RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PSAP (Homo sapiens)

Ensembl gene IDs: ENSG00000197746

Ensembl transcript IDs: ENST00000394934.4, ENST00000394936.8, ENST00000493143.1, ENST00000495196.1, ENST00000610929.3, ENST00000633965.1

Found 387 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCTTTGCTTGCTGTCTCCTGGCAACCAGAAGTGGACAGAAGCGTaGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCC +
Preference number: 1 (lower is better)
Translates to: WLCLLSPGNQKWTEA*VPKWATDSFQPPHP
Trigger: GGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCTTCTGTCCACTTCTGGTTGCCAGGAGACAGCAAGCAAAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR GCA 90 bp TTTGCTTGCTGTCTCCTGGCAACCAGAAGTGGACAGAAGCGTGGGTaGCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCA +
Preference number: 1 (lower is better)
Translates to: FACCLLATRSGQKRG*PSGPQTASNPHTPA
Trigger: TGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCTTCTGTCCACTTCTGGTTGCCAGGAGACAGCAAGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR GCA 90 bp TCAACCAAGAGGGTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATaGCAGCAGAGCTCTCTCCTCCTCCAGCAGGCGCCATGCAAGGGC +
Preference number: 1 (lower is better)
Translates to: STKRVDGLQSRNCGS*QQSSLLLQQAPCKG
Trigger: GCCCTTGCATGGCGCCTGCTGGAGGAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR CCA 90 bp TTCATGTCCTGCTGGCTTTGCTTGCTGTCTCCTGGCAACCAGAAGTaGACAGAAGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAA +
Preference number: 1 (lower is better)
Translates to: FMSCWLCLLSPGNQK*TEAWVPKWATDSFQ
Trigger: TTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCTTCTGTCCACTTCTGGTTGCCAGGAGACAGCAAGCAAAGCCAGCAGGACATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR TCA 90 bp CCAAGCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTaGTGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTC +
Preference number: 1 (lower is better)
Translates to: PSTCQGSEQGLNQEG*WPPVKKLWLMPAEL
Trigger: GAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR TCA 90 bp AAACAAGGCATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTTaGACCAGGGACAGAGAACCCTTGGCCCCACTGATGTCCCAAGCC +
Preference number: 1 (lower is better)
Translates to: KQGITRKDTGKPNHS*TRDREPLAPLMSQA
Trigger: GGCTTGGGACATCAGTGGGGCCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATGCCTTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR GCA 90 bp CACGAAGTCCATTTAATAGCAACTTCATGTCCTGCTGGCTTTGCTTaGTGTCTCCTGGCAACCAGAAGTGGACAGAAGCGTGGGTGCCCA +
Preference number: 1 (lower is better)
Translates to: HEVHLIATSCPAGFA*CLLATRSGQKRGCP
Trigger: TGGGCACCCACGCTTCTGTCCACTTCTGGTTGCCAGGAGACAGCAAGCAAAGCCAGCAGGACATGAAGTTGCTATTAAATGGACTTCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR GCA 90 bp AAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTGCTGGCTTTaGTTGCTGTCTCCTGGCAACCAGAAGTGGACAGAAGCGTGGGTG +
Preference number: 1 (lower is better)
Translates to: KSRSPFNSNFMSCWL*LLSPGNQKWTEAWV
Trigger: CACCCACGCTTCTGTCCACTTCTGGTTGCCAGGAGACAGCAAGCAAAGCCAGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR GCA 90 bp GCAAAACAAAAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTaGTGGCTTTGCTTGCTGTCTCCTGGCAACCAGAAGTGGACAGAA +
Preference number: 1 (lower is better)
Translates to: AKQKSRSPFNSNFMS*WLCLLSPGNQKWTE
Trigger: TTCTGTCCACTTCTGGTTGCCAGGAGACAGCAAGCAAAGCCAGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTTTTGTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR GCA 90 bp CCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACGCCCAGGCCCACCAGTaGCCAAGCACATGTCAGGGC +
Preference number: 2 (lower is better)
Translates to: PQQPGTCRQHEQAQRGHHAQAHQ*PSTCQG
Trigger: GCCCTGACATGTGCTTGGGCACTGGTGGGCCTGGGC...GTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR GCA 90 bp GCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCTCCAGCAGGCGCCATaGAAGGGCAGGCTAAAAGAC +
Preference number: 2 (lower is better)
Translates to: AAPQQPGTCRQHEQAQRGLQQAP*KGRLKD
Trigger: GTCTTTTAGCCTGCCCTTGCATGGCGCCTGCTGGAG...GCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR GCA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTACTCCAGCAGGCGCCATaGAAGGGCAGGCTAAAAGAC +
Preference number: 2 (lower is better)
Translates to: HTQQTLRHAALYQEARGLLQQAP*KGRLKD
Trigger: GTCTTTTAGCCTGCCCTTGCATGGCGCCTGCTGGAG...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR TCA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACAGCTGCTTTGTTCAACTaGGAGGCCCAGGAAAGCGGG +
Preference number: 2 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTAALFN*EAQESG
Trigger: CCCGCTTTCCTGGGCCTCTCAGTTGAACAAAGCAGC...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR TCA 90 bp CGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCCCAAAAGGAGCATCTATaGGACAAGGGAGGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: RGCPSGPQTASNPHTPASQKEHL*DKGGVQ
Trigger: CTGCACCCCTCCCTTGTCTCATAGATGCTCCTTTTG...GGATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR TCA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGGCTGCTTTGTTCAACTaGGAGGCCCAGGAAAGCGGG +
Preference number: 2 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQAALFN*EAQESG
Trigger: CCCGCTTTCCTGGGCCTCTCAGTTGAACAAAGCAGC...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR TCA 90 bp CCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACCTCAACCAAGAGGGTTaGTGGCCTCCAGTCAAGAAA +
Preference number: 2 (lower is better)
Translates to: PQQPGTCRQHEQAQRGHHLNQEG*WPPVKK
Trigger: TTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGAG...GTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR GCA 90 bp GCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCAGTCAAACAGATCTGTaGGTTCATTCCCCCAGACAC +
Preference number: 2 (lower is better)
Translates to: AAPQQPGTCRQHEQAQRGSQTDL*VHSPRH
Trigger: GTGTCTGGGGGAATGAACGCACAGATCTGTTTGACT...GCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR GCA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGAGAAACTGTGGCTCATaGCAGCAGAGCTCTCTCCTC +
Preference number: 2 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQRNCGS*QQSSLL
Trigger: GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCT...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR CCA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCCAGTCAAGAAACTGTaGCTCATGCCAGCAGAGCTC +
Preference number: 2 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQPVKKL*LMPAEL
Trigger: GAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGG...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR CAA 90 bp CCCAAGCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTaGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: PKHMSGLRTRPQPRG*MASSQETVAHASRA
Trigger: AGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR GCA 90 bp GCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCTTCCAAAATCCCTATaGTATTACAGTGGGAATTAC +
Preference number: 2 (lower is better)
Translates to: AAPQQPGTCRQHEQAQRGLPKSL*YYSGNY
Trigger: GTAATTCCCACTGTAATAGCATAGGGATTTTGGAAG...GCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR CAA 90 bp CAAACAAGGCATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTaGAACCAGGGACAGAGAACCCTTGGCCCCACTGATGTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: QTRHHQERHGKAKSQ*NQGQRTLGPTDVPS
Trigger: GCTTGGGACATCAGTGGGGCCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATGCCTTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR TCA 90 bp TCAACCAAGAGGGTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGAGAAAAGGGGCACTaGAGCAGCTATGTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: STKRVDGLQSRNCGSCQQREKGH*SSYVCQ
Trigger: CTGGCAGACATAGCTGCTTCAGTGCCCCTTTTCTCT...CTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR TCA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGAGAGAAAAGGGGCACTaGAGCAGCTATGTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: GKTRESQITVEPGTENPWREKGH*SSYVCQ
Trigger: CTGGCAGACATAGCTGCTTCAGTGCCCCTTTTCTCT...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR CCA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGCCAGTCAAGAAACTGTaGCTCATGCCAGCAGAGCTC +
Preference number: 2 (lower is better)
Translates to: GKTRESQITVEPGTENPWPVKKL*LMPAEL
Trigger: GAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGG...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR GCA 90 bp CCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCTAGTCAAACAGATCTGTaGGTTCATTCCCCCAGACAC +
Preference number: 2 (lower is better)
Translates to: PPVHQHPSSREKRGTEAASQTDL*VHSPRH
Trigger: GTGTCTGGGGGAATGAACGCACAGATCTGTTTGACT...AGCTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR GCA 90 bp GGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGAGTCAAACAGATCTGTaGGTTCATTCCCCCAGACAC +
Preference number: 2 (lower is better)
Translates to: GRLKDLQCINIHLAERKGSQTDL*VHSPRH
Trigger: GTGTCTGGGGGAATGAACGCACAGATCTGTTTGACT...CCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR GCA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGCTGCCTTTGTTTTGCTaGTTTGTTCAACTGAGAGGC +
Preference number: 2 (lower is better)
Translates to: GKTRESQITVEPGTENPWLPLFC*FVQLRG
Trigger: GCCTCTCAGTTGAACAAAGCAGCAAAACAAAGGCAG...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR CCA 90 bp TTAGTGCAAAACAAAAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTGCTGCGTGGGTGCCCAAGTaGGCCACAGACAGCTTCCAA +
Preference number: 2 (lower is better)
Translates to: LVQNKNHEVHLIATSCPAAWVPK*ATDSFQ
Trigger: TTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGC...AGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTTTTGTTTTGCACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR GCA 90 bp TTAGTGCAAAACAAAAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTGCTAGAAACTGTGGCTCATaGCAGCAGAGCTCTCTCCTC +
Preference number: 2 (lower is better)
Translates to: LVQNKNHEVHLIATSCPARNCGS*QQSSLL
Trigger: GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCT...AGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTTTTGTTTTGCACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR GCA 90 bp GCTTCCAAAATCCCTATGCTATTACAGTGGGAATTACATCATTTAAAAAGCCTGCTGCCTTTGTTTTGCTaGTTTGTTCAACTGAGAGGC +
Preference number: 2 (lower is better)
Translates to: ASKIPMLLQWELHHLKSLLPLFC*FVQLRG
Trigger: GCCTCTCAGTTGAACAAAGCAGCAAAACAAAGGCAG...CAGGCTTTTTAAATGATGTAATTCCCACTGTAATAGCATAGGGATTTTGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR GCA 72 bp CCAGCATCCAATCCACACCCAGCAGACCCTTCGGCATaGCGCCCTCTACCAGGAAGCCAGAGGCCTAGGAGC +
Preference number: 3 (lower is better)
Translates to: PASNPHPADPSA*RPLPGSQRPRS
Trigger: GCTCCTAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTGGATTGGATGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR CCA 72 bp GGCAACCAGAAGTGGACAGAAGCGTGGGTGCCCAAGTaGGCCACAGACAGCTTCCAACCCCCACACCCCAGC +
Preference number: 3 (lower is better)
Translates to: GNQKWTEAWVPK*ATDSFQPPHPS
Trigger: GCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCTTCTGTCCACTTCTGGTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR CAA 90 bp CCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACGGGCTAGGGGCTCCCTaGCAGACAGCAATGCTACAA +
Preference number: 3 (lower is better)
Translates to: PQQPGTCRQHEQAQRGHHGLGAP*QTAMLQ
Trigger: TTGTAGCATTGCTGTCTGCAAGGGAGCCCCTAGCCC...GTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR CAA 90 bp CGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGCCTTCGGAGACCTCAACCAAGAGGGTaGATGGCCTCCAGTCAAGAA +
Preference number: 3 (lower is better)
Translates to: RPPLSTRSHKPGPQGLRRPQPRG*MASSQE
Trigger: TTCTTGACTGGAGGCCATCAACCCTCTTGGTTGAGG...TCTCCGAAGGCCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR CAA 90 bp CCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACAGGGACAGAGAACCCTaGGCCCCACTGATGTCCCAA +
Preference number: 3 (lower is better)
Translates to: PQQPGTCRQHEQAQRGHHRDREP*APLMSQ
Trigger: TTGGGACATCAGTGGGGCCAAGGGTTCTCTGTCCCT...GTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR GCA 72 bp TGTCTCCTGGCAACCAGAAGTGGACAGAAGCGTGGGTaGCCAAGTGGGCCACAGACAGCTTCCAACCCCCAC +
Preference number: 3 (lower is better)
Translates to: CLLATRSGQKRG*PSGPQTASNPH
Trigger: GTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCTTCTGTCCACTTCTGGTTGCCAGGAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR CCA 72 bp TGCTGGCTTTGCTTGCTGTCTCCTGGCAACCAGAAGTaGACAGAAGCGTGGGTGCCCAAGTGGGCCACAGAC +
Preference number: 3 (lower is better)
Translates to: CWLCLLSPGNQK*TEAWVPKWATD
Trigger: GTCTGTGGCCCACTTGGGCACCCACGCTTCTGTCCACTTCTGGTTGCCAGGAGACAGCAAGCAAAGCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR CAA 90 bp GCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTGATGGCCTCCAGGGGCTAGGGGCTCCCTaGCAGACAGCAATGCTACAA +
Preference number: 3 (lower is better)
Translates to: AHVRAQNKASTKRVDGLQGLGAP*QTAMLQ
Trigger: TTGTAGCATTGCTGTCTGCAAGGGAGCCCCTAGCCC...CTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR CAA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTAAAAGCCAAATCACAGTaGAACCAGGGACAGAGAACC +
Preference number: 3 (lower is better)
Translates to: HTQQTLRHAALYQEARGLKAKSQ*NQGQRT
Trigger: GGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTT...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR CAA 90 bp TCAACCAAGAGGGTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGGGGCTAGGGGCTCCCTaGCAGACAGCAATGCTACAA +
Preference number: 3 (lower is better)
Translates to: STKRVDGLQSRNCGSCQQGLGAP*QTAMLQ
Trigger: TTGTAGCATTGCTGTCTGCAAGGGAGCCCCTAGCCC...CTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR GCA 72 bp CATTTAATAGCAACTTCATGTCCTGCTGGCTTTGCTTaGTGTCTCCTGGCAACCAGAAGTGGACAGAAGCGT +
Preference number: 3 (lower is better)
Translates to: HLIATSCPAGFA*CLLATRSGQKR
Trigger: ACGCTTCTGTCCACTTCTGGTTGCCAGGAGACAGCAAGCAAAGCCAGCAGGACATGAAGTTGCTATTAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR GCA 72 bp AAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTaGTGGCTTTGCTTGCTGTCTCCTGGCAACCAGAAG +
Preference number: 3 (lower is better)
Translates to: KSRSPFNSNFMS*WLCLLSPGNQK
Trigger: CTTCTGGTTGCCAGGAGACAGCAAGCAAAGCCAGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR-3UTR CAA 90 bp TTAGTGCAAAACAAAAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTGCTAAAGCCAAATCACAGTaGAACCAGGGACAGAGAACC +
Preference number: 3 (lower is better)
Translates to: LVQNKNHEVHLIATSCPAKAKSQ*NQGQRT
