RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRTN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000196415, ENSG00000277804

Ensembl transcript IDs: ENST00000234347.10, ENST00000544537.2, ENST00000612112.4, ENST00000622152.2

Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGACGGGTGGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTaGTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCG +
Preference number: 1 (lower is better)
Translates to: GRVGPSRTPQCSGKS*FCPKIRLEGLEPGS
Trigger: CGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCCACCCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
3UTR GCA 72 bp GGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTaGTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAG +
Preference number: 3 (lower is better)
Translates to: GPSRTPQCSGKS*FCPKIRLEGLE
Trigger: CTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCGTAGGGCCGGGAGTGTaGCTGCGCCTCGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LLSKDPPRGFGARLGVPAVGPGV*LRLVPA
Trigger: GGCGGGCACGAGGCGCAGCCACACTCCCGGCCCTAC...GGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GCTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCGTAGGGCCGGGAGTGTaGCTGCGCCTCGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: ASVQRSASRVWSQARGPGVGPGV*LRLVPA
Trigger: GGCGGGCACGAGGCGCAGCCACACTCCCGGCCCTAC...GCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGTGCCTCCGCAGAAGTaGCTGCCCGGGTTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: LSKDPPRGFGARLGVPASVPPQK*LPGFPR
Trigger: GCGGGGGAACCCGGGCAGCCACTTCTGCGGAGGCAC...GCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTGGGTGCCGTGGGGCACTaGCTGGTCCTGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PKIRLEGLEPGSGSRPALGAVGH*LVLLWQ
Trigger: CTGCCACAGCAGGACCAGCCAGTGCCCCACGGCACC...CAGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTGAGGCACTGGGTGCCGTaGGGCACTGGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PKIRLEGLEPGSGSRPALRHWVP*GTGWSC
Trigger: GCAGGACCAGCCAGTGCCCCACGGCACCCAGTGCCT...CAGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCCCCATGGCCAGGCACTaGGTGCCGTGGGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: LSKDPPRGFGARLGVPASPMARH*VPWGTG
Trigger: GCCAGTGCCCCACGGCACCCAGTGCCTGGCCATGGG...GCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp TCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTCTGCAGGACCTGGGCTaGGGGGTCGTGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: SKDPPRGFGARLGVPASALQDLG*GVVGTH
Trigger: GTGGGTGCCCACGACCCCCCAGCCCAGGTCCTGCAG...AGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp GCTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCGAGGTCACGGTGGGGTaGGGTGCAGGGCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: ASVQRSASRVWSQARGPGEVTVG*GAGPAC
Trigger: ACAGGCCGGCCCTGCACCTCACCCCACCGTGACCTC...GCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCCCGTGGGGCACTGGCTaGTCCTGCTGTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSKDPPRGFGARLGVPASPWGTG*SCCGSW
Trigger: CCAGCTGCCACAGCAGGACCAGCCAGTGCCCCACGG...GCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp TCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTAGGCACTGGGTGCCGTaGGGCACTGGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SKDPPRGFGARLGVPASARHWVP*GTGWSC
Trigger: GCAGGACCAGCCAGTGCCCCACGGCACCCAGTGCCT...AGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GCTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCCCATGGCCAGGCACTaGGTGCCGTGGGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: ASVQRSASRVWSQARGPGPMARH*VPWGTG
Trigger: GCCAGTGCCCCACGGCACCCAGTGCCTGGCCATGGG...GCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCCCCATGGCCAGGCACTaGGTGCCGTGGGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: LLSKDPPRGFGARLGVPAPMARH*VPWGTG
Trigger: GCCAGTGCCCCACGGCACCCAGTGCCTGGCCATGGG...GGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCTTCAGGGGCGGCCCTTaGCCTCCACACGGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: LLSKDPPRGFGARLGVPAFRGGP*PPHGAA
Trigger: CGCTGCGCCGTGTGGAGGCCAAGGGCCGCCCCTGAA...GGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp CCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTGGATCAGGGGGCCACCTaGGTCTCCGAAGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: PKIRLEGLEPGSGSRPALDQGAT*VSEADA
Trigger: GGCATCTGCTTCGGAGACTCAGGTGGCCCCCTGATC...CAGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCTGTGGCTGCGCCTCGTaGCCGCCCACGATCTCCGCA +
Preference number: 4 (lower is better)
Translates to: LLSKDPPRGFGARLGVPACGCAS*PPTISA
Trigger: TGCGGAGATCGTGGGCGGGCACGAGGCGCAGCCACA...GGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp TCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTCTCCGCAGAAGTGGCTaGCCGGGTTCCCCCGCATCT +
Preference number: 4 (lower is better)
Translates to: SKDPPRGFGARLGVPASALRRSG*PGSPAS
Trigger: AGATGCGGGGGAACCCGGGCAGCCACTTCTGCGGAG...AGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTGAGTCTCCGAAGCAGATaGCGGCCTTGCGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: PKIRLEGLEPGSGSRPALSLRSR*RPCGEG
Trigger: TCCCTCGCCGCAAGGCCGGCATCTGCTTCGGAGACT...CAGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTGTCCTGCTGTGGCAGCTaGACTGTGGCGACGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PKIRLEGLEPGSGSRPALSCCGS*TVATEA
Trigger: TGCCTCCGTCGCCACAGTCCAGCTGCCACAGCAGGA...CAGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCCCGGCCAGCGCTGTaGGAGGGGCGGTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RPGRHSVRGRAASVQRSASRPAL*EGRFRG
Trigger: GCCCCTGAACCGCCCCTCCCACAGCGCTGGCCGGGA...GGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCTCCCGGCCAGCGCTGTaGGAGGGGCGGTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GPSRTPQCSGKSCFCPKISRPAL*EGRFRG
