCTGTATAAACCA...TACCTGCACCTTCAGCCAGACACATGCTGGGCATTCTTCAGATGCCATCGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp CTGAGGTGGGGCTGGCCCTGGTGGCCCCCAGGAGGCTaGGCAGGAGGAGCAGGGCACACAGCATGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: LRWGWPWWPPGG*AGGAGHTACCP
Trigger: TGGGCAGCATGCTGTGTGCCCTGCTCCTCCTGCCCAGCCTCCTGGGGGCCACCAGGGCCAGCCCCACCTCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 90 bp CAGCGTTGCACAGCTTGGCGGCCTCCTGGCTCCTGCACCAGAAGCTaGGGCCCAGGGCACACTGGTCGGTGCCCAGCAGTGGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: QRCTAWRPPGSCTRS*GPGHTGRCPAVGSW
Trigger: CCAGGACCCCACTGCTGGGCACCGACCAGTGTGCCCTGGGCCCAAGCTTCTGGTGCAGGAGCCAGGAGGCCGCCAAGCTGTGCAACGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp CCTGGTTCTCCGCGTCCCACTCTGGGGACGGCACGATaGCATAGGCATCATGGACTGCCCGGGCCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: PGSPRPTLGTAR*HRHHGLPGPAS
Trigger: GGAGGCGGGCCCGGGCAGTCCATGATGCCTATGCCATCGTGCCGTCCCCAGAGTGGGACGCGGAGAACCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 72 bp GCACAGCGTTGCACAGCTTGGCGGCCTCCTGGCTCCTaGACCAGAAGCTTGGGCCCAGGGCACACTGGTCGG +
Preference number: 6 (lower is better)
Translates to: AQRCTAWRPPGS*TRSLGPGHTGR
Trigger: CCGACCAGTGTGCCCTGGGCCCAAGCTTCTGGTGCAGGAGCCAGGAGGCCGCCAAGCTGTGCAACGCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 72 bp CTCTGGGGACGGCACGATGGCATAGGCATCATGGACTaGCCGGGCCCGCCTCCGGTTGCCACACAGACGGAT +
Preference number: 6 (lower is better)
Translates to: LWGRHDGIGIMD*PGPPPVATQTD
Trigger: ATCCGTCTGTGTGGCAACCGGAGGCGGGCCCGGGCAGTCCATGATGCCTATGCCATCGTGCCGTCCCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 72 bp AGCCTCCTGGAGTCGGGAGACCTGCCGTACACAGTCTaGGCACAGAGCTCCTTCAGGCGCCTGGCGGGGGTG +
Preference number: 6 (lower is better)
Translates to: SLLESGDLPYTV*AQSSFRRLAGV
Trigger: CACCCCCGCCAGGCGCCTGAAGGAGCTCTGTGCCAAGACTGTGTACGGCAGGTCTCCCGACTCCAGGAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 90 bp GGACCGGACAGCCTCCTGGAGTCGGGAGACCTGCCGTACACAGTCTaGGCACAGAGCTCCTTCAGGCGCCTGGCGGGGGTGGAAGGTAAG +
Preference number: 6 (lower is better)
Translates to: GPDSLLESGDLPYTV*AQSSFRRLAGVEGK
Trigger: CTTACCTTCCACCCCCGCCAGGCGCCTGAAGGAGCTCTGTGCCAAGACTGTGTACGGCAGGTCTCCCGACTCCAGGAGGCTGTCCGGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS TCA 72 bp CCCACAGCCCCGCACCTGGCAGCTGTCTGCAGATCCTaGCACCACACCGTGGAGCCCTTTGCACACTCCTGG +
Preference number: 6 (lower is better)
Translates to: PTAPHLAAVCRS*HHTVEPFAHSW
Trigger: CCAGGAGTGTGCAAAGGGCTCCACGGTGTGGTGTCAGGATCTGCAGACAGCTGCCAGGTGCGGGGCTGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 72 bp TCTTTGGAGAGTGGCCTCAGGGTGGCCAGGTGCCTCTaGAGCGGCTCACAGAGGCTGAGCGCTGTGCACACC +
Preference number: 6 (lower is better)
Translates to: SLESGLRVARCL*SGSQRLSAVHT
Trigger: GGTGTGCACAGCGCTCAGCCTCTGTGAGCCGCTGCAGAGGCACCTGGCCACCCTGAGGCCACTCTCCAAAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp GGGTTCAGCCCATTGCCAGCGGCGGCTGCTATGTCCTaGCATACGTCGCAGGGCAGAGACTTCGCGGTGGGT +
Preference number: 6 (lower is better)