Trigger: GGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTT...AGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTTTTGTTTTGCACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp AGGCACAGCGCGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGGGGAGGGGTGCAGGCTaGAGCAGCGCCTCAACAGCC +
Preference number: 4 (lower is better)
Translates to: RHSAATTVHTLTQARPAGGRGAG*SSASTA
Trigger: GGCTGTTGAGGCGCTGCTTCAGCCTGCACCCCTCCC...CCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCT
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCCCCTTTGGCTGGGGCTTaGTGCGGGGGCCGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: RGCPSGPQTASNPHTPASPLAGA*CGGRPE
Trigger: CTCAGGACGGCCCCCGCAGCAAGCCCCAGCCAAAGG...GGATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR GCA 90 bp AGGCACAGCGCGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGTGCATATGTCGGCCATaGCAGGGCCCAGGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: RHSAATTVHTLTQARPAGCICRP*QGPGGH
Trigger: GTGACCGCCTGGGCCCTGGCATGGCCGACATATGCA...CCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR GCA 90 bp AGGCACAGCGCGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGGCAGACCCTTCGGCATaGCGCCCTCTACCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RHSAATTVHTLTQARPAGADPSA*RPLPGS
Trigger: GCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGC...CCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCGTGCAGGCAGCCGCGTaGCAGAGCAGAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AAPQQPGTCRQHEQAQRGVQAAA*QSRGAA
Trigger: TGCTGCACCTCTGCTCTGGCACGCGGCTGCCTGCAC...GCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp AGGCACAGCGCGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGATTCTGGCACCACACTaGCGAGCCCCTGGTGCATTC +
Preference number: 4 (lower is better)
Translates to: RHSAATTVHTLTQARPAGILAPH*RAPGAF
Trigger: GAATGCACCAGGGGCTCGGCAGTGTGGTGCCAGAAT...CCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTACAGGCAGTGCTTCACTaGCCCGCAGTCGGACGCCGT +
Preference number: 4 (lower is better)
Translates to: HTQQTLRHAALYQEARGLQAVLH*PAVGRR
Trigger: ACGGCGTCCGACTGCGGGGCAGTGAAGCACTGCCTG...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp AGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCAGGCAGTGCTTCACTaGCCCGCAGTCGGACGCCGT +
Preference number: 4 (lower is better)
Translates to: SVGAQVGHRQLPTPTPQHQAVLH*PAVGRR
Trigger: ACGGCGTCCGACTGCGGGGCAGTGAAGCACTGCCTG...ATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGCCTTCGGAGAGGACAGAAGCGTGGGTaGCCAAGTGGGCCACAGACA +
Preference number: 4 (lower is better)
Translates to: RPPLSTRSHKPGPQGLRRGQKRG*PSGPQT
Trigger: TGTCTGTGGCCCACTTGGGCACCCACGCTTCTGTCC...TCTCCGAAGGCCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp GCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCGAGACTCGCAGAGGTTaGGAGCAGAGCACACCTCCC +
Preference number: 4 (lower is better)
Translates to: AAPQQPGTCRQHEQAQRGETRRG*EQSTPP
Trigger: GGGAGGTGTGCTCTGCTCTCAACCTCTGCGAGTCTC...GCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR GCA 90 bp AGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATACGGTCTGCAGGCAGTaGTTCACTGCCCCGCAGTCG +
Preference number: 4 (lower is better)
Translates to: SVGAQVGHRQLPTPTPQHTVCRQ*FTAPQS
Trigger: CGACTGCGGGGCAGTGAAGCACTGCCTGCAGACCGT...ATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGCATATGTCGGCCATaGCAGGGCCCAGGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: PQQPGTCRQHEQAQRGHHCICRP*QGPGGH
Trigger: GTGACCGCCTGGGCCCTGGCATGGCCGACATATGCA...GTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTACCATTATCCTTTGGCTaGGGCTTGCTGCGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: HTQQTLRHAALYQEARGLPLSFG*GLLRGP
Trigger: CGGCCCCCGCAGCAAGCCCCAGCCAAAGGATAATGG...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp CGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGCCTTCGGAGAGCAGGATGGACAGGATaGAGCTGCCGTACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RPPLSTRSHKPGPQGLRRAGWTG*SCRTCP
Trigger: TGGACACGTACGGCAGCTCCATCCTGTCCATCCTGC...TCTCCGAAGGCCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp AGGCACAGCGCGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGGAAGCCACCGTCCTTTaGCTGAGTCACGTGAACGGT +
Preference number: 4 (lower is better)
Translates to: RHSAATTVHTLTQARPAGEATVL*LSHVNG
Trigger: ACCGTTCACGTGACTCAGCCAAAGGACGGTGGCTTC...CCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp CGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGCCTTCGGAGAGGTCACACTCCTCCTTaGCATGTTCCACCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RPPLSTRSHKPGPQGLRRGHTPP*HVPPRP
Trigger: AGGCCTTGGTGGAACATGTCAAGGAGGAGTGTGACC...TCTCCGAAGGCCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR TCA 90 bp AGGCACAGCGCGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGAGAGAAAAGGGGCACTaGAGCAGCTATGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RHSAATTVHTLTQARPAGREKGH*SSYVCQ
Trigger: CTGGCAGACATAGCTGCTTCAGTGCCCCTTTTCTCT...CCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCAGGCAGTGCTTCACTaGCCCGCAGTCGGACGCCGT +
Preference number: 4 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQQAVLH*PAVGRR
Trigger: ACGGCGTCCGACTGCGGGGCAGTGAAGCACTGCCTG...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGGTGCAGGCAGCCGCGTaGCAGAGCAGAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQVQAAA*QSRGAA
Trigger: TGCTGCACCTCTGCTCTGGCACGCGGCTGCCTGCAC...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGGCCCAGGCCCACCAGTaGCCAAGCACATGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQAQAHQ*PSTCQG
Trigger: GCCCTGACATGTGCTTGGGCACTGGTGGGCCTGGGC...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTACTCCGCAGTCTGCAATaGGGAGCGTCAGCTGATCCC +
Preference number: 4 (lower is better)
Translates to: HTQQTLRHAALYQEARGLLRSLQ*GASADP
Trigger: GGGATCAGCTGACGCTCCGCATTGCAGACTGCGGAG...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000610929.3
CDS-3UTR CCA 90 bp GGCCCGCAGGGCCTTCGGAGAGCTAGCAGGTTACATTCAGGCAGATGGCCCTCTCCATTATCCTTTGGCTaGGGCTTGCTGCGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GPQGLRRASRLHSGRWPSPLSFG*GLLRGP
Trigger: CGGCCCCCGCAGCAAGCCCCAGCCAAAGGATAATGG...AGAGGGCCATCTGCCTGAATGTAACCTGCTAGCTCTCCGAAGGCCCTGCGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp GCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCTCTTGGAGGCCACTTTaGCGGGGACCAGAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: AAPQQPGTCRQHEQAQRGSWRPL*RGPESA
Trigger: TGCAGACTCTGGTCCCCGCCAAAGTGGCCTCCAAGA...GCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp AGGCACAGCGCGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGCCAGTCAAGAAACTGTaGCTCATGCCAGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RHSAATTVHTLTQARPAGPVKKL*LMPAEL
Trigger: GAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGG...CCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp AGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATGCGTGGGTGCCCAAGTaGGCCACAGACAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SVGAQVGHRQLPTPTPQHAWVPK*ATDSFQ
Trigger: TTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGC...ATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCCAAGTGGACAGAAGCGTaGGTGCCCAAGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: RGCPSGPQTASNPHTPASKWTEA*VPKWAT
Trigger: TGTGGCCCACTTGGGCACCCACGCTTCTGTCCACTT...GGATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACCCTGGCAACCAGAAGTaGACAGAAGCGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PQQPGTCRQHEQAQRGHHPGNQK*TEAWVP
Trigger: GGGCACCCACGCTTCTGTCCACTTCTGGTTGCCAGG...GTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp GGCCCGCAGGGCCTTCGGAGAGCTAGCAGGTTACATTCAGGCAGATGGCCCTCTGAGACTCGCAGAGGTTaGGAGCAGAGCACACCTCCC +
Preference number: 4 (lower is better)
Translates to: GPQGLRRASRLHSGRWPSETRRG*EQSTPP
Trigger: GGGAGGTGTGCTCTGCTCTCAACCTCTGCGAGTCTC...AGAGGGCCATCTGCCTGAATGTAACCTGCTAGCTCTCCGAAGGCCCTGCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR TCA 90 bp CCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACGCTGCTTTGTTCAACTaGGAGGCCCAGGAAAGCGGG +
Preference number: 4 (lower is better)
Translates to: PQQPGTCRQHEQAQRGHHAALFN*EAQESG
Trigger: CCCGCTTTCCTGGGCCTCTCAGTTGAACAAAGCAGC...GTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGCCTTCGGAGACACGGGCTCGTACTCTaGCACAAACTGATCACACTG +
Preference number: 4 (lower is better)
Translates to: RPPLSTRSHKPGPQGLRRHGLVL*HKLITL
Trigger: CAGTGTGATCAGTTTGTGGCAGAGTACGAGCCCGTG...TCTCCGAAGGCCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp AGGCACAGCGCGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGACATGGCGTTTGCAATaGTCGACAGCATTGCACTGG +
Preference number: 4 (lower is better)
Translates to: RHSAATTVHTLTQARPAGTWRLQ*STALHW
Trigger: CCAGTGCAATGCTGTCGAGCATTGCAAACGCCATGT...CCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp AGGCACAGCGCGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGTCCACACATGGCGTTTaGAATGCTCGACAGCATTGC +
Preference number: 4 (lower is better)
Translates to: RHSAATTVHTLTQARPAGSTHGV*NARQHC
Trigger: GCAATGCTGTCGAGCATTGCAAACGCCATGTGTGGA...CCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTCCAGCGCCCAGGCCCACCAGTaGCCAAGCACATGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ASSQETVAHASRALSSSSAQAHQ*PSTCQG
Trigger: GCCCTGACATGTGCTTGGGCACTGGTGGGCCTGGGC...GCTGGAGGAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGGCAGACCCTTCGGCATaGCGCCCTCTACCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQADPSA*RPLPGS
Trigger: GCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGC...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTATCTGACTCCGCAGTCTaGAATGCGGAGCGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HTQQTLRHAALYQEARGLSDSAV*NAERQL
Trigger: CAGCTGACGCTCCGCATTGCAGACTGCGGAGTCAGA...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000610929.3
CDS-3UTR CCA 90 bp AGGCACAGCGCGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGGCTCTGGGATCTTATTaGACTCCAGCTGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RHSAATTVHTLTQARPAGALGSY*TPAASG
Trigger: ACCAGAAGCAGCTGGAGTCCAATAAGATCCCAGAGC...CCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACAGTCCCCATTATCCTTTaGCTGGGGCTTGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTVPIIL*LGLAAG
Trigger: CCCCGCAGCAAGCCCCAGCCAAAGGATAATGGGGAC...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp GCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCGAAGCCACCGTCCTTTaGCTGAGTCACGTGAACGGT +
Preference number: 4 (lower is better)
Translates to: AAPQQPGTCRQHEQAQRGEATVL*LSHVNG
Trigger: ACCGTTCACGTGACTCAGCCAAAGGACGGTGGCTTC...GCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGCCTTCGGAGACTGGCACCAGTAGCTTaGGCCCCATATACACTTCTC +
Preference number: 4 (lower is better)
Translates to: RPPLSTRSHKPGPQGLRRLAPVA*APYTLL
Trigger: GAGAAGTGTATATGGGGCCCAAGCTACTGGTGCCAG...TCTCCGAAGGCCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGCCTTCGGAGACCAGTCAAGAAACTGTaGCTCATGCCAGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RPPLSTRSHKPGPQGLRRPVKKL*LMPAEL
Trigger: GAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGG...TCTCCGAAGGCCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACAGTACATAGCGCCGTCTaGCTCCGCAGTCTGCAATGC +
Preference number: 4 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTVHSAV*LRSLQC
Trigger: GCATTGCAGACTGCGGAGTCAGACGGCGCTATGTAC...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp AGGCACAGCGCGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGTATCACCAGCTGCGGTaGCAACGTCTTTGCATATGT +
Preference number: 4 (lower is better)
Translates to: RHSAATTVHTLTQARPAGYHQLR*QRLCIC
Trigger: ACATATGCAAAGACGTTGTCACCGCAGCTGGTGATA...CCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp GCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTCCAGCGAGGGATGTTGGCCATaGAGGGGGCCACCACCTCAG +
Preference number: 4 (lower is better)
Translates to: ASSQETVAHASRALSSSSEGCWP*RGPPPQ
Trigger: CTGAGGTGGTGGCCCCCTTCATGGCCAACATCCCTC...GCTGGAGGAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR TCA 90 bp CGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCCATGCGGAGCGTCAGCTaGTCCCCCGCAGATATAAAT +
Preference number: 4 (lower is better)
Translates to: RGCPSGPQTASNPHTPASMRSVS*SPADIN
Trigger: ATTTATATCTGCGGGGGATCAGCTGACGCTCCGCAT...GGATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000610929.3
CDS-3UTR GCA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTACTGCCGAGCCCCTGGTaGATTCTTTCAGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: HTQQTLRHAALYQEARGLLPSPW*ILSVQG
Trigger: TCCTTGGACTGAAAGAATGCACCAGGGGCTCGGCAG...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACAATTCTGGCACCACACTaGCGAGCCCCTGGTGCATTC +
Preference number: 4 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTILAPH*RAPGAF
Trigger: GAATGCACCAGGGGCTCGGCAGTGTGGTGCCAGAAT...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTCCAGCCACGTGAACGGTCAGTaGAGGCAGCCGCGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ASSQETVAHASRALSSSSHVNGQ*RQPRAR
Trigger: TCTGGCACGCGGCTGCCTGCACTGACCGTTCACGTG...GCTGGAGGAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCGCAGCCAGGATCTCCTaGTTGGTGCTGTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: AAPQQPGTCRQHEQAQRGAARIS*LVLFFS
Trigger: GGAGAAAAACAGCACCAAGCAGGAGATCCTGGCTGC...GCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCAATGCTCGACAGCATTaGACTGGGCTGCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: AAPQQPGTCRQHEQAQRGNARQH*TGLLSL
Trigger: CAGAGACAGCAGCCCAGTGCAATGCTGTCGAGCATT...GCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGCCTTCGGAGAACATGGCGTTTGCAATaGTCGACAGCATTGCACTGG +
Preference number: 4 (lower is better)
Translates to: RPPLSTRSHKPGPQGLRRTWRLQ*STALHW
Trigger: CCAGTGCAATGCTGTCGAGCATTGCAAACGCCATGT...TCTCCGAAGGCCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp AGGCACAGCGCGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGAGTCAAACAGATCTGTaGGTTCATTCCCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: RHSAATTVHTLTQARPAGSQTDL*VHSPRH
Trigger: GTGTCTGGGGGAATGAACGCACAGATCTGTTTGACT...CCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGGGACAGAAGCGTGGGTaGCCAAGTGGGCCACAGACA +
Preference number: 4 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQGQKRG*PSGPQT
Trigger: TGTCTGTGGCCCACTTGGGCACCCACGCTTCTGTCC...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCCATGTCCTGCTGGCTTTaGTTGCTGTCTCCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: RGCPSGPQTASNPHTPASMSCWL*LLSPGN
Trigger: GTTGCCAGGAGACAGCAAGCAAAGCCAGCAGGACAT...GGATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACATCTGACTCCGCAGTCTaGAATGCGGAGCGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTSDSAV*NAERQL