Trigger: GCCCCTGAACCGCCCCTCCCACAGCGCTGGCCGGGA...GATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GCTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCTCCGCCTCGAGGGTTTaGAGCCAGGCTCGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: ASVQRSASRVWSQARGPGSASRV*SQARGP
Trigger: GGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGA...GCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCTGGCAGAGCAGCCCCTaGGCCTCTCCGAGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: LLSKDPPRGFGARLGVPAWQSSP*ASPSLR
Trigger: ACGGAGGCTCGGAGAGGCCCAGGGGCTGCTCTGCCA...GGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544537.2
ENST00000622152.2
CDS-3UTR TCA 90 bp TCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTGATCAGGGGGCCACCTaGGTCTCCGAAGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: SKDPPRGFGARLGVPASADQGAT*VSEADA
Trigger: GGCATCTGCTTCGGAGACTCAGGTGGCCCCCTGATC...AGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp GGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATGAGGTCACGGTGGGGTaGGGTGCAGGGCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GAVPDATVFGEELLLSKDEVTVG*GAGPAC
Trigger: ACAGGCCGGCCCTGCACCTCACCCCACCGTGACCTC...ATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp GGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGAGGTCACGGTGGGGTaGGGTGCAGGGCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GRPGRHSVRGRAASVQRSEVTVG*GAGPAC
Trigger: ACAGGCCGGCCCTGCACCTCACCCCACCGTGACCTC...GGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp CGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCGAGGTCACGGTGGGGTaGGGTGCAGGGCCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: RPGRHSVRGRAASVQRSAEVTVG*GAGPAC
Trigger: ACAGGCCGGCCCTGCACCTCACCCCACCGTGACCTC...GGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCTGCTGGGTGGGCTCCTaGGTCCGCACGTTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLSKDPPRGFGARLGVPACWVGS*VRTLWA
Trigger: AGCCCACAACGTGCGGACGCAGGAGCCCACCCAGCA...GGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GCTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCGCCACCGAGAAGTGCTaGTGGGTGGGCTCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: ASVQRSASRVWSQARGPGATEKC*WVGSCV
Trigger: GACGCAGGAGCCCACCCAGCAGCACTTCTCGGTGGC...GCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGGCACTGGCTGGTCCTaGTGTGGCAGCTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: LSKDPPRGFGARLGVPASGTGWS*CGSWTV
Trigger: CACAGTCCAGCTGCCACAGCAGGACCAGCCAGTGCC...GCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCACGGTGGGGTGAGGTaGAGGGCCGGCCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GAVPDATVFGEELLLSKDHGGVR*RAGLSP
Trigger: GGGAGACAGGCCGGCCCTGCACCTCACCCCACCGTG...ATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGTAGGGCCGGGAGTGTaGCTGCGCCTCGTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GRHSVRGRAASVQRSASRVGPGV*LRLVPA
Trigger: GGCGGGCACGAGGCGCAGCCACACTCCCGGCCCTAC...CCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTGCCGTCAGCACGAAGCTaGGGTGGATCAAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: PKIRLEGLEPGSGSRPALPSARS*GGSRCL
Trigger: GAGGCACCTTGATCCACCCCAGCTTCGTGCTGACGG...CAGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCACGTTCACCAGGCGCTaGGGTATGTCCCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LSKDPPRGFGARLGVPASTFTRR*GMSRRQ
Trigger: CTGCCTGCGGGACATACCCCAGCGCCTGGTGAACGT...GCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp TCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTTGCGTCCGCACGTTGTaGGCTCCGAGCACCACGTTC +
Preference number: 4 (lower is better)
Translates to: SKDPPRGFGARLGVPASACVRTL*APSTTF
Trigger: GAACGTGGTGCTCGGAGCCCACAACGTGCGGACGCA...AGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCAGAAGTGCTGCTGGGTaGGCTCCTGCGTCCGCACGT +
Preference number: 4 (lower is better)
Translates to: LSKDPPRGFGARLGVPASRSAAG*APASAR
Trigger: ACGTGCGGACGCAGGAGCCCACCCAGCAGCACTTCT...GCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCACCGAGAAGTGCTGCTaGGTGGGCTCCTGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: LLSKDPPRGFGARLGVPATEKCC*VGSCVR
Trigger: GCGGACGCAGGAGCCCACCCAGCAGCACTTCTCGGT...GGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GCTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCACCGAGAAGTGCTGCTaGGTGGGCTCCTGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: ASVQRSASRVWSQARGPGTEKCC*VGSCVR
Trigger: GCGGACGCAGGAGCCCACCCAGCAGCACTTCTCGGT...GCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCTGCAGGACCTGGGCTaGGGGGTCGTGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: GAVPDATVFGEELLLSKDLQDLG*GVVGTH
Trigger: GTGGGTGCCCACGACCCCCCAGCCCAGGTCCTGCAG...ATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCCTGCAGGACCTGGGCTaGGGGGTCGTGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: RPGRHSVRGRAASVQRSALQDLG*GVVGTH
Trigger: GTGGGTGCCCACGACCCCCCAGCCCAGGTCCTGCAG...GGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCTTCAGGGGCGGCCCTTaGCCTCCACACGGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: GPSRTPQCSGKSCFCPKIFRGGP*PPHGAA
Trigger: CGCTGCGCCGTGTGGAGGCCAAGGGCCGCCCCTGAA...GATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGTCCCGGCCAGCGCTGTaGGAGGGGCGGTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RTPQCSGKSCFCPKIRLESRPAL*EGRFRG
Trigger: GCCCCTGAACCGCCCCTCCCACAGCGCTGGCCGGGA...CTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGTCCCGGCCAGCGCTGTaGGAGGGGCGGTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: DATVFGEELLLSKDPPRGSRPAL*EGRFRG
