RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRUNE2 (Homo sapiens)

Ensembl gene IDs: ENSG00000106772

Ensembl transcript IDs: ENST00000223609.10, ENST00000376713.3, ENST00000376717.6, ENST00000376718.8, ENST00000424866.1, ENST00000426088.5, ENST00000428286.5, ENST00000443509.6, ENST00000466266.6, ENST00000480674.1, ENST00000488346.5, ENST00000489555.1, ENST00000492157.5, ENST00000494975.1

Found 2267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAAAGAGAAAACGATGGAGGCTTATGGAGGAAAGAGGGCTGAACTaGGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGT +
Preference number: 1 (lower is better)
Translates to: EKRKRWRLMEERGLN*VCVGTCGRTGGDRG
Trigger: ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCTCTTTCCTCCATAAGCCTCCATCGTTTTCTCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR TCA 90 bp GTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTGAAGCAATaGGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTA +
Preference number: 1 (lower is better)
Translates to: VWARAEGREETEVKQ*GQRNSITCAKMSTL
Trigger: TAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTCACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR GCA 90 bp AAACCATTCTTAGCTTGCAGTGGTGAGCGAGACTTAGCTGTGGTTTaGCACCCCACCTCACTAGAGGCCTACAGACTTGAAATCTTGTTG +
Preference number: 1 (lower is better)
Translates to: KPFLACSGERDLAVV*HPTSLEAYRLEILL
Trigger: CAACAAGATTTCAAGTCTGTAGGCCTCTAGTGAGGTGGGGTGGCAAACCACAGCTAAGTCTCGCTCACCACTGCAAGCTAAGAATGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR TCA 90 bp GTGAGATTGTTGCTGTGTCTGTTTGGCTATAACAAGAGCCCTCTATaGACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAACACT +
Preference number: 1 (lower is better)
Translates to: VRLLLCLFGYNKSPL*TALCPQVCTTTLNT
Trigger: AGTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGCCAAACAGACACAGCAACAATCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR TCA 90 bp GTAAACATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTaGACTGCTCAGCTCTGCGGCTGTAGTGTGAAAGTAGCTGTAGAC +
Preference number: 1 (lower is better)
Translates to: VNIVNVLGIVGHTVC*TAQLCGCSVKVAVD
Trigger: GTCTACAGCTACTTTCACACTACAGCCGCAGAGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATGTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR CCA 90 bp CCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTaGAGACTAAGAATGGTTCCCAGAGTGAGGCACGGACTTCAGCCA +
Preference number: 1 (lower is better)
Translates to: PLHFYFCQLLCNRRH*RLRMVPRVRHGLQP
Trigger: TGGCTGAAGTCCGTGCCTCACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR TCA 90 bp ACCTTGCACTTGAGTTCTTGGCACTTAAAAGGTAACCTCTGGAGCTaGGTTTATGGCCTGAAACTCAGAGAGCTACCAAACATGCAACAC +
Preference number: 1 (lower is better)
Translates to: TLHLSSWHLKGNLWS*VYGLKLRELPNMQH
Trigger: GTGTTGCATGTTTGGTAGCTCTCTGAGTTTCAGGCCATAAACTCAGCTCCAGAGGTTACCTTTTAAGTGCCAAGAACTCAAGTGCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR CCA 90 bp CAAACAGGAATATTGGGTAACTGTATTTACGTCAACACTGTGTTCTaGGAGAGGTGTAATTTGGGCTTTCAAAAGTGGAGGTGGGCTGTG +
Preference number: 1 (lower is better)
Translates to: QTGILGNCIYVNTVF*ERCNLGFQKWRWAV
Trigger: CACAGCCCACCTCCACTTTTGAAAGCCCAAATTACACCTCTCCCAGAACACAGTGTTGACGTAAATACAGTTACCCAATATTCCTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR TCA 90 bp AACATTGTATGGCTTCAACAGAAACTTCAGGATTTTCTTCCACACTaGGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATC +
Preference number: 1 (lower is better)
Translates to: NIVWLQQKLQDFLPH*ATALKQTFSLLDTI
Trigger: GATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAAGAAAATCCTGAAGTTTCTGTTGAAGCCATACAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR TCA 90 bp TCTTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTaGCACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTAATCAAG +
Preference number: 1 (lower is better)
Translates to: SSTLSYCPQTNFLTP*HYLLCKFLFFLLIK
Trigger: CTTGATTAAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR GCA 90 bp GTATATACTAAAGAAGTGCTTCTAAGAAGGCTTCATTTTGGCAATTaGAACCTAAGCAGTGATTTTGTGGCTAGGACTCCTCATGTTTTT +
Preference number: 1 (lower is better)
Translates to: VYTKEVLLRRLHFGN*NLSSDFVARTPHVF
Trigger: AAAAACATGAGGAGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCTTAGAAGCACTTCTTTAGTATATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR CCA 90 bp AGAGAGCTACCAAACATGCAACACGGATTCTTAAATTTCACAATGTaGTGGTCACCAACATTCATCAGGAAAATGATGTTAAAAGACCAA +
Preference number: 1 (lower is better)
Translates to: RELPNMQHGFLNFTM*WSPTFIRKMMLKDQ
Trigger: TTGGTCTTTTAACATCATTTTCCTGATGAATGTTGGTGACCACCACATTGTGAAATTTAAGAATCCGTGTTGCATGTTTGGTAGCTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR CCA 90 bp GAGCTACCAAACATGCAACACGGATTCTTAAATTTCACAATGTGGTaGTCACCAACATTCATCAGGAAAATGATGTTAAAAGACCAATTT +
Preference number: 1 (lower is better)
Translates to: ELPNMQHGFLNFTMW*SPTFIRKMMLKDQF
Trigger: AAATTGGTCTTTTAACATCATTTTCCTGATGAATGTTGGTGACCACCACATTGTGAAATTTAAGAATCCGTGTTGCATGTTTGGTAGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTTTTCCTGGGGAGAGTTaGGACCTGTGTACTTTAAAC +
Preference number: 2 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGFPGES*DLCTLN
Trigger: GTTTAAAGTACACAGGTCTCAACTCTCCCCAGGAAA...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGGTTTCAACAGAACCATaGACCAGAAAAGCATCCTCT +
Preference number: 2 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRVSTEP*TRKASS
Trigger: AGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAAC...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTAATGAAGTATTGAAATaGAAGGTCCTACTTTCTTGC +
Preference number: 2 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGNEVLK*KVLLSC
Trigger: GCAAGAAAGTAGGACCTTCCATTTCAATACTTCATT...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTGGAGGAAAGAGGGCTaGACTGCGTGTGTGTGGGCA +
Preference number: 2 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSWRKEG*TACVWA
Trigger: TGCCCACACACACGCAGTTCAGCCCTCTTTCCTCCA...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCACCATGAGACTAGGGTaGAACCGCTCTCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: KVVTSSFYPGLQISWTALTMRLG*NRSHPF
Trigger: GAAGGGGTGAGAGCGGTTCCACCCTAGTCTCATGGT...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGTCAACACTGTGTTCTaGGAGAGGTGTAATTTGGGC +
Preference number: 2 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSVNTVF*ERCNLG
Trigger: GCCCAAATTACACCTCTCCCAGAACACAGTGTTGAC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAGGTAACCTCTGGAGCTaGGTTTATGGCCTGAAACTC +
Preference number: 2 (lower is better)
Translates to: AITRALYEQLYALRFAPLGNLWS*VYGLKL
Trigger: GAGTTTCAGGCCATAAACTCAGCTCCAGAGGTTACC...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATGAATGGTTCCCAGAGTaGGGCACGGACTTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: ATALKQTFSLLDTIFCANEWFPE*GTDFSQ
Trigger: TTGGCTGAAGTCCGTGCCTCACTCTGGGAACCATTC...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAACAGAGGTGAAGCAATaGGGTCAGAGAAACTCAATC +
Preference number: 2 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTETEVKQ*GQRNSI
Trigger: GATTGAGTTTCTCTGACCTCATTGCTTCACCTCTGT...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGATGGAGGAAAGAGGGCTaGACTGCGTGTGTGTGGGCA +
Preference number: 2 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRWRKEG*TACVWA
Trigger: TGCCCACACACACGCAGTTCAGCCCTCTTTCCTCCA...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAATTTCCTGGGGAGAGTTaGGACCTGTGTACTTTAAAC +
Preference number: 2 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTEFPGES*DLCTLN
Trigger: GTTTAAAGTACACAGGTCTCAACTCTCCCCAGGAAA...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTCTGAATGCTACCAAATaGTTTTTGAGTAGGCCACCT +
Preference number: 2 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSLNATK*FLSRPP
Trigger: AGGTGGCCTACTCAAAAATCATTTGGTAGCATTCAG...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAGTGTGTGTGGGCACGTaGGGAAGGACGGGAGGAGAC +
Preference number: 2 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAVCVGT*GRTGGD
Trigger: GTCTCCTCCCGTCCTTCCGCACGTGCCCACACACAC...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAATCCACACTGAGCTACTaGCCTCAAACAAACTTTCTC +
Preference number: 2 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTESTLSY*PQTNFL
Trigger: GAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGA...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAGGACTCCAAATATCCTaGACAGCTCTCCCCAATGAA +
Preference number: 2 (lower is better)
Translates to: AITRALYEQLYALRFAPLGLQIS*TALPNE
Trigger: TTCATTGGGGAGAGCTGTCCAGGATATTTGGAGTCC...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAGGCTGTGGGAGGGGGTaGGCTGTAGGGTTTTTCTGT +
Preference number: 2 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRGCGRG*AVGFFC
Trigger: ACAGAAAAACCCTACAGCCCACCCCCTCCCACAGCC...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTGGGCTTTCAAAAGTaGAGGTGGGCTGTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: ATALKQTFSLLDTIFCANLGFQK*RWAVGG
Trigger: CCCTCCCACAGCCCACCTCCACTTTTGAAAGCCCAA...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTAACAAGATACTCGCTTaGAAGGATCAAGAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSNKILA*KDQEEK
Trigger: TTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTT...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACTTCCTGTGACAGGGTaGCCATGGAATTCATTTTAC +
Preference number: 2 (lower is better)
Translates to: AITRALYEQLYALRFAPLLPVTG*PWNSFY
Trigger: GTAAAATGAATTCCATGGTCACCCTGTCACAGGAAG...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAATTTCATTACTTCCTGTaGCAGGGTGACCATGGAATT +
Preference number: 2 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTEFHYFL*QGDHGI
Trigger: AATTCCATGGTCACCCTGTCACAGGAAGTAATGAAA...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTTTAATCAAGGAGCTTTaGGAAACAATGCTTTTGCCC +
Preference number: 2 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSLIKEL*ETMLLP
Trigger: GGGCAAAAGCATTGTTTCTCAAAGCTCCTTGATTAA...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTGACTTAGCTGTGGTTTaGCACCCCACCTCACTAGAG +
Preference number: 2 (lower is better)
Translates to: SHTSENVLESNPIEHCMADLAVV*HPTSLE
Trigger: CTCTAGTGAGGTGGGGTGGCAAACCACAGCTAAGTC...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAACCATGAGACTAGGGTaGAACCGCTCTCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKTMRLG*NRSHPF
Trigger: GAAGGGGTGAGAGCGGTTCCACCCTAGTCTCATGGT...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTACCATGAGACTAGGGTaGAACCGCTCTCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCTMRLG*NRSHPF
Trigger: GAAGGGGTGAGAGCGGTTCCACCCTAGTCTCATGGT...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTGGCTGTGGGAGGGGGTaGGCTGTAGGGTTTTTCTGT +
Preference number: 2 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVGCGRG*AVGFFC
Trigger: ACAGAAAAACCCTACAGCCCACCCCCTCCCACAGCC...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTAAAATAAAGTTGACGTaGATTAGAAAGCCCGGCTTC +
Preference number: 2 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSKIKLT*IRKPGF
Trigger: GAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTT...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAGAATGGTTCCCAGAGTaGGGCACGGACTTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIEWFPE*GTDFSQ
Trigger: TTGGCTGAAGTCCGTGCCTCACTCTGGGAACCATTC...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCATGGAGGAAAGAGGGCTaGACTGCGTGTGTGTGGGCA +
Preference number: 2 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAWRKEG*TACVWA
Trigger: TGCCCACACACACGCAGTTCAGCCCTCTTTCCTCCA...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTATTTCATTACTTCCTGTaGCAGGGTGACCATGGAATT +
Preference number: 2 (lower is better)
Translates to: AITRALYEQLYALRFAPLFHYFL*QGDHGI
Trigger: AATTCCATGGTCACCCTGTCACAGGAAGTAATGAAA...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACACCATGAGACTAGGGTaGAACCGCTCTCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHTMRLG*NRSHPF
Trigger: GAAGGGGTGAGAGCGGTTCCACCCTAGTCTCATGGT...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTTTGGGCTTTCAAAAGTaGAGGTGGGCTGTGGGAGGG +
Preference number: 2 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVLGFQK*RWAVGG
Trigger: CCCTCCCACAGCCCACCTCCACTTTTGAAAGCCCAA...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTGAATGGTTCCCAGAGTaGGGCACGGACTTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSEWFPE*GTDFSQ
Trigger: TTGGCTGAAGTCCGTGCCTCACTCTGGGAACCATTC...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTACAAGCCAGATGTTATaGAGGAGGAGATCCAACAGA +
Preference number: 2 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSTSQML*RRRSNR
Trigger: TCTGTTGGATCTCCTCCTTCATAACATCTGGCTTGT...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAAACAAGAGCCCTCTATaGACAGCTCTATGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRNKSPL*TALCPQ
Trigger: CTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTT...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTGATTTTCTTCCACACTaGGCTACTGCCCTCAAACAA +
Preference number: 2 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSDFLPH*ATALKQ
Trigger: TTGTTTGAGGGCAGTAGCTCAGTGTGGAAGAAAATC...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATGTCAACACTGTGTTCTaGGAGAGGTGTAATTTGGGC +
Preference number: 2 (lower is better)
Translates to: ATALKQTFSLLDTIFCANVNTVF*ERCNLG
Trigger: GCCCAAATTACACCTCTCCCAGAACACAGTGTTGAC...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAGACAGCTCTCCCCAATaGATTTTCCACCATGAGACT +
Preference number: 2 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRDSSPQ*IFHHET
Trigger: AGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTC...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAACTATGCCCTCAGGTTTaGACCACTACACTGAACACT +
Preference number: 2 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSELCPQV*TTTLNT
Trigger: AGTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAG...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAGACTTAGCTGTGGTTTaGCACCCCACCTCACTAGAG +
Preference number: 2 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRDLAVV*HPTSLE
Trigger: CTCTAGTGAGGTGGGGTGGCAAACCACAGCTAAGTC...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGAAGAAGGCTTCATTTTaGCAATTGCAACCTAAGCAG +
Preference number: 2 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVKKASF*QLQPKQ
Trigger: CTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCTT...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAGGACTCCAAATATCCTaGACAGCTCTCCCCAATGAA +
Preference number: 2 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRGLQIS*TALPNE
Trigger: TTCATTGGGGAGAGCTGTCCAGGATATTTGGAGTCC...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAAATGAAGTATTGAAATaGAAGGTCCTACTTTCTTGC +
Preference number: 2 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTENEVLK*KVLLSC
Trigger: GCAAGAAAGTAGGACCTTCCATTTCAATACTTCATT...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTAACAAGATACTCGCTTaGAAGGATCAAGAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSNKILA*KDQEEK
Trigger: TTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTT...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAACAAGCCAGATGTTATaGAGGAGGAGATCCAACAGA +
Preference number: 2 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRTSQML*RRRSNR
Trigger: TCTGTTGGATCTCCTCCTTCATAACATCTGGCTTGT...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAAACAAGAGCCCTCTATaGACAGCTCTATGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLNKSPL*TALCPQ
Trigger: CTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTT...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAAACAAGAGCCCTCTATaGACAGCTCTATGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: STKTSLCGCVSVPLYLSANKSPL*TALCPQ
Trigger: CTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTT...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAGGTAACCTCTGGAGCTaGGTTTATGGCCTGAAACTC +
Preference number: 2 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAGNLWS*VYGLKL
Trigger: GAGTTTCAGGCCATAAACTCAGCTCCAGAGGTTACC...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATCTGAATGCTACCAAATaGTTTTTGAGTAGGCCACCT +
Preference number: 2 (lower is better)
Translates to: ATALKQTFSLLDTIFCANLNATK*FLSRPP
Trigger: AGGTGGCCTACTCAAAAATCATTTGGTAGCATTCAG...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACCTATGCCCTCAGGTTTaGACCACTACACTGAACACT +
Preference number: 2 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHLCPQV*TTTLNT
Trigger: AGTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAG...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTGTAATAGGAGACACTaGAGACTAAGAATGGTTCCC +
Preference number: 2 (lower is better)
Translates to: ATALKQTFSLLDTIFCANCNRRH*RLRMVP
Trigger: GGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACA...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAGGGAGAGGTGTAATTTaGGCTTTCAAAAGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRGRGVI*AFKSGG
Trigger: ACCTCCACTTTTGAAAGCCCAAATTACACCTCTCCC...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAGTTTTACACCTTGTGTaGTTTGTGGCTGTCCTAGTC +
Preference number: 2 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEVLHLV*FVAVLV
Trigger: GACTAGGACAGCCACAAACCACACAAGGTGTAAAAC...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAGTTTTACACCTTGTGTaGTTTGTGGCTGTCCTAGTC +
Preference number: 2 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRVLHLV*FVAVLV
Trigger: GACTAGGACAGCCACAAACCACACAAGGTGTAAAAC...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACACAAGCCAGATGTTATaGAGGAGGAGATCCAACAGA +
Preference number: 2 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHTSQML*RRRSNR
Trigger: TCTGTTGGATCTCCTCCTTCATAACATCTGGCTTGT...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAATTTCATTACTTCCTGTaGCAGGGTGACCATGGAATT +
Preference number: 2 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEFHYFL*QGDHGI
Trigger: AATTCCATGGTCACCCTGTCACAGGAAGTAATGAAA...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTTTAATCAAGGAGCTTTaGGAAACAATGCTTTTGCCC +
Preference number: 2 (lower is better)
Translates to: SHTSENVLESNPIEHCMALIKEL*ETMLLP
Trigger: GGGCAAAAGCATTGTTTCTCAAAGCTCCTTGATTAA...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAGTTTCAACAGAACCATaGACCAGAAAAGCATCCTCT +
Preference number: 2 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKVSTEP*TRKASS
Trigger: AGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAAC...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAGTTTCAACAGAACCATaGACCAGAAAAGCATCCTCT +
Preference number: 2 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEVSTEP*TRKASS
Trigger: AGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAAC...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAAGCCCGGCTTCCCTTTaGGAAGTTAAAGGAGATTCT +
Preference number: 2 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLSPASL*EVKGDS
Trigger: AGAATCTCCTTTAACTTCTCAAAGGGAAGCCGGGCT...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAACTGAATGCTACCAAATaGTTTTTGAGTAGGCCACCT +
Preference number: 2 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSELNATK*FLSRPP
Trigger: AGGTGGCCTACTCAAAAATCATTTGGTAGCATTCAG...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTAGAGGCCTACAGACTTaGAATCTTGTTGGCATTTTA +
Preference number: 2 (lower is better)
Translates to: SHTSENVLESNPIEHCMARGLQT*NLVGIL
Trigger: TAAAATGCCAACAAGATTTCAAGTCTGTAGGCCTCT...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCCTTCATTTTGGCAATTaGAACCTAAGCAGTGATTTT +
Preference number: 2 (lower is better)
Translates to: KVVTSSFYPGLQISWTALLHFGN*NLSSDF
Trigger: AAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAG...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGTATCTAAATACAAATTaGGGTGGAGTAGGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVYLNTN*GGVGKD
Trigger: ATCCTTTCCTACTCCACCCCAATTTGTATTTAGATA...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAGTCAACACTGTGTTCTaGGAGAGGTGTAATTTGGGC +
Preference number: 2 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAVNTVF*ERCNLG
Trigger: GCCCAAATTACACCTCTCCCAGAACACAGTGTTGAC...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTTTGAGGCACATAATTaGCAAAATAGGAAAGTACAC +
Preference number: 2 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAFEAHN*QNRKVH
Trigger: GTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTAATCCAGCTAATCTATaGAAACAAATCCACTCATAC +
Preference number: 2 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSANPANL*KQIHSY
Trigger: GTATGAGTGGATTTGTTTCCATAGATTAGCTGGATT...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGGTTTTACACCTTGTGTaGTTTGTGGCTGTCCTAGTC +
Preference number: 2 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLVLHLV*FVAVLV
Trigger: GACTAGGACAGCCACAAACCACACAAGGTGTAAAAC...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGACTTCCTGTGACAGGGTaGCCATGGAATTCATTTTAC +
Preference number: 2 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRLPVTG*PWNSFY
Trigger: GTAAAATGAATTCCATGGTCACCCTGTCACAGGAAG...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTTTTGCACCACTACACTaGACACTGGATTTTTCATTA +
Preference number: 2 (lower is better)
Translates to: SHTSENVLESNPIEHCMAFAPLH*TLDFSL
Trigger: TAATGAAAAATCCAGTGTTCAGTGTAGTGGTGCAAA...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTGTTTCAACAGAACCATaGACCAGAAAAGCATCCTCT +
Preference number: 2 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVVSTEP*TRKASS
Trigger: AGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAAC...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACCTACCAAATGATTTTTaGGTAGGCCACCTTGCACTT +
Preference number: 2 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHLPNDF*VGHLAL
Trigger: AAGTGCAAGGTGGCCTACTCAAAAATCATTTGGTAG...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCTATGCCCTCAGGTTTaGACCACTACACTGAACACT +
Preference number: 2 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLLCPQV*TTTLNT
Trigger: AGTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAG...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAAGCTTTGAGAAACAATaGTTTTGCCCCAATGACCCC +
Preference number: 2 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRSFEKQ*FCPNDP
Trigger: GGGGTCATTGGGGCAAAAGCATTGTTTCTCAAAGCT...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATGTAATAGGAGACACTaGAGACTAAGAATGGTTCCC +
Preference number: 2 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQICNRRH*RLRMVP
Trigger: GGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACA...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTTGTAATAGGAGACACTaGAGACTAAGAATGGTTCCC +
Preference number: 2 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVCNRRH*RLRMVP
Trigger: GGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACA...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTGGACTCCAAATATCCTaGACAGCTCTCCCCAATGAA +
Preference number: 2 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLGLQIS*TALPNE
Trigger: TTCATTGGGGAGAGCTGTCCAGGATATTTGGAGTCC...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAGGGAGAGGTGTAATTTaGGCTTTCAAAAGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRGRGVI*AFKSGG
Trigger: ACCTCCACTTTTGAAAGCCCAAATTACACCTCTCCC...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTTAAATTTCACAATGTaGTGGTCACCAACATTCATC +
Preference number: 2 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSLNFTM*WSPTFI
Trigger: GATGAATGTTGGTGACCACCACATTGTGAAATTTAA...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR CAA 90 bp TTCTTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTaGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTAATCAA +
Preference number: 2 (lower is better)
Translates to: FFHTELLPSNKLSHS*TLSSVQISVLSLNQ
Trigger: TTGATTAAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTCTTCATTTTGGCAATTaGAACCTAAGCAGTGATTTT +
Preference number: 2 (lower is better)
Translates to: SHTSENVLESNPIEHCMALHFGN*NLSSDF
Trigger: AAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAG...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTGAGAAACAATGCTTTTaGCCCAATGACCCCTTGGTT +
Preference number: 2 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLEKQCF*PNDPLV
Trigger: AACCAAGGGGTCATTGGGGCAAAAGCATTGTTTCTC...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTAGCTTTGAGAAACAATaGTTTTGCCCCAATGACCCC +
Preference number: 2 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLSFEKQ*FCPNDP
Trigger: GGGGTCATTGGGGCAAAAGCATTGTTTCTCAAAGCT...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAAAACCATTCTTAGCTTaGAGTGGTGAGCGAGACTTA +
Preference number: 2 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLKPFLA*SGERDL
Trigger: TAAGTCTCGCTCACCACTGCAAGCTAAGAATGGTTT...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTATCTAAATACAAATTaGGGTGGAGTAGGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: ATALKQTFSLLDTIFCANYLNTN*GGVGKD
Trigger: ATCCTTTCCTACTCCACCCCAATTTGTATTTAGATA...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTGTAATAGGAGACACTaGAGACTAAGAATGGTTCCC +
Preference number: 2 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSCNRRH*RLRMVP
Trigger: GGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTGAAAAGAGAAAACGATaGAGGCTTATGGAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVEKRKR*RLMEER
Trigger: TCTTTCCTCCATAAGCCTCCATCGTTTTCTCTTTTC...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAATCCAGCTAATCTATaGAAACAAATCCACTCATAC +
Preference number: 2 (lower is better)
Translates to: ATALKQTFSLLDTIFCANNPANL*KQIHSY
Trigger: GTATGAGTGGATTTGTTTCCATAGATTAGCTGGATT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTTTGCACCACTACACTaGACACTGGATTTTTCATTA +
Preference number: 2 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHFAPLH*TLDFSL
Trigger: TAATGAAAAATCCAGTGTTCAGTGTAGTGGTGCAAA...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR TCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAAGAGGCCTACAGACTTaGAATCTTGTTGGCATTTTA +
Preference number: 2 (lower is better)
Translates to: STKTSLCGCVSVPLYLSARGLQT*NLVGIL
Trigger: TAAAATGCCAACAAGATTTCAAGTCTGTAGGCCTCT...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTTCATTTTGGCAATTaGAACCTAAGCAGTGATTTT +
Preference number: 2 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRLHFGN*NLSSDF
Trigger: AAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAG...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAACTCTGTCTACCTATCTaGTTAGGGATTATTTTTCTA +
Preference number: 2 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSELCLPI*LGIIFL
Trigger: TAGAAAAATAATCCCTAAGCAGATAGGTAGACAGAG...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAAAGAAGGCTTCATTTTaGCAATTGCAACCTAAGCAG +
Preference number: 2 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLKKASF*QLQPKQ
Trigger: CTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCTT...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAGAAAAGAGAAAACGATaGAGGCTTATGGAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLREKRKR*RLMEER
Trigger: TCTTTCCTCCATAAGCCTCCATCGTTTTCTCTTTTC...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGATTAAATTTCACAATGTaGTGGTCACCAACATTCATC +
Preference number: 2 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRLNFTM*WSPTFI
Trigger: GATGAATGTTGGTGACCACCACATTGTGAAATTTAA...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTGAAAAGAGAAAACGATaGAGGCTTATGGAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLEKRKR*RLMEER
Trigger: TCTTTCCTCCATAAGCCTCCATCGTTTTCTCTTTTC...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGCTTCATTTTGGCAATTaGAACCTAAGCAGTGATTTT +
Preference number: 2 (lower is better)
Translates to: RTYNSTRYSLERIKRRKELHFGN*NLSSDF
Trigger: AAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAG...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTAAACTCAATCACCTGTaGAAAGATGTCGACTTTAAA +
Preference number: 2 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSKLNHL*KDVDFK
Trigger: TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR GCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGACTCTGTCTACCTATCTaGTTAGGGATTATTTTTCTA +
Preference number: 2 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRLCLPI*LGIIFL
Trigger: TAGAAAAATAATCCCTAAGCAGATAGGTAGACAGAG...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGATATCTAAATACAAATTaGGGTGGAGTAGGAAAGGAT +
Preference number: 2 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRYLNTN*GGVGKD
Trigger: ATCCTTTCCTACTCCACCCCAATTTGTATTTAGATA...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTAATGAAGTATTGAAATaGAAGGTCCTACTTTCTTGC +
Preference number: 2 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSNEVLK*KVLLSC
Trigger: GCAAGAAAGTAGGACCTTCCATTTCAATACTTCATT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTCGTGTTAATGAAGTATaGAAATGGAAGGTCCTACTT +
Preference number: 3 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGRVNEV*KWKVLL
Trigger: AAGTAGGACCTTCCATTTCAATACTTCATTAACACG...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR TCA 72 bp CCCAGGACTCCAAATATCCTGGACAGCTCTCCCCAATaGATTTTCCACCATGAGACTAGGGTGGAACCGCTC +
Preference number: 3 (lower is better)
Translates to: PRTPNILDSSPQ*IFHHETRVEPL
Trigger: GAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCAGGATATTTGGAGTCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR TCA 72 bp CGTGCGGAAGGACGGGAGGAGACAGAGGTGAAGCAATaGGGTCAGAGAAACTCAATCACCTGTGCAAAGATG +
Preference number: 3 (lower is better)
Translates to: RAEGREETEVKQ*GQRNSITCAKM
Trigger: CATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTCACCTCTGTCTCCTCCCGTCCTTCCGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR GCA 72 bp TTAGCTTGCAGTGGTGAGCGAGACTTAGCTGTGGTTTaGCACCCCACCTCACTAGAGGCCTACAGACTTGAA +
Preference number: 3 (lower is better)
Translates to: LACSGERDLAVV*HPTSLEAYRLE
Trigger: TTCAAGTCTGTAGGCCTCTAGTGAGGTGGGGTGGCAAACCACAGCTAAGTCTCGCTCACCACTGCAAGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR CCA 72 bp TTTACGTCAACACTGTGTTCTGGGAGAGGTGTAATTTaGGCTTTCAAAAGTGGAGGTGGGCTGTGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: FTSTLCSGRGVI*AFKSGGGLWEG
Trigger: CCCCTCCCACAGCCCACCTCCACTTTTGAAAGCCCAAATTACACCTCTCCCAGAACACAGTGTTGACGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR TCA 72 bp GTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTaGACTGCTCAGCTCTGCGGCTGTAGTGTGAAAGTA +
Preference number: 3 (lower is better)
Translates to: VNVLGIVGHTVC*TAQLCGCSVKV
Trigger: TACTTTCACACTACAGCCGCAGAGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR TCA 72 bp GAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTaGACACTGGATTTTTCATTACTTCCTGTGACAGGG +
Preference number: 3 (lower is better)
Translates to: EQLYALRFAPLH*TLDFSLLPVTG
Trigger: CCCTGTCACAGGAAGTAATGAAAAATCCAGTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR TCA 72 bp TTGCTGTGTCTGTTTGGCTATAACAAGAGCCCTCTATaGACAGCTCTATGCCCTCAGGTTTGCACCACTACA +
Preference number: 3 (lower is better)
Translates to: LLCLFGYNKSPL*TALCPQVCTTT
Trigger: TGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGCCAAACAGACACAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCAGTTTGCAGCCTCATTaGTCCGTTCTGTTAGAGAAA +
Preference number: 3 (lower is better)
Translates to: MRLGWNRSHPFIFISASFSLQPH*SVLLEK
Trigger: TTTCTCTAACAGAACGGACAAATGAGGCTGCAAACT...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTAGTACAAAAACAAGTTaGTGTGGCTGTGTTTCAGTA +
Preference number: 3 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSSTKTS*CGCVSV
Trigger: TACTGAAACACAGCCACACAAACTTGTTTTTGTACT...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR TCA 72 bp GTGGAGTCAAACAGGGGAAACTTTCCTGGGGAGAGTTaGGACCTGTGTACTTTAAACCTAATGCAATCACCA +
Preference number: 3 (lower is better)
Translates to: VESNRGNFPGES*DLCTLNLMQSP
Trigger: TGGTGATTGCATTAGGTTTAAAGTACACAGGTCTCAACTCTCCCCAGGAAAGTTTCCCCTGTTTGACTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTGTTGCTGTGTCTGTTaGGCTATAACAAGAGCCCTC +
Preference number: 3 (lower is better)
Translates to: ATALKQTFSLLDTIFCANCCCVC*AITRAL
Trigger: GAGGGCTCTTGTTATAGCCAAACAGACACAGCAACA...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR TCA 72 bp CTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCATaGACCAGAAAAGCATCCTCTTCTTCCAGCATGGCC +
Preference number: 3 (lower is better)
Translates to: LSLSGRYVSTEP*TRKASSSSSMA
Trigger: GGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAAGAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
3UTR CCA 72 bp TTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTaGAGACTAAGAATGGTTCCCAGAGTGAGGCACGGA +
Preference number: 3 (lower is better)
Translates to: FYFCQLLCNRRH*RLRMVPRVRHG
Trigger: TCCGTGCCTCACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTTGCCCCAATGACCCCTaGGTTCCCTTAACTACAGAT +
Preference number: 3 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVCPNDP*VPLTTD
Trigger: ATCTGTAGTTAAGGGAACCAAGGGGTCATTGGGGCA...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR GCA 72 bp AAAGAAGTGCTTCTAAGAAGGCTTCATTTTGGCAATTaGAACCTAAGCAGTGATTTTGTGGCTAGGACTCCT +
Preference number: 3 (lower is better)
Translates to: KEVLLRRLHFGN*NLSSDFVARTP
Trigger: AGGAGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCTTAGAAGCACTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR CCA 72 bp ATATTGGGTAACTGTATTTACGTCAACACTGTGTTCTaGGAGAGGTGTAATTTGGGCTTTCAAAAGTGGAGG +
Preference number: 3 (lower is better)
Translates to: ILGNCIYVNTVF*ERCNLGFQKWR
Trigger: CCTCCACTTTTGAAAGCCCAAATTACACCTCTCCCAGAACACAGTGTTGACGTAAATACAGTTACCCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACCAACAAGATACTCGCTaGAAAGGATCAAGAGGAGAA +
Preference number: 3 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHQQDTR*KGSRGE
Trigger: TTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTG...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTGGGAGAGGTGTAATTaGGGCTTTCAAAAGTGGAGG +
Preference number: 3 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLWERCN*GFQKWR
Trigger: CCTCCACTTTTGAAAGCCCAAATTACACCTCTCCCA...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATCGTGTTAATGAAGTATaGAAATGGAAGGTCCTACTT +
Preference number: 3 (lower is better)
Translates to: ATALKQTFSLLDTIFCANRVNEV*KWKVLL
Trigger: AAGTAGGACCTTCCATTTCAATACTTCATTAACACG...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR TCA 72 bp GGGACAAAGTATCACTACACCGTGTTAATGAAGTATTaGAATGGAAGGTCCTACTTTCTTGCTAAGGCTCAA +
Preference number: 3 (lower is better)
Translates to: GTKYHYTVLMKY*NGRSYFLAKAQ
Trigger: TTGAGCCTTAGCAAGAAAGTAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATACTATCTAAATACAAATaGGGGTGGAGTAGGAAAGGA +
Preference number: 3 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQILSKYK*GWSRKG
Trigger: TCCTTTCCTACTCCACCCCAATTTGTATTTAGATAG...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTATCTAAATACAAATaGGGGTGGAGTAGGAAAGGA +
Preference number: 3 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVLSKYK*GWSRKG
Trigger: TCCTTTCCTACTCCACCCCAATTTGTATTTAGATAG...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGACAACAAGATACTCGCTaGAAAGGATCAAGAGGAGAA +
Preference number: 3 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRQQDTR*KGSRGE
Trigger: TTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTG...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAGCTGAAACAAAATCATaGGGACAAATGCCCATAATT +
Preference number: 3 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEAETKS*GQMPII
Trigger: AATTATGGGCATTTGTCCCAATGATTTTGTTTCAGC...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAACGTGTTAATGAAGTATaGAAATGGAAGGTCCTACTT +
Preference number: 3 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSERVNEV*KWKVLL
Trigger: AAGTAGGACCTTCCATTTCAATACTTCATTAACACG...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR CCA 72 bp GAAAGTAGCTGTAGACAGTACAAAAACAAGTTTGTGTaGCTGTGTTTCAGTACCACTTTATTTATCGGCACT +
Preference number: 3 (lower is better)
Translates to: ESSCRQYKNKFV*LCFSTTLFIGT
Trigger: AGTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACTGTCTACAGCTACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTATCTAAATACAAATaGGGGTGGAGTAGGAAAGGA +
Preference number: 3 (lower is better)
Translates to: STKTSLCGCVSVPLYLSALSKYK*GWSRKG
Trigger: TCCTTTCCTACTCCACCCCAATTTGTATTTAGATAG...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR CCA 72 bp CCAAACATGCAACACGGATTCTTAAATTTCACAATGTaGTGGTCACCAACATTCATCAGGAAAATGATGTTA +
Preference number: 3 (lower is better)
Translates to: PNMQHGFLNFTM*WSPTFIRKMML
Trigger: TAACATCATTTTCCTGATGAATGTTGGTGACCACCACATTGTGAAATTTAAGAATCCGTGTTGCATGTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCTATCTAAATACAAATaGGGGTGGAGTAGGAAAGGA +
Preference number: 3 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLLSKYK*GWSRKG
Trigger: TCCTTTCCTACTCCACCCCAATTTGTATTTAGATAG...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR-3UTR CAA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAGCTGAAACAAAATCATaGGGACAAATGCCCATAATT +
Preference number: 3 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRAETKS*GQMPII
Trigger: AATTATGGGCATTTGTCCCAATGATTTTGTTTCAGC...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR CCA 72 bp AACATGCAACACGGATTCTTAAATTTCACAATGTGGTaGTCACCAACATTCATCAGGAAAATGATGTTAAAA +
Preference number: 3 (lower is better)
Translates to: NMQHGFLNFTMW*SPTFIRKMMLK
Trigger: TTTTAACATCATTTTCCTGATGAATGTTGGTGACCACCACATTGTGAAATTTAAGAATCCGTGTTGCATGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGGGTAATCCGCCCGACTaGTGTCTGGCAGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRGNPPD*CLAENR
Trigger: CCTGTTTTCTGCCAGACAGCAGTCGGGCGGATTACC...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTGAAGATTGCTGGGACTaGCCAGAAGCCATGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGEDCWD*PEAMGA
Trigger: AGCACCCATGGCTTCTGGGCAGTCCCAGCAATCTTC...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTTTGCCGCACCCCCACTaGAGTCATCCCAGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGLPHPH*SHPSPN
Trigger: ATTTGGACTGGGATGACTGCAGTGGGGGTGCGGCAA...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTCATGGGTGACAGCCTaGAACGTAACTGCATCCGGG +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRSWVTA*NVTASG
Trigger: CCCGGATGCAGTTACGTTGCAGGCTGTCACCCATGA...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTGCAGCACAGCCAGCTaGGATCCAGGCAGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRCSTAS*DPGSLF
Trigger: AAACAGACTGCCTGGATCCCAGCTGGCTGTGCTGCA...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGGCTCTTGTTCTCCAATaGCCACTGTCCTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRALVLQ*PLSSKA
Trigger: GGCTTTGGAGGACAGTGGTCATTGGAGAACAAGAGC...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGATCCTCCGTGAGAAATaGCTCTCCTGTAGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRILREK*LSCRAR
Trigger: TCGAGCCCTACAGGAGAGTCATTTCTCACGGAGGAT...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS-3UTR TCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGGCTCTTGCACCAGGCTaGCTTTCAGGAGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRALAPG*LSGEKL
Trigger: CAGCTTTTCTCCTGAAAGTCAGCCTGGTGCAAGAGC...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTCGGATGATCACAGACTaGCAGCATGGTGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGRMITD*QHGVLT
Trigger: TGTCAGGACACCATGCTGCCAGTCTGTGATCATCCG...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGAAAGAATGCTACCTCTaGGGCGATGAGCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRKECYL*GDEPVA
Trigger: AGCAACTGGCTCATCGCCTCAGAGGTAGCATTCTTT...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGGATGCTGCATCACTTTaGAGGGTTTCCCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRDAASL*RVSLSV
Trigger: CACAGAGAGGGAAACCCTGCAAAGTGATGCAGCATC...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTTGGTTCCAAAATTGGTaGCATATCTGGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGWFQNW*HIWAGS
Trigger: GGAGCCAGCCCAGATATGGCACCAATTTTGGAACCA...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTTGGCAGTTGGCCACCTaGATCTCTTCCTCTATTGAC +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGWQLAT*ISSSID
Trigger: GTCAATAGAGGAAGAGATCCAGGTGGCCAACTGCCA...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTGACAGCTCTCCCCAATaGATTTTCCACCATGAGACT +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGDSSPQ*IFHHET
Trigger: AGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTC...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGACATTGGCATCCACCTaGGCCTGGTTAGAATCATTG +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRTLAST*AWLESL
Trigger: CAATGATTCTAACCAGGCTCAGGTGGATGCCAATGT...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTCCCAGGACCTGAACTaGTTCGATTTCGAGATGACT +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRSQDLN*FDFEMT
Trigger: AGTCATCTCGAAATCGAATCAGTTCAGGTCCTGGGA...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTAGGAGAAAAGCTGTCTaGTATCCAAGAACCGTCACC +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGRRKAV*YPRTVT
Trigger: GGTGACGGTTCTTGGATATCAGACAGCTTTTCTCCT...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTACGTTGGCATCGCTCTaGTCAACCGGATTAATGACT +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGTLASL*STGLMT
Trigger: AGTCATTAATCCGGTTGAGCAGAGCGATGCCAACGT...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTAGGCTGGTTCTTCAGTaGATGGCGAGCTTTCTACTA +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGRLVLQ*MASFLL
Trigger: TAGTAGAAAGCTCGCCATCCACTGAAGAACCAGCCT...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGCAGATTCCTGTTCACTaGAACTCCACGCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRQIPVH*NSTHLQ
Trigger: TTGCAGATGCGTGGAGTTCCAGTGAACAGGAATCTG...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGCAGTCTCCTCTGCCGTaGAGTTACCATCTTTTGACT +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRQSPLP*SYHLLT
Trigger: AGTCAAAAGATGGTAACTCCACGGCAGAGGAGACTG...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTTGCTTGATAGCCAATTaGAGGCAGCACAGTTGCGTT +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGCLIAN*RQHSCV
Trigger: AACGCAACTGTGCTGCCTCCAATTGGCTATCAAGCA...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTACCTTCCAGAAAGGGTaGCTGATGGTTGTCACTAAA +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGTFQKG*LMVVTK
Trigger: TTTAGTGACAACCATCAGTCACCCTTTCTGGAAGGT...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTAGCTTTGAGAAACAATaGTTTTGCCCCAATGACCCC +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGSFEKQ*FCPNDP
Trigger: GGGGTCATTGGGGCAAAAGCATTGTTTCTCAAAGCT...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTCAAAATGTTGGAGCCTaGTCCTACCGGCAAATAAAC +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGQNVGA*SYRQIN
Trigger: GTTTATTTGCCGGTAGGAGCAGGCTCCAACATTTTG...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGCCTCCTTCTTGGGGTTaGACCATTCAAGTACACAAT +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRPPSWG*TIQVHN
Trigger: ATTGTGTACTTGAATGGTGCAACCCCAAGAAGGAGG...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGGGGAGAGGTGTAATTTaGGCTTTCAAAAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRGRGVI*AFKSGG
Trigger: ACCTCCACTTTTGAAAGCCCAAATTACACCTCTCCC...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTAGGCTCTCCTATCAATaGAGCTTGGCTTATGCTCTT +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGRLSYQ*SLAYAL
Trigger: AAGAGCATAAGCCAAGCTCCATTGATAGGAGAGCCT...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGGTTTTACACCTTGTGTaGTTTGTGGCTGTCCTAGTC +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRVLHLV*FVAVLV
Trigger: GACTAGGACAGCCACAAACCACACAAGGTGTAAAAC...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAGTGTGTGTGGGCACGTaGGGAAGGACGGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTEVCVGT*GRTGGD
Trigger: GTCTCCTCCCGTCCTTCCGCACGTGCCCACACACAC...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAACCGCCCCTTCAGGGATaGGGCTGTAGGAGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTEPPLQG*GCRSQA
Trigger: GGCTTGACTCCTACAGCCCCATCCCTGAAGGGGCGG...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTATTCATGGGTGTTGGTaGGATCCTCTTTCCAGTATT +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGIHGCW*DPLSSI
Trigger: AATACTGGAAAGAGGATCCCACCAACACCCATGAAT...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCACCCAGGGCTCGGGCATaGCTGTGGGAGAGCGACCAG +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSPRARA*LWESDQ
Trigger: CTGGTCGCTCTCCCACAGCCATGCCCGAGCCCTGGG...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTGTCTTGCTGCTTGTTaGGTGCAAATTCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRCLAAC*VQIPGI
Trigger: AATACCTGGAATTTGCACCCAACAAGCAGCAAGACA...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGCAAGTTCATCCACATTaGTGTCAATTTCATCTGGAC +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRQVHPH*CQFHLD
Trigger: GTCCAGATGAAATTGACATCAATGTGGATGAACTTG...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTAACAAGATACTCGCTTaGAAGGATCAAGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGNKILA*KDQEEK
Trigger: TTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTT...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGGGGAGCTGTCCTTCTaGCAGGTCACTGTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSGELSF*QVTVGE
Trigger: TTCCCCAACAGTGACCTGTCAGAAGGACAGCTCCCC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGCTGTCAGGGGCCGTCTaGCGGGAGTTGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVLSGAV*RELVLL
Trigger: CAGCAGCACCAACTCCCGGCAGACGGCCCCTGACAG...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTAGCCTGCAACGTAACTaGATCCGGGCCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLSLQRN*IRASPA
Trigger: GGCAGGGCTGGCCCGGATGCAGTTACGTTGCAGGCT...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGAAGAAGGCTTCATTTTaGCAATTGCAACCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRKKASF*QLQPKQ
Trigger: CTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCTT...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTTGCATGGGTCTGAGGTaGCCCCATGTGACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSCMGLR*PHVTCV
Trigger: GACACAGGTCACATGGGGCCACCTCAGACCCATGCA...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGCAAAGATGTGATCCCTaGAGTCATTGTTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRQRCDP*SHCFSC
Trigger: GCAAGAAAAACAATGACTCCAGGGATCACATCTTTG...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTTGGGGTCGTCGTAACTaGACTGGCTGCTTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSWGRRN*TGCFPR
Trigger: TCGGGGAAAGCAGCCAGTCCAGTTACGACGACCCCA...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGGTTCCAGAGGCTGCTaGCGCATCTGGGGAATGAGT +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSGSRGC*RIWGMS
Trigger: ACTCATTCCCCAGATGCGCCAGCAGCCTCTGGAACC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTTTGATGATGCTCTCTaGAATGTGGATGCAATCCAT +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRFDDAL*NVDAIH
Trigger: ATGGATTGCATCCACATTCCAGAGAGCATCATCAAA...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGAATGGTTCCCAGAGTaGGGCACGGACTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSEWFPE*GTDFSQ
Trigger: TTGGCTGAAGTCCGTGCCTCACTCTGGGAACCATTC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTTTTGCACCACTACACTaGACACTGGATTTTTCATTA +
Preference number: 4 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGFAPLH*TLDFSL
Trigger: TAATGAAAAATCCAGTGTTCAGTGTAGTGGTGCAAA...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAACGGCTGCTGCTCCTCTaGCAGATAGCTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTERLLLL*QIAGEQ
Trigger: CTGTTCTCCAGCTATCTGTCAGAGGAGCAGCAGCCG...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTCCAGCTGCTGCACCGTaGATGGGTCTGAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSPAAAP*MGLRWP
Trigger: GGGCCACCTCAGACCCATGCACGGTGCAGCAGCTGG...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGCTGTTTGCAATTAGCTaGCCACTTTTCTCATTCAAT +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRLFAIS*PLFSFN
Trigger: ATTGAATGAGAAAAGTGGGCAGCTAATTGCAAACAG...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGGATGTCAATTTCATCTaGACTGTCCAAGTTATCATC +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRDVNFI*TVQVII
Trigger: GATGATAACTTGGACAGTCCAGATGAAATTGACATC...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTACTCCAGGCTGGGAATaGCGCCACAGCTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGTPGWE*RHSCWF
Trigger: GAACCAGCAGCTGTGGCGCCATTCCCAGCCTGGAGT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAACTGTTTGACCATCACTaGGGATTGCCGCACCCCCAC +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTELFDHH*GLPHPH
Trigger: GTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAG...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGCCCCCTGTCAGTaGCTCCCTGGGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSGAPCQ*LPGLPS
Trigger: AGAAGGAAGCCCAGGGAGCCACTGACAGGGGGCACC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTCAGCAACGTGGCAGTTaGCCACCTGGATCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSQQRGS*PPGSLP
Trigger: AGGAAGAGATCCAGGTGGCCAACTGCCACGTTGCTG...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTTGCAGCACAGCCAGCTaGGATCCAGGCAGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSCSTAS*DPGSLF
Trigger: AAACAGACTGCCTGGATCCCAGCTGGCTGTGCTGCA...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGACTGTTGCAGTGACTaGGGAGGAATGTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSDCCSD*GGMSVS
Trigger: GGAGACTGACATTCCTCCTCAGTCACTGCAACAGTC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGTCCCATGCAAGCACTaGGGTGCTTCTCAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSVPCKH*GASQSL
Trigger: AAGAGACTGAGAAGCACCTCAGTGCTTGCATGGGAC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGGATGTGTTGAGACCTaGGGCATCGCTGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSGCVET*GIAETV
Trigger: CACAGTTTCAGCGATGCCTCAGGTCTCAACACATCC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTCCACGAGGCTTCAGATaGGCAGATATCTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSPRGFR*ADILLP
Trigger: GGGAAGCAAGATATCTGCTCATCTGAAGCCTCGTGG...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACCCGACTGCTCCCTCCTaGCGCTCTGAGGCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHPTAPS*RSEAAA
Trigger: CGCAGCCGCCTCAGAGCGGCAGGAGGGAGCAGTCGG...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376718.8
CDS-3UTR GCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGGCAAACCCACTTTTTaGCATGGCCCACTCATTCGG +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSGKPTF*HGPLIR
Trigger: CCGAATGAGTGGGCCATGGCAAAAAGTGGGTTTGCC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTCATCCGGGCCAGCCCTaGCTCGGCTCTTACTCTTCT +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAHPGQP*LGSYSS
Trigger: AGAAGAGTAAGAGCCGAGGCAGGGCTGGCCCGGATG...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGACTTAGCTGTGGTTTaGCACCCCACCTCACTAGAG +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSDLAVV*HPTSLE
Trigger: CTCTAGTGAGGTGGGGTGGCAAACCACAGCTAAGTC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCGCCCGACTGCTGTCTaGCAGAAAACAGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGRPTAV*QKTGGK
Trigger: TTTGCCGCCTGTTTTCTGCCAGACAGCAGTCGGGCG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGTCGTGGCTAGGGGTTTaGAACCCGGGTACTCGGAGG +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVSWLGV*NPGTRR
Trigger: CCTCCGAGTACCCGGGTTCCAAACCCCTAGCCACGA...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATCGTGGCTAGGGGTTTaGAACCCGGGTACTCGGAGG +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSSWLGV*NPGTRR
Trigger: CCTCCGAGTACCCGGGTTCCAAACCCCTAGCCACGA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTTCCATGGGCAGGTTCTaGAACGGCAAGCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSSMGRF*NGKLSS
Trigger: TGAGGAAAGCTTGCCGTTCCAGAACCTGCCCATGGA...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAACCCAGGGCTCGGGCATaGCTGTGGGAGAGCGACCAG +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKPRARA*LWESDQ
Trigger: CTGGTCGCTCTCCCACAGCCATGCCCGAGCCCTGGG...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGCCAGAACTGGGTTGCTaGCCCCAGGAGGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVPELGC*PQEDSA
Trigger: TGCACTGTCCTCCTGGGGCCAGCAACCCAGTTCTGG...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAATCGGGAGTCCTCACTTaGGGTAGAGCCATCCCATTC +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTESGVLT*GRAIPF
Trigger: GAATGGGATGGCTCTACCCCAAGTGAGGACTCCCGA...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTTTGAGGCACATAATTaGCAAAATAGGAAAGTACAC +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRFEAHN*QNRKVH
Trigger: GTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAA...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGAATCCAGCTAATCTATaGAAACAAATCCACTCATAC +
Preference number: 4 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRNPANL*KQIHSY
Trigger: GTATGAGTGGATTTGTTTCCATAGATTAGCTGGATT...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAATCCTGTAGGGCTCGATaGCCTTCATGTCAATGCGCT +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTESCRAR*PSCQCA
Trigger: AGCGCATTGACATGAAGGTCATCGAGCCCTACAGGA...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTGGAGGAAAGAGGGCTaGACTGCGTGTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAWRKEG*TACVWA
Trigger: TGCCCACACACACGCAGTTCAGCCCTCTTTCCTCCA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAAGAGCTCTCCTTGGATaGGCGGCTGCTCCTAATGGT +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLRALLG*AAAPNG
Trigger: ACCATTAGGAGCAGCCGCTCATCCAAGGAGAGCTCT...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTCGGGGCTGTCGTCACTaGGGAAAACAGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSARGCRH*GKQSSP
Trigger: AGGAGAGCTCTGTTTTCCTCAGTGACGACAGCCCCG...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGGGAGAAGGGTGTGGTaGGGCCCAGCACCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSGRRVW*GPAPSP
Trigger: GGGAGAAGGTGCTGGGCCTCACCACACCCTTCTCCC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAACTACCCAGTTCAGGCTaGCCAAATTCAGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTELPSSG*PNSDSQ
Trigger: CTGGGAGTCTGAATTTGGTCAGCCTGAACTGGGTAG...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACTTCGGGGAACTCTGTaGGGTGGCCCTCCACCCACG +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPALRGTL*GGPPPT
Trigger: CGTGGGTGGAGGGCCACCTCACAGAGTTCCCCGAAG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTTCTGGCTGCCTTGGTTaGATGTTCCAGAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSSGCLG*MFQSCS
Trigger: TGAGCAACTCTGGAACATTCAACCAAGGCAGCCAGA...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCAAGGCTGTGTCCGGATaGTCACAGACTGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFKAVSG*SQTGSM
Trigger: CATGCTGCCAGTCTGTGATCATCCGGACACAGCCTT...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTCTATTTTCCTCTGCGTaGGTAAAGGCTGTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSLFSSA*VKAVSG
Trigger: TCCGGACACAGCCTTTACTCACGCAGAGGAAAATAG...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCGGGCTGTCGGAAGCCTaGGAATTGCTGTCATGTTCG +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFGLSEA*ELLSCS
Trigger: CGAACATGACAGCAATTCTCAGGCTTCCGACAGCCC...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTTTTAAGGAGGCTGGCTaGCATGTGTCTGGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSFKEAG*HVSGKL
Trigger: AAGCTTCCCAGACACATGTCAGCCAGCCTCCTTAAA...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTTCAGGCCTCATGTCTaGAGCACTGGGACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGFRPHV*STGTQH
Trigger: GTGCTGAGTCCCAGTGCTGCAGACATGAGGCCTGAA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTGTGTGTGTGGGCACGTaGGGAAGGACGGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTVCVGT*GRTGGD
Trigger: GTCTCCTCCCGTCCTTCCGCACGTGCCCACACACAC...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTCCCAGAAGCCATGGGTaGTGGGTCAAAATTGAAGAG +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSPRSHG*WVKIEE
Trigger: CTCTTCAATTTTGACCCAGCACCCATGGCTTCTGGG...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAAACCACCCCACCAGCTaGTGCACCGTGCATGGGTCT +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPNHPTS*CTVHGS
Trigger: AGACCCATGCACGGTGCAGCAGCTGGTGGGGTGGTT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCGTAACTGGACTGGCTaGTTTCCCCGACGTCATCCT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGRNWTG*FPRRHP
Trigger: AGGATGACGTCGGGGAAAGCAGCCAGTCCAGTTACG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTCTGTCAGGGGCCGTCTaGCGGGAGTTGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVLSGAV*RELVLL
Trigger: CAGCAGCACCAACTCCCGGCAGACGGCCCCTGACAG...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGTCCTCTTCATCAAGGTaGCCCCTGTCAGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVSSSSR*PLSVAP
Trigger: GGGAGCCACTGACAGGGGGCACCTTGATGAAGAGGA...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTCATGGGTGACAGCCTaGAACGTAACTGCATCCGGG +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGSWVTA*NVTASG
Trigger: CCCGGATGCAGTTACGTTGCAGGCTGTCACCCATGA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTCATGTCTGCAGCACTaGGACTCAGCACGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFSCLQH*DSARPL
Trigger: AAGAGGGCGTGCTGAGTCCCAGTGCTGCAGACATGA...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGCGCCCGACTGCTGTCTaGCAGAAAACAGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVRPTAV*QKTGGK
Trigger: TTTGCCGCCTGTTTTCTGCCAGACAGCAGTCGGGCG...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCACGCCCGACTGCTGTCTaGCAGAAAACAGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSRPTAV*QKTGGK
Trigger: TTTGCCGCCTGTTTTCTGCCAGACAGCAGTCGGGCG...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTGGCTGTGGGAGGGGGTaGGCTGTAGGGTTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAGCGRG*AVGFFC
Trigger: ACAGAAAAACCCTACAGCCCACCCCCTCCCACAGCC...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTCTCGGAGGGGCGCAGTaGAAAATCTCGGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSLGGAQ*KISAQG
Trigger: TCCTTGGGCCGAGATTTTCCACTGCGCCCCTCCGAG...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCGTGGCTAGGGGTTTaGAACCCGGGTACTCGGAGG +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSSWLGV*NPGTRR
Trigger: CCTCCGAGTACCCGGGTTCCAAACCCCTAGCCACGA...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGGTAGGAGTCAAGCCCTaGGAGAAGGGTGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVVGVKP*EKGVVR
Trigger: CCTCACCACACCCTTCTCCCAGGGCTTGACTCCTAC...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCACCCAGGGCTCGGGCATaGCTGTGGGAGAGCGACCAG +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPPRARA*LWESDQ
Trigger: CTGGTCGCTCTCCCACAGCCATGCCCGAGCCCTGGG...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTGGCGCCACAGCTGCTaGTTCACCATCATCTGTAGG +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGWRHSC*FTIICR
Trigger: CCTACAGATGATGGTGAACCAGCAGCTGTGGCGCCA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAACTCCAGGCTGGGAATaGCGCCACAGCTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPTPGWE*RHSCWF
Trigger: GAACCAGCAGCTGTGGCGCCATTCCCAGCCTGGAGT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAAAATGCACTCCAGGCTaGGAATGGCGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSKCTPG*EWRHSC
Trigger: GCAGCTGTGGCGCCATTCCCAGCCTGGAGTGCATTT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTGGGGTCGTCGTAACTaGACTGGCTGCTTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAWGRRN*TGCFPR
Trigger: TCGGGGAAAGCAGCCAGTCCAGTTACGACGACCCCA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCCCGTCTGCCGGGAGTTaGTGCTGCTGTGCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALPSAGS*CCCAKV
Trigger: CACTTTTGCACAGCAGCACCAACTCCCGGCAGACGG...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTGTGCCTCTGATTCACTaGTTCCAGAGGCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAVPLIH*FQRLLA
Trigger: CGCCAGCAGCCTCTGGAACCAGTGAATCAGAGGCAC...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTGGGAACTCTGTGAGGTaGCCCTCCACCCACGTTCTC +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSGNSVR*PSTHVL
Trigger: GAGAACGTGGGTGGAGGGCCACCTCACAGAGTTCCC...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTATTAGTCTCCCTTCCTaGGGTGAGGCCTTCCACCAC +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGISLPS*GEAFHH
Trigger: GTGGTGGAAGGCCTCACCCCAGGAAGGGAGACTAAT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTCGGGAGTCCTCACTTaGGGTAGAGCCATCCCATTC +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGSGVLT*GRAIPF
Trigger: GAATGGGATGGCTCTACCCCAAGTGAGGACTCCCGA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTAGAACCGTCACCTTCTaGAGTTGGCTCTTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSRTVTF*SWLLVS
Trigger: ACTCACCAAGAGCCAACTCCAGAAGGTGACGGTTCT...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGCTCTTGTTCTCCAATaGCCACTGTCCTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGALVLQ*PLSSKA
Trigger: GGCTTTGGAGGACAGTGGTCATTGGAGAACAAGAGC...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTCCTGTAGGGCTCGATaGCCTTCATGTCAATGCGCT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFSCRAR*PSCQCA
Trigger: AGCGCATTGACATGAAGGTCATCGAGCCCTACAGGA...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTAGGCGGCAAACACAATaGTGGCATTTAGACCGTCCC +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLRRQTQ*WHLDRP
Trigger: GGGACGGTCTAAATGCCATCATTGTGTTTGCCGCCT...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCATGGAGGAAAGAGGGCTaGACTGCGTGTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPWRKEG*TACVWA
Trigger: TGCCCACACACACGCAGTTCAGCCCTCTTTCCTCCA...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAATTAAACCCTGAGCACTaGACTGGGTCTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTELNPEH*TGSPVG
Trigger: TCCTACAGGAGACCCAGTTCAGTGCTCAGGGTTTAA...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTCTGGAGGGTTCTCTATaGAATTCACAGAGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSLEGSL*NSQSWV
Trigger: AACCCAGCTCTGTGAATTTCATAGAGAACCCTCCAG...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGGCGCATCTGGGGAATaGGTGTCTTTAACATTTGCT +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSGASGE*VSLTFA
Trigger: AGCAAATGTTAAAGACACTCATTCCCCAGATGCGCC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTCTCAGTGCTATCAGCTaGGAAGCCCAGCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLLSAIS*EAQHFQ
Trigger: CTGGAAATGCTGGGCTTCTCAGCTGATAGCACTGAG...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAAAGGCTGTGTCCGGATaGTCACAGACTGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSKAVSG*SQTGSM
Trigger: CATGCTGCCAGTCTGTGATCATCCGGACACAGCCTT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGGCTGTCGGAAGCCTaGGAATTGCTGTCATGTTCG +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSGLSEA*ELLSCS
Trigger: CGAACATGACAGCAATTCTCAGGCTTCCGACAGCCC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCGTCCCATGCAAGCACTaGGGTGCTTCTCAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFVPCKH*GASQSL
Trigger: AAGAGACTGAGAAGCACCTCAGTGCTTGCATGGGAC...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAGGTAACCTCTGGAGCTaGGTTTATGGCCTGAAACTC +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTEGNLWS*VYGLKL
Trigger: GAGTTTCAGGCCATAAACTCAGCTCCAGAGGTTACC...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCACTCGCCAGCACACTaGTGCCAACAAGTGTTATCG +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGHSPAH*CQQVLS
Trigger: CGATAACACTTGTTGGCAGCAGTGTGCTGGCGAGTG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTACGTTGGCATCGCTCTaGTCAACCGGATTAATGACT +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSTLASL*STGLMT
Trigger: AGTCATTAATCCGGTTGAGCAGAGCGATGCCAACGT...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGAAGATTGCTGGGACTaGCCAGAAGCCATGGGTGCT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSEDCWD*PEAMGA
Trigger: AGCACCCATGGCTTCTGGGCAGTCCCAGCAATCTTC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCGGGGAAGAAGTCATCTaGTGGGGAGTAGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFGEEVI*WGVVCR
Trigger: TCTGCAGACTACTCCCCAGCAGATGACTTCTTCCCC...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAACCACAAGGCTATCTTTaGCAGCCCCTGACAAAAGTG +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTEPQGYL*QPLTKV
Trigger: CACTTTTGTCAGGGGCTGGCAAAGATAGCCTTGTGG...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATAACCACCCCACCAGCTaGTGCACCGTGCATGGGTCT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYNHPTS*CTVHGS
Trigger: AGACCCATGCACGGTGCAGCAGCTGGTGGGGTGGTT...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGCTGTCAGGGGCCGTCTaGCGGGAGTTGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLLSGAV*RELVLL
Trigger: CAGCAGCACCAACTCCCGGCAGACGGCCCCTGACAG...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGACCATCACTGGGGATTaGCGCACCCCCACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALTITGD*RTPTAV
Trigger: GACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGT...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCCTTCCACCACTCAGTaGTATCAGCTGAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGPSTTQ*YQLRSP
Trigger: TGGGCTTCTCAGCTGATAGCACTGAGTGGTGGAAGG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAATTTCTTCCAGAATCTaGAGCTGGGGACCCTCACCC +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLISSRI*SWGPSP
Trigger: GGGTGAGGGTCCCCAGCTGCAGATTCTGGAAGAAAT...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATCATCCGGGCCAGCCCTaGCTCGGCTCTTACTCTTCT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYHPGQP*LGSYSS
Trigger: AGAAGAGTAAGAGCCGAGGCAGGGCTGGCCCGGATG...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAAGCCTGCAACGTAACTaGATCCGGGCCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPASLQRN*IRASPA
Trigger: GGCAGGGCTGGCCCGGATGCAGTTACGTTGCAGGCT...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATCATGGGTGACAGCCTaGAACGTAACTGCATCCGGG +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSSWVTA*NVTASG
Trigger: CCCGGATGCAGTTACGTTGCAGGCTGTCACCCATGA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGTCATGTCTGCAGCACTaGGACTCAGCACGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVSCLQH*DSARPL
Trigger: AAGAGGGCGTGCTGAGTCCCAGTGCTGCAGACATGA...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTCTCGGAGGGGCGCAGTaGAAAATCTCGGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTLGGAQ*KISAQG