Trigger: CAGCTGACGCTCCGCATTGCAGACTGCGGAGTCAGA...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000610929.3
CDS-3UTR CCA 90 bp CGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCCGGACAAAGGTGGAGTTaGTCCGTACAGCAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: RGCPSGPQTASNPHTPASGQRWS*SVQQSG
Trigger: TCCAGACTGCTGTACGGACCAACTCCACCTTTGTCC...GGATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp CCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACGAAGCCACCGTCCTTTaGCTGAGTCACGTGAACGGT +
Preference number: 4 (lower is better)
Translates to: PQQPGTCRQHEQAQRGHHEATVL*LSHVNG
Trigger: ACCGTTCACGTGACTCAGCCAAAGGACGGTGGCTTC...GTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp GGCCCGCAGGGCCTTCGGAGAGCTAGCAGGTTACATTCAGGCAGATGGCCCTCTAAGTGGACAGAAGCGTaGGTGCCCAAGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: GPQGLRRASRLHSGRWPSKWTEA*VPKWAT
Trigger: TGTGGCCCACTTGGGCACCCACGCTTCTGTCCACTT...AGAGGGCCATCTGCCTGAATGTAACCTGCTAGCTCTCCGAAGGCCCTGCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGCCTTCGGAGATTGCTTGCTGTCTCCTaGCAACCAGAAGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: RPPLSTRSHKPGPQGLRRLLAVS*QPEVDR
Trigger: TCTGTCCACTTCTGGTTGCCAGGAGACAGCAAGCAA...TCTCCGAAGGCCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp CGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCCATGTCAGTCACCATCTaGATGCAGTCCTGGCAAACG +
Preference number: 4 (lower is better)
Translates to: RGCPSGPQTASNPHTPASMSVTI*MQSWQT
Trigger: CGTTTGCCAGGACTGCATTCAGATGGTGACTGACAT...GGATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR TCA 90 bp GGCCCGCAGGGCCTTCGGAGAGCTAGCAGGTTACATTCAGGCAGATGGCCCTCTGGTCACACTCCTCCTTaGCATGTTCCACCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: GPQGLRRASRLHSGRWPSGHTPP*HVPPRP
Trigger: AGGCCTTGGTGGAACATGTCAAGGAGGAGTGTGACC...AGAGGGCCATCTGCCTGAATGTAACCTGCTAGCTCTCCGAAGGCCCTGCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR TCA 90 bp CCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACAGAGAAAAGGGGCACTaGAGCAGCTATGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PQQPGTCRQHEQAQRGHHREKGH*SSYVCQ
Trigger: CTGGCAGACATAGCTGCTTCAGTGCCCCTTTTCTCT...GTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp TCAACCAAGAGGGTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGGGGAGGGGTGCAGGCTaGAGCAGCGCCTCAACAGCC +
Preference number: 4 (lower is better)
Translates to: STKRVDGLQSRNCGSCQQGRGAG*SSASTA
Trigger: GGCTGTTGAGGCGCTGCTTCAGCCTGCACCCCTCCC...CTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp AGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCAAAAGGAGCATCTATaGGACAAGGGAGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SVGAQVGHRQLPTPTPQHQKEHL*DKGGVQ
Trigger: CTGCACCCCTCCCTTGTCTCATAGATGCTCCTTTTG...ATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp CCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACATGCGGAGCGTCAGCTaGTCCCCCGCAGATATAAAT +
Preference number: 4 (lower is better)
Translates to: PQQPGTCRQHEQAQRGHHMRSVS*SPADIN
Trigger: ATTTATATCTGCGGGGGATCAGCTGACGCTCCGCAT...GTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000610929.3
CDS-3UTR GCA 90 bp CGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCCCAGCATATCACCAGCTaGGGTGACAACGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: RGCPSGPQTASNPHTPASQHITS*GDNVFA
Trigger: TGCAAAGACGTTGTCACCGCAGCTGGTGATATGCTG...GGATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp TCAACCAAGAGGGTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGCCTTTGGCTGGGGCTTaGTGCGGGGGCCGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: STKRVDGLQSRNCGSCQQPLAGA*CGGRPE
Trigger: CTCAGGACGGCCCCCGCAGCAAGCCCCAGCCAAAGG...CTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR GCA 90 bp AGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCAGTCACCATCTGAATaGAGTCCTGGCAAACGTCCC +
Preference number: 4 (lower is better)
Translates to: SVGAQVGHRQLPTPTPQHQSPSE*SPGKRP
Trigger: GGGACGTTTGCCAGGACTGCATTCAGATGGTGACTG...ATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR GCA 90 bp AGGCACAGCGCGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGGTAAACATCAGACTTTaGTGGGACCTCGTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RHSAATTVHTLTQARPAGVNIRL*WDLVLL
Trigger: AAGAAGCACGAGGTCCCAGCAAAGTCTGATGTTTAC...CCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR GCA 90 bp GCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTGATGGCCTCCAGCACGTGAACGGTCAGTaGAGGCAGCCGCGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: AHVRAQNKASTKRVDGLQHVNGQ*RQPRAR
Trigger: TCTGGCACGCGGCTGCCTGCACTGACCGTTCACGTG...CTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACAGGTCTGGCAGGAAGCTaGAGCCTTTCTCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTGLAGS*SLSQEQ
Trigger: CTGCTCTTGAGAAAGGCTGCAGCTTCCTGCCAGACC...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp AGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCACGGGCTCGTACTCTaGCACAAACTGATCACACTG +
Preference number: 4 (lower is better)
Translates to: SVGAQVGHRQLPTPTPQHHGLVL*HKLITL
Trigger: CAGTGTGATCAGTTTGTGGCAGAGTACGAGCCCGTG...ATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTAAATGCTCGACAGCATTaGACTGGGCTGCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: HTQQTLRHAALYQEARGLNARQH*TGLLSL
Trigger: CAGAGACAGCAGCCCAGTGCAATGCTGTCGAGCATT...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCTCCACACATGGCGTTTaGAATGCTCGACAGCATTGC +
Preference number: 4 (lower is better)
Translates to: AAPQQPGTCRQHEQAQRGSTHGV*NARQHC
Trigger: GCAATGCTGTCGAGCATTGCAAACGCCATGTGTGGA...GCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp AGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATAGAAACTGTGGCTCATaGCAGCAGAGCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SVGAQVGHRQLPTPTPQHRNCGS*QQSSLL
Trigger: GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCT...ATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTAAGAAACTGTGGCTCATaGCAGCAGAGCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: HTQQTLRHAALYQEARGLRNCGS*QQSSLL
Trigger: GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCT...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GGCCCGCAGGGCCTTCGGAGAGCTAGCAGGTTACATTCAGGCAGATGGCCCTCTCCTGCTGGCTTTGCTTaGTGTCTCCTGGCAACCAGA +
Preference number: 4 (lower is better)
Translates to: GPQGLRRASRLHSGRWPSPAGFA*CLLATR
Trigger: TCTGGTTGCCAGGAGACAGCAAGCAAAGCCAGCAGG...AGAGGGCCATCTGCCTGAATGTAACCTGCTAGCTCTCCGAAGGCCCTGCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACACCTGCTGGCTTTGCTTaGTGTCTCCTGGCAACCAGA +
Preference number: 4 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTPAGFA*CLLATR
Trigger: TCTGGTTGCCAGGAGACAGCAAGCAAAGCCAGCAGG...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTATCTGCTAGGTGCTTCTaGAGAGACTCGCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: HTQQTLRHAALYQEARGLSARCF*RDSQRL
Trigger: CAACCTCTGCGAGTCTCTCCAGAAGCACCTAGCAGA...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGAAGTGGACAGAAGCGTaGGTGCCCAAGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQKWTEA*VPKWAT
Trigger: TGTGGCCCACTTGGGCACCCACGCTTCTGTCCACTT...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCCGCGCACAGATCTCCTTaGGTTGCTGAAGAGACATGT +
Preference number: 4 (lower is better)
Translates to: RGCPSGPQTASNPHTPASAHRSP*VAEETC
Trigger: ACATGTCTCTTCAGCAACCCAAGGAGATCTGTGCGC...GGATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394934.4
CDS-3UTR TCA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGTCCAGCTGCTTCTGGTaGTTCAGCTCTGCTAGGTGC +
Preference number: 4 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQSSCFW*FSSARC
Trigger: GCACCTAGCAGAGCTGAATCACCAGAAGCAGCTGGA...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR TCA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTACTCAACCAAGAGGGTTaGTGGCCTCCAGTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: HTQQTLRHAALYQEARGLLNQEG*WPPVKK
Trigger: TTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGAG...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp AGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCTCAACCAAGAGGGTTaGTGGCCTCCAGTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: SVGAQVGHRQLPTPTPQHLNQEG*WPPVKK
Trigger: TTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGAG...ATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACATTGTTCCAAACGGTCTaGAGGCAGTGCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTLFQTV*RQCFTA
Trigger: GGCAGTGAAGCACTGCCTGCAGACCGTTTGGAACAA...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp AGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATACATGGCGTTTGCAATaGTCGACAGCATTGCACTGG +
Preference number: 4 (lower is better)
Translates to: SVGAQVGHRQLPTPTPQHTWRLQ*STALHW
Trigger: CCAGTGCAATGCTGTCGAGCATTGCAAACGCCATGT...ATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTGATGGCCTCCAGCTCCGCAGTCTGCAATaGGGAGCGTCAGCTGATCCC +
Preference number: 4 (lower is better)
Translates to: AHVRAQNKASTKRVDGLQLRSLQ*GASADP
Trigger: GGGATCAGCTGACGCTCCGCATTGCAGACTGCGGAG...CTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000610929.3
CDS-3UTR CCA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACAACACTGCCGAGCCCCTaGTGCATTCTTTCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTTLPSP*CILSVQ
Trigger: TTGGACTGAAAGAATGCACCAGGGGCTCGGCAGTGT...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACGCTCTGGGATCTTATTaGACTCCAGCTGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PQQPGTCRQHEQAQRGHHALGSY*TPAASG
Trigger: ACCAGAAGCAGCTGGAGTCCAATAAGATCCCAGAGC...GTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp GCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTCCAGCTCTTGGAGGCCACTTTaGCGGGGACCAGAGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ASSQETVAHASRALSSSSSWRPL*RGPESA
Trigger: TGCAGACTCTGGTCCCCGCCAAAGTGGCCTCCAAGA...GCTGGAGGAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp GGCCCGCAGGGCCTTCGGAGAGCTAGCAGGTTACATTCAGGCAGATGGCCCTCTCTTCTGGTAAGGGTCTaGCAGGAAGCTGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GPQGLRRASRLHSGRWPSLLVRV*QEAAAF
Trigger: AAAGGCTGCAGCTTCCTGCCAGACCCTTACCAGAAG...AGAGGGCCATCTGCCTGAATGTAACCTGCTAGCTCTCCGAAGGCCCTGCGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACACTGGCACCAGTAGCTTaGGCCCCATATACACTTCTC +
Preference number: 4 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTLAPVA*APYTLL
Trigger: GAGAAGTGTATATGGGGCCCAAGCTACTGGTGCCAG...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTGATGGCCTCCAGTGGACAGGATGGAGCTaGCGTACGTGTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: AHVRAQNKASTKRVDGLQWTGWS*RTCPPP
Trigger: AGGTGGTGGACACGTACGGCAGCTCCATCCTGTCCA...CTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR GCA 90 bp GACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGGTGCAGGCAGCCGCGTaGCAGAGCAGAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: DLQCINIHLAERKGALKQVQAAA*QSRGAA
Trigger: TGCTGCACCTCTGCTCTGGCACGCGGCTGCCTGCAC...CTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTCCAGCGGTCTGGCAGGAAGCTaGAGCCTTTCTCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ASSQETVAHASRALSSSSGLAGS*SLSQEQ
Trigger: CTGCTCTTGAGAAAGGCTGCAGCTTCCTGCCAGACC...GCTGGAGGAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCCAAGGGATTTCACTGTTaGCTTGTTCCAAACGGTCTG +
Preference number: 4 (lower is better)
Translates to: RGCPSGPQTASNPHTPASKGFHC*LVPNGL
Trigger: CAGACCGTTTGGAACAAGCCAACAGTGAAATCCCTT...GGATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp AGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATGGATCTCCTCCTCAGTaGCATTGTCCTTCAGCATAT +
Preference number: 4 (lower is better)
Translates to: SVGAQVGHRQLPTPTPQHGSPPQ*HCPSAY
Trigger: ATATGCTGAAGGACAATGCCACTGAGGAGGAGATCC...ATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTAGGATCTCCTCCTCAGTaGCATTGTCCTTCAGCATAT +
Preference number: 4 (lower is better)
Translates to: HTQQTLRHAALYQEARGLGSPPQ*HCPSAY
Trigger: ATATGCTGAAGGACAATGCCACTGAGGAGGAGATCC...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGGGACAAAGGTGGAGTTaGTCCGTACAGCAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQGQRWS*SVQQSG
Trigger: TCCAGACTGCTGTACGGACCAACTCCACCTTTGTCC...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACAGGACCAGAGTCTGCATaGGCATCTCTTTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTGPESA*ASLSPH
Trigger: ATGAGGTGAAAGAGATGCCCATGCAGACTCTGGTCC...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTATGTTGTCAATCAGCTTaGTCACCTCCTTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: HTQQTLRHAALYQEARGLCCQSA*SPPSPG
Trigger: TCCTGGTGAAGGAGGTGACCAAGCTGATTGACAACA...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp GTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCGCGTGGGTGCCCAAGTaGGCCACAGACAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VDGLQSRNCGSCQQSSLLAWVPK*ATDSFQ
Trigger: TTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGC...GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp GCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTGATGGCCTCCAGTCCAGCTGCTTCTGGTaGTTCAGCTCTGCTAGGTGC +
Preference number: 4 (lower is better)
Translates to: AHVRAQNKASTKRVDGLQSSCFW*FSSARC
Trigger: GCACCTAGCAGAGCTGAATCACCAGAAGCAGCTGGA...CTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR TCA 90 bp GCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTCCAGCAGAGAAAAGGGGCACTaGAGCAGCTATGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ASSQETVAHASRALSSSSREKGH*SSYVCQ
Trigger: CTGGCAGACATAGCTGCTTCAGTGCCCCTTTTCTCT...GCTGGAGGAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp GTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCGCTGCTTTGTTCAACTaGGAGGCCCAGGAAAGCGGG +
Preference number: 4 (lower is better)
Translates to: VDGLQSRNCGSCQQSSLLAALFN*EAQESG
Trigger: CCCGCTTTCCTGGGCCTCTCAGTTGAACAAAGCAGC...GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCTACGGTCTGCAGGCAGTaGTTCACTGCCCCGCAGTCG +
Preference number: 4 (lower is better)
Translates to: PPVHQHPSSREKRGTEAATVCRQ*FTAPQS
Trigger: CGACTGCGGGGCAGTGAAGCACTGCCTGCAGACCGT...AGCTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp AGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATAGTCCACTATCTCCTTaGATGAAGCAGACATGTTCG +
Preference number: 4 (lower is better)
Translates to: SVGAQVGHRQLPTPTPQHSPLSP*MKQTCS
Trigger: CGAACATGTCTGCTTCATGCAAGGAGATAGTGGACT...ATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR GCA 90 bp CCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTCCTTGGGTTGCATGTaGATCATCATCTGGATAGCA +