Trigger: GCCCCTGAACCGCCCCTCCCACAGCGCTGGCCGGGA...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTGTTATTGAGGTCACGGTaGGGTGAGGTGCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: PKIRLEGLEPGSGSRPALLLRSR*GEVQGR
Trigger: CCGGCCCTGCACCTCACCCCACCGTGACCTCAATAA...CAGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTGTGGCTGCGCCTCGTaGCCGCCCACGATCTCCGCA +
Preference number: 4 (lower is better)
Translates to: RPGRHSVRGRAASVQRSACGCAS*PPTISA
Trigger: TGCGGAGATCGTGGGCGGGCACGAGGCGCAGCCACA...GGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCGGCACTGGCTGGTCCTaGTGTGGCAGCTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: LLSKDPPRGFGARLGVPAGTGWS*CGSWTV
Trigger: CACAGTCCAGCTGCCACAGCAGGACCAGCCAGTGCC...GGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GCTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCAGCAGATGCCGGCCTTaGGGCGAGGGACGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: ASVQRSASRVWSQARGPGSRCRP*GEGRKC
Trigger: GCACTTTCGTCCCTCGCCGCAAGGCCGGCATCTGCT...GCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GCTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCAGTCTCCGAAGCAGATaGCGGCCTTGCGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: ASVQRSASRVWSQARGPGSLRSR*RPCGEG
Trigger: TCCCTCGCCGCAAGGCCGGCATCTGCTTCGGAGACT...GCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGCACGGTGGGGTGAGGTaGAGGGCCGGCCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: RTPQCSGKSCFCPKIRLEHGGVR*RAGLSP
Trigger: GGGAGACAGGCCGGCCCTGCACCTCACCCCACCGTG...CTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTGTGCCTCCGCAGAAGTaGCTGCCCGGGTTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: VPDATVFGEELLLSKDPPVPPQK*LPGFPR
Trigger: GCGGGGGAACCCGGGCAGCCACTTCTGCGGAGGCAC...AGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp TCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTAGCACGAAGCTGGGGTaGATCAAGGTGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: SKDPPRGFGARLGVPASASTKLG*IKVPPQ
Trigger: CTGCGGAGGCACCTTGATCCACCCCAGCTTCGTGCT...AGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCAGCACGAAGCTGGGGTaGATCAAGGTGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: LSKDPPRGFGARLGVPASSTKLG*IKVPPQ
Trigger: CTGCGGAGGCACCTTGATCCACCCCAGCTTCGTGCT...GCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GCTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCTGCGTCCGCACGTTGTaGGCTCCGAGCACCACGTTC +
Preference number: 4 (lower is better)
Translates to: ASVQRSASRVWSQARGPGCVRTL*APSTTF
Trigger: GAACGTGGTGCTCGGAGCCCACAACGTGCGGACGCA...GCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGAAGTGCTGCTGGGTaGGCTCCTGCGTCCGCACGT +
Preference number: 4 (lower is better)
Translates to: LLSKDPPRGFGARLGVPARSAAG*APASAR
Trigger: ACGTGCGGACGCAGGAGCCCACCCAGCAGCACTTCT...GGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp TCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTGGCACTGAGGTTGGCTaGGCTGCTCAGCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: SKDPPRGFGARLGVPASAGTEVG*AAQLDE
Trigger: CTCATCCAGCTGAGCAGCCCAGCCAACCTCAGTGCC...AGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCTCCTGCTGTGGCAGCTaGACTGTGGCGACGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLSKDPPRGFGARLGVPASCCGS*TVATEA
Trigger: TGCCTCCGTCGCCACAGTCCAGCTGCCACAGCAGGA...GGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCCGTGGGGCACTGGCTaGTCCTGCTGTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPSRTPQCSGKSCFCPKIPWGTG*SCCGSW
Trigger: CCAGCTGCCACAGCAGGACCAGCCAGTGCCCCACGG...GATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCCCGTGGGGCACTGGCTaGTCCTGCTGTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GRPGRHSVRGRAASVQRSPWGTG*SCCGSW
Trigger: CCAGCTGCCACAGCAGGACCAGCCAGTGCCCCACGG...GGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCGGTGCCGTGGGGCACTaGCTGGTCCTGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RPGRHSVRGRAASVQRSAGAVGH*LVLLWQ
Trigger: CTGCCACAGCAGGACCAGCCAGTGCCCCACGGCACC...GGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATGGTGCCGTGGGGCACTaGCTGGTCCTGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GAVPDATVFGEELLLSKDGAVGH*LVLLWQ
Trigger: CTGCCACAGCAGGACCAGCCAGTGCCCCACGGCACC...ATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCGGTGCCGTGGGGCACTaGCTGGTCCTGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GPSRTPQCSGKSCFCPKIGAVGH*LVLLWQ
Trigger: CTGCCACAGCAGGACCAGCCAGTGCCCCACGGCACC...GATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGCCCATGGCCAGGCACTaGGTGCCGTGGGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: DATVFGEELLLSKDPPRGPMARH*VPWGTG
Trigger: GCCAGTGCCCCACGGCACCCAGTGCCTGGCCATGGG...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGCTGCAGGACCTGGGCTaGGGGGTCGTGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: DATVFGEELLLSKDPPRGLQDLG*GVVGTH
Trigger: GTGGGTGCCCACGACCCCCCAGCCCAGGTCCTGCAG...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GCTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCCACACGGCGCAGCGTaGAACGGATCCAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: ASVQRSASRVWSQARGPGPHGAA*NGSSPR
Trigger: ACGTGGACTGGATCCGTTCCACGCTGCGCCGTGTGG...GCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGTTCAGGGGCGGCCCTTaGCCTCCACACGGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: RTPQCSGKSCFCPKIRLEFRGGP*PPHGAA
Trigger: CGCTGCGCCGTGTGGAGGCCAAGGGCCGCCCCTGAA...CTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGTTCAGGGGCGGCCCTTaGCCTCCACACGGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: GRHSVRGRAASVQRSASRFRGGP*PPHGAA
Trigger: CGCTGCGCCGTGTGGAGGCCAAGGGCCGCCCCTGAA...CCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGTGTGGCTGCGCCTCGTaGCCGCCCACGATCTCCGCA +
Preference number: 4 (lower is better)
Translates to: RTPQCSGKSCFCPKIRLECGCAS*PPTISA