Translates to: GFSPLPAAAAMS*HTSQGRDFAVG
Trigger: ACCCACCGCGAAGTCTCTGCCCTGCGACGTATGCCAGGACATAGCAGCCGCCGCTGGCAATGGGCTGAACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp GGGCACTGTCCGGGGCCCCACGGAGCATGCTCAGGATaGCCGAACTGTGGGCATCCACCATCCACTTGCATC +
Preference number: 6 (lower is better)
Translates to: GHCPGPHGACSG*PNCGHPPSTCI
Trigger: GATGCAAGTGGATGGTGGATGCCCACAGTTCGGCCATCCTGAGCATGCTCCGTGGGGCCCCGGACAGTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp GAAAGCACCCACCTCATGGGCCTCGCTAGCAGGCTCTaGGTCTCTGGCAGCCACGGTCACGCGTGTTCCCCA +
Preference number: 6 (lower is better)
Translates to: ESTHLMGLASRL*VSGSHGHACSP
Trigger: TGGGGAACACGCGTGACCGTGGCTGCCAGAGACCCAGAGCCTGCTAGCGAGGCCCATGAGGTGGGTGCTTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 72 bp TCAGGCGCCTGGCGGGGGTGGAAGGTAAGGGGCCCATaGGCCATGAACGGAGCCACAGCCTCAAAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: SGAWRGWKVRGP*AMNGATASKVS
Trigger: GGACACCTTTGAGGCTGTGGCTCCGTTCATGGCCAATGGGCCCCTTACCTTCCACCCCCGCCAGGCGCCTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 72 bp CGTGGCGTCAGGGTTCAGCCCATTGCCAGCGGCGGCTaGTATGTCCTGGCATACGTCGCAGGGCAGAGACTT +
Preference number: 6 (lower is better)
Translates to: RGVRVQPIASGG*YVLAYVAGQRL
Trigger: AAGTCTCTGCCCTGCGACGTATGCCAGGACATAGCAGCCGCCGCTGGCAATGGGCTGAACCCTGACGCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 72 bp GGATGTCAGACTCCGTGGCGTCAGGGTTCAGCCCATTaGCAGCGGCGGCTGCTATGTCCTGGCATACGTCGC +
Preference number: 6 (lower is better)
Translates to: GCQTPWRQGSAH*QRRLLCPGIRR
Trigger: GCGACGTATGCCAGGACATAGCAGCCGCCGCTGGCAATGGGCTGAACCCTGACGCCACGGAGTCTGACATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp ACCTGGCAGCTGTCTGCAGATCCTGACACCACACCGTaGAGCCCTTTGCACACTCCTGGGGGCCTGAGGTGG +
Preference number: 6 (lower is better)
Translates to: TWQLSADPDTTP*SPLHTPGGLRW
Trigger: CCACCTCAGGCCCCCAGGAGTGTGCAAAGGGCTCCACGGTGTGGTGTCAGGATCTGCAGACAGCTGCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp GGGGCCCCACGGAGCATGCTCAGGATGGCCGAACTGTaGGCATCCACCATCCACTTGCATCCGGCTGAAGAC +
Preference number: 6 (lower is better)
Translates to: GAPRSMLRMAEL*ASTIHLHPAED
Trigger: GTCTTCAGCCGGATGCAAGTGGATGGTGGATGCCCACAGTTCGGCCATCCTGAGCATGCTCCGTGGGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp CGTACACAGTCTTGGCACAGAGCTCCTTCAGGCGCCTaGCGGGGGTGGAAGGTAAGGGGCCCATTGGCCATG +
Preference number: 6 (lower is better)
Translates to: RTQSWHRAPSGA*RGWKVRGPLAM
Trigger: CATGGCCAATGGGCCCCTTACCTTCCACCCCCGCCAGGCGCCTGAAGGAGCTCTGTGCCAAGACTGTGTACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 90 bp CTCTCCAAGTTGTGGGAGGACACCGTGAGCAGCCTCTTGCACCCATaGCAGAAGCTGCCCTGGTTCTCCGCGTCCCACTCTGGGGACGGC +
Preference number: 6 (lower is better)
Translates to: LSKLWEDTVSSLLHP*QKLPWFSASHSGDG
Trigger: GCCGTCCCCAGAGTGGGACGCGGAGAACCAGGGCAGCTTCTGCAATGGGTGCAAGAGGCTGCTCACGGTGTCCTCCCACAACTTGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 90 bp ACCAAAGCCAGGATGTCAGACTCCGTGGCGTCAGGGTTCAGCCCATaGCCAGCGGCGGCTGCTATGTCCTGGCATACGTCGCAGGGCAGA +