Preference number: 4 (lower is better)
Translates to: PQQPGTCRQHEQAQRGHHSLGCM*IIIWIA
Trigger: TGCTATCCAGATGATGATGCACATGCAACCCAAGGA...GTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394936.8
CDS-3UTR GCA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTAGTAAACATCAGACTTTaGTGGGACCTCGTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: HTQQTLRHAALYQEARGLVNIRL*WDLVLL
Trigger: AAGAAGCACGAGGTCCCAGCAAAGTCTGATGTTTAC...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR GCA 90 bp GCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTCCAGCAACCCACCAGCTTCTTaGACACTTCGCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ASSQETVAHASRALSSSSNPPAS*TLRRSH
Trigger: GTGGCTTCTGCGAAGTGTGCAAGAAGCTGGTGGGTT...GCTGGAGGAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCCTGTTTTTCTCCAGGTTaGGATCCAAATAACCCACCA +
Preference number: 4 (lower is better)
Translates to: RGCPSGPQTASNPHTPASCFSPG*DPNNPP
Trigger: TGGTGGGTTATTTGGATCGCAACCTGGAGAAAAACA...GGATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTCCAGCGCAGCCAGGATCTCCTaGTTGGTGCTGTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ASSQETVAHASRALSSSSAARIS*LVLFFS
Trigger: GGAGAAAAACAGCACCAAGCAGGAGATCCTGGCTGC...GCTGGAGGAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GGCCCGCAGGGCCTTCGGAGAGCTAGCAGGTTACATTCAGGCAGATGGCCCTCTAGTCAAACAGATCTGTaGGTTCATTCCCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: GPQGLRRASRLHSGRWPSSQTDL*VHSPRH
Trigger: GTGTCTGGGGGAATGAACGCACAGATCTGTTTGACT...AGAGGGCCATCTGCCTGAATGTAACCTGCTAGCTCTCCGAAGGCCCTGCGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTCCAGCAGGCGCCATaGAAGGGCAGGCTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: VDGLQSRNCGSCQQSSLLLQQAP*KGRLKD
Trigger: GTCTTTTAGCCTGCCCTTGCATGGCGCCTGCTGGAG...GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAGCCCAGGCCCACCAGTaGCCAAGCACATGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: HHQERHGKAKSQLNQGQRAQAHQ*PSTCQG
Trigger: GCCCTGACATGTGCTTGGGCACTGGTGGGCCTGGGC...TCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGGCAGACCCTTCGGCATaGCGCCCTCTACCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GKTRESQITVEPGTENPWADPSA*RPLPGS
Trigger: GCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGC...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp TCAACCAAGAGGGTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGGGACAGAAGCGTGGGTaGCCAAGTGGGCCACAGACA +
Preference number: 4 (lower is better)
Translates to: STKRVDGLQSRNCGSCQQGQKRG*PSGPQT
Trigger: TGTCTGTGGCCCACTTGGGCACCCACGCTTCTGTCC...CTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTGATGGCCTCCAGCCTGCTGGCTTTGCTTaGTGTCTCCTGGCAACCAGA +
Preference number: 4 (lower is better)
Translates to: AHVRAQNKASTKRVDGLQPAGFA*CLLATR
Trigger: TCTGGTTGCCAGGAGACAGCAAGCAAAGCCAGCAGG...CTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CAGGCGCCATGCAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGTCCCCATTATCCTTTaGCTGGGGCTTGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: QAPCKGRLKDLQCINIHLVPIIL*LGLAAG
Trigger: CCCCGCAGCAAGCCCCAGCCAAAGGATAATGGGGAC...TAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTGCATGGCGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp GCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTGATGGCCTCCAGAGGCCTGGACAAAGGTaGAGTTGGTCCGTACAGCAG +
Preference number: 4 (lower is better)
Translates to: AHVRAQNKASTKRVDGLQRPGQR*SWSVQQ
Trigger: CTGCTGTACGGACCAACTCCACCTTTGTCCAGGCCT...CTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp GCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTCCAGCTGTTCCACCAAGGCCTaGACAAAGGTGGAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: ASSQETVAHASRALSSSSCSTKA*TKVELV
Trigger: GACCAACTCCACCTTTGTCCAGGCCTTGGTGGAACA...GCTGGAGGAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGGCGCACAGATCTCCTTaGGTTGCATGTGCATCATCA +
Preference number: 4 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQAHRSP*VACASS
Trigger: TGATGATGCACATGCAACCCAAGGAGATCTGTGCGC...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394936.8
CDS-3UTR CCA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACATGTTGTCAATCAGCTTaGTCACCTCCTTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTCCQSA*SPPSPG
Trigger: TCCTGGTGAAGGAGGTGACCAAGCTGATTGACAACA...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp CAGGCGCCATGCAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCGTGGGTGCCCAAGTaGGCCACAGACAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: QAPCKGRLKDLQCINIHLAWVPK*ATDSFQ
Trigger: TTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGC...TAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTGCATGGCGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CAGGCGCCATGCAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTACCTGGCAACCAGAAGTaGACAGAAGCGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QAPCKGRLKDLQCINIHLPGNQK*TEAWVP
Trigger: GGGCACCCACGCTTCTGTCCACTTCTGGTTGCCAGG...TAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTGCATGGCGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp CATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAGAGGGATGTTGGCCATaGAGGGGGCCACCACCTCAG +
Preference number: 4 (lower is better)
Translates to: HHQERHGKAKSQLNQGQREGCWP*RGPPPQ
Trigger: CTGAGGTGGTGGCCCCCTTCATGGCCAACATCCCTC...TCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR GCA 90 bp GGCCCGCAGGGCCTTCGGAGAGCTAGCAGGTTACATTCAGGCAGATGGCCCTCTCTGCCTTTGTTTTGCTaGTTTGTTCAACTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GPQGLRRASRLHSGRWPSLPLFC*FVQLRG
Trigger: GCCTCTCAGTTGAACAAAGCAGCAAAACAAAGGCAG...AGAGGGCCATCTGCCTGAATGTAACCTGCTAGCTCTCCGAAGGCCCTGCGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGGCCGTCTTCACATTCTaGCACCACACTGCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: GKTRESQITVEPGTENPWAVFTF*HHTAEP
Trigger: GGGCTCGGCAGTGTGGTGCCAGAATGTGAAGACGGC...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGGGATCTCCTCCTCAGTaGCATTGTCCTTCAGCATAT +
Preference number: 4 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQGSPPQ*HCPSAY
Trigger: ATATGCTGAAGGACAATGCCACTGAGGAGGAGATCC...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp GCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTCCAGCGGACCAGAGTCTGCATaGGCATCTCTTTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: ASSQETVAHASRALSSSSGPESA*ASLSPH
Trigger: ATGAGGTGAAAGAGATGCCCATGCAGACTCTGGTCC...GCTGGAGGAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR TCA 90 bp CCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCTGCTGCTTTGTTCAACTaGGAGGCCCAGGAAAGCGGG +
Preference number: 4 (lower is better)
Translates to: PPVHQHPSSREKRGTEAAAALFN*EAQESG
Trigger: CCCGCTTTCCTGGGCCTCTCAGTTGAACAAAGCAGC...AGCTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCTATTCTGGCACCACACTaGCGAGCCCCTGGTGCATTC +
Preference number: 4 (lower is better)
Translates to: PPVHQHPSSREKRGTEAAILAPH*RAPGAF
Trigger: GAATGCACCAGGGGCTCGGCAGTGTGGTGCCAGAAT...AGCTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTGATGGCCTCCAGCAGCATATCACCAGCTaGGGTGACAACGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: AHVRAQNKASTKRVDGLQQHITS*GDNVFA
Trigger: TGCAAAGACGTTGTCACCGCAGCTGGTGATATGCTG...CTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCTGCGGGGACCAGAGTCTaGATGGGCATCTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: PPVHQHPSSREKRGTEAAAGTRV*MGISFT
Trigger: GGTGAAAGAGATGCCCATGCAGACTCTGGTCCCCGC...AGCTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR GCA 90 bp GTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCAACCCACCAGCTTCTTaGACACTTCGCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VDGLQSRNCGSCQQSSLLNPPAS*TLRRSH
Trigger: GTGGCTTCTGCGAAGTGTGCAAGAAGCTGGTGGGTT...GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GGCCCGCAGGGCCTTCGGAGAGCTAGCAGGTTACATTCAGGCAGATGGCCCTCTTGTTTTTCTCCAGGTTaGGATCCAAATAACCCACCA +
Preference number: 4 (lower is better)
Translates to: GPQGLRRASRLHSGRWPSCFSPG*DPNNPP
Trigger: TGGTGGGTTATTTGGATCGCAACCTGGAGAAAAACA...AGAGGGCCATCTGCCTGAATGTAACCTGCTAGCTCTCCGAAGGCCCTGCGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGCTCCAGCAGGCGCCATaGAAGGGCAGGCTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: GKTRESQITVEPGTENPWLQQAP*KGRLKD
Trigger: GTCTTTTAGCCTGCCCTTGCATGGCGCCTGCTGGAG...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCATGTCCTGCTGGCTTTaGTTGCTGTCTCCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: VDGLQSRNCGSCQQSSLLMSCWL*LLSPGN
Trigger: GTTGCCAGGAGACAGCAAGCAAAGCCAGCAGGACAT...GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp GGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCCGTCTTCACATTCTaGCACCACACTGCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: GRLKDLQCINIHLAERKGAVFTF*HHTAEP
Trigger: GGGCTCGGCAGTGTGGTGCCAGAATGTGAAGACGGC...CCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACAAACATCAGACTTTGCTaGGACCTCGTGCTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTNIRLC*DLVLLN
Trigger: ATTAAGAAGCACGAGGTCCCAGCAAAGTCTGATGTT...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACATGGTTTCTGCCAAGATaGAATATTCCTCCTCCTAGT +
Preference number: 4 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTWFLPR*NIPPPS
Trigger: ACTAGGAGGAGGAATATTCCATCTTGGCAGAAACCA...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp GCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTGATGGCCTCCAGTTACATTCAGGCAGATaGCCCTCTTCCCACCCAAAC +
Preference number: 4 (lower is better)
Translates to: AHVRAQNKASTKRVDGLQLHSGR*PSSHPN
Trigger: GTTTGGGTGGGAAGAGGGCCATCTGCCTGAATGTAA...CTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGACCTGGCAACCAGAAGTaGACAGAAGCGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: HHQERHGKAKSQLNQGQRPGNQK*TEAWVP
Trigger: GGGCACCCACGCTTCTGTCCACTTCTGGTTGCCAGG...TCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR CAA 72 bp ATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTaGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCC +
Preference number: 4 (lower is better)
Translates to: MSGLRTRPQPRG*MASSQETVAHA
Trigger: GGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp GCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTGATGGCCTCCAGTATCACCAGCTGCGGTaGCAACGTCTTTGCATATGT +
Preference number: 4 (lower is better)
Translates to: AHVRAQNKASTKRVDGLQYHQLR*QRLCIC
Trigger: ACATATGCAAAGACGTTGTCACCGCAGCTGGTGATA...CTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGGTTCCAGGGCAGGGATaGCATTCTTGGAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: GKTRESQITVEPGTENPWVPGQG*HSWRPL
Trigger: AAGTGGCCTCCAAGAATGTCATCCCTGCCCTGGAAC...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR TCA 90 bp GTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCAAGCCAAATCACAGTTaGACCAGGGACAGAGAACCC +
Preference number: 4 (lower is better)
Translates to: VDGLQSRNCGSCQQSSLLKPNHS*TRDREP
Trigger: GGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTT...GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCTCTGCCGAGCCCCTGGTaGATTCTTTCAGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: PPVHQHPSSREKRGTEAALPSPW*ILSVQG
Trigger: TCCTTGGACTGAAAGAATGCACCAGGGGCTCGGCAG...AGCTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGACTCCAGCAGGCGCCATaGAAGGGCAGGCTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: HHQERHGKAKSQLNQGQRLQQAP*KGRLKD
Trigger: GTCTTTTAGCCTGCCCTTGCATGGCGCCTGCTGGAG...TCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp AGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCTTCCAAAATCCCTATaGTATTACAGTGGGAATTAC +
Preference number: 4 (lower is better)
Translates to: SVGAQVGHRQLPTPTPQHLPKSL*YYSGNY
Trigger: GTAATTCCCACTGTAATAGCATAGGGATTTTGGAAG...ATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CAGGCGCCATGCAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGATATAAATCTGCCCTaGCCCAAAGCCGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QAPCKGRLKDLQCINIHLDINLP*PKAVQS
Trigger: GCTCTGGACGGCTTTGGGGCAGGGCAGATTTATATC...TAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTGCATGGCGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000610929.3
CDS-3UTR CCA 90 bp CAGGCGCCATGCAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAACACTGCCGAGCCCCTaGTGCATTCTTTCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: QAPCKGRLKDLQCINIHLTLPSP*CILSVQ
Trigger: TTGGACTGAAAGAATGCACCAGGGGCTCGGCAGTGT...TAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTGCATGGCGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp TCAACCAAGAGGGTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGACACTGCCGAGCCCCTaGTGCATTCTTTCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: STKRVDGLQSRNCGSCQQTLPSP*CILSVQ
Trigger: TTGGACTGAAAGAATGCACCAGGGGCTCGGCAGTGT...CTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp GCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCATGTGCATCATCATCTaGATAGCAATTTCAGAATAC +
Preference number: 4 (lower is better)
Translates to: AAPQQPGTCRQHEQAQRGMCIII*IAISEY
Trigger: GTATTCTGAAATTGCTATCCAGATGATGATGCACAT...GCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp CAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAGTGTCCACCACCTCCTaGCACTCTTCCGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: QGQAKRPPVHQHPSSREKVSTTS*HSSDRD
Trigger: GTCCCTGTCGGAAGAGTGCCAGGAGGTGGTGGACAC...TTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp GTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCCAGGATCTCCTGCTTaGTGCTGTTTTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VDGLQSRNCGSCQQSSLLPGSPA*CCFSPG
Trigger: ACCTGGAGAAAAACAGCACCAAGCAGGAGATCCTGG...GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CAGGCGCCATGCAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTATCGACAGCATTGCACTaGGCTGCTGTCTCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: QAPCKGRLKDLQCINIHLSTALH*AAVSVF
Trigger: GAACACAGAGACAGCAGCCCAGTGCAATGCTGTCGA...TAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTGCATGGCGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
3UTR CAA 72 bp CATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTaGAACCAGGGACAGAGAACCCTTGGCCCCACTGAT +
Preference number: 4 (lower is better)
Translates to: HHQERHGKAKSQ*NQGQRTLGPTD
Trigger: ATCAGTGGGGCCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp CAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAGTACATAGCGCCGTCTaGCTCCGCAGTCTGCAATGC +
Preference number: 4 (lower is better)
Translates to: QGQAKRPPVHQHPSSREKVHSAV*LRSLQC