Trigger: TCCTTGGGCCGAGATTTTCCACTGCGCCCCTCCGAG...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAACCGCCCCTTCAGGGATaGGGCTGTAGGAGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKPPLQG*GCRSQA
Trigger: GGCTTGACTCCTACAGCCCCATCCCTGAAGGGGCGG...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTATCCATGGGCAGGTTCTaGAACGGCAAGCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLSMGRF*NGKLSS
Trigger: TGAGGAAAGCTTGCCGTTCCAGAACCTGCCCATGGA...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGCTCGGGCATGGCTGTaGGAGAGCGACCAGAATGCC +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVARAWL*ESDQNA
Trigger: GGCATTCTGGTCGCTCTCCCACAGCCATGCCCGAGC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAGCTCGGGCATGGCTGTaGGAGAGCGACCAGAATGCC +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKARAWL*ESDQNA
Trigger: GGCATTCTGGTCGCTCTCCCACAGCCATGCCCGAGC...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGTGGCGCCACAGCTGCTaGTTCACCATCATCTGTAGG +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVWRHSC*FTIICR
Trigger: CCTACAGATGATGGTGAACCAGCAGCTGTGGCGCCA...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAAAATGCACTCCAGGCTaGGAATGGCGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPKCTPG*EWRHSC
Trigger: GCAGCTGTGGCGCCATTCCCAGCCTGGAGTGCATTT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAACCCACTTTTTGCCATaGCCCACTCATTCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSTHFLP*PTHSGP
Trigger: GGGACCCGAATGAGTGGGCCATGGCAAAAAGTGGGT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTCTGTTTGACCATCACTaGGGATTGCCGCACCCCCAC +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSLFDHH*GLPHPH
Trigger: GTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAG...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTGGCTGCTGGCGCATCTaGGGAATGAGTGTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLGCWRI*GMSVFN
Trigger: GTTAAAGACACTCATTCCCCAGATGCGCCAGCAGCC...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAGGTGCCCCCTGTCAGTaGCTCCCTGGGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRGAPCQ*LPGLPS
Trigger: AGAAGGAAGCCCAGGGAGCCACTGACAGGGGGCACC...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGGGAACTCTGTGAGGTaGCCCTCCACCCACGTTCTC +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWGNSVR*PSTHVL
Trigger: GAGAACGTGGGTGGAGGGCCACCTCACAGAGTTCCC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGGGAACTCTGTGAGGTaGCCCTCCACCCACGTTCTC +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYGNSVR*PSTHVL
Trigger: GAGAACGTGGGTGGAGGGCCACCTCACAGAGTTCCC...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATCCAGAACTGGGTTGCTaGCCCCAGGAGGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANPELGC*PQEDSA
Trigger: TGCACTGTCCTCCTGGGGCCAGCAACCCAGTTCTGG...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATCCAGAACTGGGTTGCTaGCCCCAGGAGGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYPELGC*PQEDSA
Trigger: TGCACTGTCCTCCTGGGGCCAGCAACCCAGTTCTGG...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGACCCTGGCATCCTCTaGCTGCACAGTTGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGDPGIL*LHSCRN
Trigger: ATTTCTGCAACTGTGCAGCCAGAGGATGCCAGGGTC...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCCACAGACTGGCAGCATaGTGTCCTGACACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFHRLAA*CPDTAL
Trigger: AAGAGCAGTGTCAGGACACCATGCTGCCAGTCTGTG...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACGGATGATCACAGACTaGCAGCATGGTGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLRMITD*QHGVLT
Trigger: TGTCAGGACACCATGCTGCCAGTCTGTGATCATCCG...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTAATCGAGTTCTGCATTaGATGGGACAAACTCCCGTC +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSNRVLH*MGQTPV
Trigger: GACGGGAGTTTGTCCCATCCAATGCAGAACTCGATT...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTCTTGCTGGCACCATTTaGTGGTCCTATGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLLAGTI*WSYVST
Trigger: GGTGGAGACATAGGACCACCAAATGGTGCCAGCAAG...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTCCAGAATCTGCAGCTaGGGACCCTCACCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGSRICS*GPSPKP
Trigger: CGGCTTGGGTGAGGGTCCCCAGCTGCAGATTCTGGA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
3UTR CAA 72 bp ATTTACGTCAACACTGTGTTCTGGGAGAGGTGTAATTaGGGCTTTCAAAAGTGGAGGTGGGCTGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: IYVNTVFWERCN*GFQKWRWAVGG
Trigger: CCCTCCCACAGCCCACCTCCACTTTTGAAAGCCCAAATTACACCTCTCCCAGAACACAGTGTTGACGTAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCCTTTCTAACGGAGGGTaGGAAGGATGCACGACTACA +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFLSNGG*EGCTTT
Trigger: TGTAGTCGTGCATCCTTCTCACCCTCCGTTAGAAAG...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223609.10
ENST00000376717.6
CDS-3UTR TCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGTCCTGTAGGGCTCGATaGCCTTCATGTCAATGCGCT +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVSCRAR*PSCQCA
Trigger: AGCGCATTGACATGAAGGTCATCGAGCCCTACAGGA...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCTCCTGTAGGGCTCGATaGCCTTCATGTCAATGCGCT +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALSCRAR*PSCQCA
Trigger: AGCGCATTGACATGAAGGTCATCGAGCCCTACAGGA...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATCCTGTAGGGCTCGATaGCCTTCATGTCAATGCGCT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSSCRAR*PSCQCA
Trigger: AGCGCATTGACATGAAGGTCATCGAGCCCTACAGGA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAAGGCGGCAAACACAATaGTGGCATTTAGACCGTCCC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSRRQTQ*WHLDRP
Trigger: GGGACGGTCTAAATGCCATCATTGTGTTTGCCGCCT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTTGGAGGAAAGAGGGCTaGACTGCGTGTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTWRKEG*TACVWA
Trigger: TGCCCACACACACGCAGTTCAGCCCTCTTTCCTCCA...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTCGGCTGCTGCTCCTCTaGCAGATAGCTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMARLLLL*QIAGEQ
Trigger: CTGTTCTCCAGCTATCTGTCAGAGGAGCAGCAGCCG...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATCGGCTGCTGCTCCTCTaGCAGATAGCTGGAGAACAG +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANRLLLL*QIAGEQ
Trigger: CTGTTCTCCAGCTATCTGTCAGAGGAGCAGCAGCCG...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTACAACGAGAACCACCTaGTCACAAGTCACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGTTRTT*SQVTEG
Trigger: CCCTTCAGTGACTTGTGATCAGGTGGTTCTCGTTGT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAACAACGAGAACCACCTaGTCACAAGTCACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLTTRTT*SQVTEG
Trigger: CCCTTCAGTGACTTGTGATCAGGTGGTTCTCGTTGT...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTAGAGCTCTCCTTGGATaGGCGGCTGCTCCTAATGGT +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSRALLG*AAAPNG
Trigger: ACCATTAGGAGCAGCCGCTCATCCAAGGAGAGCTCT...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGGGAGAAGGGTGTGGTaGGGCCCAGCACCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLGRRVW*GPAPSP
Trigger: GGGAGAAGGTGCTGGGCCTCACCACACCCTTCTCCC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTGGGAGAAGGGTGTGGTaGGGCCCAGCACCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSGRRVW*GPAPSP
Trigger: GGGAGAAGGTGCTGGGCCTCACCACACCCTTCTCCC...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGGGGAGCTGTCCTTCTaGCAGGTCACTGTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYGELSF*QVTVGE
Trigger: TTCCCCAACAGTGACCTGTCAGAAGGACAGCTCCCC...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTCTGGTTCCTCGGTTTaGGGACTGAAAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFSGSSV*GLKVTA
Trigger: TGCTGTCACTTTCAGTCCTCAAACCGAGGAACCAGA...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGCTTCGGGGAACTCTGTaGGGTGGCCCTCCACCCACG +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKELRGTL*GGPPPT
Trigger: CGTGGGTGGAGGGCCACCTCACAGAGTTCCCCGAAG...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGACTTCGGGGAACTCTGTaGGGTGGCCCTCCACCCACG +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRLRGTL*GGPPPT
Trigger: CGTGGGTGGAGGGCCACCTCACAGAGTTCCCCGAAG...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCACTGAGCTTGTTGAAATaGCCCTGGCATCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSLSLLK*PWHPLA
Trigger: AGCCAGAGGATGCCAGGGTCATTTCAACAAGCTCAG...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAGATCTCTTCCTCTATTaGCTCTTCACCACCGACACT +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTEDLFLY*LFTTDT
Trigger: AGTGTCGGTGGTGAAGAGTCAATAGAGGAAGAGATC...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTCTGGCTGCCTTGGTTaGATGTTCCAGAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGSGCLG*MFQSCS
Trigger: TGAGCAACTCTGGAACATTCAACCAAGGCAGCCAGA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTATTTTACAAGCTGGCTaGACTTGTCAGCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSILQAG*TCQHLG
Trigger: ACCCAGATGCTGACAAGTTCAGCCAGCTTGTAAAAT...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATGGCAGCATGGTGTCCTaGCACTGCTCTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANGSMVS*HCSWVG
Trigger: ACCTACCCAAGAGCAGTGTCAGGACACCATGCTGCC...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAGACCTGAGGCATCGCTaGAACTGTGGTCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPDLRHR*NCGQRQ
Trigger: CTGCCTTTGACCACAGTTTCAGCGATGCCTCAGGTC...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCACCACGAGGCTTCAGATaGGCAGATATCTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSPRGFR*ADILLP
Trigger: GGGAAGCAAGATATCTGCTCATCTGAAGCCTCGTGG...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCCCACGAGGCTTCAGATaGGCAGATATCTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALPRGFR*ADILLP
Trigger: GGGAAGCAAGATATCTGCTCATCTGAAGCCTCGTGG...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATCTTCTGTGATTGGCTaGCTGGACCAGAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSSSVIG*LDQRLP
Trigger: AGGAAGCCTCTGGTCCAGTCAGCCAATCACAGAAGA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCACTCCTCCGTGAGAAATaGCTCTCCTGTAGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPLLREK*LSCRAR
Trigger: TCGAGCCCTACAGGAGAGTCATTTCTCACGGAGGAG...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAGGTAATCCGCCCGACTaGTGTCTGGCAGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPGNPPD*CLAENR
Trigger: CCTGTTTTCTGCCAGACAGCAGTCGGGCGGATTACC...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAACTATGCCCTCAGGTTTaGACCACTACACTGAACACT +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTELCPQV*TTTLNT
Trigger: AGTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAG...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACCCAGAAGCCATGGGTaGTGGGTCAAAATTGAAGAG +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLPRSHG*WVKIEE
Trigger: CTCTTCAATTTTGACCCAGCACCCATGGCTTCTGGG...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTACATGTTGGTTCCCATaGCATCAAGTCCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGTCWFP*HQVLQA
Trigger: GGCCTGAAGGACTTGATGGCATGGGAACCAACATGT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACCAGCTGCTGCACCGTaGATGGGTCTGAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAPAAAP*MGLRWP
Trigger: GGGCCACCTCAGACCCATGCACGGTGCAGCAGCTGG...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGCTGTCAGGGGCCGTCTaGCGGGAGTTGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKELSGAV*RELVLL
Trigger: CAGCAGCACCAACTCCCGGCAGACGGCCCCTGACAG...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAACCATCACTGGGGATTaGCGCACCCCCACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRTITGD*RTPTAV
Trigger: GACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGT...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCACCTAGTCGCCAAGGATaGTGCATCACTTTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSPSRQG*CITLQG
Trigger: ACCCTGCAAAGTGATGCAGCATCCTTGGCGACTAGG...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTGGCTGCAGGTTATCTaGGGACATCCCTGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAWLQVI*GHPCLH
Trigger: GTGCAAACAGGGATGTCCGCAGATAACCTGCAGCCA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTCGGAAGCCTGAGAATTaGTGTCATGTTCGCAGTGCG +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSARKPEN*CHVRSA
Trigger: CGCACTGCGAACATGACAGCAATTCTCAGGCTTCCG...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAAGAAAGCACTATCTCTaGTGCTCTGCATCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTERKHYL*CSASQR
Trigger: TCTCTGGGATGCAGAGCAGCAGAGATAGTGCTTTCT...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAACATCCGGGCCAGCCCTaGCTCGGCTCTTACTCTTCT +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKHPGQP*LGSYSS
Trigger: AGAAGAGTAAGAGCCGAGGCAGGGCTGGCCCGGATG...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAAGCCTGCAACGTAACTaGATCCGGGCCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTESLQRN*IRASPA
Trigger: GGCAGGGCTGGCCCGGATGCAGTTACGTTGCAGGCT...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTCCTCCTTCTTGGGGTTaGACCATTCAAGTACACAAT +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSPPSWG*TIQVHN
Trigger: ATTGTGTACTTGAATGGTGCAACCCCAAGAAGGAGG...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCGACTTAGCTGTGGTTTaGCACCCCACCTCACTAGAG +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALDLAVV*HPTSLE
Trigger: CTCTAGTGAGGTGGGGTGGCAAACCACAGCTAAGTC...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTGACTTAGCTGTGGTTTaGCACCCCACCTCACTAGAG +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSADLAVV*HPTSLE
Trigger: CTCTAGTGAGGTGGGGTGGCAAACCACAGCTAAGTC...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCATGTCTGCAGCACTaGGACTCAGCACGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSSCLQH*DSARPL
Trigger: AAGAGGGCGTGCTGAGTCCCAGTGCTGCAGACATGA...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGGCTGTGGGAGGGGGTaGGCTGTAGGGTTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGGCGRG*AVGFFC
Trigger: ACAGAAAAACCCTACAGCCCACCCCCTCCCACAGCC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGGGCTGTGGGAGGGGGTaGGCTGTAGGGTTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALGCGRG*AVGFFC
Trigger: ACAGAAAAACCCTACAGCCCACCCCCTCCCACAGCC...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCATTGGGCTTTCAAAAGTaGAGGTGGGCTGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPLGFQK*RWAVGG
Trigger: CCCTCCCACAGCCCACCTCCACTTTTGAAAGCCCAA...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACTCGGAGGGGCGCAGTaGAAAATCTCGGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPALGGAQ*KISAQG
Trigger: TCCTTGGGCCGAGATTTTCCACTGCGCCCCTCCGAG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAATTCTTCCATGTCGTaGCTAGGGGTTTGGAACCCG +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGNSSMS*LGVWNP
Trigger: CGGGTTCCAAACCCCTAGCCACGACATGGAAGAATT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTCTCGGAACTCAACGTTaGCATCGCTCTGCTCAACCG +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSLGTQR*HRSAQP
Trigger: CGGTTGAGCAGAGCGATGCCAACGTTGAGTTCCGAG...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATGTAGGAGTCAAGCCCTaGGAGAAGGGTGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANVGVKP*EKGVVR
Trigger: CCTCACCACACCCTTCTCCCAGGGCTTGACTCCTAC...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATACCGCCCCTTCAGGGATaGGGCTGTAGGAGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIPPLQG*GCRSQA
Trigger: GGCTTGACTCCTACAGCCCCATCCCTGAAGGGGCGG...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCTGACAGGTCACTGTTaGGGAAGAAGTCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGLTGHC*GRSHLL
Trigger: CAGCAGATGACTTCTTCCCCAACAGTGACCTGTCAG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGTCCATGGGCAGGTTCTaGAACGGCAAGCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVSMGRF*NGKLSS
Trigger: TGAGGAAAGCTTGCCGTTCCAGAACCTGCCCATGGA...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAACCCAGGGCTCGGGCATaGCTGTGGGAGAGCGACCAG +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQPRARA*LWESDQ
Trigger: CTGGTCGCTCTCCCACAGCCATGCCCGAGCCCTGGG...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTGGGGTCGTCGTAACTaGACTGGCTGCTTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGWGRRN*TGCFPR
Trigger: TCGGGGAAAGCAGCCAGTCCAGTTACGACGACCCCA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTTGGGGTCGTCGTAACTaGACTGGCTGCTTTCCCCGA +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTWGRRN*TGCFPR
Trigger: TCGGGGAAAGCAGCCAGTCCAGTTACGACGACCCCA...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATCCGTCTGCCGGGAGTTaGTGCTGCTGTGCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANPSAGS*CCCAKV
Trigger: CACTTTTGCACAGCAGCACCAACTCCCGGCAGACGG...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTGGTTCCAGAGGCTGCTaGCGCATCTGGGGAATGAGT +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTGSRGC*RIWGMS
Trigger: ACTCATTCCCCAGATGCGCCAGCAGCCTCTGGAACC...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAGGTGCCCCCTGTCAGTaGCTCCCTGGGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPGAPCQ*LPGLPS
Trigger: AGAAGGAAGCCCAGGGAGCCACTGACAGGGGGCACC...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAAGACGAACCGGCTCCTaGAAGGCTATTTTCAGACCC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSRRTGS*KAIFRP
Trigger: GGGTCTGAAAATAGCCTTCCAGGAGCCGGTTCGTCT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGGACCCTGGCATCCTCTaGCTGCACAGTTGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVDPGIL*LHSCRN
Trigger: ATTTCTGCAACTGTGCAGCCAGAGGATGCCAGGGTC...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTGGCAGTTGGCCACCTaGATCTCTTCCTCTATTGAC +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGWQLAT*ISSSID
Trigger: GTCAATAGAGGAAGAGATCCAGGTGGCCAACTGCCA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCATCCTCAGCAACGTaGCAGTTGGCCACCTGGATC +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSSSSAT*QLATWI
Trigger: GATCCAGGTGGCCAACTGCCACGTTGCTGAGGATGA...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAATTAGTCTCCCTTCCTaGGGTGAGGCCTTCCACCAC +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPISLPS*GEAFHH
Trigger: GTGGTGGAAGGCCTCACCCCAGGAAGGGAGACTAAT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAAATATCACCCTGAACTaGTACTCCCCAGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSNITLN*YSPGTG
Trigger: GCCAGTCCCTGGGGAGTACCAGTTCAGGGTGATATT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGGGTCTGGCTGCCTTaGTTGAATGTTCCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLWVWLP*LNVPEL
Trigger: CAACTCTGGAACATTCAACCAAGGCAGCCAGACCCA...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCCACAGACTGGCAGCATaGTGTCCTGACACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALHRLAA*CPDTAL
Trigger: AAGAGCAGTGTCAGGACACCATGCTGCCAGTCTGTG...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGGAGTTCTGCATTGGATaGGACAAACTCCCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVEFCIG*DKLPSR
Trigger: CCTGGACGGGAGTTTGTCCCATCCAATGCAGAACTC...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAGCATCGCTGAAACTGTaGTCAAAGGCAGCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLASLKL*SKAASL
Trigger: AAGCGAAGCTGCCTTTGACCACAGTTTCAGCGATGC...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCACTGGCGTTTCCGGATaGCCTTCGGATAATGTCAGT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFTGVSG*PSDNVS
Trigger: ACTGACATTATCCGAAGGCCATCCGGAAACGCCAGT...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGCAGGCCCTGAGTCCCTaGCATCCAGTGATGGATCAC +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALQALSP*HPVMDH
Trigger: GTGATCCATCACTGGATGCCAGGGACTCAGGGCCTG...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAATCCAGAATCTGCAGCTaGGGACCCTCACCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKSRICS*GPSPKP
Trigger: CGGCTTGGGTGAGGGTCCCCAGCTGCAGATTCTGGA...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGCCAGAATCTTTGTTaGCTGTGGGATCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSGQNLC*LWDHGQ
Trigger: CTGGCCATGATCCCACAGCCAACAAAGATTCTGGCC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAGTGGATGCAATCCATTaGGATCAGCCCACTGAGTTC +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLVDAIH*DQPTEF
Trigger: GAACTCAGTGGGCTGATCCCAATGGATTGCATCCAC...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTGAATGGTTCCCAGAGTaGGGCACGGACTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMAEWFPE*GTDFSQ
Trigger: TTGGCTGAAGTCCGTGCCTCACTCTGGGAACCATTC...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGAGGAAAGAGGGCTaGACTGCGTGTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAWRKEG*TACVWA
Trigger: TGCCCACACACACGCAGTTCAGCCCTCTTTCCTCCA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCAACAAGAGCCCTCTATaGACAGCTCTATGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALNKSPL*TALCPQ
Trigger: CTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTT...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAAACAAGAGCCCTCTATaGACAGCTCTATGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSNKSPL*TALCPQ
Trigger: CTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGAACAAGAGCCCTCTATaGACAGCTCTATGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVNKSPL*TALCPQ
Trigger: CTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTT...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTAAGGGAACAAACTACTaGGGCATTGTGATAAGACGA +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSKGTNY*GIVIRR
Trigger: TCGTCTTATCACAATGCCTCAGTAGTTTGTTCCCTT...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTACCTCTGAGGCGATaGGCCAGTTGCTCGGTGATG +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRLPLRR*ASCSVM
Trigger: CATCACCGAGCAACTGGCTCATCGCCTCAGAGGTAG...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATTAAACCCTGAGCACTaGACTGGGTCTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSLNPEH*TGSPVG
Trigger: TCCTACAGGAGACCCAGTTCAGTGCTCAGGGTTTAA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGACAACGAGAACCACCTaGTCACAAGTCACTGAAGGG +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVTTRTT*SQVTEG
Trigger: CCCTTCAGTGACTTGTGATCAGGTGGTTCTCGTTGT...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTGCCACGGCTTCTGTTaGGGATGTCCGGCTATTGGA +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANCHGFC*GCPAIG
Trigger: TCCAATAGCCGGACATCCTCAACAGAAGCCGTGGCA...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCAGACTCCCAGGGACCTaGCTTTGTAAATTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALRLPGT*LCKFEA
Trigger: AGCCTCGAATTTACAAAGTCAGGTCCCTGGGAGTCT...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTGTATTTGGCAAAGGTaGCTTCTCCATGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFCIWQR*LLHGQV
Trigger: AACCTGCCCATGGAGAAGTCACCTTTGCCAAATACA...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTGTATTTGGCAAAGGTaGCTTCTCCATGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGCIWQR*LLHGQV
Trigger: AACCTGCCCATGGAGAAGTCACCTTTGCCAAATACA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTATGTATCCTTCTGTTTaGCCATCACTGGGGATTGCC +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGMYPSV*PSLGIA
Trigger: GGCAATCCCCAGTGATGGTCAAACAGAAGGATACAT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCACTTTGTCCATCGCCATaGCCTTTCCATGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPLCPSP*PFHGSG
Trigger: CCCAGATCCATGGAAAGGTCATGGCGATGGACAAAG...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAACTTCGGGGAACTCTGTaGGGTGGCCCTCCACCCACG +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQLRGTL*GGPPPT
Trigger: CGTGGGTGGAGGGCCACCTCACAGAGTTCCCCGAAG...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCAGAACATGTGCTGCTaGCATGCACATCACTGTCTA +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGQNMCC*HAHHCL
Trigger: TAGACAGTGATGTGCATGTCAGCAGCACATGTTCTG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGATCTCTTCCTCTATTaGCTCTTCACCACCGACACT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGDLFLY*LFTTDT
Trigger: AGTGTCGGTGGTGAAGAGTCAATAGAGGAAGAGATC...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCGATCTCTTCCTCTATTaGCTCTTCACCACCGACACT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFDLFLY*LFTTDT
Trigger: AGTGTCGGTGGTGAAGAGTCAATAGAGGAAGAGATC...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGGCTCAATATCACCCTaGACTGGTACTCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGGSISP*TGTPQG
Trigger: TCCCTGGGGAGTACCAGTTCAGGGTGATATTGAGCC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAGGCAGCATGGTGTCCTaGCACTGCTCTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKGSMVS*HCSWVG
Trigger: ACCTACCCAAGAGCAGTGTCAGGACACCATGCTGCC...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAAGCTGCCCACCCTCTTaGAAGTTGCCATGTAAAATA +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTESCPPS*KLPCKI
Trigger: TATTTTACATGGCAACTTTCAAGAGGGTGGGCAGCT...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTGTCCCATGCAAGCACTaGGGTGCTTCTCAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSVPCKH*GASQSL
Trigger: AAGAGACTGAGAAGCACCTCAGTGCTTGCATGGGAC...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATTCAGAAGGTTCAGGTaGACCTTTATGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSFRRFR*TFMRGG
Trigger: CCCGCCTCTCATAAAGGTTCACCTGAACCTTCTGAA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGACCTGAGGCATCGCTaGAACTGTGGTCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYDLRHR*NCGQRQ
Trigger: CTGCCTTTGACCACAGTTTCAGCGATGCCTCAGGTC...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGGTCCCTGGCATCCAGTaGTGGATCACCAACCTCACT +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALVPGIQ*WITNLT
Trigger: AGTGAGGTTGGTGATCCATCACTGGATGCCAGGGAC...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATGTCCCTGGCATCCAGTaGTGGATCACCAACCTCACT +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANVPGIQ*WITNLT
Trigger: AGTGAGGTTGGTGATCCATCACTGGATGCCAGGGAC...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGTTTTAGCTGCCTCTaGTGCTTCCCTCAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGSFSCL*CFPQFF
Trigger: GAAGAACTGAGGGAAGCATCAGAGGCAGCTAAAACT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS-3UTR TCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCAGCCCGGCTTCCCTTTaGGAAGTTAAAGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFSPASL*EVKGDS
Trigger: AGAATCTCCTTTAACTTCTCAAAGGGAAGCCGGGCT...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTTTCAGGCCTCATGTCTaGAGCACTGGGACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTFRPHV*STGTQH
Trigger: GTGCTGAGTCCCAGTGCTGCAGACATGAGGCCTGAA...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGTACTCAAAAGAATCTaGTTCATCGGGGGTATCAAG +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSVLKRI*FIGGIK
Trigger: CTTGATACCCCCGATGAAGCAGATTCTTTTGAGTAC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTGTGTGTGTGGGCACGTaGGGAAGGACGGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSVCVGT*GRTGGD
Trigger: GTCTCCTCCCGTCCTTCCGCACGTGCCCACACACAC...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGTGTGTGTGGGCACGTaGGGAAGGACGGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLVCVGT*GRTGGD
Trigger: GTCTCCTCCCGTCCTTCCGCACGTGCCCACACACAC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAGTGTGTGTGGGCACGTaGGGAAGGACGGGAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRVCVGT*GRTGGD
Trigger: GTCTCCTCCCGTCCTTCCGCACGTGCCCACACACAC...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTGTGTTCTCCAGACCATaGATGTTCCTCCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCVFSRP*MFLRHR
Trigger: GCGGTGGCGGAGGAACATGCATGGTCTGGAGAACAC...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGAACCACCCCACCAGCTaGTGCACCGTGCATGGGTCT +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLNHPTS*CTVHGS
Trigger: AGACCCATGCACGGTGCAGCAGCTGGTGGGGTGGTT...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAGAATGGCGCCACAGCTaGTGGTTCACCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPEWRHS*WFTIIC
Trigger: ACAGATGATGGTGAACCAGCAGCTGTGGCGCCATTC...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAATCTTCTTTACCAAATaGACTCCAGGCTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTEIFFTK*TPGWEW
Trigger: CCATTCCCAGCCTGGAGTGCATTTGGTAAAGAAGAT...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCAGAAGGTGTCTTGCTaGTTGTTGGGTGCAAATTCC +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGQKVSC*LLGANS
Trigger: GGAATTTGCACCCAACAAGCAGCAAGACACCTTCTG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGTGTACAGTTGCATCATaGTGGGGTCGTCGTAACTGG +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVCTVAS*WGRRNW
Trigger: CCAGTTACGACGACCCCAGCATGATGCAACTGTACA...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTGTTTCATTGTACAGTTaGATCATGCTGGGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLVSLYS*IMLGSS
Trigger: CGACGACCCCAGCATGATGCAACTGTACAATGAAAC...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCGAGTTGGTGCTGCTGTaGAAAAGTGTGAGTTGTCGG +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALELVLL*KSVSCR
Trigger: CCGACAACTCACACTTTTGCACAGCAGCACCAACTC...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGTTGCCGCACCCCCACTaGAGTCATCCCAGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWLPHPH*SHPSPN
Trigger: ATTTGGACTGGGATGACTGCAGTGGGGGTGCGGCAA...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTTTGCCGCACCCCCACTaGAGTCATCCCAGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTLPHPH*SHPSPN
Trigger: ATTTGGACTGGGATGACTGCAGTGGGGGTGCGGCAA...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAACCATCACTGGGGATTaGCGCACCCCCACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPTITGD*RTPTAV
Trigger: GACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGT...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAACCATCACTGGGGATTaGCGCACCCCCACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHITITGD*RTPTAV
Trigger: GACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGT...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGCACTGTCCTTGGTATaGTCATCAGAGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWALSLV*SSEAGS
Trigger: GCTCCCTGCCTCTGATGAGCATACCAAGGACAGTGC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTTTCCTGATGTTCAGATaGAACCAGAGAAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSFLMFR*NQRRQF
Trigger: GAACTGTCTTCTCTGGTTGCATCTGAACATCAGGAA...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTGGCTGCAGGTTATCTaGGGACATCCCTGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSWLQVI*GHPCLH
Trigger: GTGCAAACAGGGATGTCCGCAGATAACCTGCAGCCA...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTCTGTCATGTTCGCAGTaGGTCAGGATATCAGGATTC +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLLSCSQ*VRISGF
Trigger: GAATCCTGATATCCTGACGCACTGCGAACATGACAG...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTGGTTCCAAAATTGGTaGCATATCTGGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAWFQNW*HIWAGS
Trigger: GGAGCCAGCCCAGATATGGCACCAATTTTGGAACCA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCATACGGTGCCAGCGACTaGTTCAGAGAATCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPYGASD*FRESSS
Trigger: GGAGGAAGATTCTCTGAAGCAGTCGCTGGCACCGTA...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGGGAGGTGTGTACGGTaGCAGCGACTGCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSGRCVR*QRLLQR
Trigger: TCTCTGAAGCAGTCGCTGGCACCGTACACACCTCCC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGAAAGCACTATCTCTaGTGCTCTGCATCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGRKHYL*CSASQR
Trigger: TCTCTGGGATGCAGAGCAGCAGAGATAGTGCTTTCT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTCATGTCTGCAGCACTaGGACTCAGCACGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGSCLQH*DSARPL
Trigger: AAGAGGGCGTGCTGAGTCCCAGTGCTGCAGACATGA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCACCATGAGACTAGGGTaGAACCGCTCTCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGTMRLG*NRSHPF
Trigger: GAAGGGGTGAGAGCGGTTCCACCCTAGTCTCATGGT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTACCATGAGACTAGGGTaGAACCGCTCTCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTTMRLG*NRSHPF
Trigger: GAAGGGGTGAGAGCGGTTCCACCCTAGTCTCATGGT...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCGGACTCCAAATATCCTaGACAGCTCTCCCCAATGAA +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFGLQIS*TALPNE
Trigger: TTCATTGGGGAGAGCTGTCCAGGATATTTGGAGTCC...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAGGCTGTGGGAGGGGGTaGGCTGTAGGGTTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKGCGRG*AVGFFC
Trigger: ACAGAAAAACCCTACAGCCCACCCCCTCCCACAGCC...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAGGGAGAGGTGTAATTTaGGCTTTCAAAAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTEGRGVI*AFKSGG
Trigger: ACCTCCACTTTTGAAAGCCCAAATTACACCTCTCCC...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTGGCCCAATAACCACATaGACCTTCTCCAAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAGPITT*TFSKRL
Trigger: CAAACGCTTGGAGAAGGTCCATGTGGTTATTGGGCC...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAGCTCGGGCATGGCTGTaGGAGAGCGACCAGAATGCC +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRARAWL*ESDQNA
Trigger: GGCATTCTGGTCGCTCTCCCACAGCCATGCCCGAGC...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAACTCCAGGCTGGGAATaGCGCCACAGCTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTETPGWE*RHSCWF
Trigger: GAACCAGCAGCTGTGGCGCCATTCCCAGCCTGGAGT...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACTGTTTGACCATCACTaGGGATTGCCGCACCCCCAC +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPALFDHH*GLPHPH
Trigger: GTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCACTGTTTGACCATCACTaGGGATTGCCGCACCCCCAC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSLFDHH*GLPHPH
Trigger: GTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAG...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAGGTTCCAGAGGCTGCTaGCGCATCTGGGGAATGAGT +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAGSRGC*RIWGMS
Trigger: ACTCATTCCCCAGATGCGCCAGCAGCCTCTGGAACC...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAGGGAACTCTGTGAGGTaGCCCTCCACCCACGTTCTC +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPGNSVR*PSTHVL
Trigger: GAGAACGTGGGTGGAGGGCCACCTCACAGAGTTCCC...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACTTGATACCCAGAACTaGGTTGCTGGCCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPALDTQN*VAGPRR
Trigger: CCTCCTGGGGCCAGCAACCCAGTTCTGGGTATCAAG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTCTTGATACCCAGAACTaGGTTGCTGGCCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCLDTQN*VAGPRR
Trigger: CCTCCTGGGGCCAGCAACCCAGTTCTGGGTATCAAG...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTGGCAGTTGGCCACCTaGATCTCTTCCTCTATTGAC +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAWQLAT*ISSSID
Trigger: GTCAATAGAGGAAGAGATCCAGGTGGCCAACTGCCA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTCATCCTCAGCAACGTaGCAGTTGGCCACCTGGATC +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGSSSAT*QLATWI
Trigger: GATCCAGGTGGCCAACTGCCACGTTGCTGAGGATGA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAATCCCATTCAGAGCCTaGCTTCATTATCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTEIPFRA*LHYQLG
Trigger: ACCCAACTGATAATGAAGCCAGGCTCTGAATGGGAT...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCGGGAGTCCTCACTTaGGGTAGAGCCATCCCATTC +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALSGVLT*GRAIPF
Trigger: GAATGGGATGGCTCTACCCCAAGTGAGGACTCCCGA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGTCCAGGCTCATAAATaGGTTCTTCATCTATCTCTG +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSVQAHK*VLHLSL
Trigger: CAGAGATAGATGAAGAACCCATTTATGAGCCTGGAC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAACTGGCGTTTCCGGATaGCCTTCGGATAATGTCAGT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSTGVSG*PSDNVS
Trigger: ACTGACATTATCCGAAGGCCATCCGGAAACGCCAGT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTATGGAGACAAAATGTTaGAGCCTGCTCCTACCGGCA +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAMETKC*SLLLPA
Trigger: TGCCGGTAGGAGCAGGCTCCAACATTTTGTCTCCAT...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCACTTGCTGGCACCATTTaGTGGTCCTATGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPLAGTI*WSYVST
Trigger: GGTGGAGACATAGGACCACCAAATGGTGCCAGCAAG...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAACAGGCCCTGAGTCCCTaGCATCCAGTGATGGATCAC +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKQALSP*HPVMDH
Trigger: GTGATCCATCACTGGATGCCAGGGACTCAGGGCCTG...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACAGGCCCTGAGTCCCTaGCATCCAGTGATGGATCAC +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRQALSP*HPVMDH
Trigger: GTGATCCATCACTGGATGCCAGGGACTCAGGGCCTG...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTCAGGCCCTGAGTCCCTaGCATCCAGTGATGGATCAC +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVQALSP*HPVMDH
Trigger: GTGATCCATCACTGGATGCCAGGGACTCAGGGCCTG...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGTCCAGAATCTGCAGCTaGGGACCCTCACCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLSRICS*GPSPKP
Trigger: CGGCTTGGGTGAGGGTCCCCAGCTGCAGATTCTGGA...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGTGGATGCAATCCATTaGGATCAGCCCACTGAGTTC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSVDAIH*DQPTEF
Trigger: GAACTCAGTGGGCTGATCCCAATGGATTGCATCCAC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTCAAGTTCATCCACATTaGTGTCAATTTCATCTGGAC +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSQVHPH*CQFHLD
Trigger: GTCCAGATGAAATTGACATCAATGTGGATGAACTTG...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGCTCTTGTTCTCCAATaGCCACTGTCCTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYALVLQ*PLSSKA
Trigger: GGCTTTGGAGGACAGTGGTCATTGGAGAACAAGAGC...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGTCCTGTAGGGCTCGATaGCCTTCATGTCAATGCGCT +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWSCRAR*PSCQCA
Trigger: AGCGCATTGACATGAAGGTCATCGAGCCCTACAGGA...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATAGGCGGCAAACACAATaGTGGCATTTAGACCGTCCC +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYRRQTQ*WHLDRP
Trigger: GGGACGGTCTAAATGCCATCATTGTGTTTGCCGCCT...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGAGGCGGCAAACACAATaGTGGCATTTAGACCGTCCC +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWRRQTQ*WHLDRP
Trigger: GGGACGGTCTAAATGCCATCATTGTGTTTGCCGCCT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGGAAAAGATTTTCCATaGCATAGTGGTAATCCGCCC +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGGKDFP*HSGNPP
Trigger: GGGCGGATTACCACTATGTCATGGAAAATCTTTTCC...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAGAATGGTTCCCAGAGTaGGGCACGGACTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAEWFPE*GTDFSQ
Trigger: TTGGCTGAAGTCCGTGCCTCACTCTGGGAACCATTC...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAGAATGGTTCCCAGAGTaGGGCACGGACTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKEWFPE*GTDFSQ
Trigger: TTGGCTGAAGTCCGTGCCTCACTCTGGGAACCATTC...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGACAGCTCTCCCCAATaGATTTTCCACCATGAGACT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSDSSPQ*IFHHET
Trigger: AGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGTGGAGGAAAGAGGGCTaGACTGCGTGTGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLWRKEG*TACVWA
Trigger: TGCCCACACACACGCAGTTCAGCCCTCTTTCCTCCA...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAGATTTTCTTCCACACTaGGCTACTGCCCTCAAACAA +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLDFLPH*ATALKQ
Trigger: TTGTTTGAGGGCAGTAGCTCAGTGTGGAAGAAAATC...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATACTACCTCTGAGGCGATaGGCCAGTTGCTCGGTGATG +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHILPLRR*ASCSVM
Trigger: CATCACCGAGCAACTGGCTCATCGCCTCAGAGGTAG...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACTACCTCTGAGGCGATaGGCCAGTTGCTCGGTGATG +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTELPLRR*ASCSVM
Trigger: CATCACCGAGCAACTGGCTCATCGCCTCAGAGGTAG...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTCAATACTTAAACCCTaGGCACTGAACTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSASILKP*ALNWVS
Trigger: GGAGACCCAGTTCAGTGCTCAGGGTTTAAGTATTGA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGCAGCTCCATGTTTTCTaGGTACACAGCAATCTGTCG +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVQLHVF*VHSNLS
Trigger: CGACAGATTGCTGTGTACTCAGAAAACATGGAGCTG...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTTGCCACGGCTTCTGTTaGGGATGTCCGGCTATTGGA +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCCHGFC*GCPAIG
Trigger: TCCAATAGCCGGACATCCTCAACAGAAGCCGTGGCA...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAATGCCACGGCTTCTGTTaGGGATGTCCGGCTATTGGA +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKCHGFC*GCPAIG
Trigger: TCCAATAGCCGGACATCCTCAACAGAAGCCGTGGCA...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAAGAGCTCTCCTTGGATaGGCGGCTGCTCCTAATGGT +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPARALLG*AAAPNG
Trigger: ACCATTAGGAGCAGCCGCTCATCCAAGGAGAGCTCT...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATACGGGGCTGTCGTCACTaGGGAAAACAGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIRGCRH*GKQSSP
Trigger: AGGAGAGCTCTGTTTTCCTCAGTGACGACAGCCCCG...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAGGGGAGCTGTCCTTCTaGCAGGTCACTGTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEGELSF*QVTVGE
Trigger: TTCCCCAACAGTGACCTGTCAGAAGGACAGCTCCCC...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCTGTATTTGGCAAAGGTaGCTTCTCCATGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALCIWQR*LLHGQV
Trigger: AACCTGCCCATGGAGAAGTCACCTTTGCCAAATACA...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCCCAGGTGCAAAGATGTaGTCCCTGGAGTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALPGAKM*SLESLF
Trigger: AAACAATGACTCCAGGGATCACATCTTTGCACCTGG...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCACCAGGTGCAAAGATGTaGTCCCTGGAGTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSPGAKM*SLESLF
Trigger: AAACAATGACTCCAGGGATCACATCTTTGCACCTGG...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATGACTGTTGCAGTGACTaGGGAGGAATGTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANDCCSD*GGMSVS
Trigger: GGAGACTGACATTCCTCCTCAGTCACTGCAACAGTC...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCATCGTTGCAGTGGACTaGGTATCCTCCAAAATCACT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFIVAVD*VSSKIT
Trigger: AGTGATTTTGGAGGATACTCAGTCCACTGCAACGAT...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTATCGTTGCAGTGGACTaGGTATCCTCCAAAATCACT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGIVAVD*VSSKIT
Trigger: AGTGATTTTGGAGGATACTCAGTCCACTGCAACGAT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATCTTTGTCCATCGCCATaGCCTTTCCATGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANLCPSP*PFHGSG
Trigger: CCCAGATCCATGGAAAGGTCATGGCGATGGACAAAG...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTCAGTGCTATCAGCTaGGAAGCCCAGCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWLSAIS*EAQHFQ
Trigger: CTGGAAATGCTGGGCTTCTCAGCTGATAGCACTGAG...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAGGCTCAATATCACCCTaGACTGGTACTCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEGSISP*TGTPQG
Trigger: TCCCTGGGGAGTACCAGTTCAGGGTGATATTGAGCC...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGGCTCAATATCACCCTaGACTGGTACTCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVGSISP*TGTPQG
Trigger: TCCCTGGGGAGTACCAGTTCAGGGTGATATTGAGCC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTACCTTCCAGAAAGGGTaGCTGATGGTTGTCACTAAA +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGTFQKG*LMVVTK
Trigger: TTTAGTGACAACCATCAGTCACCCTTTCTGGAAGGT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTATTTTACAAGCTGGCTaGACTTGTCAGCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGILQAG*TCQHLG
Trigger: ACCCAGATGCTGACAAGTTCAGCCAGCTTGTAAAAT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAGGCAGCATGGTGTCCTaGCACTGCTCTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIGSMVS*HCSWVG
Trigger: ACCTACCCAAGAGCAGTGTCAGGACACCATGCTGCC...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAAGCTGCCCACCCTCTTaGAAGTTGCCATGTAAAATA +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLSCPPS*KLPCKI
Trigger: TATTTTACATGGCAACTTTCAAGAGGGTGGGCAGCT...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAGGGCTGTCGGAAGCCTaGGAATTGCTGTCATGTTCG +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAGLSEA*ELLSCS
Trigger: CGAACATGACAGCAATTCTCAGGCTTCCGACAGCCC...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGGTCCCATGCAAGCACTaGGGTGCTTCTCAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALVPCKH*GASQSL
Trigger: AAGAGACTGAGAAGCACCTCAGTGCTTGCATGGGAC...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTTCAGAAGGTTCAGGTaGACCTTTATGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSFRRFR*TFMRGG
Trigger: CCCGCCTCTCATAAAGGTTCACCTGAACCTTCTGAA...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGCTCTTGCACCAGGCTaGCTTTCAGGAGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGALAPG*LSGEKL
Trigger: CAGCTTTTCTCCTGAAAGTCAGCCTGGTGCAAGAGC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAGGGAAGCTTGCTAACTaGGTTCCCTGCAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEGKLAN*VPCSPV
Trigger: AACAGGGCTGCAGGGAACTCAGTTAGCAAGCTTCCC...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGGGAAGCTTGCTAACTaGGTTCCCTGCAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSGKLAN*VPCSPV
Trigger: AACAGGGCTGCAGGGAACTCAGTTAGCAAGCTTCCC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTAGGGCTTTCAAAAGATaGTCTCGTATCGCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSRAFKR*SRIAFR
Trigger: TCTAAAAGCGATACGAGATCATCTTTTGAAAGCCCT...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGTCCCTGGCATCCAGTaGTGGATCACCAACCTCACT +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSVPGIQ*WITNLT
Trigger: AGTGAGGTTGGTGATCCATCACTGGATGCCAGGGAC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGTCTTCTGTGATTGGCTaGCTGGACCAGAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWSSVIG*LDQRLP
Trigger: AGGAAGCCTCTGGTCCAGTCAGCCAATCACAGAAGA...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTTCATGTCAATGCGCTaGTCTTGTTCTCCAATGACC +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGFMSMR*SCSPMT
Trigger: GGTCATTGGAGAACAAGAGCAGCGCATTGACATGAA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAGGTAATCCGCCCGACTaGTGTCTGGCAGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAGNPPD*CLAENR
Trigger: CCTGTTTTCTGCCAGACAGCAGTCGGGCGGATTACC...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGGTAATCCGCCCGACTaGTGTCTGGCAGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSGNPPD*CLAENR
Trigger: CCTGTTTTCTGCCAGACAGCAGTCGGGCGGATTACC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTAGCTTTGAGAAACAATaGTTTTGCCCCAATGACCCC +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLSFEKQ*FCPNDP
Trigger: GGGGTCATTGGGGCAAAAGCATTGTTTCTCAAAGCT...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATCGCCAGCACACTGCTaGCAACAAGTGTTATCGATA +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSSPAHC*QQVLSI
Trigger: TATCGATAACACTTGTTGGCAGCAGTGTGCTGGCGA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACAGCAAATCTGACTaGACAGCTCCATGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLHSKSD*TAPCFL
Trigger: CAGAAAACATGGAGCTGTGCAGTCAGATTTGCTGTG...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTGTGTTCTCCAGACCATaGATGTTCCTCCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVVFSRP*MFLRHR
Trigger: GCGGTGGCGGAGGAACATGCATGGTCTGGAGAACAC...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAGTGTTCTCCAGACCATaGATGTTCCTCCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEVFSRP*MFLRHR
Trigger: GCGGTGGCGGAGGAACATGCATGGTCTGGAGAACAC...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCATTGAAGAGGTCGAAGTaGTCACCGTGTTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPLKRSK*SPCSPD
Trigger: GTCTGGAGAACACGGTGAGCACTTCGACCTCTTCAA...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTCCACAAGGCTATCTTTaGCAGCCCCTGACAAAAGTG +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSPQGYL*QPLTKV
Trigger: CACTTTTGTCAGGGGCTGGCAAAGATAGCCTTGTGG...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTGGAGAGCGACCAGAATaGCACAAAGAAGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAGERPE*HKEAKS
Trigger: AGACTTTGCTTCTTTGTGGCATTCTGGTCGCTCTCC...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGAGAGCGACCAGAATaGCACAAAGAAGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSGERPE*HKEAKS
Trigger: AGACTTTGCTTCTTTGTGGCATTCTGGTCGCTCTCC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGAATGGCGCCACAGCTaGTGGTTCACCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYEWRHS*WFTIIC
Trigger: ACAGATGATGGTGAACCAGCAGCTGTGGCGCCATTC...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTCAGAAGGTGTCTTGCTaGTTGTTGGGTGCAAATTCC +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAQKVSC*LLGANS
Trigger: GGAATTTGCACCCAACAAGCAGCAAGACACCTTCTG...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGGCAAACCCACTTTTTaGCATGGCCCACTCATTCGG +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGGKPTF*HGPLIR
Trigger: CCGAATGAGTGGGCCATGGCAAAAAGTGGGTTTGCC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTAATGTCAGTCTCCTCTaGCGTGGAGTTACCATCTTT +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLNVSLL*RGVTIF
Trigger: AAAGATGGTAACTCCACGGCAGAGGAGACTGACATT...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCACGTAACTGGACTGGCTaGTTTCCCCGACGTCATCCT +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSRNWTG*FPRRHP
Trigger: AGGATGACGTCGGGGAAAGCAGCCAGTCCAGTTACG...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGTTTCATTGTACAGTTaGATCATGCTGGGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSVSLYS*IMLGSS
Trigger: CGACGACCCCAGCATGATGCAACTGTACAATGAAAC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTTGCCGCACCCCCACTaGAGTCATCCCAGTCCAAAT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVLPHPH*SHPSPN
Trigger: ATTTGGACTGGGATGACTGCAGTGGGGGTGCGGCAA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTCCAATCTACCTGATTTaGTTCCTGATACTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLPIYLI*FLILQA
Trigger: GGCTTGGAGTATCAGGAAGCAAATCAGGTAGATTGG...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGCACTGTCCTTGGTATaGTCATCAGAGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVALSLV*SSEAGS
Trigger: GCTCCCTGCCTCTGATGAGCATACCAAGGACAGTGC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCATCCTCTTCATCAAGGTaGCCCCTGTCAGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPSSSSR*PLSVAP
Trigger: GGGAGCCACTGACAGGGGGCACCTTGATGAAGAGGA...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGGCGGACATCCCTGTTTaGACATCACGGGAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALADIPV*TSRESR
Trigger: TCTAGACTCCCGTGATGTGCAAACAGGGATGTCCGC...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGCGGACATCCCTGTTTaGACATCACGGGAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGADIPV*TSRESR
Trigger: TCTAGACTCCCGTGATGTGCAAACAGGGATGTCCGC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTGGCTGCAGGTTATCTaGGGACATCCCTGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALWLQVI*GHPCLH
Trigger: GTGCAAACAGGGATGTCCGCAGATAACCTGCAGCCA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTGGGTATCTTTTGGCTaGAGGTTATCTGCGGACATC +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAWVSFG*RLSADI
Trigger: GATGTCCGCAGATAACCTGCAGCCAAAAGATACCCA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCTCCAGGGATCAGGGCTaGTTTGTTGATTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALSRDQG*FVDCHR
Trigger: TCTGTGACAATCAACAAAGCAGCCCTGATCCCTGGA...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGGAGATATTTGCCATaGAACATCTCCTGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSGRYLP*NISCCP
Trigger: GGGACAACAGGAGATGTTGCATGGCAAATATCTCCC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATGGAGGCAGCACAGTTaGGTTTTCAGAATCGAGTTC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSWRQHS*VFRIEF
Trigger: GAACTCGATTCTGAAAACGCAACTGTGCTGCCTCCA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGGATGAGCAGATATCTTaGTTCCCTAGGTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVDEQIS*FPRSPS
Trigger: TGATGGGGACCTAGGGAAGCAAGATATCTGCTCATC...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTACGGTGCCAGCGACTaGTTCAGAGAATCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALYGASD*FRESSS
Trigger: GGAGGAAGATTCTCTGAAGCAGTCGCTGGCACCGTA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCACTATCTCTGCTGCTCTaGATCCCAGAGATTCATCCT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSLSLLL*IPEIHP
Trigger: AGGATGAATCTCTGGGATGCAGAGCAGCAGAGATAG...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGGGTCTTCACGAATATaGAGCACAGCCAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGGSSRI*STASWD
Trigger: ATCCCAGCTGGCTGTGCTGCATATTCGTGAAGACCC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCATTTCTTCCAGAATCTaGAGCTGGGGACCCTCACCC +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGISSRI*SWGPSP
Trigger: GGGTGAGGGTCCCCAGCTGCAGATTCTGGAAGAAAT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATATTTCTTCCAGAATCTaGAGCTGGGGACCCTCACCC +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANISSRI*SWGPSP
Trigger: GGGTGAGGGTCCCCAGCTGCAGATTCTGGAAGAAAT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCATCCGGGCCAGCCCTaGCTCGGCTCTTACTCTTCT +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLHPGQP*LGSYSS
Trigger: AGAAGAGTAAGAGCCGAGGCAGGGCTGGCCCGGATG...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAAGCCTGCAACGTAACTaGATCCGGGCCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQSLQRN*IRASPA
Trigger: GGCAGGGCTGGCCCGGATGCAGTTACGTTGCAGGCT...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATACGCCCGACTGCTGTCTaGCAGAAAACAGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIRPTAV*QKTGGK
Trigger: TTTGCCGCCTGTTTTCTGCCAGACAGCAGTCGGGCG...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCACGCCCGACTGCTGTCTaGCAGAAAACAGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPRPTAV*QKTGGK
Trigger: TTTGCCGCCTGTTTTCTGCCAGACAGCAGTCGGGCG...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAACCATGAGACTAGGGTaGAACCGCTCTCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSETMRLG*NRSHPF
Trigger: GAAGGGGTGAGAGCGGTTCCACCCTAGTCTCATGGT...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAGGCTGTGGGAGGGGGTaGGCTGTAGGGTTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIGCGRG*AVGFFC
Trigger: ACAGAAAAACCCTACAGCCCACCCCCTCCCACAGCC...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTTTGGGCTTTCAAAAGTaGAGGTGGGCTGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCLGFQK*RWAVGG
Trigger: CCCTCCCACAGCCCACCTCCACTTTTGAAAGCCCAA...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATTGGGCTTTCAAAAGTaGAGGTGGGCTGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSLGFQK*RWAVGG
Trigger: CCCTCCCACAGCCCACCTCCACTTTTGAAAGCCCAA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCGTCAACACTGTGTTCTaGGAGAGGTGTAATTTGGGC +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALVNTVF*ERCNLG
Trigger: GCCCAAATTACACCTCTCCCAGAACACAGTGTTGAC...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTCTCGGAACTCAACGTTaGCATCGCTCTGCTCAACCG +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCLGTQR*HRSAQP
Trigger: CGGTTGAGCAGAGCGATGCCAACGTTGAGTTCCGAG...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTATTGGAGACCATCTCTaGACACCTCCTGTTGATGAC +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAIGDHL*TPPVDD
Trigger: GTCATCAACAGGAGGTGTCCAGAGATGGTCTCCAAT...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAGGATGTCCGGCTATTaGAGACCATCTCTGGACACC +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANRMSGY*RPSLDT
Trigger: GGTGTCCAGAGATGGTCTCCAATAGCCGGACATCCT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGCACAGAGCTGGGTTGTaGCTCTATGTCAGAACCATA +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVHRAGL*LYVRTI
Trigger: TATGGTTCTGACATAGAGCCACAACCCAGCTCTGTG...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTGTAGGAGTCAAGCCCTaGGAGAAGGGTGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVVGVKP*EKGVVR
Trigger: CCTCACCACACCCTTCTCCCAGGGCTTGACTCCTAC...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAAGGCTCTCCTATCAATaGAGCTTGGCTTATGCTCTT +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLRLSYQ*SLAYAL
Trigger: AAGAGCATAAGCCAAGCTCCATTGATAGGAGAGCCT...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCCATGGGCAGGTTCTaGAACGGCAAGCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALSMGRF*NGKLSS
Trigger: TGAGGAAAGCTTGCCGTTCCAGAACCTGCCCATGGA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAGCTCGGGCATGGCTGTaGGAGAGCGACCAGAATGCC +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQARAWL*ESDQNA
Trigger: GGCATTCTGGTCGCTCTCCCACAGCCATGCCCGAGC...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATGGCGCCACAGCTGCTaGTTCACCATCATCTGTAGG +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSWRHSC*FTIICR
Trigger: CCTACAGATGATGGTGAACCAGCAGCTGTGGCGCCA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTACTCCAGGCTGGGAATaGCGCCACAGCTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLTPGWE*RHSCWF
Trigger: GAACCAGCAGCTGTGGCGCCATTCCCAGCCTGGAGT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGATCCAGATCAGAACTaGGATTTCCAGGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGDPDQN*DFQVQR
Trigger: TCTTTGCACCTGGAAATCCCAGTTCTGATCTGGATC...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCACAGTCTCCTCTGCCGTaGAGTTACCATCTTTTGACT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSQSPLP*SYHLLT
Trigger: AGTCAAAAGATGGTAACTCCACGGCAGAGGAGACTG...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCGACGTCATCCTCCATaGAGATATTCTTACCATCTG +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGRRHPP*RYSYHL
Trigger: CAGATGGTAAGAATATCTCCATGGAGGATGACGTCG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAACAGTTGCATCATGCTaGGGTCGTCGTAACTGGACT +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPTVASC*GRRNWT
Trigger: AGTCCAGTTACGACGACCCCAGCATGATGCAACTGT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCGTCTGCCGGGAGTTaGTGCTGCTGTGCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEPSAGS*CCCAKV
Trigger: CACTTTTGCACAGCAGCACCAACTCCCGGCAGACGG...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCACCGTCTGCCGGGAGTTaGTGCTGCTGTGCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPPSAGS*CCCAKV
Trigger: CACTTTTGCACAGCAGCACCAACTCCCGGCAGACGG...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGGCTGCTGGCGCATCTaGGGAATGAGTGTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGGCWRI*GMSVFN
Trigger: GTTAAAGACACTCATTCCCCAGATGCGCCAGCAGCC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGGCTGCTGGCGCATCTaGGGAATGAGTGTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYGCWRI*GMSVFN
Trigger: GTTAAAGACACTCATTCCCCAGATGCGCCAGCAGCC...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAGTGCCTCTGATTCACTaGTTCCAGAGGCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPVPLIH*FQRLLA
Trigger: CGCCAGCAGCCTCTGGAACCAGTGAATCAGAGGCAC...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGCCATGACCTTTCCATaGATCTGGGTGTGGAAAATA +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGAMTFP*IWVWKI
Trigger: TATTTTCCACACCCAGATCCATGGAAAGGTCATGGC...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTTCATGGGTATCTTTTaGCTGCAGGTTATCTGCGGA +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLFMGIF*LQVICG
Trigger: TCCGCAGATAACCTGCAGCCAAAAGATACCCATGAA...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTGATACCCAGAACTaGGTTGCTGGCCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVLDTQN*VAGPRR
Trigger: CCTCCTGGGGCCAGCAACCCAGTTCTGGGTATCAAG...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTATGAATCCCAAGCTCTaGATTCATCCTCAGCAACGT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGMNPKL*IHPQQR
Trigger: ACGTTGCTGAGGATGAATCCAGAGCTTGGGATTCAT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAATATCACCCTGAACTaGTACTCCCCAGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANNITLN*YSPGTG
Trigger: GCCAGTCCCTGGGGAGTACCAGTTCAGGGTGATATT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGCACAGACTGGCAGCATaGTGTCCTGACACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALHRLAA*CPDTAL
Trigger: AAGAGCAGTGTCAGGACACCATGCTGCCAGTCTGTG...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTGAGTTCTGCATTGGATaGGACAAACTCCCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMAEFCIG*DKLPSR
Trigger: CCTGGACGGGAGTTTGTCCCATCCAATGCAGAACTC...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGAGTTCTGCATTGGATaGGACAAACTCCCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWEFCIG*DKLPSR
Trigger: CCTGGACGGGAGTTTGTCCCATCCAATGCAGAACTC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCTGCTTGATAGCCAATTaGAGGCAGCACAGTTGCGTT +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALCLIAN*RQHSCV
Trigger: AACGCAACTGTGCTGCCTCCAATTGGCTATCAAGCA...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTGCTTGATAGCCAATTaGAGGCAGCACAGTTGCGTT +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSACLIAN*RQHSCV
Trigger: AACGCAACTGTGCTGCCTCCAATTGGCTATCAAGCA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTGTGCCATATCTGGGCTaGCTCCTTTTTCTGATACTT +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLVPYLG*LLFLIL
Trigger: AAGTATCAGAAAAAGGAGCCAGCCCAGATATGGCAC...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTAACTGGTTCCAAAATTaGTGCCATATCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSANWFQN*CHIWAG
Trigger: GCCAGCCCAGATATGGCACCAATTTTGGAACCAGTT...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGTCACCTTCTGGAGTTaGCTCTTGGTGAGTTACAAA +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGVTFWS*LLVSYK
Trigger: TTTGTAACTCACCAAGAGCCAACTCCAGAAGGTGAC...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTGCATCGCTGAAACTGTaGTCAAAGGCAGCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSASLKL*SKAASL
Trigger: AAGCGAAGCTGCCTTTGACCACAGTTTCAGCGATGC...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAGCTGGCACCATTTGGTaGTCCTATGTCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAAGTIW*SYVSTC
Trigger: GCAGGTGGAGACATAGGACCACCAAATGGTGCCAGC...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAGCTGGCACCATTTGGTaGTCCTATGTCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEAGTIW*SYVSTC
Trigger: GCAGGTGGAGACATAGGACCACCAAATGGTGCCAGC...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAAAGAACATCCAACTCTaGTCTTGTGCAGGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLKNIQL*SCAGLS
Trigger: TGAAAGCCCTGCACAAGACCAGAGTTGGATGTTCTT...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCCAGAATCTGCAGCTaGGGACCCTCACCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSSRICS*GPSPKP
Trigger: CGGCTTGGGTGAGGGTCCCCAGCTGCAGATTCTGGA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTTACTCTTCTGTGATTaGCTGACTGGACCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSALLFCD*LTGPEA
Trigger: AGCCTCTGGTCCAGTCAGCCAATCACAGAAGAGTAA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGTTACTCTTCTGTGATTaGCTGACTGGACCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVLLFCD*LTGPEA
Trigger: AGCCTCTGGTCCAGTCAGCCAATCACAGAAGAGTAA...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTGGCTGTGGGATCATaGCCAGTGTACTCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFLAVGS*PVYSKE
Trigger: TTCTTTTGAGTACACTGGCCATGATCCCACAGCCAA...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376718.8
ENST00000443509.6
CDS-3UTR CCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTAATCTTTGTTGGCTGTaGGATCATGGCCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLNLCWL*DHGQCT
Trigger: AGTACACTGGCCATGATCCCACAGCCAACAAAGATT...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376718.8
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCTGGCATCCTCCTTCTTaGGGTTGCACCATTCAAGTA +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALWHPPS*GCTIQV
Trigger: TACTTGAATGGTGCAACCCCAAGAAGGAGGATGCCA...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATGGCATCCTCCTTCTTaGGGTTGCACCATTCAAGTA +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSWHPPS*GCTIQV
Trigger: TACTTGAATGGTGCAACCCCAAGAAGGAGGATGCCA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTGGCATCCTCCTTCTTaGGGTTGCACCATTCAAGTA +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAWHPPS*GCTIQV
Trigger: TACTTGAATGGTGCAACCCCAAGAAGGAGGATGCCA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCCCTCTTCTTCCAGCATaGCCAACTAAGGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFPLLPA*PTKAFL
Trigger: AAGAAAAGCCTTAGTTGGCCATGCTGGAAGAAGAGG...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCTTTCTAACGGAGGGTaGGAAGGATGCACGACTACA +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGLSNGG*EGCTTT
Trigger: TGTAGTCGTGCATCCTTCTCACCCTCCGTTAGAAAG...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376717.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTTCTGGAATAGACTCTaGCTCTTGGCCAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGFWNRL*LLARIF
Trigger: AAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGCTCTTGTTCTCCAATaGCCACTGTCCTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSALVLQ*PLSSKA
Trigger: GGCTTTGGAGGACAGTGGTCATTGGAGAACAAGAGC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTATCCTCCGTGAGAAATaGCTCTCCTGTAGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVILREK*LSCRAR
Trigger: TCGAGCCCTACAGGAGAGTCATTTCTCACGGAGGAT...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGAAAAGATTTTCCATaGCATAGTGGTAATCCGCCC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSGKDFP*HSGNPP
Trigger: GGGCGGATTACCACTATGTCATGGAAAATCTTTTCC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGACAGAGGTGAAGCAATaGGGTCAGAGAAACTCAATC +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVTEVKQ*GQRNSI
Trigger: GATTGAGTTTCTCTGACCTCATTGCTTCACCTCTGT...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTTTCATTACTTCCTGTaGCAGGGTGACCATGGAATT +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLFHYFL*QGDHGI
Trigger: AATTCCATGGTCACCCTGTCACAGGAAGTAATGAAA...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTGAACCCCTGGTGGACTaGCCTTGTCTAGAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMAEPLVD*PCLESK