Preference number: 6 (lower is better)
Translates to: TKARMSDSVASGFSP*PAAAAMSWHTSQGR
Trigger: TCTGCCCTGCGACGTATGCCAGGACATAGCAGCCGCCGCTGGCAATGGGCTGAACCCTGACGCCACGGAGTCTGACATCCTGGCTTTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 90 bp AGAGCTCCTTCAGGCGCCTGGCGGGGGTGGAAGGTAAGGGGCCCATaGGCCATGAACGGAGCCACAGCCTCAAAGGTGTCCTCTTTGGAG +
Preference number: 6 (lower is better)
Translates to: RAPSGAWRGWKVRGP*AMNGATASKVSSLE
Trigger: CTCCAAAGAGGACACCTTTGAGGCTGTGGCTCCGTTCATGGCCAATGGGCCCCTTACCTTCCACCCCCGCCAGGCGCCTGAAGGAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp CATGCTTCTGGCAGTGTTGCACAGCGTTGCACAGCTTaGCGGCCTCCTGGCTCCTGCACCAGAAGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: HASGSVAQRCTA*RPPGSCTRSLG
Trigger: GCCCAAGCTTCTGGTGCAGGAGCCAGGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 72 bp TGGCATACGTCGCAGGGCAGAGACTTCGCGGTGGGTTaGTTCCATACGGCCCCTTGGCAGTACCCCACAGCC +
Preference number: 6 (lower is better)
Translates to: WHTSQGRDFAVG*FHTAPWQYPTA
Trigger: GGCTGTGGGGTACTGCCAAGGGGCCGTATGGAACAAACCCACCGCGAAGTCTCTGCCCTGCGACGTATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 72 bp AGGATGTCAGACTCCGTGGCGTCAGGGTTCAGCCCATaGCCAGCGGCGGCTGCTATGTCCTGGCATACGTCG +
Preference number: 6 (lower is better)
Translates to: RMSDSVASGFSP*PAAAAMSWHTS
Trigger: CGACGTATGCCAGGACATAGCAGCCGCCGCTGGCAATGGGCTGAACCCTGACGCCACGGAGTCTGACATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 72 bp GCCATGAACGGAGCCACAGCCTCAAAGGTGTCCTCTTaGGAGAGTGGCCTCAGGGTGGCCAGGTGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: AMNGATASKVSS*ESGLRVARCLC
Trigger: GCAGAGGCACCTGGCCACCCTGAGGCCACTCTCCAAAGAGGACACCTTTGAGGCTGTGGCTCCGTTCATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 90 bp TGGACTGCCCGGGCCCGCCTCCGGTTGCCACACAGACGGATGAACTaGCACACCTTCTCTGGGGTGATTTTGGCCACAAGCTGCACCAAG +
Preference number: 6 (lower is better)
Translates to: WTARARLRLPHRRMN*HTFSGVILATSCTK
Trigger: CTTGGTGCAGCTTGTGGCCAAAATCACCCCAGAGAAGGTGTGCAAGTTCATCCGTCTGTGTGGCAACCGGAGGCGGGCCCGGGCAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 90 bp GGCAGGATGCTGCAGCCACCCTTGAAGGCCACCAGGATGTCTCGCTaGGTGCTCTTGCTCTCCAAGTTGTGGGAGGACACCGTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: GRMLQPPLKATRMSR*VLLLSKLWEDTVSS
Trigger: GCTGCTCACGGTGTCCTCCCACAACTTGGAGAGCAAGAGCACCAAGCGAGACATCCTGGTGGCCTTCAAGGGTGGCTGCAGCATCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 72 bp TCAGGATGGCCGAACTGTGGGCATCCACCATCCACTTaGATCCGGCTGAAGACTCCTGGCTGGGGAGCCACT +
Preference number: 6 (lower is better)
Translates to: SGWPNCGHPPST*IRLKTPGWGAT
Trigger: AGTGGCTCCCCAGCCAGGAGTCTTCAGCCGGATGCAAGTGGATGGTGGATGCCCACAGTTCGGCCATCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp TGTCCTGGCATACGTCGCAGGGCAGAGACTTCGCGGTaGGTTTGTTCCATACGGCCCCTTGGCAGTACCCCA +
Preference number: 6 (lower is better)
Translates to: CPGIRRRAETSR*VCSIRPLGSTP
Trigger: TGGGGTACTGCCAAGGGGCCGTATGGAACAAACCCACCGCGAAGTCTCTGCCCTGCGACGTATGCCAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp AGGTCTTCATCACCAAAGCCAGGATGTCAGACTCCGTaGCGTCAGGGTTCAGCCCATTGCCAGCGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: RSSSPKPGCQTP*RQGSAHCQRRL