Trigger: TGCGGAGATCGTGGGCGGGCACGAGGCGCAGCCACA...CTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGATGTGGCTGCGCCTCGTaGCCGCCCACGATCTCCGCA +
Preference number: 4 (lower is better)
Translates to: PDATVFGEELLLSKDPPRCGCAS*PPTISA
Trigger: TGCGGAGATCGTGGGCGGGCACGAGGCGCAGCCACA...TCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCTGCTGGGTGGGCTCCTaGGTCCGCACGTTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GPSRTPQCSGKSCFCPKICWVGS*VRTLWA
Trigger: AGCCCACAACGTGCGGACGCAGGAGCCCACCCAGCA...GATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCTGCTGGGTGGGCTCCTaGGTCCGCACGTTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GRPGRHSVRGRAASVQRSCWVGS*VRTLWA
Trigger: AGCCCACAACGTGCGGACGCAGGAGCCCACCCAGCA...GGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCGCCACCGAGAAGTGCTaGTGGGTGGGCTCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: RPGRHSVRGRAASVQRSAATEKC*WVGSCV
Trigger: GACGCAGGAGCCCACCCAGCAGCACTTCTCGGTGGC...GGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCACCGAGAAGTGCTGCTaGGTGGGCTCCTGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: RPGRHSVRGRAASVQRSATEKCC*VGSCVR
Trigger: GCGGACGCAGGAGCCCACCCAGCAGCACTTCTCGGT...GGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAAGGCACTGGGTGCCGTaGGGCACTGGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PDATVFGEELLLSKDPPRRHWVP*GTGWSC
Trigger: GCAGGACCAGCCAGTGCCCCACGGCACCCAGTGCCT...TCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGAGGCACTGGGTGCCGTaGGGCACTGGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: DATVFGEELLLSKDPPRGRHWVP*GTGWSC
Trigger: GCAGGACCAGCCAGTGCCCCACGGCACCCAGTGCCT...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp TCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTCAGGGAAAAGGCGGGTaGCACATCCCCAGATCACGA +
Preference number: 4 (lower is better)
Translates to: SKDPPRGFGARLGVPASAQGKGG*HIPRSR
Trigger: TCGTGATCTGGGGATGTGCCACCCGCCTTTTCCCTG...AGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGTCCGCCTCGAGGGTTTaGAGCCAGGCTCGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GRHSVRGRAASVQRSASRSASRV*SQARGP
Trigger: GGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGA...CCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGTGGCAGAGCAGCCCCTaGGCCTCTCCGAGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: DATVFGEELLLSKDPPRGWQSSP*ASPSLR
Trigger: ACGGAGGCTCGGAGAGGCCCAGGGGCTGCTCTGCCA...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544537.2
ENST00000622152.2
CDS-3UTR CCA 90 bp CGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGCCGGTGAGCCATGGTaGGGTCCAGGGTGCACCCAC +
Preference number: 4 (lower is better)
Translates to: RTPQCSGKSCFCPKIRLEAGEPW*GPGCTH
Trigger: GTGGGTGCACCCTGGACCCCACCATGGCTCACCGGC...CTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612112.4
CDS-3UTR TCA 90 bp TCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTGGCTGCTCAGCTGGATaGGGAGAACGTCGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SKDPPRGFGARLGVPASAGCSAG*GERRSV
Trigger: AACTGAACGACGTTCTCCTCATCCAGCTGAGCAGCC...AGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp GCTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCAGAGGGCTACCCGCGTaGAGAAGTCAGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: ASVQRSASRVWSQARGPGRGLPA*RSQGKG
Trigger: GCCTTTTCCCTGACTTCTTCACGCGGGTAGCCCTCT...GCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGTGCTGGGTGGGCTCCTaGGTCCGCACGTTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GRHSVRGRAASVQRSASRCWVGS*VRTLWA
Trigger: AGCCCACAACGTGCGGACGCAGGAGCCCACCCAGCA...CCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp TCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGCCACCGAGAAGTGCTaGTGGGTGGGCTCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: SRTPQCSGKSCFCPKIRLATEKC*WVGSCV
Trigger: GACGCAGGAGCCCACCCAGCAGCACTTCTCGGTGGC...GAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCGGCACTGGCTGGTCCTaGTGTGGCAGCTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: GPSRTPQCSGKSCFCPKIGTGWS*CGSWTV
Trigger: CACAGTCCAGCTGCCACAGCAGGACCAGCCAGTGCC...GATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCAGCAGATGCCGGCCTTaGGGCGAGGGACGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: GRPGRHSVRGRAASVQRSSRCRP*GEGRKC
Trigger: GCACTTTCGTCCCTCGCCGCAAGGCCGGCATCTGCT...GGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCAGTCTCCGAAGCAGATaGCGGCCTTGCGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: RPGRHSVRGRAASVQRSASLRSR*RPCGEG
Trigger: TCCCTCGCCGCAAGGCCGGCATCTGCTTCGGAGACT...GGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATACGTTCACCAGGCGCTaGGGTATGTCCCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GAVPDATVFGEELLLSKDTFTRR*GMSRRQ
Trigger: CTGCCTGCGGGACATACCCCAGCGCCTGGTGAACGT...ATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCAGAAGTGCTGCTGGGTaGGCTCCTGCGTCCGCACGT +
Preference number: 4 (lower is better)
Translates to: GRPGRHSVRGRAASVQRSRSAAG*APASAR
Trigger: ACGTGCGGACGCAGGAGCCCACCCAGCAGCACTTCT...GGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGACCGAGAAGTGCTGCTaGGTGGGCTCCTGCGTCCGC +
Preference number: 4 (lower is better)
Translates to: DATVFGEELLLSKDPPRGTEKCC*VGSCVR
Trigger: GCGGACGCAGGAGCCCACCCAGCAGCACTTCTCGGT...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATTCCTGCTGTGGCAGCTaGACTGTGGCGACGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GAVPDATVFGEELLLSKDSCCGS*TVATEA
Trigger: TGCCTCCGTCGCCACAGTCCAGCTGCCACAGCAGGA...ATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCCTGCTGTGGCAGCTaGACTGTGGCGACGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RPGRHSVRGRAASVQRSASCCGS*TVATEA
Trigger: TGCCTCCGTCGCCACAGTCCAGCTGCCACAGCAGGA...GGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCCAGGGAAAAGGCGGGTaGCACATCCCCAGATCACGA +