Trigger: CTTACTTTCTAGACAAGGTCAGTCCACCAGGGGTTC...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTAAAGAATGCTACCTCTaGGGCGATGAGCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMAKECYL*GDEPVA
Trigger: AGCAACTGGCTCATCGCCTCAGAGGTAGCATTCTTT...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTAGCTGGAGAACAGGATaGGGACATCAAAACCAAACT +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSASWRTG*GHQNQT
Trigger: AGTTTGGTTTTGATGTCCTCATCCTGTTCTCCAGCT...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAATCTAGGCAAGGGTTCTaGCACTCTTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSESRQGF*HSSSSQ
Trigger: CTGTGAGCTGGAAGAGTGTCAGAACCCTTGCCTAGA...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAACATTGGCATCCACCTaGGCCTGGTTAGAATCATTG +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPTLAST*AWLESL
Trigger: CAATGATTCTAACCAGGCTCAGGTGGATGCCAATGT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGCGGGGCTGTCGTCACTaGGGAAAACAGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKERGCRH*GKQSSP
Trigger: AGGAGAGCTCTGTTTTCCTCAGTGACGACAGCCCCG...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCACTACCCAGTTCAGGCTaGCCAAATTCAGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSLPSSG*PNSDSQ
Trigger: CTGGGAGTCTGAATTTGGTCAGCCTGAACTGGGTAG...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACTACCCAGTTCAGGCTaGCCAAATTCAGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPALPSSG*PNSDSQ
Trigger: CTGGGAGTCTGAATTTGGTCAGCCTGAACTGGGTAG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAACTACCCAGTTCAGGCTaGCCAAATTCAGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKLPSSG*PNSDSQ
Trigger: CTGGGAGTCTGAATTTGGTCAGCCTGAACTGGGTAG...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGACTGTTGCAGTGACTaGGGAGGAATGTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSDCCSD*GGMSVS
Trigger: GGAGACTGACATTCCTCCTCAGTCACTGCAACAGTC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGACTGTTGCAGTGACTaGGGAGGAATGTCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVDCCSD*GGMSVS
Trigger: GGAGACTGACATTCCTCCTCAGTCACTGCAACAGTC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAATCATTGTCCATATCTaGGATCGTTGCAGTGGACTG +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSIIVHI*DRCSGL
Trigger: CAGTCCACTGCAACGATCTCAGATATGGACAATGAT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAACTTTGTCCATCGCCATaGCCTTTCCATGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKLCPSP*PFHGSG
Trigger: CCCAGATCCATGGAAAGGTCATGGCGATGGACAAAG...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTTCTGGTTCCTCGGTTTaGGGACTGAAAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMASGSSV*GLKVTA
Trigger: TGCTGTCACTTTCAGTCCTCAAACCGAGGAACCAGA...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAACTCAGTAGTTTCACCTaGATTTCTTTGACTCATGAG +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTELSSFT*ISLTHE
Trigger: CTCATGAGTCAAAGAAATTCAGGTGAAACTACTGAG...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAGAAATTCATCCCATCTaGAGTCTCAGTAGTTTCACC +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLEIHPI*SLSSFT
Trigger: GGTGAAACTACTGAGACTTCAGATGGGATGAATTTC...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGTCACAGAATGGGTTTaGCTTATTCTCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGVTEWV*LILILC
Trigger: GCAGAGAATGAGAATAAGTCAAACCCATTCTGTGAC...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTCCAGAAAGGGTGACTaGTGGTTGTCACTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSASRKGD*WLSLKG
Trigger: TCCTTTTAGTGACAACCATCAGTCACCCTTTCTGGA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAGGCAGCATGGTGTCCTaGCACTGCTCTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRGSMVS*HCSWVG
Trigger: ACCTACCCAAGAGCAGTGTCAGGACACCATGCTGCC...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTAAGGCTGTGTCCGGATaGTCACAGACTGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVKAVSG*SQTGSM
Trigger: CATGCTGCCAGTCTGTGATCATCCGGACACAGCCTT...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAAAGGCTGTGTCCGGATaGTCACAGACTGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEKAVSG*SQTGSM
Trigger: CATGCTGCCAGTCTGTGATCATCCGGACACAGCCTT...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCTATTTTCCTCTGCGTaGGTAAAGGCTGTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGLFSSA*VKAVSG
Trigger: TCCGGACACAGCCTTTACTCACGCAGAGGAAAATAG...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGGACCTGAGGCATCGCTaGAACTGTGGTCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLDLRHR*NCGQRQ
Trigger: CTGCCTTTGACCACAGTTTCAGCGATGCCTCAGGTC...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACGACCTGAGGCATCGCTaGAACTGTGGTCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHDLRHR*NCGQRQ
Trigger: CTGCCTTTGACCACAGTTTCAGCGATGCCTCAGGTC...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTCCACGAGGCTTCAGATaGGCAGATATCTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCPRGFR*ADILLP
Trigger: GGGAAGCAAGATATCTGCTCATCTGAAGCCTCGTGG...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTCCATGTGTAGTGCATaGCGATCTTCATTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGSMCSA*RSSFFS
Trigger: AGAGAAGAATGAAGATCGTCATGCACTACACATGGA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTTTAAGGAGGCTGGCTaGCATGTGTCTGGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALFKEAG*HVSGKL
Trigger: AAGCTTCCCAGACACATGTCAGCCAGCCTCCTTAAA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATCTTCTGTGATTGGCTaGCTGGACCAGAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPASSVIG*LDQRLP
Trigger: AGGAAGCCTCTGGTCCAGTCAGCCAATCACAGAAGA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCTACCAAATGATTTTTaGGTAGGCCACCTTGCACTT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGLPNDF*VGHLAL
Trigger: AAGTGCAAGGTGGCCTACTCAAAAATCATTTGGTAG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGGGTAATCCGCCCGACTaGTGTCTGGCAGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLGNPPD*CLAENR
Trigger: CCTGTTTTCTGCCAGACAGCAGTCGGGCGGATTACC...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTTGAAGAGGTCGAAGTaGTCACCGTGTTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYLKRSK*SPCSPD
Trigger: GTCTGGAGAACACGGTGAGCACTTCGACCTCTTCAA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTGCTGGGGAGTAGTCTaGAGAATGAGAAGATTGCTG +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSCWGVV*RMRRLL
Trigger: CAGCAATCTTCTCATTCTGCAGACTACTCCCCAGCA...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTCTTGAATATCATTaGTACCCAGTTCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLCLEYH*YPVQAD
Trigger: GTCAGCCTGAACTGGGTAGCAATGATATTCAAGACA...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGAATGGCGCCACAGCTaGTGGTTCACCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSEWRHS*WFTIIC
Trigger: ACAGATGATGGTGAACCAGCAGCTGTGGCGCCATTC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAGGCAAACCCACTTTTTaGCATGGCCCACTCATTCGG +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEGKPTF*HGPLIR
Trigger: CCGAATGAGTGGGCCATGGCAAAAAGTGGGTTTGCC...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGAGTTGGTGCTGCTGTaGAAAAGTGTGAGTTGTCGG +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYELVLL*KSVSCR
Trigger: CCGACAACTCACACTTTTGCACAGCAGCACCAACTC...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAGCACTGTCCTTGGTATaGTCATCAGAGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLALSLV*SSEAGS
Trigger: GCTCCCTGCCTCTGATGAGCATACCAAGGACAGTGC...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGGATGCTGCATCACTTTaGAGGGTTTCCCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALDAASL*RVSLSV
Trigger: CACAGAGAGGGAAACCCTGCAAAGTGATGCAGCATC...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTAGTCGCCAAGGATGCTaGATCACTTTGCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMASRQGC*ITLQGF
Trigger: GAAACCCTGCAAAGTGATGCAGCATCCTTGGCGACT...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCACCTAGTCGCCAAGGATaGTGCATCACTTTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSPSRQG*CITLQG
Trigger: ACCCTGCAAAGTGATGCAGCATCCTTGGCGACTAGG...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCATCCTCTTCATCAAGGTaGCCCCTGTCAGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSASSSSR*PLSVAP
Trigger: GGGAGCCACTGACAGGGGGCACCTTGATGAAGAGGA...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTAGTTCCTGGTCACTCTaGCCTTTTTCAGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSASSWSL*PFSEIP
Trigger: AGGGATTTCTGAAAAAGGGCAGAGTGACCAGGAACT...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCAGTTCCTGGTCACTCTaGCCTTTTTCAGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALSSWSL*PFSEIP
Trigger: AGGGATTTCTGAAAAAGGGCAGAGTGACCAGGAACT...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTCCTGATGTTCAGATaGAACCAGAGAAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFFLMFR*NQRRQF
Trigger: GAACTGTCTTCTCTGGTTGCATCTGAACATCAGGAA...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAATGGCTGCAGGTTATCTaGGGACATCCCTGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKWLQVI*GHPCLH
Trigger: GTGCAAACAGGGATGTCCGCAGATAACCTGCAGCCA...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACTCTGGCTGCACAGTTaGAGAAATGTCATGTTCATT +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLLWLHS*RNVMFI
Trigger: AATGAACATGACATTTCTGCAACTGTGCAGCCAGAG...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGCTTTGGGAGATATTTaGCATGCAACATCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGALGDI*HATSPV
Trigger: AACAGGAGATGTTGCATGGCAAATATCTCCCAAAGC...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTACAACTATTTTCCTCTaGGTGAGTAAAGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGTTIFL*VSKGCV
Trigger: GACACAGCCTTTACTCACGCAGAGGAAAATAGTTGT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCAGGATTCTCACCATCTaGTTTCAAACTGAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFRILTI*FQTEGL
Trigger: AAGCCCTTCAGTTTGAAAGCAGATGGTGAGAATCCT...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACGGAAGCCTGAGAATTaGTGTCATGTTCGCAGTGCG +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPARKPEN*CHVRSA
Trigger: CGCACTGCGAACATGACAGCAATTCTCAGGCTTCCG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTATGCAAGCACTGAGGTaGTTCTCAGTCTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAMQALR*FSVSCF
Trigger: AAAGCAAGAGACTGAGAAGCACCTCAGTGCTTGCAT...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGATGCAAGCACTGAGGTaGTTCTCAGTCTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVMQALR*FSVSCF
Trigger: AAAGCAAGAGACTGAGAAGCACCTCAGTGCTTGCAT...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTATTCAGAATCGAGTTCTaGATTGGATGGGACAAACTC +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLFRIEF*IGWDKL
Trigger: GAGTTTGTCCCATCCAATGCAGAACTCGATTCTGAA...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCATGGAGGCAGCACAGTTaGGTTTTCAGAATCGAGTTC +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPWRQHS*VFRIEF
Trigger: GAACTCGATTCTGAAAACGCAACTGTGCTGCCTCCA...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCATCAAACAAAGCTCTTaGACCAGGCTGACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALIKQSS*TRLTFR
Trigger: CCTGAAAGTCAGCCTGGTGCAAGAGCTTTGTTTGAT...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAGGGAGGTGTGTACGGTaGCAGCGACTGCTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRGRCVR*QRLLQR
Trigger: TCTCTGAAGCAGTCGCTGGCACCGTACACACCTCCC...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGGGTCTTCACGAATATaGAGCACAGCCAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVGSSRI*STASWD
Trigger: ATCCCAGCTGGCTGTGCTGCATATTCGTGAAGACCC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAGGGTCTTCACGAATATaGAGCACAGCCAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRGSSRI*STASWD
Trigger: ATCCCAGCTGGCTGTGCTGCATATTCGTGAAGACCC...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCACCTCCTTCTTGGGGTTaGACCATTCAAGTACACAAT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSPPSWG*TIQVHN
Trigger: ATTGTGTACTTGAATGGTGCAACCCCAAGAAGGAGG...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAGACTTAGCTGTGGTTTaGCACCCCACCTCACTAGAG +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRDLAVV*HPTSLE
Trigger: CTCTAGTGAGGTGGGGTGGCAAACCACAGCTAAGTC...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGAATCTTTGTTGGCTGTaGGATCTTCATGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVNLCWL*DLHGQC
Trigger: ACACTGGCCATGAAGATCCCACAGCCAACAAAGATT...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000428286.5
CDS-3UTR CCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTGGCCAGAATCTTTGTTaGCTGTGGGATCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTGQNLC*LWDLHG
Trigger: GCCATGAAGATCCCACAGCCAACAAAGATTCTGGCC...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000428286.5
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATGGCCAGAATCTTTGTTaGCTGTGGGATCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANGQNLC*LWDLHG
Trigger: GCCATGAAGATCCCACAGCCAACAAAGATTCTGGCC...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000428286.5
CDS-3UTR CCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCATAGACTCTGACTCTTaGCCAGAATCTTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFIDSDS*PESLLA
Trigger: AGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTAT...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGGGCCCAATAACCACATaGACCTTCTCCAAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALGPITT*TFSKRL
Trigger: CAAACGCTTGGAGAAGGTCCATGTGGTTATTGGGCC...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGAGCTCAGGAGCCTCTTaGAGAATCTCCTTTAGCACG +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWSSGAS*RISFST
Trigger: CGTGCTAAAGGAGATTCTCCAAGAGGCTCCTGAGCT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTGCATGGGTCTGAGGTaGCCCCATGTGACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLCMGLR*PHVTCV
Trigger: GACACAGGTCACATGGGGCCACCTCAGACCCATGCA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAAAGGTGACTTCTCCATaGGCAGGTTCTGGAACGGCA +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEKVTSP*AGSGTA
Trigger: TGCCGTTCCAGAACCTGCCCATGGAGAAGTCACCTT...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTTGGCGCCACAGCTGCTaGTTCACCATCATCTGTAGG +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVWRHSC*FTIICR
Trigger: CCTACAGATGATGGTGAACCAGCAGCTGTGGCGCCA...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGAAATGCACTCCAGGCTaGGAATGGCGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEKCTPG*EWRHSC
Trigger: GCAGCTGTGGCGCCATTCCCAGCCTGGAGTGCATTT...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAAAATGCACTCCAGGCTaGGAATGGCGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLKCTPG*EWRHSC
Trigger: GCAGCTGTGGCGCCATTCCCAGCCTGGAGTGCATTT...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAACCCACTTTTTGCCATaGCCCACTCATTCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPTHFLP*PTHSGP
Trigger: GGGACCCGAATGAGTGGGCCATGGCAAAAAGTGGGT...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAACCCACTTTTTGCCATaGCCCACTCATTCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHITHFLP*PTHSGP
Trigger: GGGACCCGAATGAGTGGGCCATGGCAAAAAGTGGGT...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCTTGCCCCAGATTTCTaGAGCTGCTTCATTGTTTAT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGLAPDF*SCFIVY
Trigger: ATAAACAATGAAGCAGCTCCAGAAATCTGGGGCAAG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTCAGTCTCCTCTGCCGTaGAGTTACCATCTTTTGACT +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSQSPLP*SYHLLT
Trigger: AGTCAAAAGATGGTAACTCCACGGCAGAGGAGACTG...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCACAGTTGCATCATGCTaGGGTCGTCGTAACTGGACT +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGTVASC*GRRNWT
Trigger: AGTCCAGTTACGACGACCCCAGCATGATGCAACTGT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGGTTCCAGAGGCTGCTaGCGCATCTGGGGAATGAGT +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLGSRGC*RIWGMS
Trigger: ACTCATTCCCCAGATGCGCCAGCAGCCTCTGGAACC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAGTGCCTCTGATTCACTaGTTCCAGAGGCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLVPLIH*FQRLLA
Trigger: CGCCAGCAGCCTCTGGAACCAGTGAATCAGAGGCAC...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAGTGCCTCTGATTCACTaGTTCCAGAGGCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAVPLIH*FQRLLA
Trigger: CGCCAGCAGCCTCTGGAACCAGTGAATCAGAGGCAC...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCAGAGAAGACAGTTCCTaGTCACTCTGCCCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALREDSS*SLCPFS
Trigger: TGAAAAAGGGCAGAGTGACCAGGAACTGTCTTCTCT...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAAGACGAACCGGCTCCTaGAAGGCTATTTTCAGACCC +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRRRTGS*KAIFRP
Trigger: GGGTCTGAAAATAGCCTTCCAGGAGCCGGTTCGTCT...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCCAGAACTGGGTTGCTaGCCCCAGGAGGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLPELGC*PQEDSA
Trigger: TGCACTGTCCTCCTGGGGCCAGCAACCCAGTTCTGG...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTACTTGATACCCAGAACTaGGTTGCTGGCCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLLDTQN*VAGPRR
Trigger: CCTCCTGGGGCCAGCAACCCAGTTCTGGGTATCAAG...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTGACCCTGGCATCCTCTaGCTGCACAGTTGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCDPGIL*LHSCRN
Trigger: ATTTCTGCAACTGTGCAGCCAGAGGATGCCAGGGTC...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCAGCAACGTGGCAGTTaGCCACCTGGATCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVQQRGS*PPGSLP
Trigger: AGGAAGAGATCCAGGTGGCCAACTGCCACGTTGCTG...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTCATCCTCAGCAACGTaGCAGTTGGCCACCTGGATC +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHSSSAT*QLATWI
Trigger: GATCCAGGTGGCCAACTGCCACGTTGCTGAGGATGA...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTATCATCCTCAGCAACGTaGCAGTTGGCCACCTGGATC +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLSSSAT*QLATWI
Trigger: GATCCAGGTGGCCAACTGCCACGTTGCTGAGGATGA...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTGTTGTCCCTGTTTCTaGAGAAGATCTCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFCCPCF*RRSLLL
Trigger: AAGGAGAAGAGATCTTCTCCAGAAACAGGGACAACA...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAATTAGTCTCCCTTCCTaGGGTGAGGCCTTCCACCAC +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPISLPS*GEAFHH
Trigger: GTGGTGGAAGGCCTCACCCCAGGAAGGGAGACTAAT...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTACTCCCCAGGGACTaGCATTTTGGTGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYVLPRD*HFGVLK
Trigger: CTTCAGTACACCAAAATGCCAGTCCCTGGGGAGTAC...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTGGGTCTGGCTGCCTTaGTTGAATGTTCCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGWVWLP*LNVPEL
Trigger: CAACTCTGGAACATTCAACCAAGGCAGCCAGACCCA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTTGGGTCTGGCTGCCTTaGTTGAATGTTCCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMAWVWLP*LNVPEL
Trigger: CAACTCTGGAACATTCAACCAAGGCAGCCAGACCCA...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTGTCAGCATCTGGGTCTaGCTGCCTTGGTTGAATGTT +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMAVSIWV*LPWLNV
Trigger: AACATTCAACCAAGGCAGCCAGACCCAGATGCTGAC...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAATCCCATTCAGAGCCTaGCTTCATTATCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSIPFRA*LHYQLG
Trigger: ACCCAACTGATAATGAAGCCAGGCTCTGAATGGGAT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGGTCACCTTCTGGAGTTaGCTCTTGGTGAGTTACAAA +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVVTFWS*LLVSYK
Trigger: TTTGTAACTCACCAAGAGCCAACTCCAGAAGGTGAC...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCAGAACCGTCACCTTCTaGAGTTGGCTCTTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGRTVTF*SWLLVS
Trigger: ACTCACCAAGAGCCAACTCCAGAAGGTGACGGTTCT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATGCAGCACAGCCAGCTaGGATCCAGGCAGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQICSTAS*DPGSLF
Trigger: AAACAGACTGCCTGGATCCCAGCTGGCTGTGCTGCA...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAATGCAGCACAGCCAGCTaGGATCCAGGCAGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTECSTAS*DPGSLF
Trigger: AAACAGACTGCCTGGATCCCAGCTGGCTGTGCTGCA...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGATGGAGACAAAATGTTaGAGCCTGCTCCTACCGGCA +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWMETKC*SLLLPA
Trigger: TGCCGGTAGGAGCAGGCTCCAACATTTTGTCTCCAT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAGCTGGCACCATTTGGTaGTCCTATGTCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLAGTIW*SYVSTC
Trigger: GCAGGTGGAGACATAGGACCACCAAATGGTGCCAGC...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTCTGATATTTCCTTGCTaGCACCATTTGGTGGTCCTA +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSALIFPC*HHLVVL
Trigger: TAGGACCACCAAATGGTGCCAGCAAGGAAATATCAG...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGGCCAGAATCTTTGTTaGCTGTGGGATCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSGQNLC*LWDHGQ
Trigger: CTGGCCATGATCCCACAGCCAACAAAGATTCTGGCC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGGCCAGAATCTTTGTTaGCTGTGGGATCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVGQNLC*LWDHGQ
Trigger: CTGGCCATGATCCCACAGCCAACAAAGATTCTGGCC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCATGGCATCCTCCTTCTTaGGGTTGCACCATTCAAGTA +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPWHPPS*GCTIQV
Trigger: TACTTGAATGGTGCAACCCCAAGAAGGAGGATGCCA...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGTGGATGCAATCCATTaGGATCAGCCCACTGAGTTC +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWVDAIH*DQPTEF
Trigger: GAACTCAGTGGGCTGATCCCAATGGATTGCATCCAC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAATGCTCTCTGGAATGTaGATGCAATCCATTGGGATC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSMLSGM*MQSIGI
Trigger: GATCCCAATGGATTGCATCCACATTCCAGAGAGCAT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCACCTCTTCTTCCAGCATaGCCAACTAAGGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSPLLPA*PTKAFL
Trigger: AAGAAAAGCCTTAGTTGGCCATGCTGGAAGAAGAGG...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
3UTR CAA 72 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTaGCACCACTACACTGAACACTGGATTTTTCATTAC +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSG*HHYTEHWIFHY
Trigger: GTAATGAAAAATCCAGTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACATCCTCCGTGAGAAATaGCTCTCCTGTAGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHILREK*LSCRAR
Trigger: TCGAGCCCTACAGGAGAGTCATTTCTCACGGAGGAT...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS-3UTR TCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAAGGCGGCAAACACAATaGTGGCATTTAGACCGTCCC +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIRRQTQ*WHLDRP
Trigger: GGGACGGTCTAAATGCCATCATTGTGTTTGCCGCCT...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGACAGCTCTCCCCAATaGATTTTCCACCATGAGACT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYDSSPQ*IFHHET
Trigger: AGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTC...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTTAATCAAGGAGCTTTaGGAAACAATGCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLLIKEL*ETMLLP
Trigger: GGGCAAAAGCATTGTTTCTCAAAGCTCCTTGATTAA...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGAAGGGAACAAACTACTaGGGCATTGTGATAAGACGA +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVKGTNY*GIVIRR
Trigger: TCGTCTTATCACAATGCCTCAGTAGTTTGTTCCCTT...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATCAGCTCCATGTTTTCTaGGTACACAGCAATCTGTCG +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYQLHVF*VHSNLS
Trigger: CGACAGATTGCTGTGTACTCAGAAAACATGGAGCTG...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGTCTAGGCAAGGGTTCTaGCACTCTTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLSRQGF*HSSSSQ
Trigger: CTGTGAGCTGGAAGAGTGTCAGAACCCTTGCCTAGA...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGCTGGAGGGTTCTCTATaGAATTCACAGAGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALLEGSL*NSQSWV
Trigger: AACCCAGCTCTGTGAATTTCATAGAGAACCCTCCAG...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTACATTGGCATCCACCTaGGCCTGGTTAGAATCATTG +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTTLAST*AWLESL
Trigger: CAATGATTCTAACCAGGCTCAGGTGGATGCCAATGT...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGTGCTGGGTCAAAATTaGAGAGGTCGAAGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSVLGQN*RGRSAH
Trigger: GTGAGCACTTCGACCTCTTCAATTTTGACCCAGCAC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTATTGAAATACAGAATCTaGGGCTCTCCTATCAATGGA +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLLKYRI*GSPING
Trigger: TCCATTGATAGGAGAGCCTCAGATTCTGTATTTCAA...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGTGTATTTGGCAAAGGTaGCTTCTCCATGGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWCIWQR*LLHGQV
Trigger: AACCTGCCCATGGAGAAGTCACCTTTGCCAAATACA...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTCCAGGTGCAAAGATGTaGTCCCTGGAGTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTPGAKM*SLESLF
Trigger: AAACAATGACTCCAGGGATCACATCTTTGCACCTGG...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTCCAGGTGCAAAGATGTaGTCCCTGGAGTCATTGTTT +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMAPGAKM*SLESLF
Trigger: AAACAATGACTCCAGGGATCACATCTTTGCACCTGG...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAATCGTTGCAGTGGACTaGGTATCCTCCAAAATCACT +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPIVAVD*VSSKIT
Trigger: AGTGATTTTGGAGGATACTCAGTCCACTGCAACGAT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTGGCGCATCTGGGGAATaGGTGTCTTTAACATTTGCT +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTGASGE*VSLTFA
Trigger: AGCAAATGTTAAAGACACTCATTCCCCAGATGCGCC...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGGCGCATCTGGGGAATaGGTGTCTTTAACATTTGCT +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWGASGE*VSLTFA
Trigger: AGCAAATGTTAAAGACACTCATTCCCCAGATGCGCC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATAGATATAAGTGCCTCTaGTTCACTGGTTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYRYKCL*FTGSRG
Trigger: GCCTCTGGAACCAGTGAATCAGAGGCACTTATATCT...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCAGATATAAGTGCCTCTaGTTCACTGGTTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGRYKCL*FTGSRG
Trigger: GCCTCTGGAACCAGTGAATCAGAGGCACTTATATCT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATCCTGCTTGTCAAGATaGGATATAAGTGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSSCLSR*DISASD
Trigger: ATCAGAGGCACTTATATCTCATCTTGACAAGCAGGA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGATCTGGTTCCTCGGTTTaGGGACTGAAAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRSGSSV*GLKVTA
Trigger: TGCTGTCACTTTCAGTCCTCAAACCGAGGAACCAGA...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGCAGAACATGTGCTGCTaGCATGCACATCACTGTCTA +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALQNMCC*HAHHCL
Trigger: TAGACAGTGATGTGCATGTCAGCAGCACATGTTCTG...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATCAGAACATGTGCTGCTaGCATGCACATCACTGTCTA +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYQNMCC*HAHHCL
Trigger: TAGACAGTGATGTGCATGTCAGCAGCACATGTTCTG...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCCTTGGTTTTCTTCTTaGTACCCAGAACTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGPWFSS*YPELGC
Trigger: GCAACCCAGTTCTGGGTATCAAGAAGAAAACCAAGG...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCAGTTCAGATTCTTGGTaGTTCTGTTCACTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALSSDSW*FCSLQL
Trigger: CAACTGGAGTGAACAGAATCACCAAGAATCTGAACT...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATACTGAGCTTGTTGAAATaGCCCTGGCATCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHILSLLK*PWHPLA
Trigger: AGCCAGAGGATGCCAGGGTCATTTCAACAAGCTCAG...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGCTGAGCTTGTTGAAATaGCCCTGGCATCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLLSLLK*PWHPLA
Trigger: AGCCAGAGGATGCCAGGGTCATTTCAACAAGCTCAG...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCGTCACAGAATGGGTTTaGCTTATTCTCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALVTEWV*LILILC
Trigger: GCAGAGAATGAGAATAAGTCAAACCCATTCTGTGAC...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACTCAGTGCTATCAGCTaGGAAGCCCAGCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTELSAIS*EAQHFQ
Trigger: CTGGAAATGCTGGGCTTCTCAGCTGATAGCACTGAG...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTGGCTCAATATCACCCTaGACTGGTACTCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSGSISP*TGTPQG
Trigger: TCCCTGGGGAGTACCAGTTCAGGGTGATATTGAGCC...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATCTGGCTGCCTTGGTTaGATGTTCCAGAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPASGCLG*MFQSCS
Trigger: TGAGCAACTCTGGAACATTCAACCAAGGCAGCCAGA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTCTATTTTCCTCTGCGTaGGTAAAGGCTGTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCLFSSA*VKAVSG
Trigger: TCCGGACACAGCCTTTACTCACGCAGAGGAAAATAG...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAGGGCTGTCGGAAGCCTaGGAATTGCTGTCATGTTCG +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAGLSEA*ELLSCS
Trigger: CGAACATGACAGCAATTCTCAGGCTTCCGACAGCCC...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATTCAGAAGGTTCAGGTaGACCTTTATGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAFRRFR*TFMRGG
Trigger: CCCGCCTCTCATAAAGGTTCACCTGAACCTTCTGAA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTTTCAGAAGGTTCAGGTaGACCTTTATGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCFRRFR*TFMRGG
Trigger: CCCGCCTCTCATAAAGGTTCACCTGAACCTTCTGAA...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAGGAGAAAAGCTGTCTaGTATCCAAGAACCGTCACC +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANRRKAV*YPRTVT
Trigger: GGTGACGGTTCTTGGATATCAGACAGCTTTTCTCCT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATAGGAGAAAAGCTGTCTaGTATCCAAGAACCGTCACC +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYRRKAV*YPRTVT
Trigger: GGTGACGGTTCTTGGATATCAGACAGCTTTTCTCCT...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCAGGAGAAAAGCTGTCTaGTATCCAAGAACCGTCACC +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGRRKAV*YPRTVT
Trigger: GGTGACGGTTCTTGGATATCAGACAGCTTTTCTCCT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAGCTCTTGCACCAGGCTaGCTTTCAGGAGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIALAPG*LSGEKL
Trigger: CAGCTTTTCTCCTGAAAGTCAGCCTGGTGCAAGAGC...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAGGATGTGTTGAGACCTaGGGCATCGCTGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIGCVET*GIAETV
Trigger: CACAGTTTCAGCGATGCCTCAGGTCTCAACACATCC...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGTTCCCAGTCAACGTTTaGTGGAGACAAAATGTTGGA +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVFPVNV*WRQNVG
Trigger: TCCAACATTTTGTCTCCATCAAACGTTGACTGGGAA...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGGGAAGCTTGCTAACTaGGTTCCCTGCAGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEGKLAN*VPCSPV
Trigger: AACAGGGCTGCAGGGAACTCAGTTAGCAAGCTTCCC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGATTTAAGGAGGCTGGCTaGCATGTGTCTGGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRFKEAG*HVSGKL
Trigger: AAGCTTCCCAGACACATGTCAGCCAGCCTCCTTAAA...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGGGATCATGTTTTTCTaGACAGGCTGTGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYGIMFF*TGCGES
Trigger: GCTTTCACCACAGCCTGTTCAGAAAAACATGATCCC...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGTTTCAACAGAACCATaGACCAGAAAAGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSVSTEP*TRKASS
Trigger: AGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAAC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGGTTTCAACAGAACCATaGACCAGAAAAGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVVSTEP*TRKASS
Trigger: AGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAAC...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAGCCCGGCTTCCCTTTaGGAAGTTAAAGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANSPASL*EVKGDS
Trigger: AGAATCTCCTTTAACTTCTCAAAGGGAAGCCGGGCT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTGGTAACCTCTGGAGCTaGGTTTATGGCCTGAAACTC +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCGNLWS*VYGLKL
Trigger: GAGTTTCAGGCCATAAACTCAGCTCCAGAGGTTACC...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAGGTAACCTCTGGAGCTaGGTTTATGGCCTGAAACTC +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAGNLWS*VYGLKL
Trigger: GAGTTTCAGGCCATAAACTCAGCTCCAGAGGTTACC...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCAGAGGCCTACAGACTTaGAATCTTGTTGGCATTTTA +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFRGLQT*NLVGIL
Trigger: TAAAATGCCAACAAGATTTCAAGTCTGTAGGCCTCT...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCTCCTCCGTGAGAAATaGCTCTCCTGTAGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLLLREK*LSCRAR
Trigger: TCGAGCCCTACAGGAGAGTCATTTCTCACGGAGGAG...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTACTCCTCCGTGAGAAATaGCTCTCCTGTAGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLLLREK*LSCRAR
Trigger: TCGAGCCCTACAGGAGAGTCATTTCTCACGGAGGAG...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443509.6
CDS-3UTR GCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTCAGGCCTCATGTCTaGAGCACTGGGACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSFRPHV*STGTQH
Trigger: GTGCTGAGTCCCAGTGCTGCAGACATGAGGCCTGAA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGTTCAGGCCTCATGTCTaGAGCACTGGGACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEFRPHV*STGTQH
Trigger: GTGCTGAGTCCCAGTGCTGCAGACATGAGGCCTGAA...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTTCAGGCCTCATGTCTaGAGCACTGGGACTCAGCAC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLFRPHV*STGTQH
Trigger: GTGCTGAGTCCCAGTGCTGCAGACATGAGGCCTGAA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGGTACTCAAAAGAATCTaGTTCATCGGGGGTATCAAG +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVVLKRI*FIGGIK
Trigger: CTTGATACCCCCGATGAAGCAGATTCTTTTGAGTAC...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGTACTCAAAAGAATCTaGTTCATCGGGGGTATCAAG +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSVLKRI*FIGGIK
Trigger: CTTGATACCCCCGATGAAGCAGATTCTTTTGAGTAC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCATTCATGTCAATGCGCTaGTCTTGTTCTCCAATGACC +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPFMSMR*SCSPMT
Trigger: GGTCATTGGAGAACAAGAGCAGCGCATTGACATGAA...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTCTATGCCCTCAGGTTTaGACCACTACACTGAACACT +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMALCPQV*TTTLNT
Trigger: AGTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAG...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTGAGAAACAATGCTTTTaGCCCAATGACCCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSEKQCF*PNDPLV
Trigger: AACCAAGGGGTCATTGGGGCAAAAGCATTGTTTCTC...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGCACTCGCCAGCACACTaGTGCCAACAAGTGTTATCG +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLHSPAH*CQQVLS
Trigger: CGATAACACTTGTTGGCAGCAGTGTGCTGGCGAGTG...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATACACTCGCCAGCACACTaGTGCCAACAAGTGTTATCG +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIHSPAH*CQQVLS
Trigger: CGATAACACTTGTTGGCAGCAGTGTGCTGGCGAGTG...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATTGAAGAGGTCGAAGTaGTCACCGTGTTCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPALKRSK*SPCSPD
Trigger: GTCTGGAGAACACGGTGAGCACTTCGACCTCTTCAA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAACCCAGAAGCCATGGGTaGTGGGTCAAAATTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEPRSHG*WVKIEE
Trigger: CTCTTCAATTTTGACCCAGCACCCATGGCTTCTGGG...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGAAGATTGCTGGGACTaGCCAGAAGCCATGGGTGCT +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEEDCWD*PEAMGA
Trigger: AGCACCCATGGCTTCTGGGCAGTCCCAGCAATCTTC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTGCTGGGGAGTAGTCTaGAGAATGAGAAGATTGCTG +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGCWGVV*RMRRLL
Trigger: CAGCAATCTTCTCATTCTGCAGACTACTCCCCAGCA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAGGGGAAGAAGTCATCTaGTGGGGAGTAGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEGEEVI*WGVVCR
Trigger: TCTGCAGACTACTCCCCAGCAGATGACTTCTTCCCC...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGGAGAGCGACCAGAATaGCACAAAGAAGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWGERPE*HKEAKS
Trigger: AGACTTTGCTTCTTTGTGGCATTCTGGTCGCTCTCC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATCAGAAGGTGTCTTGCTaGTTGTTGGGTGCAAATTCC +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYQKVSC*LLGANS
Trigger: GGAATTTGCACCCAACAAGCAGCAAGACACCTTCTG...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACGGCAAACCCACTTTTTaGCATGGCCCACTCATTCGG +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHGKPTF*HGPLIR
Trigger: CCGAATGAGTGGGCCATGGCAAAAAGTGGGTTTGCC...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATACTGGGATTTCCAGGTaGAAAGATGTGATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANTGISR*KDVIPG
Trigger: TCCAGGGATCACATCTTTGCACCTGGAAATCCCAGT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGACTGGGATTTCCAGGTaGAAAGATGTGATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWTGISR*KDVIPG
Trigger: TCCAGGGATCACATCTTTGCACCTGGAAATCCCAGT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTACTGGGATTTCCAGGTaGAAAGATGTGATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMATGISR*KDVIPG
Trigger: TCCAGGGATCACATCTTTGCACCTGGAAATCCCAGT...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAATGTACAGTTGCATCATaGTGGGGTCGTCGTAACTGG +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSECTVAS*WGRRNW
Trigger: CCAGTTACGACGACCCCAGCATGATGCAACTGTACA...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTGTACAGTTGCATCATaGTGGGGTCGTCGTAACTGG +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVCTVAS*WGRRNW
Trigger: CCAGTTACGACGACCCCAGCATGATGCAACTGTACA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGGTTTCATTGTACAGTTaGATCATGCTGGGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALVSLYS*IMLGSS
Trigger: CGACGACCCCAGCATGATGCAACTGTACAATGAAAC...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTGTTTCATTGTACAGTTaGATCATGCTGGGGTCGTCG +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTVSLYS*IMLGSS
Trigger: CGACGACCCCAGCATGATGCAACTGTACAATGAAAC...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAGAGTTGGTGCTGCTGTaGAAAAGTGTGAGTTGTCGG +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAELVLL*KSVSCR
Trigger: CCGACAACTCACACTTTTGCACAGCAGCACCAACTC...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCACCAATCTACCTGATTTaGTTCCTGATACTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPPIYLI*FLILQA
Trigger: GGCTTGGAGTATCAGGAAGCAAATCAGGTAGATTGG...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTAGTCGCCAAGGATGCTaGATCACTTTGCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVSRQGC*ITLQGF
Trigger: GAAACCCTGCAAAGTGATGCAGCATCCTTGGCGACT...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTACCTAGTCGCCAAGGATaGTGCATCACTTTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLPSRQG*CITLQG
Trigger: ACCCTGCAAAGTGATGCAGCATCCTTGGCGACTAGG...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATTCCTGATGTTCAGATaGAACCAGAGAAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSFLMFR*NQRRQF
Trigger: GAACTGTCTTCTCTGGTTGCATCTGAACATCAGGAA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTCTGTTCACTCCAGTTaGCTTGGTTTTCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGSVHSS*LGFLLD
Trigger: ATCAAGAAGAAAACCAAGGCAACTGGAGTGAACAGA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTCCAGGGATCAGGGCTaGTTTGTTGATTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGSRDQG*FVDCHR
Trigger: TCTGTGACAATCAACAAAGCAGCCCTGATCCCTGGA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTCCAGGGATCAGGGCTaGTTTGTTGATTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYSRDQG*FVDCHR
Trigger: TCTGTGACAATCAACAAAGCAGCCCTGATCCCTGGA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGGGAGATATTTGCCATaGAACATCTCCTGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWGRYLP*NISCCP
Trigger: GGGACAACAGGAGATGTTGCATGGCAAATATCTCCC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCTTCCACCACTCAGTaGTATCAGCTGAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEPSTTQ*YQLRSP
Trigger: TGGGCTTCTCAGCTGATAGCACTGAGTGGTGGAAGG...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGCCTTCCACCACTCAGTaGTATCAGCTGAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLPSTTQ*YQLRSP
Trigger: TGGGCTTCTCAGCTGATAGCACTGAGTGGTGGAAGG...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATACCTTCCACCACTCAGTaGTATCAGCTGAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIPSTTQ*YQLRSP
Trigger: TGGGCTTCTCAGCTGATAGCACTGAGTGGTGGAAGG...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTACAACTATTTTCCTCTaGGTGAGTAAAGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSATTIFL*VSKGCV
Trigger: GACACAGCCTTTACTCACGCAGAGGAAAATAGTTGT...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATCTGTCATGTTCGCAGTaGGTCAGGATATCAGGATTC +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANLSCSQ*VRISGF
Trigger: GAATCCTGATATCCTGACGCACTGCGAACATGACAG...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACGGAAGCCTGAGAATTaGTGTCATGTTCGCAGTGCG +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTERKPEN*CHVRSA
Trigger: CGCACTGCGAACATGACAGCAATTCTCAGGCTTCCG...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGTTCCAAAATTGGTaGCATATCTGGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAWFQNW*HIWAGS
Trigger: GGAGCCAGCCCAGATATGGCACCAATTTTGGAACCA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTTACAAAAATGCTAGTTaGCACATTTTCAATCCTTGG +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSYKNAS*HIFNPW
Trigger: CCAAGGATTGAAAATGTGGCAACTAGCATTTTTGTA...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAATCAAACAAAGCTCTTaGACCAGGCTGACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPIKQSS*TRLTFR
Trigger: CCTGAAAGTCAGCCTGGTGCAAGAGCTTTGTTTGAT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGATGAGCAGATATCTTaGTTCCCTAGGTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWDEQIS*FPRSPS
Trigger: TGATGGGGACCTAGGGAAGCAAGATATCTGCTCATC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGCTATCTCTGCTGCTCTaGATCCCAGAGATTCATCCT +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALLSLLL*IPEIHP
Trigger: AGGATGAATCTCTGGGATGCAGAGCAGCAGAGATAG...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATAGAAAGCACTATCTCTaGTGCTCTGCATCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYRKHYL*CSASQR
Trigger: TCTCTGGGATGCAGAGCAGCAGAGATAGTGCTTTCT...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGTCATGGGTGACAGCCTaGAACGTAACTGCATCCGGG +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKESWVTA*NVTASG
Trigger: CCCGGATGCAGTTACGTTGCAGGCTGTCACCCATGA...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGAAACCATTCTTAGCTTaGAGTGGTGAGCGAGACTTA +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVKPFLA*SGERDL
Trigger: TAAGTCTCGCTCACCACTGCAAGCTAAGAATGGTTT...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCATCATGTCTGCAGCACTaGGACTCAGCACGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSASCLQH*DSARPL
Trigger: AAGAGGGCGTGCTGAGTCCCAGTGCTGCAGACATGA...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTGCTGTGGGATCTTCATaGCCAGTGTACTCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSAVGSS*PVYSKE
Trigger: TTCTTTTGAGTACACTGGCCATGAAGATCCCACAGC...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000428286.5
CDS-3UTR CCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAAATCTTTGTTGGCTGTaGGATCTTCATGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPNLCWL*DLHGQC
Trigger: ACACTGGCCATGAAGATCCCACAGCCAACAAAGATT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376717.6
ENST00000428286.5
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAATAGACTCTGACTCTTaGCCAGAATCTTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSIDSDS*PESLLA
Trigger: AGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTAT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTTATCTAAATACAAATTaGGGTGGAGTAGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSYLNTN*GGVGKD
Trigger: ATCCTTTCCTACTCCACCCCAATTTGTATTTAGATA...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCTGTAATAGGAGACACTaGAGACTAAGAATGGTTCCC +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALCNRRH*RLRMVP
Trigger: GGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACA...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTACCATGAGACTAGGGTaGAACCGCTCTCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLTMRLG*NRSHPF
Trigger: GAAGGGGTGAGAGCGGTTCCACCCTAGTCTCATGGT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTGGACTCCAAATATCCTaGACAGCTCTCCCCAATGAA +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTGLQIS*TALPNE
Trigger: TTCATTGGGGAGAGCTGTCCAGGATATTTGGAGTCC...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTGTCAACACTGTGTTCTaGGAGAGGTGTAATTTGGGC +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMAVNTVF*ERCNLG
Trigger: GCCCAAATTACACCTCTCCCAGAACACAGTGTTGAC...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAAATTCTTCCATGTCGTaGCTAGGGGTTTGGAACCCG +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKNSSMS*LGVWNP
Trigger: CGGGTTCCAAACCCCTAGCCACGACATGGAAGAATT...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTGGCCCAATAACCACATaGACCTTCTCCAAGCGTTTG +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCGPITT*TFSKRL
Trigger: CAAACGCTTGGAGAAGGTCCATGTGGTTATTGGGCC...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGACTCGGAACTCAACGTTaGCATCGCTCTGCTCAACCG +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRLGTQR*HRSAQP
Trigger: CGGTTGAGCAGAGCGATGCCAACGTTGAGTTCCGAG...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAGATGATGTCCTCTCTTaGAGGCAAGTTAGGAAATTT +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLDDVLS*RQVRKF
Trigger: AAATTTCCTAACTTGCCTCCAAGAGAGGACATCATC...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCACAGAGCTGGGTTGTaGCTCTATGTCAGAACCATA +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGHRAGL*LYVRTI
Trigger: TATGGTTCTGACATAGAGCCACAACCCAGCTCTGTG...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTCTACTAAACTATTCATaGGTGTTGGTGGGATCCTCT +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSALLNYS*VLVGSS
Trigger: AGAGGATCCCACCAACACCCATGAATAGTTTAGTAG...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTAGGCTGGTTCTTCAGTaGATGGCGAGCTTTCTACTA +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMARLVLQ*MASFLL
Trigger: TAGTAGAAAGCTCGCCATCCACTGAAGAACCAGCCT...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTGCATGGGTCTGAGGTaGCCCCATGTGACCTGTGTC +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLCMGLR*PHVTCV
Trigger: GACACAGGTCACATGGGGCCACCTCAGACCCATGCA...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAAAGGTGACTTCTCCATaGGCAGGTTCTGGAACGGCA +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPKVTSP*AGSGTA
Trigger: TGCCGTTCCAGAACCTGCCCATGGAGAAGTCACCTT...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTACCCACTTTTTGCCATaGCCCACTCATTCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLTHFLP*PTHSGP
Trigger: GGGACCCGAATGAGTGGGCCATGGCAAAAAGTGGGT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGCTTGCCCCAGATTTCTaGAGCTGCTTCATTGTTTAT +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVLAPDF*SCFIVY
Trigger: ATAAACAATGAAGCAGCTCCAGAAATCTGGGGCAAG...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTCGACGTCATCCTCCATaGAGATATTCTTACCATCTG +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSRRHPP*RYSYHL
Trigger: CAGATGGTAAGAATATCTCCATGGAGGATGACGTCG...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAGGCTGCTGGCGCATCTaGGGAATGAGTGTCTTTAAC +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLGCWRI*GMSVFN
Trigger: GTTAAAGACACTCATTCCCCAGATGCGCCAGCAGCC...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGTGTGGAAAATACCCTaGATTCTCAAGCCTAGTCGC +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGVWKIP*ILKPSR
Trigger: GCGACTAGGCTTGAGAATCCAGGGTATTTTCCACAC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGTGTGGAAAATACCCTaGATTCTCAAGCCTAGTCGC +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWVWKIP*ILKPSR
Trigger: GCGACTAGGCTTGAGAATCCAGGGTATTTTCCACAC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCATGAGGTGTTTTTCATaGGTATCTTTTGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALMRCFS*VSFGCR
Trigger: CCTGCAGCCAAAAGATACCCATGAAAAACACCTCAT...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAGACCCTGGCATCCTCTaGCTGCACAGTTGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPDPGIL*LHSCRN
Trigger: ATTTCTGCAACTGTGCAGCCAGAGGATGCCAGGGTC...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTATTAGTCTCCCTTCCTaGGGTGAGGCCTTCCACCAC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLISLPS*GEAFHH
Trigger: GTGGTGGAAGGCCTCACCCCAGGAAGGGAGACTAAT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGTACTCCCCAGGGACTaGCATTTTGGTGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVVLPRD*HFGVLK
Trigger: CTTCAGTACACCAAAATGCCAGTCCCTGGGGAGTAC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAGTACTCCCCAGGGACTaGCATTTTGGTGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKVLPRD*HFGVLK
Trigger: CTTCAGTACACCAAAATGCCAGTCCCTGGGGAGTAC...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAGTACTCCCCAGGGACTaGCATTTTGGTGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRVLPRD*HFGVLK
Trigger: CTTCAGTACACCAAAATGCCAGTCCCTGGGGAGTAC...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACCACAGACTGGCAGCATaGTGTCCTGACACTGCTCTT +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHHRLAA*CPDTAL
Trigger: AAGAGCAGTGTCAGGACACCATGCTGCCAGTCTGTG...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCACGGATGATCACAGACTaGCAGCATGGTGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPRMITD*QHGVLT
Trigger: TGTCAGGACACCATGCTGCCAGTCTGTGATCATCCG...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATACGGATGATCACAGACTaGCAGCATGGTGTCCTGACA +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIRMITD*QHGVLT
Trigger: TGTCAGGACACCATGCTGCCAGTCTGTGATCATCCG...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGTCGGGAGTCCTCACTTaGGGTAGAGCCATCCCATTC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKESGVLT*GRAIPF
Trigger: GAATGGGATGGCTCTACCCCAAGTGAGGACTCCCGA...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATTCTTCATCTATCTCTaGCTCAGTGAGACAAAGCTC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSFFIYL*LSETKL
Trigger: GAGCTTTGTCTCACTGAGCCAGAGATAGATGAAGAA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTTCTTCATCTATCTCTaGCTCAGTGAGACAAAGCTC +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAFFIYL*LSETKL
Trigger: GAGCTTTGTCTCACTGAGCCAGAGATAGATGAAGAA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTGCTTGATAGCCAATTaGAGGCAGCACAGTTGCGTT +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALCLIAN*RQHSCV
Trigger: AACGCAACTGTGCTGCCTCCAATTGGCTATCAAGCA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAAGAACCGTCACCTTCTaGAGTTGGCTCTTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSERTVTF*SWLLVS
Trigger: ACTCACCAAGAGCCAACTCCAGAAGGTGACGGTTCT...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAAGGCAGGATTCTCTGTaGATAAATGTGGATCACCAT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSRQDSL*INVDHH
Trigger: ATGGTGATCCACATTTATCCACAGAGAATCCTGCCT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACTGGCGTTTCCGGATaGCCTTCGGATAATGTCAGT +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSTGVSG*PSDNVS
Trigger: ACTGACATTATCCGAAGGCCATCCGGAAACGCCAGT...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAATGGAGACAAAATGTTaGAGCCTGCTCCTACCGGCA +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAMETKC*SLLLPA
Trigger: TGCCGGTAGGAGCAGGCTCCAACATTTTGTCTCCAT...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAGCTGGCACCATTTGGTaGTCCTATGTCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAAGTIW*SYVSTC
Trigger: GCAGGTGGAGACATAGGACCACCAAATGGTGCCAGC...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATACTTGCTGGCACCATTTaGTGGTCCTATGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHILAGTI*WSYVST
Trigger: GGTGGAGACATAGGACCACCAAATGGTGCCAGCAAG...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAAAGAACATCCAACTCTaGTCTTGTGCAGGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPKNIQL*SCAGLS
Trigger: TGAAAGCCCTGCACAAGACCAGAGTTGGATGTTCTT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGTTACTCTTCTGTGATTaGCTGACTGGACCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWLLFCD*LTGPEA
Trigger: AGCCTCTGGTCCAGTCAGCCAATCACAGAAGAGTAA...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTATGCTCTCTGGAATGTaGATGCAATCCATTGGGATC +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSMLSGM*MQSIGI
Trigger: GATCCCAATGGATTGCATCCACATTCCAGAGAGCAT...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCACCTCTTCTTCCAGCATaGCCAACTAAGGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPPLLPA*PTKAFL
Trigger: AAGAAAAGCCTTAGTTGGCCATGCTGGAAGAAGAGG...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTTTTGAGGCACATAATTaGCAAAATAGGAAAGTACAC +
Preference number: 4 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSFEAHN*QNRKVH
Trigger: GTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAA...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAAAAATAAAGTTGACGTaGATTAGAAAGCCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLKIKLT*IRKPGF
Trigger: GAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTT...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCATTGATGATGCTCTCTaGAATGTGGATGCAATCCAT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFIDDAL*NVDAIH
Trigger: ATGGATTGCATCCACATTCCAGAGAGCATCATCAAT...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCCAAGTTCATCCACATTaGTGTCAATTTCATCTGGAC +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALQVHPH*CQFHLD
Trigger: GTCCAGATGAAATTGACATCAATGTGGATGAACTTG...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTGCTCTTGTTCTCCAATaGCCACTGTCCTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSALVLQ*PLSSKA
Trigger: GGCTTTGGAGGACAGTGGTCATTGGAGAACAAGAGC...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAGCTCTTGTTCTCCAATaGCCACTGTCCTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAALVLQ*PLSSKA
Trigger: GGCTTTGGAGGACAGTGGTCATTGGAGAACAAGAGC...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCATCCTGTAGGGCTCGATaGCCTTCATGTCAATGCGCT +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSASCRAR*PSCQCA
Trigger: AGCGCATTGACATGAAGGTCATCGAGCCCTACAGGA...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTAGGCGGCAAACACAATaGTGGCATTTAGACCGTCCC +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSRRQTQ*WHLDRP
Trigger: GGGACGGTCTAAATGCCATCATTGTGTTTGCCGCCT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGGAAAAGATTTTCCATaGCATAGTGGTAATCCGCCC +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGGKDFP*HSGNPP
Trigger: GGGCGGATTACCACTATGTCATGGAAAATCTTTTCC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTGGAAAAGATTTTCCATaGCATAGTGGTAATCCGCCC +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMAGKDFP*HSGNPP
Trigger: GGGCGGATTACCACTATGTCATGGAAAATCTTTTCC...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGACAGAGGTGAAGCAATaGGGTCAGAGAAACTCAATC +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALTEVKQ*GQRNSI
Trigger: GATTGAGTTTCTCTGACCTCATTGCTTCACCTCTGT...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGACAGAGGTGAAGCAATaGGGTCAGAGAAACTCAATC +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWTEVKQ*GQRNSI
Trigger: GATTGAGTTTCTCTGACCTCATTGCTTCACCTCTGT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATACAAGCCAGATGTTATaGAGGAGGAGATCCAACAGA +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANTSQML*RRRSNR
Trigger: TCTGTTGGATCTCCTCCTTCATAACATCTGGCTTGT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTCTTCCTGTGACAGGGTaGCCATGGAATTCATTTTAC +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTLPVTG*PWNSFY
Trigger: GTAAAATGAATTCCATGGTCACCCTGTCACAGGAAG...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACAACAAGAGCCCTCTATaGACAGCTCTATGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHNKSPL*TALCPQ
Trigger: CTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTT...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTCTATTTACTTGGGGTaGATGTACATGGTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFSIYLG*MYMVAF
Trigger: AAAAGCTACCATGTACATTCACCCCAAGTAAATAGA...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAGAACCCCTGGTGGACTaGCCTTGTCTAGAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIEPLVD*PCLESK
Trigger: CTTACTTTCTAGACAAGGTCAGTCCACCAGGGGTTC...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATATTAAACCCTGAGCACTaGACTGGGTCTCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHILNPEH*TGSPVG
Trigger: TCCTACAGGAGACCCAGTTCAGTGCTCAGGGTTTAA...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTCTGGTAATATTGCTGTaGAATAGACAATTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLLVILL*NRQFSR
Trigger: CCTTGAGAATTGTCTATTTCACAGCAATATTACCAG...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATAGCTGGAGAACAGGATaGGGACATCAAAACCAAACT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYSWRTG*GHQNQT
Trigger: AGTTTGGTTTTGATGTCCTCATCCTGTTCTCCAGCT...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTCAGCTCCATGTTTTCTaGGTACACAGCAATCTGTCG +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVQLHVF*VHSNLS
Trigger: CGACAGATTGCTGTGTACTCAGAAAACATGGAGCTG...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAACTGATCACAAGTCACTaGAGGGTCCTCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSELITSH*RVLLLV
Trigger: TACCAACAAGAGGACCCTTCAGTGACTTGTGATCAG...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTCTGATCACAAGTCACTaGAGGGTCCTCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCLITSH*RVLLLV
Trigger: TACCAACAAGAGGACCCTTCAGTGACTTGTGATCAG...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAACTGGAGGGTTCTCTATaGAATTCACAGAGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSELEGSL*NSQSWV
Trigger: AACCCAGCTCTGTGAATTTCATAGAGAACCCTCCAG...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAGTGCTGGGTCAAAATTaGAGAGGTCGAAGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIVLGQN*RGRSAH
Trigger: GTGAGCACTTCGACCTCTTCAATTTTGACCCAGCAC...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTTATGCTCTTTCCATaGTTCAGGGCTCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWLMLFP*FRALEN
Trigger: GTTTTCCAGAGCCCTGAATCATGGAAAGAGCATAAG...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGAGACTCCCAGGGACCTaGCTTTGTAAATTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLRLPGT*LCKFEA
Trigger: AGCCTCGAATTTACAAAGTCAGGTCCCTGGGAGTCT...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAAGACTCCCAGGGACCTaGCTTTGTAAATTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTERLPGT*LCKFEA
Trigger: AGCCTCGAATTTACAAAGTCAGGTCCCTGGGAGTCT...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCCCAGGACCTGAACTaGTTCGATTTCGAGATGACT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVSQDLN*FDFEMT
Trigger: AGTCATCTCGAAATCGAATCAGTTCAGGTCCTGGGA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATCCCAGGACCTGAACTaGTTCGATTTCGAGATGACT +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPASQDLN*FDFEMT
Trigger: AGTCATCTCGAAATCGAATCAGTTCAGGTCCTGGGA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATATCATTGTCCATATCTaGGATCGTTGCAGTGGACTG +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYIIVHI*DRCSGL
Trigger: CAGTCCACTGCAACGATCTCAGATATGGACAATGAT...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTTTGCTCTGAATCTGTaGTATGTGAGGAGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYFALNL*YVRSLV
Trigger: TACCAGGCTCCTCACATATCACAGATTCAGAGCAAA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGGCGCATCTGGGGAATaGGTGTCTTTAACATTTGCT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVGASGE*VSLTFA
Trigger: AGCAAATGTTAAAGACACTCATTCCCCAGATGCGCC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCTTTGTCCATCGCCATaGCCTTTCCATGGATCTGGG +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLLCPSP*PFHGSG
Trigger: CCCAGATCCATGGAAAGGTCATGGCGATGGACAAAG...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTCCTTGGTTTTCTTCTTaGTACCCAGAACTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVPWFSS*YPELGC
Trigger: GCAACCCAGTTCTGGGTATCAAGAAGAAAACCAAGG...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACCTTGGTTTTCTTCTTaGTACCCAGAACTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAPWFSS*YPELGC
Trigger: GCAACCCAGTTCTGGGTATCAAGAAGAAAACCAAGG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTCTGAGCTTGTTGAAATaGCCCTGGCATCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSLSLLK*PWHPLA
Trigger: AGCCAGAGGATGCCAGGGTCATTTCAACAAGCTCAG...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGATCTCTTCCTCTATTaGCTCTTCACCACCGACACT +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSDLFLY*LFTTDT
Trigger: AGTGTCGGTGGTGAAGAGTCAATAGAGGAAGAGATC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCCAGAAAGGGTGACTaGTGGTTGTCACTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALSRKGD*WLSLKG
Trigger: TCCTTTTAGTGACAACCATCAGTCACCCTTTCTGGA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTCCAGAAAGGGTGACTaGTGGTTGTCACTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYSRKGD*WLSLKG
Trigger: TCCTTTTAGTGACAACCATCAGTCACCCTTTCTGGA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACTATTTTCCTCTGCGTaGGTAAAGGCTGTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTELFSSA*VKAVSG
Trigger: TCCGGACACAGCCTTTACTCACGCAGAGGAAAATAG...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTAGCTGCCCACCCTCTTaGAAGTTGCCATGTAAAATA +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMASCPPS*KLPCKI
Trigger: TATTTTACATGGCAACTTTCAAGAGGGTGGGCAGCT...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGTTTGCTTCAGAATCGTaGCATATATCAGGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWFASES*HISGLS
Trigger: CGACAGCCCTGATATATGTCACGATTCTGAAGCAAA...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTTTGCTTCAGAATCGTaGCATATATCAGGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALFASES*HISGLS
Trigger: CGACAGCCCTGATATATGTCACGATTCTGAAGCAAA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGGATGTGTTGAGACCTaGGGCATCGCTGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLGCVET*GIAETV
Trigger: CACAGTTTCAGCGATGCCTCAGGTCTCAACACATCC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTTCCCAGTCAACGTTTaGTGGAGACAAAATGTTGGA +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSFPVNV*WRQNVG
Trigger: TCCAACATTTTGTCTCCATCAAACGTTGACTGGGAA...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCTTCTGTGATTGGCTaGCTGGACCAGAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSSSVIG*LDQRLP
Trigger: AGGAAGCCTCTGGTCCAGTCAGCCAATCACAGAAGA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGGGATCATGTTTTTCTaGACAGGCTGTGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVGIMFF*TGCGES
Trigger: GCTTTCACCACAGCCTGTTCAGAAAAACATGATCCC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTTTCCTGGGGAGAGTTaGGACCTGTGTACTTTAAAC +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYFPGES*DLCTLN
Trigger: GTTTAAAGTACACAGGTCTCAACTCTCCCCAGGAAA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACGGTAACCTCTGGAGCTaGGTTTATGGCCTGAAACTC +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHGNLWS*VYGLKL
Trigger: GAGTTTCAGGCCATAAACTCAGCTCCAGAGGTTACC...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTCTGAATGCTACCAAATaGTTTTTGAGTAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSLNATK*FLSRPP
Trigger: AGGTGGCCTACTCAAAAATCATTTGGTAGCATTCAG...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAACTTCATTTTGGCAATTaGAACCTAAGCAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTELHFGN*NLSSDF
Trigger: AAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAG...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTGAGAAACAATGCTTTTaGCCCAATGACCCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMAEKQCF*PNDPLV
Trigger: AACCAAGGGGTCATTGGGGCAAAAGCATTGTTTCTC...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAGCTTTGAGAAACAATaGTTTTGCCCCAATGACCCC +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANSFEKQ*FCPNDP
Trigger: GGGGTCATTGGGGCAAAAGCATTGTTTCTCAAAGCT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTCCACACTGAGCTACTaGCCTCAAACAAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANSTLSY*PQTNFL
Trigger: GAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGA...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATCGCCAGCACACTGCTaGCAACAAGTGTTATCGATA +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPASPAHC*QQVLSI
Trigger: TATCGATAACACTTGTTGGCAGCAGTGTGCTGGCGA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAGGGGAAGAAGTCATCTaGTGGGGAGTAGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAGEEVI*WGVVCR
Trigger: TCTGCAGACTACTCCCCAGCAGATGACTTCTTCCCC...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAACATGTTGGTTCCCATaGCATCAAGTCCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHITCWFP*HQVLQA
Trigger: GGCCTGAAGGACTTGATGGCATGGGAACCAACATGT...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACACATGTTGGTTCCCATaGCATCAAGTCCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHTCWFP*HQVLQA
Trigger: GGCCTGAAGGACTTGATGGCATGGGAACCAACATGT...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTACCACAAGGCTATCTTTaGCAGCCCCTGACAAAAGTG +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLPQGYL*QPLTKV
Trigger: CACTTTTGTCAGGGGCTGGCAAAGATAGCCTTGTGG...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGGAGAGCGACCAGAATaGCACAAAGAAGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVGERPE*HKEAKS
Trigger: AGACTTTGCTTCTTTGTGGCATTCTGGTCGCTCTCC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGATCTTCTTTACCAAATaGACTCCAGGCTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWIFFTK*TPGWEW