Trigger: GCATTGCAGACTGCGGAGTCAGACGGCGCTATGTAC...TTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp TCAACCAAGAGGGTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAAGCCAAATCACAGTTaGACCAGGGACAGAGAACCC +
Preference number: 4 (lower is better)
Translates to: STKRVDGLQSRNCGSCQQKPNHS*TRDREP
Trigger: GGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTT...CTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp CCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCTCAAAAGGAGCATCTATaGGACAAGGGAGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PPVHQHPSSREKRGTEAAQKEHL*DKGGVQ
Trigger: CTGCACCCCTCCCTTGTCTCATAGATGCTCCTTTTG...AGCTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGCAAAAGGAGCATCTATaGGACAAGGGAGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GKTRESQITVEPGTENPWQKEHL*DKGGVQ
Trigger: CTGCACCCCTCCCTTGTCTCATAGATGCTCCTTTTG...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CAGGCGCCATGCAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGGATCTCCTGCTTGGTaGTGTTTTTCTCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: QAPCKGRLKDLQCINIHLGSPAW*CFSPGC
Trigger: GCAACCTGGAGAAAAACAGCACCAAGCAGGAGATCC...TAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTGCATGGCGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp TCAACCAAGAGGGTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGGGATCTCCTGCTTGGTaGTGTTTTTCTCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: STKRVDGLQSRNCGSCQQGSPAW*CFSPGC
Trigger: GCAACCTGGAGAAAAACAGCACCAAGCAGGAGATCC...CTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGGCAGCCAGGATCTCCTaGTTGGTGCTGTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GKTRESQITVEPGTENPWAARIS*LVLFFS
Trigger: GGAGAAAAACAGCACCAAGCAGGAGATCCTGGCTGC...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAGGTCTGGCAGGAAGCTaGAGCCTTTCTCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: HHQERHGKAKSQLNQGQRGLAGS*SLSQEQ
Trigger: CTGCTCTTGAGAAAGGCTGCAGCTTCCTGCCAGACC...TCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGAATGCTCGACAGCATTaGACTGGGCTGCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GKTRESQITVEPGTENPWNARQH*TGLLSL
Trigger: CAGAGACAGCAGCCCAGTGCAATGCTGTCGAGCATT...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGTCTGCTAGGTGCTTCTaGAGAGACTCGCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GKTRESQITVEPGTENPWSARCF*RDSQRL
Trigger: CAACCTCTGCGAGTCTCTCCAGAAGCACCTAGCAGA...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp GACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGTGTTCCACCAAGGCCTaGACAAAGGTGGAGTTGGTC +
Preference number: 4 (lower is better)
Translates to: DLQCINIHLAERKGALKQCSTKA*TKVELV
Trigger: GACCAACTCCACCTTTGTCCAGGCCTTGGTGGAACA...CTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp CACACCCAGCAGACCCTTCGGCATGCCGCCCTCTACCAGGAAGCCAGAGGCCTAATGTGCATCATCATCTaGATAGCAATTTCAGAATAC +
Preference number: 4 (lower is better)
Translates to: HTQQTLRHAALYQEARGLMCIII*IAISEY
Trigger: GTATTCTGAAATTGCTATCCAGATGATGATGCACAT...TAGGCCTCTGGCTTCCTGGTAGAGGGCGGCATGCCGAAGGGTCTGCTGGGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp TCAACCAAGAGGGTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGCCAGGATCTCCTGCTTaGTGCTGTTTTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: STKRVDGLQSRNCGSCQQPGSPA*CCFSPG
Trigger: ACCTGGAGAAAAACAGCACCAAGCAGGAGATCCTGG...CTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CAGGCGCCATGCAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTACCAGGATCTCCTGCTTaGTGCTGTTTTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QAPCKGRLKDLQCINIHLPGSPA*CCFSPG
Trigger: ACCTGGAGAAAAACAGCACCAAGCAGGAGATCCTGG...TAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTGCATGGCGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCTTCGACAGCATTGCACTaGGCTGCTGTCTCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: PPVHQHPSSREKRGTEAASTALH*AAVSVF
Trigger: GAACACAGAGACAGCAGCCCAGTGCAATGCTGTCGA...AGCTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGATTGTTCCAAACGGTCTaGAGGCAGTGCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: HHQERHGKAKSQLNQGQRLFQTV*RQCFTA
Trigger: GGCAGTGAAGCACTGCCTGCAGACCGTTTGGAACAA...TCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCTCAGCATATCACCAGCTaGGGTGACAACGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PPVHQHPSSREKRGTEAAQHITS*GDNVFA
Trigger: TGCAAAGACGTTGTCACCGCAGCTGGTGATATGCTG...AGCTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGGGATCTCCTGCTTGGTaGTGTTTTTCTCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: DLQCINIHLAERKGALKQGSPAW*CFSPGC
Trigger: GCAACCTGGAGAAAAACAGCACCAAGCAGGAGATCC...CTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGTCCACACATGGCGTTTaGAATGCTCGACAGCATTGC +
Preference number: 4 (lower is better)
Translates to: GKTRESQITVEPGTENPWSTHGV*NARQHC
Trigger: GCAATGCTGTCGAGCATTGCAAACGCCATGTGTGGA...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTGCCTTTGTTTTGCTaGTTTGTTCAACTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VDGLQSRNCGSCQQSSLLLPLFC*FVQLRG
Trigger: GCCTCTCAGTTGAACAAAGCAGCAAAACAAAGGCAG...GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CAGGCGCCATGCAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAAGTCATGTCCAGCTCTaGGATCTTATTGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: QAPCKGRLKDLQCINIHLSHVQL*DLIGLQ
Trigger: CTGGAGTCCAATAAGATCCCAGAGCTGGACATGACT...TAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTGCATGGCGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp CAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGCCTGGACAAAGGTaGAGTTGGTCCGTACAGCAG +
Preference number: 4 (lower is better)
Translates to: QGQAKRPPVHQHPSSREKRPGQR*SWSVQQ
Trigger: CTGCTGTACGGACCAACTCCACCTTTGTCCAGGCCT...TTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp CATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGACTTCTGGTAAGGGTCTaGCAGGAAGCTGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: HHQERHGKAKSQLNQGQRLLVRV*QEAAAF
Trigger: AAAGGCTGCAGCTTCCTGCCAGACCCTTACCAGAAG...TCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGACTGGCACCAGTAGCTTaGGCCCCATATACACTTCTC +
Preference number: 4 (lower is better)
Translates to: HHQERHGKAKSQLNQGQRLAPVA*APYTLL
Trigger: GAGAAGTGTATATGGGGCCCAAGCTACTGGTGCCAG...TCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp GCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTGATGGCCTCCAGTGGTTTCTGCCAAGATaGAATATTCCTCCTCCTAGT +
Preference number: 4 (lower is better)
Translates to: AHVRAQNKASTKRVDGLQWFLPR*NIPPPS
Trigger: ACTAGGAGGAGGAATATTCCATCTTGGCAGAAACCA...CTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGTTACATTCAGGCAGATaGCCCTCTTCCCACCCAAAC +
Preference number: 4 (lower is better)
Translates to: GKTRESQITVEPGTENPWLHSGR*PSSHPN
Trigger: GTTTGGGTGGGAAGAGGGCCATCTGCCTGAATGTAA...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCTTTGCTTGCTGTCTCCTaGCAACCAGAAGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: PPVHQHPSSREKRGTEAALLAVS*QPEVDR
Trigger: TCTGTCCACTTCTGGTTGCCAGGAGACAGCAAGCAA...AGCTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR TCA 90 bp CAGGCGCCATGCAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTACACTATCTCCTTGCATaGAGCAGACATGTTCGGTTT +
Preference number: 4 (lower is better)
Translates to: QAPCKGRLKDLQCINIHLHYLLA*SRHVRF
Trigger: AAACCGAACATGTCTGCTTCATGCAAGGAGATAGTG...TAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTGCATGGCGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR TCA 90 bp GGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGATGTCAGTCACCATCTaGATGCAGTCCTGGCAAACG +
Preference number: 4 (lower is better)
Translates to: GRLKDLQCINIHLAERKGMSVTI*MQSWQT
Trigger: CGTTTGCCAGGACTGCATTCAGATGGTGACTGACAT...CCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR TCA 90 bp GGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGAAGCCAAATCACAGTTaGACCAGGGACAGAGAACCC +
Preference number: 4 (lower is better)
Translates to: GRLKDLQCINIHLAERKGKPNHS*TRDREP
Trigger: GGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTT...CCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAACAGTCACCATCTGAATaGAGTCCTGGCAAACGTCCC +
Preference number: 4 (lower is better)
Translates to: QGQAKRPPVHQHPSSREKQSPSE*SPGKRP
Trigger: GGGACGTTTGCCAGGACTGCATTCAGATGGTGACTG...TTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR GCA 90 bp CAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAACACGGGCTCGTACTCTaGCACAAACTGATCACACTG +
Preference number: 4 (lower is better)
Translates to: QGQAKRPPVHQHPSSREKHGLVL*HKLITL
Trigger: CAGTGTGATCAGTTTGTGGCAGAGTACGAGCCCGTG...TTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTCCAGCCTTCCAAAATCCCTATaGTATTACAGTGGGAATTAC +
Preference number: 4 (lower is better)
Translates to: ASSQETVAHASRALSSSSLPKSL*YYSGNY
Trigger: GTAATTCCCACTGTAATAGCATAGGGATTTTGGAAG...GCTGGAGGAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CAGGCGCCATGCAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAAAGGGATTTCACTGTTaGCTTGTTCCAAACGGTCTG +
Preference number: 4 (lower is better)
Translates to: QAPCKGRLKDLQCINIHLKGFHC*LVPNGL
Trigger: CAGACCGTTTGGAACAAGCCAACAGTGAAATCCCTT...TAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTGCATGGCGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp GTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCAACATCAGACTTTGCTaGGACCTCGTGCTTCTTAAT +
Preference number: 4 (lower is better)
Translates to: VDGLQSRNCGSCQQSSLLNIRLC*DLVLLN
Trigger: ATTAAGAAGCACGAGGTCCCAGCAAAGTCTGATGTT...GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp CAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAACCAGTCAAGAAACTGTaGCTCATGCCAGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: QGQAKRPPVHQHPSSREKPVKKL*LMPAEL
Trigger: GAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGG...TTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGATTACATTCAGGCAGATaGCCCTCTTCCCACCCAAAC +
Preference number: 4 (lower is better)
Translates to: HHQERHGKAKSQLNQGQRLHSGR*PSSHPN
Trigger: GTTTGGGTGGGAAGAGGGCCATCTGCCTGAATGTAA...TCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp GGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGTTGCTTGCTGTCTCCTaGCAACCAGAAGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: GRLKDLQCINIHLAERKGLLAVS*QPEVDR
Trigger: TCTGTCCACTTCTGGTTGCCAGGAGACAGCAAGCAA...CCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGAGTCCACTATCTCCTTaGATGAAGCAGACATGTTCG +
Preference number: 4 (lower is better)
Translates to: DLQCINIHLAERKGALKQSPLSP*MKQTCS
Trigger: CGAACATGTCTGCTTCATGCAAGGAGATAGTGGACT...CTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp CAGGCGCCATGCAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTATGGTTTCTGCCAAGATaGAATATTCCTCCTCCTAGT +
Preference number: 4 (lower is better)
Translates to: QAPCKGRLKDLQCINIHLWFLPR*NIPPPS
Trigger: ACTAGGAGGAGGAATATTCCATCTTGGCAGAAACCA...TAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTGCATGGCGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCTTCCAAAATCCCTATGCTATTACAGTGGGAATTACATCATTTAAAAAGCCTGACGGTCTGCAGGCAGTaGTTCACTGCCCCGCAGTCG +
Preference number: 4 (lower is better)
Translates to: ASKIPMLLQWELHHLKSLTVCRQ*FTAPQS
Trigger: CGACTGCGGGGCAGTGAAGCACTGCCTGCAGACCGT...CAGGCTTTTTAAATGATGTAATTCCCACTGTAATAGCATAGGGATTTTGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp CATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAAAGGGATTTCACTGTTaGCTTGTTCCAAACGGTCTG +
Preference number: 4 (lower is better)
Translates to: HHQERHGKAKSQLNQGQRKGFHC*LVPNGL
Trigger: CAGACCGTTTGGAACAAGCCAACAGTGAAATCCCTT...TCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp TTAGTGCAAAACAAAAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTGCTCACGTGAACGGTCAGTaGAGGCAGCCGCGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LVQNKNHEVHLIATSCPAHVNGQ*RQPRAR
Trigger: TCTGGCACGCGGCTGCCTGCACTGACCGTTCACGTG...AGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTTTTGTTTTGCACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp CAGGCGCCATGCAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTACTTCCAAAATCCCTATaGTATTACAGTGGGAATTAC +
Preference number: 4 (lower is better)
Translates to: QAPCKGRLKDLQCINIHLLPKSL*YYSGNY
Trigger: GTAATTCCCACTGTAATAGCATAGGGATTTTGGAAG...TAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTGCATGGCGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CCA 90 bp GCTTCCAAAATCCCTATGCTATTACAGTGGGAATTACATCATTTAAAAAGCCTGGTGTCCACCACCTCCTaGCACTCTTCCGACAGGGAC +
Preference number: 4 (lower is better)
Translates to: ASKIPMLLQWELHHLKSLVSTTS*HSSDRD
Trigger: GTCCCTGTCGGAAGAGTGCCAGGAGGTGGTGGACAC...CAGGCTTTTTAAATGATGTAATTCCCACTGTAATAGCATAGGGATTTTGGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR TCA 90 bp GCTTCCAAAATCCCTATGCTATTACAGTGGGAATTACATCATTTAAAAAGCCTGGTACATAGCGCCGTCTaGCTCCGCAGTCTGCAATGC +
Preference number: 4 (lower is better)
Translates to: ASKIPMLLQWELHHLKSLVHSAV*LRSLQC
Trigger: GCATTGCAGACTGCGGAGTCAGACGGCGCTATGTAC...CAGGCTTTTTAAATGATGTAATTCCCACTGTAATAGCATAGGGATTTTGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCTTCCAAAATCCCTATGCTATTACAGTGGGAATTACATCATTTAAAAAGCCTGGCGGGGACCAGAGTCTaGATGGGCATCTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: ASKIPMLLQWELHHLKSLAGTRV*MGISFT
Trigger: GGTGAAAGAGATGCCCATGCAGACTCTGGTCCCCGC...CAGGCTTTTTAAATGATGTAATTCCCACTGTAATAGCATAGGGATTTTGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR GCA 90 bp GCTTCCAAAATCCCTATGCTATTACAGTGGGAATTACATCATTTAAAAAGCCTGTGGACAGGATGGAGCTaGCGTACGTGTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: ASKIPMLLQWELHHLKSLWTGWS*RTCPPP
Trigger: AGGTGGTGGACACGTACGGCAGCTCCATCCTGTCCA...CAGGCTTTTTAAATGATGTAATTCCCACTGTAATAGCATAGGGATTTTGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CCA 90 bp GCTTCCAAAATCCCTATGCTATTACAGTGGGAATTACATCATTTAAAAAGCCTGGCAGGATGGACAGGATaGAGCTGCCGTACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: ASKIPMLLQWELHHLKSLAGWTG*SCRTCP
Trigger: TGGACACGTACGGCAGCTCCATCCTGTCCATCCTGC...CAGGCTTTTTAAATGATGTAATTCCCACTGTAATAGCATAGGGATTTTGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR GCA 90 bp GCTTCCAAAATCCCTATGCTATTACAGTGGGAATTACATCATTTAAAAAGCCTGAACCCACCAGCTTCTTaGACACTTCGCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ASKIPMLLQWELHHLKSLNPPAS*TLRRSH
Trigger: GTGGCTTCTGCGAAGTGTGCAAGAAGCTGGTGGGTT...CAGGCTTTTTAAATGATGTAATTCCCACTGTAATAGCATAGGGATTTTGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCTTCCAAAATCCCTATGCTATTACAGTGGGAATTACATCATTTAAAAAGCCTGAGAAACTGTGGCTCATaGCAGCAGAGCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ASKIPMLLQWELHHLKSLRNCGS*QQSSLL