Trigger: CAGCCGCCGCTGGCAATGGGCTGAACCCTGACGCCACGGAGTCTGACATCCTGGCTTTGGTGATGAAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp AAGTCGGCCAAGGTCAAGTTGGACCGGACAGCCTCCTaGAGTCGGGAGACCTGCCGTACACAGTCTTGGCAC +
Preference number: 6 (lower is better)
Translates to: KSAKVKLDRTAS*SRETCRTQSWH
Trigger: GTGCCAAGACTGTGTACGGCAGGTCTCCCGACTCCAGGAGGCTGTCCGGTCCAACTTGACCTTGGCCGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp ACTGCTCCTGGATGTTCAAGTCGGCCAAGGTCAAGTTaGACCGGACAGCCTCCTGGAGTCGGGAGACCTGCC +
Preference number: 6 (lower is better)
Translates to: TAPGCSSRPRSS*TGQPPGVGRPA
Trigger: GGCAGGTCTCCCGACTCCAGGAGGCTGTCCGGTCCAACTTGACCTTGGCCGACTTGAACATCCAGGAGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp ATTGCAGAAGCTGCCCTGGTTCTCCGCGTCCCACTCTaGGGACGGCACGATGGCATAGGCATCATGGACTGC +
Preference number: 6 (lower is better)
Translates to: IAEAALVLRVPL*GRHDGIGIMDC
Trigger: GCAGTCCATGATGCCTATGCCATCGTGCCGTCCCCAGAGTGGGACGCGGAGAACCAGGGCAGCTTCTGCAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 72 bp CACTGCTCCTGGATGTTCAAGTCGGCCAAGGTCAAGTaGGACCGGACAGCCTCCTGGAGTCGGGAGACCTGC +
Preference number: 6 (lower is better)
Translates to: HCSWMFKSAKVK*DRTASWSRETC
Trigger: GCAGGTCTCCCGACTCCAGGAGGCTGTCCGGTCCAACTTGACCTTGGCCGACTTGAACATCCAGGAGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 72 bp CTCTCCAAGTTGTGGGAGGACACCGTGAGCAGCCTCTaGCACCCATTGCAGAAGCTGCCCTGGTTCTCCGCG +
Preference number: 6 (lower is better)
Translates to: LSKLWEDTVSSL*HPLQKLPWFSA
Trigger: CGCGGAGAACCAGGGCAGCTTCTGCAATGGGTGCAAGAGGCTGCTCACGGTGTCCTCCCACAACTTGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 72 bp ACATGCTTCTGGCAGTGTTGCACAGCGTTGCACAGCTaGGCGGCCTCCTGGCTCCTGCACCAGAAGCTTGGG +
Preference number: 6 (lower is better)
Translates to: TCFWQCCTALHS*AASWLLHQKLG
Trigger: CCCAAGCTTCTGGTGCAGGAGCCAGGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 90 bp GTGCTCTTGCTCTCCAAGTTGTGGGAGGACACCGTGAGCAGCCTCTaGCACCCATTGCAGAAGCTGCCCTGGTTCTCCGCGTCCCACTCT +
Preference number: 6 (lower is better)
Translates to: VLLLSKLWEDTVSSL*HPLQKLPWFSASHS
Trigger: AGAGTGGGACGCGGAGAACCAGGGCAGCTTCTGCAATGGGTGCAAGAGGCTGCTCACGGTGTCCTCCCACAACTTGGAGAGCAAGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 90 bp CTGCAGCCACCCTTGAAGGCCACCAGGATGTCTCGCTTGGTGCTCTaGCTCTCCAAGTTGTGGGAGGACACCGTGAGCAGCCTCTTGCAC +
Preference number: 6 (lower is better)
Translates to: LQPPLKATRMSRLVL*LSKLWEDTVSSLLH
Trigger: GTGCAAGAGGCTGCTCACGGTGTCCTCCCACAACTTGGAGAGCAAGAGCACCAAGCGAGACATCCTGGTGGCCTTCAAGGGTGGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 90 bp TCTTTCCATACATGCTTCTGGCAGTGTTGCACAGCGTTGCACAGCTaGGCGGCCTCCTGGCTCCTGCACCAGAAGCTTGGGCCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: SFHTCFWQCCTALHS*AASWLLHQKLGPRA