Trigger: CCATTCCCAGCCTGGAGTGCATTTGGTAAAGAAGAT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTTCTTACCATCTGTGTaGTCTGTCTTGAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGFLPSV*SVLSSF
Trigger: AAATGAACTCAAGACAGAGCACACAGATGGTAAGAA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTGCACTGTCCTTGGTATaGTCATCAGAGGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLALSLV*SSEAGS
Trigger: GCTCCCTGCCTCTGATGAGCATACCAAGGACAGTGC...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAGATGCTGCATCACTTTaGAGGGTTTCCCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEDAASL*RVSLSV
Trigger: CACAGAGAGGGAAACCCTGCAAAGTGATGCAGCATC...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTGATGCTGCATCACTTTaGAGGGTTTCCCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVDAASL*RVSLSV
Trigger: CACAGAGAGGGAAACCCTGCAAAGTGATGCAGCATC...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCTAGTCGCCAAGGATaGTGCATCACTTTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLPSRQG*CITLQG
Trigger: ACCCTGCAAAGTGATGCAGCATCCTTGGCGACTAGG...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAACATGTGCTGCTGACATaGACATCACTGTCTATAGGG +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEHVLLT*TSLSIG
Trigger: CCCTATAGACAGTGATGTGCATGTCAGCAGCACATG...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTCTGTTCACTCCAGTTaGCTTGGTTTTCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSASVHSS*LGFLLD
Trigger: ATCAAGAAGAAAACCAAGGCAACTGGAGTGAACAGA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGATCCAGGGATCAGGGCTaGTTTGTTGATTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRSRDQG*FVDCHR
Trigger: TCTGTGACAATCAACAAAGCAGCCCTGATCCCTGGA...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATCCACTGCTGTAATCTaGATTTCAGTCTCCGTTAAT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSSTAVI*ISVSVN
Trigger: ATTAACGGAGACTGAAATGCAGATTACAGCAGTGGA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAGGGAGATATTTGCCATaGAACATCTCCTGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAGRYLP*NISCCP
Trigger: GGGACAACAGGAGATGTTGCATGGCAAATATCTCCC...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCATGGTTCCAAAATTGGTaGCATATCTGGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPWFQNW*HIWAGS
Trigger: GGAGCCAGCCCAGATATGGCACCAATTTTGGAACCA...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATATCAAACAAAGCTCTTaGACCAGGCTGACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANIKQSS*TRLTFR
Trigger: CCTGAAAGTCAGCCTGGTGCAAGAGCTTTGTTTGAT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTACGGTGCCAGCGACTaGTTCAGAGAATCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSYGASD*FRESSS
Trigger: GGAGGAAGATTCTCTGAAGCAGTCGCTGGCACCGTA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGTACGGTGCCAGCGACTaGTTCAGAGAATCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEYGASD*FRESSS
Trigger: GGAGGAAGATTCTCTGAAGCAGTCGCTGGCACCGTA...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTATCTCTGCTGCTCTaGATCCCAGAGATTCATCCT +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRLSLLL*IPEIHP
Trigger: AGGATGAATCTCTGGGATGCAGAGCAGCAGAGATAG...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTGGGTCTTCACGAATATaGAGCACAGCCAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSGSSRI*STASWD
Trigger: ATCCCAGCTGGCTGTGCTGCATATTCGTGAAGACCC...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATCAAAATGTTGGAGCCTaGTCCTACCGGCAAATAAAC +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANQNVGA*SYRQIN
Trigger: GTTTATTTGCCGGTAGGAGCAGGCTCCAACATTTTG...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAATTCTGATATTTCCTTaGTGGCACCATTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPILIFP*WHHLVV
Trigger: GACCACCAAATGGTGCCAGCAAGGAAATATCAGAAT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCTCCTTCTTGGGGTTaGACCATTCAAGTACACAAT +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWPPSWG*TIQVHN
Trigger: ATTGTGTACTTGAATGGTGCAACCCCAAGAAGGAGG...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATCCTCCTTCTTGGGGTTaGACCATTCAAGTACACAAT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYPPSWG*TIQVHN
Trigger: ATTGTGTACTTGAATGGTGCAACCCCAAGAAGGAGG...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGCTGTGGGATCTTCATaGCCAGTGTACTCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGAVGSS*PVYSKE
Trigger: TTCTTTTGAGTACACTGGCCATGAAGATCCCACAGC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376717.6
ENST00000428286.5
CDS-3UTR CCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTGGCCAGAATCTTTGTTaGCTGTGGGATCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVGQNLC*LWDLHG
Trigger: GCCATGAAGATCCCACAGCCAACAAAGATTCTGGCC...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000428286.5
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAACCATGAGACTAGGGTaGAACCGCTCTCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQTMRLG*NRSHPF
Trigger: GAAGGGGTGAGAGCGGTTCCACCCTAGTCTCATGGT...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAGGACTCCAAATATCCTaGACAGCTCTCCCCAATGAA +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKGLQIS*TALPNE
Trigger: TTCATTGGGGAGAGCTGTCCAGGATATTTGGAGTCC...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTTGGGCTTTCAAAAGTaGAGGTGGGCTGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLLGFQK*RWAVGG
Trigger: CCCTCCCACAGCCCACCTCCACTTTTGAAAGCCCAA...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTGGGAGAGGTGTAATTTaGGCTTTCAAAAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTGRGVI*AFKSGG
Trigger: ACCTCCACTTTTGAAAGCCCAAATTACACCTCTCCC...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGTCAACACTGTGTTCTaGGAGAGGTGTAATTTGGGC +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVVNTVF*ERCNLG
Trigger: GCCCAAATTACACCTCTCCCAGAACACAGTGTTGAC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTAGCTCAGGAGCCTCTTaGAGAATCTCCTTTAGCACG +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVSSGAS*RISFST
Trigger: CGTGCTAAAGGAGATTCTCCAAGAGGCTCCTGAGCT...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGAGGATGTCCGGCTATTaGAGACCATCTCTGGACACC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKERMSGY*RPSLDT
Trigger: GGTGTCCAGAGATGGTCTCCAATAGCCGGACATCCT...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTAGGATGTCCGGCTATTaGAGACCATCTCTGGACACC +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSRMSGY*RPSLDT
Trigger: GGTGTCCAGAGATGGTCTCCAATAGCCGGACATCCT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACACAGAGCTGGGTTGTaGCTCTATGTCAGAACCATA +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRHRAGL*LYVRTI
Trigger: TATGGTTCTGACATAGAGCCACAACCCAGCTCTGTG...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAAGCCAGTCCGCTGTCTaGGCTAACAAGGTCTACATT +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHISQSAV*ANKVYI
Trigger: AATGTAGACCTTGTTAGCCCAGACAGCGGACTGGCT...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATACTGACAGGTCACTGTTaGGGAAGAAGTCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHILTGHC*GRSHLL
Trigger: CAGCAGATGACTTCTTCCCCAACAGTGACCTGTCAG...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTCAGATTCCTGTTCACTaGAACTCCACGCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVQIPVH*NSTHLQ
Trigger: TTGCAGATGCGTGGAGTTCCAGTGAACAGGAATCTG...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAGGCTCTCCTATCAATaGAGCTTGGCTTATGCTCTT +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANRLSYQ*SLAYAL
Trigger: AAGAGCATAAGCCAAGCTCCATTGATAGGAGAGCCT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAAAGGTGACTTCTCCATaGGCAGGTTCTGGAACGGCA +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLKVTSP*AGSGTA
Trigger: TGCCGTTCCAGAACCTGCCCATGGAGAAGTCACCTT...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAAAGGTGACTTCTCCATaGGCAGGTTCTGGAACGGCA +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRKVTSP*AGSGTA
Trigger: TGCCGTTCCAGAACCTGCCCATGGAGAAGTCACCTT...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCCTGATCTTCTTTTGGTaGCTTAGAATTAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFLIFFW*LRISPC
Trigger: ACATGGACTAATTCTAAGCCACCAAAAGAAGATCAG...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCTGAGGTGGAATAATTaGTATCTAAGGGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGLRWNN*YLRGKA
Trigger: TGCCTTCCCCCTTAGATACCAATTATTCCACCTCAG...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTGTAAGAGTCTGAGGTaGAATAATTGGTATCTAAGG +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFCKSLR*NNWYLR
Trigger: CCTTAGATACCAATTATTCCACCTCAGACTCTTACA...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGACAGTTGCATCATGCTaGGGTCGTCGTAACTGGACT +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLTVASC*GRRNWT
Trigger: AGTCCAGTTACGACGACCCCAGCATGATGCAACTGT...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAACAGTTGCATCATGCTaGGGTCGTCGTAACTGGACT +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLTVASC*GRRNWT
Trigger: AGTCCAGTTACGACGACCCCAGCATGATGCAACTGT...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATCTGAGATCGTTGCAGTaGACTGAGTATCCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANLRSLQ*TEYPPK
Trigger: TTTTGGAGGATACTCAGTCCACTGCAACGATCTCAG...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCATGTGTGATGTTCACTaGGAGCACTGTCCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGMCDVH*EHCPWY
Trigger: ATACCAAGGACAGTGCTCCCAGTGAACATCACACAT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGTGTGGAAAATACCCTaGATTCTCAAGCCTAGTCGC +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVVWKIP*ILKPSR
Trigger: GCGACTAGGCTTGAGAATCCAGGGTATTTTCCACAC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTCCATGGATCTGGGTGTaGAAAATACCCTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVPWIWV*KIPWIL
Trigger: GAGAATCCAGGGTATTTTCCACACCCAGATCCATGG...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCACCATGGATCTGGGTGTaGAAAATACCCTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSPWIWV*KIPWIL
Trigger: GAGAATCCAGGGTATTTTCCACACCCAGATCCATGG...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTCCATGGATCTGGGTGTaGAAAATACCCTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCPWIWV*KIPWIL
Trigger: GAGAATCCAGGGTATTTTCCACACCCAGATCCATGG...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAACCATGGATCTGGGTGTaGAAAATACCCTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKPWIWV*KIPWIL
Trigger: GAGAATCCAGGGTATTTTCCACACCCAGATCCATGG...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGCCATGACCTTTCCATaGATCTGGGTGTGGAAAATA +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWAMTFP*IWVWKI
Trigger: TATTTTCCACACCCAGATCCATGGAAAGGTCATGGC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGAGAGAAGACAGTTCCTaGTCACTCTGCCCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWREDSS*SLCPFS
Trigger: TGAAAAAGGGCAGAGTGACCAGGAACTGTCTTCTCT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGTTCATGGGTATCTTTTaGCTGCAGGTTATCTGCGGA +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWFMGIF*LQVICG
Trigger: TCCGCAGATAACCTGCAGCCAAAAGATACCCATGAA...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTAGACGAACCGGCTCCTaGAAGGCTATTTTCAGACCC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLRRTGS*KAIFRP
Trigger: GGGTCTGAAAATAGCCTTCCAGGAGCCGGTTCGTCT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAATGGCAGTTGGCCACCTaGATCTCTTCCTCTATTGAC +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEWQLAT*ISSSID
Trigger: GTCAATAGAGGAAGAGATCCAGGTGGCCAACTGCCA...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCAGCAACGTGGCAGTTaGCCACCTGGATCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLQQRGS*PPGSLP
Trigger: AGGAAGAGATCCAGGTGGCCAACTGCCACGTTGCTG...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAACAGCAACGTGGCAGTTaGCCACCTGGATCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQQQRGS*PPGSLP
Trigger: AGGAAGAGATCCAGGTGGCCAACTGCCACGTTGCTG...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGATGAATCCCAAGCTCTaGATTCATCCTCAGCAACGT +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWMNPKL*IHPQQR
Trigger: ACGTTGCTGAGGATGAATCCAGAGCTTGGGATTCAT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTAATATCACCCTGAACTaGTACTCCCCAGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLNITLN*YSPGTG
Trigger: GCCAGTCCCTGGGGAGTACCAGTTCAGGGTGATATT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAGTCAGCATCTGGGTCTaGCTGCCTTGGTTGAATGTT +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIVSIWV*LPWLNV
Trigger: AACATTCAACCAAGGCAGCCAGACCCAGATGCTGAC...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACGTCAGCATCTGGGTCTaGCTGCCTTGGTTGAATGTT +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHVSIWV*LPWLNV
Trigger: AACATTCAACCAAGGCAGCCAGACCCAGATGCTGAC...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAAATCGAGTTCTGCATTaGATGGGACAAACTCCCGTC +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPANRVLH*MGQTPV
Trigger: GACGGGAGTTTGTCCCATCCAATGCAGAACTCGATT...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGTGCCATATCTGGGCTaGCTCCTTTTTCTGATACTT +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWVPYLG*LLFLIL
Trigger: AAGTATCAGAAAAAGGAGCCAGCCCAGATATGGCAC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTAACTGGTTCCAAAATTaGTGCCATATCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCNWFQN*CHIWAG
Trigger: GCCAGCCCAGATATGGCACCAATTTTGGAACCAGTT...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGTCACCTTCTGGAGTTaGCTCTTGGTGAGTTACAAA +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWVTFWS*LLVSYK
Trigger: TTTGTAACTCACCAAGAGCCAACTCCAGAAGGTGAC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAACTGGCGTTTCCGGATaGCCTTCGGATAATGTCAGT +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQITGVSG*PSDNVS
Trigger: ACTGACATTATCCGAAGGCCATCCGGAAACGCCAGT...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTTTTTGGTCTCAGCCTaGTTTCCCTCACTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALFLVSA*FPSLLR
Trigger: TCGAAGAAGTGAGGGAAACCAGGCTGAGACCAAAAA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGTTTTTGGTCTCAGCCTaGTTTCCCTCACTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWFLVSA*FPSLLR
Trigger: TCGAAGAAGTGAGGGAAACCAGGCTGAGACCAAAAA...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTTTTTGGTCTCAGCCTaGTTTCCCTCACTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYFLVSA*FPSLLR
Trigger: TCGAAGAAGTGAGGGAAACCAGGCTGAGACCAAAAA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTCTTGCTGGCACCATTTaGTGGTCCTATGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSLAGTI*WSYVST
Trigger: GGTGGAGACATAGGACCACCAAATGGTGCCAGCAAG...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGCTGATATTTCCTTGCTaGCACCATTTGGTGGTCCTA +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALLIFPC*HHLVVL
Trigger: TAGGACCACCAAATGGTGCCAGCAAGGAAATATCAG...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATCCCATTCATTGTCATaGGTGACAGCCTGCAACGTA +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSSHSLS*VTACNV
Trigger: TACGTTGCAGGCTGTCACCCATGACAATGAATGGGA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGATCCCATTCATTGTCATaGGTGACAGCCTGCAACGTA +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRSHSLS*VTACNV
Trigger: TACGTTGCAGGCTGTCACCCATGACAATGAATGGGA...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTTGGCTGTGGGATCATaGCCAGTGTACTCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALLAVGS*PVYSKE
Trigger: TTCTTTTGAGTACACTGGCCATGATCCCACAGCCAA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCAATCTTTGTTGGCTGTaGGATCATGGCCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGNLCWL*DHGQCT
Trigger: AGTACACTGGCCATGATCCCACAGCCAACAAAGATT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATAATCTTTGTTGGCTGTaGGATCATGGCCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYNLCWL*DHGQCT
Trigger: AGTACACTGGCCATGATCCCACAGCCAACAAAGATT...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGGCCAGAATCTTTGTTaGCTGTGGGATCATGGCCAG +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLGQNLC*LWDHGQ
Trigger: CTGGCCATGATCCCACAGCCAACAAAGATTCTGGCC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATGGCATCCTCCTTCTTaGGGTTGCACCATTCAAGTA +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSWHPPS*GCTIQV
Trigger: TACTTGAATGGTGCAACCCCAAGAAGGAGGATGCCA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACGTGGATGCAATCCATTaGGATCAGCCCACTGAGTTC +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHVDAIH*DQPTEF
Trigger: GAACTCAGTGGGCTGATCCCAATGGATTGCATCCAC...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTATGCTCTCTGGAATGTaGATGCAATCCATTGGGATC +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMAMLSGM*MQSIGI
Trigger: GATCCCAATGGATTGCATCCACATTCCAGAGAGCAT...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATCCTCTTCTTCCAGCATaGCCAACTAAGGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANPLLPA*PTKAFL
Trigger: AAGAAAAGCCTTAGTTGGCCATGCTGGAAGAAGAGG...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTCCTCTTCTTCCAGCATaGCCAACTAAGGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMAPLLPA*PTKAFL
Trigger: AAGAAAAGCCTTAGTTGGCCATGCTGGAAGAAGAGG...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTGTTTTACACCTTGTGTaGTTTGTGGCTGTCCTAGTC +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTVLHLV*FVAVLV
Trigger: GACTAGGACAGCCACAAACCACACAAGGTGTAAAAC...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTAAAATAAAGTTGACGTaGATTAGAAAGCCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAKIKLT*IRKPGF
Trigger: GAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTT...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAAATTTCACAATGTGGTaGTCACCAACATTCATCAGG +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSNFTMW*SPTFIR
Trigger: CCTGATGAATGTTGGTGACCACCACATTGTGAAATT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCACTTGATGATGCTCTCTaGAATGTGGATGCAATCCAT +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPLDDAL*NVDAIH
Trigger: ATGGATTGCATCCACATTCCAGAGAGCATCATCAAG...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424866.1
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTCAGCATCTCTCTTCTaGGCAGTTAACTGGAAATAC +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYSASLF*AVNWKY
Trigger: GTATTTCCAGTTAACTGCTCAGAAGAGAGATGCTGA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376717.6
CDS-3UTR TCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTTTCTGGAATAGACTCTaGCTCTTGGCCAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTFWNRL*LLARIF
Trigger: AAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAA...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAGCTCTTGTTCTCCAATaGCCACTGTCCTCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQALVLQ*PLSSKA
Trigger: GGCTTTGGAGGACAGTGGTCATTGGAGAACAAGAGC...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTATCCTCCGTGAGAAATaGCTCTCCTGTAGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLILREK*LSCRAR
Trigger: TCGAGCCCTACAGGAGAGTCATTTCTCACGGAGGAT...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS-3UTR TCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAAGGCGGCAAACACAATaGTGGCATTTAGACCGTCCC +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQRRQTQ*WHLDRP
Trigger: GGGACGGTCTAAATGCCATCATTGTGTTTGCCGCCT...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAAACAAGATACTCGCTTaGAAGGATCAAGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPNKILA*KDQEEK
Trigger: TTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAACAAGCCAGATGTTATaGAGGAGGAGATCCAACAGA +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPATSQML*RRRSNR
Trigger: TCTGTTGGATCTCCTCCTTCATAACATCTGGCTTGT...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTACAAGCCAGATGTTATaGAGGAGGAGATCCAACAGA +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVTSQML*RRRSNR
Trigger: TCTGTTGGATCTCCTCCTTCATAACATCTGGCTTGT...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAGATTTTCTTCCACACTaGGCTACTGCCCTCAAACAA +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEDFLPH*ATALKQ
Trigger: TTGTTTGAGGGCAGTAGCTCAGTGTGGAAGAAAATC...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTGATTTTCTTCCACACTaGGCTACTGCCCTCAAACAA +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCDFLPH*ATALKQ
Trigger: TTGTTTGAGGGCAGTAGCTCAGTGTGGAAGAAAATC...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGAAGGGAACAAACTACTaGGGCATTGTGATAAGACGA +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALKGTNY*GIVIRR
Trigger: TCGTCTTATCACAATGCCTCAGTAGTTTGTTCCCTT...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGAACCCCTGGTGGACTaGCCTTGTCTAGAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLEPLVD*PCLESK
Trigger: CTTACTTTCTAGACAAGGTCAGTCCACCAGGGGTTC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAAAAGAATGCTACCTCTaGGGCGATGAGCCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAKECYL*GDEPVA
Trigger: AGCAACTGGCTCATCGCCTCAGAGGTAGCATTCTTT...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAATCTAGGCAAGGGTTCTaGCACTCTTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQSRQGF*HSSSSQ
Trigger: CTGTGAGCTGGAAGAGTGTCAGAACCCTTGCCTAGA...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTGATCACAAGTCACTaGAGGGTCCTCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVLITSH*RVLLLV
Trigger: TACCAACAAGAGGACCCTTCAGTGACTTGTGATCAG...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGTGCTGGGTCAAAATTaGAGAGGTCGAAGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEVLGQN*RGRSAH
Trigger: GTGAGCACTTCGACCTCTTCAATTTTGACCCAGCAC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAACTTATGCTCTTTCCATaGTTCAGGGCTCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKLMLFP*FRALEN
Trigger: GTTTTCCAGAGCCCTGAATCATGGAAAGAGCATAAG...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCATCCACTAAACCATTCTaGTCTTCTTTTGGTGGCTTA +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPSTKPF*SSFGGL
Trigger: TAAGCCACCAAAAGAAGATCAGAATGGTTTAGTGGA...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAATCCCAGGACCTGAACTaGTTCGATTTCGAGATGACT +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTESQDLN*FDFEMT
Trigger: AGTCATCTCGAAATCGAATCAGTTCAGGTCCTGGGA...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAGAACTGTTATCTGTATaGGGTGAAGCCCACATGTCT +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAELLSV*GEAHMS
Trigger: AGACATGTGGGCTTCACCTCATACAGATAACAGTTC...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGAACTGTTATCTGTATaGGGTGAAGCCCACATGTCT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVELLSV*GEAHMS
Trigger: AGACATGTGGGCTTCACCTCATACAGATAACAGTTC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTGAACTGTTATCTGTATaGGGTGAAGCCCACATGTCT +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCELLSV*GEAHMS
Trigger: AGACATGTGGGCTTCACCTCATACAGATAACAGTTC...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTATCATTGTCCATATCTaGGATCGTTGCAGTGGACTG +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVIIVHI*DRCSGL
Trigger: CAGTCCACTGCAACGATCTCAGATATGGACAATGAT...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAATGTATCCTTCTGTTTaGCCATCACTGGGGATTGCC +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEMYPSV*PSLGIA
Trigger: GGCAATCCCCAGTGATGGTCAAACAGAAGGATACAT...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTTTCTCATTCAATGTGTaGTGTTCACTGGGAGCACTG +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCFSFNV*CSLGAL
Trigger: CAGTGCTCCCAGTGAACATCACACATTGAATGAGAA...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAAGATATAAGTGCCTCTaGTTCACTGGTTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLRYKCL*FTGSRG
Trigger: GCCTCTGGAACCAGTGAATCAGAGGCACTTATATCT...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTCCTGCTTGTCAAGATaGGATATAAGTGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYSCLSR*DISASD
Trigger: ATCAGAGGCACTTATATCTCATCTTGACAAGCAGGA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTCCTGCTTGTCAAGATaGGATATAAGTGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANSCLSR*DISASD
Trigger: ATCAGAGGCACTTATATCTCATCTTGACAAGCAGGA...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTCTGGTTCCTCGGTTTaGGGACTGAAAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLSGSSV*GLKVTA
Trigger: TGCTGTCACTTTCAGTCCTCAAACCGAGGAACCAGA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGAAATTCATCCCATCTaGAGTCTCAGTAGTTTCACC +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWEIHPI*SLSSFT
Trigger: GGTGAAACTACTGAGACTTCAGATGGGATGAATTTC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTACAGAACATGTGCTGCTaGCATGCACATCACTGTCTA +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLQNMCC*HAHHCL
Trigger: TAGACAGTGATGTGCATGTCAGCAGCACATGTTCTG...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGAGTTCAGATTCTTGGTaGTTCTGTTCACTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWSSDSW*FCSLQL
Trigger: CAACTGGAGTGAACAGAATCACCAAGAATCTGAACT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAATTAGATTGCTTTCCTaGTGTGTCCCTGAATGTTCA +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPIRLLS*CVPECS
Trigger: TGAACATTCAGGGACACATCAGGAAAGCAATCTAAT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAACTCAGTGCTATCAGCTaGGAAGCCCAGCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQLSAIS*EAQHFQ
Trigger: CTGGAAATGCTGGGCTTCTCAGCTGATAGCACTGAG...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTGGCATTTTGGTGTACTaGAGAATTTATCTCCAACAC +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSGILVY*RIYLQH
Trigger: GTGTTGGAGATAAATTCTTCAGTACACCAAAATGCC...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGTCTGGCTGCCTTGGTTaGATGTTCCAGAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKESGCLG*MFQSCS
Trigger: TGAGCAACTCTGGAACATTCAACCAAGGCAGCCAGA...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTTTGCTTCAGAATCGTaGCATATATCAGGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVFASES*HISGLS
Trigger: CGACAGCCCTGATATATGTCACGATTCTGAAGCAAA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTTCCCAGTCAACGTTTaGTGGAGACAAAATGTTGGA +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYFPVNV*WRQNVG
Trigger: TCCAACATTTTGTCTCCATCAAACGTTGACTGGGAA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTCCATGTGTAGTGCATaGCGATCTTCATTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGSMCSA*RSSFFS
Trigger: AGAGAAGAATGAAGATCGTCATGCACTACACATGGA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCATTTAAGGAGGCTGGCTaGCATGTGTCTGGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAFKEAG*HVSGKL
Trigger: AAGCTTCCCAGACACATGTCAGCCAGCCTCCTTAAA...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAGGGATCATGTTTTTCTaGACAGGCTGTGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIGIMFF*TGCGES
Trigger: GCTTTCACCACAGCCTGTTCAGAAAAACATGATCCC...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAAGTTTTAGCTGCCTCTaGTGCTTCCCTCAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHISFSCL*CFPQFF
Trigger: GAAGAACTGAGGGAAGCATCAGAGGCAGCTAAAACT...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS-3UTR TCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGATTTCCTGGGGAGAGTTaGGACCTGTGTACTTTAAAC +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRFPGES*DLCTLN
Trigger: GTTTAAAGTACACAGGTCTCAACTCTCCCCAGGAAA...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGAGCCCGGCTTCCCTTTaGGAAGTTAAAGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLSPASL*EVKGDS
Trigger: AGAATCTCCTTTAACTTCTCAAAGGGAAGCCGGGCT...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAGCTGAGTTTATGGCCTaGAACTCAGAGAGCTACCAA +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIAEFMA*NSESYQ
Trigger: TTGGTAGCTCTCTGAGTTTCAGGCCATAAACTCAGC...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTGTACTCAAAAGAATCTaGTTCATCGGGGGTATCAAG +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTVLKRI*FIGGIK
Trigger: CTTGATACCCCCGATGAAGCAGATTCTTTTGAGTAC...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAATTCATGTCAATGCGCTaGTCTTGTTCTCCAATGACC +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKFMSMR*SCSPMT
Trigger: GGTCATTGGAGAACAAGAGCAGCGCATTGACATGAA...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCTTCATTTTGGCAATTaGAACCTAAGCAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGLHFGN*NLSSDF
Trigger: AAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTAAACTCAATCACCTGTaGAAAGATGTCGACTTTAAA +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLKLNHL*KDVDFK
Trigger: TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTT...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATACTATGCCCTCAGGTTTaGACCACTACACTGAACACT +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHILCPQV*TTTLNT
Trigger: AGTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAG...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTCTCTGTCTACCTATCTaGTTAGGGATTATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLLCLPI*LGIIFL
Trigger: TAGAAAAATAATCCCTAAGCAGATAGGTAGACAGAG...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAGAGAAACAATGCTTTTaGCCCAATGACCCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKEKQCF*PNDPLV
Trigger: AACCAAGGGGTCATTGGGGCAAAAGCATTGTTTCTC...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTAGCTTTGAGAAACAATaGTTTTGCCCCAATGACCCC +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCSFEKQ*FCPNDP
Trigger: GGGGTCATTGGGGCAAAAGCATTGTTTCTCAAAGCT...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAATCCACACTGAGCTACTaGCCTCAAACAAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKSTLSY*PQTNFL
Trigger: GAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGA...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGATCCACACTGAGCTACTaGCCTCAAACAAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRSTLSY*PQTNFL
Trigger: GAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGA...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAACGTTGGCATCGCTCTaGTCAACCGGATTAATGACT +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQITLASL*STGLMT
Trigger: AGTCATTAATCCGGTTGAGCAGAGCGATGCCAACGT...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAACACAGCAAATCTGACTaGACAGCTCCATGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKHSKSD*TAPCFL
Trigger: CAGAAAACATGGAGCTGTGCAGTCAGATTTGCTGTG...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAATGCTGGGGAGTAGTCTaGAGAATGAGAAGATTGCTG +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTECWGVV*RMRRLL
Trigger: CAGCAATCTTCTCATTCTGCAGACTACTCCCCAGCA...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATGTGACCTGTGTCAGTTaGTTTTTGGGTCATATCTTC +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANVTCVS*FLGHIF
Trigger: GAAGATATGACCCAAAAAGCAACTGACACAGGTCAC...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTGTCTTGAATATCATTaGTACCCAGTTCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANCLEYH*YPVQAD
Trigger: GTCAGCCTGAACTGGGTAGCAATGATATTCAAGACA...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTGTCTTGAATATCATTaGTACCCAGTTCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYCLEYH*YPVQAD
Trigger: GTCAGCCTGAACTGGGTAGCAATGATATTCAAGACA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAGAATGGCGCCACAGCTaGTGGTTCACCATCATCTGT +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQEWRHS*WFTIIC
Trigger: ACAGATGATGGTGAACCAGCAGCTGTGGCGCCATTC...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTATCTTCTTTACCAAATaGACTCCAGGCTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCIFFTK*TPGWEW
Trigger: CCATTCCCAGCCTGGAGTGCATTTGGTAAAGAAGAT...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAATCTTCTTTACCAAATaGACTCCAGGCTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSIFFTK*TPGWEW
Trigger: CCATTCCCAGCCTGGAGTGCATTTGGTAAAGAAGAT...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAGTCATTGTTTTTCTTaGCCCAGATTTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANSHCFS*PRFLEL
Trigger: CAGCTCCAGAAATCTGGGGCAAGAAAAACAATGACT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGAGTCATTGTTTTTCTTaGCCCAGATTTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWSHCFS*PRFLEL
Trigger: CAGCTCCAGAAATCTGGGGCAAGAAAAACAATGACT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAACTGGGATTTCCAGGTaGAAAGATGTGATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTETGISR*KDVIPG
Trigger: TCCAGGGATCACATCTTTGCACCTGGAAATCCCAGT...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTAATGTCAGTCTCCTCTaGCGTGGAGTTACCATCTTT +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCNVSLL*RGVTIF
Trigger: AAAGATGGTAACTCCACGGCAGAGGAGACTGACATT...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGAGTTGGTGCTGCTGTaGAAAAGTGTGAGTTGTCGG +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLELVLL*KSVSCR
Trigger: CCGACAACTCACACTTTTGCACAGCAGCACCAACTC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCACCAATCTACCTGATTTaGTTCCTGATACTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSPIYLI*FLILQA
Trigger: GGCTTGGAGTATCAGGAAGCAAATCAGGTAGATTGG...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTCTGTTTGCAATTAGCTaGCCACTTTTCTCATTCAAT +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSALFAIS*PLFSFN
Trigger: ATTGAATGAGAAAAGTGGGCAGCTAATTGCAAACAG...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGGAGGCAATTCCCTTTaGTCTGAATCTGTGATATGT +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWGGNSL*SESVIC
Trigger: ACATATCACAGATTCAGAGCAAAGGGAATTGCCTCC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTAGTCGCCAAGGATGCTaGATCACTTTGCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSSRQGC*ITLQGF
Trigger: GAAACCCTGCAAAGTGATGCAGCATCCTTGGCGACT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTGCGGACATCCCTGTTTaGACATCACGGGAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLADIPV*TSRESR
Trigger: TCTAGACTCCCGTGATGTGCAAACAGGGATGTCCGC...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCATGGGTATCTTTTGGCTaGAGGTTATCTGCGGACATC +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPWVSFG*RLSADI
Trigger: GATGTCCGCAGATAACCTGCAGCCAAAAGATACCCA...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCACATGTGCTGCTGACATaGACATCACTGTCTATAGGG +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPHVLLT*TSLSIG
Trigger: CCCTATAGACAGTGATGTGCATGTCAGCAGCACATG...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTACATGTGCTGCTGACATaGACATCACTGTCTATAGGG +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLHVLLT*TSLSIG
Trigger: CCCTATAGACAGTGATGTGCATGTCAGCAGCACATG...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAACGGAAGCCTGAGAATTaGTGTCATGTTCGCAGTGCG +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQRKPEN*CHVRSA
Trigger: CGCACTGCGAACATGACAGCAATTCTCAGGCTTCCG...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAATGCAAGCACTGAGGTaGTTCTCAGTCTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEMQALR*FSVSCF
Trigger: AAAGCAAGAGACTGAGAAGCACCTCAGTGCTTGCAT...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAATGGAGGCAGCACAGTTaGGTTTTCAGAATCGAGTTC +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEWRQHS*VFRIEF
Trigger: GAACTCGATTCTGAAAACGCAACTGTGCTGCCTCCA...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTATACAAAAATGCTAGTTaGCACATTTTCAATCCTTGG +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLYKNAS*HIFNPW
Trigger: CCAAGGATTGAAAATGTGGCAACTAGCATTTTTGTA...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTACTATCTCTGCTGCTCTaGATCCCAGAGATTCATCCT +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLLSLLL*IPEIHP
Trigger: AGGATGAATCTCTGGGATGCAGAGCAGCAGAGATAG...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAATTTCTTCCAGAATCTaGAGCTGGGGACCCTCACCC +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQISSRI*SWGPSP
Trigger: GGGTGAGGGTCCCCAGCTGCAGATTCTGGAAGAAAT...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCATAGATCCTTCACTTTaGTCCAGAGAAAGATTGATA +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFIDPSL*SRERLI
Trigger: TATCAATCTTTCTCTGGACCAAAGTGAAGGATCTAT...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTATAGATCCTTCACTTTaGTCCAGAGAAAGATTGATA +
Preference number: 4 (lower is better)
Translates to: APGSAKWKKVTSALSLSGIDPSL*SRERLI
Trigger: TATCAATCTTTCTCTGGACCAAAGTGAAGGATCTAT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCGATGTCAATTTCATCTaGACTGTCCAAGTTATCATC +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALDVNFI*TVQVII
Trigger: GATGATAACTTGGACAGTCCAGATGAAATTGACATC...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGATGTCAATTTCATCTaGACTGTCCAAGTTATCATC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSDVNFI*TVQVII
Trigger: GATGATAACTTGGACAGTCCAGATGAAATTGACATC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAAATCTTTGTTGGCTGTaGGATCTTCATGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSNLCWL*DLHGQC
Trigger: ACACTGGCCATGAAGATCCCACAGCCAACAAAGATT...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376717.6
ENST00000428286.5
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATATAGACTCTGACTCTTaGCCAGAATCTTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANIDSDS*PESLLA
Trigger: AGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTAT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATATAGACTCTGACTCTTaGCCAGAATCTTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYIDSDS*PESLLA
Trigger: AGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTAT...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTGGACTCCAAATATCCTaGACAGCTCTCCCCAATGAA +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVGLQIS*TALPNE
Trigger: TTCATTGGGGAGAGCTGTCCAGGATATTTGGAGTCC...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAGGGAGAGGTGTAATTTaGGCTTTCAAAAGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEGRGVI*AFKSGG
Trigger: ACCTCCACTTTTGAAAGCCCAAATTACACCTCTCCC...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAAATTCTTCCATGTCGTaGCTAGGGGTTTGGAACCCG +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSANSSMS*LGVWNP
Trigger: CGGGTTCCAAACCCCTAGCCACGACATGGAAGAATT...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTAGCTCAGGAGCCTCTTaGAGAATCTCCTTTAGCACG +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSSSGAS*RISFST
Trigger: CGTGCTAAAGGAGATTCTCCAAGAGGCTCCTGAGCT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTGATGATGTCCTCTCTTaGAGGCAAGTTAGGAAATTT +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSDDVLS*RQVRKF
Trigger: AAATTTCCTAACTTGCCTCCAAGAGAGGACATCATC...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAATTGGAGACCATCTCTaGACACCTCCTGTTGATGAC +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEIGDHL*TPPVDD
Trigger: GTCATCAACAGGAGGTGTCCAGAGATGGTCTCCAAT...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAAGAATCATTGAGATCTaGAGGGTTCTCTATGAAATT +
Preference number: 4 (lower is better)
Translates to: AITRALYEQLYALRFAPLRIIEI*RVLYEI
Trigger: AATTTCATAGAGAACCCTCCAGATCTCAATGATTCT...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAAGCCAGTCCGCTGTCTaGGCTAACAAGGTCTACATT +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLSQSAV*ANKVYI
Trigger: AATGTAGACCTTGTTAGCCCAGACAGCGGACTGGCT...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTAGCCAGTCCGCTGTCTaGGCTAACAAGGTCTACATT +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLSQSAV*ANKVYI
Trigger: AATGTAGACCTTGTTAGCCCAGACAGCGGACTGGCT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGACTGACAGGTCACTGTTaGGGAAGAAGTCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRLTGHC*GRSHLL
Trigger: CAGCAGATGACTTCTTCCCCAACAGTGACCTGTCAG...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTCTACTAAACTATTCATaGGTGTTGGTGGGATCCTCT +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTLLNYS*VLVGSS
Trigger: AGAGGATCCCACCAACACCCATGAATAGTTTAGTAG...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGAAGTCTTCTATCAGGTaGTTTGTTCCTTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALKSSIR*FVPWGD
Trigger: ATCTCCCCAAGGAACAAACCACCTGATAGAAGACTT...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATAAGTCTTCTATCAGGTaGTTTGTTCCTTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYKSSIR*FVPWGD
Trigger: ATCTCCCCAAGGAACAAACCACCTGATAGAAGACTT...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCAAGTCTTCTATCAGGTaGTTTGTTCCTTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGKSSIR*FVPWGD
Trigger: ATCTCCCCAAGGAACAAACCACCTGATAGAAGACTT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTGTCTTGCTGCTTGTTaGGTGCAAATTCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGCLAAC*VQIPGI
Trigger: AATACCTGGAATTTGCACCCAACAAGCAGCAAGACA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGATCCAGATCAGAACTaGGATTTCCAGGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSDPDQN*DFQVQR
Trigger: TCTTTGCACCTGGAAATCCCAGTTCTGATCTGGATC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAACTGAGGTGGAATAATTaGTATCTAAGGGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSELRWNN*YLRGKA
Trigger: TGCCTTCCCCCTTAGATACCAATTATTCCACCTCAG...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCAGTCTCCTCTGCCGTaGAGTTACCATCTTTTGACT +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVQSPLP*SYHLLT
Trigger: AGTCAAAAGATGGTAACTCCACGGCAGAGGAGACTG...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACGACGTCATCCTCCATaGAGATATTCTTACCATCTG +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPARRHPP*RYSYHL
Trigger: CAGATGGTAAGAATATCTCCATGGAGGATGACGTCG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTATGTGTGATGTTCACTaGGAGCACTGTCCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVMCDVH*EHCPWY
Trigger: ATACCAAGGACAGTGCTCCCAGTGAACATCACACAT...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTATGTGTGATGTTCACTaGGAGCACTGTCCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCMCDVH*EHCPWY
Trigger: ATACCAAGGACAGTGCTCCCAGTGAACATCACACAT...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTAGAGAAGACAGTTCCTaGTCACTCTGCCCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVREDSS*SLCPFS
Trigger: TGAAAAAGGGCAGAGTGACCAGGAACTGTCTTCTCT...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTAGACGAACCGGCTCCTaGAAGGCTATTTTCAGACCC +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLRRTGS*KAIFRP
Trigger: GGGTCTGAAAATAGCCTTCCAGGAGCCGGTTCGTCT...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCGTAACTATTTCTACTTaGCCATCAGTGGTAATTAGT +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFVTIST*PSVVIS
Trigger: ACTAATTACCACTGATGGCCAAGTAGAAATAGTTAC...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTGTTGTCCCTGTTTCTaGAGAAGATCTCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYCCPCF*RRSLLL
Trigger: AAGGAGAAGAGATCTTCTCCAGAAACAGGGACAACA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTGTTGTCCCTGTTTCTaGAGAAGATCTCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANCCPCF*RRSLLL
Trigger: AAGGAGAAGAGATCTTCTCCAGAAACAGGGACAACA...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTTGGGAACGAAGCTTTaGGAGATATTTGCCATGCAA +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALLGTKL*EIFAMQ
Trigger: TTGCATGGCAAATATCTCCCAAAGCTTCGTTCCCAA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAATTATCTTCGTTCTTTaGGAACGAAGCTTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPIIFVL*ERSFGR
Trigger: TCTCCCAAAGCTTCGTTCCCAAAGAACGAAGATAAT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAAATATCACCCTGAACTaGTACTCCCCAGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQNITLN*YSPGTG
Trigger: GCCAGTCCCTGGGGAGTACCAGTTCAGGGTGATATT...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCATGGGTCTGGCTGCCTTaGTTGAATGTTCCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAWVWLP*LNVPEL
Trigger: CAACTCTGGAACATTCAACCAAGGCAGCCAGACCCA...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTCTAATTTTACAAGCTaGCTGAACTTGTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSASNFTS*LNLSAS
Trigger: AGATGCTGACAAGTTCAGCCAGCTTGTAAAATTAGA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATCTAATTTTACAAGCTaGCTGAACTTGTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSSNFTS*LNLSAS
Trigger: AGATGCTGACAAGTTCAGCCAGCTTGTAAAATTAGA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAATCCCATTCAGAGCCTaGCTTCATTATCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKIPFRA*LHYQLG
Trigger: ACCCAACTGATAATGAAGCCAGGCTCTGAATGGGAT...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGTCCAGGCTCATAAATaGGTTCTTCATCTATCTCTG +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGVQAHK*VLHLSL
Trigger: CAGAGATAGATGAAGAACCCATTTATGAGCCTGGAC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAGTGCCATATCTGGGCTaGCTCCTTTTTCTGATACTT +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAVPYLG*LLFLIL
Trigger: AAGTATCAGAAAAAGGAGCCAGCCCAGATATGGCAC...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAAACTGGTTCCAAAATTaGTGCCATATCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHINWFQN*CHIWAG
Trigger: GCCAGCCCAGATATGGCACCAATTTTGGAACCAGTT...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTGTCACCTTCTGGAGTTaGCTCTTGGTGAGTTACAAA +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCVTFWS*LLVSYK
Trigger: TTTGTAACTCACCAAGAGCCAACTCCAGAAGGTGAC...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTAGAACCGTCACCTTCTaGAGTTGGCTCTTGGTGAGT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSRTVTF*SWLLVS
Trigger: ACTCACCAAGAGCCAACTCCAGAAGGTGACGGTTCT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAGGCAGGATTCTCTGTaGATAAATGTGGATCACCAT +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANRQDSL*INVDHH
Trigger: ATGGTGATCCACATTTATCCACAGAGAATCCTGCCT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGCATCGCTGAAACTGTaGTCAAAGGCAGCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLASLKL*SKAASL
Trigger: AAGCGAAGCTGCCTTTGACCACAGTTTCAGCGATGC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAGCATCGCTGAAACTGTaGTCAAAGGCAGCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLASLKL*SKAASL
Trigger: AAGCGAAGCTGCCTTTGACCACAGTTTCAGCGATGC...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTCCCATTCATTGTCATaGGTGACAGCCTGCAACGTA +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHSHSLS*VTACNV
Trigger: TACGTTGCAGGCTGTCACCCATGACAATGAATGGGA...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATTGGTCTTGATATCCTaGTTCCGAGCTCAAGGAACT +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPALVLIS*FRAQGT
Trigger: AGTTCCTTGAGCTCGGAACCAGGATATCAAGACCAA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTTGGCTGTGGGATCATaGCCAGTGTACTCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVLAVGS*PVYSKE
Trigger: TTCTTTTGAGTACACTGGCCATGATCCCACAGCCAA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGTGGATGCAATCCATTaGGATCAGCCCACTGAGTTC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLVDAIH*DQPTEF
Trigger: GAACTCAGTGGGCTGATCCCAATGGATTGCATCCAC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAATGCTCTCTGGAATGTaGATGCAATCCATTGGGATC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSMLSGM*MQSIGI
Trigger: GATCCCAATGGATTGCATCCACATTCCAGAGAGCAT...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTAAATTTCACAATGTaGTGGTCACCAACATTCATC +
Preference number: 4 (lower is better)
Translates to: MRLGWNRSHPFIFISASFLNFTM*WSPTFI
Trigger: GATGAATGTTGGTGACCACCACATTGTGAAATTTAA...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAGGAAAAGATTTTCCATaGCATAGTGGTAATCCGCCC +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEGKDFP*HSGNPP
Trigger: GGGCGGATTACCACTATGTCATGGAAAATCTTTTCC...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAGACAGCTCTCCCCAATaGATTTTCCACCATGAGACT +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSADSSPQ*IFHHET
Trigger: AGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTC...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGACAGCTCTCCCCAATaGATTTTCCACCATGAGACT +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEDSSPQ*IFHHET
Trigger: AGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCAACAAGATACTCGCTTaGAAGGATCAAGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGNKILA*KDQEEK
Trigger: TTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTAACAAGATACTCGCTTaGAAGGATCAAGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTNKILA*KDQEEK
Trigger: TTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTT...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTACAAGCCAGATGTTATaGAGGAGGAGATCCAACAGA +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVTSQML*RRRSNR
Trigger: TCTGTTGGATCTCCTCCTTCATAACATCTGGCTTGT...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATACTTCCTGTGACAGGGTaGCCATGGAATTCATTTTAC +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQILPVTG*PWNSFY
Trigger: GTAAAATGAATTCCATGGTCACCCTGTCACAGGAAG...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTTTCATTACTTCCTGTaGCAGGGTGACCATGGAATT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVFHYFL*QGDHGI
Trigger: AATTCCATGGTCACCCTGTCACAGGAAGTAATGAAA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATTTCATTACTTCCTGTaGCAGGGTGACCATGGAATT +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAFHYFL*QGDHGI
Trigger: AATTCCATGGTCACCCTGTCACAGGAAGTAATGAAA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATTTCATTACTTCCTGTaGCAGGGTGACCATGGAATT +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSFHYFL*QGDHGI
Trigger: AATTCCATGGTCACCCTGTCACAGGAAGTAATGAAA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTTAATCAAGGAGCTTTaGGAAACAATGCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGLIKEL*ETMLLP
Trigger: GGGCAAAAGCATTGTTTCTCAAAGCTCCTTGATTAA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGTTAATCAAGGAGCTTTaGGAAACAATGCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWLIKEL*ETMLLP
Trigger: GGGCAAAAGCATTGTTTCTCAAAGCTCCTTGATTAA...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAAAGGGAACAAACTACTaGGGCATTGTGATAAGACGA +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKKGTNY*GIVIRR
Trigger: TCGTCTTATCACAATGCCTCAGTAGTTTGTTCCCTT...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCCTTCATCATTTAGCTaGTGCAGGTTAATTTCATCC +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGPSSFS*CRLISS
Trigger: GGATGAAATTAACCTGCATCAGCTAAATGATGAAGG...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGTCAATACTTAAACCCTaGGCACTGAACTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKESILKP*ALNWVS
Trigger: GGAGACCCAGTTCAGTGCTCAGGGTTTAAGTATTGA...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTCAATACTTAAACCCTaGGCACTGAACTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLSILKP*ALNWVS
Trigger: GGAGACCCAGTTCAGTGCTCAGGGTTTAAGTATTGA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTAGACTCCCAGGGACCTaGCTTTGTAAATTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLRLPGT*LCKFEA
Trigger: AGCCTCGAATTTACAAAGTCAGGTCCCTGGGAGTCT...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCCACTAAACCATTCTaGTCTTCTTTTGGTGGCTTA +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALSTKPF*SSFGGL
Trigger: TAAGCCACCAAAAGAAGATCAGAATGGTTTAGTGGA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGATGCTGTGCAAAAGTGTaGGTTGTCGGTTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRCCAKV*VVGLFH
Trigger: ATGAAACAAACCGACAACTCACACTTTTGCACAGCA...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTGCTGTGCAAAAGTGTaGGTTGTCGGTTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVCCAKV*VVGLFH
Trigger: ATGAAACAAACCGACAACTCACACTTTTGCACAGCA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAATCATTGTCCATATCTaGGATCGTTGCAGTGGACTG +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLIIVHI*DRCSGL
Trigger: CAGTCCACTGCAACGATCTCAGATATGGACAATGAT...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAATGTATCCTTCTGTTTaGCCATCACTGGGGATTGCC +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAMYPSV*PSLGIA
Trigger: GGCAATCCCCAGTGATGGTCAAACAGAAGGATACAT...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGTATCCTTCTGTTTaGCCATCACTGGGGATTGCC +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRMYPSV*PSLGIA
Trigger: GGCAATCCCCAGTGATGGTCAAACAGAAGGATACAT...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAATTCTCATTCAATGTGTaGTGTTCACTGGGAGCACTG +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEFSFNV*CSLGAL
Trigger: CAGTGCTCCCAGTGAACATCACACATTGAATGAGAA...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCATTCTCATTCAATGTGTaGTGTTCACTGGGAGCACTG +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPFSFNV*CSLGAL
Trigger: CAGTGCTCCCAGTGAACATCACACATTGAATGAGAA...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTAGGAGCCTGGTAACATaGATGATGACATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMARSLVT*MMTCLY
Trigger: ATAAAGACATGTCATCATTCATGTTACCAGGCTCCT...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTATTTGCTCTGAATCTGTaGTATGTGAGGAGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLFALNL*YVRSLV
Trigger: TACCAGGCTCCTCACATATCACAGATTCAGAGCAAA...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTTTGCTCTGAATCTGTaGTATGTGAGGAGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHFALNL*YVRSLV
Trigger: TACCAGGCTCCTCACATATCACAGATTCAGAGCAAA...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAGAGCTGATTTTGCCTaGTTTAATGCAGATTTCCTG +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANRADFA*FNADFL
Trigger: CAGGAAATCTGCATTAAATCAGGCAAAATCAGCTCT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTCTCAGTAGTTTCACCTaGATTTCTTTGACTCATGAG +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTLSSFT*ISLTHE
Trigger: CTCATGAGTCAAAGAAATTCAGGTGAAACTACTGAG...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAAGTTCAGATTCTTGGTaGTTCTGTTCACTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSSSDSW*FCSLQL
Trigger: CAACTGGAGTGAACAGAATCACCAAGAATCTGAACT...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTATTAGATTCATTCAATaGATCCCAAGCTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSIRFIQ*IPSSGF
Trigger: GAATCCAGAGCTTGGGATTCATTGAATGAATCTAAT...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAATTAGATTCATTCAATaGATCCCAAGCTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPIRFIQ*IPSSGF
Trigger: GAATCCAGAGCTTGGGATTCATTGAATGAATCTAAT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGGCATTTTGGTGTACTaGAGAATTTATCTCCAACAC +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGGILVY*RIYLQH
Trigger: GTGTTGGAGATAAATTCTTCAGTACACCAAAATGCC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATATCCAGAAAGGGTGACTaGTGGTTGTCACTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHISRKGD*WLSLKG
Trigger: TCCTTTTAGTGACAACCATCAGTCACCCTTTCTGGA...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGGAGTTGGCTCTTGGTaGGTTACAAAAATGCTAGTT +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSGVGSW*VTKMLV
Trigger: AACTAGCATTTTTGTAACTCACCAAGAGCCAACTCC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCCATGTGTAGTGCATaGCGATCTTCATTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVSMCSA*RSSFFS
Trigger: AGAGAAGAATGAAGATCGTCATGCACTACACATGGA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATAGGGCTTTCAAAAGATaGTCTCGTATCGCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYRAFKR*SRIAFR
Trigger: TCTAAAAGCGATACGAGATCATCTTTTGAAAGCCCT...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAAGTTTTAGCTGCCTCTaGTGCTTCCCTCAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLSFSCL*CFPQFF
Trigger: GAAGAACTGAGGGAAGCATCAGAGGCAGCTAAAACT...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS-3UTR TCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTGTTTCAACAGAACCATaGACCAGAAAAGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCVSTEP*TRKASS
Trigger: AGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAAC...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTAGCCCGGCTTCCCTTTaGGAAGTTAAAGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSSPASL*EVKGDS
Trigger: AGAATCTCCTTTAACTTCTCAAAGGGAAGCCGGGCT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAGCTGAGTTTATGGCCTaGAACTCAGAGAGCTACCAA +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLAEFMA*NSESYQ
Trigger: TTGGTAGCTCTCTGAGTTTCAGGCCATAAACTCAGC...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGCTGAGTTTATGGCCTaGAACTCAGAGAGCTACCAA +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEAEFMA*NSESYQ
Trigger: TTGGTAGCTCTCTGAGTTTCAGGCCATAAACTCAGC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTGCTGAGTTTATGGCCTaGAACTCAGAGAGCTACCAA +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSAEFMA*NSESYQ
Trigger: TTGGTAGCTCTCTGAGTTTCAGGCCATAAACTCAGC...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAACTACCAAATGATTTTTaGGTAGGCCACCTTGCACTT +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSELPNDF*VGHLAL
Trigger: AAGTGCAAGGTGGCCTACTCAAAAATCATTTGGTAG...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACTGAATGCTACCAAATaGTTTTTGAGTAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPALNATK*FLSRPP
Trigger: AGGTGGCCTACTCAAAAATCATTTGGTAGCATTCAG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTCTGAATGCTACCAAATaGTTTTTGAGTAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCLNATK*FLSRPP
Trigger: AGGTGGCCTACTCAAAAATCATTTGGTAGCATTCAG...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCATTCATGTCAATGCGCTaGTCTTGTTCTCCAATGACC +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPFMSMR*SCSPMT
Trigger: GGTCATTGGAGAACAAGAGCAGCGCATTGACATGAA...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTACTATGCCCTCAGGTTTaGACCACTACACTGAACACT +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLLCPQV*TTTLNT
Trigger: AGTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAG...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAGAGAAACAATGCTTTTaGCCCAATGACCCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLEKQCF*PNDPLV
Trigger: AACCAAGGGGTCATTGGGGCAAAAGCATTGTTTCTC...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGAGCTTTGAGAAACAATaGTTTTGCCCCAATGACCCC +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLSFEKQ*FCPNDP
Trigger: GGGGTCATTGGGGCAAAAGCATTGTTTCTCAAAGCT...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTCCACACTGAGCTACTaGCCTCAAACAAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHSTLSY*PQTNFL
Trigger: GAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGA...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGTCCACACTGAGCTACTaGCCTCAAACAAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLSTLSY*PQTNFL
Trigger: GAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGA...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATGTCTTGAATATCATTaGTACCCAGTTCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSCLEYH*YPVQAD
Trigger: GTCAGCCTGAACTGGGTAGCAATGATATTCAAGACA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAAGTCATTGTTTTTCTTaGCCCAGATTTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRSHCFS*PRFLEL
Trigger: CAGCTCCAGAAATCTGGGGCAAGAAAAACAATGACT...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAAATGTCAGTCTCCTCTaGCGTGGAGTTACCATCTTT +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLNVSLL*RGVTIF
Trigger: AAAGATGGTAACTCCACGGCAGAGGAGACTGACATT...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAATGTACAGTTGCATCATaGTGGGGTCGTCGTAACTGG +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQCTVAS*WGRRNW
Trigger: CCAGTTACGACGACCCCAGCATGATGCAACTGTACA...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCCAATCTACCTGATTTaGTTCCTGATACTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVPIYLI*FLILQA
Trigger: GGCTTGGAGTATCAGGAAGCAAATCAGGTAGATTGG...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAGGAGGCAATTCCCTTTaGTCTGAATCTGTGATATGT +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAGGNSL*SESVIC
Trigger: ACATATCACAGATTCAGAGCAAAGGGAATTGCCTCC...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTAGTCGCCAAGGATGCTaGATCACTTTGCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLSRQGC*ITLQGF
Trigger: GAAACCCTGCAAAGTGATGCAGCATCCTTGGCGACT...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAAGTTCCTGGTCACTCTaGCCTTTTTCAGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPSSWSL*PFSEIP
Trigger: AGGGATTTCTGAAAAAGGGCAGAGTGACCAGGAACT...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTGGGTATCTTTTGGCTaGAGGTTATCTGCGGACATC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLWVSFG*RLSADI
Trigger: GATGTCCGCAGATAACCTGCAGCCAAAAGATACCCA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCATGTGCTGCTGACATaGACATCACTGTCTATAGGG +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLHVLLT*TSLSIG
Trigger: CCCTATAGACAGTGATGTGCATGTCAGCAGCACATG...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACTCTGGCTGCACAGTTaGAGAAATGTCATGTTCATT +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPALWLHS*RNVMFI
Trigger: AATGAACATGACATTTCTGCAACTGTGCAGCCAGAG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGCTTTGGGAGATATTTaGCATGCAACATCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVALGDI*HATSPV
Trigger: AACAGGAGATGTTGCATGGCAAATATCTCCCAAAGC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAGCTTTGGGAGATATTTaGCATGCAACATCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEALGDI*HATSPV
Trigger: AACAGGAGATGTTGCATGGCAAATATCTCCCAAAGC...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAACAACTATTTTCCTCTaGGTGAGTAAAGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSETTIFL*VSKGCV
Trigger: GACACAGCCTTTACTCACGCAGAGGAAAATAGTTGT...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTAGGATTCTCACCATCTaGTTTCAAACTGAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVRILTI*FQTEGL
Trigger: AAGCCCTTCAGTTTGAAAGCAGATGGTGAGAATCCT...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCTGTCATGTTCGCAGTaGGTCAGGATATCAGGATTC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLLSCSQ*VRISGF
Trigger: GAATCCTGATATCCTGACGCACTGCGAACATGACAG...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTCTGTCATGTTCGCAGTaGGTCAGGATATCAGGATTC +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSLSCSQ*VRISGF
Trigger: GAATCCTGATATCCTGACGCACTGCGAACATGACAG...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGATGGAGGCAGCACAGTTaGGTTTTCAGAATCGAGTTC +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRWRQHS*VFRIEF
Trigger: GAACTCGATTCTGAAAACGCAACTGTGCTGCCTCCA...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGATCAAACAAAGCTCTTaGACCAGGCTGACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLIKQSS*TRLTFR
Trigger: CCTGAAAGTCAGCCTGGTGCAAGAGCTTTGTTTGAT...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGATGAGCAGATATCTTaGTTCCCTAGGTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEDEQIS*FPRSPS
Trigger: TGATGGGGACCTAGGGAAGCAAGATATCTGCTCATC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAGATGAGCAGATATCTTaGTTCCCTAGGTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSADEQIS*FPRSPS
Trigger: TGATGGGGACCTAGGGAAGCAAGATATCTGCTCATC...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTAGAAAGCACTATCTCTaGTGCTCTGCATCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLRKHYL*CSASQR
Trigger: TCTCTGGGATGCAGAGCAGCAGAGATAGTGCTTTCT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCACAAAATGTTGGAGCCTaGTCCTACCGGCAAATAAAC +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPQNVGA*SYRQIN
Trigger: GTTTATTTGCCGGTAGGAGCAGGCTCCAACATTTTG...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCAAAATGTTGGAGCCTaGTCCTACCGGCAAATAAAC +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVQNVGA*SYRQIN
Trigger: GTTTATTTGCCGGTAGGAGCAGGCTCCAACATTTTG...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAATTCTGATATTTCCTTaGTGGCACCATTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSILIFP*WHHLVV
Trigger: GACCACCAAATGGTGCCAGCAAGGAAATATCAGAAT...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCATTCTAATTCAGCTATaGTTTCTCTTTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALILIQL*FLFLHR
Trigger: CCTGTGAAGAAAGAGAAAGCATAGCTGAATTAGAAT...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAAGAAGACATTTTCTCTaGAGAGAGACCTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPRRHFL*RETFSF
Trigger: GAAAGAAAAGGTCTCTCTGCAGAGAAAATGTCTTCT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAATAGACTCTGACTCTTaGCCAGAATCTTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKIDSDS*PESLLA
Trigger: AGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTAT...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCAAGAAGGCTTCATTTTaGCAATTGCAACCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGKKASF*QLQPKQ
Trigger: CTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCTT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGTAATAGGAGACACTaGAGACTAAGAATGGTTCCC +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPACNRRH*RLRMVP
Trigger: GGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAGTCAACACTGTGTTCTaGGAGAGGTGTAATTTGGGC +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLVNTVF*ERCNLG
Trigger: GCCCAAATTACACCTCTCCCAGAACACAGTGTTGAC...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGATTGGAGACCATCTCTaGACACCTCCTGTTGATGAC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEIGDHL*TPPVDD
Trigger: GTCATCAACAGGAGGTGTCCAGAGATGGTCTCCAAT...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAAGGCTGGTTCTTCAGTaGATGGCGAGCTTTCTACTA +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLRLVLQ*MASFLL
Trigger: TAGTAGAAAGCTCGCCATCCACTGAAGAACCAGCCT...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCAGATTCCTGTTCACTaGAACTCCACGCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLQIPVH*NSTHLQ
Trigger: TTGCAGATGCGTGGAGTTCCAGTGAACAGGAATCTG...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAAGGCTCTCCTATCAATaGAGCTTGGCTTATGCTCTT +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPRLSYQ*SLAYAL
Trigger: AAGAGCATAAGCCAAGCTCCATTGATAGGAGAGCCT...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAATGTCTTGCTGCTTGTTaGGTGCAAATTCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSECLAAC*VQIPGI
Trigger: AATACCTGGAATTTGCACCCAACAAGCAGCAAGACA...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAACTTGCCCCAGATTTCTaGAGCTGCTTCATTGTTTAT +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKLAPDF*SCFIVY
Trigger: ATAAACAATGAAGCAGCTCCAGAAATCTGGGGCAAG...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTCAAAGATGTGATCCCTaGAGTCATTGTTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMAQRCDP*SHCFSC
Trigger: GCAAGAAAAACAATGACTCCAGGGATCACATCTTTG...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAGATCCAGATCAGAACTaGGATTTCCAGGTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEDPDQN*DFQVQR
