Pregenerated sensors for PRXL2C (Homo sapiens)
Ensembl gene IDs: ENSG00000158122Ensembl transcript IDs: ENST00000375234.8, ENST00000411939.5, ENST00000446045.1, ENST00000464512.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGTTCAAGCCCCCTTTATaGTTCCCTAACTCCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQFKPPL*FPNSSK Trigger: CTTTGAGGAGTTAGGGAAGCATAAAGGGGGCTTGAA...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| 3UTR-3UTR CAA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGTTCCAGAAGGTCCAGTaGAAAGTGACTGAGTGCATT | + |
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Preference number: 3 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQFQKVQ*KVTECI Trigger: AATGCACTCAGTCACTTTCAACTGGACCTTCTGGAA...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR TCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGGGAAATGCTGCCGCGTaGCCGGGGCCGGCGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQGNAAA*PGPARP Trigger: TGGCCGCGCCGGCCCCGGTCACGCGGCAGCATTTCC...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446045.1 |
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| CDS-3UTR GCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGCCGAACGGTACCCGCTaGCCGCGGGCGTCCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQPNGTR*PRASST Trigger: GGTGCTGGACGCCCGCGGGCAGCGGGTACCGTTCGG...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375234.8 |
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| CDS-3UTR CCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGGTAATCCCAACACATTaGGAGGCCGAGGTGGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQVIPTH*EAEVGG Trigger: TCCGCCCACCTCGGCCTCCCAATGTGTTGGGATTAC...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR CCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGGGATCACCTGAGGTATaGAGTTCGAGACCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQGSPEV*SSRPAW Trigger: CCAGGCTGGTCTCGAACTCCATACCTCAGGTGATCC...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR GCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGCAAGGAGGCGGAAGTTaGAGTGAGCTGAGATTGAGC | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQQGGGS*SELRLS Trigger: GCTCAATCTCAGCTCACTGCAACTTCCGCCTCCTTG...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR GCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGAGGCTGAGGCAGAATTaGTTGAACCAAGGAGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQRLRQN*LNQGGG Trigger: TCCGCCTCCTTGGTTCAAGCAATTCTGCCTCAGCCT...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR GCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGAGTGAGCCGAGATCGTaGCATTGCACTCCATCCTGT | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQSEPRS*HCTPSC Trigger: ACAGGATGGAGTGCAATGGCACGATCTCGGCTCACT...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR CCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGCTTGGCCGGGAATGGTaGCTAACGCCTGCAATTCTA | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQLGREW*LTPAIL Trigger: TAGAATTGCAGGCGTTAGCCACCATTCCCGGCCAAG...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR CCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGATTCTTGGCCGGGAATaGTGGCTAACGCCTGCAATT | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQILGRE*WLTPAI Trigger: AATTGCAGGCGTTAGCCACCATTCCCGGCCAAGAAT...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR GCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGATGGTGGCTAACGCCTaGAATTCTAGCACTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQMVANA*NSSTLG Trigger: TCCCAAAGTGCTAGAATTGCAGGCGTTAGCCACCAT...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR TCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGGACACTGGCTATATGTaGAATGTTCGGATTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQDTGYM*NVRIAT Trigger: TGTGGCAATCCGAACATTTCACATATAGCCAGTGTC...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR CCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGCTTGTAAGAAACTCCTaGGGATTTTGGCCAGATCCT | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQLVRNS*GFWPDP Trigger: AGGATCTGGCCAAAATCCCCAGGAGTTTCTTACAAG...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR TCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGATGGATGTTGTTACCTaGGGAAGCAATTTCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQMDVVT*GSNFFT Trigger: GGTGAAGAAATTGCTTCCTCAGGTAACAACATCCAT...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411939.5 |
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| CDS-3UTR GCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGCCTCTACGTATTCCTTaGAGATGTAACACAGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQPLRIP*RCNTGN Trigger: ATTTCCTGTGTTACATCTGCAAGGAATACGTAGAGG...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000375234.8 ENST00000446045.1 |