Trigger: TGCCCTGGGCCCAAGCTTCTGGTGCAGGAGCCAGGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCATGTATGGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 90 bp CCCAGCGTGGAGGTGCATCTCTTTCCATACATGCTTCTGGCAGTGTaGCACAGCGTTGCACAGCTTGGCGGCCTCCTGGCTCCTGCACCA +
Preference number: 6 (lower is better)
Translates to: PSVEVHLFPYMLLAV*HSVAQLGGLLAPAP
Trigger: TGGTGCAGGAGCCAGGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCATGTATGGAAAGAGATGCACCTCCACGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS TCA 72 bp CGAACTGTGGGCATCCACCATCCACTTGCATCCGGCTaGAGACTCCTGGCTGGGGAGCCACTCACAGGTCTT +
Preference number: 6 (lower is better)
Translates to: RTVGIHHPLASG*RLLAGEPLTGL
Trigger: AAGACCTGTGAGTGGCTCCCCAGCCAGGAGTCTTCAGCCGGATGCAAGTGGATGGTGGATGCCCACAGTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 72 bp GGCAGCCACGGTCACGCGTGTTCCCCAGCGTGGAGGTaGATCTCTTTCCATACATGCTTCTGGCAGTGTTGC +
Preference number: 6 (lower is better)
Translates to: GSHGHACSPAWR*ISFHTCFWQCC
Trigger: GCAACACTGCCAGAAGCATGTATGGAAAGAGATGCACCTCCACGCTGGGGAACACGCGTGACCGTGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp GAGGCAGGCATTACCGAGCACACGCGCTCCAGGGCATaGGTGATCATGAGCTCAGAGCTGTTGGACATGAGC +
Preference number: 6 (lower is better)
Translates to: EAGITEHTRSRA*VIMSSELLDMS
Trigger: GCTCATGTCCAACAGCTCTGAGCTCATGATCACCCATGCCCTGGAGCGCGTGTGCTCGGTAATGCCTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp GTCTCTGGCAGCCACGGTCACGCGTGTTCCCCAGCGTaGAGGTGCATCTCTTTCCATACATGCTTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: VSGSHGHACSPA*RCISFHTCFWQ
Trigger: CTGCCAGAAGCATGTATGGAAAGAGATGCACCTCCACGCTGGGGAACACGCGTGACCGTGGCTGCCAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 72 bp CGCTCCAGGGCATGGGTGATCATGAGCTCAGAGCTGTaGGACATGAGCCAGTGGTCCAGCTTCTGCACCACG +
Preference number: 6 (lower is better)
Translates to: RSRAWVIMSSEL*DMSQWSSFCTT
Trigger: CGTGGTGCAGAAGCTGGACCACTGGCTCATGTCCAACAGCTCTGAGCTCATGATCACCCATGCCCTGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 72 bp CCCTTGAAGGCCACCAGGATGTCTCGCTTGGTGCTCTaGCTCTCCAAGTTGTGGGAGGACACCGTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: PLKATRMSRLVL*LSKLWEDTVSS
Trigger: GCTGCTCACGGTGTCCTCCCACAACTTGGAGAGCAAGAGCACCAAGCGAGACATCCTGGTGGCCTTCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 72 bp CTGCAGCCACCCTTGAAGGCCACCAGGATGTCTCGCTaGGTGCTCTTGCTCTCCAAGTTGTGGGAGGACACC +
Preference number: 6 (lower is better)
Translates to: LQPPLKATRMSR*VLLLSKLWEDT
Trigger: GGTGTCCTCCCACAACTTGGAGAGCAAGAGCACCAAGCGAGACATCCTGGTGGCCTTCAAGGGTGGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 90 bp GAGCACACGCGCTCCAGGGCATGGGTGATCATGAGCTCAGAGCTGTaGGACATGAGCCAGTGGTCCAGCTTCTGCACCACGTTCATGCAC +
Preference number: 6 (lower is better)
Translates to: EHTRSRAWVIMSSEL*DMSQWSSFCTTFMH
Trigger: GTGCATGAACGTGGTGCAGAAGCTGGACCACTGGCTCATGTCCAACAGCTCTGAGCTCATGATCACCCATGCCCTGGAGCGCGTGTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 90 bp AGGTGCATCTCTTTCCATACATGCTTCTGGCAGTGTTGCACAGCGTaGCACAGCTTGGCGGCCTCCTGGCTCCTGCACCAGAAGCTTGGG +
Preference number: 6 (lower is better)
Translates to: RCISFHTCFWQCCTA*HSLAASWLLHQKLG