Trigger: TCTTTGCACCTGGAAATCCCAGTTCTGATCTGGATC...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAATTCTGATCTTCTTTTaGTGGCTTAGAATTAGTCCA +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSILIFF*WLRISP
Trigger: TGGACTAATTCTAAGCCACCAAAAGAAGATCAGAAT...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTATTCTGATCTTCTTTTaGTGGCTTAGAATTAGTCCA +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAILIFF*WLRISP
Trigger: TGGACTAATTCTAAGCCACCAAAAGAAGATCAGAAT...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCACTGAGGTGGAATAATTaGTATCTAAGGGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPLRWNN*YLRGKA
Trigger: TGCCTTCCCCCTTAGATACCAATTATTCCACCTCAG...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATACTGAGATCGTTGCAGTaGACTGAGTATCCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHILRSLQ*TEYPPK
Trigger: TTTTGGAGGATACTCAGTCCACTGCAACGATCTCAG...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGCTGAGATCGTTGCAGTaGACTGAGTATCCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLLRSLQ*TEYPPK
Trigger: TTTTGGAGGATACTCAGTCCACTGCAACGATCTCAG...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAGCCATGACCTTTCCATaGATCTGGGTGTGGAAAATA +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIAMTFP*IWVWKI
Trigger: TATTTTCCACACCCAGATCCATGGAAAGGTCATGGC...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAAGAGAAGACAGTTCCTaGTCACTCTGCCCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEREDSS*SLCPFS
Trigger: TGAAAAAGGGCAGAGTGACCAGGAACTGTCTTCTCT...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATTCATGGGTATCTTTTaGCTGCAGGTTATCTGCGGA +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIFMGIF*LQVICG
Trigger: TCCGCAGATAACCTGCAGCCAAAAGATACCCATGAA...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAATGAGGTGTTTTTCATaGGTATCTTTTGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAMRCFS*VSFGCR
Trigger: CCTGCAGCCAAAAGATACCCATGAAAAACACCTCAT...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTGCCTGTTTCAGGACTaGATAAAGAGGAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYCLFQD*IKRKRN
Trigger: ATTCCTTTTCCTCTTTATCCAGTCCTGAAACAGGCA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTATGAATCCCAAGCTCTaGATTCATCCTCAGCAACGT +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVMNPKL*IHPQQR
Trigger: ACGTTGCTGAGGATGAATCCAGAGCTTGGGATTCAT...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGTTGTCCCTGTTTCTaGAGAAGATCTCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPACCPCF*RRSLLL
Trigger: AAGGAGAAGAGATCTTCTCCAGAAACAGGGACAACA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTTGGGAACGAAGCTTTaGGAGATATTTGCCATGCAA +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVLGTKL*EIFAMQ
Trigger: TTGCATGGCAAATATCTCCCAAAGCTTCGTTCCCAA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAGTCAGCATCTGGGTCTaGCTGCCTTGGTTGAATGTT +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQVSIWV*LPWLNV
Trigger: AACATTCAACCAAGGCAGCCAGACCCAGATGCTGAC...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAGTCCAGGCTCATAAATaGGTTCTTCATCTATCTCTG +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAVQAHK*VLHLSL
Trigger: CAGAGATAGATGAAGAACCCATTTATGAGCCTGGAC...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGTCCAGGCTCATAAATaGGTTCTTCATCTATCTCTG +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSVQAHK*VLHLSL
Trigger: CAGAGATAGATGAAGAACCCATTTATGAGCCTGGAC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAAATCGAGTTCTGCATTaGATGGGACAAACTCCCGTC +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLNRVLH*MGQTPV
Trigger: GACGGGAGTTTGTCCCATCCAATGCAGAACTCGATT...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTGATTCTTCTGTCAACTaGTTCCAAAATTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTDSSVN*FQNWCH
Trigger: ATGGCACCAATTTTGGAACCAGTTGACAGAAGAATC...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGATTCTTCTGTCAACTaGTTCCAAAATTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWDSSVN*FQNWCH
Trigger: ATGGCACCAATTTTGGAACCAGTTGACAGAAGAATC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAAGGCAGGATTCTCTGTaGATAAATGTGGATCACCAT +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSRQDSL*INVDHH
Trigger: ATGGTGATCCACATTTATCCACAGAGAATCCTGCCT...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGTCTTCATCGATATTCTaGCCCATTACATCATATTCA +
Preference number: 4 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVSSSIF*PITSYS
Trigger: TGAATATGATGTAATGGGCCAGAATATCGATGAAGA...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTATTTTTGGTCTCAGCCTaGTTTCCCTCACTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLFLVSA*FPSLLR
Trigger: TCGAAGAAGTGAGGGAAACCAGGCTGAGACCAAAAA...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATACTGATATTTCCTTGCTaGCACCATTTGGTGGTCCTA +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHILIFPC*HHLVVL
Trigger: TAGGACCACCAAATGGTGCCAGCAAGGAAATATCAG...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGCTGATATTTCCTTGCTaGCACCATTTGGTGGTCCTA +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLLIFPC*HHLVVL
Trigger: TAGGACCACCAAATGGTGCCAGCAAGGAAATATCAG...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCCCATTCATTGTCATaGGTGACAGCCTGCAACGTA +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSSHSLS*VTACNV
Trigger: TACGTTGCAGGCTGTCACCCATGACAATGAATGGGA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTATTGGTCTTGATATCCTaGTTCCGAGCTCAAGGAACT +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLLVLIS*FRAQGT
Trigger: AGTTCCTTGAGCTCGGAACCAGGATATCAAGACCAA...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTTGGTCTTGATATCCTaGTTCCGAGCTCAAGGAACT +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHLVLIS*FRAQGT
Trigger: AGTTCCTTGAGCTCGGAACCAGGATATCAAGACCAA...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGTTGGTCTTGATATCCTaGTTCCGAGCTCAAGGAACT +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLLVLIS*FRAQGT
Trigger: AGTTCCTTGAGCTCGGAACCAGGATATCAAGACCAA...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCATGGCATCCTCCTTCTTaGGGTTGCACCATTCAAGTA +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAWHPPS*GCTIQV
Trigger: TACTTGAATGGTGCAACCCCAAGAAGGAGGATGCCA...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAGTGGATGCAATCCATTaGGATCAGCCCACTGAGTTC +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQVDAIH*DQPTEF
Trigger: GAACTCAGTGGGCTGATCCCAATGGATTGCATCCAC...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGATGCTCTCTGGAATGTaGATGCAATCCATTGGGATC +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLMLSGM*MQSIGI
Trigger: GATCCCAATGGATTGCATCCACATTCCAGAGAGCAT...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCACCTCTTCTTCCAGCATaGCCAACTAAGGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPPLLPA*PTKAFL
Trigger: AAGAAAAGCCTTAGTTGGCCATGCTGGAAGAAGAGG...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATTTGAGGCACATAATTaGCAAAATAGGAAAGTACAC +
Preference number: 4 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSFEAHN*QNRKVH
Trigger: GTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTAATGAAGTATTGAAATaGAAGGTCCTACTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSANEVLK*KVLLSC
Trigger: GCAAGAAAGTAGGACCTTCCATTTCAATACTTCATT...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCAATGAAGTATTGAAATaGAAGGTCCTACTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KVVTSSFYPGLQISWTALNEVLK*KVLLSC
Trigger: GCAAGAAAGTAGGACCTTCCATTTCAATACTTCATT...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAGTTTTACACCTTGTGTaGTTTGTGGCTGTCCTAGTC +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEVLHLV*FVAVLV
Trigger: GACTAGGACAGCCACAAACCACACAAGGTGTAAAAC...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTAATTTCACAATGTGGTaGTCACCAACATTCATCAGG +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTNFTMW*SPTFIR
Trigger: CCTGATGAATGTTGGTGACCACCACATTGTGAAATT...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCATTGATGATGCTCTCTaGAATGTGGATGCAATCCAT +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGIDDAL*NVDAIH
Trigger: ATGGATTGCATCCACATTCCAGAGAGCATCATCAAT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426088.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTCAAGTTCATCCACATTaGTGTCAATTTCATCTGGAC +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVQVHPH*CQFHLD
Trigger: GTCCAGATGAAATTGACATCAATGTGGATGAACTTG...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCACAAGTTCATCCACATTaGTGTCAATTTCATCTGGAC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSQVHPH*CQFHLD
Trigger: GTCCAGATGAAATTGACATCAATGTGGATGAACTTG...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATATTCTGGAATAGACTCTaGCTCTTGGCCAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIFWNRL*LLARIF
Trigger: AAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAA...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTTCTGGAATAGACTCTaGCTCTTGGCCAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHFWNRL*LLARIF
Trigger: AAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAA...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAATTCTGGAATAGACTCTaGCTCTTGGCCAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEFWNRL*LLARIF
Trigger: AAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAA...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTTTCTGGAATAGACTCTaGCTCTTGGCCAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVFWNRL*LLARIF
Trigger: AAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAA...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAGGAAAAGATTTTCCATaGCATAGTGGTAATCCGCCC +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLGKDFP*HSGNPP
Trigger: GGGCGGATTACCACTATGTCATGGAAAATCTTTTCC...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGGAAAAGATTTTCCATaGCATAGTGGTAATCCGCCC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEGKDFP*HSGNPP
Trigger: GGGCGGATTACCACTATGTCATGGAAAATCTTTTCC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGACAGAGGTGAAGCAATaGGGTCAGAGAAACTCAATC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKETEVKQ*GQRNSI
Trigger: GATTGAGTTTCTCTGACCTCATTGCTTCACCTCTGT...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTACAGAGGTGAAGCAATaGGGTCAGAGAAACTCAATC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLTEVKQ*GQRNSI
Trigger: GATTGAGTTTCTCTGACCTCATTGCTTCACCTCTGT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGCTTCCTGTGACAGGGTaGCCATGGAATTCATTTTAC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKELPVTG*PWNSFY
Trigger: GTAAAATGAATTCCATGGTCACCCTGTCACAGGAAG...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCTTCCTGTGACAGGGTaGCCATGGAATTCATTTTAC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLLPVTG*PWNSFY
Trigger: GTAAAATGAATTCCATGGTCACCCTGTCACAGGAAG...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTTTTGCACCACTACACTaGACACTGGATTTTTCATTA +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTFAPLH*TLDFSL
Trigger: TAATGAAAAATCCAGTGTTCAGTGTAGTGGTGCAAA...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTTTGCACCACTACACTaGACACTGGATTTTTCATTA +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGFAPLH*TLDFSL
Trigger: TAATGAAAAATCCAGTGTTCAGTGTAGTGGTGCAAA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGTTTGCACCACTACACTaGACACTGGATTTTTCATTA +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWFAPLH*TLDFSL
Trigger: TAATGAAAAATCCAGTGTTCAGTGTAGTGGTGCAAA...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTTCTATTTACTTGGGGTaGATGTACATGGTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: SHTSENVLESNPIEHCMASIYLG*MYMVAF
Trigger: AAAAGCTACCATGTACATTCACCCCAAGTAAATAGA...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATTAATCAAGGAGCTTTaGGAAACAATGCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSLIKEL*ETMLLP
Trigger: GGGCAAAAGCATTGTTTCTCAAAGCTCCTTGATTAA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGATTTTCTTCCACACTaGGCTACTGCCCTCAAACAA +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEDFLPH*ATALKQ
Trigger: TTGTTTGAGGGCAGTAGCTCAGTGTGGAAGAAAATC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCACCTTCATCATTTAGCTaGTGCAGGTTAATTTCATCC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSPSSFS*CRLISS
Trigger: GGATGAAATTAACCTGCATCAGCTAAATGATGAAGG...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTCCTTCATCATTTAGCTaGTGCAGGTTAATTTCATCC +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCPSSFS*CRLISS
Trigger: GGATGAAATTAACCTGCATCAGCTAAATGATGAAGG...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAAGCTGGAGAACAGGATaGGGACATCAAAACCAAACT +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRSWRTG*GHQNQT
Trigger: AGTTTGGTTTTGATGTCCTCATCCTGTTCTCCAGCT...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTCCTCATTTTTGTCTTaGATATCATTGCTACCCAGT +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGSSFLS*ISLLPS
Trigger: ACTGGGTAGCAATGATATTCAAGACAAAAATGAGGA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTGCTGTGCAAAAGTGTaGGTTGTCGGTTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHCCAKV*VVGLFH
Trigger: ATGAAACAAACCGACAACTCACACTTTTGCACAGCA...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTCTCATTCAATGTGTaGTGTTCACTGGGAGCACTG +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSFSFNV*CSLGAL
Trigger: CAGTGCTCCCAGTGAACATCACACATTGAATGAGAA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTTTGCTCTGAATCTGTaGTATGTGAGGAGCCTGGTA +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLFALNL*YVRSLV
Trigger: TACCAGGCTCCTCACATATCACAGATTCAGAGCAAA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAGAAATTCATCCCATCTaGAGTCTCAGTAGTTTCACC +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEEIHPI*SLSSFT
Trigger: GGTGAAACTACTGAGACTTCAGATGGGATGAATTTC...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTACCTTCCAGAAAGGGTaGCTGATGGTTGTCACTAAA +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSTFQKG*LMVVTK
Trigger: TTTAGTGACAACCATCAGTCACCCTTTCTGGAAGGT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTATTTTACAAGCTGGCTaGACTTGTCAGCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLILQAG*TCQHLG
Trigger: ACCCAGATGCTGACAAGTTCAGCCAGCTTGTAAAAT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGATTTTACAAGCTGGCTaGACTTGTCAGCATCTGGGT +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEILQAG*TCQHLG
Trigger: ACCCAGATGCTGACAAGTTCAGCCAGCTTGTAAAAT...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTAGCTGCCCACCCTCTTaGAAGTTGCCATGTAAAATA +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLSCPPS*KLPCKI
Trigger: TATTTTACATGGCAACTTTCAAGAGGGTGGGCAGCT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGTTTGCTTCAGAATCGTaGCATATATCAGGGCTGTCG +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEFASES*HISGLS
Trigger: CGACAGCCCTGATATATGTCACGATTCTGAAGCAAA...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAGGAGTTGGCTCTTGGTaGGTTACAAAAATGCTAGTT +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIGVGSW*VTKMLV
Trigger: AACTAGCATTTTTGTAACTCACCAAGAGCCAACTCC...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGGTTTCAACAGAACCATaGACCAGAAAAGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLVSTEP*TRKASS
Trigger: AGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAAC...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAGTTTCAACAGAACCATaGACCAGAAAAGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPVSTEP*TRKASS
Trigger: AGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAAC...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTTTCCTGGGGAGAGTTaGGACCTGTGTACTTTAAAC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLFPGES*DLCTLN
Trigger: GTTTAAAGTACACAGGTCTCAACTCTCCCCAGGAAA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTACTGAATGCTACCAAATaGTTTTTGAGTAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLLNATK*FLSRPP
Trigger: AGGTGGCCTACTCAAAAATCATTTGGTAGCATTCAG...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAAGAGGCCTACAGACTTaGAATCTTGTTGGCATTTTA +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSRGLQT*NLVGIL
Trigger: TAAAATGCCAACAAGATTTCAAGTCTGTAGGCCTCT...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAGTACTCAAAAGAATCTaGTTCATCGGGGGTATCAAG +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEVLKRI*FIGGIK
Trigger: CTTGATACCCCCGATGAAGCAGATTCTTTTGAGTAC...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGTTCATGTCAATGCGCTaGTCTTGTTCTCCAATGACC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEFMSMR*SCSPMT
Trigger: GGTCATTGGAGAACAAGAGCAGCGCATTGACATGAA...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCACTCTGTCTACCTATCTaGTTAGGGATTATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPLCLPI*LGIIFL
Trigger: TAGAAAAATAATCCCTAAGCAGATAGGTAGACAGAG...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGAGAAACAATGCTTTTaGCCCAATGACCCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEEKQCF*PNDPLV
Trigger: AACCAAGGGGTCATTGGGGCAAAAGCATTGTTTCTC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAATCGCCAGCACACTGCTaGCAACAAGTGTTATCGATA +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQSPAHC*QQVLSI
Trigger: TATCGATAACACTTGTTGGCAGCAGTGTGCTGGCGA...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAGTGACCTGTGTCAGTTaGTTTTTGGGTCATATCTTC +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLVTCVS*FLGHIF
Trigger: GAAGATATGACCCAAAAAGCAACTGACACAGGTCAC...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTGGAACTCCACGCATCTaGAATATTTTTGGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCGTPRI*NIFGVN
Trigger: ATTGACTCCAAAAATATTGCAGATGCGTGGAGTTCC...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTAATGTCAGTCTCCTCTaGCGTGGAGTTACCATCTTT +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLNVSLL*RGVTIF
Trigger: AAAGATGGTAACTCCACGGCAGAGGAGACTGACATT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTGGAGGCAATTCCCTTTaGTCTGAATCTGTGATATGT +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVGGNSL*SESVIC
Trigger: ACATATCACAGATTCAGAGCAAAGGGAATTGCCTCC...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAGGAGGCAATTCCCTTTaGTCTGAATCTGTGATATGT +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIGGNSL*SESVIC
Trigger: ACATATCACAGATTCAGAGCAAAGGGAATTGCCTCC...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAAGTTCCTGGTCACTCTaGCCTTTTTCAGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRSSWSL*PFSEIP
Trigger: AGGGATTTCTGAAAAAGGGCAGAGTGACCAGGAACT...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATACTCTGGCTGCACAGTTaGAGAAATGTCATGTTCATT +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHILWLHS*RNVMFI
Trigger: AATGAACATGACATTTCTGCAACTGTGCAGCCAGAG...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAATCCACTGCTGTAATCTaGATTTCAGTCTCCGTTAAT +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSESTAVI*ISVSVN
Trigger: ATTAACGGAGACTGAAATGCAGATTACAGCAGTGGA...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAGGGAGATATTTGCCATaGAACATCTCCTGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQGRYLP*NISCCP
Trigger: GGGACAACAGGAGATGTTGCATGGCAAATATCTCCC...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACACAACTATTTTCCTCTaGGTGAGTAAAGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHTTIFL*VSKGCV
Trigger: GACACAGCCTTTACTCACGCAGAGGAAAATAGTTGT...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAAGGATTCTCACCATCTaGTTTCAAACTGAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIRILTI*FQTEGL
Trigger: AAGCCCTTCAGTTTGAAAGCAGATGGTGAGAATCCT...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTATGCAAGCACTGAGGTaGTTCTCAGTCTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLMQALR*FSVSCF
Trigger: AAAGCAAGAGACTGAGAAGCACCTCAGTGCTTGCAT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATTCAGAATCGAGTTCTaGATTGGATGGGACAAACTC +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIFRIEF*IGWDKL
Trigger: GAGTTTGTCCCATCCAATGCAGAACTCGATTCTGAA...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATATTCAGAATCGAGTTCTaGATTGGATGGGACAAACTC +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIFRIEF*IGWDKL
Trigger: GAGTTTGTCCCATCCAATGCAGAACTCGATTCTGAA...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAATTCTGATATTTCCTTaGTGGCACCATTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIILIFP*WHHLVV
Trigger: GACCACCAAATGGTGCCAGCAAGGAAATATCAGAAT...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTTATTCTGATTTTATCTaGTCAGGCTCTTTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTYSDFI*SGSLVG
Trigger: TCCTACCAAAGAGCCTGAGCAGATAAAATCAGAATA...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCAGAAGACATTTTCTCTaGAGAGAGACCTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGRRHFL*RETFSF
Trigger: GAAAGAAAAGGTCTCTCTGCAGAGAAAATGTCTTCT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGAGAAGACATTTTCTCTaGAGAGAGACCTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWRRHFL*RETFSF
Trigger: GAAAGAAAAGGTCTCTCTGCAGAGAAAATGTCTTCT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGAAACCATTCTTAGCTTaGAGTGGTGAGCGAGACTTA +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLKPFLA*SGERDL
Trigger: TAAGTCTCGCTCACCACTGCAAGCTAAGAATGGTTT...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAGAAAGATTGATATTTaGGGCTGTGAGCTTGATTCT +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANRKIDI*GCELDS
Trigger: AGAATCAAGCTCACAGCCCCAAATATCAATCTTTCT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCAGAAAGATTGATATTTaGGGCTGTGAGCTTGATTCT +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGRKIDI*GCELDS
Trigger: AGAATCAAGCTCACAGCCCCAAATATCAATCTTTCT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGGATGTCAATTTCATCTaGACTGTCCAAGTTATCATC +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALDVNFI*TVQVII
Trigger: GATGATAACTTGGACAGTCCAGATGAAATTGACATC...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAATAGACTCTGACTCTTaGCCAGAATCTTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPIDSDS*PESLLA
Trigger: AGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTAT...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAAAGAAGGCTTCATTTTaGCAATTGCAACCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKKKASF*QLQPKQ
Trigger: CTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCTT...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATATGTAATAGGAGACACTaGAGACTAAGAATGGTTCCC +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHICNRRH*RLRMVP
Trigger: GGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACA...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAGAAAAGAGAAAACGATaGAGGCTTATGGAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKEKRKR*RLMEER
Trigger: TCTTTCCTCCATAAGCCTCCATCGTTTTCTCTTTTC...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAATTCATGGGTGTTGGTaGGATCCTCTTTCCAGTATT +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEIHGCW*DPLSSI
Trigger: AATACTGGAAAGAGGATCCCACCAACACCCATGAAT...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAATTCATGGGTGTTGGTaGGATCCTCTTTCCAGTATT +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLIHGCW*DPLSSI
Trigger: AATACTGGAAAGAGGATCCCACCAACACCCATGAAT...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGCTACTAAACTATTCATaGGTGTTGGTGGGATCCTCT +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLLLNYS*VLVGSS
Trigger: AGAGGATCCCACCAACACCCATGAATAGTTTAGTAG...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATCATTGTTTATCTCACTaGGTGAATTGTCCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYHCLSH*VNCPVV
Trigger: AACTACTGGACAATTCACCCAGTGAGATAAACAATG...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATCATTGTTTATCTCACTaGGTGAATTGTCCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANHCLSH*VNCPVV
Trigger: AACTACTGGACAATTCACCCAGTGAGATAAACAATG...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAACAAAGATGTGATCCCTaGAGTCATTGTTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKQRCDP*SHCFSC
Trigger: GCAAGAAAAACAATGACTCCAGGGATCACATCTTTG...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTCAAAGATGTGATCCCTaGAGTCATTGTTTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVQRCDP*SHCFSC
Trigger: GCAAGAAAAACAATGACTCCAGGGATCACATCTTTG...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCTGATCTTCTTTTGGTaGCTTAGAATTAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGLIFFW*LRISPC
Trigger: ACATGGACTAATTCTAAGCCACCAAAAGAAGATCAG...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATCTGATCTTCTTTTGGTaGCTTAGAATTAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYLIFFW*LRISPC
Trigger: ACATGGACTAATTCTAAGCCACCAAAAGAAGATCAG...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGTGTAAGAGTCTGAGGTaGAATAATTGGTATCTAAGG +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWCKSLR*NNWYLR
Trigger: CCTTAGATACCAATTATTCCACCTCAGACTCTTACA...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTGTAAGAGTCTGAGGTaGAATAATTGGTATCTAAGG +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALCKSLR*NNWYLR
Trigger: CCTTAGATACCAATTATTCCACCTCAGACTCTTACA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGCATCCAGGTTGTGAGTaGTATTTATTTCAGAACTGT +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALHPGCE*YLFQNC
Trigger: ACAGTTCTGAAATAAATACCACTCACAACCTGGATG...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATCATCCAGGTTGTGAGTaGTATTTATTTCAGAACTGT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYHPGCE*YLFQNC
Trigger: ACAGTTCTGAAATAAATACCACTCACAACCTGGATG...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTGAGATCGTTGCAGTaGACTGAGTATCCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSALRSLQ*TEYPPK
Trigger: TTTTGGAGGATACTCAGTCCACTGCAACGATCTCAG...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAGTGTGGAAAATACCCTaGATTCTCAAGCCTAGTCGC +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQVWKIP*ILKPSR
Trigger: GCGACTAGGCTTGAGAATCCAGGGTATTTTCCACAC...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGCCATGACCTTTCCATaGATCTGGGTGTGGAAAATA +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEAMTFP*IWVWKI
Trigger: TATTTTCCACACCCAGATCCATGGAAAGGTCATGGC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGTTCATGGGTATCTTTTaGCTGCAGGTTATCTGCGGA +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEFMGIF*LQVICG
Trigger: TCCGCAGATAACCTGCAGCCAAAAGATACCCATGAA...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTGCCTGTTTCAGGACTaGATAAAGAGGAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVCLFQD*IKRKRN
Trigger: ATTCCTTTTCCTCTTTATCCAGTCCTGAAACAGGCA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTTGCCTGTTTCAGGACTaGATAAAGAGGAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCCLFQD*IKRKRN
Trigger: ATTCCTTTTCCTCTTTATCCAGTCCTGAAACAGGCA...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAATGAATCCCAAGCTCTaGATTCATCCTCAGCAACGT +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAMNPKL*IHPQQR
Trigger: ACGTTGCTGAGGATGAATCCAGAGCTTGGGATTCAT...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAATTGGGAACGAAGCTTTaGGAGATATTTGCCATGCAA +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTELGTKL*EIFAMQ
Trigger: TTGCATGGCAAATATCTCCCAAAGCTTCGTTCCCAA...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTCTAATTTTACAAGCTaGCTGAACTTGTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANSNFTS*LNLSAS
Trigger: AGATGCTGACAAGTTCAGCCAGCTTGTAAAATTAGA...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTATCCCATTCAGAGCCTaGCTTCATTATCAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLIPFRA*LHYQLG
Trigger: ACCCAACTGATAATGAAGCCAGGCTCTGAATGGGAT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTAATCGAGTTCTGCATTaGATGGGACAAACTCCCGTC +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLNRVLH*MGQTPV
Trigger: GACGGGAGTTTGTCCCATCCAATGCAGAACTCGATT...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGTGCCATATCTGGGCTaGCTCCTTTTTCTGATACTT +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEVPYLG*LLFLIL
Trigger: AAGTATCAGAAAAAGGAGCCAGCCCAGATATGGCAC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAAACTGGTTCCAAAATTaGTGCCATATCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQNWFQN*CHIWAG
Trigger: GCCAGCCCAGATATGGCACCAATTTTGGAACCAGTT...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAAGGCAGGATTCTCTGTaGATAAATGTGGATCACCAT +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPRQDSL*INVDHH
Trigger: ATGGTGATCCACATTTATCCACAGAGAATCCTGCCT...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAAAGAACATCCAACTCTaGTCTTGTGCAGGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLKNIQL*SCAGLS
Trigger: TGAAAGCCCTGCACAAGACCAGAGTTGGATGTTCTT...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTTGGCTGTGGGATCATaGCCAGTGTACTCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLLAVGS*PVYSKE
Trigger: TTCTTTTGAGTACACTGGCCATGATCCCACAGCCAA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAAATCTTTGTTGGCTGTaGGATCATGGCCAGTGTACT +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSANLCWL*DHGQCT
Trigger: AGTACACTGGCCATGATCCCACAGCCAACAAAGATT...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376718.8
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTTTGATGATGCTCTCTaGAATGTGGATGCAATCCAT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVFDDAL*NVDAIH
Trigger: ATGGATTGCATCCACATTCCAGAGAGCATCATCAAA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS-3UTR CCA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTAATGAAGTATTGAAATaGAAGGTCCTACTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSNEVLK*KVLLSC
Trigger: GCAAGAAAGTAGGACCTTCCATTTCAATACTTCATT...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAAATGAAGTATTGAAATaGAAGGTCCTACTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPNEVLK*KVLLSC
Trigger: GCAAGAAAGTAGGACCTTCCATTTCAATACTTCATT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAAAAATAAAGTTGACGTaGATTAGAAAGCCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSKIKLT*IRKPGF
Trigger: GAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTT...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
3UTR CAA 72 bp ACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTaGACACTATCTTCTGTGCAAATTTCTGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TELLPSNKLSHS*TLSSVQISVLS
Trigger: AGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGATCAGCATCTCTCTTCTaGGCAGTTAACTGGAAATAC +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRSASLF*AVNWKY
Trigger: GTATTTCCAGTTAACTGCTCAGAAGAGAGATGCTGA...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223609.10
ENST00000376717.6
CDS-3UTR TCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTATTGATTCTCCGAGGATaGGTGTCATTAAGATCCAGA +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLLILRG*VSLRSR
Trigger: TCTGGATCTTAATGACACTCATCCTCGGAGAATCAA...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTTCTGGAATAGACTCTaGCTCTTGGCCAGAATCTTT +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLFWNRL*LLARIF
Trigger: AAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCTTCCTGTGACAGGGTaGCCATGGAATTCATTTTAC +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLLPVTG*PWNSFY
Trigger: GTAAAATGAATTCCATGGTCACCCTGTCACAGGAAG...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTATTTCATTACTTCCTGTaGCAGGGTGACCATGGAATT +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLFHYFL*QGDHGI
Trigger: AATTCCATGGTCACCCTGTCACAGGAAGTAATGAAA...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTTTGCACCACTACACTaGACACTGGATTTTTCATTA +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVFAPLH*TLDFSL
Trigger: TAATGAAAAATCCAGTGTTCAGTGTAGTGGTGCAAA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGATCTATTTACTTGGGGTaGATGTACATGGTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRSIYLG*MYMVAF
Trigger: AAAAGCTACCATGTACATTCACCCCAAGTAAATAGA...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAAAGGGAACAAACTACTaGGGCATTGTGATAAGACGA +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLKGTNY*GIVIRR
Trigger: TCGTCTTATCACAATGCCTCAGTAGTTTGTTCCCTT...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTGGTAATATTGCTGTaGAATAGACAATTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRLVILL*NRQFSR
Trigger: CCTTGAGAATTGTCTATTTCACAGCAATATTACCAG...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCTTATGCTCTTTCCATaGTTCAGGGCTCTGGAAAAC +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLLMLFP*FRALEN
Trigger: GTTTTCCAGAGCCCTGAATCATGGAAAGAGCATAAG...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATCCTCATTTTTGTCTTaGATATCATTGCTACCCAGT +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSSSFLS*ISLLPS
Trigger: ACTGGGTAGCAATGATATTCAAGACAAAAATGAGGA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTTCCACTAAACCATTCTaGTCTTCTTTTGGTGGCTTA +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVSTKPF*SSFGGL
Trigger: TAAGCCACCAAAAGAAGATCAGAATGGTTTAGTGGA...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTGCTGTGCAAAAGTGTaGGTTGTCGGTTTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLCCAKV*VVGLFH
Trigger: ATGAAACAAACCGACAACTCACACTTTTGCACAGCA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAAGGAGCCTGGTAACATaGATGATGACATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIRSLVT*MMTCLY
Trigger: ATAAAGACATGTCATCATTCATGTTACCAGGCTCCT...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCCTGCTTGTCAAGATaGGATATAAGTGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSSCLSR*DISASD
Trigger: ATCAGAGGCACTTATATCTCATCTTGACAAGCAGGA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTAGAGCTGATTTTGCCTaGTTTAATGCAGATTTCCTG +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVRADFA*FNADFL
Trigger: CAGGAAATCTGCATTAAATCAGGCAAAATCAGCTCT...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAAGAGCTGATTTTGCCTaGTTTAATGCAGATTTCCTG +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIRADFA*FNADFL
Trigger: CAGGAAATCTGCATTAAATCAGGCAAAATCAGCTCT...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAATTAGATTGCTTTCCTaGTGTGTCCCTGAATGTTCA +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEIRLLS*CVPECS
Trigger: TGAACATTCAGGGACACATCAGGAAAGCAATCTAAT...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGATTAGATTGCTTTCCTaGTGTGTCCCTGAATGTTCA +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLIRLLS*CVPECS
Trigger: TGAACATTCAGGGACACATCAGGAAAGCAATCTAAT...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTATTAGATTCATTCAATaGATCCCAAGCTCTGGATTC +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCIRFIQ*IPSSGF
Trigger: GAATCCAGAGCTTGGGATTCATTGAATGAATCTAAT...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGTCACAGAATGGGTTTaGCTTATTCTCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLVTEWV*LILILC
Trigger: GCAGAGAATGAGAATAAGTCAAACCCATTCTGTGAC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTGGAGTTGGCTCTTGGTaGGTTACAAAAATGCTAGTT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSGVGSW*VTKMLV
Trigger: AACTAGCATTTTTGTAACTCACCAAGAGCCAACTCC...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATATTCTTCCTTGTATTCTaGTTTTATCTGCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIFFLVF*FYLLRL
Trigger: GAGCCTGAGCAGATAAAATCAGAATACAAGGAAGAA...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCATTCTTCCTTGTATTCTaGTTTTATCTGCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPFFLVF*FYLLRL
Trigger: GAGCCTGAGCAGATAAAATCAGAATACAAGGAAGAA...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTTCTTCCTTGTATTCTaGTTTTATCTGCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHFFLVF*FYLLRL
Trigger: GAGCCTGAGCAGATAAAATCAGAATACAAGGAAGAA...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTATCCATGTGTAGTGCATaGCGATCTTCATTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLSMCSA*RSSFFS
Trigger: AGAGAAGAATGAAGATCGTCATGCACTACACATGGA...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTGTTTCAACAGAACCATaGACCAGAAAAGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSVSTEP*TRKASS
Trigger: AGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAAC...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTCTACCAAATGATTTTTaGGTAGGCCACCTTGCACTT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSLPNDF*VGHLAL
Trigger: AAGTGCAAGGTGGCCTACTCAAAAATCATTTGGTAG...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAAGAGGCCTACAGACTTaGAATCTTGTTGGCATTTTA +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIRGLQT*NLVGIL
Trigger: TAAAATGCCAACAAGATTTCAAGTCTGTAGGCCTCT...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAGTACTCAAAAGAATCTaGTTCATCGGGGGTATCAAG +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLVLKRI*FIGGIK
Trigger: CTTGATACCCCCGATGAAGCAGATTCTTTTGAGTAC...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTTCATGTCAATGCGCTaGTCTTGTTCTCCAATGACC +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLFMSMR*SCSPMT
Trigger: GGTCATTGGAGAACAAGAGCAGCGCATTGACATGAA...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAAACTCAATCACCTGTaGAAAGATGTCGACTTTAAA +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANKLNHL*KDVDFK
Trigger: TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCACAGCAAATCTGACTaGACAGCTCCATGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLHSKSD*TAPCFL
Trigger: CAGAAAACATGGAGCTGTGCAGTCAGATTTGCTGTG...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGTGACCTGTGTCAGTTaGTTTTTGGGTCATATCTTC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLVTCVS*FLGHIF
Trigger: GAAGATATGACCCAAAAAGCAACTGACACAGGTCAC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAGGAACTCCACGCATCTaGAATATTTTTGGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEGTPRI*NIFGVN
Trigger: ATTGACTCCAAAAATATTGCAGATGCGTGGAGTTCC...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATTCTTACCATCTGTGTaGTCTGTCTTGAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAFLPSV*SVLSSF
Trigger: AAATGAACTCAAGACAGAGCACACAGATGGTAAGAA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCACTGTTTGCAATTAGCTaGCCACTTTTCTCATTCAAT +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSLFAIS*PLFSFN
Trigger: ATTGAATGAGAAAAGTGGGCAGCTAATTGCAAACAG...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTTCTGTTCACTCCAGTTaGCTTGGTTTTCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVSVHSS*LGFLLD
Trigger: ATCAAGAAGAAAACCAAGGCAACTGGAGTGAACAGA...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCACTGCTGTAATCTaGATTTCAGTCTCCGTTAAT +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQISTAVI*ISVSVN
Trigger: ATTAACGGAGACTGAAATGCAGATTACAGCAGTGGA...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTTACAAAAATGCTAGTTaGCACATTTTCAATCCTTGG +
Preference number: 4 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTYKNAS*HIFNPW
Trigger: CCAAGGATTGAAAATGTGGCAACTAGCATTTTTGTA...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTACAAAAATGCTAGTTaGCACATTTTCAATCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYYKNAS*HIFNPW
Trigger: CCAAGGATTGAAAATGTGGCAACTAGCATTTTTGTA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTATTCTGATATTTCCTTaGTGGCACCATTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLILIFP*WHHLVV
Trigger: GACCACCAAATGGTGCCAGCAAGGAAATATCAGAAT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATATTCTGATTTTATCTaGTCAGGCTCTTTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSYSDFI*SGSLVG
Trigger: TCCTACCAAAGAGCCTGAGCAGATAAAATCAGAATA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGATTCTAATTCAGCTATaGTTTCTCTTTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWILIQL*FLFLHR
Trigger: CCTGTGAAGAAAGAGAAAGCATAGCTGAATTAGAAT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAAGAAGACATTTTCTCTaGAGAGAGACCTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSERRHFL*RETFSF
Trigger: GAAAGAAAAGGTCTCTCTGCAGAGAAAATGTCTTCT...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCCTCCTTCTTGGGGTTaGACCATTCAAGTACACAAT +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLPPSWG*TIQVHN
Trigger: ATTGTGTACTTGAATGGTGCAACCCCAAGAAGGAGG...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGAAACCATTCTTAGCTTaGAGTGGTGAGCGAGACTTA +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEKPFLA*SGERDL
Trigger: TAAGTCTCGCTCACCACTGCAAGCTAAGAATGGTTT...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTAAACCATTCTTAGCTTaGAGTGGTGAGCGAGACTTA +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLKPFLA*SGERDL
Trigger: TAAGTCTCGCTCACCACTGCAAGCTAAGAATGGTTT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAAGAAAGATTGATATTTaGGGCTGTGAGCTTGATTCT +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSERKIDI*GCELDS
Trigger: AGAATCAAGCTCACAGCCCCAAATATCAATCTTTCT...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTAGAAAGATTGATATTTaGGGCTGTGAGCTTGATTCT +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCRKIDI*GCELDS
Trigger: AGAATCAAGCTCACAGCCCCAAATATCAATCTTTCT...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATATAGATCCTTCACTTTaGTCCAGAGAAAGATTGATA +
Preference number: 4 (lower is better)
Translates to: ATALKQTFSLLDTIFCANIDPSL*SRERLI
Trigger: TATCAATCTTTCTCTGGACCAAAGTGAAGGATCTAT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGATAGATCCTTCACTTTaGTCCAGAGAAAGATTGATA +
Preference number: 4 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWIDPSL*SRERLI
Trigger: TATCAATCTTTCTCTGGACCAAAGTGAAGGATCTAT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTATCTAAATACAAATTaGGGTGGAGTAGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALYLNTN*GGVGKD
Trigger: ATCCTTTCCTACTCCACCCCAATTTGTATTTAGATA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAAAGAAGGCTTCATTTTaGCAATTGCAACCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEKKASF*QLQPKQ
Trigger: CTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCTT...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGTGTAATAGGAGACACTaGAGACTAAGAATGGTTCCC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKECNRRH*RLRMVP
Trigger: GGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACA...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCATGTAATAGGAGACACTaGAGACTAAGAATGGTTCCC +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSACNRRH*RLRMVP
Trigger: GGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACA...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAGAAAAGAGAAAACGATaGAGGCTTATGGAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEEKRKR*RLMEER
Trigger: TCTTTCCTCCATAAGCCTCCATCGTTTTCTCTTTTC...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAGAAAAGAGAAAACGATaGAGGCTTATGGAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLEKRKR*RLMEER
Trigger: TCTTTCCTCCATAAGCCTCCATCGTTTTCTCTTTTC...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACGATGATGTCCTCTCTTaGAGGCAAGTTAGGAAATTT +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHDDVLS*RQVRKF
Trigger: AAATTTCCTAACTTGCCTCCAAGAGAGGACATCATC...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTAAGTCTTCTATCAGGTaGTTTGTTCCTTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSKSSIR*FVPWGD
Trigger: ATCTCCCCAAGGAACAAACCACCTGATAGAAGACTT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTGTCTTGCTGCTTGTTaGGTGCAAATTCCAGGTATT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSCLAAC*VQIPGI
Trigger: AATACCTGGAATTTGCACCCAACAAGCAGCAAGACA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTGATCTTCTTTTGGTaGCTTAGAATTAGTCCATGT +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRLIFFW*LRISPC
Trigger: ACATGGACTAATTCTAAGCCACCAAAAGAAGATCAG...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAACTGAGGTGGAATAATTaGTATCTAAGGGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQLRWNN*YLRGKA
Trigger: TGCCTTCCCCCTTAGATACCAATTATTCCACCTCAG...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTATGTGTGATGTTCACTaGGAGCACTGTCCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLMCDVH*EHCPWY
Trigger: ATACCAAGGACAGTGCTCCCAGTGAACATCACACAT...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTATGAGGTGTTTTTCATaGGTATCTTTTGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLMRCFS*VSFGCR
Trigger: CCTGCAGCCAAAAGATACCCATGAAAAACACCTCAT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTAACTATTTCTACTTaGCCATCAGTGGTAATTAGT +
Preference number: 4 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYVTIST*PSVVIS
Trigger: ACTAATTACCACTGATGGCCAAGTAGAAATAGTTAC...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTGCCTGTTTCAGGACTaGATAAAGAGGAAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHCLFQD*IKRKRN
Trigger: ATTCCTTTTCCTCTTTATCCAGTCCTGAAACAGGCA...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTTGGGAACGAAGCTTTaGGAGATATTTGCCATGCAA +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLLGTKL*EIFAMQ
Trigger: TTGCATGGCAAATATCTCCCAAAGCTTCGTTCCCAA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAATTATCTTCGTTCTTTaGGAACGAAGCTTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEIIFVL*ERSFGR
Trigger: TCTCCCAAAGCTTCGTTCCCAAAGAACGAAGATAAT...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCTAATTTTACAAGCTaGCTGAACTTGTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVSNFTS*LNLSAS
Trigger: AGATGCTGACAAGTTCAGCCAGCTTGTAAAATTAGA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTCTTCATCTATCTCTaGCTCAGTGAGACAAAGCTC +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSFFIYL*LSETKL
Trigger: GAGCTTTGTCTCACTGAGCCAGAGATAGATGAAGAA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGTTCTTCATCTATCTCTaGCTCAGTGAGACAAAGCTC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEFFIYL*LSETKL
Trigger: GAGCTTTGTCTCACTGAGCCAGAGATAGATGAAGAA...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAGATTCTTCTGTCAACTaGTTCCAAAATTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIDSSVN*FQNWCH
Trigger: ATGGCACCAATTTTGGAACCAGTTGACAGAAGAATC...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAAAGAACATCCAACTCTaGTCTTGTGCAGGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQKNIQL*SCAGLS
Trigger: TGAAAGCCCTGCACAAGACCAGAGTTGGATGTTCTT...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAAATTTCACAATGTGGTaGTCACCAACATTCATCAGG +
Preference number: 4 (lower is better)
Translates to: WKKVTSALSLSGRYVSTENFTMW*SPTFIR
Trigger: CCTGATGAATGTTGGTGACCACCACATTGTGAAATT...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGAACAAGATACTCGCTTaGAAGGATCAAGAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKENKILA*KDQEEK
Trigger: TTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTT...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTCTATTTACTTGGGGTaGATGTACATGGTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHSIYLG*MYMVAF
Trigger: AAAAGCTACCATGTACATTCACCCCAAGTAAATAGA...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTAATCAAGGAGCTTTaGGAAACAATGCTTTTGCCC +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSLIKEL*ETMLLP
Trigger: GGGCAAAAGCATTGTTTCTCAAAGCTCCTTGATTAA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTGAAATACAGAATCTaGGGCTCTCCTATCAATGGA +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSLKYRI*GSPING
Trigger: TCCATTGATAGGAGAGCCTCAGATTCTGTATTTCAA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTTGAAATACAGAATCTaGGGCTCTCCTATCAATGGA +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLLKYRI*GSPING
Trigger: TCCATTGATAGGAGAGCCTCAGATTCTGTATTTCAA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAAGGAGCCTGGTAACATaGATGATGACATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLRSLVT*MMTCLY
Trigger: ATAAAGACATGTCATCATTCATGTTACCAGGCTCCT...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGACTCAGTAGTTTCACCTaGATTTCTTTGACTCATGAG +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRLSSFT*ISLTHE
Trigger: CTCATGAGTCAAAGAAATTCAGGTGAAACTACTGAG...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAGAAATTCATCCCATCTaGAGTCTCAGTAGTTTCACC +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQEIHPI*SLSSFT
Trigger: GGTGAAACTACTGAGACTTCAGATGGGATGAATTTC...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTATTAGATTGCTTTCCTaGTGTGTCCCTGAATGTTCA +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSIRLLS*CVPECS
Trigger: TGAACATTCAGGGACACATCAGGAAAGCAATCTAAT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGGCATTTTGGTGTACTaGAGAATTTATCTCCAACAC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEGILVY*RIYLQH
Trigger: GTGTTGGAGATAAATTCTTCAGTACACCAAAATGCC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCATTCTTCCTTGTATTCTaGTTTTATCTGCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAFFLVF*FYLLRL
Trigger: GAGCCTGAGCAGATAAAATCAGAATACAAGGAAGAA...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAAGGGCTTTCAAAAGATaGTCTCGTATCGCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSARAFKR*SRIAFR
Trigger: TCTAAAAGCGATACGAGATCATCTTTTGAAAGCCCT...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTGTACTCAAAAGAATCTaGTTCATCGGGGGTATCAAG +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLVLKRI*FIGGIK
Trigger: CTTGATACCCCCGATGAAGCAGATTCTTTTGAGTAC...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTCTTCATTTTGGCAATTaGAACCTAAGCAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVLHFGN*NLSSDF
Trigger: AAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAG...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAAAACTCAATCACCTGTaGAAAGATGTCGACTTTAAA +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRKLNHL*KDVDFK
Trigger: TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTT...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGGAACTCCACGCATCTaGAATATTTTTGGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLGTPRI*NIFGVN
Trigger: ATTGACTCCAAAAATATTGCAGATGCGTGGAGTTCC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAAGTCATTGTTTTTCTTaGCCCAGATTTCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQSHCFS*PRFLEL
Trigger: CAGCTCCAGAAATCTGGGGCAAGAAAAACAATGACT...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATTCTTACCATCTGTGTaGTCTGTCTTGAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIFLPSV*SVLSSF
Trigger: AAATGAACTCAAGACAGAGCACACAGATGGTAAGAA...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATACTGTTTGCAATTAGCTaGCCACTTTTCTCATTCAAT +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQILFAIS*PLFSFN
Trigger: ATTGAATGAGAAAAGTGGGCAGCTAATTGCAAACAG...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTATCTGTTCACTCCAGTTaGCTTGGTTTTCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLSVHSS*LGFLLD
Trigger: ATCAAGAAGAAAACCAAGGCAACTGGAGTGAACAGA...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCCACTGCTGTAATCTaGATTTCAGTCTCCGTTAAT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSSTAVI*ISVSVN
Trigger: ATTAACGGAGACTGAAATGCAGATTACAGCAGTGGA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAATTCAGAATCGAGTTCTaGATTGGATGGGACAAACTC +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQFRIEF*IGWDKL
Trigger: GAGTTTGTCCCATCCAATGCAGAACTCGATTCTGAA...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTATATTCTGATTTTATCTaGTCAGGCTCTTTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLYSDFI*SGSLVG
Trigger: TCCTACCAAAGAGCCTGAGCAGATAAAATCAGAATA...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAATTCTAATTCAGCTATaGTTTCTCTTTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAILIQL*FLFLHR
Trigger: CCTGTGAAGAAAGAGAAAGCATAGCTGAATTAGAAT...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAAGAAAGATTGATATTTaGGGCTGTGAGCTTGATTCT +
Preference number: 4 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLRKIDI*GCELDS
Trigger: AGAATCAAGCTCACAGCCCCAAATATCAATCTTTCT...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTATAGATCCTTCACTTTaGTCCAGAGAAAGATTGATA +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCIDPSL*SRERLI
Trigger: TATCAATCTTTCTCTGGACCAAAGTGAAGGATCTAT...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAGATGTCAATTTCATCTaGACTGTCCAAGTTATCATC +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIDVNFI*TVQVII
Trigger: GATGATAACTTGGACAGTCCAGATGAAATTGACATC...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTTATCTAAATACAAATTaGGGTGGAGTAGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCYLNTN*GGVGKD
Trigger: ATCCTTTCCTACTCCACCCCAATTTGTATTTAGATA...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTAAGAAGGCTTCATTTTaGCAATTGCAACCTAAGCAG +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSKKASF*QLQPKQ
Trigger: CTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCTT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGAAAAGAGAAAACGATaGAGGCTTATGGAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLEKRKR*RLMEER
Trigger: TCTTTCCTCCATAAGCCTCCATCGTTTTCTCTTTTC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAAGAATCATTGAGATCTaGAGGGTTCTCTATGAAATT +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSRIIEI*RVLYEI
Trigger: AATTTCATAGAGAACCCTCCAGATCTCAATGATTCT...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAAGAATCATTGAGATCTaGAGGGTTCTCTATGAAATT +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRRIIEI*RVLYEI
Trigger: AATTTCATAGAGAACCCTCCAGATCTCAATGATTCT...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATACATTGTTTATCTCACTaGGTGAATTGTCCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIHCLSH*VNCPVV
Trigger: AACTACTGGACAATTCACCCAGTGAGATAAACAATG...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAACTTGCCCCAGATTTCTaGAGCTGCTTCATTGTTTAT +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQLAPDF*SCFIVY
Trigger: ATAAACAATGAAGCAGCTCCAGAAATCTGGGGCAAG...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAATTCTGATCTTCTTTTaGTGGCTTAGAATTAGTCCA +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRILIFF*WLRISP
Trigger: TGGACTAATTCTAAGCCACCAAAAGAAGATCAGAAT...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATGTAAGAGTCTGAGGTaGAATAATTGGTATCTAAGG +
Preference number: 4 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQICKSLR*NNWYLR
Trigger: CCTTAGATACCAATTATTCCACCTCAGACTCTTACA...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAATGAGGTGTTTTTCATaGGTATCTTTTGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQMRCFS*VSFGCR
Trigger: CCTGCAGCCAAAAGATACCCATGAAAAACACCTCAT...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTGTAACTATTTCTACTTaGCCATCAGTGGTAATTAGT +
Preference number: 4 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCVTIST*PSVVIS
Trigger: ACTAATTACCACTGATGGCCAAGTAGAAATAGTTAC...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATTATCTTCGTTCTTTaGGAACGAAGCTTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRIIFVL*ERSFGR
Trigger: TCTCCCAAAGCTTCGTTCCCAAAGAACGAAGATAAT...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATCTTCATCGATATTCTaGCCCATTACATCATATTCA +
Preference number: 4 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPASSSIF*PITSYS
Trigger: TGAATATGATGTAATGGGCCAGAATATCGATGAAGA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAATCTTCATCGATATTCTaGCCCATTACATCATATTCA +
Preference number: 4 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSESSSIF*PITSYS
Trigger: TGAATATGATGTAATGGGCCAGAATATCGATGAAGA...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGATTTGAGGCACATAATTaGCAAAATAGGAAAGTACAC +
Preference number: 4 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRFEAHN*QNRKVH
Trigger: GTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAA...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAAATCCAGCTAATCTATaGAAACAAATCCACTCATAC +
Preference number: 4 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSNPANL*KQIHSY
Trigger: GTATGAGTGGATTTGTTTCCATAGATTAGCTGGATT...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAAAAATAAAGTTGACGTaGATTAGAAAGCCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAKIKLT*IRKPGF
Trigger: GAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTT...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAATTAAATTTCACAATGTaGTGGTCACCAACATTCATC +
Preference number: 4 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKLNFTM*WSPTFI
Trigger: GATGAATGTTGGTGACCACCACATTGTGAAATTTAA...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCATCTATTTACTTGGGGTaGATGTACATGGTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSASIYLG*MYMVAF
Trigger: AAAAGCTACCATGTACATTCACCCCAAGTAAATAGA...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTTGAAATACAGAATCTaGGGCTCTCCTATCAATGGA +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLLKYRI*GSPING
Trigger: TCCATTGATAGGAGAGCCTCAGATTCTGTATTTCAA...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTCCTCATTTTTGTCTTaGATATCATTGCTACCCAGT +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLSSFLS*ISLLPS
Trigger: ACTGGGTAGCAATGATATTCAAGACAAAAATGAGGA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTAGGAGCCTGGTAACATaGATGATGACATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLRSLVT*MMTCLY
Trigger: ATAAAGACATGTCATCATTCATGTTACCAGGCTCCT...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAAGAGCTGATTTTGCCTaGTTTAATGCAGATTTCCTG +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQRADFA*FNADFL
Trigger: CAGGAAATCTGCATTAAATCAGGCAAAATCAGCTCT...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAACTCAGTAGTTTCACCTaGATTTCTTTGACTCATGAG +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQLSSFT*ISLTHE
Trigger: CTCATGAGTCAAAGAAATTCAGGTGAAACTACTGAG...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTGGCATTTTGGTGTACTaGAGAATTTATCTCCAACAC +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLGILVY*RIYLQH
Trigger: GTGTTGGAGATAAATTCTTCAGTACACCAAAATGCC...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR TCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAAGGGCTTTCAAAAGATaGTCTCGTATCGCTTTTAGA +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQRAFKR*SRIAFR
Trigger: TCTAAAAGCGATACGAGATCATCTTTTGAAAGCCCT...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAAAACTCAATCACCTGTaGAAAGATGTCGACTTTAAA +
Preference number: 4 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPKLNHL*KDVDFK
Trigger: TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTT...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTAAACTCAATCACCTGTaGAAAGATGTCGACTTTAAA +
Preference number: 4 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVKLNHL*KDVDFK
Trigger: TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTT...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTATATTCTGATTTTATCTaGTCAGGCTCTTTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLYSDFI*SGSLVG
Trigger: TCCTACCAAAGAGCCTGAGCAGATAAAATCAGAATA...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTAGAAAGATTGATATTTaGGGCTGTGAGCTTGATTCT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSRKIDI*GCELDS
Trigger: AGAATCAAGCTCACAGCCCCAAATATCAATCTTTCT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATATATCTAAATACAAATTaGGGTGGAGTAGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIYLNTN*GGVGKD
Trigger: ATCCTTTCCTACTCCACCCCAATTTGTATTTAGATA...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACGTAACTATTTCTACTTaGCCATCAGTGGTAATTAGT +
Preference number: 4 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHVTIST*PSVVIS
Trigger: ACTAATTACCACTGATGGCCAAGTAGAAATAGTTAC...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTATTATCTTCGTTCTTTaGGAACGAAGCTTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLIIFVL*ERSFGR
Trigger: TCTCCCAAAGCTTCGTTCCCAAAGAACGAAGATAAT...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAGATTCTTCTGTCAACTaGTTCCAAAATTGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQDSSVN*FQNWCH
Trigger: ATGGCACCAATTTTGGAACCAGTTGACAGAAGAATC...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGTCTTCATCGATATTCTaGCCCATTACATCATATTCA +
Preference number: 4 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLSSSIF*PITSYS
Trigger: TGAATATGATGTAATGGGCCAGAATATCGATGAAGA...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTTTGATGATGCTCTCTaGAATGTGGATGCAATCCAT +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLFDDAL*NVDAIH
Trigger: ATGGATTGCATCCACATTCCAGAGAGCATCATCAAA...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS-3UTR GCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTCTTCATTTTGGCAATTaGAACCTAAGCAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSLHFGN*NLSSDF
Trigger: AAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAG...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTACTCTGTCTACCTATCTaGTTAGGGATTATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLLCLPI*LGIIFL
Trigger: TAGAAAAATAATCCCTAAGCAGATAGGTAGACAGAG...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTTCTTACCATCTGTGTaGTCTGTCTTGAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLFLPSV*SVLSSF
Trigger: AAATGAACTCAAGACAGAGCACACAGATGGTAAGAA...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAATAGATCCTTCACTTTaGTCCAGAGAAAGATTGATA +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAIDPSL*SRERLI
Trigger: TATCAATCTTTCTCTGGACCAAAGTGAAGGATCTAT...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTATCTAAATACAAATTaGGGTGGAGTAGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSYLNTN*GGVGKD
Trigger: ATCCTTTCCTACTCCACCCCAATTTGTATTTAGATA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCATCCAGGTTGTGAGTaGTATTTATTTCAGAACTGT +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLHPGCE*YLFQNC
Trigger: ACAGTTCTGAAATAAATACCACTCACAACCTGGATG...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTTGAGGCACATAATTaGCAAAATAGGAAAGTACAC +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSFEAHN*QNRKVH
Trigger: GTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTAATGAAGTATTGAAATaGAAGGTCCTACTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLNEVLK*KVLLSC
Trigger: GCAAGAAAGTAGGACCTTCCATTTCAATACTTCATT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTAATCCAGCTAATCTATaGAAACAAATCCACTCATAC +
Preference number: 4 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSNPANL*KQIHSY
Trigger: GTATGAGTGGATTTGTTTCCATAGATTAGCTGGATT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAAATCCAGCTAATCTATaGAAACAAATCCACTCATAC +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSANPANL*KQIHSY
Trigger: GTATGAGTGGATTTGTTTCCATAGATTAGCTGGATT...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGTTAAATTTCACAATGTaGTGGTCACCAACATTCATC +
Preference number: 4 (lower is better)
Translates to: RTYNSTRYSLERIKRRKELNFTM*WSPTFI
Trigger: GATGAATGTTGGTGACCACCACATTGTGAAATTTAA...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCATTAAATTTCACAATGTaGTGGTCACCAACATTCATC +
Preference number: 4 (lower is better)
Translates to: STKTSLCGCVSVPLYLSALNFTM*WSPTFI
Trigger: GATGAATGTTGGTGACCACCACATTGTGAAATTTAA...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR GCA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCTCTGTCTACCTATCTaGTTAGGGATTATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLLCLPI*LGIIFL
Trigger: TAGAAAAATAATCCCTAAGCAGATAGGTAGACAGAG...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CCA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAATTCTGATCTTCTTTTaGTGGCTTAGAATTAGTCCA +
Preference number: 4 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQILIFF*WLRISP
Trigger: TGGACTAATTCTAAGCCACCAAAAGAAGATCAGAAT...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp GTTCTCCAGACCATGCATGTTCCTCCGCCACCGCCCCTTCAGGGATaGGGCTGTAGGAGTCAAGCCCTGGGAGAAGGGTGTGGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: VLQTMHVPPPPPLQG*GCRSQALGEGCGEA
Trigger: GGCCTCACCACACCCTTCTCCCAGGGCTTGACTCCTACAGCCCCATCCCTGAAGGGGCGGTGGCGGAGGAACATGCATGGTCTGGAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGGTCCTCCAAAGCCGGTaGTCCTCCCGTTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRVLQSR*SSRSSS
Trigger: CGAAGAGGAACGGGAGGACAACCGGCTTTGGAGGAC...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp GGGGACCCTCACCCAAGCCGAGTTCAGAGAACGGCTCCACAGTCTTaGCAGACCACCCAGGCCCTGAGTCCCTGGCATCCAGTGATGGAT +
Preference number: 5 (lower is better)
Translates to: GDPHPSRVQRTAPQS*QTTQALSPWHPVMD
Trigger: ATCCATCACTGGATGCCAGGGACTCAGGGCCTGGGTGGTCTGGCAAGACTGTGGAGCCGTTCTCTGAACTCGGCTTGGGTGAGGGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTCTCGGAACTCAACGTaGGCATCGCTCTGCTCAACC +
Preference number: 5 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRSRNST*ASLCST
Trigger: GGTTGAGCAGAGCGATGCCAACGTTGAGTTCCGAGA...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTCTGGCATCCTCCTTCTaGGGGTTGCACCATTCAAGT +
Preference number: 5 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGLASSF*GLHHSS
Trigger: ACTTGAATGGTGCAACCCCAAGAAGGAGGATGCCAG...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp TCCCACGGGGCTGTCGTCACTGAGGAAAACAGAGCTCTCCTTGGATaGGCGGCTGCTCCTAATGGTAGCCAGTCCGCTGTCTGGGCTAAC +
Preference number: 5 (lower is better)
Translates to: SHGAVVTEENRALLG*AAAPNGSQSAVWAN
Trigger: GTTAGCCCAGACAGCGGACTGGCTACCATTAGGAGCAGCCGCTCATCCAAGGAGAGCTCTGTTTTCCTCAGTGACGACAGCCCCGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTGTCAATGCGCTGCTCTaGTTCTCCAATGACCACTGT +
Preference number: 5 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGVNALL*FSNDHC
Trigger: ACAGTGGTCATTGGAGAACAAGAGCAGCGCATTGAC...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTTCTGGACACCTCCTGTaGATGACTTCCTTGACAACG +
Preference number: 5 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGSGHLL*MTSLTT
Trigger: CGTTGTCAAGGAAGTCATCAACAGGAGGTGTCCAGA...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTCCACAAGGCTATCTTaGCCAGCCCCTGACAAAAGT +
Preference number: 5 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRSTRLS*PAPDKS
Trigger: ACTTTTGTCAGGGGCTGGCAAAGATAGCCTTGTGGA...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTCGTCACCTTCTGGAGTaGGCTCTTGGTGAGTTACAA +
Preference number: 5 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGRHLLE*ALGELQ
Trigger: TTGTAACTCACCAAGAGCCAACTCCAGAAGGTGACG...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp TGCCCAGAAGCCATGGGTGCTGGGTCAAAATTGAAGAGGTCGAAGTaGTCACCGTGTTCTCCAGACCATGCATGTTCCTCCGCCACCGCC +
Preference number: 5 (lower is better)
Translates to: CPEAMGAGSKLKRSK*SPCSPDHACSSATA
Trigger: GGCGGTGGCGGAGGAACATGCATGGTCTGGAGAACACGGTGAGCACTTCGACCTCTTCAATTTTGACCCAGCACCCATGGCTTCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp AGAACGGCTCCACAGTCTTGCCAGACCACCCAGGCCCTGAGTCCCTaGCATCCAGTGATGGATCACCAACCTCACTATGGCCCAAGAACA +
Preference number: 5 (lower is better)
Translates to: RTAPQSCQTTQALSP*HPVMDHQPHYGPRT
Trigger: TGTTCTTGGGCCATAGTGAGGTTGGTGATCCATCACTGGATGCCAGGGACTCAGGGCCTGGGTGGTCTGGCAAGACTGTGGAGCCGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTTTCATGGGTATCTTTaGGCTGCAGGTTATCTGCGG +
Preference number: 5 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRFHGYL*AAGYLR