Preference number: 4 (lower is better)
Translates to: LLSKDPPRGFGARLGVPAQGKGG*HIPRSR
Trigger: TCGTGATCTGGGGATGTGCCACCCGCCTTTTCCCTG...GGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCACACGGCGCAGCGTaGAACGGATCCAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: GAVPDATVFGEELLLSKDPHGAA*NGSSPR
Trigger: ACGTGGACTGGATCCGTTCCACGCTGCGCCGTGTGG...ATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp CTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCTTGTTCAGAAACACCTaGGCCACCGAGAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSKDPPRGFGARLGVPASLFRNT*ATEKCC
Trigger: GCAGCACTTCTCGGTGGCTCAGGTGTTTCTGAACAA...GCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp GGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGATCAGGGGGCCACCTaGGTCTCCGAAGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: GRHSVRGRAASVQRSASRDQGAT*VSEADA
Trigger: GGCATCTGCTTCGGAGACTCAGGTGGCCCCCTGATC...CCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp TCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGATCAGGGGGCCACCTaGGTCTCCGAAGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: SRTPQCSGKSCFCPKIRLDQGAT*VSEADA
Trigger: GGCATCTGCTTCGGAGACTCAGGTGGCCCCCTGATC...GAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCTGGGGTGGATCAAGGTaGCTCCGCAGAAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRPGRHSVRGRAASVQRSWGGSR*LRRSGC
Trigger: GCAGCCACTTCTGCGGAGGCACCTTGATCCACCCCA...GGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATTGGGGTGGATCAAGGTaGCTCCGCAGAAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GAVPDATVFGEELLLSKDWGGSR*LRRSGC
Trigger: GCAGCCACTTCTGCGGAGGCACCTTGATCCACCCCA...ATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGGGCACTGGCTGGTCCTaGTGTGGCAGCTGGACTGTG +
Preference number: 4 (lower is better)
Translates to: DATVFGEELLLSKDPPRGGTGWS*CGSWTV
Trigger: CACAGTCCAGCTGCCACAGCAGGACCAGCCAGTGCC...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGAGCAGATGCCGGCCTTaGGGCGAGGGACGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: GRHSVRGRAASVQRSASRSRCRP*GEGRKC
Trigger: GCACTTTCGTCCCTCGCCGCAAGGCCGGCATCTGCT...CCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGAGCAGATGCCGGCCTTaGGGCGAGGGACGAAAGTGC +
Preference number: 4 (lower is better)
Translates to: RTPQCSGKSCFCPKIRLESRCRP*GEGRKC
Trigger: GCACTTTCGTCCCTCGCCGCAAGGCCGGCATCTGCT...CTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGATGGTGGGGTCCAGGGTaGACCCACGGTCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PDATVFGEELLLSKDPPRWWGPG*THGQAP
Trigger: AGGAGCTTGACCGTGGGTGCACCCTGGACCCCACCA...TCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612112.4
CDS-3UTR CCA 90 bp GGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATAGCACGAAGCTGGGGTaGATCAAGGTGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: GAVPDATVFGEELLLSKDSTKLG*IKVPPQ
Trigger: CTGCGGAGGCACCTTGATCCACCCCAGCTTCGTGCT...ATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTACGTTCACCAGGCGCTaGGGTATGTCCCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VPDATVFGEELLLSKDPPTFTRR*GMSRRQ
Trigger: CTGCCTGCGGGACATACCCCAGCGCCTGGTGAACGT...AGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGACGTTCACCAGGCGCTaGGGTATGTCCCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: DATVFGEELLLSKDPPRGTFTRR*GMSRRQ
Trigger: CTGCCTGCGGGACATACCCCAGCGCCTGGTGAACGT...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGATGCGTCCGCACGTTGTaGGCTCCGAGCACCACGTTC +
Preference number: 4 (lower is better)
Translates to: PDATVFGEELLLSKDPPRCVRTL*APSTTF
Trigger: GAACGTGGTGCTCGGAGCCCACAACGTGCGGACGCA...TCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTTGCGTCCGCACGTTGTaGGCTCCGAGCACCACGTTC +
Preference number: 4 (lower is better)
Translates to: VPDATVFGEELLLSKDPPCVRTL*APSTTF
Trigger: GAACGTGGTGCTCGGAGCCCACAACGTGCGGACGCA...AGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATGGCACTGAGGTTGGCTaGGCTGCTCAGCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: GAVPDATVFGEELLLSKDGTEVG*AAQLDE
Trigger: CTCATCCAGCTGAGCAGCCCAGCCAACCTCAGTGCC...ATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGACCACACGGCGCAGCGTaGAACGGATCCAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: PDATVFGEELLLSKDPPRPHGAA*NGSSPR
Trigger: ACGTGGACTGGATCCGTTCCACGCTGCGCCGTGTGG...TCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGCCACACGGCGCAGCGTaGAACGGATCCAGTCCACGT +
Preference number: 4 (lower is better)
Translates to: DATVFGEELLLSKDPPRGPHGAA*NGSSPR
Trigger: ACGTGGACTGGATCCGTTCCACGCTGCGCCGTGTGG...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp CCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTGAGTCTATTCCTTGGATaGTGCCATCACAGATCAGGG +
Preference number: 4 (lower is better)
Translates to: PKIRLEGLEPGSGSRPALSLFLG*CHHRSG
Trigger: CCCTGATCTGTGATGGCATCATCCAAGGAATAGACT...CAGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp GGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCAGAGGGCTACCCGCGTaGAGAAGTCAGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: GRPGRHSVRGRAASVQRSRGLPA*RSQGKG
Trigger: GCCTTTTCCCTGACTTCTTCACGCGGGTAGCCCTCT...GGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp CGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCAGAGGGCTACCCGCGTaGAGAAGTCAGGGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: RPGRHSVRGRAASVQRSARGLPA*RSQGKG
Trigger: GCCTTTTCCCTGACTTCTTCACGCGGGTAGCCCTCT...GGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGTGGGGTGGATCAAGGTaGCTCCGCAGAAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RTPQCSGKSCFCPKIRLEWGGSR*LRRSGC