Trigger: GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCT...CAGGCTTTTTAAATGATGTAATTCCCACTGTAATAGCATAGGGATTTTGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp GCTTCCAAAATCCCTATGCTATTACAGTGGGAATTACATCATTTAAAAAGCCTGGATATAAATCTGCCCTaGCCCAAAGCCGTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: ASKIPMLLQWELHHLKSLDINLP*PKAVQS
Trigger: GCTCTGGACGGCTTTGGGGCAGGGCAGATTTATATC...CAGGCTTTTTAAATGATGTAATTCCCACTGTAATAGCATAGGGATTTTGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000610929.3
CDS-3UTR GCA 90 bp TTAGTGCAAAACAAAAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTGCTTTGTTCCAAACGGTCTaGAGGCAGTGCTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: LVQNKNHEVHLIATSCPALFQTV*RQCFTA
Trigger: GGCAGTGAAGCACTGCCTGCAGACCGTTTGGAACAA...AGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTTTTGTTTTGCACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp TTAGTGCAAAACAAAAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTGCTATGTCCTGCTGGCTTTaGTTGCTGTCTCCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LVQNKNHEVHLIATSCPAMSCWL*LLSPGN
Trigger: GTTGCCAGGAGACAGCAAGCAAAGCCAGCAGGACAT...AGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTTTTGTTTTGCACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR GCA 90 bp TTAGTGCAAAACAAAAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTGCTCTGCCTTTGTTTTGCTaGTTTGTTCAACTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LVQNKNHEVHLIATSCPALPLFC*FVQLRG
Trigger: GCCTCTCAGTTGAACAAAGCAGCAAAACAAAGGCAG...AGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTTTTGTTTTGCACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS GCA 90 bp CGGACGCCGTCTTCACATTCTGGCACCACACTGCCGAGCCCCTGGTaGATTCTTTCAGTCCAAGGACCGGGCCGGCTAGAGCCGCGCCCA +
Preference number: 5 (lower is better)
Translates to: RTPSSHSGTTLPSPW*ILSVQGPGRLEPRP
Trigger: TGGGCGCGGCTCTAGCCGGCCCGGTCCTTGGACTGAAAGAATGCACCAGGGGCTCGGCAGTGTGGTGCCAGAATGTGAAGACGGCGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS GCA 90 bp CACTGCCCCGCAGTCGGACGCCGTCTTCACATTCTGGCACCACACTaGCGAGCCCCTGGTGCATTCTTTCAGTCCAAGGACCGGGCCGGC +
Preference number: 5 (lower is better)
Translates to: HCPAVGRRLHILAPH*RAPGAFFQSKDRAG
Trigger: GCCGGCCCGGTCCTTGGACTGAAAGAATGCACCAGGGGCTCGGCAGTGTGGTGCCAGAATGTGAAGACGGCGTCCGACTGCGGGGCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS CCA 90 bp AGTCGGACGCCGTCTTCACATTCTGGCACCACACTGCCGAGCCCCTaGTGCATTCTTTCAGTCCAAGGACCGGGCCGGCTAGAGCCGCGC +
Preference number: 5 (lower is better)
Translates to: SRTPSSHSGTTLPSP*CILSVQGPGRLEPR
Trigger: GCGCGGCTCTAGCCGGCCCGGTCCTTGGACTGAAAGAATGCACCAGGGGCTCGGCAGTGTGGTGCCAGAATGTGAAGACGGCGTCCGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp CCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACCGTCCCCATTATCCTTaGGCTGGGGCTTGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: PQQPGTCRQHEQAQRGHHRPHYP*AGACCG
Trigger: CCCGCAGCAAGCCCCAGCCAAAGGATAATGGGGACG...GTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp CGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCCGCAGGGATGACATTCTaGGAGGCCACTTTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RGCPSGPQTASNPHTPASAGMTF*EATLAG
Trigger: CCCCGCCAAAGTGGCCTCCAAGAATGTCATCCCTGC...GGATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp CGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGCCTTCGGAGAAGGGACAGAGAACCCTaGGCCCCACTGATGTCCCAA +
Preference number: 5 (lower is better)
Translates to: RPPLSTRSHKPGPQGLRRRDREP*APLMSQ
Trigger: TTGGGACATCAGTGGGGCCAAGGGTTCTCTGTCCCT...TCTCCGAAGGCCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCGCGGCTGGACAAAGGTGGAGTaGGTCCGTACAGCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: AAPQQPGTCRQHEQAQRGWTKVE*VRTAVW
Trigger: CCAGACTGCTGTACGGACCAACTCCACCTTTGTCCA...GCCGCGCTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp CGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATCCTGGACAAAGGTGGAGTaGGTCCGTACAGCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: RGCPSGPQTASNPHTPASWTKVE*VRTAVW
Trigger: CCAGACTGCTGTACGGACCAACTCCACCTTTGTCCA...GGATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACATTCTTGGAGGCCACTTaGGCGGGGACCAGAGTCTGC +
Preference number: 5 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTFLEAT*AGTRVC
Trigger: GCAGACTCTGGTCCCCGCCAAAGTGGCCTCCAAGAA...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp AGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATAGAAGCCACCGTCCTTaGGCTGAGTCACGTGAACGG +
Preference number: 5 (lower is better)
Translates to: SVGAQVGHRQLPTPTPQHRSHRP*AESRER
Trigger: CCGTTCACGTGACTCAGCCAAAGGACGGTGGCTTCT...ATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS GCA 90 bp GCCAGGAGGAAGAGGGCGTACATAGCGCCGTCTGACTCCGCAGTCTaGAATGCGGAGCGTCAGCTGATCCCCCGCAGATATAAATCTGCC +
Preference number: 5 (lower is better)
Translates to: ARRKRAYIAPSDSAV*NAERQLIPRRYKSA
Trigger: GGCAGATTTATATCTGCGGGGGATCAGCTGACGCTCCGCATTGCAGACTGCGGAGTCAGACGGCGCTATGTACGCCCTCTTCCTCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000610929.3
CDS-3UTR CAA 90 bp CGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGCCTTCGGAGAGAAGGGATTTCACTGTaGGCTTGTTCCAAACGGTCT +
Preference number: 5 (lower is better)
Translates to: RPPLSTRSHKPGPQGLRREGISL*ACSKRS
Trigger: AGACCGTTTGGAACAAGCCAACAGTGAAATCCCTTC...TCTCCGAAGGCCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GGCCCGCAGGGCCTTCGGAGAGCTAGCAGGTTACATTCAGGCAGATGGCCCTCTGCGGTGACAACGTCTTaGCATATGTCGCAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GPQGLRRASRLHSGRWPSAVTTS*HMSQGR
Trigger: CCTTCCCTGCGACATATGCAAAGACGTTGTCACCGC...AGAGGGCCATCTGCCTGAATGTAACCTGCTAGCTCTCCGAAGGCCCTGCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp CGGCCACCACTGTCCACACGCTCACACAAGCCAGGCCCGCAGGGCCTTCGGAGAAAAGCCAAATCACAGTaGAACCAGGGACAGAGAACC +
Preference number: 5 (lower is better)
Translates to: RPPLSTRSHKPGPQGLRRKAKSQ*NQGQRT
Trigger: GGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTT...TCTCCGAAGGCCCTGCGGGCCTGGCTTGTGTGAGCGTGTGGACAGTGGTGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS TCA 90 bp TGCATATGTCGGCCATGCCAGGGCCCAGGCGGTCACACTCCTCCTTaGCATGTTCCACCAAGGCCTGGACAAAGGTGGAGTTGGTCCGTA +
Preference number: 5 (lower is better)
Translates to: CICRPCQGPGGHTPP*HVPPRPGQRWSWSV
Trigger: TACGGACCAACTCCACCTTTGTCCAGGCCTTGGTGGAACATGTCAAGGAGGAGTGTGACCGCCTGGGCCCTGGCATGGCCGACATATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000633965.1
CDS CCA 90 bp GGGCCCAGGCGGTCACACTCCTCCTTGACATGTTCCACCAAGGCCTaGACAAAGGTGGAGTTGGTCCGTACAGCAGTCTGGATGTCAGTC +
Preference number: 5 (lower is better)
Translates to: GPRRSHSSLTCSTKA*TKVELVRTAVWMSV
Trigger: GACTGACATCCAGACTGCTGTACGGACCAACTCCACCTTTGTCCAGGCCTTGGTGGAACATGTCAAGGAGGAGTGTGACCGCCTGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000633965.1
CDS-3UTR CAA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGGCGGTGACAACGTCTTaGCATATGTCGCAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQAVTTS*HMSQGR
Trigger: CCTTCCCTGCGACATATGCAAAGACGTTGTCACCGC...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GGCCCGCAGGGCCTTCGGAGAGCTAGCAGGTTACATTCAGGCAGATGGCCCTCTAGCGCACAGATCTCCTaGGGTTGCATGTGCATCATC +
Preference number: 5 (lower is better)
Translates to: GPQGLRRASRLHSGRWPSSAQIS*GCMCII
Trigger: GATGATGCACATGCAACCCAAGGAGATCTGTGCGCT...AGAGGGCCATCTGCCTGAATGTAACCTGCTAGCTCTCCGAAGGCCCTGCGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394936.8
CDS-3UTR CAA 90 bp GCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTCCAGCAGAAGCCACCGTCCTTaGGCTGAGTCACGTGAACGG +
Preference number: 5 (lower is better)
Translates to: ASSQETVAHASRALSSSSRSHRP*AESRER
Trigger: CCGTTCACGTGACTCAGCCAAAGGACGGTGGCTTCT...GCTGGAGGAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGCAATGCTCGACAGCATaGCACTGGGCTGCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQQCSTA*HWAAVS
Trigger: AGAGACAGCAGCCCAGTGCAATGCTGTCGAGCATTG...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS GCA 90 bp TTTCACTGTTGGCTTGTTCCAAACGGTCTGCAGGCAGTGCTTCACTaGCCCGCAGTCGGACGCCGTCTTCACATTCTGGCACCACACTGC +
Preference number: 5 (lower is better)
Translates to: FHCWLVPNGLQAVLH*PAVGRRLHILAPHC
Trigger: GCAGTGTGGTGCCAGAATGTGAAGACGGCGTCCGACTGCGGGGCAGTGAAGCACTGCCTGCAGACCGTTTGGAACAAGCCAACAGTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS GCA 90 bp GGAAGGGATTTCACTGTTGGCTTGTTCCAAACGGTCTGCAGGCAGTaGTTCACTGCCCCGCAGTCGGACGCCGTCTTCACATTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: GRDFTVGLFQTVCRQ*FTAPQSDAVFTFWH
Trigger: GTGCCAGAATGTGAAGACGGCGTCCGACTGCGGGGCAGTGAAGCACTGCCTGCAGACCGTTTGGAACAAGCCAACAGTGAAATCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS GCA 90 bp ATGTCGCAGGGAAGGGATTTCACTGTTGGCTTGTTCCAAACGGTCTaGAGGCAGTGCTTCACTGCCCCGCAGTCGGACGCCGTCTTCACA +
Preference number: 5 (lower is better)
Translates to: MSQGRDFTVGLFQTV*RQCFTAPQSDAVFT
Trigger: TGTGAAGACGGCGTCCGACTGCGGGGCAGTGAAGCACTGCCTGCAGACCGTTTGGAACAAGCCAACAGTGAAATCCCTTCCCTGCGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GGCCCGCAGGGCCTTCGGAGAGCTAGCAGGTTACATTCAGGCAGATGGCCCTCTTCCTCCTCAGTGGCATaGTCCTTCAGCATATCACCA +
Preference number: 5 (lower is better)
Translates to: GPQGLRRASRLHSGRWPSSSSVA*SFSISP
Trigger: TGGTGATATGCTGAAGGACAATGCCACTGAGGAGGA...AGAGGGCCATCTGCCTGAATGTAACCTGCTAGCTCTCCGAAGGCCCTGCGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp AGCGTGGGTGCCCAAGTGGGCCACAGACAGCTTCCAACCCCCACACCCCAGCATGAGTCCACTATCTCCTaGCATGAAGCAGACATGTTC +
Preference number: 5 (lower is better)
Translates to: SVGAQVGHRQLPTPTPQHESTIS*HEADMF
Trigger: GAACATGTCTGCTTCATGCAAGGAGATAGTGGACTC...ATGCTGGGGTGTGGGGGTTGGAAGCTGTCTGTGGCCCACTTGGGCACCCACGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCGCAGGGATGACATTCTaGGAGGCCACTTTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: VDGLQSRNCGSCQQSSLLAGMTF*EATLAG
Trigger: CCCCGCCAAAGTGGCCTCCAAGAATGTCATCCCTGC...GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS GCA 90 bp GCAGGGATGACATTCTTGGAGGCCACTTTGGCGGGGACCAGAGTCTaGATGGGCATCTCTTTCACCTCATCACAGAACCCAACCAGCGCA +
Preference number: 5 (lower is better)
Translates to: AGMTFLEATLAGTRV*MGISFTSSQNPTSA
Trigger: TGCGCTGGTTGGGTTCTGTGATGAGGTGAAAGAGATGCCCATGCAGACTCTGGTCCCCGCCAAAGTGGCCTCCAAGAATGTCATCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000493143.1
ENST00000633965.1
CDS-3UTR CAA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGGATTTCACTGTTGGCTaGTTCCAAACGGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQDFTVG*FQTVCR
Trigger: CCTGCAGACCGTTTGGAACAAGCCAACAGTGAAATC...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGTCCTCCTCAGTGGCATaGTCCTTCAGCATATCACCA +
Preference number: 5 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQSSSVA*SFSISP
Trigger: TGGTGATATGCTGAAGGACAATGCCACTGAGGAGGA...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GGCCCGCAGGGCCTTCGGAGAGCTAGCAGGTTACATTCAGGCAGATGGCCCTCTAAAGCCAAATCACAGTaGAACCAGGGACAGAGAACC +
Preference number: 5 (lower is better)
Translates to: GPQGLRRASRLHSGRWPSKAKSQ*NQGQRT
Trigger: GGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTT...AGAGGGCCATCTGCCTGAATGTAACCTGCTAGCTCTCCGAAGGCCCTGCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS TCA 90 bp ACCTCATCACAGAACCCAACCAGCGCACAGATCTCCTTGGGTTGCTaGAGAGAGCACAGAACAACCAGTCAGCAGCAAGCCTACGCCCAC +
Preference number: 5 (lower is better)
Translates to: TSSQNPTSAQISLGC*REHRTTSQQQAYAH
Trigger: GTGGGCGTAGGCTTGCTGCTGACTGGTTGTTCTGTGCTCTCTTCAGCAACCCAAGGAGATCTGTGCGCTGGTTGGGTTCTGTGATGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493143.1
CDS CCA 90 bp GATGTTGGCCATGAAGGGGGCCACCACCTCAGTCATGTCCAGCTCTaGGATCTTATTGGACTCCAGCTGCTTCTGGTGATTCAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: DVGHEGGHHLSHVQL*DLIGLQLLLVIQLC
Trigger: GCAGAGCTGAATCACCAGAAGCAGCTGGAGTCCAATAAGATCCCAGAGCTGGACATGACTGAGGTGGTGGCCCCCTTCATGGCCAACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GCTGAAGCAGCGCCTCAACAGCCAGGGACATGTAGGCAACACGAGCAGGCACAGACAGATCTCCTTGGGTaGCTGAAGAGACATGTGCAT +
Preference number: 5 (lower is better)
Translates to: AEAAPQQPGTCRQHEQAQTDLLG*LKRHVH
Trigger: ATGCACATGTCTCTTCAGCAACCCAAGGAGATCTGT...CTGTGCCTGCTCGTGTTGCCTACATGTCCCTGGCTGTTGAGGCGCTGCTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394934.4
CDS TCA 90 bp AAGGTGGAGTTGGTCCGTACAGCAGTCTGGATGTCAGTCACCATCTaGATGCAGTCCTGGCAAACGTCCCCATTATCCTTTGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: KVELVRTAVWMSVTI*MQSWQTSPLSFGWG
Trigger: GCCCCAGCCAAAGGATAATGGGGACGTTTGCCAGGACTGCATTCAGATGGTGACTGACATCCAGACTGCTGTACGGACCAACTCCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS TCA 90 bp TCCACCAGGATCTCGATCAGCACGGGCTCGTACTCTGCCACAAACTaGTCACACTATAAAGGAAAGTGGGGACACAGGTCCAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: STRISISTGSYSATN*SHYKGKWGHRSSSG
Trigger: CCCAGAGCTGGACCTGTGTCCCCACTTTCCTTTATAGTGTGATCAGTTTGTGGCAGAGTACGAGCCCGTGCTGATCGAGATCCTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495196.1
CDS GCA 90 bp TGGAGTTGGTCCGTACAGCAGTCTGGATGTCAGTCACCATCTGAATaGAGTCCTGGCAAACGTCCCCATTATCCTTTGGCTGGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: WSWSVQQSGCQSPSE*SPGKRPHYPLAGAC
Trigger: GCAAGCCCCAGCCAAAGGATAATGGGGACGTTTGCCAGGACTGCATTCAGATGGTGACTGACATCCAGACTGCTGTACGGACCAACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS GCA 90 bp CCACAAACTGATCACACTGCTTCTGGTAAGGGTCTGGCAGGAAGCTaGAGCCTTTCTCAAGAGCAGCCAGGATCTCCTGCTTGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: PQTDHTASGKGLAGS*SLSQEQPGSPAWCC
Trigger: ACAGCACCAAGCAGGAGATCCTGGCTGCTCTTGAGAAAGGCTGCAGCTTCCTGCCAGACCCTTACCAGAAGCAGTGTGATCAGTTTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS CCA 90 bp AGCATTGCACTGGGCTGCTGTCTCTGTGTTCTGGCACCAGTAGCTTaGGCCCCATATACACTTCTCAGTTCCCAACAAGGGCTTATGGGC +
Preference number: 5 (lower is better)
Translates to: SIALGCCLCVLAPVA*APYTLLSSQQGLMG
Trigger: GCCCATAAGCCCTTGTTGGGAACTGAGAAGTGTATATGGGGCCCAAGCTACTGGTGCCAGAACACAGAGACAGCAGCCCAGTGCAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCCTCCAGCAGTAAACATCAGACTTaGCTGGGACCTCGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: ASSQETVAHASRALSSSSSKHQT*LGPRAS
Trigger: AGAAGCACGAGGTCCCAGCAAAGTCTGATGTTTACT...GCTGGAGGAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTGATGGCCTCCAGTTGTTGTCAATCAGCTaGGTCACCTCCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: AHVRAQNKASTKRVDGLQLLSIS*VTSFTR
Trigger: CCTGGTGAAGGAGGTGACCAAGCTGATTGACAACAA...CTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGAGAAGCCACCGTCCTTaGGCTGAGTCACGTGAACGG +