Trigger: CCGCAGATAACCTGCAGCCAAAAGATACCCATGAAA...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp AATCGGGTTTCCGGCTCGGAACCTTCAGCCATGTATCCTTCTGTTTaGCCATCACTGGGGATTGCCGCACCCCCACTGCAGTCATCCCAG +
Preference number: 5 (lower is better)
Translates to: NRVSGSEPSAMYPSV*PSLGIAAPPLQSSQ
Trigger: CTGGGATGACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAGAAGGATACATGGCTGAAGGTTCCGAGCCGGAAACCCGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp GTCCTTCAGGCCCAGCGGGGAGCTGTCCTTCTGACAGGTCACTGTTaGGGAAGAAGTCATCTGCTGGGGAGTAGTCTGCAGAATGAGAAG +
Preference number: 5 (lower is better)
Translates to: VLQAQRGAVLLTGHC*GRSHLLGSSLQNEK
Trigger: CTTCTCATTCTGCAGACTACTCCCCAGCAGATGACTTCTTCCCCAACAGTGACCTGTCAGAAGGACAGCTCCCCGCTGGGCCTGAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp TTCTTTACCAAATGCACTCCAGGCTGGGAATGGCGCCACAGCTGCTaGTTCACCATCATCTGTAGGATTTCCCCAGGGCTCGGGCATGGC +
Preference number: 5 (lower is better)
Translates to: FFTKCTPGWEWRHSC*FTIICRISPGLGHG
Trigger: GCCATGCCCGAGCCCTGGGGAAATCCTACAGATGATGGTGAACCAGCAGCTGTGGCGCCATTCCCAGCCTGGAGTGCATTTGGTAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp ACAAGTCAGGCGCGGCAGAGGCCAGCTGCCCACCCTCTTGAAAGTTaGCATGTAAAATATCTGGCACAAAGGTACCTCGGGAGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: TSQARQRPAAHPLES*HVKYLAQRYLGSPH
Trigger: GTGAGGACTCCCGAGGTACCTTTGTGCCAGATATTTTACATGGCAACTTTCAAGAGGGTGGGCAGCTGGCCTCTGCCGCGCCTGACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp CCGGCTCGGAACCTTCAGCCATGTATCCTTCTGTTTGACCATCACTaGGGATTGCCGCACCCCCACTGCAGTCATCCCAGTCCAAATCAT +
Preference number: 5 (lower is better)
Translates to: PARNLQPCILLFDHH*GLPHPHCSHPSPNH
Trigger: ATGATTTGGACTGGGATGACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAGAAGGATACATGGCTGAAGGTTCCGAGCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTGCAGCCCTGTTTCTTaGGAACCTACATACAATTCT +
Preference number: 5 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRCSPVS*EPTYNS
Trigger: AGAATTGTATGTAGGTTCCAAAGAAACAGGGCTGCA...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTTGCAGCCCTGTTTCTTaGGAACCTACATACAATTCT +
Preference number: 5 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGCSPVS*EPTYNS
Trigger: AGAATTGTATGTAGGTTCCAAAGAAACAGGGCTGCA...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp TCTATCCACAAGTCAGGCGCGGCAGAGGCCAGCTGCCCACCCTCTTaGAAGTTGCCATGTAAAATATCTGGCACAAAGGTACCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: SIHKSGAAEASCPPS*KLPCKISGTKVPRE
Trigger: CTCCCGAGGTACCTTTGTGCCAGATATTTTACATGGCAACTTTCAAGAGGGTGGGCAGCTGGCCTCTGCCGCGCCTGACTTGTGGATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp GGATTTCCCCAGGGCTCGGGCATGGCTGTGGGAGAGCGACCAGAATaGCACAAAGAAGCAAAGTCTTCTATCAGGTGGTTTGTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: GFPQGSGMAVGERPE*HKEAKSSIRWFVPW
Trigger: CCAAGGAACAAACCACCTGATAGAAGACTTTGCTTCTTTGTGGCATTCTGGTCGCTCTCCCACAGCCATGCCCGAGCCCTGGGGAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp ATCTTCTTTACCAAATGCACTCCAGGCTGGGAATGGCGCCACAGCTaGTGGTTCACCATCATCTGTAGGATTTCCCCAGGGCTCGGGCAT +
Preference number: 5 (lower is better)
Translates to: IFFTKCTPGWEWRHS*WFTIICRISPGLGH
Trigger: ATGCCCGAGCCCTGGGGAAATCCTACAGATGATGGTGAACCAGCAGCTGTGGCGCCATTCCCAGCCTGGAGTGCATTTGGTAAAGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCGTCGTGGCTAGGGGTTaGGAACCCGGGTACTCGGAG +
Preference number: 5 (lower is better)
Translates to: MRLGWNRSHPFIFISASFVVARG*EPGYSE
Trigger: CTCCGAGTACCCGGGTTCCAAACCCCTAGCCACGAC...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGACCATCACTGGGGATaGCCGCACCCCCACTGCAGT +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGDHHWG*PHPHCS
Trigger: ACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTC...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGGCAAGAGAGCTGATTTaGCCTGATTTAATGCAGATT +
Preference number: 5 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRARELI*PDLMQI
Trigger: AATCTGCATTAAATCAGGCAAAATCAGCTCTCTTGC...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGGAATGTTCAGAATATTaGCCTGTTTCAGGACTGGAT +
Preference number: 5 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRECSEY*PVSGLD
Trigger: ATCCAGTCCTGAAACAGGCAAATATTCTGAACATTC...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGTTCCCGTGGATGTGTaGAGACCTGAGGCATCGCTG +
Preference number: 5 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSVPVDV*RPEASL
Trigger: CAGCGATGCCTCAGGTCTCAACACATCCACGGGAAC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp GCCTCTGATTCACTGGTTCCAGAGGCTGCTGGCGCATCTGGGGAATaGGTGTCTTTAACATTTGCTGAATGGCTGGGGATTTCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: ASDSLVPEAAGASGE*VSLTFAEWLGISGG
Trigger: GCCTCCTGAAATCCCCAGCCATTCAGCAAATGTTAAAGACACTCATTCCCCAGATGCGCCAGCAGCCTCTGGAACCAGTGAATCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp GTCTGCAGAATGAGAAGATTGCTGGGACTGCCCAGAAGCCATGGGTaGTGGGTCAAAATTGAAGAGGTCGAAGTGCTCACCGTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: VCRMRRLLGLPRSHG*WVKIEEVEVLTVFS
Trigger: GGAGAACACGGTGAGCACTTCGACCTCTTCAATTTTGACCCAGCACCCATGGCTTCTGGGCAGTCCCAGCAATCTTCTCATTCTGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp CTTGGTATGCTCATCAGAGGCAGGGAGCTCCCAATCTACCTGATTTaGTTCCTGATACTCCAAGCCCCAGGGTTCCAGCTGTCTCACTGT +
Preference number: 5 (lower is better)
Translates to: LGMLIRGRELPIYLI*FLILQAPGFQLSHC
Trigger: ACAGTGAGACAGCTGGAACCCTGGGGCTTGGAGTATCAGGAAGCAAATCAGGTAGATTGGGAGCTCCCTGCCTCTGATGAGCATACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp TCCTCTAGTGCCAAAGATTCTAGAGGCTTCATTTCTTCCAGAATCTaGAGCTGGGGACCCTCACCCAAGCCGAGTTCAGAGAACGGCTCC +
Preference number: 5 (lower is better)
Translates to: SSSAKDSRGFISSRI*SWGPSPKPSSENGS
Trigger: GGAGCCGTTCTCTGAACTCGGCTTGGGTGAGGGTCCCCAGCTGCAGATTCTGGAAGAAATGAAGCCTCTAGAATCTTTGGCACTAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp GATTCGCGTCGCCCCTTCTGTAGCCTGCTGCTGTGCGGCACAGCTTaGCCCAGATACTTTAATTATTTCTGCTCCTTCGGATTAGAAGGG +
Preference number: 5 (lower is better)
Translates to: DSRRPFCSLLLCGTA*PRYFNYFCSFGLEG
Trigger: CCCTTCTAATCCGAAGGAGCAGAAATAATTAAAGTATCTGGGGCAAGCTGTGCCGCACAGCAGCAGGCTACAGAAGGGGCGACGCGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489555.1
CDS GCA 90 bp AGCGTTTGCTTCGATTCGCGTCGCCCCTTCTGTAGCCTGCTGCTGTaGGGCACAGCTTGCCCCAGATACTTTAATTATTTCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SVCFDSRRPFCSLLL*GTACPRYFNYFCSF
Trigger: GAAGGAGCAGAAATAATTAAAGTATCTGGGGCAAGCTGTGCCGCACAGCAGCAGGCTACAGAAGGGGCGACGCGAATCGAAGCAAACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489555.1
CDS GCA 90 bp CTCCAAGCGTTTGCTTCGATTCGCGTCGCCCCTTCTGTAGCCTGCTaGTGTGCGGCACAGCTTGCCCCAGATACTTTAATTATTTCTGCT +
Preference number: 5 (lower is better)
Translates to: LQAFASIRVAPSVAC*CAAQLAPDTLIISA
Trigger: AGCAGAAATAATTAAAGTATCTGGGGCAAGCTGTGCCGCACAGCAGCAGGCTACAGAAGGGGCGACGCGAATCGAAGCAAACGCTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489555.1
CDS CCA 90 bp GGCCCTGAGTCCCTGGCATCCAGTGATGGATCACCAACCTCACTATaGCCCAAGAACATCCAACTCTGGTCTTGTGCAGGGCTTTCAAAA +
Preference number: 5 (lower is better)
Translates to: GPESLASSDGSPTSL*PKNIQLWSCAGLSK
Trigger: TTTTGAAAGCCCTGCACAAGACCAGAGTTGGATGTTCTTGGGCCATAGTGAGGTTGGTGATCCATCACTGGATGCCAGGGACTCAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGTTCAAGTTCATCCACATaGATGTCAATTTCATCTGGA +
Preference number: 5 (lower is better)
Translates to: GLNCVCVGTCGRTGGDRGSSSST*MSISSG
Trigger: TCCAGATGAAATTGACATCAATGTGGATGAACTTGA...ACCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGTCCTCCAAAGCCGGTaGTCCTCCCGTTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGVLQSR*SSRSSS
Trigger: CGAAGAGGAACGGGAGGACAACCGGCTTTGGAGGAC...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTCTGGGAGCACTGTCCTaGGTATGCTCATCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSLGALS*VCSSEA
Trigger: TGCCTCTGATGAGCATACCAAGGACAGTGCTCCCAG...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGCTGAACTGCGTGTGTGTGGGCACGTGCGGAAGGACGGGAGGAGACAGAGGAGTACAAAAACAAGTTaGTGTGGCTGTGTTTCAGTA +
Preference number: 5 (lower is better)
Translates to: RAELRVCGHVRKDGRRQRSTKTS*CGCVSV
Trigger: TACTGAAACACAGCCACACAAACTTGTTTTTGTACT...CCTCTGTCTCCTCCCGTCCTTCCGCACGTGCCCACACACACGCAGTTCAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp AAGTCGAGACTGTCAGGGGCCGTCTGCCGGGAGTTGGTGCTGCTGTaGAAAAGTGTGAGTTGTCGGTTTGTTTCATTGTACAGTTGCATC +
Preference number: 5 (lower is better)
Translates to: KSRLSGAVCRELVLL*KSVSCRFVSLYSCI
Trigger: GATGCAACTGTACAATGAAACAAACCGACAACTCACACTTTTGCACAGCAGCACCAACTCCCGGCAGACGGCCCCTGACAGTCTCGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp GGAACCTTCAGCCATGTATCCTTCTGTTTGACCATCACTGGGGATTaGCGCACCCCCACTGCAGTCATCCCAGTCCAAATCATTGTCCAT +
Preference number: 5 (lower is better)
Translates to: GTFSHVSFCLTITGD*RTPTAVIPVQIIVH
Trigger: ATGGACAATGATTTGGACTGGGATGACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAGAAGGATACATGGCTGAAGGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp TGGGTGTGGAAAATACCCTGGATTCTCAAGCCTAGTCGCCAAGGATaGTGCATCACTTTGCAGGGTTTCCCTCTCTGTGTCCTGCTTGTC +
Preference number: 5 (lower is better)
Translates to: WVWKIPWILKPSRQG*CITLQGFPLCVLLV
Trigger: GACAAGCAGGACACAGAGAGGGAAACCCTGCAAAGTGATGCAGCATCCTTGGCGACTAGGCTTGAGAATCCAGGGTATTTTCCACACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp GGCAGGTTCTGTGAGATAAGACAAATCAAAGGGAGGTGTGTACGGTaGCAGCGACTGCTTCAGAGAATCTTCCTCCAAAGGAGGGTCACC +
Preference number: 5 (lower is better)
Translates to: GRFCEIRQIKGRCVR*QRLLQRIFLQRRVT
Trigger: GGTGACCCTCCTTTGGAGGAAGATTCTCTGAAGCAGTCGCTGGCACCGTACACACCTCCCTTTGATTTGTCTTATCTCACAGAACCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp TCCCTCACTTCTTCGATCAGGAAGTGCAGAAAGCACTATCTCTGCTaGTCTGCATCCCAGAGATTCATCCTCTGGAGACCCAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SLTSSIRKCRKHYLC*SASQRFILWRPSFL
Trigger: GAGGAAGCTGGGTCTCCAGAGGATGAATCTCTGGGATGCAGAGCAGCAGAGATAGTGCTTTCTGCACTTCCTGATCGAAGAAGTGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp TGCAGAATGAGAAGATTGCTGGGACTGCCCAGAAGCCATGGGTGCTaGGTCAAAATTGAAGAGGTCGAAGTGCTCACCGTGTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: CRMRRLLGLPRSHGC*VKIEEVEVLTVFSR
Trigger: TCTGGAGAACACGGTGAGCACTTCGACCTCTTCAATTTTGACCCAGCACCCATGGCTTCTGGGCAGTCCCAGCAATCTTCTCATTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp TCCCAAGCTCTGGATTCATCCTCAGCAACGTGGCAGTTGGCCACCTaGATCTCTTCCTCTATTGACTCTTCACCACCGACACTGTCATCA +
Preference number: 5 (lower is better)
Translates to: SQALDSSSATWQLAT*ISSSIDSSPPTLSS
Trigger: TGATGACAGTGTCGGTGGTGAAGAGTCAATAGAGGAAGAGATCCAGGTGGCCAACTGCCACGTTGCTGAGGATGAATCCAGAGCTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp ATTTTCCTCTGCGTGAGTAAAGGCTGTGTCCGGATGATCACAGACTaGCAGCATGGTGTCCTGACACTGCTCTTGGGTAGGTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: IFLCVSKGCVRMITD*QHGVLTLLLGRCFR
Trigger: CCTGAAACACCTACCCAAGAGCAGTGTCAGGACACCATGCTGCCAGTCTGTGATCATCCGGACACAGCCTTTACTCACGCAGAGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp ACCTCGGGAGTCCTCACTTGGGGTAGAGCCATCCCATTCAGAGCCTaGCTTCATTATCAGTTGGGTGGGAGAACTGACAGCAGGAAAATT +
Preference number: 5 (lower is better)
Translates to: TSGVLTWGRAIPFRA*LHYQLGGRTDSRKI
Trigger: AATTTTCCTGCTGTCAGTTCTCCCACCCAACTGATAATGAAGCCAGGCTCTGAATGGGATGGCTCTACCCCAAGTGAGGACTCCCGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp AGCACAGCCAGCTGGGATCCAGGCAGTCTGTTTTTGGTCTCAGCCTaGTTTCCCTCACTTCTTCGATCAGGAAGTGCAGAAAGCACTATC +
Preference number: 5 (lower is better)
Translates to: STASWDPGSLFLVSA*FPSLLRSGSAESTI
Trigger: GATAGTGCTTTCTGCACTTCCTGATCGAAGAAGTGAGGGAAACCAGGCTGAGACCAAAAACAGACTGCCTGGATCCCAGCTGGCTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGTCCTCCAAAGCCGGTaGTCCTCCCGTTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSVLQSR*SSRSSS
Trigger: CGAAGAGGAACGGGAGGACAACCGGCTTTGGAGGAC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAGAGGATGTCCGGCTATaGGAGACCATCTCTGGACAC +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTEEDVRL*ETISGH
Trigger: GTGTCCAGAGATGGTCTCCAATAGCCGGACATCCTC...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGTCCTGACACTGCTCTaGGGTAGGTGTTTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSVLTLL*GRCFRS
Trigger: ACTCCTGAAACACCTACCCAAGAGCAGTGTCAGGAC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGTTCCCGTGGATGTGTaGAGACCTGAGGCATCGCTG +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGVPVDV*RPEASL
Trigger: CAGCGATGCCTCAGGTCTCAACACATCCACGGGAAC...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTCTGGCATCCTCCTTCTaGGGGTTGCACCATTCAAGT +
Preference number: 5 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSLASSF*GLHHSS
Trigger: ACTTGAATGGTGCAACCCCAAGAAGGAGGATGCCAG...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp GTTGTCCTCCCGTTCCTCTTCGGCCGTATATTCTGGAATAGACTCTaGCTCTTGGCCAGAATCTTTGTTGGCTGTGGGATCTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: VVLPFLFGRIFWNRL*LLARIFVGCGIFMA
Trigger: GGCCATGAAGATCCCACAGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAATATACGGCCGAAGAGGAACGGGAGGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000428286.5
ENST00000466266.6
ENST00000488346.5
CDS TCA 90 bp GCATCACTTTGCAGGGTTTCCCTCTCTGTGTCCTGCTTGTCAAGATaGGATATAAGTGCCTCTGATTCACTGGTTCCAGAGGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: ASLCRVSLSVSCLSR*DISASDSLVPEAAG
Trigger: GCCAGCAGCCTCTGGAACCAGTGAATCAGAGGCACTTATATCTCATCTTGACAAGCAGGACACAGAGAGGGAAACCCTGCAAAGTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp CAGAGAAGACAGTTCCTGGTCACTCTGCCCTTTTTCAGAAATCCCTaGGGCATTCTCCACACCAGAGGCGATCACCTCCTCTTCATCAAG +
Preference number: 5 (lower is better)
Translates to: QRRQFLVTLPFFRNP*GILHTRGDHLLFIK
Trigger: CTTGATGAAGAGGAGGTGATCGCCTCTGGTGTGGAGAATGCCTCAGGGATTTCTGAAAAAGGGCAGAGTGACCAGGAACTGTCTTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp CCCGTCCAGGCTCATAAATGGGTTCTTCATCTATCTCTGGCTCAGTaGGACAAAGCTCACTGGATTCCACTTCAGGTCCCATGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: PVQAHKWVLHLSLAQ*DKAHWIPLQVPCKH
Trigger: GTGCTTGCATGGGACCTGAAGTGGAATCCAGTGAGCTTTGTCTCACTGAGCCAGAGATAGATGAAGAACCCATTTATGAGCCTGGACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp GTTGTCCTCCCGTTCCTCTTCGGCCGTATATTCTGGAATAGACTCTaGCTCTTGGCCAGAATCTTTGTTGGCTGTGGGATCATGGCCAGT +
Preference number: 5 (lower is better)
Translates to: VVLPFLFGRIFWNRL*LLARIFVGCGIMAS
Trigger: ACTGGCCATGATCCCACAGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAATATACGGCCGAAGAGGAACGGGAGGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS GCA 90 bp CATTGTACAGTTGCATCATGCTGGGGTCGTCGTAACTGGACTGGCTaGTTTCCCCGACGTCATCCTCCATGGAGATATTCTTACCATCTG +
Preference number: 5 (lower is better)
Translates to: HCTVASCWGRRNWTG*FPRRHPPWRYSYHL
Trigger: CAGATGGTAAGAATATCTCCATGGAGGATGACGTCGGGGAAAGCAGCCAGTCCAGTTACGACGACCCCAGCATGATGCAACTGTACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp GTGTGGAAAATACCCTGGATTCTCAAGCCTAGTCGCCAAGGATGCTaGATCACTTTGCAGGGTTTCCCTCTCTGTGTCCTGCTTGTCAAG +
Preference number: 5 (lower is better)
Translates to: VWKIPWILKPSRQGC*ITLQGFPLCVLLVK
Trigger: CTTGACAAGCAGGACACAGAGAGGGAAACCCTGCAAAGTGATGCAGCATCCTTGGCGACTAGGCTTGAGAATCCAGGGTATTTTCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp GTTTCCCTCACTTCTTCGATCAGGAAGTGCAGAAAGCACTATCTCTaGTGCTCTGCATCCCAGAGATTCATCCTCTGGAGACCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: VSLTSSIRKCRKHYL*CSASQRFILWRPSF
Trigger: GAAGCTGGGTCTCCAGAGGATGAATCTCTGGGATGCAGAGCAGCAGAGATAGTGCTTTCTGCACTTCCTGATCGAAGAAGTGAGGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp AGCCAGAGTTCCTGGATTGAAAGGCGTCTCTATTCACCAGCCATGTaGCCTTGGGGAAAAGCTCAATCCTGCTCATCTCAAGGTTCATGC +
Preference number: 5 (lower is better)
Translates to: SQSSWIERRLYSPAM*PWGKAQSCSSQGSC
Trigger: GCATGAACCTTGAGATGAGCAGGATTGAGCTTTTCCCCAAGGGCACATGGCTGGTGAATAGAGACGCCTTTCAATCCAGGAACTCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376713.3
CDS CCA 90 bp TCCATCGCCATGACCTTTCCATGGATCTGGGTGTGGAAAATACCCTaGATTCTCAAGCCTAGTCGCCAAGGATGCTGCATCACTTTGCAG +
Preference number: 5 (lower is better)
Translates to: SIAMTFPWIWVWKIP*ILKPSRQGCCITLQ
Trigger: CTGCAAAGTGATGCAGCATCCTTGGCGACTAGGCTTGAGAATCCAGGGTATTTTCCACACCCAGATCCATGGAAAGGTCATGGCGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp AGAGGCGGGCTGAGAGGAGCCCTTTATGTCTGCTTGATAGCCAATTaGAGGCAGCACAGTTGCGTTTTCAGAATCGAGTTCTGCATTGGA +
Preference number: 5 (lower is better)
Translates to: RGGLRGALYVCLIAN*RQHSCVFRIEFCIG
Trigger: TCCAATGCAGAACTCGATTCTGAAAACGCAACTGTGCTGCCTCCAATTGGCTATCAAGCAGACATAAAGGGCTCCTCTCAGCCCGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp AGAAAGCACTATCTCTGCTGCTCTGCATCCCAGAGATTCATCCTCTaGAGACCCAGCTTCCTCTATTGTTTCAGCACTCTGGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: RKHYLCCSASQRFIL*RPSFLYCFSTLGRF
Trigger: GAACCTGCCCAGAGTGCTGAAACAATAGAGGAAGCTGGGTCTCCAGAGGATGAATCTCTGGGATGCAGAGCAGCAGAGATAGTGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGTCTCCTGTAGGACGTaGATGATGTCCTCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSVSCRT*MMSSLG
Trigger: TCCAAGAGAGGACATCATCAACGTCCTACAGGAGAC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTCTGCCACGGCTTCTGTaGAGGATGTCCGGCTATTGG +
Preference number: 5 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSALPRLL*RMSGYW
Trigger: CCAATAGCCGGACATCCTCAACAGAAGCCGTGGCAG...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTGGTGCTGGGTCAAAATaGAAGAGGTCGAAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSGAGSK*KRSKCS
Trigger: TGAGCACTTCGACCTCTTCAATTTTGACCCAGCACC...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAAGGCAAACCCACTTTTaGCCATGGCCCACTCATTCG +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTERQTHF*PWPTHS
Trigger: CGAATGAGTGGGCCATGGCAAAAAGTGGGTTTGCCT...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTACAAGCTGGCTGAACTaGTCAGCATCTGGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGTSWLN*SASGSG
Trigger: GCCAGACCCAGATGCTGACAAGTTCAGCCAGCTTGT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACCTTGCTGGCACCATTaGGTGGTCCTATGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: AITRALYEQLYALRFAPLPCWHH*VVLCLH
Trigger: GTGGAGACATAGGACCACCAAATGGTGCCAGCAAGG...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp TCTGGACACCTCCTGTTGATGACTTCCTTGACAACGAGAACCACCTaGTCACAAGTCACTGAAGGGTCCTCTTGTTGGTACACCAGGATC +
Preference number: 5 (lower is better)
Translates to: SGHLLLMTSLTTRTT*SQVTEGSSCWYTRI
Trigger: GATCCTGGTGTACCAACAAGAGGACCCTTCAGTGACTTGTGATCAGGTGGTTCTCGTTGTCAAGGAAGTCATCAACAGGAGGTGTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp GCCAGTCCGCTGTCTGGGCTAACAAGGTCTACATTGGCATCCACCTaGGCCTGGTTAGAATCATTGAGATCTGGAGGGTTCTCTATGAAA +
Preference number: 5 (lower is better)
Translates to: ASPLSGLTRSTLAST*AWLESLRSGGFSMK
Trigger: TTTCATAGAGAACCCTCCAGATCTCAATGATTCTAACCAGGCTCAGGTGGATGCCAATGTAGACCTTGTTAGCCCAGACAGCGGACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp ATCACCCTGAACTGGTACTCCCCAGGGACTGGCATTTTGGTGTACTaGAGAATTTATCTCCAACACACCACTGGAGTCAGACAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: ITLNWYSPGTGILVY*RIYLQHTTGVRQLP
Trigger: AGGGAGCTGTCTGACTCCAGTGGTGTGTTGGAGATAAATTCTTCAGTACACCAAAATGCCAGTCCCTGGGGAGTACCAGTTCAGGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp TGTATCCTTCTGTTTGACCATCACTGGGGATTGCCGCACCCCCACTaGAGTCATCCCAGTCCAAATCATTGTCCATATCTGAGATCGTTG +
Preference number: 5 (lower is better)
Translates to: CILLFDHHWGLPHPH*SHPSPNHCPYLRSL
Trigger: CAACGATCTCAGATATGGACAATGATTTGGACTGGGATGACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAGAAGGATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp TTCAGGTCCCATGCAAGCACTGAGGTGCTTCTCAGTCTCTTGCTTTaGTTCAGAATCGTGACATATATCAGGGCTGTCGGAAGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: FRSHASTEVLLSLLL*FRIVTYIRAVGSLR
Trigger: TCTCAGGCTTCCGACAGCCCTGATATATGTCACGATTCTGAAGCAAAGCAAGAGACTGAGAAGCACCTCAGTGCTTGCATGGGACCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp CACTTCTTCGATCAGGAAGTGCAGAAAGCACTATCTCTGCTGCTCTaGATCCCAGAGATTCATCCTCTGGAGACCCAGCTTCCTCTATTG +
Preference number: 5 (lower is better)
Translates to: HFFDQEVQKALSLLL*IPEIHPLETQLPLL
Trigger: CAATAGAGGAAGCTGGGTCTCCAGAGGATGAATCTCTGGGATGCAGAGCAGCAGAGATAGTGCTTTCTGCACTTCCTGATCGAAGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp TCCCGTTCCTCTTCGGCCGTATATTCTGGAATAGACTCTGACTCTTaGCCAGAATCTTTGTTGGCTGTGGGATCTTCATGGCCAGTGTAC +
Preference number: 5 (lower is better)
Translates to: SRSSSAVYSGIDSDS*PESLLAVGSSWPVY
Trigger: GTACACTGGCCATGAAGATCCCACAGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAATATACGGCCGAAGAGGAACGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000428286.5
ENST00000466266.6
ENST00000488346.5
CDS CCA 90 bp AGCTTCATCATGATCTTCTTTACCAAATGCACTCCAGGCTGGGAATaGCGCCACAGCTGCTGGTTCACCATCATCTGTAGGATTTCCCCA +
Preference number: 5 (lower is better)
Translates to: SFIMIFFTKCTPGWE*RHSCWFTIICRISP
Trigger: TGGGGAAATCCTACAGATGATGGTGAACCAGCAGCTGTGGCGCCATTCCCAGCCTGGAGTGCATTTGGTAAAGAAGATCATGATGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp GGTTTGTTTCATTGTACAGTTGCATCATGCTGGGGTCGTCGTAACTaGACTGGCTGCTTTCCCCGACGTCATCCTCCATGGAGATATTCT +
Preference number: 5 (lower is better)
Translates to: GLFHCTVASCWGRRN*TGCFPRRHPPWRYS
Trigger: AGAATATCTCCATGGAGGATGACGTCGGGGAAAGCAGCCAGTCCAGTTACGACGACCCCAGCATGATGCAACTGTACAATGAAACAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp TTGCAATTAGCTGCCCACTTTTCTCATTCAATGTGTGATGTTCACTaGGAGCACTGTCCTTGGTATGCTCATCAGAGGCAGGGAGCTCCC +
Preference number: 5 (lower is better)
Translates to: LQLAAHFSHSMCDVH*EHCPWYAHQRQGAP
Trigger: GGGAGCTCCCTGCCTCTGATGAGCATACCAAGGACAGTGCTCCCAGTGAACATCACACATTGAATGAGAAAAGTGGGCAGCTAATTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp ACTTTCACTTTGTCCATCGCCATGACCTTTCCATGGATCTGGGTGTaGAAAATACCCTGGATTCTCAAGCCTAGTCGCCAAGGATGCTGC +
Preference number: 5 (lower is better)
Translates to: TFTLSIAMTFPWIWV*KIPWILKPSRQGCC
Trigger: GCAGCATCCTTGGCGACTAGGCTTGAGAATCCAGGGTATTTTCCACACCCAGATCCATGGAAAGGTCATGGCGATGGACAAAGTGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp ATTGTTCCCGTGGATGTGTTGAGACCTGAGGCATCGCTGAAACTGTaGTCAAAGGCAGCTTCGCTTATATCCAGACAAGTGTCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: IVPVDVLRPEASLKL*SKAASLISRQVSEA
Trigger: AGCCTCAGACACTTGTCTGGATATAAGCGAAGCTGCCTTTGACCACAGTTTCAGCGATGCCTCAGGTCTCAACACATCCACGGGAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp TCCCGTTCCTCTTCGGCCGTATATTCTGGAATAGACTCTGACTCTTaGCCAGAATCTTTGTTGGCTGTGGGATCATGGCCAGTGTACTCA +
Preference number: 5 (lower is better)
Translates to: SRSSSAVYSGIDSDS*PESLLAVGSWPVYS
Trigger: TGAGTACACTGGCCATGATCCCACAGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAATATACGGCCGAAGAGGAACGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS CCA 90 bp GAAATGAGAGAATCCAAGTCACACGATTTAGGCCCAATAACCACATaGACCTTCTCCAAGCGTTTGCTTCGATTCGCGTCGCCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: EMRESKSHDLGPITT*TFSKRLLRFASPLL
Trigger: CAGAAGGGGCGACGCGAATCGAAGCAAACGCTTGGAGAAGGTCCATGTGGTTATTGGGCCTAAATCGTGTGACTTGGATTCTCTCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489555.1
CDS-3UTR CAA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTTGGTCCAGAGAAAGATaGATATTTGGGGCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSWSRER*IFGAVS
Trigger: GCTCACAGCCCCAAATATCAATCTTTCTCTGGACCA...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTGTCCTCCAAAGCCGGTaGTCCTCCCGTTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTVLQSR*SSRSSS
Trigger: CGAAGAGGAACGGGAGGACAACCGGCTTTGGAGGAC...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTGTCCTCCAAAGCCGGTaGTCCTCCCGTTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: SHTSENVLESNPIEHCMAVLQSR*SSRSSS
Trigger: CGAAGAGGAACGGGAGGACAACCGGCTTTGGAGGAC...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAATCTATGCCCTCAGGTTaGCACCACTACACTGAACAC +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTESMPSG*HHYTEH
Trigger: GTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAGA...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGAGGCGATGAGCCAGTaGCTCGGTGATGAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGEAMSQ*LGDELR
Trigger: CCTGAGCTCATCACCGAGCAACTGGCTCATCGCCTC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTGCAGAATGAGAAGATaGCTGGGACTGCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: MRLGWNRSHPFIFISASFCRMRR*LGLPRS
Trigger: GCTTCTGGGCAGTCCCAGCAATCTTCTCATTCTGCA...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAATCCACAAGGCTATCTTaGCCAGCCCCTGACAAAAGT +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTESTRLS*PAPDKS
Trigger: ACTTTTGTCAGGGGCTGGCAAAGATAGCCTTGTGGA...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAGACCATCACTGGGGATaGCCGCACCCCCACTGCAGT +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSDHHWG*PHPHCS
Trigger: ACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTC...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGACCATCACTGGGGATaGCCGCACCCCCACTGCAGT +
Preference number: 5 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVDHHWG*PHPHCS
Trigger: ACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCCTGGGTCTGGCTGCCTaGGTTGAATGTTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: MRLGWNRSHPFIFISASFLGLAA*VECSRV
Trigger: AACTCTGGAACATTCAACCAAGGCAGCCAGACCCAG...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACTGGGTCTGGCTGCCTaGGTTGAATGTTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: AITRALYEQLYALRFAPLLGLAA*VECSRV
Trigger: AACTCTGGAACATTCAACCAAGGCAGCCAGACCCAG...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAGTCCTGACACTGCTCTaGGGTAGGTGTTTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: AITRALYEQLYALRFAPLVLTLL*GRCFRS
Trigger: ACTCCTGAAACACCTACCCAAGAGCAGTGTCAGGAC...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTGATGGAGACAAAATGTaGGAGCCTGCTCCTACCGGC +
Preference number: 5 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSADGDKM*EPAPTG
Trigger: GCCGGTAGGAGCAGGCTCCAACATTTTGTCTCCATC...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGGCCAGAATCTTTGTaGGCTGTGGGATCATGGCCA +
Preference number: 5 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLWPESL*AVGSWP
Trigger: TGGCCATGATCCCACAGCCAACAAAGATTCTGGCCA...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376718.8
ENST00000443509.6
CDS TCA 90 bp CCAGGACCTGAACTGATTCGATTTCGAGATGACTGTTGCAGTGACTaGGGAGGAATGTCAGTCTCCTCTGCCGTGGAGTTACCATCTTTT +
Preference number: 5 (lower is better)
Translates to: PGPELIRFRDDCCSD*GGMSVSSAVELPSF
Trigger: AAAAGATGGTAACTCCACGGCAGAGGAGACTGACATTCCTCCTCAGTCACTGCAACAGTCATCTCGAAATCGAATCAGTTCAGGTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp CTGTATGAGGTGAAGCCCACATGTCTAGGTTCCCAGGACCTGAACTaGTTCGATTTCGAGATGACTGTTGCAGTGACTGAGGAGGAATGT +
Preference number: 5 (lower is better)
Translates to: LYEVKPTCLGSQDLN*FDFEMTVAVTEEEC
Trigger: ACATTCCTCCTCAGTCACTGCAACAGTCATCTCGAAATCGAATCAGTTCAGGTCCTGGGAACCTAGACATGTGGGCTTCACCTCATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp CGCACCCCCACTGCAGTCATCCCAGTCCAAATCATTGTCCATATCTaGGATCGTTGCAGTGGACTGAGTATCCTCCAAAATCACTCTGTT +
Preference number: 5 (lower is better)
Translates to: RTPTAVIPVQIIVHI*DRCSGLSILQNHSV
Trigger: AACAGAGTGATTTTGGAGGATACTCAGTCCACTGCAACGATCTCAGATATGGACAATGATTTGGACTGGGATGACTGCAGTGGGGGTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp GTTGTCCTCCCGTTCCTCTTCGGCCGTATATTCTGGAATAGACTCTaGCTCTTGGCCAGAATCTTTGTTGGCTGTGGGATCTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: VVLPFLFGRIFWNRL*LLARIFVGCGIFWK
Trigger: TTTCCAGAAGATCCCACAGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAATATACGGCCGAAGAGGAACGGGAGGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494975.1
CDS GCA 90 bp ATAGCCAATTGGAGGCAGCACAGTTGCGTTTTCAGAATCGAGTTCTaGATTGGATGGGACAAACTCCCGTCCAGGCTCATAAATGGGTTC +
Preference number: 5 (lower is better)
Translates to: IANWRQHSCVFRIEF*IGWDKLPSRLINGF
Trigger: GAACCCATTTATGAGCCTGGACGGGAGTTTGTCCCATCCAATGCAGAACTCGATTCTGAAAACGCAACTGTGCTGCCTCCAATTGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp GTTTTTGGTCTCAGCCTGGTTTCCCTCACTTCTTCGATCAGGAAGTaGAGAAAGCACTATCTCTGCTGCTCTGCATCCCAGAGATTCATC +
Preference number: 5 (lower is better)
Translates to: VFGLSLVSLTSSIRK*RKHYLCCSASQRFI
Trigger: GATGAATCTCTGGGATGCAGAGCAGCAGAGATAGTGCTTTCTGCACTTCCTGATCGAAGAAGTGAGGGAAACCAGGCTGAGACCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp CTGCTGCTGTGCGGCACAGCTTGCCCCAGATACTTTAATTATTTCTaGTCCTTCGGATTAGAAGGGCTGGAGCTAATTAGTCAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LLLCGTACPRYFNYF*SFGLEGLELISQVF
Trigger: GAAGACCTGACTAATTAGCTCCAGCCCTTCTAATCCGAAGGAGCAGAAATAATTAAAGTATCTGGGGCAAGCTGTGCCGCACAGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489555.1
CDS CCA 90 bp CTTCTCACTTTCACTTTGTCCATCGCCATGACCTTTCCATGGATCTaGGTGTGGAAAATACCCTGGATTCTCAAGCCTAGTCGCCAAGGA +
Preference number: 5 (lower is better)
Translates to: LLTFTLSIAMTFPWI*VWKIPWILKPSRQG
Trigger: TCCTTGGCGACTAGGCTTGAGAATCCAGGGTATTTTCCACACCCAGATCCATGGAAAGGTCATGGCGATGGACAAAGTGAAAGTGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp TTTCCACGGGCTCAATATCACCCTGAACTGGTACTCCCCAGGGACTaGCATTTTGGTGTACTGAAGAATTTATCTCCAACACACCACTGG +
Preference number: 5 (lower is better)
Translates to: FPRAQYHPELVLPRD*HFGVLKNLSPTHHW
Trigger: CCAGTGGTGTGTTGGAGATAAATTCTTCAGTACACCAAAATGCCAGTCCCTGGGGAGTACCAGTTCAGGGTGATATTGAGCCCGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp GACAAACTCCCGTCCAGGCTCATAAATGGGTTCTTCATCTATCTCTaGCTCAGTGAGACAAAGCTCACTGGATTCCACTTCAGGTCCCAT +
Preference number: 5 (lower is better)
Translates to: DKLPSRLINGFFIYL*LSETKLTGFHFRSH
Trigger: ATGGGACCTGAAGTGGAATCCAGTGAGCTTTGTCTCACTGAGCCAGAGATAGATGAAGAACCCATTTATGAGCCTGGACGGGAGTTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAGTCCTCCAAAGCCGGTaGTCCTCCCGTTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRVLQSR*SSRSSS
Trigger: CGAAGAGGAACGGGAGGACAACCGGCTTTGGAGGAC...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTGTCAATGCGCTGCTCTaGTTCTCCAATGACCACTGT +
Preference number: 5 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLVNALL*FSNDHC
Trigger: ACAGTGGTCATTGGAGAACAAGAGCAGCGCATTGAC...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCGTCAATGCGCTGCTCTaGTTCTCCAATGACCACTGT +
Preference number: 5 (lower is better)
Translates to: MRLGWNRSHPFIFISASFVNALL*FSNDHC
Trigger: ACAGTGGTCATTGGAGAACAAGAGCAGCGCATTGAC...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTCGGAACTCAACGTaGGCATCGCTCTGCTCAACC +
Preference number: 5 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSSRNST*ASLCST
Trigger: GGTTGAGCAGAGCGATGCCAACGTTGAGTTCCGAGA...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGAGGCGATGAGCCAGTaGCTCGGTGATGAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVEAMSQ*LGDELR
Trigger: CCTGAGCTCATCACCGAGCAACTGGCTCATCGCCTC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAACATGTATCCTTCTGTTaGACCATCACTGGGGATTGC +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTEHVSFC*TITGDC
Trigger: GCAATCCCCAGTGATGGTCAAACAGAAGGATACATG...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTCTCTGGTTCCTCGGTTaGAGGACTGAAAGTGACAGC +
Preference number: 5 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSALWFLG*RTESDS
Trigger: GCTGTCACTTTCAGTCCTCAAACCGAGGAACCAGAG...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGGATCTCTTCCTCTATaGACTCTTCACCACCGACAC +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGGSLPL*TLHHRH
Trigger: GTGTCGGTGGTGAAGAGTCAATAGAGGAAGAGATCC...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAGGATCTCTTCCTCTATaGACTCTTCACCACCGACAC +
Preference number: 5 (lower is better)
Translates to: AITRALYEQLYALRFAPLGSLPL*TLHHRH
Trigger: GTGTCGGTGGTGAAGAGTCAATAGAGGAAGAGATCC...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTTCAGCAACGTGGCAGTaGGCCACCTGGATCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SHTSENVLESNPIEHCMASATWQ*ATWISS
Trigger: GGAAGAGATCCAGGTGGCCAACTGCCACGTTGCTGA...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTCAGCAACGTGGCAGTaGGCCACCTGGATCTCTTCC +
Preference number: 5 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYSATWQ*ATWISS
Trigger: GGAAGAGATCCAGGTGGCCAACTGCCACGTTGCTGA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTCAGCAACGTGGCAGTaGGCCACCTGGATCTCTTCC +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGSATWQ*ATWISS
Trigger: GGAAGAGATCCAGGTGGCCAACTGCCACGTTGCTGA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTGGGATCAGGGCTGCTTaGTTGATTGTCACAGAATGG +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGGIRAA*LIVTEW
Trigger: CCATTCTGTGACAATCAACAAAGCAGCCCTGATCCC...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCGTCTGGCTGCCTTGGTaGAATGTTCCAGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: KVVTSSFYPGLQISWTALVWLPW*NVPELL
Trigger: GAGCAACTCTGGAACATTCAACCAAGGCAGCCAGAC...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTACAAGCTGGCTGAACTaGTCAGCATCTGGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSTSWLN*SASGSG
Trigger: GCCAGACCCAGATGCTGACAAGTTCAGCCAGCTTGT...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAACAAGCTGGCTGAACTaGTCAGCATCTGGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPTSWLN*SASGSG
Trigger: GCCAGACCCAGATGCTGACAAGTTCAGCCAGCTTGT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTCTGCTTGATAGCCAATaGGAGGCAGCACAGTTGCGT +
Preference number: 5 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSALLDSQ*EAAQLR
Trigger: ACGCAACTGTGCTGCCTCCAATTGGCTATCAAGCAG...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGTTCCCGTGGATGTGTaGAGACCTGAGGCATCGCTG +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGVPVDV*RPEASL
Trigger: CAGCGATGCCTCAGGTCTCAACACATCCACGGGAAC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp AAACAAAGCTCTTGCACCAGGCTGACTTTCAGGAGAAAAGCTGTCTaGTATCCAAGAACCGTCACCTTCTGGAGTTGGCTCTTGGTGAGT +
Preference number: 5 (lower is better)
Translates to: KQSSCTRLTFRRKAV*YPRTVTFWSWLLVS
Trigger: ACTCACCAAGAGCCAACTCCAGAAGGTGACGGTTCTTGGATATCAGACAGCTTTTCTCCTGAAAGTCAGCCTGGTGCAAGAGCTTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp GCTGTCATGTTCGCAGTGCGTCAGGATATCAGGATTCTCACCATCTaGTTTCAAACTGAAGGGCTTCTTAGCATCTATCCACAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: AVMFAVRQDIRILTI*FQTEGLLSIYPQVR
Trigger: CCTGACTTGTGGATAGATGCTAAGAAGCCCTTCAGTTTGAAAGCAGATGGTGAGAATCCTGATATCCTGACGCACTGCGAACATGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp CTTCAGAATCGTGACATATATCAGGGCTGTCGGAAGCCTGAGAATTaGTGTCATGTTCGCAGTGCGTCAGGATATCAGGATTCTCACCAT +
Preference number: 5 (lower is better)
Translates to: LQNRDIYQGCRKPEN*CHVRSASGYQDSHH
Trigger: ATGGTGAGAATCCTGATATCCTGACGCACTGCGAACATGACAGCAATTCTCAGGCTTCCGACAGCCCTGATATATGTCACGATTCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp AAACAGATTCCTGTTCACTGGAACTCCACGCATCTGCAATATTTTTaGAGTCAATTTCCAAACCACCCCACCAGCTGCTGCACCGTGCAT +
Preference number: 5 (lower is better)
Translates to: KQIPVHWNSTHLQYF*SQFPNHPTSCCTVH
Trigger: ATGCACGGTGCAGCAGCTGGTGGGGTGGTTTGGAAATTGACTCCAAAAATATTGCAGATGCGTGGAGTTCCAGTGAACAGGAATCTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp GATTCATTCAATGAATCCCAAGCTCTGGATTCATCCTCAGCAACGTaGCAGTTGGCCACCTGGATCTCTTCCTCTATTGACTCTTCACCA +
Preference number: 5 (lower is better)
Translates to: DSFNESQALDSSSAT*QLATWISSSIDSSP
Trigger: TGGTGAAGAGTCAATAGAGGAAGAGATCCAGGTGGCCAACTGCCACGTTGCTGAGGATGAATCCAGAGCTTGGGATTCATTGAATGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp TGGAGGCAGCACAGTTGCGTTTTCAGAATCGAGTTCTGCATTGGATaGGACAAACTCCCGTCCAGGCTCATAAATGGGTTCTTCATCTAT +
Preference number: 5 (lower is better)
Translates to: WRQHSCVFRIEFCIG*DKLPSRLINGFFIY
Trigger: ATAGATGAAGAACCCATTTATGAGCCTGGACGGGAGTTTGTCCCATCCAATGCAGAACTCGATTCTGAAAACGCAACTGTGCTGCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp CAATTGGAGGCAGCACAGTTGCGTTTTCAGAATCGAGTTCTGCATTaGATGGGACAAACTCCCGTCCAGGCTCATAAATGGGTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: QLEAAQLRFQNRVLH*MGQTPVQAHKWVLH
Trigger: ATGAAGAACCCATTTATGAGCCTGGACGGGAGTTTGTCCCATCCAATGCAGAACTCGATTCTGAAAACGCAACTGTGCTGCCTCCAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp TGTCTGAGGCTAGCAAAGCATCAGGAACCAAGGCAGGATTCTCTGTaGATAAATGTGGATCACCATCAAACAAAGCTCTTGCACCAGGCT +
Preference number: 5 (lower is better)
Translates to: CLRLAKHQEPRQDSL*INVDHHQTKLLHQA
Trigger: AGCCTGGTGCAAGAGCTTTGTTTGATGGTGATCCACATTTATCCACAGAGAATCCTGCCTTGGTTCCTGATGCTTTGCTAGCCTCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp CAGATATCTTGCTTCCCTAGGTCCCCATCAACTGGCGTTTCCGGATaGCCTTCGGATAATGTCAGTTTACTCATGTCATCTATTGTTCCC +
Preference number: 5 (lower is better)
Translates to: QISCFPRSPSTGVSG*PSDNVSLLMSSIVP
Trigger: GGGAACAATAGATGACATGAGTAAACTGACATTATCCGAAGGCCATCCGGAAACGCCAGTTGATGGGGACCTAGGGAAGCAAGATATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGGTCCAGAGAAAGATaGATATTTGGGGCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLWSRER*IFGAVS
Trigger: GCTCACAGCCCCAAATATCAATCTTTCTCTGGACCA...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTGGTCCAGAGAAAGATaGATATTTGGGGCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGWSRER*IFGAVS
Trigger: GCTCACAGCCCCAAATATCAATCTTTCTCTGGACCA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGTGGCCAGAATCTTTGTaGGCTGTGGGATCTTCATGG +
Preference number: 5 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVWPESL*AVGSSW
Trigger: CCATGAAGATCCCACAGCCAACAAAGATTCTGGCCA...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000428286.5
CDS-3UTR CAA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAGTCCTCCAAAGCCGGTaGTCCTCCCGTTCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEVLQSR*SSRSSS
Trigger: CGAAGAGGAACGGGAGGACAACCGGCTTTGGAGGAC...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGTCAATGCGCTGCTCTaGTTCTCCAATGACCACTGT +
Preference number: 5 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSVNALL*FSNDHC
Trigger: ACAGTGGTCATTGGAGAACAAGAGCAGCGCATTGAC...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTATGTTGCTGTGTCTGTTaGGCTATAACAAGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: AITRALYEQLYALRFAPLCCCVC*AITRAL
Trigger: GAGGGCTCTTGTTATAGCCAAACAGACACAGCAACA...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCTGCCCCAATGACCCCTaGGTTCCCTTAACTACAGAT +
Preference number: 5 (lower is better)
Translates to: KVVTSSFYPGLQISWTALCPNDP*VPLTTD
Trigger: ATCTGTAGTTAAGGGAACCAAGGGGTCATTGGGGCA...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGTGCCCCAATGACCCCTaGGTTCCCTTAACTACAGAT +
Preference number: 5 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVCPNDP*VPLTTD
Trigger: ATCTGTAGTTAAGGGAACCAAGGGGTCATTGGGGCA...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGTCGTGGCTAGGGGTTaGGAACCCGGGTACTCGGAG +
Preference number: 5 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEVVARG*EPGYSE
Trigger: CTCCGAGTACCCGGGTTCCAAACCCCTAGCCACGAC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCGGAACTCAACGTaGGCATCGCTCTGCTCAACC +
Preference number: 5 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALSRNST*ASLCST
Trigger: GGTTGAGCAGAGCGATGCCAACGTTGAGTTCCGAGA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGGAGGCGATGAGCCAGTaGCTCGGTGATGAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLEAMSQ*LGDELR
Trigger: CCTGAGCTCATCACCGAGCAACTGGCTCATCGCCTC...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTATTCACAGAGCTGGGTaGTGGCTCTATGTCAGAACC +
Preference number: 5 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAIHRAG*WLYVRT
Trigger: GGTTCTGACATAGAGCCACAACCCAGCTCTGTGAAT...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAACTTCTATCAGGTGGTTaGTTCCTTGGGGAGATGTAT +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTELLSGG*FLGEMY
Trigger: ATACATCTCCCCAAGGAACAAACCACCTGATAGAAG...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCATGTATCCTTCTGTTaGACCATCACTGGGGATTGC +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGHVSFC*TITGDC
Trigger: GCAATCCCCAGTGATGGTCAAACAGAAGGATACATG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCCCAATCTACCTGATTaGCTTCCTGATACTCCAAGC +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGPNLPD*LPDTPS
Trigger: GCTTGGAGTATCAGGAAGCAAATCAGGTAGATTGGG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCTGGGAGCACTGTCCTaGGTATGCTCATCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGLGALS*VCSSEA
Trigger: TGCCTCTGATGAGCATACCAAGGACAGTGCTCCCAG...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCACTCTGGTTCCTCGGTTaGAGGACTGAAAGTGACAGC +
Preference number: 5 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPLWFLG*RTESDS
Trigger: GCTGTCACTTTCAGTCCTCAAACCGAGGAACCAGAG...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCGGGATCAGGGCTGCTTaGTTGATTGTCACAGAATGG +
Preference number: 5 (lower is better)
Translates to: KVVTSSFYPGLQISWTALGIRAA*LIVTEW
Trigger: CCATTCTGTGACAATCAACAAAGCAGCCCTGATCCC...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAAGCTTTGGGAGATATTaGCCATGCAACATCTCCTGT +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTESFGRY*PCNISC
Trigger: ACAGGAGATGTTGCATGGCAAATATCTCCCAAAGCT...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAATTTGGGAACGAAGCTTaGGGAGATATTTGCCATGCA +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTEFGNEA*GDICHA
Trigger: TGCATGGCAAATATCTCCCAAAGCTTCGTTCCCAAA...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGACAAGCTGGCTGAACTaGTCAGCATCTGGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWTSWLN*SASGSG
Trigger: GCCAGACCCAGATGCTGACAAGTTCAGCCAGCTTGT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCCGTCACCTTCTGGAGTaGGCTCTTGGTGAGTTACAA +
Preference number: 5 (lower is better)
Translates to: KVVTSSFYPGLQISWTALRHLLE*ALGELQ
Trigger: TTGTAACTCACCAAGAGCCAACTCCAGAAGGTGACG...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCATCAAACAAAGCTCTaGCACCAGGCTGACTTTCAG +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGHQTKL*HQADFQ
Trigger: CTGAAAGTCAGCCTGGTGCAAGAGCTTTGTTTGATG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTGTTCCCGTGGATGTGTaGAGACCTGAGGCATCGCTG +
Preference number: 5 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCVPVDV*RPEASL
Trigger: CAGCGATGCCTCAGGTCTCAACACATCCACGGGAAC...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATGATGGAGACAAAATGTaGGAGCCTGCTCCTACCGGC +
Preference number: 5 (lower is better)
Translates to: ATALKQTFSLLDTIFCANDGDKM*EPAPTG
Trigger: GCCGGTAGGAGCAGGCTCCAACATTTTGTCTCCATC...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAACTTCCCAGTCAACGTTaGATGGAGACAAAATGTTGG +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTELPSQR*METKCW
Trigger: CCAACATTTTGTCTCCATCAAACGTTGACTGGGAAG...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGATGTGTCTGGGAAGCTaGCTAACTGAGTTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVMCLGS*LTEFPA
Trigger: TGCAGGGAACTCAGTTAGCAAGCTTCCCAGACACAT...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAACTGACAGTAGTCCATTaGGTCTTGATATCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTELTVVH*VLISWF
Trigger: GAACCAGGATATCAAGACCAAATGGACTACTGTCAG...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp CAGTTTACTCATGTCATCTATTGTTCCCGTGGATGTGTTGAGACCTaGGGCATCGCTGAAACTGTGGTCAAAGGCAGCTTCGCTTATATC +
Preference number: 5 (lower is better)
Translates to: QFTHVIYCSRGCVET*GIAETVVKGSFAYI
Trigger: GATATAAGCGAAGCTGCCTTTGACCACAGTTTCAGCGATGCCTCAGGTCTCAACACATCCACGGGAACAATAGATGACATGAGTAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp ACAGAGTGGGGGTTAATAAAGAGCAATGGTTATGTATGGCCTCTGTaGCCCATACTTTCTCTGTCAGGCTCCAAACTGTCAATCATGGCC +
Preference number: 5 (lower is better)
Translates to: TEWGLIKSNGYVWPL*PILSLSGSKLSIMA
Trigger: GGCCATGATTGACAGTTTGGAGCCTGACAGAGAAAGTATGGGTCACAGAGGCCATACATAACCATTGCTCTTTATTAACCCCCACTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480674.1
CDS CCA 90 bp GTCTACATTGGCATCCACCTGAGCCTGGTTAGAATCATTGAGATCTaGAGGGTTCTCTATGAAATTCACAGAGCTGGGTTGTGGCTCTAT +
Preference number: 5 (lower is better)
Translates to: VYIGIHLSLVRIIEI*RVLYEIHRAGLWLY
Trigger: ATAGAGCCACAACCCAGCTCTGTGAATTTCATAGAGAACCCTCCAGATCTCAATGATTCTAACCAGGCTCAGGTGGATGCCAATGTAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp GAATGCCACAAAGAAGCAAAGTCTTCTATCAGGTGGTTTGTTCCTTaGGGAGATGTATTTGGCAAAGGTGACTTCTCCATGGGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: ECHKEAKSSIRWFVP*GDVFGKGDFSMGRF
Trigger: GAACCTGCCCATGGAGAAGTCACCTTTGCCAAATACATCTCCCCAAGGAACAAACCACCTGATAGAAGACTTTGCTTCTTTGTGGCATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp CTCCAGCAAATGTTGGTGATGTGTAAGAGTCTGAGGTGGAATAATTaGTATCTAAGGGGGAAGGCACCGAATCTTCTCCTAGGTTGGATG +
Preference number: 5 (lower is better)
Translates to: LQQMLVMCKSLRWNN*YLRGKAPNLLLGWM
Trigger: CATCCAACCTAGGAGAAGATTCGGTGCCTTCCCCCTTAGATACCAATTATTCCACCTCAGACTCTTACACATCACCAACATTTGCTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp TATCTGTTTCTACTTCCCAGTCAACGTTTGATGGAGACAAAATGTTaGAGCCTGCTCCTACCGGCAAATAAACGGACTCAGGGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: YLFLLPSQRLMETKC*SLLLPANKRTQGLH
Trigger: GTGAAGACCCTGAGTCCGTTTATTTGCCGGTAGGAGCAGGCTCCAACATTTTGTCTCCATCAAACGTTGACTGGGAAGTAGAAACAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp ACTACTTTCCTCTTTGTAAACTTCTTAAGGTGCACTGTAGCACAGTaGTCCCAGGCATGCATTTGGAGCCAGAGTTCCTGGATTGAAAGG +
Preference number: 5 (lower is better)
Translates to: TTFLFVNFLRCTVAQ*SQACIWSQSSWIER
Trigger: CCTTTCAATCCAGGAACTCTGGCTCCAAATGCATGCCTGGGACCACTGTGCTACAGTGCACCTTAAGAAGTTTACAAAGAGGAAAGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376713.3
CDS-3UTR CAA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATGGGAGAGGTGTAATTaGGGCTTTCAAAAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSWERCN*GFQKWR
Trigger: CCTCCACTTTTGAAAGCCCAAATTACACCTCTCCCA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTGTTGCTGTGTCTGTTaGGCTATAACAAGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSACCCVC*AITRAL
Trigger: GAGGGCTCTTGTTATAGCCAAACAGACACAGCAACA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAACCTTCTCCAAGCGTTaGCTTCGATTCAGTTTAGAT +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTETFSKR*LRFSLD
Trigger: ATCTAAACTGAATCGAAGCAAACGCTTGGAGAAGGT...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTCCATGGTCATCCACTaGAAAAGAATGCTACCTCTG +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGSMVIH*KRMLPL
Trigger: CAGAGGTAGCATTCTTTTCAAGTGGATGACCATGGA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACTGCCACGGCTTCTGTaGAGGATGTCCGGCTATTGG +
Preference number: 5 (lower is better)
Translates to: WKKVTSALSLSGRYVSTELPRLL*RMSGYW
Trigger: CCAATAGCCGGACATCCTCAACAGAAGCCGTGGCAG...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCAAAACAGAGCTCTCCTaGGATGAGCGGCTGCTCCTA +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGKTELS*DERLLL
Trigger: TAGGAGCAGCCGCTCATCCAAGGAGAGCTCTGTTTT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCAACTATTCATGGGTGTaGGTGGGATCCTCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: KVVTSSFYPGLQISWTALNYSWV*VGSSFQ
Trigger: CTGGAAAGAGGATCCCACCAACACCCATGAATAGTT...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTAGGCAAACCCACTTTTaGCCATGGCCCACTCATTCG +
Preference number: 5 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTRQTHF*PWPTHS
Trigger: CGAATGAGTGGGCCATGGCAAAAAGTGGGTTTGCCT...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTATCTGTGTGCTCTGTCTaGAGTTCATTTTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: AITRALYEQLYALRFAPLSVCSV*SSFSSR
Trigger: CCTGGATGAAAATGAACTCAAGACAGAGCACACAGA...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCACCATATCTGAGATCGTaGCAGTGGACTGAGTATCCT +
Preference number: 5 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSPYLRS*QWTEYP
Trigger: AGGATACTCAGTCCACTGCAACGATCTCAGATATGG...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAGACCATCACTGGGGATaGCCGCACCCCCACTGCAGT +
Preference number: 5 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQDHHWG*PHPHCS
Trigger: ACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTC...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTCTGGGAGCACTGTCCTaGGTATGCTCATCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCLGALS*VCSSEA
Trigger: TGCCTCTGATGAGCATACCAAGGACAGTGCTCCCAG...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATTTCATGGGTATCTTTaGGCTGCAGGTTATCTGCGG +
Preference number: 5 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSFHGYL*AAGYLR
Trigger: CCGCAGATAACCTGCAGCCAAAAGATACCCATGAAA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTTCACTCCAGTTGCCTaGGTTTTCTTCTTGATACCC +
Preference number: 5 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLFTPVA*VFFLIP
Trigger: GGGTATCAAGAAGAAAACCAAGGCAACTGGAGTGAA...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCATCAGCAACGTGGCAGTaGGCCACCTGGATCTCTTCC +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPSATWQ*ATWISS
Trigger: GGAAGAGATCCAGGTGGCCAACTGCCACGTTGCTGA...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATTGAATGTTCCAGAGTaGCTCATGGGAGTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSLNVPE*LMGVLP
Trigger: GGGAAGAACTCCCATGAGCAACTCTGGAACATTCAA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGTCTGGCTGCCTTGGTaGAATGTTCCAGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWVWLPW*NVPELL
Trigger: GAGCAACTCTGGAACATTCAACCAAGGCAGCCAGAC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGTCTGGCTGCCTTGGTaGAATGTTCCAGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGVWLPW*NVPELL
Trigger: GAGCAACTCTGGAACATTCAACCAAGGCAGCCAGAC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTCCTGACACTGCTCTaGGGTAGGTGTTTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYVLTLL*GRCFRS
Trigger: ACTCCTGAAACACCTACCCAAGAGCAGTGTCAGGAC...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCATGGCTTCATTATCAGTaGGGTGGGAGAACTGACAGC +
Preference number: 5 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPWLHYQ*GGRTDS
Trigger: GCTGTCAGTTCTCCCACCCAACTGATAATGAAGCCA...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCGTGCTTCTCAGTCTCTaGCTTTGCTTCAGAATCGTG +
Preference number: 5 (lower is better)
Translates to: KVVTSSFYPGLQISWTALVLLSL*LCFRIV
Trigger: CACGATTCTGAAGCAAAGCAAGAGACTGAGAAGCAC...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAGAATCGAGTTCTGCATaGGATGGGACAAACTCCCGT +
Preference number: 5 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPESSSA*DGTNSR
Trigger: ACGGGAGTTTGTCCCATCCAATGCAGAACTCGATTC...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTCATCAAACAAAGCTCTaGCACCAGGCTGACTTTCAG +
Preference number: 5 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAHQTKL*HQADFQ
Trigger: CTGAAAGTCAGCCTGGTGCAAGAGCTTTGTTTGATG...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTACCCAGCTTCCTCTATaGTTTCAGCACTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTTQLPL*FQHSGQ
Trigger: CTGCCCAGAGTGCTGAAACAATAGAGGAAGCTGGGT...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAATGTGTCTGGGAAGCTaGCTAACTGAGTTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPMCLGS*LTEFPA
Trigger: TGCAGGGAACTCAGTTAGCAAGCTTCCCAGACACAT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCCATCCAACTCTGGTCTaGTGCAGGGCTTTCAAAAGA +
Preference number: 5 (lower is better)
Translates to: KVVTSSFYPGLQISWTALHPTLV*CRAFKR
Trigger: TCTTTTGAAAGCCCTGCACAAGACCAGAGTTGGATG...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTGGCCAGAATCTTTGTaGGCTGTGGGATCATGGCCA +
Preference number: 5 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALWPESL*AVGSWP
Trigger: TGGCCATGATCCCACAGCCAACAAAGATTCTGGCCA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTTCCTCCTTCTTGGGGTaGCACCATTCAAGTACACAA +
Preference number: 5 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSASSFLG*HHSSTQ
Trigger: TTGTGTACTTGAATGGTGCAACCCCAAGAAGGAGGA...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp TCCCAGTCCAAATCATTGTCCATATCTGAGATCGTTGCAGTGGACTaGGTATCCTCCAAAATCACTCTGTTCCACAAGTCGAGACTGTCA +
Preference number: 5 (lower is better)
Translates to: SQSKSLSISEIVAVD*VSSKITLFHKSRLS
Trigger: TGACAGTCTCGACTTGTGGAACAGAGTGATTTTGGAGGATACTCAGTCCACTGCAACGATCTCAGATATGGACAATGATTTGGACTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp GTGACAGCAAGAGAGCTGATTTTGCCTGATTTAATGCAGATTTCCTaGTGTTCAGATGCAACCAGAGAAGACAGTTCCTGGTCACTCTGC +
Preference number: 5 (lower is better)
Translates to: VTARELILPDLMQIS*CSDATREDSSWSLC
Trigger: GCAGAGTGACCAGGAACTGTCTTCTCTGGTTGCATCTGAACATCAGGAAATCTGCATTAAATCAGGCAAAATCAGCTCTCTTGCTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp GTGGATAAATGTGGATCACCATCAAACAAAGCTCTTGCACCAGGCTaGCTTTCAGGAGAAAAGCTGTCTGATATCCAAGAACCGTCACCT +
Preference number: 5 (lower is better)
Translates to: VDKCGSPSNKALAPG*LSGEKLSDIQEPSP
Trigger: AGGTGACGGTTCTTGGATATCAGACAGCTTTTCTCCTGAAAGTCAGCCTGGTGCAAGAGCTTTGTTTGATGGTGATCCACATTTATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp ACGAGAGAAGAGGAAGACTCTCGGAACTCAACGTTGGCATCGCTCTaGTCAACCGGATTAATGACTTTGACAACTGCTGATTCTAAAGTT +
Preference number: 5 (lower is better)
Translates to: TREEEDSRNSTLASL*STGLMTLTTADSKV
Trigger: AACTTTAGAATCAGCAGTTGTCAAAGTCATTAATCCGGTTGAGCAGAGCGATGCCAACGTTGAGTTCCGAGAGTCTTCCTCTTCTCTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376713.3
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
ENST00000492157.5
CDS GCA 90 bp GATTTCCAGGTGCAAAGATGTGATCCCTGGAGTCATTGTTTTTCTTaGCCCAGATTTCTGGAGCTGCTTCATTGTTTATCTCACTGGGTG +
Preference number: 5 (lower is better)
Translates to: DFQVQRCDPWSHCFS*PRFLELLHCLSHWV
Trigger: CACCCAGTGAGATAAACAATGAAGCAGCTCCAGAAATCTGGGGCAAGAAAAACAATGACTCCAGGGATCACATCTTTGCACCTGGAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp CTATCAATGGAGCTTGGCTTATGCTCTTTCCATGATTCAGGGCTCTaGAAAACAGATTCCTGTTCACTGGAACTCCACGCATCTGCAATA +
Preference number: 5 (lower is better)
Translates to: LSMELGLCSFHDSGL*KTDSCSLELHASAI
Trigger: TATTGCAGATGCGTGGAGTTCCAGTGAACAGGAATCTGTTTTCCAGAGCCCTGAATCATGGAAAGAGCATAAGCCAAGCTCCATTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp CGAGGCTCTTTGGTTGAAATACAGAATCTGAGGCTCTCCTATCAATaGAGCTTGGCTTATGCTCTTTCCATGATTCAGGGCTCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: RGSLVEIQNLRLSYQ*SLAYALSMIQGSGK
Trigger: TTTTCCAGAGCCCTGAATCATGGAAAGAGCATAAGCCAAGCTCCATTGATAGGAGAGCCTCAGATTCTGTATTTCAACCAAAGAGCCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp CCTTTTCGTCTCCAGCAAATGTTGGTGATGTGTAAGAGTCTGAGGTaGAATAATTGGTATCTAAGGGGGAAGGCACCGAATCTTCTCCTA +
Preference number: 5 (lower is better)
Translates to: PFRLQQMLVMCKSLR*NNWYLRGKAPNLLL
Trigger: TAGGAGAAGATTCGGTGCCTTCCCCCTTAGATACCAATTATTCCACCTCAGACTCTTACACATCACCAACATTTGCTGGAGACGAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp AGTCATCCCAGTCCAAATCATTGTCCATATCTGAGATCGTTGCAGTaGACTGAGTATCCTCCAAAATCACTCTGTTCCACAAGTCGAGAC +
Preference number: 5 (lower is better)
Translates to: SHPSPNHCPYLRSLQ*TEYPPKSLCSTSRD
Trigger: GTCTCGACTTGTGGAACAGAGTGATTTTGGAGGATACTCAGTCCACTGCAACGATCTCAGATATGGACAATGATTTGGACTGGGATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp AGTGATGGATCACCAACCTCACTATGGCCCAAGAACATCCAACTCTaGTCTTGTGCAGGGCTTTCAAAAGATGATCTCGTATCGCTTTTA +
Preference number: 5 (lower is better)
Translates to: SDGSPTSLWPKNIQL*SCAGLSKDDLVSLL
Trigger: TAAAAGCGATACGAGATCATCTTTTGAAAGCCCTGCACAAGACCAGAGTTGGATGTTCTTGGGCCATAGTGAGGTTGGTGATCCATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTTCAAGTTCATCCACATaGATGTCAATTTCATCTGGA +
Preference number: 5 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSSSSST*MSISSG
Trigger: TCCAGATGAAATTGACATCAATGTGGATGAACTTGA...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTAAGTTTGCAGCCTCATTaGTCCGTTCTGTTAGAGAAA +
Preference number: 5 (lower is better)
Translates to: AITRALYEQLYALRFAPLSLQPH*SVLLEK
Trigger: TTTCTCTAACAGAACGGACAAATGAGGCTGCAAACT...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCAACAAGATACTCGCTaGAAAGGATCAAGAGGAGAA +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGQQDTR*KGSRGE
Trigger: TTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTTCTATGCCCTCAGGTTaGCACCACTACACTGAACAC +
Preference number: 5 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTSMPSG*HHYTEH
Trigger: GTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAGA...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTGCCCCAATGACCCCTaGGTTCCCTTAACTACAGAT +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGCPNDP*VPLTTD
Trigger: ATCTGTAGTTAAGGGAACCAAGGGGTCATTGGGGCA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGACAGCTCTCCCCAATGAATTTTCCACCATGAGACTAGGGTGGAACCGCTCTACCGGATTAATGACTTaGACAACTGCTGATTCTAAA +
Preference number: 5 (lower is better)
Translates to: WTALPNEFSTMRLGWNRSTGLMT*TTADSK
Trigger: TTTAGAATCAGCAGTTGTCAAAGTCATTAATCCGGT...AGAGCGGTTCCACCCTAGTCTCATGGTGGAAAATTCATTGGGGAGAGCTGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGGTCTCCTGTAGGACGTaGATGATGTCCTCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWVSCRT*MMSSLG
Trigger: TCCAAGAGAGGACATCATCAACGTCCTACAGGAGAC...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAGAGGATGTCCGGCTATaGGAGACCATCTCTGGACAC +
Preference number: 5 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIEDVRL*ETISGH
Trigger: GTGTCCAGAGATGGTCTCCAATAGCCGGACATCCTC...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAGAGGATGTCCGGCTATaGGAGACCATCTCTGGACAC +
Preference number: 5 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIEDVRL*ETISGH
Trigger: GTGTCCAGAGATGGTCTCCAATAGCCGGACATCCTC...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGACTGCCACGGCTTCTGTaGAGGATGTCCGGCTATTGG +
Preference number: 5 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRLPRLL*RMSGYW
Trigger: CCAATAGCCGGACATCCTCAACAGAAGCCGTGGCAG...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTGCCTGGTTAGAATCATaGAGATCTGGAGGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSAWLES*RSGGFS
Trigger: AGAGAACCCTCCAGATCTCAATGATTCTAACCAGGC...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTAAAACAGAGCTCTCCTaGGATGAGCGGCTGCTCCTA +
Preference number: 5 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVKTELS*DERLLL
Trigger: TAGGAGCAGCCGCTCATCCAAGGAGAGCTCTGTTTT...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTGCAGAATGAGAAGATaGCTGGGACTGCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVCRMRR*LGLPRS
Trigger: GCTTCTGGGCAGTCCCAGCAATCTTCTCATTCTGCA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCATCTCTGGGACTGTCTaGTCTCTGGACAAACTCCTC +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGISGTV*SLDKLL
Trigger: GAGGAGTTTGTCCAGAGACAAGACAGTCCCAGAGAT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCACTAACAGAAGGTGTCTaGCTGCTTGTTGGGTGCAAA +
Preference number: 5 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPLTEGV*LLVGCK
Trigger: TTTGCACCCAACAAGCAGCAAGACACCTTCTGTTAG...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAAGGCAAACCCACTTTTaGCCATGGCCCACTCATTCG +
Preference number: 5 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRRQTHF*PWPTHS
Trigger: CGAATGAGTGGGCCATGGCAAAAAGTGGGTTTGCCT...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTATCTCACTGGGTGAATaGTCCAGTAGTTCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGISLGE*SSSSEE
Trigger: TTCTTCAGAACTACTGGACAATTCACCCAGTGAGAT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTATCTCACTGGGTGAATaGTCCAGTAGTTCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLISLGE*SSSSEE
Trigger: TTCTTCAGAACTACTGGACAATTCACCCAGTGAGAT...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAATCTTTAGCAAATGGCTaGTGTTCAGTTTCCTTTTCG +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTESLANG*CSVSFS
Trigger: CGAAAAGGAAACTGAACACAAGCCATTTGCTAAAGA...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATCTGTGTGCTCTGTCTaGAGTTCATTTTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSSVCSV*SSFSSR
Trigger: CCTGGATGAAAATGAACTCAAGACAGAGCACACAGA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTGTCGGTTTGTTTCATaGTACAGTTGCATCATGCTG +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGCRFVS*YSCIML
Trigger: CAGCATGATGCAACTGTACAATGAAACAAACCGACA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTGGGAGCACTGTCCTaGGTATGCTCATCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVLGALS*VCSSEA
Trigger: TGCCTCTGATGAGCATACCAAGGACAGTGCTCCCAG...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAAAATCCCAAATACTGTTaGCAATTAGCTGCCCACTTT +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTENPKYC*QLAAHF
Trigger: AAAGTGGGCAGCTAATTGCAAACAGTATTTGGGATT...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCCTTCTCACTTTCACTTaGTCCATCGCCATGACCTTT +
Preference number: 5 (lower is better)
Translates to: KVVTSSFYPGLQISWTALLLTFT*SIAMTF
Trigger: AAAGGTCATGGCGATGGACAAAGTGAAAGTGAGAAG...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCACTCTGGTTCCTCGGTTaGAGGACTGAAAGTGACAGC +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSLWFLG*RTESDS
Trigger: GCTGTCACTTTCAGTCCTCAAACCGAGGAACCAGAG...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAGTCTGGCTGCCTTGGTaGAATGTTCCAGAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAVWLPW*NVPELL
Trigger: GAGCAACTCTGGAACATTCAACCAAGGCAGCCAGAC...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAATTTCTGTGGCAATGCTaGAATTTGTCATCTCACCTA +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTEFLWQC*NLSSHL
Trigger: TAGGTGAGATGACAAATTCAAGCATTGCCACAGAAA...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCACTGCTTGATAGCCAATaGGAGGCAGCACAGTTGCGT +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSLLDSQ*EAAQLR
Trigger: ACGCAACTGTGCTGCCTCCAATTGGCTATCAAGCAG...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAACTGCTTGATAGCCAATaGGAGGCAGCACAGTTGCGT +
Preference number: 5 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKLLDSQ*EAAQLR
Trigger: ACGCAACTGTGCTGCCTCCAATTGGCTATCAAGCAG...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTGCCCTTTATGTCTGCTaGATAGCCAATTGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTALYVC*IANWRQ
Trigger: CTGCCTCCAATTGGCTATCAAGCAGACATAAAGGGC...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTTCTGGAGTTGGCTCTaGGTGAGTTACAAAAATGCT +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGFWSWL*VSYKNA
Trigger: AGCATTTTTGTAACTCACCAAGAGCCAACTCCAGAA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGTCACCTTCTGGAGTaGGCTCTTGGTGAGTTACAA +
Preference number: 5 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWRHLLE*ALGELQ
Trigger: TTGTAACTCACCAAGAGCCAACTCCAGAAGGTGACG...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACCCAGCTTCCTCTATaGTTTCAGCACTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSTQLPL*FQHSGQ
Trigger: CTGCCCAGAGTGCTGAAACAATAGAGGAAGCTGGGT...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAGATGGAGACAAAATGTaGGAGCCTGCTCCTACCGGC +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPDGDKM*EPAPTG
Trigger: GCCGGTAGGAGCAGGCTCCAACATTTTGTCTCCATC...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCTTGCTGGCACCATTaGGTGGTCCTATGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEPCWHH*VVLCLH
Trigger: GTGGAGACATAGGACCACCAAATGGTGCCAGCAAGG...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCACATCCAACTCTGGTCTaGTGCAGGGCTTTCAAAAGA +
Preference number: 5 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPHPTLV*CRAFKR
Trigger: TCTTTTGAAAGCCCTGCACAAGACCAGAGTTGGATG...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCAGCATTTCCCATTCATaGTCATGGGTGACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGSISHS*SWVTAC
Trigger: GCAGGCTGTCACCCATGACAATGAATGGGAAATGCT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAGTAGTCCATTTGGTCTaGATATCCTGGTTCCGAGCT +
Preference number: 5 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPVVHLV*ISWFRA
Trigger: AGCTCGGAACCAGGATATCAAGACCAAATGGACTAC...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCCTGACAGTAGTCCATTaGGTCTTGATATCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: KVVTSSFYPGLQISWTALLTVVH*VLISWF
Trigger: GAACCAGGATATCAAGACCAAATGGACTACTGTCAG...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAGAATCTTTGTaGGCTGTGGGATCATGGCCA +
Preference number: 5 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAWPESL*AVGSWP
Trigger: TGGCCATGATCCCACAGCCAACAAAGATTCTGGCCA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS TCA 90 bp AGAGAAAGATTGATATTTGGGGCTGTGAGCTTGATTCTCCGAGGATaGGTGTCATTAAGATCCAGAGAATTAGGAGGTTCAGGCCTCATG +
Preference number: 5 (lower is better)
Translates to: RERLIFGAVSLILRG*VSLRSRELGGSGLM
Trigger: CATGAGGCCTGAACCTCCTAATTCTCTGGATCTTAATGACACTCATCCTCGGAGAATCAAGCTCACAGCCCCAAATATCAATCTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
ENST00000466266.6
ENST00000480674.1
ENST00000488346.5
CDS TCA 90 bp CAAATACTGTTTGCAATTAGCTGCCCACTTTTCTCATTCAATGTGTaGTGTTCACTGGGAGCACTGTCCTTGGTATGCTCATCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: QILFAISCPLFSFNV*CSLGALSLVCSSEA
Trigger: TGCCTCTGATGAGCATACCAAGGACAGTGCTCCCAGTGAACATCACACATTGAATGAGAAAAGTGGGCAGCTAATTGCAAACAGTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp AGACTTAGGATCAGCTGTGACCAAGAACTTATTAGATTCATTCAATaGATCCCAAGCTCTGGATTCATCCTCAGCAACGTGGCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: RLRISCDQELIRFIQ*IPSSGFILSNVAVG
Trigger: GCCAACTGCCACGTTGCTGAGGATGAATCCAGAGCTTGGGATTCATTGAATGAATCTAATAAGTTCTTGGTCACAGCTGATCCTAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp CCAGAGTTGCTCATGGGAGTTCTTCCCATTACCTTCCAGAAAGGGTaGCTGATGGTTGTCACTAAAAGGATTAGTATAGTGTGTTTCCAC +
Preference number: 5 (lower is better)
Translates to: PELLMGVLPITFQKG*LMVVTKRISIVCFH
Trigger: GTGGAAACACACTATACTAATCCTTTTAGTGACAACCATCAGTCACCCTTTCTGGAAGGTAATGGGAAGAACTCCCATGAGCAACTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp AGAATTAGTCCATGTGTGATCCAGATCAGAACTGGGATTTCCAGGTaGAAAGATGTGATCCCTGGAGTCATTGTTTTTCTTGCCCCAGAT +
Preference number: 5 (lower is better)
Translates to: RISPCVIQIRTGISR*KDVIPGVIVFLAPD
Trigger: ATCTGGGGCAAGAAAAACAATGACTCCAGGGATCACATCTTTGCACCTGGAAATCCCAGTTCTGATCTGGATCACACATGGACTAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp GAAATGAGAGAATCCAAGTCACACGATTTAGGCCCAATAACCACATaGACCTTCTCCAAGCGTTTGCTTCGATTCAGTTTAGATTTGGCG +
Preference number: 5 (lower is better)
Translates to: EMRESKSHDLGPITT*TFSKRLLRFSLDLA
Trigger: CGCCAAATCTAAACTGAATCGAAGCAAACGCTTGGAGAAGGTCCATGTGGTTATTGGGCCTAAATCGTGTGACTTGGATTCTCTCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376713.3
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
ENST00000492157.5
CDS CCA 90 bp ATTGAGATCTGGAGGGTTCTCTATGAAATTCACAGAGCTGGGTTGTaGCTCTATGTCAGAACCATACAATTCCATAATCCCAGAAGACCC +
Preference number: 5 (lower is better)
Translates to: IEIWRVLYEIHRAGL*LYVRTIQFHNPRRP
Trigger: GGGTCTTCTGGGATTATGGAATTGTATGGTTCTGACATAGAGCCACAACCCAGCTCTGTGAATTTCATAGAGAACCCTCCAGATCTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp CTTTTTGGGTCATATCTTCTGTATAGAGTGAGGCTGGTTCTTCAGTaGATGGCGAGCTTTCTACTAAACTATTCATGGGTGTTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: LFGSYLLYRVRLVLQ*MASFLLNYSWVLVG