Trigger: GCAGCCACTTCTGCGGAGGCACCTTGATCCACCCCA...CTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp CCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGATGGGGTGGATCAAGGTaGCTCCGCAGAAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PDATVFGEELLLSKDPPRWGGSR*LRRSGC
Trigger: GCAGCCACTTCTGCGGAGGCACCTTGATCCACCCCA...TCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GCTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCTGTTCGGGGAAGAGCTaGTTCTGTCCAAAGATCCGC +
Preference number: 4 (lower is better)
Translates to: ASVQRSASRVWSQARGPGCSGKS*FCPKIR
Trigger: GCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACA...GCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGAGCACGAAGCTGGGGTaGATCAAGGTGCCTCCGCAG +
Preference number: 4 (lower is better)
Translates to: RTPQCSGKSCFCPKIRLESTKLG*IKVPPQ
Trigger: CTGCGGAGGCACCTTGATCCACCCCAGCTTCGTGCT...CTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGCCGTCAGCACGAAGCTaGGGTGGATCAAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: DATVFGEELLLSKDPPRGPSARS*GGSRCL
Trigger: GAGGCACCTTGATCCACCCCAGCTTCGTGCTGACGG...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGCCGTCAGCACGAAGCTaGGGTGGATCAAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GRHSVRGRAASVQRSASRPSARS*GGSRCL
Trigger: GAGGCACCTTGATCCACCCCAGCTTCGTGCTGACGG...CCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATGCTGGGCTGCTCAGCTaGATGAGGAGAACGTCGTTC +
Preference number: 4 (lower is better)
Translates to: GAVPDATVFGEELLLSKDAGLLS*MRRTSF
Trigger: GAACGACGTTCTCCTCATCCAGCTGAGCAGCCCAGC...ATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGGGCACTGAGGTTGGCTaGGCTGCTCAGCTGGATGAG +
Preference number: 4 (lower is better)
Translates to: DATVFGEELLLSKDPPRGGTEVG*AAQLDE
Trigger: CTCATCCAGCTGAGCAGCCCAGCCAACCTCAGTGCC...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCAGGGAAAAGGCGGGTaGCACATCCCCAGATCACGA +
Preference number: 4 (lower is better)
Translates to: GAVPDATVFGEELLLSKDQGKGG*HIPRSR
Trigger: TCGTGATCTGGGGATGTGCCACCCGCCTTTTCCCTG...ATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCCAGGGAAAAGGCGGGTaGCACATCCCCAGATCACGA +
Preference number: 4 (lower is better)
Translates to: GRPGRHSVRGRAASVQRSQGKGG*HIPRSR
Trigger: TCGTGATCTGGGGATGTGCCACCCGCCTTTTCCCTG...GGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp TCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCTTATTGAGGTCACGGTaGGGTGAGGTGCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SRTPQCSGKSCFCPKIRLLLRSR*GEVQGR
Trigger: CCGGCCCTGCACCTCACCCCACCGTGACCTCAATAA...GAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGTTATTGAGGTCACGGTaGGGTGAGGTGCAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GRHSVRGRAASVQRSASRLLRSR*GEVQGR
Trigger: CCGGCCCTGCACCTCACCCCACCGTGACCTCAATAA...CCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGCTGGGCTGCTCAGCTaGATGAGGAGAACGTCGTTC +
Preference number: 4 (lower is better)
Translates to: RTPQCSGKSCFCPKIRLEAGLLS*MRRTSF
Trigger: GAACGACGTTCTCCTCATCCAGCTGAGCAGCCCAGC...CTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTGCTGGGCTGCTCAGCTaGATGAGGAGAACGTCGTTC +
Preference number: 4 (lower is better)
Translates to: VPDATVFGEELLLSKDPPAGLLS*MRRTSF
Trigger: GAACGACGTTCTCCTCATCCAGCTGAGCAGCCCAGC...AGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGCTGGGCTGCTCAGCTaGATGAGGAGAACGTCGTTC +
Preference number: 4 (lower is better)
Translates to: GRHSVRGRAASVQRSASRAGLLS*MRRTSF
Trigger: GAACGACGTTCTCCTCATCCAGCTGAGCAGCCCAGC...CCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp GGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCTTGTTCAGAAACACCTaGGCCACCGAGAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GPSRTPQCSGKSCFCPKILFRNT*ATEKCC
Trigger: GCAGCACTTCTCGGTGGCTCAGGTGTTTCTGAACAA...GATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp GGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCTTGTTCAGAAACACCTaGGCCACCGAGAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GRPGRHSVRGRAASVQRSLFRNT*ATEKCC
Trigger: GCAGCACTTCTCGGTGGCTCAGGTGTTTCTGAACAA...GGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GCTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCAGTGCAAATGTTATGTaGCCGGCAGAAGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: ASVQRSASRVWSQARGPGSANVM*PAEEGD
Trigger: GTCACCTTCTTCTGCCGGCCACATAACATTTGCACT...GCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp GGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGTTGTTCAGAAACACCTaGGCCACCGAGAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GRHSVRGRAASVQRSASRLFRNT*ATEKCC
Trigger: GCAGCACTTCTCGGTGGCTCAGGTGTTTCTGAACAA...CCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp GGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGTGTTCGGGGAAGAGCTaGTTCTGTCCAAAGATCCGC +
Preference number: 4 (lower is better)
Translates to: GRHSVRGRAASVQRSASRCSGKS*FCPKIR
Trigger: GCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACA...CCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR GCA 90 bp TCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCTGTTCGGGGAAGAGCTaGTTCTGTCCAAAGATCCGC +
Preference number: 4 (lower is better)
Translates to: SRTPQCSGKSCFCPKIRLCSGKS*FCPKIR
Trigger: GCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACA...GAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR TCA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGAGTCTATTCCTTGGATaGTGCCATCACAGATCAGGG +
Preference number: 4 (lower is better)
Translates to: DATVFGEELLLSKDPPRGSLFLG*CHHRSG
Trigger: CCCTGATCTGTGATGGCATCATCCAAGGAATAGACT...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGAGTGCAAATGTTATGTaGCCGGCAGAAGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: RTPQCSGKSCFCPKIRLESANVM*PAEEGD