Preference number: 5 (lower is better)
Translates to: DLQCINIHLAERKGALKQRSHRP*AESRER
Trigger: CCGTTCACGTGACTCAGCCAAAGGACGGTGGCTTCT...CTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp CCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCTGGGCTAGGGGCTCCCTaGCAGACAGCAATGCTACAA +
Preference number: 5 (lower is better)
Translates to: PPVHQHPSSREKRGTEAAGLGAP*QTAMLQ
Trigger: TTGTAGCATTGCTGTCTGCAAGGGAGCCCCTAGCCC...AGCTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGGGGCTAGGGGCTCCCTaGCAGACAGCAATGCTACAA +
Preference number: 5 (lower is better)
Translates to: GKTRESQITVEPGTENPWGLGAP*QTAMLQ
Trigger: TTGTAGCATTGCTGTCTGCAAGGGAGCCCCTAGCCC...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGAGGGACAGAGAACCCTaGGCCCCACTGATGTCCCAA +
Preference number: 5 (lower is better)
Translates to: GKTRESQITVEPGTENPWRDREP*APLMSQ
Trigger: TTGGGACATCAGTGGGGCCAAGGGTTCTCTGTCCCT...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS TCA 90 bp GTCATGTCCAGCTCTGGGATCTTATTGGACTCCAGCTGCTTCTGGTaGTTCAGCTCTGCTAGGTGCTTCTGGAGAGACTCGCAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: VMSSSGILLDSSCFW*FSSARCFWRDSQRL
Trigger: CAACCTCTGCGAGTCTCTCCAGAAGCACCTAGCAGAGCTGAATCACCAGAAGCAGCTGGAGTCCAATAAGATCCCAGAGCTGGACATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCGATTTCACTGTTGGCTaGTTCCAAACGGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: VDGLQSRNCGSCQQSSLLDFTVG*FQTVCR
Trigger: CCTGCAGACCGTTTGGAACAAGCCAACAGTGAAATC...GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCAATGCTCGACAGCATaGCACTGGGCTGCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: DLQCINIHLAERKGALKQQCSTA*HWAAVS
Trigger: AGAGACAGCAGCCCAGTGCAATGCTGTCGAGCATTG...CTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp TCAACCAAGAGGGTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGCCTCAACCAAGAGGGTaGATGGCCTCCAGTCAAGAA +
Preference number: 5 (lower is better)
Translates to: STKRVDGLQSRNCGSCQQPQPRG*MASSQE
Trigger: TTCTTGACTGGAGGCCATCAACCCTCTTGGTTGAGG...CTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAACCCTCTTGGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTGATGGCCTCCAGAAAGCCAAATCACAGTaGAACCAGGGACAGAGAACC +
Preference number: 5 (lower is better)
Translates to: AHVRAQNKASTKRVDGLQKAKSQ*NQGQRT
Trigger: GGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTT...CTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS TCA 90 bp GATGTCCAGGATGACAGGGAGGTAGGAGTCCACTATCTCCTTGCATaGAGCAGACATGTTCGGTTTCGGAAGCCAGTCACAGGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: DVQDDREVGVHYLLA*SRHVRFRKPVTGLL
Trigger: GAGAAGACCTGTGACTGGCTTCCGAAACCGAACATGTCTGCTTCATGCAAGGAGATAGTGGACTCCTACCTCCCTGTCATCCTGGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS GCA 90 bp GGAAGCTGCAGCCTTTCTCAAGAGCAGCCAGGATCTCCTGCTTGGTaGTGTTTTTCTCCAGGTTGCGATCCAAATAACCCACCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GSCSLSQEQPGSPAW*CFSPGCDPNNPPAS
Trigger: AGAAGCTGGTGGGTTATTTGGATCGCAACCTGGAGAAAAACAGCACCAAGCAGGAGATCCTGGCTGCTCTTGAGAAAGGCTGCAGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS CCA 90 bp TCTCTTTCACCTCATCACAGAACCCAACCAGCGCACAGATCTCCTTaGGTTGCTGAAGAGAGCACAGAACAACCAGTCAGCAGCAAGCCT +
Preference number: 5 (lower is better)
Translates to: SLSPHHRTQPAHRSP*VAEESTEQPVSSKP
Trigger: AGGCTTGCTGCTGACTGGTTGTTCTGTGCTCTCTTCAGCAACCCAAGGAGATCTGTGCGCTGGTTGGGTTCTGTGATGAGGTGAAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493143.1
CDS-3UTR CAA 90 bp CATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAGCGGTGACAACGTCTTaGCATATGTCGCAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: HHQERHGKAKSQLNQGQRAVTTS*HMSQGR
Trigger: CCTTCCCTGCGACATATGCAAAGACGTTGTCACCGC...TCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GTTGATGGCCTCCAGTCAAGAAACTGTGGCTCATGCCAGCAGAGCTCTCTCCTCACAGATCTCCTTGGGTaGCATGTGCATCATCATCTG +
Preference number: 5 (lower is better)
Translates to: VDGLQSRNCGSCQQSSLLTDLLG*HVHHHL
Trigger: CAGATGATGATGCACATGCAACCCAAGGAGATCTGT...GAGGAGAGAGCTCTGCTGGCATGAGCCACAGTTTCTTGACTGGAGGCCATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394936.8
CDS-3UTR CAA 90 bp CATGTAGGCAACACGAGCAGGCACAGCGCGGCCACCACTGTCCACACGCTCACAATTTCTTTCTCAGTCTaGTTGTTGTCAATCAGCTTG +
Preference number: 5 (lower is better)
Translates to: HVGNTSRHSAATTVHTLTISFSV*LLSISL
Trigger: CAAGCTGATTGACAACAACAAGACTGAGAAAGAAAT...TGTGAGCGTGTGGACAGTGGTGGCCGCGCTGTGCCTGCTCGTGTTGCCTACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGCAATGCTCGACAGCATaGCACTGGGCTGCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: GRLKDLQCINIHLAERKGQCSTA*HWAAVS
Trigger: AGAGACAGCAGCCCAGTGCAATGCTGTCGAGCATTG...CCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp CCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCTCCTCAACCAAGAGGGTaGATGGCCTCCAGTCAAGAA +
Preference number: 5 (lower is better)
Translates to: PPVHQHPSSREKRGTEAAPQPRG*MASSQE
Trigger: TTCTTGACTGGAGGCCATCAACCCTCTTGGTTGAGG...AGCTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp CAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGACAGAGAACCCTaGGCCCCACTGATGTCCCAA +
Preference number: 5 (lower is better)
Translates to: QGQAKRPPVHQHPSSREKRDREP*APLMSQ
Trigger: TTGGGACATCAGTGGGGCCAAGGGTTCTCTGTCCCT...TTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS TCA 90 bp TCTCCTCCTCAGTGGCATTGTCCTTCAGCATATCACCAGCTGCGGTaGCAACGTCTTTGCATATGTCGCAGGGAAGGGATTTCACTGTTG +
Preference number: 5 (lower is better)
Translates to: SPPQWHCPSAYHQLR*QRLCICRREGISLL
Trigger: CAACAGTGAAATCCCTTCCCTGCGACATATGCAAAGACGTTGTCACCGCAGCTGGTGATATGCTGAAGGACAATGCCACTGAGGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS GCA 90 bp AAGGATCTCCTCCTCAGTGGCATTGTCCTTCAGCATATCACCAGCTaGGGTGACAACGTCTTTGCATATGTCGCAGGGAAGGGATTTCAC +
Preference number: 5 (lower is better)
Translates to: KDLLLSGIVLQHITS*GDNVFAYVAGKGFH
Trigger: GTGAAATCCCTTCCCTGCGACATATGCAAAGACGTTGTCACCGCAGCTGGTGATATGCTGAAGGACAATGCCACTGAGGAGGAGATCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS GCA 90 bp TGCTGTTTTTCTCCAGGTTGCGATCCAAATAACCCACCAGCTTCTTaGACACTTCGCAGAAGCCACCGTCCTTTGGCTGAGTCACGTGAA +
Preference number: 5 (lower is better)
Translates to: CCFSPGCDPNNPPAS*TLRRSHRPLAESRE
Trigger: TTCACGTGACTCAGCCAAAGGACGGTGGCTTCTGCGAAGTGTGCAAGAAGCTGGTGGGTTATTTGGATCGCAACCTGGAGAAAAACAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp CAGGCGCCATGCAAGGGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGAAGGGATTTCACTGTaGGCTTGTTCCAAACGGTCT +
Preference number: 5 (lower is better)
Translates to: QAPCKGRLKDLQCINIHLEGISL*ACSKRS
Trigger: AGACCGTTTGGAACAAGCCAACAGTGAAATCCCTTC...TAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCCCTTGCATGGCGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGTCCTCCTCAGTGGCATaGTCCTTCAGCATATCACCA +
Preference number: 5 (lower is better)
Translates to: GKTRESQITVEPGTENPWSSSVA*SFSISP
Trigger: TGGTGATATGCTGAAGGACAATGCCACTGAGGAGGA...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGTTGTTGTCAATCAGCTaGGTCACCTCCTTCACCAGG +
Preference number: 5 (lower is better)
Translates to: GKTRESQITVEPGTENPWLLSIS*VTSFTR
Trigger: CCTGGTGAAGGAGGTGACCAAGCTGATTGACAACAA...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGTTCCACACATGGCGTTaGCAATGCTCGACAGCATTG +
Preference number: 5 (lower is better)
Translates to: DLQCINIHLAERKGALKQFHTWR*QCSTAL
Trigger: CAATGCTGTCGAGCATTGCAAACGCCATGTGTGGAA...CTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp CCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCTTTCCACACATGGCGTTaGCAATGCTCGACAGCATTG +
Preference number: 5 (lower is better)
Translates to: PPVHQHPSSREKRGTEAAFHTWR*QCSTAL
Trigger: CAATGCTGTCGAGCATTGCAAACGCCATGTGTGGAA...AGCTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp CATCACCAGGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGACCTCAACCAAGAGGGTaGATGGCCTCCAGTCAAGAA +
Preference number: 5 (lower is better)
Translates to: HHQERHGKAKSQLNQGQRPQPRG*MASSQE
Trigger: TTCTTGACTGGAGGCCATCAACCCTCTTGGTTGAGG...TCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCCTGGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGGAAGGGATTTCACTGTaGGCTTGTTCCAAACGGTCT +
Preference number: 5 (lower is better)
Translates to: GKTRESQITVEPGTENPWEGISL*ACSKRS
Trigger: AGACCGTTTGGAACAAGCCAACAGTGAAATCCCTTC...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp CCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGGCACTGAAGCAGCTGAGTCCACTATCTCCTaGCATGAAGCAGACATGTTC +
Preference number: 5 (lower is better)
Translates to: PPVHQHPSSREKRGTEAAESTIS*HEADMF
Trigger: GAACATGTCTGCTTCATGCAAGGAGATAGTGGACTC...AGCTGCTTCAGTGCCCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGAGTAAACATCAGACTTaGCTGGGACCTCGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: GRLKDLQCINIHLAERKGSKHQT*LGPRAS
Trigger: AGAAGCACGAGGTCCCAGCAAAGTCTGATGTTTACT...CCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GGAAAGACACGGGAAAGCCAAATCACAGTTGAACCAGGGACAGAGAACCCTTGGTTCTCAGTCTTGTTGTaGTCAATCAGCTTGGTCACC +
Preference number: 5 (lower is better)
Translates to: GKTRESQITVEPGTENPWFSVLL*SISLVT
Trigger: GGTGACCAAGCTGATTGACAACAACAAGACTGAGAA...CCAAGGGTTCTCTGTCCCTGGTTCAACTGTGATTTGGCTTTCCCGTGTCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GCACATGTCAGGGCTCAGAACAAGGCCTCAACCAAGAGGGTTGATGGCCTCCAGATTTCTTTCTCAGTCTaGTTGTTGTCAATCAGCTTG +
Preference number: 5 (lower is better)
Translates to: AHVRAQNKASTKRVDGLQISFSV*LLSISL
Trigger: CAAGCTGATTGACAACAACAAGACTGAGAAAGAAAT...CTGGAGGCCATCAACCCTCTTGGTTGAGGCCTTGTTCTGAGCCCTGACATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GCTTCCAAAATCCCTATGCTATTACAGTGGGAATTACATCATTTAAAAAGCCTGAGGAGGAGAGGGATGTaGGCCATGAAGGGGGCCACC +
Preference number: 5 (lower is better)
Translates to: ASKIPMLLQWELHHLKSLRRRGM*AMKGAT
Trigger: GGTGGCCCCCTTCATGGCCAACATCCCTCTCCTCCT...CAGGCTTTTTAAATGATGTAATTCCCACTGTAATAGCATAGGGATTTTGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GCTTCCAAAATCCCTATGCTATTACAGTGGGAATTACATCATTTAAAAAGCCTGCGTCCCCATTATCCTTaGGCTGGGGCTTGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: ASKIPMLLQWELHHLKSLRPHYP*AGACCG
Trigger: CCCGCAGCAAGCCCCAGCCAAAGGATAATGGGGACG...CAGGCTTTTTAAATGATGTAATTCCCACTGTAATAGCATAGGGATTTTGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp TTAGTGCAAAACAAAAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTGCTAGGAGGAGAGGGATGTaGGCCATGAAGGGGGCCACC +
Preference number: 5 (lower is better)
Translates to: LVQNKNHEVHLIATSCPARRRGM*AMKGAT
Trigger: GGTGGCCCCCTTCATGGCCAACATCCCTCTCCTCCT...AGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTTTTGTTTTGCACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GCTTCCAAAATCCCTATGCTATTACAGTGGGAATTACATCATTTAAAAAGCCTGTTCTTGGAGGCCACTTaGGCGGGGACCAGAGTCTGC +
Preference number: 5 (lower is better)
Translates to: ASKIPMLLQWELHHLKSLFLEAT*AGTRVC
Trigger: GCAGACTCTGGTCCCCGCCAAAGTGGCCTCCAAGAA...CAGGCTTTTTAAATGATGTAATTCCCACTGTAATAGCATAGGGATTTTGGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GGCAGGCTAAAAGACCTCCAGTGCATCAACATCCATCTAGCAGAGAGAAAAGGGAGCTTCGAGCACATTTaGTCAAAAGCGTCGAGTATT +
Preference number: 5 (lower is better)
Translates to: GRLKDLQCINIHLAERKGSFEHI*SKASSI
Trigger: AATACTCGACGCTTTTGACAAAATGTGCTCGAAGCT...CCCTTTTCTCTCTGCTAGATGGATGTTGATGCACTGGAGGTCTTTTAGCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp GCTTCCAAAATCCCTATGCTATTACAGTGGGAATTACATCATTTAAAAAGCCTGCGGTCACACTCCTCCTaGACATGTTCCACCAAGGCC +
Preference number: 5 (lower is better)
Translates to: ASKIPMLLQWELHHLKSLRSHSS*TCSTKA
Trigger: GGCCTTGGTGGAACATGTCAAGGAGGAGTGTGACCG...CAGGCTTTTTAAATGATGTAATTCCCACTGTAATAGCATAGGGATTTTGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp TTAGTGCAAAACAAAAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTGCTCGGTCACACTCCTCCTaGACATGTTCCACCAAGGCC +
Preference number: 5 (lower is better)
Translates to: LVQNKNHEVHLIATSCPARSHSS*TCSTKA
Trigger: GGCCTTGGTGGAACATGTCAAGGAGGAGTGTGACCG...AGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTTTTGTTTTGCACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS CCA 90 bp AAGCGTCGAGTATTTCTTTCTCAGTCTTGTTGTTGTCAATCAGCTTaGTCACCTCCTTCACCAGGAATTCACACACCTCACAGTAAACAT +
Preference number: 5 (lower is better)
Translates to: KRRVFLSQSCCCQSA*SPPSPGIHTPHSKH
Trigger: ATGTTTACTGTGAGGTGTGTGAATTCCTGGTGAAGGAGGTGACCAAGCTGATTGACAACAACAAGACTGAGAAAGAAATACTCGACGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000493143.1
ENST00000633965.1
CDS-3UTR CAA 90 bp TTAGTGCAAAACAAAAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTGCTTTCCACACATGGCGTTaGCAATGCTCGACAGCATTG +
Preference number: 5 (lower is better)
Translates to: LVQNKNHEVHLIATSCPAFHTWR*QCSTAL
Trigger: CAATGCTGTCGAGCATTGCAAACGCCATGTGTGGAA...AGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTTTTGTTTTGCACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS-3UTR CAA 90 bp TTAGTGCAAAACAAAAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTGCTTTCTCAGTCTTGTTGTaGTCAATCAGCTTGGTCACC +
Preference number: 5 (lower is better)
Translates to: LVQNKNHEVHLIATSCPAFSVLL*SISLVT
Trigger: GGTGACCAAGCTGATTGACAACAACAAGACTGAGAA...AGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTTTTGTTTTGCACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS-3UTR CAA 90 bp TTAGTGCAAAACAAAAATCACGAAGTCCATTTAATAGCAACTTCATGTCCTGCTAGCTTCGAGCACATTTaGTCAAAAGCGTCGAGTATT +
Preference number: 5 (lower is better)
Translates to: LVQNKNHEVHLIATSCPASFEHI*SKASSI
Trigger: AATACTCGACGCTTTTGACAAAATGTGCTCGAAGCT...AGCAGGACATGAAGTTGCTATTAAATGGACTTCGTGATTTTTGTTTTGCACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS TCA 72 bp CGGCCATGCCAGGGCCCAGGCGGTCACACTCCTCCTTaGCATGTTCCACCAAGGCCTGGACAAAGGTGGAGT +
Preference number: 6 (lower is better)
Translates to: RPCQGPGGHTPP*HVPPRPGQRWS
Trigger: ACTCCACCTTTGTCCAGGCCTTGGTGGAACATGTCAAGGAGGAGTGTGACCGCCTGGGCCCTGGCATGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000633965.1
CDS TCA 72 bp GCTGGCCAGGAGGAAGAGGGCGTACATAGCGCCGTCTaGCTCCGCAGTCTGCAATGCGGAGCGTCAGCTGAT +
Preference number: 6 (lower is better)
Translates to: AGQEEEGVHSAV*LRSLQCGASAD
Trigger: ATCAGCTGACGCTCCGCATTGCAGACTGCGGAGTCAGACGGCGCTATGTACGCCCTCTTCCTCCTGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000610929.3
CDS CAA 72 bp TCGGCCATGCCAGGGCCCAGGCGGTCACACTCCTCCTaGACATGTTCCACCAAGGCCTGGACAAAGGTGGAG +
Preference number: 6 (lower is better)
Translates to: SAMPGPRRSHSS*TCSTKAWTKVE
Trigger: CTCCACCTTTGTCCAGGCCTTGGTGGAACATGTCAAGGAGGAGTGTGACCGCCTGGGCCCTGGCATGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000633965.1