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| CDS-3UTR CCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGAATTTTAACAATTCTTaGCCGGGAATGGTGGCTAAC | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQNFNNS*PGMVAN Trigger: GTTAGCCACCATTCCCGGCCAAGAATTGTTAAAATT...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR GCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGTTGAAAGTGACTGAGTaGATTTTAAGTCACACATGG | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQLKVTE*ILSHTW Trigger: CCATGTGTGACTTAAAATGCACTCAGTCACTTTCAA...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR CCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGGTAAAGCAATTACGATaGAAAAGTGGACTACAGCTT | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQVKQLR*KSGLQL Trigger: AAGCTGTAGTCCACTTTTCCATCGTAATTGCTTTAC...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR CCA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGCTACTGGCAACATTTTaGTGTTTATTTCCTGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQLLATF*CLFPVF Trigger: AAAGACAGGAAATAAACACCAAAATGTTGCCAGTAG...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| 3UTR CAA 72 bp | TTTGATATTTTGCCTTCTTCACTGAATATAATGGTCTaGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: FDILPSSLNIMV*CCSPVPLYTVR Trigger: TCTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAAGAAGGCAAAATATCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| 3UTR CAA 72 bp | TATTTTGCCTTCTTCACTGAATATAATGGTCTTGTGTaGTTCTCCTGTCCCCTTATATACTGTCAGAATTTA | + |
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Preference number: 4 (lower is better) Translates to: YFAFFTEYNGLV*FSCPLIYCQNL Trigger: TAAATTCTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAAGAAGGCAAAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS GCA 90 bp | GTAAAGCAGCACCCTCGGGCCCCGAAGGATCCCTGTACTTCGCCGTaGGTGACGCGAGCAAAGGCGACGCCCGCGGGGCCGGGACCGGCG | + |
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Preference number: 5 (lower is better) Translates to: VKQHPRAPKDPCTSP*VTRAKATPAGPGPA Trigger: CGCCGGTCCCGGCCCCGCGGGCGTCGCCTTTGCTCGCGTCACGCACGGCGAAGTACAGGGATCCTTCGGGGCCCGAGGGTGCTGCTTTAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464512.1 |
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| CDS-3UTR CAA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGTGTAATCCCAACACATaGGGAGGCCGAGGTGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQCNPNT*GGRGGR Trigger: CCGCCCACCTCGGCCTCCCAATGTGTTGGGATTACA...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR CAA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGGAGGCTGAGGCAGAATaGCTTGAACCAAGGAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQEAEAE*LEPRRR Trigger: CCGCCTCCTTGGTTCAAGCAATTCTGCCTCAGCCTC...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR CAA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGGCCGAGATCGTGCCATaGCACTCCATCCTGTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQAEIVP*HSILCN Trigger: GTTGCACAGGATGGAGTGCAATGGCACGATCTCGGC...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR CAA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGCTGAATATAATGGTCTaGTGTTGTTCTCCTGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQLNIMV*CCSPVP Trigger: GGGGACAGGAGAACAACACAAGACCATTATATTCAG...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS-3UTR CAA 90 bp | TTCACTGAATATAATGGTCTTGTGTTGTTCTCCTGTCCCCTTATATACTGTCAGCCTACTGGCAACATTTaGGTGTTTATTTCCTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: FTEYNGLVLFSCPLIYCQPTGNI*VFISCL Trigger: AAGACAGGAAATAAACACCAAAATGTTGCCAGTAGG...CTGACAGTATATAAGGGGACAGGAGAACAACACAAGACCATTATATTCAGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375234.8 ENST00000411939.5 ENST00000446045.1 |
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| CDS TCA 72 bp | CTCGGGCCCCGAAGGATCCCTGTACTTCGCCGTGCGTaGCGCGAGCAAAGGCGACGCCCGCGGGGCCGGGAC | + |
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Preference number: 6 (lower is better) Translates to: LGPRRIPVLRRA*REQRRRPRGRD Trigger: GTCCCGGCCCCGCGGGCGTCGCCTTTGCTCGCGTCACGCACGGCGAAGTACAGGGATCCTTCGGGGCCCGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464512.1 |
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| CDS GCA 72 bp | CACCCTCGGGCCCCGAAGGATCCCTGTACTTCGCCGTaGGTGACGCGAGCAAAGGCGACGCCCGCGGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: HPRAPKDPCTSP*VTRAKATPAGP Trigger: CGGCCCCGCGGGCGTCGCCTTTGCTCGCGTCACGCACGGCGAAGTACAGGGATCCTTCGGGGCCCGAGGGTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464512.1 |
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