Trigger: TCCCACCAACACCCATGAATAGTTTAGTAGAAAGCTCGCCATCCACTGAAGAACCAGCCTCACTCTATACAGAAGATATGACCCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTTGGTCCAGAGAAAGATaGATATTTGGGGCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: SHTSENVLESNPIEHCMAWSRER*IFGAVS
Trigger: GCTCACAGCCCCAAATATCAATCTTTCTCTGGACCA...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACACTGAATCAAGTTCATCCACATaGATGTCAATTTCATCTGGA +
Preference number: 5 (lower is better)
Translates to: QEPSMNSSMPSGLHHYTESSSST*MSISSG
Trigger: TCCAGATGAAATTGACATCAATGTGGATGAACTTGA...TTCAGTGTAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAGTCAATGCGCTGCTCTaGTTCTCCAATGACCACTGT +
Preference number: 5 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKVNALL*FSNDHC
Trigger: ACAGTGGTCATTGGAGAACAAGAGCAGCGCATTGAC...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTATAACAAGAGCCCTCTATGAACAGCTCTATGCCCTCAGGTTTGCACCACTACTATCTAAATACAAATaGGGGTGGAGTAGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: AITRALYEQLYALRFAPLLSKYK*GWSRKG
Trigger: TCCTTTCCTACTCCACCCCAATTTGTATTTAGATAG...TAGTGGTGCAAACCTGAGGGCATAGAGCTGTTCATAGAGGGCTCTTGTTATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTTGGGAGAGGTGTAATTaGGGCTTTCAAAAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTWERCN*GFQKWR
Trigger: CCTCCACTTTTGAAAGCCCAAATTACACCTCTCCCA...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTGGGAGAGGTGTAATTaGGGCTTTCAAAAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALWERCN*GFQKWR
Trigger: CCTCCACTTTTGAAAGCCCAAATTACACCTCTCCCA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATCTATGCCCTCAGGTTaGCACCACTACACTGAACAC +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSSMPSG*HHYTEH
Trigger: GTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAGA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTTGTTGCTGTGTCTGTTaGGCTATAACAAGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: SHTSENVLESNPIEHCMACCCVC*AITRAL
Trigger: GAGGGCTCTTGTTATAGCCAAACAGACACAGCAACA...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGATGCCCCAATGACCCCTaGGTTCCCTTAACTACAGAT +
Preference number: 5 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRCPNDP*VPLTTD
Trigger: ATCTGTAGTTAAGGGAACCAAGGGGTCATTGGGGCA...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATGCCCCAATGACCCCTaGGTTCCCTTAACTACAGAT +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSCPNDP*VPLTTD
Trigger: ATCTGTAGTTAAGGGAACCAAGGGGTCATTGGGGCA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTCGATTCAGTTTAGATTaGGCGCGTTGCAAAAATTCT +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGRFSLD*ARCKNS
Trigger: AGAATTTTTGCAACGCGCCAAATCTAAACTGAATCG...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAATTCACAGAGCTGGGTaGTGGCTCTATGTCAGAACC +
Preference number: 5 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKIHRAG*WLYVRT
Trigger: GGTTCTGACATAGAGCCACAACCCAGCTCTGTGAAT...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGCCTGGTTAGAATCATaGAGATCTGGAGGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGAWLES*RSGGFS
Trigger: AGAGAACCCTCCAGATCTCAATGATTCTAACCAGGC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAAAAACAGAGCTCTCCTaGGATGAGCGGCTGCTCCTA +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPKTELS*DERLLL
Trigger: TAGGAGCAGCCGCTCATCCAAGGAGAGCTCTGTTTT...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTGGTGCTGGGTCAAAATaGAAGAGGTCGAAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCGAGSK*KRSKCS
Trigger: TGAGCACTTCGACCTCTTCAATTTTGACCCAGCACC...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAGGTGCTGGGTCAAAATaGAAGAGGTCGAAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEGAGSK*KRSKCS
Trigger: TGAGCACTTCGACCTCTTCAATTTTGACCCAGCACC...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATGCAGAATGAGAAGATaGCTGGGACTGCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQICRMRR*LGLPRS
Trigger: GCTTCTGGGCAGTCCCAGCAATCTTCTCATTCTGCA...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATCTGACAGGTCACTGTaGGGGAAGAAGTCATCTGCT +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSSDRSL*GKKSSA
Trigger: AGCAGATGACTTCTTCCCCAACAGTGACCTGTCAGA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTAACTATTCATGGGTGTaGGTGGGATCCTCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTNYSWV*VGSSFQ
Trigger: CTGGAAAGAGGATCCCACCAACACCCATGAATAGTT...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCCTATCAATGGAGCTaGGCTTATGCTCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSSYQWS*AYALSM
Trigger: CATGGAAAGAGCATAAGCCAAGCTCCATTGATAGGA...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATGTGTCTTGCTGCTTGTaGGGTGCAAATTCCAGGTAT +
Preference number: 5 (lower is better)
Translates to: ATALKQTFSLLDTIFCANVSCCL*GANSRY
Trigger: ATACCTGGAATTTGCACCCAACAAGCAGCAAGACAC...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTGTGTCTTGCTGCTTGTaGGGTGCAAATTCCAGGTAT +
Preference number: 5 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTVSCCL*GANSRY
Trigger: ATACCTGGAATTTGCACCCAACAAGCAGCAAGACAC...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTCTAACAGAAGGTGTCTaGCTGCTTGTTGGGTGCAAA +
Preference number: 5 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTLTEGV*LLVGCK
Trigger: TTTGCACCCAACAAGCAGCAAGACACCTTCTGTTAG...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAAGGCAAACCCACTTTTaGCCATGGCCCACTCATTCG +
Preference number: 5 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIRQTHF*PWPTHS
Trigger: CGAATGAGTGGGCCATGGCAAAAAGTGGGTTTGCCT...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CATAGTCAATGTTTTAGGCATTGTGGGACATACGGTCTGCTGAACTGCTCAGCTATCTCACTGGGTGAATaGTCCAGTAGTTCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: HSQCFRHCGTYGLLNCSAISLGE*SSSSEE
Trigger: TTCTTCAGAACTACTGGACAATTCACCCAGTGAGAT...AGCTGAGCAGTTCAGCAGACCGTATGTCCCACAATGCCTAAAACATTGACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTTCTTTAGCAAATGGCTaGTGTTCAGTTTCCTTTTCG +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGSLANG*CSVSFS
Trigger: CGAAAAGGAAACTGAACACAAGCCATTTGCTAAAGA...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTTGTTTCATTGTACAGTaGCATCATGCTGGGGTCGTC +
Preference number: 5 (lower is better)
Translates to: SHTSENVLESNPIEHCMACFIVQ*HHAGVV
Trigger: GACGACCCCAGCATGATGCAACTGTACAATGAAACA...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCTGTCGGTTTGTTTCATaGTACAGTTGCATCATGCTG +
Preference number: 5 (lower is better)
Translates to: KVVTSSFYPGLQISWTALCRFVS*YSCIML
Trigger: CAGCATGATGCAACTGTACAATGAAACAAACCGACA...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATCCCAGTCCAAATCATaGTCCATATCTGAGATCGTT +
Preference number: 5 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSSQSKS*SISEIV
Trigger: AACGATCTCAGATATGGACAATGATTTGGACTGGGA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCCAATCTACCTGATTaGCTTCCTGATACTCCAAGC +
Preference number: 5 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWPNLPD*LPDTPS
Trigger: GCTTGGAGTATCAGGAAGCAAATCAGGTAGATTGGG...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTTAATCCCAAATACTGTTaGCAATTAGCTGCCCACTTT +
Preference number: 5 (lower is better)
Translates to: ETRVEPLSPLHFYFCQLLNPKYC*QLAAHF
Trigger: AAAGTGGGCAGCTAATTGCAAACAGTATTTGGGATT...AAGAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCACTCTGGTTCCTCGGTTaGAGGACTGAAAGTGACAGC +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPLWFLG*RTESDS
Trigger: GCTGTCACTTTCAGTCCTCAAACCGAGGAACCAGAG...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGTTTCATGGGTATCTTTaGGCTGCAGGTTATCTGCGG +
Preference number: 5 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWFHGYL*AAGYLR
Trigger: CCGCAGATAACCTGCAGCCAAAAGATACCCATGAAA...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCATTTGGGAACGAAGCTTaGGGAGATATTTGCCATGCA +
Preference number: 5 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPFGNEA*GDICHA
Trigger: TGCATGGCAAATATCTCCCAAAGCTTCGTTCCCAAA...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGAATTATCTTCGTTCTTaGGGAACGAAGCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVNYLRS*GTKLWE
Trigger: CTCCCAAAGCTTCGTTCCCAAAGAACGAAGATAATT...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTTTGAATGTTCCAGAGTaGCTCATGGGAGTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTLNVPE*LMGVLP
Trigger: GGGAAGAACTCCCATGAGCAACTCTGGAACATTCAA...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTGAATGTTCCAGAGTaGCTCATGGGAGTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: ATALKQTFSLLDTIFCANLNVPE*LMGVLP
Trigger: GGGAAGAACTCCCATGAGCAACTCTGGAACATTCAA...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTTGAATGTTCCAGAGTaGCTCATGGGAGTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALLNVPE*LMGVLP
Trigger: GGGAAGAACTCCCATGAGCAACTCTGGAACATTCAA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACCTGGGTCTGGCTGCCTaGGTTGAATGTTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHLGLAA*VECSRV
Trigger: AACTCTGGAACATTCAACCAAGGCAGCCAGACCCAG...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATGGCTTCATTATCAGTaGGGTGGGAGAACTGACAGC +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSWLHYQ*GGRTDS
Trigger: GCTGTCAGTTCTCCCACCCAACTGATAATGAAGCCA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTTCATTATCAGTaGGGTGGGAGAACTGACAGC +
Preference number: 5 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAWLHYQ*GGRTDS
Trigger: GCTGTCAGTTCTCCCACCCAACTGATAATGAAGCCA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAGAATCGAGTTCTGCATaGGATGGGACAAACTCCCGT +
Preference number: 5 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKESSSA*DGTNSR
Trigger: ACGGGAGTTTGTCCCATCCAATGCAGAACTCGATTC...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTTGGAGGCAGCACAGTaGCGTTTTCAGAATCGAGTT +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGLEAAQ*RFQNRV
Trigger: AACTCGATTCTGAAAACGCAACTGTGCTGCCTCCAA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAACAACTGGTTCCAAAATaGGTGCCATATCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKQLVPK*VPYLGW
Trigger: CCAGCCCAGATATGGCACCAATTTTGGAACCAGTTG...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCACAACTGGTTCCAAAATaGGTGCCATATCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSQLVPK*VPYLGW
Trigger: CCAGCCCAGATATGGCACCAATTTTGGAACCAGTTG...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTACCCAGCTTCCTCTATaGTTTCAGCACTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVTQLPL*FQHSGQ
Trigger: CTGCCCAGAGTGCTGAAACAATAGAGGAAGCTGGGT...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGATGGAGACAAAATGTaGGAGCCTGCTCCTACCGGC +
Preference number: 5 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLDGDKM*EPAPTG
Trigger: GCCGGTAGGAGCAGGCTCCAACATTTTGTCTCCATC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTCCTTGCTGGCACCATTaGGTGGTCCTATGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSPCWHH*VVLCLH
Trigger: GTGGAGACATAGGACCACCAAATGGTGCCAGCAAGG...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGACCTTGCTGGCACCATTaGGTGGTCCTATGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRPCWHH*VVLCLH
Trigger: GTGGAGACATAGGACCACCAAATGGTGCCAGCAAGG...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTAGCATTTCCCATTCATaGTCATGGGTGACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVSISHS*SWVTAC
Trigger: GCAGGCTGTCACCCATGACAATGAATGGGAAATGCT...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGTAGTCCATTTGGTCTaGATATCCTGGTTCCGAGCT +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGVVHLV*ISWFRA
Trigger: AGCTCGGAACCAGGATATCAAGACCAAATGGACTAC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp TTTGTTGGCTGTGGGATCTTCATGGCCAGTGTACTCAAAAGAATCTaGTTCATCGGGGGTATCAAGTTCATCCACATTGATGTCAATTTC +
Preference number: 5 (lower is better)
Translates to: FVGCGIFMASVLKRI*FIGGIKFIHIDVNF
Trigger: GAAATTGACATCAATGTGGATGAACTTGATACCCCCGATGAAGCAGATTCTTTTGAGTACACTGGCCATGAAGATCCCACAGCCAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000428286.5
ENST00000466266.6
ENST00000488346.5
CDS GCA 90 bp TTAACATTTGCTGAATGGCTGGGGATTTCAGGAGGCAATTCCCTTTaGTCTGAATCTGTGATATGTGAGGAGCCTGGTAACATGAATGAT +
Preference number: 5 (lower is better)
Translates to: LTFAEWLGISGGNSL*SESVICEEPGNMND
Trigger: ATCATTCATGTTACCAGGCTCCTCACATATCACAGATTCAGAGCAAAGGGAATTGCCTCCTGAAATCCCCAGCCATTCAGCAAATGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp ATTATCTTCGTTCTTTGGGAACGAAGCTTTGGGAGATATTTGCCATaGAACATCTCCTGTTGTCCCTGTTTCTGGAGAAGATCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: IIFVLWERSFGRYLP*NISCCPCFWRRSLL
Trigger: GAGAAGAGATCTTCTCCAGAAACAGGGACAACAGGAGATGTTGCATGGCAAATATCTCCCAAAGCTTCGTTCCCAAAGAACGAAGATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp GTCACCTTCTGGAGTTGGCTCTTGGTGAGTTACAAAAATGCTAGTTaGCACATTTTCAATCCTTGGGATTCTTCTGTCAACTGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: VTFWSWLLVSYKNAS*HIFNPWDSSVNWFQ
Trigger: TTGGAACCAGTTGACAGAAGAATCCCAAGGATTGAAAATGTGGCAACTAGCATTTTTGTAACTCACCAAGAGCCAACTCCAGAAGGTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 90 bp ATCTTTGTTGGCTGTGGGATCATGGCCAGTGTACTCAAAAGAATCTaGTTCATCGGGGGTATCAAGTTCATCCACATTGATGTCAATTTC +
Preference number: 5 (lower is better)
Translates to: IFVGCGIMASVLKRI*FIGGIKFIHIDVNF
Trigger: GAAATTGACATCAATGTGGATGAACTTGATACCCCCGATGAAGCAGATTCTTTTGAGTACACTGGCCATGATCCCACAGCCAACAAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000443509.6
CDS CCA 90 bp GCTCTTTCCATGATTCAGGGCTCTGGAAAACAGATTCCTGTTCACTaGAACTCCACGCATCTGCAATATTTTTGGAGTCAATTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: ALSMIQGSGKQIPVH*NSTHLQYFWSQFPN
Trigger: GTTTGGAAATTGACTCCAAAAATATTGCAGATGCGTGGAGTTCCAGTGAACAGGAATCTGTTTTCCAGAGCCCTGAATCATGGAAAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp GCATTTCCAGTTGAGAATTATCTTCGTTCTTTGGGAACGAAGCTTTaGGAGATATTTGCCATGCAACATCTCCTGTTGTCCCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: AFPVENYLRSLGTKL*EIFAMQHLLLSLFL
Trigger: CAGAAACAGGGACAACAGGAGATGTTGCATGGCAAATATCTCCCAAAGCTTCGTTCCCAAAGAACGAAGATAATTCTCAACTGGAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp GACTGGCATTTTGGTGTACTGAAGAATTTATCTCCAACACACCACTaGAGTCAGACAGCTCCCTTTCAAATGGACTTTCAATTAGTCTCC +
Preference number: 5 (lower is better)
Translates to: DWHFGVLKNLSPTHH*SQTAPFQMDFQLVS
Trigger: GGAGACTAATTGAAAGTCCATTTGAAAGGGAGCTGTCTGACTCCAGTGGTGTGTTGGAGATAAATTCTTCAGTACACCAAAATGCCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAATAGATCCTTCACTTaGGTCCAGAGAAAGATTGAT +
Preference number: 5 (lower is better)
Translates to: APGSAKWKKVTSALSLSGNRSFT*VQRKID
Trigger: ATCAATCTTTCTCTGGACCAAAGTGAAGGATCTATT...ACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCTCAAGTTCATCCACATaGATGTCAATTTCATCTGGA +
Preference number: 5 (lower is better)
Translates to: MRLGWNRSHPFIFISASFSSSST*MSISSG
Trigger: TCCAGATGAAATTGACATCAATGTGGATGAACTTGA...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTTGGCCAGAATCTTTGTaGGCTGTGGGATCTTCATGG +
Preference number: 5 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVWPESL*AVGSSW
Trigger: CCATGAAGATCCCACAGCCAACAAAGATTCTGGCCA...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000428286.5
CDS-3UTR CAA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTCAACAAGATACTCGCTaGAAAGGATCAAGAGGAGAA +
Preference number: 5 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSQQDTR*KGSRGE
Trigger: TTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTG...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCTATGCCCTCAGGTTaGCACCACTACACTGAACAC +
Preference number: 5 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQISMPSG*HHYTEH
Trigger: GTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAGA...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGATGTTGCTGTGTCTGTTaGGCTATAACAAGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRCCCVC*AITRAL
Trigger: GAGGGCTCTTGTTATAGCCAAACAGACACAGCAACA...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGAGACTAGGGTGGAACCGCTCTCACCCCTTCATTTTTATTTCTGCCAGCTTCGCTGAAACAAAATCATaGGGACAAATGCCCATAATT +
Preference number: 5 (lower is better)
Translates to: MRLGWNRSHPFIFISASFAETKS*GQMPII
Trigger: AATTATGGGCATTTGTCCCAATGATTTTGTTTCAGC...GAAGCTGGCAGAAATAAAAATGAAGGGGTGAGAGCGGTTCCACCCTAGTCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGTTTAGATTTGGCGCGTaGCAAAAATTCTTCCATGTC +
Preference number: 5 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVFRFGA*QKFFHV
Trigger: GACATGGAAGAATTTTTGCAACGCGCCAAATCTAAA...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCATTTAGATTTGGCGCGTaGCAAAAATTCTTCCATGTC +
Preference number: 5 (lower is better)
Translates to: MAPGSAKWKKVTSALSLSFRFGA*QKFFHV
Trigger: GACATGGAAGAATTTTTGCAACGCGCCAAATCTAAA...TGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAACCTTCTCCAAGCGTTaGCTTCGATTCAGTTTAGAT +
Preference number: 5 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPTFSKR*LRFSLD
Trigger: ATCTAAACTGAATCGAAGCAAACGCTTGGAGAAGGT...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTGTCTCCTGTAGGACGTaGATGATGTCCTCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVVSCRT*MMSSLG
Trigger: TCCAAGAGAGGACATCATCAACGTCCTACAGGAGAC...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCATCTGGACACCTCCTGTaGATGACTTCCTTGACAACG +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPSGHLL*MTSLTT
Trigger: CGTTGTCAAGGAAGTCATCAACAGGAGGTGTCCAGA...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACATTCACAGAGCTGGGTaGTGGCTCTATGTCAGAACC +
Preference number: 5 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHIHRAG*WLYVRT
Trigger: GGTTCTGACATAGAGCCACAACCCAGCTCTGTGAAT...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGATCTCTGGGACTGTCTaGTCTCTGGACAAACTCCTC +
Preference number: 5 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLISGTV*SLDKLL
Trigger: GAGGAGTTTGTCCAGAGACAAGACAGTCCCAGAGAT...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAAACTATTCATGGGTGTaGGTGGGATCCTCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKNYSWV*VGSSFQ
Trigger: CTGGAAAGAGGATCCCACCAACACCCATGAATAGTT...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTTCTATCAGGTGGTTaGTTCCTTGGGGAGATGTAT +
Preference number: 5 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWLLSGG*FLGEMY
Trigger: ATACATCTCCCCAAGGAACAAACCACCTGATAGAAG...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTCTAACAGAAGGTGTCTaGCTGCTTGTTGGGTGCAAA +
Preference number: 5 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVLTEGV*LLVGCK
Trigger: TTTGCACCCAACAAGCAGCAAGACACCTTCTGTTAG...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTCTGTGTGCTCTGTCTaGAGTTCATTTTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGSVCSV*SSFSSR
Trigger: CCTGGATGAAAATGAACTCAAGACAGAGCACACAGA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATGTTTCATTGTACAGTaGCATCATGCTGGGGTCGTC +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSCFIVQ*HHAGVV
Trigger: GACGACCCCAGCATGATGCAACTGTACAATGAAACA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCATGTCGGTTTGTTTCATaGTACAGTTGCATCATGCTG +
Preference number: 5 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPCRFVS*YSCIML
Trigger: CAGCATGATGCAACTGTACAATGAAACAAACCGACA...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACCATATCTGAGATCGTaGCAGTGGACTGAGTATCCT +
Preference number: 5 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAPYLRS*QWTEYP
Trigger: AGGATACTCAGTCCACTGCAACGATCTCAGATATGG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGCTTCTCACTTTCACTTaGTCCATCGCCATGACCTTT +
Preference number: 5 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALLLTFT*SIAMTF
Trigger: AAAGGTCATGGCGATGGACAAAGTGAAAGTGAGAAG...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGAGCCTTGGTTTTCTTCTaGATACCCAGAACTGGGTTG +
Preference number: 5 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRALVFF*IPRTGL
Trigger: CAACCCAGTTCTGGGTATCAAGAAGAAAACCAAGGC...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAGCCTTGGTTTTCTTCTaGATACCCAGAACTGGGTTG +
Preference number: 5 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAALVFF*IPRTGL
Trigger: CAACCCAGTTCTGGGTATCAAGAAGAAAACCAAGGC...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTTCACTCCAGTTGCCTaGGTTTTCTTCTTGATACCC +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGFTPVA*VFFLIP
Trigger: GGGTATCAAGAAGAAAACCAAGGCAACTGGAGTGAA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACCTCTGGCTGCACAGTaGCAGAAATGTCATGTTCAT +
Preference number: 5 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRPLAAQ*QKCHVH
Trigger: ATGAACATGACATTTCTGCAACTGTGCAGCCAGAGG...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTCCTCTGGCTGCACAGTaGCAGAAATGTCATGTTCAT +
Preference number: 5 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCPLAAQ*QKCHVH
Trigger: ATGAACATGACATTTCTGCAACTGTGCAGCCAGAGG...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACGGATCTCTTCCTCTATaGACTCTTCACCACCGACAC +
Preference number: 5 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHGSLPL*TLHHRH
Trigger: GTGTCGGTGGTGAAGAGTCAATAGAGGAAGAGATCC...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAGGATCTCTTCCTCTATaGACTCTTCACCACCGACAC +
Preference number: 5 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIGSLPL*TLHHRH
Trigger: GTGTCGGTGGTGAAGAGTCAATAGAGGAAGAGATCC...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGATCAGGGCTGCTTTGTaGATTGTCACAGAATGGGTT +
Preference number: 5 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALIRAAL*IVTEWV
Trigger: AACCCATTCTGTGACAATCAACAAAGCAGCCCTGAT...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAGGGATCAGGGCTGCTTaGTTGATTGTCACAGAATGG +
Preference number: 5 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLGIRAA*LIVTEW
Trigger: CCATTCTGTGACAATCAACAAAGCAGCCCTGATCCC...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGAGCTTTGGGAGATATTaGCCATGCAACATCTCCTGT +
Preference number: 5 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWSFGRY*PCNISC
Trigger: ACAGGAGATGTTGCATGGCAAATATCTCCCAAAGCT...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCAGCTTTGGGAGATATTaGCCATGCAACATCTCCTGT +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGSFGRY*PCNISC
Trigger: ACAGGAGATGTTGCATGGCAAATATCTCCCAAAGCT...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCAGCCCAGCATTTCCAGTaGAGAATTATCTTCGTTCTT +
Preference number: 5 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPAQHFQ*RIIFVL
Trigger: AAGAACGAAGATAATTCTCAACTGGAAATGCTGGGC...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTGCCCAGCATTTCCAGTaGAGAATTATCTTCGTTCTT +
Preference number: 5 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSAQHFQ*RIIFVL
Trigger: AAGAACGAAGATAATTCTCAACTGGAAATGCTGGGC...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCATGGCAATGCTTGAATTaGTCATCTCACCTAGGTATG +
Preference number: 5 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPWQCLN*SSHLGM
Trigger: CATACCTAGGTGAGATGACAAATTCAAGCATTGCCA...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGTGGCTTCATTATCAGTaGGGTGGGAGAACTGACAGC +
Preference number: 5 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLWLHYQ*GGRTDS
Trigger: GCTGTCAGTTCTCCCACCCAACTGATAATGAAGCCA...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTCAGTCTCTTGCTTaGCTTCAGAATCGTGACATA +
Preference number: 5 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSSQSLA*LQNRDI
Trigger: TATGTCACGATTCTGAAGCAAAGCAAGAGACTGAGA...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCCATCTCAGTCTCTTGCTTaGCTTCAGAATCGTGACATA +
Preference number: 5 (lower is better)
Translates to: MFQQNHEPEKHPLLPAWPSQSLA*LQNRDI
Trigger: TATGTCACGATTCTGAAGCAAAGCAAGAGACTGAGA...TGGCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAGAATCGAGTTCTGCATaGGATGGGACAAACTCCCGT +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPESSSA*DGTNSR
Trigger: ACGGGAGTTTGTCCCATCCAATGCAGAACTCGATTC...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATTGGAGGCAGCACAGTaGCGTTTTCAGAATCGAGTT +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSLEAAQ*RFQNRV
Trigger: AACTCGATTCTGAAAACGCAACTGTGCTGCCTCCAA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTCTGCTTGATAGCCAATaGGAGGCAGCACAGTTGCGT +
Preference number: 5 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSLLDSQ*EAAQLR
Trigger: ACGCAACTGTGCTGCCTCCAATTGGCTATCAAGCAG...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAGCCCTTTATGTCTGCTaGATAGCCAATTGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPALYVC*IANWRQ
Trigger: CTGCCTCCAATTGGCTATCAAGCAGACATAAAGGGC...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAGCCCTTTATGTCTGCTaGATAGCCAATTGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEALYVC*IANWRQ
Trigger: CTGCCTCCAATTGGCTATCAAGCAGACATAAAGGGC...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCAACTGGTTCCAAAATaGGTGCCATATCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVQLVPK*VPYLGW
Trigger: CCAGCCCAGATATGGCACCAATTTTGGAACCAGTTG...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCACAACTGGTTCCAAAATaGGTGCCATATCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPQLVPK*VPYLGW
Trigger: CCAGCCCAGATATGGCACCAATTTTGGAACCAGTTG...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACATCAAACAAAGCTCTaGCACCAGGCTGACTTTCAG +
Preference number: 5 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAHQTKL*HQADFQ
Trigger: CTGAAAGTCAGCCTGGTGCAAGAGCTTTGTTTGATG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATCACAGGTCTCTGGCTTaGAGTGTGAATTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYHRSLA*SVNFLH
Trigger: GTGAAGAAAATTCACACTCAAAGCCAGAGACCTGTG...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTATGTGTCTGGGAAGCTaGCTAACTGAGTTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVMCLGS*LTEFPA
Trigger: TGCAGGGAACTCAGTTAGCAAGCTTCCCAGACACAT...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAATGTGTCTGGGAAGCTaGCTAACTGAGTTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEMCLGS*LTEFPA
Trigger: TGCAGGGAACTCAGTTAGCAAGCTTCCCAGACACAT...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACATCCAACTCTGGTCTaGTGCAGGGCTTTCAAAAGA +
Preference number: 5 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPAHPTLV*CRAFKR
Trigger: TCTTTTGAAAGCCCTGCACAAGACCAGAGTTGGATG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACAGCATTTCCCATTCATaGTCATGGGTGACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHSISHS*SWVTAC
Trigger: GCAGGCTGTCACCCATGACAATGAATGGGAAATGCT...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAAGTAGTCCATTTGGTCTaGATATCCTGGTTCCGAGCT +
Preference number: 5 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEVVHLV*ISWFRA
Trigger: AGCTCGGAACCAGGATATCAAGACCAAATGGACTAC...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATCCTCCTTCTTGGGGTaGCACCATTCAAGTACACAA +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSSSFLG*HHSSTQ
Trigger: TTGTGTACTTGAATGGTGCAACCCCAAGAAGGAGGA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTCTGGCATCCTCCTTCTaGGGGTTGCACCATTCAAGT +
Preference number: 5 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSLASSF*GLHHSS
Trigger: ACTTGAATGGTGCAACCCCAAGAAGGAGGATGCCAG...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCTGGCATCCTCCTTCTaGGGGTTGCACCATTCAAGT +
Preference number: 5 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLLASSF*GLHHSS
Trigger: ACTTGAATGGTGCAACCCCAAGAAGGAGGATGCCAG...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATCTCTCTTCATCGTACTaGATGATGCTCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYLSSSY*MMLSGM
Trigger: CATTCCAGAGAGCATCATCAAGTACGATGAAGAGAG...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424866.1
CDS GCA 90 bp GGTGTTTCAGGAGTCAGCTCATCACCAGCAGCAGACACAAAGGTTTaGTCTCTTGAGTCCTTTTCTTTAATTTGGTCTAATTTTACAAGC +
Preference number: 5 (lower is better)
Translates to: GVSGVSSSPAADTKV*SLESFSLIWSNFTS
Trigger: GCTTGTAAAATTAGACCAAATTAAAGAAAAGGACTCAAGAGAGCAAACCTTTGTGTCTGCTGCTGGTGATGAGCTGACTCCTGAAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp AGAGAGAATAGATCCTTCACTTTGGTCCAGAGAAAGATTGATATTTaGGGCTGTGAGCTTGATTCTCCGAGGATGAGTGTCATTAAGATC +
Preference number: 5 (lower is better)
Translates to: RENRSFTLVQRKIDI*GCELDSPRMSVIKI
Trigger: GATCTTAATGACACTCATCCTCGGAGAATCAAGCTCACAGCCCCAAATATCAATCTTTCTCTGGACCAAAGTGAAGGATCTATTCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
ENST00000466266.6
ENST00000480674.1
ENST00000488346.5
CDS CCA 90 bp CCTGATGTGTCCCTGAATGTTCAGAATATTTGCCTGTTTCAGGACTaGATAAAGAGGAAAAGGAATCACCATCAACTGAGTCATTCCAGA +
Preference number: 5 (lower is better)
Translates to: PDVSLNVQNICLFQD*IKRKRNHHQLSHSR
Trigger: TCTGGAATGACTCAGTTGATGGTGATTCCTTTTCCTCTTTATCCAGTCCTGAAACAGGCAAATATTCTGAACATTCAGGGACACATCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp TACAGGAAGTGTTCAGGCTCTCTCAGTAAATCTTCATCGATATTCTaGCCCATTACATCATATTCAAAATCACCCCACGAGGCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: YRKCSGSLSKSSSIF*PITSYSKSPHEASD
Trigger: ATCTGAAGCCTCGTGGGGTGATTTTGAATATGATGTAATGGGCCAGAATATCGATGAAGATTTACTGAGAGAGCCTGAACACTTCCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAATGGTTCCCAGAGTGAATAGATCCTTCACTTaGGTCCAGAGAAAGATTGAT +
Preference number: 5 (lower is better)
Translates to: CQLLCNRRHWRLRMVPRVNRSFT*VQRKID
Trigger: ATCAATCTTTCTCTGGACCAAAGTGAAGGATCTATT...CACTCTGGGAACCATTCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGTCAATGCGCTGCTCTaGTTCTCCAATGACCACTGT +
Preference number: 5 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLVNALL*FSNDHC
Trigger: ACAGTGGTCATTGGAGAACAAGAGCAGCGCATTGAC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAGTTTGCAGCCTCATTaGTCCGTTCTGTTAGAGAAA +
Preference number: 5 (lower is better)
Translates to: ATALKQTFSLLDTIFCANSLQPH*SVLLEK
Trigger: TTTCTCTAACAGAACGGACAAATGAGGCTGCAAACT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTAGTTTGCAGCCTCATTaGTCCGTTCTGTTAGAGAAA +
Preference number: 5 (lower is better)
Translates to: SHTSENVLESNPIEHCMASLQPH*SVLLEK
Trigger: TTTCTCTAACAGAACGGACAAATGAGGCTGCAAACT...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATGGGAGAGGTGTAATTaGGGCTTTCAAAAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIWERCN*GFQKWR
Trigger: CCTCCACTTTTGAAAGCCCAAATTACACCTCTCCCA...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTTGGGAGAGGTGTAATTaGGGCTTTCAAAAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVWERCN*GFQKWR
Trigger: CCTCCACTTTTGAAAGCCCAAATTACACCTCTCCCA...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTCTATGCCCTCAGGTTaGCACCACTACACTGAACAC +
Preference number: 5 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLSMPSG*HHYTEH
Trigger: GTGTTCAGTGTAGTGGTGCAAACCTGAGGGCATAGA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCGCTGAAACAAAATCATaGGGACAAATGCCCATAATT +
Preference number: 5 (lower is better)
Translates to: KVVTSSFYPGLQISWTALAETKS*GQMPII
Trigger: AATTATGGGCATTTGTCCCAATGATTTTGTTTCAGC...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTACCTTCTCCAAGCGTTaGCTTCGATTCAGTTTAGAT +
Preference number: 5 (lower is better)
Translates to: SHTSENVLESNPIEHCMATFSKR*LRFSLD
Trigger: ATCTAAACTGAATCGAAGCAAACGCTTGGAGAAGGT...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAGCTGATTCTAAAGTTTaGTCTTCACTCGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKADSKV*SSLAST
Trigger: TGTGCTGGCGAGTGAAGACAAAACTTTAGAATCAGC...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCACCGGATTAATGACTTaGACAACTGCTGATTCTAAA +
Preference number: 5 (lower is better)
Translates to: KVVTSSFYPGLQISWTALTGLMT*TTADSK
Trigger: TTTAGAATCAGCAGTTGTCAAAGTCATTAATCCGGT...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTCTGGACACCTCCTGTaGATGACTTCCTTGACAACG +
Preference number: 5 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLSGHLL*MTSLTT
Trigger: CGTTGTCAAGGAAGTCATCAACAGGAGGTGTCCAGA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCATCCACAAGGCTATCTTaGCCAGCCCCTGACAAAAGT +
Preference number: 5 (lower is better)
Translates to: STKTSLCGCVSVPLYLSASTRLS*PAPDKS
Trigger: ACTTTTGTCAGGGGCTGGCAAAGATAGCCTTGTGGA...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTATCTCTGGGACTGTCTaGTCTCTGGACAAACTCCTC +
Preference number: 5 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSISGTV*SLDKLL
Trigger: GAGGAGTTTGTCCAGAGACAAGACAGTCCCAGAGAT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTTGTGACCTGTGTCAGTaGCTTTTTGGGTCATATCTT +
Preference number: 5 (lower is better)
Translates to: SHTSENVLESNPIEHCMACDLCQ*LFGSYL
Trigger: AAGATATGACCCAAAAAGCAACTGACACAGGTCACA...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGTGTGACCTGTGTCAGTaGCTTTTTGGGTCATATCTT +
Preference number: 5 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWCDLCQ*LFGSYL
Trigger: AAGATATGACCCAAAAAGCAACTGACACAGGTCACA...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATCCTATCAATGGAGCTaGGCTTATGCTCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPASYQWS*AYALSM
Trigger: CATGGAAAGAGCATAAGCCAAGCTCCATTGATAGGA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTCTTCTATCAGGTGGTTaGTTCCTTGGGGAGATGTAT +
Preference number: 5 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCLLSGG*FLGEMY
Trigger: ATACATCTCCCCAAGGAACAAACCACCTGATAGAAG...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTCTTCTATCAGGTGGTTaGTTCCTTGGGGAGATGTAT +
Preference number: 5 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVLLSGG*FLGEMY
Trigger: ATACATCTCCCCAAGGAACAAACCACCTGATAGAAG...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAGTGTCTTGCTGCTTGTaGGGTGCAAATTCCAGGTAT +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPVSCCL*GANSRY
Trigger: ATACCTGGAATTTGCACCCAACAAGCAGCAAGACAC...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAGTGTCTTGCTGCTTGTaGGGTGCAAATTCCAGGTAT +
Preference number: 5 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIVSCCL*GANSRY
Trigger: ATACCTGGAATTTGCACCCAACAAGCAGCAAGACAC...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATATCTCACTGGGTGAATaGTCCAGTAGTTCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: ATALKQTFSLLDTIFCANISLGE*SSSSEE
Trigger: TTCTTCAGAACTACTGGACAATTCACCCAGTGAGAT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTTCTGGAGCTGCTTCATaGTTTATCTCACTGGGTGAA +
Preference number: 5 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCSGAAS*FISLGE
Trigger: TTCACCCAGTGAGATAAACAATGAAGCAGCTCCAGA...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTTTAGCAAATGGCTaGTGTTCAGTTTCCTTTTCG +
Preference number: 5 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSSLANG*CSVSFS
Trigger: CGAAAAGGAAACTGAACACAAGCCATTTGCTAAAGA...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTTGTCGGTTTGTTTCATaGTACAGTTGCATCATGCTG +
Preference number: 5 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTCRFVS*YSCIML
Trigger: CAGCATGATGCAACTGTACAATGAAACAAACCGACA...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATACCATATCTGAGATCGTaGCAGTGGACTGAGTATCCT +
Preference number: 5 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIPYLRS*QWTEYP
Trigger: AGGATACTCAGTCCACTGCAACGATCTCAGATATGG...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTCCCAGTCCAAATCATaGTCCATATCTGAGATCGTT +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGSQSKS*SISEIV
Trigger: AACGATCTCAGATATGGACAATGATTTGGACTGGGA...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCCCAATCTACCTGATTaGCTTCCTGATACTCCAAGC +
Preference number: 5 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVPNLPD*LPDTPS
Trigger: GCTTGGAGTATCAGGAAGCAAATCAGGTAGATTGGG...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATACCCAATCTACCTGATTaGCTTCCTGATACTCCAAGC +
Preference number: 5 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIPNLPD*LPDTPS
Trigger: GCTTGGAGTATCAGGAAGCAAATCAGGTAGATTGGG...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAGCCTTGGTTTTCTTCTaGATACCCAGAACTGGGTTG +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPALVFF*IPRTGL
Trigger: CAACCCAGTTCTGGGTATCAAGAAGAAAACCAAGGC...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAGCCTTGGTTTTCTTCTaGATACCCAGAACTGGGTTG +
Preference number: 5 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIALVFF*IPRTGL
Trigger: CAACCCAGTTCTGGGTATCAAGAAGAAAACCAAGGC...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AATTTGACAACTAAAATAAAGTTGACGTGGATTAGAAAGCCCGGCTTCCCTTTGCCTCTGGCTGCACAGTaGCAGAAATGTCATGTTCAT +
Preference number: 5 (lower is better)
Translates to: NLTTKIKLTWIRKPGFPLPLAAQ*QKCHVH
Trigger: ATGAACATGACATTTCTGCAACTGTGCAGCCAGAGG...CAAAGGGAAGCCGGGCTTTCTAATCCACGTCAACTTTATTTTAGTTGTCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTATCAGGGCTGCTTTGTaGATTGTCACAGAATGGGTT +
Preference number: 5 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVIRAAL*IVTEWV
Trigger: AACCCATTCTGTGACAATCAACAAAGCAGCCCTGAT...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAATCAGGGCTGCTTTGTaGATTGTCACAGAATGGGTT +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSIRAAL*IVTEWV
Trigger: AACCCATTCTGTGACAATCAACAAAGCAGCCCTGAT...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGGGATCAGGGCTGCTTaGTTGATTGTCACAGAATGG +
Preference number: 5 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEGIRAA*LIVTEW
Trigger: CCATTCTGTGACAATCAACAAAGCAGCCCTGATCCC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTTTGGGAACGAAGCTTaGGGAGATATTTGCCATGCA +
Preference number: 5 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVFGNEA*GDICHA
Trigger: TGCATGGCAAATATCTCCCAAAGCTTCGTTCCCAAA...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGCCCAGCATTTCCAGTaGAGAATTATCTTCGTTCTT +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGAQHFQ*RIIFVL
Trigger: AAGAACGAAGATAATTCTCAACTGGAAATGCTGGGC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAACTGGGTCTGGCTGCCTaGGTTGAATGTTCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQLGLAA*VECSRV
Trigger: AACTCTGGAACATTCAACCAAGGCAGCCAGACCCAG...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATTGGCAATGCTTGAATTaGTCATCTCACCTAGGTATG +
Preference number: 5 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYWQCLN*SSHLGM
Trigger: CATACCTAGGTGAGATGACAAATTCAAGCATTGCCA...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAGTGCTTCTCAGTCTCTaGCTTTGCTTCAGAATCGTG +
Preference number: 5 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIVLLSL*LCFRIV
Trigger: CACGATTCTGAAGCAAAGCAAGAGACTGAGAAGCAC...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCATTGGAGGCAGCACAGTaGCGTTTTCAGAATCGAGTT +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPLEAAQ*RFQNRV
Trigger: AACTCGATTCTGAAAACGCAACTGTGCTGCCTCCAA...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTTTCTGGAGTTGGCTCTaGGTGAGTTACAAAAATGCT +
Preference number: 5 (lower is better)
Translates to: SHTSENVLESNPIEHCMAFWSWL*VSYKNA
Trigger: AGCATTTTTGTAACTCACCAAGAGCCAACTCCAGAA...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAACCCAGCTTCCTCTATaGTTTCAGCACTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQTQLPL*FQHSGQ
Trigger: CTGCCCAGAGTGCTGAAACAATAGAGGAAGCTGGGT...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAACTTCCCAGTCAACGTTaGATGGAGACAAAATGTTGG +
Preference number: 5 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKLPSQR*METKCW
Trigger: CCAACATTTTGTCTCCATCAAACGTTGACTGGGAAG...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTCTTCCCAGTCAACGTTaGATGGAGACAAAATGTTGG +
Preference number: 5 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVLPSQR*METKCW
Trigger: CCAACATTTTGTCTCCATCAAACGTTGACTGGGAAG...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGAATTCTGATATTTCCTaGCTGGCACCATTTGGTGGT +
Preference number: 5 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALNSDIS*LAPFGG
Trigger: ACCACCAAATGGTGCCAGCAAGGAAATATCAGAATT...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATAATTCTGATATTTCCTaGCTGGCACCATTTGGTGGT +
Preference number: 5 (lower is better)
Translates to: GSAKWKKVTSALSLSGRYNSDIS*LAPFGG
Trigger: ACCACCAAATGGTGCCAGCAAGGAAATATCAGAATT...ATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTAATTCTGATATTTCCTaGCTGGCACCATTTGGTGGT +
Preference number: 5 (lower is better)
Translates to: SHTSENVLESNPIEHCMANSDIS*LAPFGG
Trigger: ACCACCAAATGGTGCCAGCAAGGAAATATCAGAATT...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCATCCAACTCTGGTCTaGTGCAGGGCTTTCAAAAGA +
Preference number: 5 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVHPTLV*CRAFKR
Trigger: TCTTTTGAAAGCCCTGCACAAGACCAGAGTTGGATG...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAAGCATTTCCCATTCATaGTCATGGGTGACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRSISHS*SWVTAC
Trigger: GCAGGCTGTCACCCATGACAATGAATGGGAAATGCT...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACTGACAGTAGTCCATTaGGTCTTGATATCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPALTVVH*VLISWF
Trigger: GAACCAGGATATCAAGACCAAATGGACTACTGTCAG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTCCTCCTTCTTGGGGTaGCACCATTCAAGTACACAA +
Preference number: 5 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHSSFLG*HHSSTQ
Trigger: TTGTGTACTTGAATGGTGCAACCCCAAGAAGGAGGA...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCATCCTCCTTCTTGGGGTaGCACCATTCAAGTACACAA +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPSSFLG*HHSSTQ
Trigger: TTGTGTACTTGAATGGTGCAACCCCAAGAAGGAGGA...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAACTGGCATCCTCCTTCTaGGGGTTGCACCATTCAAGT +
Preference number: 5 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQLASSF*GLHHSS
Trigger: ACTTGAATGGTGCAACCCCAAGAAGGAGGATGCCAG...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAGTTCTTCATCCAGTTaGATGATGCTCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: ATALKQTFSLLDTIFCANSSSSS*MMLSGM
Trigger: CATTCCAGAGAGCATCATCAAACTGGATGAAGAACT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS-3UTR CAA 90 bp TCACACACCTCAGAGAATGTCTTAGAGAGTAACCCCATAGAACATTGTATGGCTAGTTCTTCATCCAGTTaGATGATGCTCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: SHTSENVLESNPIEHCMASSSSS*MMLSGM
Trigger: CATTCCAGAGAGCATCATCAAACTGGATGAAGAACT...AGCCATACAATGTTCTATGGGGTTACTCTCTAAGACATTCTCTGAGGTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS-3UTR CAA 90 bp AAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTGGACAGCTCTCCGTGTTAATGAAGTATaGAAATGGAAGGTCCTACTT +
Preference number: 5 (lower is better)
Translates to: KVVTSSFYPGLQISWTALRVNEV*KWKVLL
Trigger: AAGTAGGACCTTCCATTTCAATACTTCATTAACACG...GAGAGCTGTCCAGGATATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp CTGCTGCCAACAAGTGTTATCGATAACTTCCCTTCATCATTTAGCTaGTGCAGGTTAATTTCATCCCGGAATATGTGGAATGATTCGGAA +
Preference number: 5 (lower is better)
Translates to: LLPTSVIDNFPSSFS*CRLISSRNMWNDSE
Trigger: TTCCGAATCATTCCACATATTCCGGGATGAAATTAACCTGCATCAGCTAAATGATGAAGGGAAGTTATCGATAACACTTGTTGGCAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376713.3
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
ENST00000489555.1
ENST00000492157.5
CDS-3UTR CAA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGATGGTCCAGAGAAAGATaGATATTTGGGGCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRWSRER*IFGAVS
Trigger: GCTCACAGCCCCAAATATCAATCTTTCTCTGGACCA...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTCTATCTAAATACAAATaGGGGTGGAGTAGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTLSKYK*GWSRKG
Trigger: TCCTTTCCTACTCCACCCCAATTTGTATTTAGATAG...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCTATCTAAATACAAATaGGGGTGGAGTAGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWLSKYK*GWSRKG
Trigger: TCCTTTCCTACTCCACCCCAATTTGTATTTAGATAG...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCACCCCTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACAACAAGATACTCGCTaGAAAGGATCAAGAGGAGAA +
Preference number: 5 (lower is better)
Translates to: SPLHFYFCQLLCNRRHWRQQDTR*KGSRGE
Trigger: TTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTG...TCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAGGGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTGCTGAAACAAAATCATaGGGACAAATGCCCATAATT +
Preference number: 5 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSAETKS*GQMPII
Trigger: AATTATGGGCATTTGTCCCAATGATTTTGTTTCAGC...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGATTCAGTTTAGATTaGGCGCGTTGCAAAAATTCT +
Preference number: 5 (lower is better)
Translates to: DMFQQNHEPEKHPLLPAWRFSLD*ARCKNS
Trigger: AGAATTTTTGCAACGCGCCAAATCTAAACTGAATCG...CCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAGCTGATTCTAAAGTTTaGTCTTCACTCGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPADSKV*SSLAST
Trigger: TGTGCTGGCGAGTGAAGACAAAACTTTAGAATCAGC...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCATGGTCATCCACTaGAAAAGAATGCTACCTCTG +
Preference number: 5 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQISMVIH*KRMLPL
Trigger: CAGAGGTAGCATTCTTTTCAAGTGGATGACCATGGA...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTAGCCTGGTTAGAATCATaGAGATCTGGAGGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLAWLES*RSGGFS
Trigger: AGAGAACCCTCCAGATCTCAATGATTCTAACCAGGC...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAATCTGACAGGTCACTGTaGGGGAAGAAGTCATCTGCT +
Preference number: 5 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQSDRSL*GKKSSA
Trigger: AGCAGATGACTTCTTCCCCAACAGTGACCTGTCAGA...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTCTGACAGGTCACTGTaGGGGAAGAAGTCATCTGCT +
Preference number: 5 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLSDRSL*GKKSSA
Trigger: AGCAGATGACTTCTTCCCCAACAGTGACCTGTCAGA...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCCTATCAATGGAGCTaGGCTTATGCTCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQISYQWS*AYALSM
Trigger: CATGGAAAGAGCATAAGCCAAGCTCCATTGATAGGA...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACTCCTATCAATGGAGCTaGGCTTATGCTCTTTCCATG +
Preference number: 5 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHSYQWS*AYALSM
Trigger: CATGGAAAGAGCATAAGCCAAGCTCCATTGATAGGA...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGCTAACAGAAGGTGTCTaGCTGCTTGTTGGGTGCAAA +
Preference number: 5 (lower is better)
Translates to: RTYNSTRYSLERIKRRKELTEGV*LLVGCK
Trigger: TTTGCACCCAACAAGCAGCAAGACACCTTCTGTTAG...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAATCTGGAGCTGCTTCATaGTTTATCTCACTGGGTGAA +
Preference number: 5 (lower is better)
Translates to: WKKVTSALSLSGRYVSTESGAAS*FISLGE
Trigger: TTCACCCAGTGAGATAAACAATGAAGCAGCTCCAGA...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATATCTGGAGCTGCTTCATaGTTTATCTCACTGGGTGAA +
Preference number: 5 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHISGAAS*FISLGE
Trigger: TTCACCCAGTGAGATAAACAATGAAGCAGCTCCAGA...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGATGTTTCATTGTACAGTaGCATCATGCTGGGGTCGTC +
Preference number: 5 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRCFIVQ*HHAGVV
Trigger: GACGACCCCAGCATGATGCAACTGTACAATGAAACA...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTTGTTTCATTGTACAGTaGCATCATGCTGGGGTCGTC +
Preference number: 5 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLCFIVQ*HHAGVV
Trigger: GACGACCCCAGCATGATGCAACTGTACAATGAAACA...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGCCATATCTGAGATCGTaGCAGTGGACTGAGTATCCT +
Preference number: 5 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEPYLRS*QWTEYP
Trigger: AGGATACTCAGTCCACTGCAACGATCTCAGATATGG...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTTCCCAGTCCAAATCATaGTCCATATCTGAGATCGTT +
Preference number: 5 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCSQSKS*SISEIV
Trigger: AACGATCTCAGATATGGACAATGATTTGGACTGGGA...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGCATGTATCCTTCTGTTaGACCATCACTGGGGATTGC +
Preference number: 5 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEHVSFC*TITGDC
Trigger: GCAATCCCCAGTGATGGTCAAACAGAAGGATACATG...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTACATGTATCCTTCTGTTaGACCATCACTGGGGATTGC +
Preference number: 5 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLHVSFC*TITGDC
Trigger: GCAATCCCCAGTGATGGTCAAACAGAAGGATACATG...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACTTCTCACTTTCACTTaGTCCATCGCCATGACCTTT +
Preference number: 5 (lower is better)
Translates to: WKKVTSALSLSGRYVSTELLTFT*SIAMTF
Trigger: AAAGGTCATGGCGATGGACAAAGTGAAAGTGAGAAG...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATACTTCTCACTTTCACTTaGTCCATCGCCATGACCTTT +
Preference number: 5 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQILLTFT*SIAMTF
Trigger: AAAGGTCATGGCGATGGACAAAGTGAAAGTGAGAAG...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGGCAAGAGAGCTGATTTaGCCTGATTTAATGCAGATT +
Preference number: 5 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALARELI*PDLMQI
Trigger: AATCTGCATTAAATCAGGCAAAATCAGCTCTCTTGC...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGCAAGAGAGCTGATTTaGCCTGATTTAATGCAGATT +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGARELI*PDLMQI
Trigger: AATCTGCATTAAATCAGGCAAAATCAGCTCTCTTGC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTACTTGGGGTGAATGTACATGGTAGCTTTTCCCTAGCACATGCAATTAAATTATTTCATGGGTATCTTTaGGCTGCAGGTTATCTGCGG +
Preference number: 5 (lower is better)
Translates to: LLGVNVHGSFSLAHAIKLFHGYL*AAGYLR
Trigger: CCGCAGATAACCTGCAGCCAAAAGATACCCATGAAA...TAATTTAATTGCATGTGCTAGGGAAAAGCTACCATGTACATTCACCCCAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATATTCACTCCAGTTGCCTaGGTTTTCTTCTTGATACCC +
Preference number: 5 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIFTPVA*VFFLIP
Trigger: GGGTATCAAGAAGAAAACCAAGGCAACTGGAGTGAA...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTATTCACTCCAGTTGCCTaGGTTTTCTTCTTGATACCC +
Preference number: 5 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLFTPVA*VFFLIP
Trigger: GGGTATCAAGAAGAAAACCAAGGCAACTGGAGTGAA...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGGAATGTTCAGAATATTaGCCTGTTTCAGGACTGGAT +
Preference number: 5 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALECSEY*PVSGLD
Trigger: ATCCAGTCCTGAAACAGGCAAATATTCTGAACATTC...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGAATGTTCAGAATATTaGCCTGTTTCAGGACTGGAT +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGECSEY*PVSGLD
Trigger: ATCCAGTCCTGAAACAGGCAAATATTCTGAACATTC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAATCAGGGCTGCTTTGTaGATTGTCACAGAATGGGTT +
Preference number: 5 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLIRAAL*IVTEWV
Trigger: AACCCATTCTGTGACAATCAACAAAGCAGCCCTGAT...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAAGCTTTGGGAGATATTaGCCATGCAACATCTCCTGT +
Preference number: 5 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQISFGRY*PCNISC
Trigger: ACAGGAGATGTTGCATGGCAAATATCTCCCAAAGCT...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GAAGCAATGAGGTCAGAGAAACTCAATCACCTGTGCAAAGATGTCGACTTTAAAAATTATCTTCGTTCTTaGGGAACGAAGCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: EAMRSEKLNHLCKDVDFKNYLRS*GTKLWE
Trigger: CTCCCAAAGCTTCGTTCCCAAAGAACGAAGATAATT...TTTAAAGTCGACATCTTTGCACAGGTGATTGAGTTTCTCTGACCTCATTGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTTGGCAATGCTTGAATTaGTCATCTCACCTAGGTATG +
Preference number: 5 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCWQCLN*SSHLGM
Trigger: CATACCTAGGTGAGATGACAAATTCAAGCATTGCCA...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAATTTAGAATGGCACCAGGTAGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTTTCTGTGGCAATGCTaGAATTTGTCATCTCACCTA +
Preference number: 5 (lower is better)
Translates to: KFRMAPGSAKWKKVTSALFLWQC*NLSSHL
Trigger: TAGGTGAGATGACAAATTCAAGCATTGCCACAGAAA...CAGGGCTGATGTTACCTTTTTCCACTTTGCACTACCTGGTGCCATTCTAAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATCTCAGTCTCTTGCTTaGCTTCAGAATCGTGACATA +
Preference number: 5 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPASQSLA*LQNRDI
Trigger: TATGTCACGATTCTGAAGCAAAGCAAGAGACTGAGA...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGTGCTTCTCAGTCTCTaGCTTTGCTTCAGAATCGTG +
Preference number: 5 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLVLLSL*LCFRIV
Trigger: CACGATTCTGAAGCAAAGCAAGAGACTGAGAAGCAC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAGTGCTTCTCAGTCTCTaGCTTTGCTTCAGAATCGTG +
Preference number: 5 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAVLLSL*LCFRIV
Trigger: CACGATTCTGAAGCAAAGCAAGAGACTGAGAAGCAC...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAGAATCGAGTTCTGCATaGGATGGGACAAACTCCCGT +
Preference number: 5 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQESSSA*DGTNSR
Trigger: ACGGGAGTTTGTCCCATCCAATGCAGAACTCGATTC...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGTTGGAGGCAGCACAGTaGCGTTTTCAGAATCGAGTT +
Preference number: 5 (lower is better)
Translates to: RTYNSTRYSLERIKRRKELEAAQ*RFQNRV
Trigger: AACTCGATTCTGAAAACGCAACTGTGCTGCCTCCAA...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAGCCCTTTATGTCTGCTaGATAGCCAATTGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQALYVC*IANWRQ
Trigger: CTGCCTCCAATTGGCTATCAAGCAGACATAAAGGGC...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTCCACACTGAGCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTGTAAACCTGTACTGTaGTCACCGTTTATTTCAGAA +
Preference number: 5 (lower is better)
Translates to: FHTELLPSNKLSHSLTLSCKPVL*SPFISE
Trigger: TTCTGAAATAAACGGTGACAACAGTACAGGTTTACA...AGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGCTCAGTGTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGACATCAAACAAAGCTCTaGCACCAGGCTGACTTTCAG +
Preference number: 5 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRHQTKL*HQADFQ
Trigger: CTGAAAGTCAGCCTGGTGCAAGAGCTTTGTTTGATG...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCACACAGGTCTCTGGCTTaGAGTGTGAATTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPHRSLA*SVNFLH
Trigger: GTGAAGAAAATTCACACTCAAAGCCAGAGACCTGTG...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATACACAGGTCTCTGGCTTaGAGTGTGAATTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIHRSLA*SVNFLH
Trigger: GTGAAGAAAATTCACACTCAAAGCCAGAGACCTGTG...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGAGTAGTCCATTTGGTCTaGATATCCTGGTTCCGAGCT +
Preference number: 5 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRVVHLV*ISWFRA
Trigger: AGCTCGGAACCAGGATATCAAGACCAAATGGACTAC...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACTGACAGTAGTCCATTaGGTCTTGATATCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: WKKVTSALSLSGRYVSTELTVVH*VLISWF
Trigger: GAACCAGGATATCAAGACCAAATGGACTACTGTCAG...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGTCCTCCTTCTTGGGGTaGCACCATTCAAGTACACAA +
Preference number: 5 (lower is better)
Translates to: RTYNSTRYSLERIKRRKESSFLG*HHSSTQ
Trigger: TTGTGTACTTGAATGGTGCAACCCCAAGAAGGAGGA...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTAGTTCTTCATCCAGTTaGATGATGCTCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCSSSSS*MMLSGM
Trigger: CATTCCAGAGAGCATCATCAAACTGGATGAAGAACT...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS TCA 90 bp AAAGGTCGTGTCACAGCAAGGATTGTTCTGATGAACCAAGATGGATaGACAATGATGAATGATTTCAAATTCTTCCTCAACCGTCTGTCA +
Preference number: 5 (lower is better)
Translates to: KGRVTARIVLMNQDG*TMMNDFKFFLNRLS
Trigger: TGACAGACGGTTGAGGAAGAATTTGAAATCATTCATCATTGTTCATCCATCTTGGTTCATCAGAACAATCCTTGCTGTGACACGACCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTACTGCCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATAATAGATCCTTCACTTaGGTCCAGAGAAAGATTGAT +
Preference number: 5 (lower is better)
Translates to: ATALKQTFSLLDTIFCANNRSFT*VQRKID
Trigger: ATCAATCTTTCTCTGGACCAAAGTGAAGGATCTATT...ATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGGCAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACTATCTAAATACAAATaGGGGTGGAGTAGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPALSKYK*GWSRKG
Trigger: TCCTTTCCTACTCCACCCCAATTTGTATTTAGATAG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAAGTTTGCAGCCTCATTaGTCCGTTCTGTTAGAGAAA +
Preference number: 5 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHISLQPH*SVLLEK
Trigger: TTTCTCTAACAGAACGGACAAATGAGGCTGCAAACT...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAATGTTGCTGTGTCTGTTaGGCTATAACAAGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQCCCVC*AITRAL
Trigger: GAGGGCTCTTGTTATAGCCAAACAGACACAGCAACA...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp ATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCATGGCGCTGAAACAAAATCATaGGGACAAATGCCCATAATT +
Preference number: 5 (lower is better)
Translates to: ICFNRTMNQKSILFFQHGAETKS*GQMPII
Trigger: AATTATGGGCATTTGTCCCAATGATTTTGTTTCAGC...GCCATGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCCCTTAACTACAGATCTATAGGAGAAATGCAAAGCAGTTCCCAGAAGTCAGAATTTAGATTTGGCGCGTaGCAAAAATTCTTCCATGTC +
Preference number: 5 (lower is better)
Translates to: SLNYRSIGEMQSSSQKSEFRFGA*QKFFHV
Trigger: GACATGGAAGAATTTTTGCAACGCGCCAAATCTAAA...TTCTGACTTCTGGGAACTGCTTTGCATTTCTCCTATAGATCTGTAGTTAAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTCGATTCAGTTTAGATTaGGCGCGTTGCAAAAATTCT +
Preference number: 5 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCRFSLD*ARCKNS
Trigger: AGAATTTTTGCAACGCGCCAAATCTAAACTGAATCG...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTACCGGATTAATGACTTaGACAACTGCTGATTCTAAA +
Preference number: 5 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTTGLMT*TTADSK
Trigger: TTTAGAATCAGCAGTTGTCAAAGTCATTAATCCGGT...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCATCTGTGTGCTCTGTCTaGAGTTCATTTTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: STKTSLCGCVSVPLYLSASVCSV*SSFSSR
Trigger: CCTGGATGAAAATGAACTCAAGACAGAGCACACAGA...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGTGCAAAAGTGTGAGTaGTCGGTTTGTTTCATTGTA +
Preference number: 5 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVVQKCE*SVCFIV
Trigger: TACAATGAAACAAACCGACAACTCACACTTTTGCAC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAAATCCCAAATACTGTTaGCAATTAGCTGCCCACTTT +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSNPKYC*QLAAHF
Trigger: AAAGTGGGCAGCTAATTGCAAACAGTATTTGGGATT...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAACCTCTGGCTGCACAGTaGCAGAAATGTCATGTTCAT +
Preference number: 5 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQPLAAQ*QKCHVH
Trigger: ATGAACATGACATTTCTGCAACTGTGCAGCCAGAGG...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAATGGCAATGCTTGAATTaGTCATCTCACCTAGGTATG +
Preference number: 5 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEWQCLN*SSHLGM
Trigger: CATACCTAGGTGAGATGACAAATTCAAGCATTGCCA...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATTTCTGTGGCAATGCTaGAATTTGTCATCTCACCTA +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSFLWQC*NLSSHL
Trigger: TAGGTGAGATGACAAATTCAAGCATTGCCACAGAAA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAAGGCTTCATTTTGGCAATTGCAACCTAAGCAGTGATTTTGTGGCTAGGACTTGTAAACCTGTACTGTaGTCACCGTTTATTTCAGAA +
Preference number: 5 (lower is better)
Translates to: RRLHFGNCNLSSDFVARTCKPVL*SPFISE
Trigger: TTCTGAAATAAACGGTGACAACAGTACAGGTTTACA...AGTCCTAGCCACAAAATCACTGCTTAGGTTGCAATTGCCAAAATGAAGCCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTATTCTGGAGTTGGCTCTaGGTGAGTTACAAAAATGCT +
Preference number: 5 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLFWSWL*VSYKNA
Trigger: AGCATTTTTGTAACTCACCAAGAGCCAACTCCAGAA...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGCTTCCCAGTCAACGTTaGATGGAGACAAAATGTTGG +
Preference number: 5 (lower is better)
Translates to: RTYNSTRYSLERIKRRKELPSQR*METKCW
Trigger: CCAACATTTTGTCTCCATCAAACGTTGACTGGGAAG...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCAAATTCTGATATTTCCTaGCTGGCACCATTTGGTGGT +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPNSDIS*LAPFGG
Trigger: ACCACCAAATGGTGCCAGCAAGGAAATATCAGAATT...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CTTCATTTTTATTTCTGCCAGCTTCTTTGTAATAGGAGACACTGGAGACTAAGACACAGGTCTCTGGCTTaGAGTGTGAATTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: LHFYFCQLLCNRRHWRLRHRSLA*SVNFLH
Trigger: GTGAAGAAAATTCACACTCAAAGCCAGAGACCTGTG...TCTTAGTCTCCAGTGTCTCCTATTACAAAGAAGCTGGCAGAAATAAAAATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCATGCAGCCCTGTTTCTTaGGAACCTACATACAATTCT +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPCSPVS*EPTYNS
Trigger: AGAATTGTATGTAGGTTCCAAAGAAACAGGGCTGCA...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTATGCAGCCCTGTTTCTTaGGAACCTACATACAATTCT +
Preference number: 5 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLCSPVS*EPTYNS
Trigger: AGAATTGTATGTAGGTTCCAAAGAAACAGGGCTGCA...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTCCTCCTTCTTGGGGTaGCACCATTCAAGTACACAA +
Preference number: 5 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLSSFLG*HHSSTQ
Trigger: TTGTGTACTTGAATGGTGCAACCCCAAGAAGGAGGA...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAAGCTTCAAGTCAATATaGATGATGCTCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPASFKSI*MMLSGM
Trigger: CATTCCAGAGAGCATCATCAATATTGACTTGAAGCT...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426088.5
ENST00000443509.6
CDS CCA 90 bp CTATATTCCAAGTCAAATGTATCACAAAGAAGCAAAGGACTATCATaGACTTATCCAATGGAGAGAGTTACATTCCAGTTGCTCAGACTG +
Preference number: 5 (lower is better)
Translates to: LYSKSNVSQRSKGLS*TYPMERVTFQLLRL
Trigger: CAGTCTGAGCAACTGGAATGTAACTCTCTCCATTGGATAAGTCCATGATAGTCCTTTGCTTCTTTGTGATACATTTGACTTGGAATATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492157.5
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATCAAGTTCATCCACATaGATGTCAATTTCATCTGGA +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSSSSST*MSISSG
Trigger: TCCAGATGAAATTGACATCAATGTGGATGAACTTGA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTACTATCTAAATACAAATaGGGGTGGAGTAGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLLSKYK*GWSRKG
Trigger: TCCTTTCCTACTCCACCCCAATTTGTATTTAGATAG...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTAGTTTGCAGCCTCATTaGTCCGTTCTGTTAGAGAAA +
Preference number: 5 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSSLQPH*SVLLEK
Trigger: TTTCTCTAACAGAACGGACAAATGAGGCTGCAAACT...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGCAACAAGATACTCGCTaGAAAGGATCAAGAGGAGAA +
Preference number: 5 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEQQDTR*KGSRGE
Trigger: TTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTG...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTGCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTGCTGAAACAAAATCATaGGGACAAATGCCCATAATT +
Preference number: 5 (lower is better)
Translates to: SAKWKKVTSALSLSGRYVAETKS*GQMPII
Trigger: AATTATGGGCATTTGTCCCAATGATTTTGTTTCAGC...AACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAGCTGATTCTAAAGTTTaGTCTTCACTCGCCAGCACA +
Preference number: 5 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQADSKV*SSLAST
Trigger: TGTGCTGGCGAGTGAAGACAAAACTTTAGAATCAGC...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTGTGACCTGTGTCAGTaGCTTTTTGGGTCATATCTT +
Preference number: 5 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSCDLCQ*LFGSYL
Trigger: AAGATATGACCCAAAAAGCAACTGACACAGGTCACA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAATCTGGAGCTGCTTCATaGTTTATCTCACTGGGTGAA +
Preference number: 5 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQSGAAS*FISLGE
Trigger: TTCACCCAGTGAGATAAACAATGAAGCAGCTCCAGA...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATATCTTTAGCAAATGGCTaGTGTTCAGTTTCCTTTTCG +
Preference number: 5 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQISLANG*CSVSFS
Trigger: CGAAAAGGAAACTGAACACAAGCCATTTGCTAAAGA...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AATGGAAGGTCCTACTTTCTTGCTAAGGCTCAACTAAAATCTTTGAGGCACATAGTGCAAAAGTGTGAGTaGTCGGTTTGTTTCATTGTA +
Preference number: 5 (lower is better)
Translates to: NGRSYFLAKAQLKSLRHIVQKCE*SVCFIV
Trigger: TACAATGAAACAAACCGACAACTCACACTTTTGCAC...TATGTGCCTCAAAGATTTTAGTTGAGCCTTAGCAAGAAAGTAGGACCTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTCCCAGTCCAAATCATaGTCCATATCTGAGATCGTT +
Preference number: 5 (lower is better)
Translates to: QTFSLLDTIFCANFCSFSSQSKS*SISEIV
Trigger: AACGATCTCAGATATGGACAATGATTTGGACTGGGA...AGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCACAATCCCAAATACTGTTaGCAATTAGCTGCCCACTTT +
Preference number: 5 (lower is better)
Translates to: VQKQVCVAVFQYHFIYRHNPKYC*QLAAHF
Trigger: AAAGTGGGCAGCTAATTGCAAACAGTATTTGGGATT...GTGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGGGACAAAGTATCACTACACCGTGTTAATGAAGTATTGAAATGGAAGGTCCTAGCAAGAGAGCTGATTTaGCCTGATTTAATGCAGATT +
Preference number: 5 (lower is better)
Translates to: RDKVSLHRVNEVLKWKVLARELI*PDLMQI
Trigger: AATCTGCATTAAATCAGGCAAAATCAGCTCTCTTGC...TAGGACCTTCCATTTCAATACTTCATTAACACGGTGTAGTGATACTTTGTCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAAGAATGTTCAGAATATTaGCCTGTTTCAGGACTGGAT +
Preference number: 5 (lower is better)
Translates to: WKKVTSALSLSGRYVSTEECSEY*PVSGLD
Trigger: ATCCAGTCCTGAAACAGGCAAATATTCTGAACATTC...TTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTTTGGGAACGAAGCTTaGGGAGATATTTGCCATGCA +
Preference number: 5 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLFGNEA*GDICHA
Trigger: TGCATGGCAAATATCTCCCAAAGCTTCGTTCCCAAA...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTAATTATCTTCGTTCTTaGGGAACGAAGCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLNYLRS*GTKLWE
Trigger: CTCCCAAAGCTTCGTTCCCAAAGAACGAAGATAATT...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCAAAGTGGAAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCATGTAAACCTGTACTGTaGTCACCGTTTATTTCAGAA +
Preference number: 5 (lower is better)
Translates to: AKWKKVTSALSLSGRYVSCKPVL*SPFISE
Trigger: TTCTGAAATAAACGGTGACAACAGTACAGGTTTACA...TGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTTCCACTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCACGTGTTAATGAAGTATaGAAATGGAAGGTCCTACTT +
Preference number: 5 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPARVNEV*KWKVLL
Trigger: AAGTAGGACCTTCCATTTCAATACTTCATTAACACG...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TCTGGTAAACAAGAACAAAACGGGCACTTAGCTGATGATGGTTTTACACCTTGTCGTGTTAATGAAGTATaGAAATGGAAGGTCCTACTT +
Preference number: 5 (lower is better)
Translates to: SGKQEQNGHLADDGFTPCRVNEV*KWKVLL
Trigger: AAGTAGGACCTTCCATTTCAATACTTCATTAACACG...ACAAGGTGTAAAACCATCATCAGCTAAGTGCCCGTTTTGTTCTTGTTTACCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCCAGCAAGTACAAAAACAAGTTaGTGTGGCTGTGTTTCAGTA +