Trigger: GTCACCTTCTTCTGCCGGCCACATAACATTTGCACT...CTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGAGTGCAAATGTTATGTaGCCGGCAGAAGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: DATVFGEELLLSKDPPRGSANVM*PAEEGD
Trigger: GTCACCTTCTTCTGCCGGCCACATAACATTTGCACT...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATAAGGAGTCTATTCCTTaGATGATGCCATCACAGATC +
Preference number: 4 (lower is better)
Translates to: GAVPDATVFGEELLLSKDKESIP*MMPSQI
Trigger: GATCTGTGATGGCATCATCCAAGGAATAGACTCCTT...ATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGAAGGAGTCTATTCCTTaGATGATGCCATCACAGATC +
Preference number: 4 (lower is better)
Translates to: DATVFGEELLLSKDPPRGKESIP*MMPSQI
Trigger: GATCTGTGATGGCATCATCCAAGGAATAGACTCCTT...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CCA 90 bp CGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGAAGGAGTCTATTCCTTaGATGATGCCATCACAGATC +
Preference number: 4 (lower is better)
Translates to: RTPQCSGKSCFCPKIRLEKESIP*MMPSQI
Trigger: GATCTGTGATGGCATCATCCAAGGAATAGACTCCTT...CTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS CCA 90 bp GGGTCCCGGCCAGCGCTGTGGGAGGGGCGGTTCAGGGGCGGCCCTTaGCCTCCACACGGCGCAGCGTGGAACGGATCCAGTCCACGTAGA +
Preference number: 5 (lower is better)
Translates to: GSRPALWEGRFRGGP*PPHGAAWNGSSPRR
Trigger: TCTACGTGGACTGGATCCGTTCCACGCTGCGCCGTGTGGAGGCCAAGGGCCGCCCCTGAACCGCCCCTCCCACAGCGCTGGCCGGGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp CCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTGATCCGCCTCGAGGGTTaGGAGCCAGGCTCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PKIRLEGLEPGSGSRPALIRLEG*EPGSGS
Trigger: GGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGAT...CAGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS CCA 90 bp GCCACCGAGAAGTGCTGCTGGGTGGGCTCCTGCGTCCGCACGTTGTaGGCTCCGAGCACCACGTTCACCAGGCGCTGGGGTATGTCCCGC +
Preference number: 5 (lower is better)
Translates to: ATEKCCWVGSCVRTL*APSTTFTRRWGMSR
Trigger: GCGGGACATACCCCAGCGCCTGGTGAACGTGGTGCTCGGAGCCCACAACGTGCGGACGCAGGAGCCCACCCAGCAGCACTTCTCGGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS CCA 90 bp AGGCACTGGGTGCCGTGGGGCACTGGCTGGTCCTGCTGTGGCAGCTaGACTGTGGCGACGGAGGCACTGAGGTTGGCTGGGCTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RHWVPWGTGWSCCGS*TVATEALRLAGLLS
Trigger: GCTGAGCAGCCCAGCCAACCTCAGTGCCTCCGTCGCCACAGTCCAGCTGCCACAGCAGGACCAGCCAGTGCCCCACGGCACCCAGTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp TCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTTCCTGCGTCCGCACGTaGTGGGCTCCGAGCACCACG +
Preference number: 5 (lower is better)
Translates to: SKDPPRGFGARLGVPASASCVRT*WAPSTT
Trigger: CGTGGTGCTCGGAGCCCACAACGTGCGGACGCAGGA...AGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp TCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTATCCGCCTCGAGGGTTaGGAGCCAGGCTCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SKDPPRGFGARLGVPASAIRLEG*EPGSGS
Trigger: GGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGAT...AGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp CCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTGAAGCAGATGCCGGCCTaGCGGCGAGGGACGAAAGTG +
Preference number: 5 (lower is better)
Translates to: PKIRLEGLEPGSGSRPALKQMPA*RRGTKV
Trigger: CACTTTCGTCCCTCGCCGCAAGGCCGGCATCTGCTT...CAGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp CGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCGTTCAGGGGCGGCCCTaGGCCTCCACACGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: RPGRHSVRGRAASVQRSAVQGRP*ASTRRS
Trigger: GCTGCGCCGTGTGGAGGCCAAGGGCCGCCCCTGAAC...GGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp GGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCGTTCAGGGGCGGCCCTaGGCCTCCACACGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: GPSRTPQCSGKSCFCPKIVQGRP*ASTRRS
Trigger: GCTGCGCCGTGTGGAGGCCAAGGGCCGCCCCTGAAC...GATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp GGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGTTCAGGGGCGGCCCTaGGCCTCCACACGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: GRPGRHSVRGRAASVQRSVQGRP*ASTRRS
Trigger: GCTGCGCCGTGTGGAGGCCAAGGGCCGCCCCTGAAC...GGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp CTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCATCCGCCTCGAGGGTTaGGAGCCAGGCTCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: LLSKDPPRGFGARLGVPAIRLEG*EPGSGS
Trigger: GGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGAT...GGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp GGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGTTCAGGGGCGGCCCTaGGCCTCCACACGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: GRHSVRGRAASVQRSASRVQGRP*ASTRRS
Trigger: GCTGCGCCGTGTGGAGGCCAAGGGCCGCCCCTGAAC...CCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp GGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCTCCTGCGTCCGCACGTaGTGGGCTCCGAGCACCACG +
Preference number: 5 (lower is better)
Translates to: GRPGRHSVRGRAASVQRSSCVRT*WAPSTT
Trigger: CGTGGTGCTCGGAGCCCACAACGTGCGGACGCAGGA...GGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp CCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGATCCTGCGTCCGCACGTaGTGGGCTCCGAGCACCACG +
Preference number: 5 (lower is better)
Translates to: PDATVFGEELLLSKDPPRSCVRT*WAPSTT
Trigger: CGTGGTGCTCGGAGCCCACAACGTGCGGACGCAGGA...TCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp GGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCACGGAGGCACTGAGGTaGGCTGGGCTGCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GPSRTPQCSGKSCFCPKITEALR*AGLLSW
Trigger: CCAGCTGAGCAGCCCAGCCAACCTCAGTGCCTCCGT...GATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp TCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCATCCGCCTCGAGGGTTaGGAGCCAGGCTCGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SRTPQCSGKSCFCPKIRLIRLEG*EPGSGS