Trigger: CCCAAGCTTCTGGTGCAGGAGCCAGGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCATGTATGGAAAGAGATGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 72 bp CTTTCCATACATGCTTCTGGCAGTGTTGCACAGCGTTaGACAGCTTGGCGGCCTCCTGGCTCCTGCACCAGA +
Preference number: 6 (lower is better)
Translates to: LSIHASGSVAQR*TAWRPPGSCTR
Trigger: TCTGGTGCAGGAGCCAGGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCATGTATGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp CCAGCGTGGAGGTGCATCTCTTTCCATACATGCTTCTaGCAGTGTTGCACAGCGTTGCACAGCTTGGCGGCC +
Preference number: 6 (lower is better)
Translates to: PAWRCISFHTCF*QCCTALHSLAA
Trigger: GGCCGCCAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCATGTATGGAAAGAGATGCACCTCCACGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 72 bp TCTTTCCATACATGCTTCTGGCAGTGTTGCACAGCGTaGCACAGCTTGGCGGCCTCCTGGCTCCTGCACCAG +
Preference number: 6 (lower is better)
Translates to: SFHTCFWQCCTA*HSLAASWLLHQ
Trigger: CTGGTGCAGGAGCCAGGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCATGTATGGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 90 bp TTGAAGGCCACCAGGATGTCTCGCTTGGTGCTCTTGCTCTCCAAGTaGTGGGAGGACACCGTGAGCAGCCTCTTGCACCCATTGCAGAAG +
Preference number: 6 (lower is better)
Translates to: LKATRMSRLVLLLSK*WEDTVSSLLHPLQK
Trigger: CTTCTGCAATGGGTGCAAGAGGCTGCTCACGGTGTCCTCCCACAACTTGGAGAGCAAGAGCACCAAGCGAGACATCCTGGTGGCCTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 72 bp TCAGAGCTGTTGGACATGAGCCAGTGGTCCAGCTTCTaGACCACGTTCATGCACACCTCACAGGTCACACCG +
Preference number: 6 (lower is better)
Translates to: SELLDMSQWSSF*TTFMHTSQVTP
Trigger: CGGTGTGACCTGTGAGGTGTGCATGAACGTGGTGCAGAAGCTGGACCACTGGCTCATGTCCAACAGCTCTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 72 bp AGGTGCATCTCTTTCCATACATGCTTCTGGCAGTGTTaGACAGCGTTGCACAGCTTGGCGGCCTCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: RCISFHTCFWQC*TALHSLAASWL
Trigger: GAGCCAGGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCATGTATGGAAAGAGATGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CCA 72 bp AGGATGTCTCGCTTGGTGCTCTTGCTCTCCAAGTTGTaGGAGGACACCGTGAGCAGCCTCTTGCACCCATTG +
Preference number: 6 (lower is better)
Translates to: RMSRLVLLLSKL*EDTVSSLLHPL
Trigger: CAATGGGTGCAAGAGGCTGCTCACGGTGTCCTCCCACAACTTGGAGAGCAAGAGCACCAAGCGAGACATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS CAA 72 bp GAGGTGCATCTCTTTCCATACATGCTTCTGGCAGTGTaGCACAGCGTTGCACAGCTTGGCGGCCTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: EVHLFPYMLLAV*HSVAQLGGLLA
Trigger: AGCCAGGAGGCCGCCAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCATGTATGGAAAGAGATGCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319098.7
CDS GCA 72 bp TGTTCCCCAGCGTGGAGGTGCATCTCTTTCCATACATaGTTCTGGCAGTGTTGCACAGCGTTGCACAGCTTG +
Preference number: 6 (lower is better)
Translates to: CSPAWRCISFHT*FWQCCTALHSL
Trigger: CAAGCTGTGCAACGCTGTGCAACACTGCCAGAAGCATGTATGGAAAGAGATGCACCTCCACGCTGGGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319098.7