Preference number: 5 (lower is better)
Translates to: VDMFQQNHEPEKHPLLPASTKTS*CGCVSV
Trigger: TACTGAAACACAGCCACACAAACTTGTTTTTGTACT...TGCTGGAAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp CCCTCAAACAAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTAGCTTCAAGTCAATATaGATGATGCTCTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: PSNKLSHSLTLSSVQISVSFKSI*MMLSGM
Trigger: CATTCCAGAGAGCATCATCAATATTGACTTGAAGCT...AACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTTGTTTGAGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATAAATAGATCCTTCACTTaGGTCCAGAGAAAGATTGAT +
Preference number: 5 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQINRSFT*VQRKID
Trigger: ATCAATCTTTCTCTGGACCAAAGTGAAGGATCTATT...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAAAGGTAACATCAGCCCTGTCTCTTTCAGGTAGATATGTTTCAACAGAACCATCAAGTTCATCCACATaGATGTCAATTTCATCTGGA +
Preference number: 5 (lower is better)
Translates to: KKVTSALSLSGRYVSTEPSSSST*MSISSG
Trigger: TCCAGATGAAATTGACATCAATGTGGATGAACTTGA...TGGTTCTGTTGAAACATATCTACCTGAAAGAGACAGGGCTGATGTTACCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGGTGCAAAAGTGTGAGTaGTCGGTTTGTTTCATTGTA +
Preference number: 5 (lower is better)
Translates to: RTYNSTRYSLERIKRRKEVQKCE*SVCFIV
Trigger: TACAATGAAACAAACCGACAACTCACACTTTTGCAC...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTGTGCAAAAGTGTGAGTaGTCGGTTTGTTTCATTGTA +
Preference number: 5 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLVQKCE*SVCFIV
Trigger: TACAATGAAACAAACCGACAACTCACACTTTTGCAC...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTAATTATCTTCGTTCTTaGGGAACGAAGCTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLNYLRS*GTKLWE
Trigger: CTCCCAAAGCTTCGTTCCCAAAGAACGAAGATAATT...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTGCCCAGCATTTCCAGTaGAGAATTATCTTCGTTCTT +
Preference number: 5 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLAQHFQ*RIIFVL
Trigger: AAGAACGAAGATAATTCTCAACTGGAAATGCTGGGC...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCATTTCTGTGGCAATGCTaGAATTTGTCATCTCACCTA +
Preference number: 5 (lower is better)
Translates to: STKTSLCGCVSVPLYLSAFLWQC*NLSSHL
Trigger: TAGGTGAGATGACAAATTCAAGCATTGCCACAGAAA...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAATCTCAGTCTCTTGCTTaGCTTCAGAATCGTGACATA +
Preference number: 5 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQSQSLA*LQNRDI
Trigger: TATGTCACGATTCTGAAGCAAAGCAAGAGACTGAGA...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAATTCTGGAGTTGGCTCTaGGTGAGTTACAAAAATGCT +
Preference number: 5 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQFWSWL*VSYKNA
Trigger: AGCATTTTTGTAACTCACCAAGAGCCAACTCCAGAA...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAAGATGTCGACTTTAAAGTAGTTACAAGCTCCTTCTACCCAGGACTCCAAATACGTGTTAATGAAGTATaGAAATGGAAGGTCCTACTT +
Preference number: 5 (lower is better)
Translates to: KDVDFKVVTSSFYPGLQIRVNEV*KWKVLL
Trigger: AAGTAGGACCTTCCATTTCAATACTTCATTAACACG...TATTTGGAGTCCTGGGTAGAAGGAGCTTGTAACTACTTTAAAGTCGACATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 90 bp AGTGCAACTGAAGAGTCATTTAACTCAGGACTTGATGCACTTGAATaGGTATACTCACTAGAAATAGTATCTCTGTCAAAATTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: SATEESFNSGLDALE*VYSLEIVSLSKFPD
Trigger: GTCTGGAAATTTTGACAGAGATACTATTTCTAGTGAGTATACTCATTCAAGTGCATCAAGTCCTGAGTTAAATGACTCTTCAGTTGCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 90 bp TTCTTTCAGCTTCAAGTCAATATCCTTCTCCATAGAAGACATTTCTaGATCATTGTAAAGGCAGCTAGTTCTCACACTTCTCTTATAAGA +
Preference number: 5 (lower is better)
Translates to: FFQLQVNILLHRRHF*IIVKAASSHTSLIR
Trigger: TCTTATAAGAGAAGTGTGAGAACTAGCTGCCTTTACAATGATCCAGAAATGTCTTCTATGGAGAAGGATATTGACTTGAAGCTGAAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424866.1
CDS-3UTR CAA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAAATAGATCCTTCACTTaGGTCCAGAGAAAGATTGAT +
Preference number: 5 (lower is better)
Translates to: STKTSLCGCVSVPLYLSANRSFT*VQRKID
Trigger: ATCAATCTTTCTCTGGACCAAAGTGAAGGATCTATT...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp TTTCAGGTAGATATGTTTCAACAGAACCATGAACCAGAAAAGCATCCTCTTCTTCGTGTTAATGAAGTATaGAAATGGAAGGTCCTACTT +
Preference number: 5 (lower is better)
Translates to: FQVDMFQQNHEPEKHPLLRVNEV*KWKVLL
Trigger: AAGTAGGACCTTCCATTTCAATACTTCATTAACACG...AAGAAGAGGATGCTTTTCTGGTTCATGGTTCTGTTGAAACATATCTACCTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGTACAAAAACAAGTTTGTGTGGCTGTGTTTCAGTACCACTTTATTTATCGGCAAGTACAAAAACAAGTTaGTGTGGCTGTGTTTCAGTA +
Preference number: 5 (lower is better)
Translates to: STKTSLCGCVSVPLYLSASTKTS*CGCVSV
Trigger: TACTGAAACACAGCCACACAAACTTGTTTTTGTACT...TGCCGATAAATAAAGTGGTACTGAAACACAGCCACACAAACTTGTTTTTGTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AGAACATACAATTCAACAAGATACTCGCTTGAAAGGATCAAGAGGAGAAAAGAGAGTACAAAAACAAGTTaGTGTGGCTGTGTTTCAGTA +
Preference number: 5 (lower is better)
Translates to: RTYNSTRYSLERIKRRKESTKTS*CGCVSV
Trigger: TACTGAAACACAGCCACACAAACTTGTTTTTGTACT...CTCTTTTCTCCTCTTGATCCTTTCAAGCGAGTATCTTGTTGAATTGTATGTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp GCTCAACTAAAATCTTTGAGGCACATAATTGGCAAAATAGGAAAGTACACACAAAATAGATCCTTCACTTaGGTCCAGAGAAAGATTGAT +
Preference number: 5 (lower is better)
Translates to: AQLKSLRHIIGKIGKYTQNRSFT*VQRKID
Trigger: ATCAATCTTTCTCTGGACCAAAGTGAAGGATCTATT...TTGTGTGTACTTTCCTATTTTGCCAATTATGTGCCTCAAAGATTTTAGTTGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS-3UTR CAA 90 bp AAACTTTCTCACTCCTTGACACTATCTTCTGTGCAAATTTCTGTTCTTTCTCTTTGTAAACCTGTACTGTaGTCACCGTTTATTTCAGAA +
Preference number: 5 (lower is better)
Translates to: KLSHSLTLSSVQISVLSLCKPVL*SPFISE
Trigger: TTCTGAAATAAACGGTGACAACAGTACAGGTTTACA...AAGAGAAAGAACAGAAATTTGCACAGAAGATAGTGTCAAGGAGTGAGAAAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp CTCGGCCCAAGGAAGACGAGCGGGGTCCCGGGAAAGTaGCCCGCCGGGGCGCAGCGACCGACTGCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: LGPRKTSGVPGK*PAGAQRPTAPS
Trigger: GGAGGGAGCAGTCGGTCGCTGCGCCCCGGCGGGCCACTTTCCCGGGACCCCGCTCGTCTTCCTTGGGCCGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376718.8
ENST00000492157.5
CDS CAA 90 bp TGGGGACCCTCACCCAAGCCGAGTTCAGAGAACGGCTCCACAGTCTaGCCAGACCACCCAGGCCCTGAGTCCCTGGCATCCAGTGATGGA +
Preference number: 6 (lower is better)
Translates to: WGPSPKPSSENGSTV*PDHPGPESLASSDG
Trigger: TCCATCACTGGATGCCAGGGACTCAGGGCCTGGGTGGTCTGGCAAGACTGTGGAGCCGTTCTCTGAACTCGGCTTGGGTGAGGGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp GAGGCCCAGCACCTTCTCCCACGGGGCTGTCGTCACTaGGGAAAACAGAGCTCTCCTTGGATGAGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: EAQHLLPRGCRH*GKQSSPWMSGC
Trigger: GCAGCCGCTCATCCAAGGAGAGCTCTGTTTTCCTCAGTGACGACAGCCCCGTGGGAGAAGGTGCTGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp CACCCAAGCCGAGTTCAGAGAACGGCTCCACAGTCTTaGCAGACCACCCAGGCCCTGAGTCCCTGGCATCCA +
Preference number: 6 (lower is better)
Translates to: HPSRVQRTAPQS*QTTQALSPWHP
Trigger: TGGATGCCAGGGACTCAGGGCCTGGGTGGTCTGGCAAGACTGTGGAGCCGTTCTCTGAACTCGGCTTGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp ACCATGCATGTTCCTCCGCCACCGCCCCTTCAGGGATaGGGCTGTAGGAGTCAAGCCCTGGGAGAAGGGTGT +
Preference number: 6 (lower is better)
Translates to: TMHVPPPPPLQG*GCRSQALGEGC
Trigger: ACACCCTTCTCCCAGGGCTTGACTCCTACAGCCCCATCCCTGAAGGGGCGGTGGCGGAGGAACATGCATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp GAAGAGGTCGAAGTGCTCACCGTGTTCTCCAGACCATaGATGTTCCTCCGCCACCGCCCCTTCAGGGATGGG +
Preference number: 6 (lower is better)
Translates to: EEVEVLTVFSRP*MFLRHRPFRDG
Trigger: CCCATCCCTGAAGGGGCGGTGGCGGAGGAACATGCATGGTCTGGAGAACACGGTGAGCACTTCGACCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp CCTTCTCCCACGGGGCTGTCGTCACTGAGGAAAACAGAGCTCTCCTaGGATGAGCGGCTGCTCCTAATGGTAGCCAGTCCGCTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: PSPTGLSSLRKTELS*DERLLLMVASPLSG
Trigger: CCCAGACAGCGGACTGGCTACCATTAGGAGCAGCCGCTCATCCAAGGAGAGCTCTGTTTTCCTCAGTGACGACAGCCCCGTGGGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp GCCCAGCGGGGAGCTGTCCTTCTGACAGGTCACTGTTaGGGAAGAAGTCATCTGCTGGGGAGTAGTCTGCAG +
Preference number: 6 (lower is better)
Translates to: AQRGAVLLTGHC*GRSHLLGSSLQ
Trigger: CTGCAGACTACTCCCCAGCAGATGACTTCTTCCCCAACAGTGACCTGTCAGAAGGACAGCTCCCCGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp TCCGGCTCGGAACCTTCAGCCATGTATCCTTCTGTTTaGCCATCACTGGGGATTGCCGCACCCCCACTGCAG +
Preference number: 6 (lower is better)
Translates to: SGSEPSAMYPSV*PSLGIAAPPLQ
Trigger: CTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAGAAGGATACATGGCTGAAGGTTCCGAGCCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp GCGTTTGCTTCGATTCGCGTCGCCCCTTCTGTAGCCTaGTGCTGTGCGGCACAGCTTGCCCCAGATACTTTA +
Preference number: 6 (lower is better)
Translates to: AFASIRVAPSVA*CCAAQLAPDTL
Trigger: TAAAGTATCTGGGGCAAGCTGTGCCGCACAGCAGCAGGCTACAGAAGGGGCGACGCGAATCGAAGCAAACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489555.1
CDS CCA 72 bp GGGCCAGCCCTGCCTCGGCTCTTACTCTTCTGTGATTaGCTGACTGGACCAGAGGCTTCCTCTAGTGCCAAA +
Preference number: 6 (lower is better)
Translates to: GPALPRLLLFCD*LTGPEASSSAK
Trigger: TTTGGCACTAGAGGAAGCCTCTGGTCCAGTCAGCCAATCACAGAAGAGTAAGAGCCGAGGCAGGGCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp ACGGGGCTGTCGTCACTGAGGAAAACAGAGCTCTCCTaGGATGAGCGGCTGCTCCTAATGGTAGCCAGTCCG +
Preference number: 6 (lower is better)
Translates to: TGLSSLRKTELS*DERLLLMVASP
Trigger: CGGACTGGCTACCATTAGGAGCAGCCGCTCATCCAAGGAGAGCTCTGTTTTCCTCAGTGACGACAGCCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp GCTGTCGTCACTGAGGAAAACAGAGCTCTCCTTGGATaGGCGGCTGCTCCTAATGGTAGCCAGTCCGCTGTC +
Preference number: 6 (lower is better)
Translates to: AVVTEENRALLG*AAAPNGSQSAV
Trigger: GACAGCGGACTGGCTACCATTAGGAGCAGCCGCTCATCCAAGGAGAGCTCTGTTTTCCTCAGTGACGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp GGGACTGCCCAGAAGCCATGGGTGCTGGGTCAAAATTaGAGAGGTCGAAGTGCTCACCGTGTTCTCCAGACC +
Preference number: 6 (lower is better)
Translates to: GTAQKPWVLGQN*RGRSAHRVLQT
Trigger: GGTCTGGAGAACACGGTGAGCACTTCGACCTCTTCAATTTTGACCCAGCACCCATGGCTTCTGGGCAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp ATCAAGTCCTTCAGGCCCAGCGGGGAGCTGTCCTTCTaGCAGGTCACTGTTGGGGAAGAAGTCATCTGCTGG +
Preference number: 6 (lower is better)
Translates to: IKSFRPSGELSF*QVTVGEEVICW
Trigger: CCAGCAGATGACTTCTTCCCCAACAGTGACCTGTCAGAAGGACAGCTCCCCGCTGGGCCTGAAGGACTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp ACCAAATGCACTCCAGGCTGGGAATGGCGCCACAGCTaGTGGTTCACCATCATCTGTAGGATTTCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: TKCTPGWEWRHS*WFTIICRISPG
Trigger: CCCTGGGGAAATCCTACAGATGATGGTGAACCAGCAGCTGTGGCGCCATTCCCAGCCTGGAGTGCATTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp ACTCTGTTCCACAAGTCGAGACTGTCAGGGGCCGTCTaGCGGGAGTTGGTGCTGCTGTGCAAAAGTGTGAGT +
Preference number: 6 (lower is better)
Translates to: TLFHKSRLSGAV*RELVLLCKSVS
Trigger: ACTCACACTTTTGCACAGCAGCACCAACTCCCGGCAGACGGCCCCTGACAGTCTCGACTTGTGGAACAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp GCGCGGCAGAGGCCAGCTGCCCACCCTCTTGAAAGTTaGCATGTAAAATATCTGGCACAAAGGTACCTCGGG +
Preference number: 6 (lower is better)
Translates to: ARQRPAAHPLES*HVKYLAQRYLG
Trigger: CCCGAGGTACCTTTGTGCCAGATATTTTACATGGCAACTTTCAAGAGGGTGGGCAGCTGGCCTCTGCCGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp GAAAGCATTTCCCATTCATTGTCATGGGTGACAGCCTaGAACGTAACTGCATCCGGGCCAGCCCTGCCTCGG +
Preference number: 6 (lower is better)
Translates to: ESISHSLSWVTA*NVTASGPALPR
Trigger: CCGAGGCAGGGCTGGCCCGGATGCAGTTACGTTGCAGGCTGTCACCCATGACAATGAATGGGAAATGCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp AAATGCACTCCAGGCTGGGAATGGCGCCACAGCTGCTaGTTCACCATCATCTGTAGGATTTCCCCAGGGCTC +
Preference number: 6 (lower is better)
Translates to: KCTPGWEWRHSC*FTIICRISPGL
Trigger: GAGCCCTGGGGAAATCCTACAGATGATGGTGAACCAGCAGCTGTGGCGCCATTCCCAGCCTGGAGTGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp TTCCGGCTCGGAACCTTCAGCCATGTATCCTTCTGTTaGACCATCACTGGGGATTGCCGCACCCCCACTGCA +
Preference number: 6 (lower is better)
Translates to: FRLGTFSHVSFC*TITGDCRTPTA
Trigger: TGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAGAAGGATACATGGCTGAAGGTTCCGAGCCGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp GACTCTCCTGTAGGGCTCGATGACCTTCATGTCAATGCGCTGCTCTaGTTCTCCAATGACCACTGTCCTCCAAAGCCGGTTGTCCTCCCG +
Preference number: 6 (lower is better)
Translates to: DSPVGLDDLHVNALL*FSNDHCPPKPVVLP
Trigger: CGGGAGGACAACCGGCTTTGGAGGACAGTGGTCATTGGAGAACAAGAGCAGCGCATTGACATGAAGGTCATCGAGCCCTACAGGAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
ENST00000466266.6
ENST00000488346.5
ENST00000494975.1
CDS CAA 90 bp AAATCGGGTTTCCGGCTCGGAACCTTCAGCCATGTATCCTTCTGTTaGACCATCACTGGGGATTGCCGCACCCCCACTGCAGTCATCCCA +
Preference number: 6 (lower is better)
Translates to: KSGFRLGTFSHVSFC*TITGDCRTPTAVIP
Trigger: TGGGATGACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAGAAGGATACATGGCTGAAGGTTCCGAGCCGGAAACCCGATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp GTCCGGATGATCACAGACTGGCAGCATGGTGTCCTGACACTGCTCTaGGGTAGGTGTTTCAGGAGTCAGCTCATCACCAGCAGCAGACAC +
Preference number: 6 (lower is better)
Translates to: VRMITDWQHGVLTLL*GRCFRSQLITSSRH
Trigger: GTGTCTGCTGCTGGTGATGAGCTGACTCCTGAAACACCTACCCAAGAGCAGTGTCAGGACACCATGCTGCCAGTCTGTGATCATCCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp CTCATCAGAGGCAGGGAGCTCCCAATCTACCTGATTTaGTTCCTGATACTCCAAGCCCCAGGGTTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: LIRGRELPIYLI*FLILQAPGFQL
Trigger: CAGCTGGAACCCTGGGGCTTGGAGTATCAGGAAGCAAATCAGGTAGATTGGGAGCTCCCTGCCTCTGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp CATTGTACAGTTGCATCATGCTGGGGTCGTCGTAACTaGACTGGCTGCTTTCCCCGACGTCATCCTCCATGG +
Preference number: 6 (lower is better)
Translates to: HCTVASCWGRRN*TGCFPRRHPPW
Trigger: CCATGGAGGATGACGTCGGGGAAAGCAGCCAGTCCAGTTACGACGACCCCAGCATGATGCAACTGTACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp GACTCAGGGTCTTCACGAATATGCAGCACAGCCAGCTaGGATCCAGGCAGTCTGTTTTTGGTCTCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: DSGSSRICSTAS*DPGSLFLVSAW
Trigger: CCAGGCTGAGACCAAAAACAGACTGCCTGGATCCCAGCTGGCTGTGCTGCATATTCGTGAAGACCCTGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp CTGCCTGCCACGGCTTCTGTTGAGGATGTCCGGCTATaGGAGACCATCTCTGGACACCTCCTGTTGATGACT +
Preference number: 6 (lower is better)
Translates to: LPATASVEDVRL*ETISGHLLLMT
Trigger: AGTCATCAACAGGAGGTGTCCAGAGATGGTCTCCAATAGCCGGACATCCTCAACAGAAGCCGTGGCAGGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp TGGGACTGCCCAGAAGCCATGGGTGCTGGGTCAAAATaGAAGAGGTCGAAGTGCTCACCGTGTTCTCCAGAC +
Preference number: 6 (lower is better)
Translates to: WDCPEAMGAGSK*KRSKCSPCSPD
Trigger: GTCTGGAGAACACGGTGAGCACTTCGACCTCTTCAATTTTGACCCAGCACCCATGGCTTCTGGGCAGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp CCTTGGTATGCTCATCAGAGGCAGGGAGCTCCCAATCTACCTGATTaGCTTCCTGATACTCCAAGCCCCAGGGTTCCAGCTGTCTCACTG +
Preference number: 6 (lower is better)
Translates to: PWYAHQRQGAPNLPD*LPDTPSPRVPAVSL
Trigger: CAGTGAGACAGCTGGAACCCTGGGGCTTGGAGTATCAGGAAGCAAATCAGGTAGATTGGGAGCTCCCTGCCTCTGATGAGCATACCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp CAGCCCTGCCTCGGCTCTTACTCTTCTGTGATTGGCTaGCTGGACCAGAGGCTTCCTCTAGTGCCAAAGATT +
Preference number: 6 (lower is better)
Translates to: QPCLGSYSSVIG*LDQRLPLVPKI
Trigger: AATCTTTGGCACTAGAGGAAGCCTCTGGTCCAGTCAGCCAATCACAGAAGAGTAAGAGCCGAGGCAGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp AAGATCCAGAGAATTAGGAGGTTCAGGCCTCATGTCTaGAGCACTGGGACTCAGCACGCCCTCTTCAAAGGG +
Preference number: 6 (lower is better)
Translates to: KIQRIRRFRPHV*STGTQHALFKG
Trigger: CCCTTTGAAGAGGGCGTGCTGAGTCCCAGTGCTGCAGACATGAGGCCTGAACCTCCTAATTCTCTGGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
ENST00000466266.6
ENST00000480674.1
ENST00000488346.5
CDS GCA 72 bp GCCATGGGTGCTGGGTCAAAATTGAAGAGGTCGAAGTaGTCACCGTGTTCTCCAGACCATGCATGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: AMGAGSKLKRSK*SPCSPDHACSS
Trigger: GGAGGAACATGCATGGTCTGGAGAACACGGTGAGCACTTCGACCTCTTCAATTTTGACCCAGCACCCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp GTTGCATCATGCTGGGGTCGTCGTAACTGGACTGGCTaGTTTCCCCGACGTCATCCTCCATGGAGATATTCT +
Preference number: 6 (lower is better)
Translates to: VASCWGRRNWTG*FPRRHPPWRYS
Trigger: AGAATATCTCCATGGAGGATGACGTCGGGGAAAGCAGCCAGTCCAGTTACGACGACCCCAGCATGATGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp CTGTCAGGGGCCGTCTGCCGGGAGTTGGTGCTGCTGTaGAAAAGTGTGAGTTGTCGGTTTGTTTCATTGTAC +
Preference number: 6 (lower is better)
Translates to: LSGAVCRELVLL*KSVSCRFVSLY
Trigger: GTACAATGAAACAAACCGACAACTCACACTTTTGCACAGCAGCACCAACTCCCGGCAGACGGCCCCTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp AGCCATGTATCCTTCTGTTTGACCATCACTGGGGATTaGCGCACCCCCACTGCAGTCATCCCAGTCCAAATC +
Preference number: 6 (lower is better)
Translates to: SHVSFCLTITGD*RTPTAVIPVQI
Trigger: GATTTGGACTGGGATGACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAGAAGGATACATGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp CGCCCCTTCTGTAGCCTGCTGCTGTGCGGCACAGCTTaGCCCAGATACTTTAATTATTTCTGCTCCTTCGGA +
Preference number: 6 (lower is better)
Translates to: RPFCSLLLCGTA*PRYFNYFCSFG
Trigger: TCCGAAGGAGCAGAAATAATTAAAGTATCTGGGGCAAGCTGTGCCGCACAGCAGCAGGCTACAGAAGGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489555.1
CDS GCA 72 bp TTTGCTTCGATTCGCGTCGCCCCTTCTGTAGCCTGCTaGTGTGCGGCACAGCTTGCCCCAGATACTTTAATT +
Preference number: 6 (lower is better)
Translates to: FASIRVAPSVAC*CAAQLAPDTLI
Trigger: AATTAAAGTATCTGGGGCAAGCTGTGCCGCACAGCAGCAGGCTACAGAAGGGGCGACGCGAATCGAAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489555.1
CDS CCA 72 bp AGAAGATTGCTGGGACTGCCCAGAAGCCATGGGTGCTaGGTCAAAATTGAAGAGGTCGAAGTGCTCACCGTG +
Preference number: 6 (lower is better)
Translates to: RRLLGLPRSHGC*VKIEEVEVLTV
Trigger: CACGGTGAGCACTTCGACCTCTTCAATTTTGACCCAGCACCCATGGCTTCTGGGCAGTCCCAGCAATCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp AACCTTCAGCCATGTATCCTTCTGTTTGACCATCACTaGGGATTGCCGCACCCCCACTGCAGTCATCCCAGT +
Preference number: 6 (lower is better)
Translates to: NLQPCILLFDHH*GLPHPHCSHPS
Trigger: ACTGGGATGACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAGAAGGATACATGGCTGAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp GTCCTCACTTGGGGTAGAGCCATCCCATTCAGAGCCTaGCTTCATTATCAGTTGGGTGGGAGAACTGACAGC +
Preference number: 6 (lower is better)
Translates to: VLTWGRAIPFRA*LHYQLGGRTDS
Trigger: GCTGTCAGTTCTCCCACCCAACTGATAATGAAGCCAGGCTCTGAATGGGATGGCTCTACCCCAAGTGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp TCCCTGGCATCCAGTGATGGATCACCAACCTCACTATaGCCCAAGAACATCCAACTCTGGTCTTGTGCAGGG +
Preference number: 6 (lower is better)
Translates to: SLASSDGSPTSL*PKNIQLWSCAG
Trigger: CCCTGCACAAGACCAGAGTTGGATGTTCTTGGGCCATAGTGAGGTTGGTGATCCATCACTGGATGCCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp ATCACAGACTGGCAGCATGGTGTCCTGACACTGCTCTaGGGTAGGTGTTTCAGGAGTCAGCTCATCACCAGC +
Preference number: 6 (lower is better)
Translates to: ITDWQHGVLTLL*GRCFRSQLITS
Trigger: GCTGGTGATGAGCTGACTCCTGAAACACCTACCCAAGAGCAGTGTCAGGACACCATGCTGCCAGTCTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp GGTCCCAGGCATGCATTTGGAGCCAGAGTTCCTGGATaGAAAGGCGTCTCTATTCACCAGCCATGTGCCCTT +
Preference number: 6 (lower is better)
Translates to: GPRHAFGARVPG*KGVSIHQPCAL
Trigger: AAGGGCACATGGCTGGTGAATAGAGACGCCTTTCAATCCAGGAACTCTGGCTCCAAATGCATGCCTGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376713.3
CDS CAA 90 bp CGGAACCTTCAGCCATGTATCCTTCTGTTTGACCATCACTGGGGATaGCCGCACCCCCACTGCAGTCATCCCAGTCCAAATCATTGTCCA +
Preference number: 6 (lower is better)
Translates to: RNLQPCILLFDHHWG*PHPHCSHPSPNHCP
Trigger: TGGACAATGATTTGGACTGGGATGACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAGAAGGATACATGGCTGAAGGTTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp ACTGTTGGGGAAGAAGTCATCTGCTGGGGAGTAGTCTaGAGAATGAGAAGATTGCTGGGACTGCCCAGAAGC +
Preference number: 6 (lower is better)
Translates to: TVGEEVICWGVV*RMRRLLGLPRS
Trigger: GCTTCTGGGCAGTCCCAGCAATCTTCTCATTCTGCAGACTACTCCCCAGCAGATGACTTCTTCCCCAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp CTGTTTGACCATCACTGGGGATTGCCGCACCCCCACTaGAGTCATCCCAGTCCAAATCATTGTCCATATCTG +
Preference number: 6 (lower is better)
Translates to: LFDHHWGLPHPH*SHPSPNHCPYL
Trigger: CAGATATGGACAATGATTTGGACTGGGATGACTGCAGTGGGGGTGCGGCAATCCCCAGTGATGGTCAAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp AAATCACCCCACGAGGCTTCAGATGAGCAGATATCTTaGTTCCCTAGGTCCCCATCAACTGGCGTTTCCGGA +
Preference number: 6 (lower is better)
Translates to: KSPHEASDEQIS*FPRSPSTGVSG
Trigger: TCCGGAAACGCCAGTTGATGGGGACCTAGGGAAGCAAGATATCTGCTCATCTGAAGCCTCGTGGGGTGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp GACAAATCAAAGGGAGGTGTGTACGGTGCCAGCGACTaGTTCAGAGAATCTTCCTCCAAAGGAGGGTCACCA +
Preference number: 6 (lower is better)
Translates to: DKSKGGVYGASD*FRESSSKGGSP
Trigger: TGGTGACCCTCCTTTGGAGGAAGATTCTCTGAAGCAGTCGCTGGCACCGTACACACCTCCCTTTGATTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp GCCAAAGATTCTAGAGGCTTCATTTCTTCCAGAATCTaGAGCTGGGGACCCTCACCCAAGCCGAGTTCAGAG +
Preference number: 6 (lower is better)
Translates to: AKDSRGFISSRI*SWGPSPKPSSE
Trigger: CTCTGAACTCGGCTTGGGTGAGGGTCCCCAGCTGCAGATTCTGGAAGAAATGAAGCCTCTAGAATCTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp TTCGATTCGCGTCGCCCCTTCTGTAGCCTGCTGCTGTaGGGCACAGCTTGCCCCAGATACTTTAATTATTTC +
Preference number: 6 (lower is better)
Translates to: FDSRRPFCSLLL*GTACPRYFNYF
Trigger: GAAATAATTAAAGTATCTGGGGCAAGCTGTGCCGCACAGCAGCAGGCTACAGAAGGGGCGACGCGAATCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489555.1
CDS CCA 72 bp TCCAGTTGCCTTGGTTTTCTTCTTGATACCCAGAACTaGGTTGCTGGCCCCAGGAGGACAGTGCAACTGAAG +
Preference number: 6 (lower is better)
Translates to: SSCLGFLLDTQN*VAGPRRTVQLK
Trigger: CTTCAGTTGCACTGTCCTCCTGGGGCCAGCAACCCAGTTCTGGGTATCAAGAAGAAAACCAAGGCAACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp CTGGATTCATCCTCAGCAACGTGGCAGTTGGCCACCTaGATCTCTTCCTCTATTGACTCTTCACCACCGACA +
Preference number: 6 (lower is better)
Translates to: LDSSSATWQLAT*ISSSIDSSPPT
Trigger: TGTCGGTGGTGAAGAGTCAATAGAGGAAGAGATCCAGGTGGCCAACTGCCACGTTGCTGAGGATGAATCCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp AATATCTGGCACAAAGGTACCTCGGGAGTCCTCACTTaGGGTAGAGCCATCCCATTCAGAGCCTGGCTTCAT +
Preference number: 6 (lower is better)
Translates to: NIWHKGTSGVLT*GRAIPFRAWLH
Trigger: ATGAAGCCAGGCTCTGAATGGGATGGCTCTACCCCAAGTGAGGACTCCCGAGGTACCTTTGTGCCAGATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp ACAGGCTGTGGTGAAAGCATTTCCCATTCATTGTCATaGGTGACAGCCTGCAACGTAACTGCATCCGGGCCA +
Preference number: 6 (lower is better)
Translates to: TGCGESISHSLS*VTACNVTASGP
Trigger: TGGCCCGGATGCAGTTACGTTGCAGGCTGTCACCCATGACAATGAATGGGAAATGCTTTCACCACAGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp GTAGGGCTCGATGACCTTCATGTCAATGCGCTGCTCTaGTTCTCCAATGACCACTGTCCTCCAAAGCCGGTT +
Preference number: 6 (lower is better)
Translates to: VGLDDLHVNALL*FSNDHCPPKPV
Trigger: AACCGGCTTTGGAGGACAGTGGTCATTGGAGAACAAGAGCAGCGCATTGACATGAAGGTCATCGAGCCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
ENST00000466266.6
ENST00000488346.5
ENST00000494975.1
CDS CAA 72 bp GCTGAACTTGTCAGCATCTGGGTCTGGCTGCCTTGGTaGAATGTTCCAGAGTTGCTCATGGGAGTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: AELVSIWVWLPW*NVPELLMGVLP
Trigger: GGGAAGAACTCCCATGAGCAACTCTGGAACATTCAACCAAGGCAGCCAGACCCAGATGCTGACAAGTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp ATGAGAGGCGGGCTGAGAGGAGCCCTTTATGTCTGCTaGATAGCCAATTGGAGGCAGCACAGTTGCGTTTTC +
Preference number: 6 (lower is better)
Translates to: MRGGLRGALYVC*IANWRQHSCVF
Trigger: GAAAACGCAACTGTGCTGCCTCCAATTGGCTATCAAGCAGACATAAAGGGCTCCTCTCAGCCCGCCTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp CATCCTCAGCAACGTGGCAGTTGGCCACCTGGATCTCTTCCTCTATaGACTCTTCACCACCGACACTGTCATCATCAGAACCTGAGCTTG +
Preference number: 6 (lower is better)
Translates to: HPQQRGSWPPGSLPL*TLHHRHCHHQNLSL
Trigger: CAAGCTCAGGTTCTGATGATGACAGTGTCGGTGGTGAAGAGTCAATAGAGGAAGAGATCCAGGTGGCCAACTGCCACGTTGCTGAGGATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp GAGAGGCGGGCTGAGAGGAGCCCTTTATGTCTGCTTGATAGCCAATaGGAGGCAGCACAGTTGCGTTTTCAGAATCGAGTTCTGCATTGG +
Preference number: 6 (lower is better)
Translates to: ERRAERSPLCLLDSQ*EAAQLRFQNRVLHW
Trigger: CCAATGCAGAACTCGATTCTGAAAACGCAACTGTGCTGCCTCCAATTGGCTATCAAGCAGACATAAAGGGCTCCTCTCAGCCCGCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp GCTGCTGTGCAAAAGTGTGAGTTGTCGGTTTGTTTCATTGTACAGTaGCATCATGCTGGGGTCGTCGTAACTGGACTGGCTGCTTTCCCC +
Preference number: 6 (lower is better)
Translates to: AAVQKCELSVCFIVQ*HHAGVVVTGLAAFP
Trigger: GGGGAAAGCAGCCAGTCCAGTTACGACGACCCCAGCATGATGCAACTGTACAATGAAACAAACCGACAACTCACACTTTTGCACAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp TCTTCTGAGGATGAGAGGAGGCTTTCTAACGGAGGGTaGGAAGGATGCACGACTACAGCTCTTCAGCATCTC +
Preference number: 6 (lower is better)
Translates to: SSEDERRLSNGG*EGCTTTALQHL
Trigger: GAGATGCTGAAGAGCTGTAGTCGTGCATCCTTCTCACCCTCCGTTAGAAAGCCTCCTCTCATCCTCAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000466266.6
ENST00000488346.5
CDS TCA 72 bp GTACACAGCAATCTGTCGTCTCGGCTGCTGCTCCTCTaGCAGATAGCTGGAGAACAGGATGAGGACATCAAA +
Preference number: 6 (lower is better)
Translates to: VHSNLSSRLLLL*QIAGEQDEDIK
Trigger: TTTGATGTCCTCATCCTGTTCTCCAGCTATCTGTCAGAGGAGCAGCAGCCGAGACGACAGATTGCTGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp TCACTGGTTCCAGAGGCTGCTGGCGCATCTGGGGAATaGGTGTCTTTAACATTTGCTGAATGGCTGGGGATT +
Preference number: 6 (lower is better)
Translates to: SLVPEAAGASGE*VSLTFAEWLGI
Trigger: AATCCCCAGCCATTCAGCAAATGTTAAAGACACTCATTCCCCAGATGCGCCAGCAGCCTCTGGAACCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp AACGTGGCAGTTGGCCACCTGGATCTCTTCCTCTATTaGCTCTTCACCACCGACACTGTCATCATCAGAACC +
Preference number: 6 (lower is better)
Translates to: NVAVGHLDLFLY*LFTTDTVIIRT
Trigger: GGTTCTGATGATGACAGTGTCGGTGGTGAAGAGTCAATAGAGGAAGAGATCCAGGTGGCCAACTGCCACGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp TGGAGGCAGCACAGTTGCGTTTTCAGAATCGAGTTCTaGATTGGATGGGACAAACTCCCGTCCAGGCTCATA +
Preference number: 6 (lower is better)
Translates to: WRQHSCVFRIEF*IGWDKLPSRLI
Trigger: TATGAGCCTGGACGGGAGTTTGTCCCATCCAATGCAGAACTCGATTCTGAAAACGCAACTGTGCTGCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp TTTATGAGAGGCGGGCTGAGAGGAGCCCTTTATGTCTaGTTGATAGCCAATTGGAGGCAGCACAGTTGCGTT +
Preference number: 6 (lower is better)
Translates to: FMRGGLRGALYV*LIANWRQHSCV
Trigger: AACGCAACTGTGCTGCCTCCAATTGGCTATCAAGCAGACATAAAGGGCTCCTCTCAGCCCGCCTCTCATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp GATCAGGAAGTGCAGAAAGCACTATCTCTGCTGCTCTaGATCCCAGAGATTCATCCTCTGGAGACCCAGCTT +
Preference number: 6 (lower is better)
Translates to: DQEVQKALSLLL*IPEIHPLETQL
Trigger: AAGCTGGGTCTCCAGAGGATGAATCTCTGGGATGCAGAGCAGCAGAGATAGTGCTTTCTGCACTTCCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp TCTTCGATCAGGAAGTGCAGAAAGCACTATCTCTGCTaGTCTGCATCCCAGAGATTCATCCTCTGGAGACCC +
Preference number: 6 (lower is better)
Translates to: SSIRKCRKHYLC*SASQRFILWRP
Trigger: GGGTCTCCAGAGGATGAATCTCTGGGATGCAGAGCAGCAGAGATAGTGCTTTCTGCACTTCCTGATCGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp ATGATCTTCTTTACCAAATGCACTCCAGGCTGGGAATaGCGCCACAGCTGCTGGTTCACCATCATCTGTAGG +
Preference number: 6 (lower is better)
Translates to: MIFFTKCTPGWE*RHSCWFTIICR
Trigger: CCTACAGATGATGGTGAACCAGCAGCTGTGGCGCCATTCCCAGCCTGGAGTGCATTTGGTAAAGAAGATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp GTTGTCGGTTTGTTTCATTGTACAGTTGCATCATGCTaGGGTCGTCGTAACTGGACTGGCTGCTTTCCCCGA +
Preference number: 6 (lower is better)
Translates to: VVGLFHCTVASC*GRRNWTGCFPR
Trigger: TCGGGGAAAGCAGCCAGTCCAGTTACGACGACCCCAGCATGATGCAACTGTACAATGAAACAAACCGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp AGCTGGGATCCAGGCAGTCTGTTTTTGGTCTCAGCCTaGTTTCCCTCACTTCTTCGATCAGGAAGTGCAGAA +
Preference number: 6 (lower is better)
Translates to: SWDPGSLFLVSA*FPSLLRSGSAE
Trigger: TTCTGCACTTCCTGATCGAAGAAGTGAGGGAAACCAGGCTGAGACCAAAAACAGACTGCCTGGATCCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp CTTGAAAAGAATGCTACCTCTGAGGCGATGAGCCAGTaGCTCGGTGATGAGCTCAGGAGCCTCTTGGAGAAT +
Preference number: 6 (lower is better)
Translates to: LEKNATSEAMSQ*LGDELRSLLEN
Trigger: ATTCTCCAAGAGGCTCCTGAGCTCATCACCGAGCAACTGGCTCATCGCCTCAGAGGTAGCATTCTTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000376713.3
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
ENST00000492157.5
CDS CAA 72 bp ATTCTCAAGCCTAGTCGCCAAGGATGCTGCATCACTTaGCAGGGTTTCCCTCTCTGTGTCCTGCTTGTCAAG +
Preference number: 6 (lower is better)
Translates to: ILKPSRQGCCIT*QGFPLCVLLVK
Trigger: CTTGACAAGCAGGACACAGAGAGGGAAACCCTGCAAAGTGATGCAGCATCCTTGGCGACTAGGCTTGAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp CAACGTGGCAGTTGGCCACCTGGATCTCTTCCTCTATaGACTCTTCACCACCGACACTGTCATCATCAGAAC +
Preference number: 6 (lower is better)
Translates to: QRGSWPPGSLPL*TLHHRHCHHQN
Trigger: GTTCTGATGATGACAGTGTCGGTGGTGAAGAGTCAATAGAGGAAGAGATCCAGGTGGCCAACTGCCACGTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp TTCAATGAATCCCAAGCTCTGGATTCATCCTCAGCAACGTGGCAGTaGGCCACCTGGATCTCTTCCTCTATTGACTCTTCACCACCGACA +
Preference number: 6 (lower is better)
Translates to: FNESQALDSSSATWQ*ATWISSSIDSSPPT
Trigger: TGTCGGTGGTGAAGAGTCAATAGAGGAAGAGATCCAGGTGGCCAACTGCCACGTTGCTGAGGATGAATCCAGAGCTTGGGATTCATTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp TACAAGCTGGCTGAACTTGTCAGCATCTGGGTCTGGCTGCCTTGGTaGAATGTTCCAGAGTTGCTCATGGGAGTTCTTCCCATTACCTTC +
Preference number: 6 (lower is better)
Translates to: YKLAELVSIWVWLPW*NVPELLMGVLPITF
Trigger: GAAGGTAATGGGAAGAACTCCCATGAGCAACTCTGGAACATTCAACCAAGGCAGCCAGACCCAGATGCTGACAAGTTCAGCCAGCTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp CCGTTCCTCTTCGGCCGTATATTCTGGAATAGACTCTaGCTCTTGGCCAGAATCTTTGTTGGCTGTGGGATC +
Preference number: 6 (lower is better)
Translates to: PFLFGRIFWNRL*LLARIFVGCGI
Trigger: GATCCCACAGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAATATACGGCCGAAGAGGAACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
ENST00000466266.6
ENST00000488346.5
ENST00000494975.1
CDS TCA 72 bp CTGTCTGGGCTAACAAGGTCTACATTGGCATCCACCTaGGCCTGGTTAGAATCATTGAGATCTGGAGGGTTC +
Preference number: 6 (lower is better)
Translates to: LSGLTRSTLAST*AWLESLRSGGF
Trigger: GAACCCTCCAGATCTCAATGATTCTAACCAGGCTCAGGTGGATGCCAATGTAGACCTTGTTAGCCCAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp GTGAAGCCCACATGTCTAGGTTCCCAGGACCTGAACTaGTTCGATTTCGAGATGACTGTTGCAGTGACTGAG +
Preference number: 6 (lower is better)
Translates to: VKPTCLGSQDLN*FDFEMTVAVTE
Trigger: CTCAGTCACTGCAACAGTCATCTCGAAATCGAATCAGTTCAGGTCCTGGGAACCTAGACATGTGGGCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp CCGTCTGCCGGGAGTTGGTGCTGCTGTGCAAAAGTGTaGGTTGTCGGTTTGTTTCATTGTACAGTTGCATCA +
Preference number: 6 (lower is better)
Translates to: PSAGSWCCCAKV*VVGLFHCTVAS
Trigger: TGATGCAACTGTACAATGAAACAAACCGACAACTCACACTTTTGCACAGCAGCACCAACTCCCGGCAGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp TCTTGCACCAGGCTGACTTTCAGGAGAAAAGCTGTCTaGTATCCAAGAACCGTCACCTTCTGGAGTTGGCTC +
Preference number: 6 (lower is better)
Translates to: SCTRLTFRRKAV*YPRTVTFWSWL
Trigger: GAGCCAACTCCAGAAGGTGACGGTTCTTGGATATCAGACAGCTTTTCTCCTGAAAGTCAGCCTGGTGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp CATGTCATCTATTGTTCCCGTGGATGTGTTGAGACCTaGGGCATCGCTGAAACTGTGGTCAAAGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: HVIYCSRGCVET*GIAETVVKGSF
Trigger: GAAGCTGCCTTTGACCACAGTTTCAGCGATGCCTCAGGTCTCAACACATCCACGGGAACAATAGATGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp GCTGAATGGCTGGGGATTTCAGGAGGCAATTCCCTTTaGTCTGAATCTGTGATATGTGAGGAGCCTGGTAAC +
Preference number: 6 (lower is better)
Translates to: AEWLGISGGNSL*SESVICEEPGN
Trigger: GTTACCAGGCTCCTCACATATCACAGATTCAGAGCAAAGGGAATTGCCTCCTGAAATCCCCAGCCATTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp AAAATACCCTGGATTCTCAAGCCTAGTCGCCAAGGATaGTGCATCACTTTGCAGGGTTTCCCTCTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: KIPWILKPSRQG*CITLQGFPLCV
Trigger: GACACAGAGAGGGAAACCCTGCAAAGTGATGCAGCATCCTTGGCGACTAGGCTTGAGAATCCAGGGTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp CGTGACATATATCAGGGCTGTCGGAAGCCTGAGAATTaGTGTCATGTTCGCAGTGCGTCAGGATATCAGGAT +
Preference number: 6 (lower is better)
Translates to: RDIYQGCRKPEN*CHVRSASGYQD
Trigger: ATCCTGATATCCTGACGCACTGCGAACATGACAGCAATTCTCAGGCTTCCGACAGCCCTGATATATGTCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp TCCTGGATTGAAAGGCGTCTCTATTCACCAGCCATGTaGCCTTGGGGAAAAGCTCAATCCTGCTCATCTCAA +
Preference number: 6 (lower is better)
Translates to: SWIERRLYSPAM*PWGKAQSCSSQ
Trigger: TTGAGATGAGCAGGATTGAGCTTTTCCCCAAGGGCACATGGCTGGTGAATAGAGACGCCTTTCAATCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376713.3
CDS CCA 72 bp TTCCATGACATAGTGGTAATCCGCCCGACTGCTGTCTaGCAGAAAACAGGCGGCAAACACAATGATGGCATT +
Preference number: 6 (lower is better)
Translates to: FHDIVVIRPTAV*QKTGGKHNDGI
Trigger: AATGCCATCATTGTGTTTGCCGCCTGTTTTCTGCCAGACAGCAGTCGGGCGGATTACCACTATGTCATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
ENST00000466266.6
CDS CCA 72 bp GCTGCCCACTTTTCTCATTCAATGTGTGATGTTCACTaGGAGCACTGTCCTTGGTATGCTCATCAGAGGCAG +
Preference number: 6 (lower is better)
Translates to: AAHFSHSMCDVH*EHCPWYAHQRQ
Trigger: CTGCCTCTGATGAGCATACCAAGGACAGTGCTCCCAGTGAACATCACACATTGAATGAGAAAAGTGGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp ATGACCTTTCCATGGATCTGGGTGTGGAAAATACCCTaGATTCTCAAGCCTAGTCGCCAAGGATGCTGCATC +
Preference number: 6 (lower is better)
Translates to: MTFPWIWVWKIP*ILKPSRQGCCI
Trigger: GATGCAGCATCCTTGGCGACTAGGCTTGAGAATCCAGGGTATTTTCCACACCCAGATCCATGGAAAGGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp TTGTCCATCGCCATGACCTTTCCATGGATCTGGGTGTaGAAAATACCCTGGATTCTCAAGCCTAGTCGCCAA +
Preference number: 6 (lower is better)
Translates to: LSIAMTFPWIWV*KIPWILKPSRQ
Trigger: TTGGCGACTAGGCTTGAGAATCCAGGGTATTTTCCACACCCAGATCCATGGAAAGGTCATGGCGATGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp TCCCTTTCAAATGGACTTTCAATTAGTCTCCCTTCCTaGGGTGAGGCCTTCCACCACTCAGTGCTATCAGCT +
Preference number: 6 (lower is better)
Translates to: SLSNGLSISLPS*GEAFHHSVLSA
Trigger: AGCTGATAGCACTGAGTGGTGGAAGGCCTCACCCCAGGAAGGGAGACTAATTGAAAGTCCATTTGAAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp GCAGCACAGTTGCGTTTTCAGAATCGAGTTCTGCATTaGATGGGACAAACTCCCGTCCAGGCTCATAAATGG +
Preference number: 6 (lower is better)
Translates to: AAQLRFQNRVLH*MGQTPVQAHKW
Trigger: CCATTTATGAGCCTGGACGGGAGTTTGTCCCATCCAATGCAGAACTCGATTCTGAAAACGCAACTGTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp GTGGATGTGTTGAGACCTGAGGCATCGCTGAAACTGTaGTCAAAGGCAGCTTCGCTTATATCCAGACAAGTG +
Preference number: 6 (lower is better)
Translates to: VDVLRPEASLKL*SKAASLISRQV
Trigger: CACTTGTCTGGATATAAGCGAAGCTGCCTTTGACCACAGTTTCAGCGATGCCTCAGGTCTCAACACATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp TGCTTCCCTAGGTCCCCATCAACTGGCGTTTCCGGATaGCCTTCGGATAATGTCAGTTTACTCATGTCATCT +
Preference number: 6 (lower is better)
Translates to: CFPRSPSTGVSG*PSDNVSLLMSS
Trigger: AGATGACATGAGTAAACTGACATTATCCGAAGGCCATCCGGAAACGCCAGTTGATGGGGACCTAGGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp CATCCTCTGACAGTAGTCCATTTGGTCTTGATATCCTaGTTCCGAGCTCAAGGAACTCTGTCTCCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: HPLTVVHLVLIS*FRAQGTLSPPP
Trigger: TGGAGGAGGAGACAGAGTTCCTTGAGCTCGGAACCAGGATATCAAGACCAAATGGACTACTGTCAGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
ENST00000480674.1
CDS CCA 72 bp CTCTTTGTAAACTTCTTAAGGTGCACTGTAGCACAGTaGTCCCAGGCATGCATTTGGAGCCAGAGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: LFVNFLRCTVAQ*SQACIWSQSSW
Trigger: CCAGGAACTCTGGCTCCAAATGCATGCCTGGGACCACTGTGCTACAGTGCACCTTAAGAAGTTTACAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376713.3
CDS CCA 72 bp GAATCCAAGTCACACGATTTAGGCCCAATAACCACATaGACCTTCTCCAAGCGTTTGCTTCGATTCGCGTCG +
Preference number: 6 (lower is better)
Translates to: ESKSHDLGPITT*TFSKRLLRFAS
Trigger: CGACGCGAATCGAAGCAAACGCTTGGAGAAGGTCCATGTGGTTATTGGGCCTAAATCGTGTGACTTGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489555.1
CDS CAA 72 bp AGCACGAGAGAAGAGGAAGACTCTCGGAACTCAACGTaGGCATCGCTCTGCTCAACCGGATTAATGACTTTG +
Preference number: 6 (lower is better)
Translates to: STREEEDSRNST*ASLCSTGLMTL
Trigger: CAAAGTCATTAATCCGGTTGAGCAGAGCGATGCCAACGTTGAGTTCCGAGAGTCTTCCTCTTCTCTCGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376713.3
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
ENST00000492157.5
CDS CAA 90 bp AAGCAAAGTCTTCTATCAGGTGGTTTGTTCCTTGGGGAGATGTATTaGGCAAAGGTGACTTCTCCATGGGCAGGTTCTGGAACGGCAAGC +
Preference number: 6 (lower is better)
Translates to: KQSLLSGGLFLGEMY*AKVTSPWAGSGTAS
Trigger: GCTTGCCGTTCCAGAACCTGCCCATGGAGAAGTCACCTTTGCCAAATACATCTCCCCAAGGAACAAACCACCTGATAGAAGACTTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp ATACCCTGGATTCTCAAGCCTAGTCGCCAAGGATGCTGCATCACTTaGCAGGGTTTCCCTCTCTGTGTCCTGCTTGTCAAGATGAGATAT +
Preference number: 6 (lower is better)
Translates to: IPWILKPSRQGCCIT*QGFPLCVLLVKMRY
Trigger: ATATCTCATCTTGACAAGCAGGACACAGAGAGGGAAACCCTGCAAAGTGATGCAGCATCCTTGGCGACTAGGCTTGAGAATCCAGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp CTCCTGTTGATGACTTCCTTGACAACGAGAACCACCTaGTCACAAGTCACTGAAGGGTCCTCTTGTTGGTAC +
Preference number: 6 (lower is better)
Translates to: LLLMTSLTTRTT*SQVTEGSSCWY
Trigger: GTACCAACAAGAGGACCCTTCAGTGACTTGTGATCAGGTGGTTCTCGTTGTCAAGGAAGTCATCAACAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp GAACTGATTCGATTTCGAGATGACTGTTGCAGTGACTaGGGAGGAATGTCAGTCTCCTCTGCCGTGGAGTTA +
Preference number: 6 (lower is better)
Translates to: ELIRFRDDCCSD*GGMSVSSAVEL
Trigger: TAACTCCACGGCAGAGGAGACTGACATTCCTCCTCAGTCACTGCAACAGTCATCTCGAAATCGAATCAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp TGCAGGGTTTCCCTCTCTGTGTCCTGCTTGTCAAGATaGGATATAAGTGCCTCTGATTCACTGGTTCCAGAG +
Preference number: 6 (lower is better)
Translates to: CRVSLSVSCLSR*DISASDSLVPE
Trigger: CTCTGGAACCAGTGAATCAGAGGCACTTATATCTCATCTTGACAAGCAGGACACAGAGAGGGAAACCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp GAGGAAGACTCTCGGAACTCAACGTTGGCATCGCTCTaGTCAACCGGATTAATGACTTTGACAACTGCTGAT +
Preference number: 6 (lower is better)
Translates to: EEDSRNSTLASL*STGLMTLTTAD
Trigger: ATCAGCAGTTGTCAAAGTCATTAATCCGGTTGAGCAGAGCGATGCCAACGTTGAGTTCCGAGAGTCTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376713.3
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
ENST00000492157.5
CDS GCA 72 bp TCAGATGCAACCAGAGAAGACAGTTCCTGGTCACTCTaGCCTTTTTCAGAAATCCCTGAGGCATTCTCCACA +
Preference number: 6 (lower is better)
Translates to: SDATREDSSWSL*PFSEIPEAFST
Trigger: TGTGGAGAATGCCTCAGGGATTTCTGAAAAAGGGCAGAGTGACCAGGAACTGTCTTCTCTGGTTGCATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp CATGCAAGCACTGAGGTGCTTCTCAGTCTCTTGCTTTaGTTCAGAATCGTGACATATATCAGGGCTGTCGGA +
Preference number: 6 (lower is better)
Translates to: HASTEVLLSLLL*FRIVTYIRAVG
Trigger: TCCGACAGCCCTGATATATGTCACGATTCTGAAGCAAAGCAAGAGACTGAGAAGCACCTCAGTGCTTGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp ACTTCTTCGATCAGGAAGTGCAGAAAGCACTATCTCTaGTGCTCTGCATCCCAGAGATTCATCCTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: TSSIRKCRKHYL*CSASQRFILWR
Trigger: TCTCCAGAGGATGAATCTCTGGGATGCAGAGCAGCAGAGATAGTGCTTTCTGCACTTCCTGATCGAAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp GGCATCCACCTGAGCCTGGTTAGAATCATTGAGATCTaGAGGGTTCTCTATGAAATTCACAGAGCTGGGTTG +
Preference number: 6 (lower is better)
Translates to: GIHLSLVRIIEI*RVLYEIHRAGL
Trigger: CAACCCAGCTCTGTGAATTTCATAGAGAACCCTCCAGATCTCAATGATTCTAACCAGGCTCAGGTGGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp TTTTACAAGCTGGCTGAACTTGTCAGCATCTGGGTCTaGCTGCCTTGGTTGAATGTTCCAGAGTTGCTCATG +
Preference number: 6 (lower is better)
Translates to: FYKLAELVSIWV*LPWLNVPELLM
Trigger: CATGAGCAACTCTGGAACATTCAACCAAGGCAGCCAGACCCAGATGCTGACAAGTTCAGCCAGCTTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp CCGTCCAGGCTCATAAATGGGTTCTTCATCTATCTCTaGCTCAGTGAGACAAAGCTCACTGGATTCCACTTC +
Preference number: 6 (lower is better)
Translates to: PSRLINGFFIYL*LSETKLTGFHF
Trigger: GAAGTGGAATCCAGTGAGCTTTGTCTCACTGAGCCAGAGATAGATGAAGAACCCATTTATGAGCCTGGACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp CACAGTTGCGTTTTCAGAATCGAGTTCTGCATTGGATaGGACAAACTCCCGTCCAGGCTCATAAATGGGTTC +
Preference number: 6 (lower is better)
Translates to: HSCVFRIEFCIG*DKLPSRLINGF
Trigger: GAACCCATTTATGAGCCTGGACGGGAGTTTGTCCCATCCAATGCAGAACTCGATTCTGAAAACGCAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp CTGAGAGGAGCCCTTTATGTCTGCTTGATAGCCAATTaGAGGCAGCACAGTTGCGTTTTCAGAATCGAGTTC +
Preference number: 6 (lower is better)
Translates to: LRGALYVCLIAN*RQHSCVFRIEF
Trigger: GAACTCGATTCTGAAAACGCAACTGTGCTGCCTCCAATTGGCTATCAAGCAGACATAAAGGGCTCCTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp CTACTTCCCAGTCAACGTTTGATGGAGACAAAATGTTaGAGCCTGCTCCTACCGGCAAATAAACGGACTCAG +
Preference number: 6 (lower is better)
Translates to: LLPSQRLMETKC*SLLLPANKRTQ
Trigger: CTGAGTCCGTTTATTTGCCGGTAGGAGCAGGCTCCAACATTTTGTCTCCATCAAACGTTGACTGGGAAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp TCTTCGGCCGTATATTCTGGAATAGACTCTGACTCTTaGCCAGAATCTTTGTTGGCTGTGGGATCATGGCCA +
Preference number: 6 (lower is better)
Translates to: SSAVYSGIDSDS*PESLLAVGSWP
Trigger: TGGCCATGATCCCACAGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAATATACGGCCGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS CAA 72 bp CTGCCGGGAGTTGGTGCTGCTGTGCAAAAGTGTGAGTaGTCGGTTTGTTTCATTGTACAGTTGCATCATGCT +
Preference number: 6 (lower is better)
Translates to: LPGVGAAVQKCE*SVCFIVQLHHA
Trigger: AGCATGATGCAACTGTACAATGAAACAAACCGACAACTCACACTTTTGCACAGCAGCACCAACTCCCGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp ATCTGGGTCTGGCTGCCTTGGTTGAATGTTCCAGAGTaGCTCATGGGAGTTCTTCCCATTACCTTCCAGAAA +
Preference number: 6 (lower is better)
Translates to: IWVWLPWLNVPE*LMGVLPITFQK
Trigger: TTTCTGGAAGGTAATGGGAAGAACTCCCATGAGCAACTCTGGAACATTCAACCAAGGCAGCCAGACCCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp GCTGAGAGGAGCCCTTTATGTCTGCTTGATAGCCAATaGGAGGCAGCACAGTTGCGTTTTCAGAATCGAGTT +
Preference number: 6 (lower is better)
Translates to: AERSPLCLLDSQ*EAAQLRFQNRV
Trigger: AACTCGATTCTGAAAACGCAACTGTGCTGCCTCCAATTGGCTATCAAGCAGACATAAAGGGCTCCTCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp ATCTCCTTTAGCACGAGAGAAGAGGAAGACTCTCGGAACTCAACGTaGGCATCGCTCTGCTCAACCGGATTAATGACTTTGACAACTGCT +
Preference number: 6 (lower is better)
Translates to: ISFSTREEEDSRNST*ASLCSTGLMTLTTA
Trigger: AGCAGTTGTCAAAGTCATTAATCCGGTTGAGCAGAGCGATGCCAACGTTGAGTTCCGAGAGTCTTCCTCTTCTCTCGTGCTAAAGGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376713.3
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
ENST00000492157.5
CDS CAA 90 bp CGGAACTCAACGTTGGCATCGCTCTGCTCAACCGGATTAATGACTTaGACAACTGCTGATTCTAAAGTTTTGTCTTCACTCGCCAGCACA +
Preference number: 6 (lower is better)
Translates to: RNSTLASLCSTGLMT*TTADSKVLSSLAST
Trigger: TGTGCTGGCGAGTGAAGACAAAACTTTAGAATCAGCAGTTGTCAAAGTCATTAATCCGGTTGAGCAGAGCGATGCCAACGTTGAGTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376713.3
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
ENST00000489555.1
ENST00000492157.5
CDS CAA 90 bp GATAATGTCAGTTTACTCATGTCATCTATTGTTCCCGTGGATGTGTaGAGACCTGAGGCATCGCTGAAACTGTGGTCAAAGGCAGCTTCG +
Preference number: 6 (lower is better)
Translates to: DNVSLLMSSIVPVDV*RPEASLKLWSKAAS
Trigger: CGAAGCTGCCTTTGACCACAGTTTCAGCGATGCCTCAGGTCTCAACACATCCACGGGAACAATAGATGACATGAGTAAACTGACATTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp CTAGTTTTAGCTGCCTCTGATGCTTCCCTCAGTTCTTCATCCAGTTaGATGATGCTCTCTGGAATGTGGATGCAATCCATTGGGATCAGC +
Preference number: 6 (lower is better)
Translates to: LVLAASDASLSSSSS*MMLSGMWMQSIGIS
Trigger: GCTGATCCCAATGGATTGCATCCACATTCCAGAGAGCATCATCAAACTGGATGAAGAACTGAGGGAAGCATCAGAGGCAGCTAAAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS TCA 72 bp AACTGGTACTCCCCAGGGACTGGCATTTTGGTGTACTaGAGAATTTATCTCCAACACACCACTGGAGTCAGA +
Preference number: 6 (lower is better)
Translates to: NWYSPGTGILVY*RIYLQHTTGVR
Trigger: TCTGACTCCAGTGGTGTGTTGGAGATAAATTCTTCAGTACACCAAAATGCCAGTCCCTGGGGAGTACCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp GGCTGTGGGATCATGGCCAGTGTACTCAAAAGAATCTaGTTCATCGGGGGTATCAAGTTCATCCACATTGAT +
Preference number: 6 (lower is better)
Translates to: GCGIMASVLKRI*FIGGIKFIHID
Trigger: ATCAATGTGGATGAACTTGATACCCCCGATGAAGCAGATTCTTTTGAGTACACTGGCCATGATCCCACAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000424866.1
ENST00000426088.5
ENST00000443509.6
CDS CCA 72 bp TCTTCGGCCGTATATTCTGGAATAGACTCTGACTCTTaGCCAGAATCTTTGTTGGCTGTGGGATCTTCATGG +
Preference number: 6 (lower is better)
Translates to: SSAVYSGIDSDS*PESLLAVGSSW
Trigger: CCATGAAGATCCCACAGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAATATACGGCCGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000428286.5
ENST00000466266.6
ENST00000488346.5
CDS CCA 72 bp CTCACTTTCACTTTGTCCATCGCCATGACCTTTCCATaGATCTGGGTGTGGAAAATACCCTGGATTCTCAAG +
Preference number: 6 (lower is better)
Translates to: LTFTLSIAMTFP*IWVWKIPWILK
Trigger: CTTGAGAATCCAGGGTATTTTCCACACCCAGATCCATGGAAAGGTCATGGCGATGGACAAAGTGAAAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp TCTTCGGCCGTATATTCTGGAATAGACTCTGACTCTTaGCCAGAATCTTTGTTGGCTGTGGGATCTTCTGGA +
Preference number: 6 (lower is better)
Translates to: SSAVYSGIDSDS*PESLLAVGSSG
Trigger: TCCAGAAGATCCCACAGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAATATACGGCCGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494975.1
CDS CAA 72 bp CAAAAGTGTGAGTTGTCGGTTTGTTTCATTGTACAGTaGCATCATGCTGGGGTCGTCGTAACTGGACTGGCT +
Preference number: 6 (lower is better)
Translates to: QKCELSVCFIVQ*HHAGVVVTGLA
Trigger: AGCCAGTCCAGTTACGACGACCCCAGCATGATGCAACTGTACAATGAAACAAACCGACAACTCACACTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp GCTGCCTCTGATGCTTCCCTCAGTTCTTCATCCAGTTaGATGATGCTCTCTGGAATGTGGATGCAATCCATT +
Preference number: 6 (lower is better)
Translates to: AASDASLSSSSS*MMLSGMWMQSI
Trigger: AATGGATTGCATCCACATTCCAGAGAGCATCATCAAACTGGATGAAGAACTGAGGGAAGCATCAGAGGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS CAA 90 bp CACTGCAGTCATCCCAGTCCAAATCATTGTCCATATCTGAGATCGTaGCAGTGGACTGAGTATCCTCCAAAATCACTCTGTTCCACAAGT +
Preference number: 6 (lower is better)
Translates to: HCSHPSPNHCPYLRS*QWTEYPPKSLCSTS
Trigger: ACTTGTGGAACAGAGTGATTTTGGAGGATACTCAGTCCACTGCAACGATCTCAGATATGGACAATGATTTGGACTGGGATGACTGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp CAGCTGAGAAGCCCAGCATTTCCAGTTGAGAATTATCTTCGTTCTTaGGGAACGAAGCTTTGGGAGATATTTGCCATGCAACATCTCCTG +
Preference number: 6 (lower is better)
Translates to: QLRSPAFPVENYLRS*GTKLWEIFAMQHLL
Trigger: CAGGAGATGTTGCATGGCAAATATCTCCCAAAGCTTCGTTCCCAAAGAACGAAGATAATTCTCAACTGGAAATGCTGGGCTTCTCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp CAGTTCAGGCTGACCAAATTCAGACTCCCAGGGACCTaGCTTTGTAAATTCGAGGCTCTTTGGTTGAAATAC +
Preference number: 6 (lower is better)
Translates to: QFRLTKFRLPGT*LCKFEALWLKY
Trigger: GTATTTCAACCAAAGAGCCTCGAATTTACAAAGTCAGGTCCCTGGGAGTCTGAATTTGGTCAGCCTGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp TCCAGATCAGAACTGGGATTTCCAGGTGCAAAGATGTaGTCCCTGGAGTCATTGTTTTTCTTGCCCCAGATT +
Preference number: 6 (lower is better)
Translates to: SRSELGFPGAKM*SLESLFFLPQI
Trigger: AATCTGGGGCAAGAAAAACAATGACTCCAGGGATCACATCTTTGCACCTGGAAATCCCAGTTCTGATCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp CAGAGCCTGGCTTCATTATCAGTTGGGTGGGAGAACTaGCAGCAGGAAAATTTTCTGTGGCAATGCTTGAAT +
Preference number: 6 (lower is better)
Translates to: QSLASLSVGWEN*QQENFLWQCLN
Trigger: ATTCAAGCATTGCCACAGAAAATTTTCCTGCTGTCAGTTCTCCCACCCAACTGATAATGAAGCCAGGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp TCCTCCTCCATTTCCGTGTCAGGGATCATGTTTTTCTaGACAGGCTGTGGTGAAAGCATTTCCCATTCATTG +
Preference number: 6 (lower is better)
Translates to: SSSISVSGIMFF*TGCGESISHSL
Trigger: CAATGAATGGGAAATGCTTTCACCACAGCCTGTTCAGAAAAACATGATCCCTGACACGGAAATGGAGGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp AAGCGTTTGCTTCGATTCAGTTTAGATTTGGCGCGTTaGAAAAATTCTTCCATGTCGTGGCTAGGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: KRLLRFSLDLAR*KNSSMSWLGVW
Trigger: CCAAACCCCTAGCCACGACATGGAAGAATTTTTGCAACGCGCCAAATCTAAACTGAATCGAAGCAAACGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376713.3
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
ENST00000492157.5
CDS GCA 72 bp GTTCTTTGGGAACGAAGCTTTGGGAGATATTTGCCATaGAACATCTCCTGTTGTCCCTGTTTCTGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: VLWERSFGRYLP*NISCCPCFWRR
Trigger: TCTTCTCCAGAAACAGGGACAACAGGAGATGTTGCATGGCAAATATCTCCCAAAGCTTCGTTCCCAAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp TTCGCAGTGCGTCAGGATATCAGGATTCTCACCATCTaGTTTCAAACTGAAGGGCTTCTTAGCATCTATCCA +
Preference number: 6 (lower is better)
Translates to: FAVRQDIRILTI*FQTEGLLSIYP
Trigger: TGGATAGATGCTAAGAAGCCCTTCAGTTTGAAAGCAGATGGTGAGAATCCTGATATCCTGACGCACTGCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp AGATCCTTCACTTTGGTCCAGAGAAAGATTGATATTTaGGGCTGTGAGCTTGATTCTCCGAGGATGAGTGTC +
Preference number: 6 (lower is better)
Translates to: RSFTLVQRKIDI*GCELDSPRMSV
Trigger: GACACTCATCCTCGGAGAATCAAGCTCACAGCCCCAAATATCAATCTTTCTCTGGACCAAAGTGAAGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
ENST00000466266.6
ENST00000480674.1
ENST00000488346.5
CDS CCA 72 bp CTCCAGCAAATGTTGGTGATGTGTAAGAGTCTGAGGTaGAATAATTGGTATCTAAGGGGGAAGGCACCGAAT +
Preference number: 6 (lower is better)
Translates to: LQQMLVMCKSLR*NNWYLRGKAPN
Trigger: ATTCGGTGCCTTCCCCCTTAGATACCAATTATTCCACCTCAGACTCTTACACATCACCAACATTTGCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp TCTTTGACTCATGAGGTGTTTTTCATGGGTATCTTTTaGCTGCAGGTTATCTGCGGACATCCCTGTTTGCAC +
Preference number: 6 (lower is better)
Translates to: SLTHEVFFMGIF*LQVICGHPCLH
Trigger: GTGCAAACAGGGATGTCCGCAGATAACCTGCAGCCAAAAGATACCCATGAAAAACACCTCATGAGTCAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp GCTCAATATCACCCTGAACTGGTACTCCCCAGGGACTaGCATTTTGGTGTACTGAAGAATTTATCTCCAACA +
Preference number: 6 (lower is better)
Translates to: AQYHPELVLPRD*HFGVLKNLSPT
Trigger: TGTTGGAGATAAATTCTTCAGTACACCAAAATGCCAGTCCCTGGGGAGTACCAGTTCAGGGTGATATTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp AGTTCTTCATCCAGTTTGATGATGCTCTCTGGAATGTaGATGCAATCCATTGGGATCAGCCCACTGAGTTCT +
Preference number: 6 (lower is better)
Translates to: SSSSSLMMLSGM*MQSIGISPLSS
Trigger: AGAACTCAGTGGGCTGATCCCAATGGATTGCATCCACATTCCAGAGAGCATCATCAAACTGGATGAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376717.6
ENST00000376718.8
ENST00000428286.5
CDS CAA 72 bp CAAGCGTTTGCTTCGATTCAGTTTAGATTTGGCGCGTaGCAAAAATTCTTCCATGTCGTGGCTAGGGGTTTG +
Preference number: 6 (lower is better)
Translates to: QAFASIQFRFGA*QKFFHVVARGL
Trigger: CAAACCCCTAGCCACGACATGGAAGAATTTTTGCAACGCGCCAAATCTAAACTGAATCGAAGCAAACGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000376713.3
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
ENST00000492157.5
CDS CAA 72 bp GAAATACAGAATCTGAGGCTCTCCTATCAATGGAGCTaGGCTTATGCTCTTTCCATGATTCAGGGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: EIQNLRLSYQWS*AYALSMIQGSG
Trigger: TCCAGAGCCCTGAATCATGGAAAGAGCATAAGCCAAGCTCCATTGATAGGAGAGCCTCAGATTCTGTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp CTGTGGATAAATGTGGATCACCATCAAACAAAGCTCTaGCACCAGGCTGACTTTCAGGAGAAAAGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: LWINVDHHQTKL*HQADFQEKSCL
Trigger: CAGACAGCTTTTCTCCTGAAAGTCAGCCTGGTGCAAGAGCTTTGTTTGATGGTGATCCACATTTATCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp AGTTTACTCATGTCATCTATTGTTCCCGTGGATGTGTaGAGACCTGAGGCATCGCTGAAACTGTGGTCAAAG +
Preference number: 6 (lower is better)
Translates to: SLLMSSIVPVDV*RPEASLKLWSK
Trigger: CTTTGACCACAGTTTCAGCGATGCCTCAGGTCTCAACACATCCACGGGAACAATAGATGACATGAGTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp CAGGATTCTCTGTGGATAAATGTGGATCACCATCAAACAAAGCTCTaGCACCAGGCTGACTTTCAGGAGAAAAGCTGTCTGATATCCAAG +
Preference number: 6 (lower is better)
Translates to: QDSLWINVDHHQTKL*HQADFQEKSCLISK
Trigger: CTTGGATATCAGACAGCTTTTCTCCTGAAAGTCAGCCTGGTGCAAGAGCTTTGTTTGATGGTGATCCACATTTATCCACAGAGAATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp TCTCCTATCAATGGAGCTTGGCTTATGCTCTTTCCATaGTTCAGGGCTCTGGAAAACAGATTCCTGTTCACT +
Preference number: 6 (lower is better)
Translates to: SPINGAWLMLFP*FRALENRFLFT
Trigger: AGTGAACAGGAATCTGTTTTCCAGAGCCCTGAATCATGGAAAGAGCATAAGCCAAGCTCCATTGATAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp ACTGCAGTCATCCCAGTCCAAATCATTGTCCATATCTaGGATCGTTGCAGTGGACTGAGTATCCTCCAAAAT +
Preference number: 6 (lower is better)
Translates to: TAVIPVQIIVHI*DRCSGLSILQN
Trigger: ATTTTGGAGGATACTCAGTCCACTGCAACGATCTCAGATATGGACAATGATTTGGACTGGGATGACTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp TTTGCAATTAGCTGCCCACTTTTCTCATTCAATGTGTaGTGTTCACTGGGAGCACTGTCCTTGGTATGCTCA +
Preference number: 6 (lower is better)
Translates to: FAISCPLFSFNV*CSLGALSLVCS
Trigger: TGAGCATACCAAGGACAGTGCTCCCAGTGAACATCACACATTGAATGAGAAAAGTGGGCAGCTAATTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp TCCTCATACTCTAAAACTTCCTCTGGTTCCTCGGTTTaGGGACTGAAAGTGACAGCAAGAGAGCTGATTTTG +
Preference number: 6 (lower is better)
Translates to: SSYSKTSSGSSV*GLKVTARELIL
Trigger: CAAAATCAGCTCTCTTGCTGTCACTTTCAGTCCTCAAACCGAGGAACCAGAGGAAGTTTTAGAGTATGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp TGTGGATCACCATCAAACAAAGCTCTTGCACCAGGCTaGCTTTCAGGAGAAAAGCTGTCTGATATCCAAGAA +
Preference number: 6 (lower is better)
Translates to: CGSPSNKALAPG*LSGEKLSDIQE
Trigger: TTCTTGGATATCAGACAGCTTTTCTCCTGAAAGTCAGCCTGGTGCAAGAGCTTTGTTTGATGGTGATCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp ATCAGAATTATCTGTTTCTACTTCCCAGTCAACGTTTaGTGGAGACAAAATGTTGGAGCCTGCTCCTACCGG +
Preference number: 6 (lower is better)
Translates to: IRIICFYFPVNV*WRQNVGACSYR
Trigger: CCGGTAGGAGCAGGCTCCAACATTTTGTCTCCATCAAACGTTGACTGGGAAGTAGAAACAGATAATTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp TGTGGGATCTTCATGGCCAGTGTACTCAAAAGAATCTaGTTCATCGGGGGTATCAAGTTCATCCACATTGAT +
Preference number: 6 (lower is better)
Translates to: CGIFMASVLKRI*FIGGIKFIHID
Trigger: ATCAATGTGGATGAACTTGATACCCCCGATGAAGCAGATTCTTTTGAGTACACTGGCCATGAAGATCCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000428286.5
ENST00000466266.6
ENST00000488346.5
CDS GCA 72 bp GGACAAACTCCTCATCATGTTCCACAAGGCTATCTTTaGCAGCCCCTGACAAAAGTGAACTGGATGAATAAT +
Preference number: 6 (lower is better)
Translates to: GQTPHHVPQGYL*QPLTKVNWMNN
Trigger: ATTATTCATCCAGTTCACTTTTGTCAGGGGCTGGCAAAGATAGCCTTGTGGAACATGATGAGGAGTTTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp CCATGTGTGATCCAGATCAGAACTGGGATTTCCAGGTaGAAAGATGTGATCCCTGGAGTCATTGTTTTTCTT +
Preference number: 6 (lower is better)
Translates to: PCVIQIRTGISR*KDVIPGVIVFL
Trigger: AAGAAAAACAATGACTCCAGGGATCACATCTTTGCACCTGGAAATCCCAGTTCTGATCTGGATCACACATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp GAATCCAAGTCACACGATTTAGGCCCAATAACCACATaGACCTTCTCCAAGCGTTTGCTTCGATTCAGTTTA +
Preference number: 6 (lower is better)
Translates to: ESKSHDLGPITT*TFSKRLLRFSL
Trigger: TAAACTGAATCGAAGCAAACGCTTGGAGAAGGTCCATGTGGTTATTGGGCCTAAATCGTGTGACTTGGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000376713.3
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
ENST00000492157.5
CDS CCA 72 bp TGGAGGGTTCTCTATGAAATTCACAGAGCTGGGTTGTaGCTCTATGTCAGAACCATACAATTCCATAATCCC +
Preference number: 6 (lower is better)
Translates to: WRVLYEIHRAGL*LYVRTIQFHNP
Trigger: GGGATTATGGAATTGTATGGTTCTGACATAGAGCCACAACCCAGCTCTGTGAATTTCATAGAGAACCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp TTGGTTGAAATACAGAATCTGAGGCTCTCCTATCAATaGAGCTTGGCTTATGCTCTTTCCATGATTCAGGGC +
Preference number: 6 (lower is better)
Translates to: LVEIQNLRLSYQ*SLAYALSMIQG
Trigger: GCCCTGAATCATGGAAAGAGCATAAGCCAAGCTCCATTGATAGGAGAGCCTCAGATTCTGTATTTCAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp ATGTTGGTGATGTGTAAGAGTCTGAGGTGGAATAATTaGTATCTAAGGGGGAAGGCACCGAATCTTCTCCTA +
Preference number: 6 (lower is better)
Translates to: MLVMCKSLRWNN*YLRGKAPNLLL
Trigger: TAGGAGAAGATTCGGTGCCTTCCCCCTTAGATACCAATTATTCCACCTCAGACTCTTACACATCACCAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp ATAAGATCTCTCTTCATCGTACTTGATGATGCTCTCTaGAATGTGGATGCAATCCATTGGGATCAGCCCACT +
Preference number: 6 (lower is better)
Translates to: IRSLFIVLDDAL*NVDAIHWDQPT
Trigger: AGTGGGCTGATCCCAATGGATTGCATCCACATTCCAGAGAGCATCATCAAGTACGATGAAGAGAGATCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424866.1
CDS CAA 72 bp GAGAGAATAGATCCTTCACTTTGGTCCAGAGAAAGATaGATATTTGGGGCTGTGAGCTTGATTCTCCGAGGA +
Preference number: 6 (lower is better)
Translates to: ERIDPSLWSRER*IFGAVSLILRG
Trigger: TCCTCGGAGAATCAAGCTCACAGCCCCAAATATCAATCTTTCTCTGGACCAAAGTGAAGGATCTATTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
ENST00000466266.6
ENST00000480674.1
ENST00000488346.5
CDS CAA 72 bp CAATCCTTGGGATTCTTCTGTCAACTGGTTCCAAAATaGGTGCCATATCTGGGCTGGCTCCTTTTTCTGATA +
Preference number: 6 (lower is better)
Translates to: QSLGFFCQLVPK*VPYLGWLLFLI
Trigger: TATCAGAAAAAGGAGCCAGCCCAGATATGGCACCAATTTTGGAACCAGTTGACAGAAGAATCCCAAGGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp TTGATATTTGGGGCTGTGAGCTTGATTCTCCGAGGATaGGTGTCATTAAGATCCAGAGAATTAGGAGGTTCA +
Preference number: 6 (lower is better)
Translates to: LIFGAVSLILRG*VSLRSRELGGS
Trigger: TGAACCTCCTAATTCTCTGGATCTTAATGACACTCATCCTCGGAGAATCAAGCTCACAGCCCCAAATATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223609.10
ENST00000376717.6
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
ENST00000466266.6
ENST00000480674.1
ENST00000488346.5
CDS TCA 72 bp CGGTCTGCTGAACTGCTCAGCTCTGCGGCTGTAGTGTaGAAGTACTTATTACATATAGGAAAAGATTTTCCA +
Preference number: 6 (lower is better)
Translates to: RSAELLSSAAVV*KYLLHIGKDFP
Trigger: TGGAAAATCTTTTCCTATATGTAATAAGTACTTTCACACTACAGCCGCAGAGCTGAGCAGTTCAGCAGACCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223609.10
CDS TCA 72 bp AAATCATTGTCCATATCTGAGATCGTTGCAGTGGACTaGGTATCCTCCAAAATCACTCTGTTCCACAAGTCG +
Preference number: 6 (lower is better)
Translates to: KSLSISEIVAVD*VSSKITLFHKS
Trigger: CGACTTGTGGAACAGAGTGATTTTGGAGGATACTCAGTCCACTGCAACGATCTCAGATATGGACAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS TCA 72 bp CTCATGGGAGTTCTTCCCATTACCTTCCAGAAAGGGTaGCTGATGGTTGTCACTAAAAGGATTAGTATAGTG +
Preference number: 6 (lower is better)
Translates to: LMGVLPITFQKG*LMVVTKRISIV
Trigger: CACTATACTAATCCTTTTAGTGACAACCATCAGTCACCCTTTCTGGAAGGTAATGGGAAGAACTCCCATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp TCATATCTTCTGTATAGAGTGAGGCTGGTTCTTCAGTaGATGGCGAGCTTTCTACTAAACTATTCATGGGTG +
Preference number: 6 (lower is better)
Translates to: SYLLYRVRLVLQ*MASFLLNYSWV
Trigger: CACCCATGAATAGTTTAGTAGAAAGCTCGCCATCCACTGAAGAACCAGCCTCACTCTATACAGAAGATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp ATGATTCAGGGCTCTGGAAAACAGATTCCTGTTCACTaGAACTCCACGCATCTGCAATATTTTTGGAGTCAA +
Preference number: 6 (lower is better)
Translates to: MIQGSGKQIPVH*NSTHLQYFWSQ
Trigger: TTGACTCCAAAAATATTGCAGATGCGTGGAGTTCCAGTGAACAGGAATCTGTTTTCCAGAGCCCTGAATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp CCCAGATTTCTGGAGCTGCTTCATTGTTTATCTCACTaGGTGAATTGTCCAGTAGTTCTGAAGAAGAAAAGG +
Preference number: 6 (lower is better)
Translates to: PRFLELLHCLSH*VNCPVVLKKKR
Trigger: CCTTTTCTTCTTCAGAACTACTGGACAATTCACCCAGTGAGATAAACAATGAAGCAGCTCCAGAAATCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp AGTCCAAATCATTGTCCATATCTGAGATCGTTGCAGTaGACTGAGTATCCTCCAAAATCACTCTGTTCCACA +
Preference number: 6 (lower is better)
Translates to: SPNHCPYLRSLQ*TEYPPKSLCST
Trigger: TGTGGAACAGAGTGATTTTGGAGGATACTCAGTCCACTGCAACGATCTCAGATATGGACAATGATTTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp GTTGAGAATTATCTTCGTTCTTTGGGAACGAAGCTTTaGGAGATATTTGCCATGCAACATCTCCTGTTGTCC +
Preference number: 6 (lower is better)
Translates to: VENYLRSLGTKL*EIFAMQHLLLS
Trigger: GGACAACAGGAGATGTTGCATGGCAAATATCTCCCAAAGCTTCGTTCCCAAAGAACGAAGATAATTCTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp GAGTCCTTTTCTTTAATTTGGTCTAATTTTACAAGCTaGCTGAACTTGTCAGCATCTGGGTCTGGCTGCCTT +
Preference number: 6 (lower is better)
Translates to: ESFSLIWSNFTS*LNLSASGSGCL
Trigger: AAGGCAGCCAGACCCAGATGCTGACAAGTTCAGCCAGCTTGTAAAATTAGACCAAATTAAAGAAAAGGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp TTCTTTCAGCTTCAAGTCAATATTGATGATGCTCTCTaGAATGTGGATGCAATCCATTGGGATCAGCCCACT +
Preference number: 6 (lower is better)
Translates to: FFQLQVNIDDAL*NVDAIHWDQPT
Trigger: AGTGGGCTGATCCCAATGGATTGCATCCACATTCCAGAGAGCATCATCAATATTGACTTGAAGCTGAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426088.5
ENST00000443509.6
CDS CAA 72 bp ACGTTGGCATCGCTCTGCTCAACCGGATTAATGACTTaGACAACTGCTGATTCTAAAGTTTTGTCTTCACTC +
Preference number: 6 (lower is better)
Translates to: TLASLCSTGLMT*TTADSKVLSSL
Trigger: GAGTGAAGACAAAACTTTAGAATCAGCAGTTGTCAAAGTCATTAATCCGGTTGAGCAGAGCGATGCCAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376713.3
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
ENST00000489555.1
ENST00000492157.5
CDS CAA 72 bp AATCAGAATTATCTGTTTCTACTTCCCAGTCAACGTTaGATGGAGACAAAATGTTGGAGCCTGCTCCTACCG +
Preference number: 6 (lower is better)
Translates to: NQNYLFLLPSQR*METKCWSLLLP
Trigger: CGGTAGGAGCAGGCTCCAACATTTTGTCTCCATCAAACGTTGACTGGGAAGTAGAAACAGATAATTCTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp ATCATTGAGATCTGGAGGGTTCTCTATGAAATTCACAGAGCTGGGTaGTGGCTCTATGTCAGAACCATACAATTCCATAATCCCAGAAGA +
Preference number: 6 (lower is better)
Translates to: IIEIWRVLYEIHRAG*WLYVRTIQFHNPRR
Trigger: TCTTCTGGGATTATGGAATTGTATGGTTCTGACATAGAGCCACAACCCAGCTCTGTGAATTTCATAGAGAACCCTCCAGATCTCAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp TCTTTGGTTGAAATACAGAATCTGAGGCTCTCCTATCAATGGAGCTaGGCTTATGCTCTTTCCATGATTCAGGGCTCTGGAAAACAGATT +
Preference number: 6 (lower is better)
Translates to: SLVEIQNLRLSYQWS*AYALSMIQGSGKQI
Trigger: AATCTGTTTTCCAGAGCCCTGAATCATGGAAAGAGCATAAGCCAAGCTCCATTGATAGGAGAGCCTCAGATTCTGTATTTCAACCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
CDS CAA 90 bp TTGAGAATTATCTTCGTTCTTTGGGAACGAAGCTTTGGGAGATATTaGCCATGCAACATCTCCTGTTGTCCCTGTTTCTGGAGAAGATCT +
Preference number: 6 (lower is better)
Translates to: LRIIFVLWERSFGRY*PCNISCCPCFWRRS
Trigger: AGATCTTCTCCAGAAACAGGGACAACAGGAGATGTTGCATGGCAAATATCTCCCAAAGCTTCGTTCCCAAAGAACGAAGATAATTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS GCA 72 bp ATTCTAAAGTTTTGTCTTCACTCGCCAGCACACTGCTaGCAACAAGTGTTATCGATAACTTCCCTTCATCAT +
Preference number: 6 (lower is better)
Translates to: ILKFCLHSPAHC*QQVLSITSLHH
Trigger: ATGATGAAGGGAAGTTATCGATAACACTTGTTGGCAGCAGTGTGCTGGCGAGTGAAGACAAAACTTTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376713.3
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
ENST00000489555.1
ENST00000492157.5
CDS GCA 72 bp TGGAGTTGGCTCTTGGTGAGTTACAAAAATGCTAGTTaGCACATTTTCAATCCTTGGGATTCTTCTGTCAAC +
Preference number: 6 (lower is better)
Translates to: WSWLLVSYKNAS*HIFNPWDSSVN
Trigger: GTTGACAGAAGAATCCCAAGGATTGAAAATGTGGCAACTAGCATTTTTGTAACTCACCAAGAGCCAACTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp TTTGGTGTACTGAAGAATTTATCTCCAACACACCACTaGAGTCAGACAGCTCCCTTTCAAATGGACTTTCAA +
Preference number: 6 (lower is better)
Translates to: FGVLKNLSPTHH*SQTAPFQMDFQ
Trigger: TTGAAAGTCCATTTGAAAGGGAGCTGTCTGACTCCAGTGGTGTGTTGGAGATAAATTCTTCAGTACACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp AGGAGTCAGTCACGTAAGGATCTGGGGAAAAGAACATaGCAGATAGTGGGAACTTATACAAGAAATTGGCAA +
Preference number: 6 (lower is better)
Translates to: RSQSRKDLGKRT*QIVGTYTRNWQ
Trigger: TTGCCAATTTCTTGTATAAGTTCCCACTATCTGCAATGTTCTTTTCCCCAGATCCTTACGTGACTGACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480674.1
CDS CAA 72 bp TATAGTTCCCTGAATATTGGCTCTAGAATAGGGTCTTaGAGATGTCATGTTCCGGAGAAGTCTAGACTCACT +
Preference number: 6 (lower is better)
Translates to: YSSLNIGSRIGS*RCHVPEKSRLT
Trigger: AGTGAGTCTAGACTTCTCCGGAACATGACATCTCAAAGACCCTATTCTAGAGCCAATATTCAGGGAACTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488346.5
CDS CAA 90 bp ATAAAGAGAAGGAGTCAGTCACGTAAGGATCTGGGGAAAAGAACATaGCAGATAGTGGGAACTTATACAAGAAATTGGCAAGCTCTGATT +
Preference number: 6 (lower is better)
Translates to: IKRRSQSRKDLGKRT*QIVGTYTRNWQALI
Trigger: AATCAGAGCTTGCCAATTTCTTGTATAAGTTCCCACTATCTGCAATGTTCTTTTCCCCAGATCCTTACGTGACTGACTCCTTCTCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480674.1
CDS CCA 72 bp TCCCTGAATGTTCAGAATATTTGCCTGTTTCAGGACTaGATAAAGAGGAAAAGGAATCACCATCAACTGAGT +
Preference number: 6 (lower is better)
Translates to: SLNVQNICLFQD*IKRKRNHHQLS
Trigger: ACTCAGTTGATGGTGATTCCTTTTCCTCTTTATCCAGTCCTGAAACAGGCAAATATTCTGAACATTCAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CCA 72 bp CTTCAAGTCAATATCCTTCTCCATAGAAGACATTTCTaGATCATTGTAAAGGCAGCTAGTTCTCACACTTCT +
Preference number: 6 (lower is better)
Translates to: LQVNILLHRRHF*IIVKAASSHTS
Trigger: AGAAGTGTGAGAACTAGCTGCCTTTACAATGATCCAGAAATGTCTTCTATGGAGAAGGATATTGACTTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424866.1
CDS TCA 72 bp ACAAGTGTTATCGATAACTTCCCTTCATCATTTAGCTaGTGCAGGTTAATTTCATCCCGGAATATGTGGAAT +
Preference number: 6 (lower is better)
Translates to: TSVIDNFPSSFS*CRLISSRNMWN
Trigger: ATTCCACATATTCCGGGATGAAATTAACCTGCATCAGCTAAATGATGAAGGGAAGTTATCGATAACACTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376713.3
ENST00000376718.8
ENST00000428286.5
ENST00000443509.6
ENST00000489555.1
ENST00000492157.5
CDS TCA 72 bp TGTTTTGTACAGCCTTTACAGAGCTTAGCACTATCCTaGCCATATAAAGTACACTCAATGAAGTCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: CFVQPLQSLALS*PYKVHSMKSSF
Trigger: AAAAGAAGACTTCATTGAGTGTACTTTATATGGTCAGGATAGTGCTAAGCTCTGTAAAGGCTGTACAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494975.1
CDS TCA 72 bp GAAGAGTCATTTAACTCAGGACTTGATGCACTTGAATaGGTATACTCACTAGAAATAGTATCTCTGTCAAAA +
Preference number: 6 (lower is better)
Translates to: EESFNSGLDALE*VYSLEIVSLSK
Trigger: TTTTGACAGAGATACTATTTCTAGTGAGTATACTCATTCAAGTGCATCAAGTCCTGAGTTAAATGACTCTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6
CDS CAA 72 bp ACTGAGTCATTCCAGATCTCTAAAAATGTAGGAGTTTaGCGATCAAAGCTCTTTTCAAACTCATTTATTCTG +
Preference number: 6 (lower is better)
Translates to: TESFQISKNVGV*RSKLFSNSFIL
Trigger: CAGAATAAATGAGTTTGAAAAGAGCTTTGATCGCAAAACTCCTACATTTTTAGAGATCTGGAATGACTCAGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376718.8
ENST00000426088.5
ENST00000428286.5
ENST00000443509.6