Trigger: GGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGAT...GAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp GACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGACGGAGGCACTGAGGTaGGCTGGGCTGCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: DATVFGEELLLSKDPPRGTEALR*AGLLSW
Trigger: CCAGCTGAGCAGCCCAGCCAACCTCAGTGCCTCCGT...CCCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp GGGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATAAGCAGATGCCGGCCTaGCGGCGAGGGACGAAAGTG +
Preference number: 5 (lower is better)
Translates to: GAVPDATVFGEELLLSKDKQMPA*RRGTKV
Trigger: CACTTTCGTCCCTCGCCGCAAGGCCGGCATCTGCTT...ATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp GGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGAAGCAGATGCCGGCCTaGCGGCGAGGGACGAAAGTG +
Preference number: 5 (lower is better)
Translates to: GRHSVRGRAASVQRSASRKQMPA*RRGTKV
Trigger: CACTTTCGTCCCTCGCCGCAAGGCCGGCATCTGCTT...CCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp CGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGAAGCAGATGCCGGCCTaGCGGCGAGGGACGAAAGTG +
Preference number: 5 (lower is better)
Translates to: RTPQCSGKSCFCPKIRLEKQMPA*RRGTKV
Trigger: CACTTTCGTCCCTCGCCGCAAGGCCGGCATCTGCTT...CTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS CCA 90 bp CGTAGTTGTTCAGAAACACCTGAGCCACCGAGAAGTGCTGCTGGGTaGGCTCCTGCGTCCGCACGTTGTGGGCTCCGAGCACCACGTTCA +
Preference number: 5 (lower is better)
Translates to: RSCSETPEPPRSAAG*APASARCGLRAPRS
Trigger: TGAACGTGGTGCTCGGAGCCCACAACGTGCGGACGCAGGAGCCCACCCAGCAGCACTTCTCGGTGGCTCAGGTGTTTCTGAACAACTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp TCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCCAGCGCTGAAGGAGTCTATTCCTaGGATGATGCCATCACAGAT +
Preference number: 5 (lower is better)
Translates to: SKDPPRGFGARLGVPASAEGVYS*DDAITD
Trigger: ATCTGTGATGGCATCATCCAAGGAATAGACTCCTTC...AGCGCTGGCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp GCTTCTGTCCAAAGATCCGCCTCGAGGGTTTGGAGCCAGGCTCGGGGTCCCGGCGAAGGAGTCTATTCCTaGGATGATGCCATCACAGAT +
Preference number: 5 (lower is better)
Translates to: ASVQRSASRVWSQARGPGEGVYS*DDAITD
Trigger: ATCTGTGATGGCATCATCCAAGGAATAGACTCCTTC...GCCGGGACCCCGAGCCTGGCTCCAAACCCTCGAGGCGGATCTTTGGACAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp GGGCCGTCCCGGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCGAAGGAGTCTATTCCTaGGATGATGCCATCACAGAT +
Preference number: 5 (lower is better)
Translates to: GPSRTPQCSGKSCFCPKIEGVYS*DDAITD
Trigger: ATCTGTGATGGCATCATCCAAGGAATAGACTCCTTC...GATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCCGGGACGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS-3UTR CAA 90 bp GGACGCCACAGTGTTCGGGGAAGAGCTGCTTCTGTCCAAAGATCCGCCTCGAGGGAAGGAGTCTATTCCTaGGATGATGCCATCACAGAT +
Preference number: 5 (lower is better)
Translates to: GRHSVRGRAASVQRSASREGVYS*DDAITD
Trigger: ATCTGTGATGGCATCATCCAAGGAATAGACTCCTTC...CCTCGAGGCGGATCTTTGGACAGAAGCAGCTCTTCCCCGAACACTGTGGCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS CAA 72 bp GCCAGCGCTGTGGGAGGGGCGGTTCAGGGGCGGCCCTaGGCCTCCACACGGCGCAGCGTGGAACGGATCCAG +
Preference number: 6 (lower is better)
Translates to: ASAVGGAVQGRP*ASTRRSVERIQ
Trigger: CTGGATCCGTTCCACGCTGCGCCGTGTGGAGGCCAAGGGCCGCCCCTGAACCGCCCCTCCCACAGCGCTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS CCA 72 bp CCAGCGCTGTGGGAGGGGCGGTTCAGGGGCGGCCCTTaGCCTCCACACGGCGCAGCGTGGAACGGATCCAGT +
Preference number: 6 (lower is better)
Translates to: PALWEGRFRGGP*PPHGAAWNGSS
Trigger: ACTGGATCCGTTCCACGCTGCGCCGTGTGGAGGCCAAGGGCCGCCCCTGAACCGCCCCTCCCACAGCGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS CCA 72 bp TTCAGGGGCGGCCCTTGGCCTCCACACGGCGCAGCGTaGAACGGATCCAGTCCACGTAGAGGGCTACCCGCG +
Preference number: 6 (lower is better)
Translates to: FRGGPWPPHGAA*NGSSPRRGLPA
Trigger: CGCGGGTAGCCCTCTACGTGGACTGGATCCGTTCCACGCTGCGCCGTGTGGAGGCCAAGGGCCGCCCCTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS CCA 72 bp ACGAAGCTGGGGTGGATCAAGGTGCCTCCGCAGAAGTaGCTGCCCGGGTTCCCCCGCATCTGCAGGGAGGCC +
Preference number: 6 (lower is better)
Translates to: TKLGWIKVPPQK*LPGFPRICREA
Trigger: GGCCTCCCTGCAGATGCGGGGGAACCCGGGCAGCCACTTCTGCGGAGGCACCTTGATCCACCCCAGCTTCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS CCA 72 bp TCAGAAACACCTGAGCCACCGAGAAGTGCTGCTGGGTaGGCTCCTGCGTCCGCACGTTGTGGGCTCCGAGCA +
Preference number: 6 (lower is better)
Translates to: SETPEPPRSAAG*APASARCGLRA
Trigger: TGCTCGGAGCCCACAACGTGCGGACGCAGGAGCCCACCCAGCAGCACTTCTCGGTGGCTCAGGTGTTTCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS CAA 72 bp AGGGGGCCACCTGAGTCTCCGAAGCAGATGCCGGCCTaGCGGCGAGGGACGAAAGTGCAAATGTTATGTGGC +
Preference number: 6 (lower is better)
Translates to: RGPPESPKQMPA*RRGTKVQMLCG
Trigger: GCCACATAACATTTGCACTTTCGTCCCTCGCCGCAAGGCCGGCATCTGCTTCGGAGACTCAGGTGGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS CCA 72 bp GGCCTTGCGGCGAGGGACGAAAGTGCAAATGTTATGTaGCCGGCAGAAGAAGGTGACCACGGTGACATTGAG +
Preference number: 6 (lower is better)
Translates to: GLAARDESANVM*PAEEGDHGDIE
Trigger: CTCAATGTCACCGTGGTCACCTTCTTCTGCCGGCCACATAACATTTGCACTTTCGTCCCTCGCCGCAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2
CDS TCA 72 bp CACATCCCCAGATCACGAAGGAGTCTATTCCTTGGATaGTGCCATCACAGATCAGGGGGCCACCTGAGTCTC +
Preference number: 6 (lower is better)
Translates to: HIPRSRRSLFLG*CHHRSGGHLSL
Trigger: GAGACTCAGGTGGCCCCCTGATCTGTGATGGCATCATCCAAGGAATAGACTCCTTCGTGATCTGGGGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234347.10
ENST00000544537.2
ENST00000612112.4
ENST00000622152.2