CDS CCA 72 bp CCGTCTTCACATTCTGGCACCACACTGCCGAGCCCCTaGTGCATTCTTTCAGTCCAAGGACCGGGCCGGCTA +
Preference number: 6 (lower is better)
Translates to: PSSHSGTTLPSP*CILSVQGPGRL
Trigger: TAGCCGGCCCGGTCCTTGGACTGAAAGAATGCACCAGGGGCTCGGCAGTGTGGTGCCAGAATGTGAAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS CCA 72 bp CCGAGCATAGTGGGGCACAAAAGGCCAGGCAGGCCCTaGATACACTGTTCCCTGAGAGCTCCTGGCATTCCC +
Preference number: 6 (lower is better)
Translates to: PSIVGHKRPGRP*IHCSLRAPGIP
Trigger: GGGAATGCCAGGAGCTCTCAGGGAACAGTGTATCCAGGGCCTGCCTGGCCTTTTGTGCCCCACTATGCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495196.1
CDS GCA 72 bp TCTTCACATTCTGGCACCACACTGCCGAGCCCCTGGTaGATTCTTTCAGTCCAAGGACCGGGCCGGCTAGAG +
Preference number: 6 (lower is better)
Translates to: SSHSGTTLPSPW*ILSVQGPGRLE
Trigger: CTCTAGCCGGCCCGGTCCTTGGACTGAAAGAATGCACCAGGGGCTCGGCAGTGTGGTGCCAGAATGTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS GCA 72 bp TGGCTTGTTCCAAACGGTCTGCAGGCAGTGCTTCACTaGCCCGCAGTCGGACGCCGTCTTCACATTCTGGCA +
Preference number: 6 (lower is better)
Translates to: WLVPNGLQAVLH*PAVGRRLHILA
Trigger: TGCCAGAATGTGAAGACGGCGTCCGACTGCGGGGCAGTGAAGCACTGCCTGCAGACCGTTTGGAACAAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS GCA 72 bp GGAAGGGATTTCACTGTTGGCTTGTTCCAAACGGTCTaGAGGCAGTGCTTCACTGCCCCGCAGTCGGACGCC +
Preference number: 6 (lower is better)
Translates to: GRDFTVGLFQTV*RQCFTAPQSDA
Trigger: GGCGTCCGACTGCGGGGCAGTGAAGCACTGCCTGCAGACCGTTTGGAACAAGCCAACAGTGAAATCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS GCA 72 bp AAGAGGGCGTACATAGCGCCGTCTGACTCCGCAGTCTaGAATGCGGAGCGTCAGCTGATCCCCCGCAGATAT +
Preference number: 6 (lower is better)
Translates to: KRAYIAPSDSAV*NAERQLIPRRY
Trigger: ATATCTGCGGGGGATCAGCTGACGCTCCGCATTGCAGACTGCGGAGTCAGACGGCGCTATGTACGCCCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000610929.3
CDS GCA 72 bp CACAGAACAACCAGTCAGCAGCAAGCCTACGCCCACTaGTCCTCAGTCCCAATCCAGCCAGAGGACAGGGAG +
Preference number: 6 (lower is better)
Translates to: HRTTSQQQAYAH*SSVPIQPEDRE
Trigger: CTCCCTGTCCTCTGGCTGGATTGGGACTGAGGAGCAGTGGGCGTAGGCTTGCTGCTGACTGGTTGTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493143.1
CDS CCA 72 bp CAGCTTCTTGCACACTTCGCAGAAGCCACCGTCCTTTaGCTGAGTCACGTGAACGGTCAGTGCAGGCAGCCG +
Preference number: 6 (lower is better)
Translates to: QLLAHFAEATVL*LSHVNGQCRQP
Trigger: CGGCTGCCTGCACTGACCGTTCACGTGACTCAGCCAAAGGACGGTGGCTTCTGCGAAGTGTGCAAGAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS CAA 72 bp CCAGCTTCTTGCACACTTCGCAGAAGCCACCGTCCTTaGGCTGAGTCACGTGAACGGTCAGTGCAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: PASCTLRRSHRP*AESRERSVQAA
Trigger: GGCTGCCTGCACTGACCGTTCACGTGACTCAGCCAAAGGACGGTGGCTTCTGCGAAGTGTGCAAGAAGCTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS CAA 90 bp TTGCATATGTCGGCCATGCCAGGGCCCAGGCGGTCACACTCCTCCTaGACATGTTCCACCAAGGCCTGGACAAAGGTGGAGTTGGTCCGT +
Preference number: 6 (lower is better)
Translates to: LHMSAMPGPRRSHSS*TCSTKAWTKVELVR
Trigger: ACGGACCAACTCCACCTTTGTCCAGGCCTTGGTGGAACATGTCAAGGAGGAGTGTGACCGCCTGGGCCCTGGCATGGCCGACATATGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000633965.1
CDS CAA 90 bp GGCTCCACCAGTTCCAGGGCAGGGATGACATTCTTGGAGGCCACTTaGGCGGGGACCAGAGTCTGCATGGGCATCTCTTTCACCTCATCA +
Preference number: 6 (lower is better)
Translates to: GSTSSRAGMTFLEAT*AGTRVCMGISFTSS
Trigger: TGATGAGGTGAAAGAGATGCCCATGCAGACTCTGGTCCCCGCCAAAGTGGCCTCCAAGAATGTCATCCCTGCCCTGGAACTGGTGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000493143.1
ENST00000633965.1
CDS TCA 72 bp GCTCTGCTAGGTGCTTCTGGAGAGACTCGCAGAGGTTaGGAGCAGAGCACACCTCCCCAGGACGGCTCATTT +
Preference number: 6 (lower is better)
Translates to: ALLGASGETRRG*EQSTPPQDGSF
Trigger: AAATGAGCCGTCCTGGGGAGGTGTGCTCTGCTCTCAACCTCTGCGAGTCTCTCCAGAAGCACCTAGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS TCA 72 bp CGTCTGACTCCGCAGTCTGCAATGCGGAGCGTCAGCTaGTCCCCCGCAGATATAAATCTGCCCTGCCCCAAA +
Preference number: 6 (lower is better)
Translates to: RLTPQSAMRSVS*SPADINLPCPK
Trigger: TTTGGGGCAGGGCAGATTTATATCTGCGGGGGATCAGCTGACGCTCCGCATTGCAGACTGCGGAGTCAGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000610929.3
CDS GCA 72 bp TTCACTGTTGGCTTGTTCCAAACGGTCTGCAGGCAGTaGTTCACTGCCCCGCAGTCGGACGCCGTCTTCACA +
Preference number: 6 (lower is better)
Translates to: FTVGLFQTVCRQ*FTAPQSDAVFT
Trigger: TGTGAAGACGGCGTCCGACTGCGGGGCAGTGAAGCACTGCCTGCAGACCGTTTGGAACAAGCCAACAGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS CAA 90 bp TGCTTCTTAATGGGCTCCACCAGTTCCAGGGCAGGGATGACATTCTaGGAGGCCACTTTGGCGGGGACCAGAGTCTGCATGGGCATCTCT +
Preference number: 6 (lower is better)
Translates to: CFLMGSTSSRAGMTF*EATLAGTRVCMGIS
Trigger: AGAGATGCCCATGCAGACTCTGGTCCCCGCCAAAGTGGCCTCCAAGAATGTCATCCCTGCCCTGGAACTGGTGGAGCCCATTAAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000493143.1
ENST00000633965.1
CDS CCA 72 bp CGGTCACACTCCTCCTTGACATGTTCCACCAAGGCCTaGACAAAGGTGGAGTTGGTCCGTACAGCAGTCTGG +
Preference number: 6 (lower is better)
Translates to: RSHSSLTCSTKA*TKVELVRTAVW
Trigger: CCAGACTGCTGTACGGACCAACTCCACCTTTGTCCAGGCCTTGGTGGAACATGTCAAGGAGGAGTGTGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000633965.1
CDS TCA 72 bp CAGAACCCAACCAGCGCACAGATCTCCTTGGGTTGCTaGAGAGAGCACAGAACAACCAGTCAGCAGCAAGCC +
Preference number: 6 (lower is better)
Translates to: QNPTSAQISLGC*REHRTTSQQQA
Trigger: GGCTTGCTGCTGACTGGTTGTTCTGTGCTCTCTTCAGCAACCCAAGGAGATCTGTGCGCTGGTTGGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493143.1
CDS GCA 72 bp GATCACACTGCTTCTGGTAAGGGTCTGGCAGGAAGCTaGAGCCTTTCTCAAGAGCAGCCAGGATCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: DHTASGKGLAGS*SLSQEQPGSPA
Trigger: AGCAGGAGATCCTGGCTGCTCTTGAGAAAGGCTGCAGCTTCCTGCCAGACCCTTACCAGAAGCAGTGTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS GCA 72 bp CTCCACCAGGATCTCGATCAGCACGGGCTCGTACTCTaGCACAAACTGATCACACTGCTTCTGGTAAGGGTC +
Preference number: 6 (lower is better)
Translates to: LHQDLDQHGLVL*HKLITLLLVRV
Trigger: GACCCTTACCAGAAGCAGTGTGATCAGTTTGTGGCAGAGTACGAGCCCGTGCTGATCGAGATCCTGGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS CCA 72 bp TCTTGGAGGCCACTTTGGCGGGGACCAGAGTCTGCATaGGCATCTCTTTCACCTCATCACAGAACCCAACCA +
Preference number: 6 (lower is better)
Translates to: SWRPLWRGPESA*ASLSPHHRTQP
Trigger: TGGTTGGGTTCTGTGATGAGGTGAAAGAGATGCCCATGCAGACTCTGGTCCCCGCCAAAGTGGCCTCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000493143.1
ENST00000633965.1
CDS CCA 72 bp CTGGGCTGCTGTCTCTGTGTTCTGGCACCAGTAGCTTaGGCCCCATATACACTTCTCAGTTCCCAACAAGGG +
Preference number: 6 (lower is better)
Translates to: LGCCLCVLAPVA*APYTLLSSQQG
Trigger: CCCTTGTTGGGAACTGAGAAGTGTATATGGGGCCCAAGCTACTGGTGCCAGAACACAGAGACAGCAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000495196.1
ENST00000610929.3
CDS CAA 90 bp CAGCATTGCACTGGGCTGCTGTCTCTGTGTTCTGGCACCAGTAGCTaGGGCCCCATATACACTTCTCAGTTCCCAACAAGGGCTTATGGG +
Preference number: 6 (lower is better)
Translates to: QHCTGLLSLCSGTSS*GPIYTSQFPTRAYG
Trigger: CCCATAAGCCCTTGTTGGGAACTGAGAAGTGTATATGGGGCCCAAGCTACTGGTGCCAGAACACAGAGACAGCAGCCCAGTGCAATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS GCA 72 bp ACATTCTTGGAGGCCACTTTGGCGGGGACCAGAGTCTaGATGGGCATCTCTTTCACCTCATCACAGAACCCA +
Preference number: 6 (lower is better)
Translates to: TFLEATLAGTRV*MGISFTSSQNP
Trigger: TGGGTTCTGTGATGAGGTGAAAGAGATGCCCATGCAGACTCTGGTCCCCGCCAAAGTGGCCTCCAAGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000493143.1
ENST00000633965.1
CDS GCA 72 bp TCTCCAGGTTGCGATCCAAATAACCCACCAGCTTCTTaGACACTTCGCAGAAGCCACCGTCCTTTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: SPGCDPNNPPAS*TLRRSHRPLAE
Trigger: CTCAGCCAAAGGACGGTGGCTTCTGCGAAGTGTGCAAGAAGCTGGTGGGTTATTTGGATCGCAACCTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS CCA 72 bp CATGAAGGGGGCCACCACCTCAGTCATGTCCAGCTCTaGGATCTTATTGGACTCCAGCTGCTTCTGGTGATT +
Preference number: 6 (lower is better)
Translates to: HEGGHHLSHVQL*DLIGLQLLLVI
Trigger: AATCACCAGAAGCAGCTGGAGTCCAATAAGATCCCAGAGCTGGACATGACTGAGGTGGTGGCCCCCTTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS CCA 72 bp CCTCATCACAGAACCCAACCAGCGCACAGATCTCCTTaGGTTGCTGAAGAGAGCACAGAACAACCAGTCAGC +
Preference number: 6 (lower is better)
Translates to: PHHRTQPAHRSP*VAEESTEQPVS
Trigger: GCTGACTGGTTGTTCTGTGCTCTCTTCAGCAACCCAAGGAGATCTGTGCGCTGGTTGGGTTCTGTGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493143.1
CDS TCA 72 bp AGCTCTGGGATCTTATTGGACTCCAGCTGCTTCTGGTaGTTCAGCTCTGCTAGGTGCTTCTGGAGAGACTCG +
Preference number: 6 (lower is better)
Translates to: SSGILLDSSCFW*FSSARCFWRDS
Trigger: CGAGTCTCTCCAGAAGCACCTAGCAGAGCTGAATCACCAGAAGCAGCTGGAGTCCAATAAGATCCCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS CCA 72 bp CCACCACCTCAGTCATGTCCAGCTCTGGGATCTTATTaGACTCCAGCTGCTTCTGGTGATTCAGCTCTGCTA +
Preference number: 6 (lower is better)
Translates to: PPPQSCPALGSY*TPAASGDSALL
Trigger: TAGCAGAGCTGAATCACCAGAAGCAGCTGGAGTCCAATAAGATCCCAGAGCTGGACATGACTGAGGTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS CCA 72 bp CCTCATCACAGAACCCAACCAGCGCACAGATCTCCTTaGGTTGCTGATCCTGCATGTGCATCATCATCTGGA +
Preference number: 6 (lower is better)
Translates to: PHHRTQPAHRSP*VADPACASSSG
Trigger: TCCAGATGATGATGCACATGCAGGATCAGCAACCCAAGGAGATCTGTGCGCTGGTTGGGTTCTGTGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633965.1
CDS TCA 72 bp GATGACAGGGAGGTAGGAGTCCACTATCTCCTTGCATaGAGCAGACATGTTCGGTTTCGGAAGCCAGTCACA +
Preference number: 6 (lower is better)
Translates to: DDREVGVHYLLA*SRHVRFRKPVT
Trigger: TGTGACTGGCTTCCGAAACCGAACATGTCTGCTTCATGCAAGGAGATAGTGGACTCCTACCTCCCTGTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS TCA 72 bp ATCTCGATCAGCACGGGCTCGTACTCTGCCACAAACTaGTCACACTATAAAGGAAAGTGGGGACACAGGTCC +
Preference number: 6 (lower is better)
Translates to: ISISTGSYSATN*SHYKGKWGHRS
Trigger: GGACCTGTGTCCCCACTTTCCTTTATAGTGTGATCAGTTTGTGGCAGAGTACGAGCCCGTGCTGATCGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495196.1
CDS GCA 72 bp TCCGTACAGCAGTCTGGATGTCAGTCACCATCTGAATaGAGTCCTGGCAAACGTCCCCATTATCCTTTGGCT +
Preference number: 6 (lower is better)
Translates to: SVQQSGCQSPSE*SPGKRPHYPLA
Trigger: AGCCAAAGGATAATGGGGACGTTTGCCAGGACTGCATTCAGATGGTGACTGACATCCAGACTGCTGTACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS GCA 72 bp AAGCTGCAGCCTTTCTCAAGAGCAGCCAGGATCTCCTaGTTGGTGCTGTTTTTCTCCAGGTTGCGATCCAAA +
Preference number: 6 (lower is better)
Translates to: KLQPFSRAARIS*LVLFFSRLRSK
Trigger: TTTGGATCGCAACCTGGAGAAAAACAGCACCAAGCAGGAGATCCTGGCTGCTCTTGAGAAAGGCTGCAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS GCA 72 bp TGGAATATTCCTCCTCCTAGTTCCACACATGGCGTTTaGAATGCTCGACAGCATTGCACTGGGCTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: WNIPPPSSTHGV*NARQHCTGLLS
Trigger: AGACAGCAGCCCAGTGCAATGCTGTCGAGCATTGCAAACGCCATGTGTGGAACTAGGAGGAGGAATATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS CCA 72 bp CCTCATCACAGAACCCAACCAGCGCACAGATCTCCTTaGGTTGCTGAAGAGACATGTGCATCATCATCTGGA +
Preference number: 6 (lower is better)
Translates to: PHHRTQPAHRSP*VAEETCASSSG
Trigger: TCCAGATGATGATGCACATGTCTCTTCAGCAACCCAAGGAGATCTGTGCGCTGGTTGGGTTCTGTGATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394934.4
CDS CAA 72 bp TCCTTCAGCATATCACCAGCTGCGGTGACAACGTCTTaGCATATGTCGCAGGGAAGGGATTTCACTGTTGGC +
Preference number: 6 (lower is better)
Translates to: SFSISPAAVTTS*HMSQGRDFTVG
Trigger: GCCAACAGTGAAATCCCTTCCCTGCGACATATGCAAAGACGTTGTCACCGCAGCTGGTGATATGCTGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS CAA 72 bp ATCACAGAACCCAACCAGCGCACAGATCTCCTTGGGTaGCTGATCCTGCATGTGCATCATCATCTGGATAGC +
Preference number: 6 (lower is better)
Translates to: ITEPNQRTDLLG*LILHVHHHLDS
Trigger: GCTATCCAGATGATGATGCACATGCAGGATCAGCAACCCAAGGAGATCTGTGCGCTGGTTGGGTTCTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000633965.1
CDS CAA 90 bp GTGGCATTGTCCTTCAGCATATCACCAGCTGCGGTGACAACGTCTTaGCATATGTCGCAGGGAAGGGATTTCACTGTTGGCTTGTTCCAA +
Preference number: 6 (lower is better)
Translates to: VALSFSISPAAVTTS*HMSQGRDFTVGLFQ
Trigger: TTGGAACAAGCCAACAGTGAAATCCCTTCCCTGCGACATATGCAAAGACGTTGTCACCGCAGCTGGTGATATGCTGAAGGACAATGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS TCA 72 bp TTGGTCCGTACAGCAGTCTGGATGTCAGTCACCATCTaGATGCAGTCCTGGCAAACGTCCCCATTATCCTTT +
Preference number: 6 (lower is better)
Translates to: LVRTAVWMSVTI*MQSWQTSPLSF
Trigger: AAAGGATAATGGGGACGTTTGCCAGGACTGCATTCAGATGGTGACTGACATCCAGACTGCTGTACGGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394934.4
ENST00000394936.8
CDS GCA 72 bp CAGGAATTCACACACCTCACAGTAAACATCAGACTTTaGTGGGACCTCGTGCTTCTTAATGGGCTCCACCAG +
Preference number: 6 (lower is better)
Translates to: QEFTHLTVNIRL*WDLVLLNGLHQ
Trigger: CTGGTGGAGCCCATTAAGAAGCACGAGGTCCCAGCAAAGTCTGATGTTTACTGTGAGGTGTGTGAATTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000493143.1
ENST00000633965.1
CDS GCA 72 bp AGCCTTTCTCAAGAGCAGCCAGGATCTCCTGCTTGGTaGTGTTTTTCTCCAGGTTGCGATCCAAATAACCCA +
Preference number: 6 (lower is better)
Translates to: SLSQEQPGSPAW*CFSPGCDPNNP
Trigger: TGGGTTATTTGGATCGCAACCTGGAGAAAAACAGCACCAAGCAGGAGATCCTGGCTGCTCTTGAGAAAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000610929.3
CDS CAA 72 bp ATCACAGAACCCAACCAGCGCACAGATCTCCTTGGGTaGCTGAAGAGACATGTGCATCATCATCTGGATAGC +
Preference number: 6 (lower is better)
Translates to: ITEPNQRTDLLG*LKRHVHHHLDS
Trigger: GCTATCCAGATGATGATGCACATGTCTCTTCAGCAACCCAAGGAGATCTGTGCGCTGGTTGGGTTCTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394934.4
CDS CCA 72 bp GAATTCACACACCTCACAGTAAACATCAGACTTTGCTaGGACCTCGTGCTTCTTAATGGGCTCCACCAGTTC +
Preference number: 6 (lower is better)
Translates to: EFTHLTVNIRLC*DLVLLNGLHQF
Trigger: GAACTGGTGGAGCCCATTAAGAAGCACGAGGTCCCAGCAAAGTCTGATGTTTACTGTGAGGTGTGTGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000493143.1
ENST00000633965.1
CDS CAA 90 bp TCCTGGCACTCTTCCGACAGGGACTTCGGCAGCTTCGAGCACATTTaGTCAAAAGCGTCGAGTATTTCTTTCTCAGTCTTGTTGTTGTCA +
Preference number: 6 (lower is better)
Translates to: SWHSSDRDFGSFEHI*SKASSISFSVLLLS
Trigger: TGACAACAACAAGACTGAGAAAGAAATACTCGACGCTTTTGACAAAATGTGCTCGAAGCTGCCGAAGTCCCTGTCGGAAGAGTGCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000493143.1
ENST00000633965.1
CDS CAA 72 bp TCTTCCGACAGGGACTTCGGCAGCTTCGAGCACATTTaGTCAAAAGCGTCGAGTATTTCTTTCTCAGTCTTG +
Preference number: 6 (lower is better)
Translates to: SSDRDFGSFEHI*SKASSISFSVL
Trigger: CAAGACTGAGAAAGAAATACTCGACGCTTTTGACAAAATGTGCTCGAAGCTGCCGAAGTCCCTGTCGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394934.4
ENST00000394936.8
ENST00000493143.1
ENST00000633965.1