Pregenerated sensors for PRTFDC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000099256Ensembl transcript IDs: ENST00000320152.11, ENST00000376376.3, ENST00000376378.5
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AACTTGACAGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGACTAAATATGATGCTATCTaGGACTTTAGTGGTGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: NLTAGFPSTGVNMMLSGTKYDAI*DFSGEN Trigger: ATTCTCACCACTAAAGTCCCAGATAGCATCATATTT...AGTCCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCTGTCAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| 3UTR CAA 90 bp | CATAACATCATTAAGATTCATTGTACACTGCGTTTCAGAAAGGCTTaGTCAAAGCAGATAATAATGGCCTGTCAGAAATGCACAAACAGA | + |
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Preference number: 2 (lower is better) Translates to: HNIIKIHCTLRFRKA*SKQIIMACQKCTNR Trigger: TCTGTTTGTGCATTTCTGACAGGCCATTATTATCTGCTTTGACAAAGCCTTTCTGAAACGCAGTGTACAATGAATCTTAATGATGTTATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR CCA 90 bp | TTGAAGACAGTGAGCCCTAGAATGGTCCAGGTGCTACTGTACACCTCACTGGATGCCTCGCCCGTAGTCTaGCGCCTCCTCGCTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LKTVSPRMVQVLLYTSLDASPVV*RLLAAP Trigger: GGGAGCAGCGAGGAGGCGCCAGACTACGGGCGAGGC...ATCCAGTGAGGTGTACAGTAGCACCTGGACCATTCTAGGGCTCACTGTCTTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR CCA 90 bp | CTTGACAGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTGCCTCGCCCGTAGTCTaGCGCCTCCTCGCTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LDSWLPKYRRKYDAIWDFASPVV*RLLAAP Trigger: GGGAGCAGCGAGGAGGCGCCAGACTACGGGCGAGGC...AAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCTGTCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS-3UTR CCA 90 bp | TGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTAGTGGTGAGGCCTCGCCCGTAGTCTaGCGCCTCCTCGCTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: WLPKYRRKYDAIWDFSGEASPVV*RLLAAP Trigger: GGGAGCAGCGAGGAGGCGCCAGACTACGGGCGAGGC...CTCACCACTAAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS-3UTR GCA 90 bp | ACAGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTAGTGCTGGCGCCTCCTCGCTaGTCCCGGCCATGTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TAGFPSTGVNMMLSGTLVLAPPR*SRPCFS Trigger: GGAGAAACATGGCCGGGAGCAGCGAGGAGGCGCCAG...CACTAAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS-3UTR GCA 90 bp | TTGACAGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTACTGGCGCCTCCTCGCTaGTCCCGGCCATGTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LTAGFPSTGVNMMLSGTLLAPPR*SRPCFS Trigger: GGAGAAACATGGCCGGGAGCAGCGAGGAGGCGCCAG...TAAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCTGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS-3UTR CCA 90 bp | CAGGGCTTGAAGACAGTGAGCCCTAGAATGGTCCAGGTGCTACTGTACACCTCATCTCCAGAGGGTATTTaGAGATTCTTGCAGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: QGLKTVSPRMVQVLLYTSSPEGI*RFLQGS Trigger: GCTCCCCTGCAAGAATCTCCAAATACCCTCTGGAGA...TGAGGTGTACAGTAGCACCTGGACCATTCTAGGGCTCACTGTCTTCAAGCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR TCA 90 bp | AGGAAGGCGGAGCTCAGGAGTGTGAAGGTAGATAGCATTGCTGAGTCACAAGGCTCCACAATGATACCATaGGGGATGAGGACATACTCC | + |
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Preference number: 4 (lower is better) Translates to: RKAELRSVKVDSIAESQGSTMIP*GMRTYS Trigger: GGAGTATGTCCTCATCCCTCATGGTATCATTGTGGA...GCCTTGTGACTCAGCAATGCTATCTACCTTCACACTCCTGAGCTCCGCCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR GCA 90 bp | AAGCAAGAAGAAATACATCATCCAGCAGACACAGTGTCCAGTTTCTTCATGAAGCTGGCGCCTCCTCGCTaGTCCCGGCCATGTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: KQEEIHHPADTVSSFFMKLAPPR*SRPCFS Trigger: GGAGAAACATGGCCGGGAGCAGCGAGGAGGCGCCAG...CTTCATGAAGAAACTGGACACTGTGTCTGCTGGATGATGTATTTCTTCTTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR TCA 90 bp | ACAGTGAGCCCTAGAATGGTCCAGGTGCTACTGTACACCTCACTGGATCTCAGATCCACAATGATACCATaGGGGATGAGGACATACTCC | + |
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Preference number: 4 (lower is better) Translates to: TVSPRMVQVLLYTSLDLRSTMIP*GMRTYS Trigger: GGAGTATGTCCTCATCCCTCATGGTATCATTGTGGA...TCTGAGATCCAGTGAGGTGTACAGTAGCACCTGGACCATTCTAGGGCTCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR TCA 90 bp | TTGAAGACAGTGAGCCCTAGAATGGTCCAGGTGCTACTGTACACCTCACTGGATCTACTCATATACCCTTaGCTGAAGGCCAGTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LKTVSPRMVQVLLYTSLDLLIYP*LKASPP Trigger: AGGAGGACTGGCCTTCAGTCAAGGGTATATGAGTAG...ATCCAGTGAGGTGTACAGTAGCACCTGGACCATTCTAGGGCTCACTGTCTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR TCA 90 bp | TTGAAGACAGTGAGCCCTAGAATGGTCCAGGTGCTACTGTACACCTCACTGGATTGTCCAGTTTCTTCATaGAGACTGTGGGCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LKTVSPRMVQVLLYTSLDCPVSS*RLWAQP Trigger: TGGCTGTGCCCACAGTCTTCATGAAGAAACTGGACA...ATCCAGTGAGGTGTACAGTAGCACCTGGACCATTCTAGGGCTCACTGTCTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR GCA 90 bp | GGGGACAAACTTGACAGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTCGCCTCCGATTATCTaGATCTCACCCATGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: GDKLDSWLPKYRRKYDAISPPII*ISPMDW Trigger: CCAGTCCATGGGTGAGATGCAGATAATCGGAGGCGA...GATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCTGTCAAGTTTGTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS-3UTR TCA 90 bp | AGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTAGTGGTCTTTCCAGCCAGCGTTaGAAGATCATCGCCTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: SWLPKYRRKYDAIWDFSGLSSQR*KIIASD Trigger: ATCGGAGGCGATGATCTTTCAACGCTGGCTGGAAAG...ACCACTAAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS-3UTR TCA 90 bp | CTTGACAGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTCTTTCCAGCCAGCGTTaGAAGATCATCGCCTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: LDSWLPKYRRKYDAIWDFLSSQR*KIIASD Trigger: ATCGGAGGCGATGATCTTTCAACGCTGGCTGGAAAG...AAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCTGTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS-3UTR GCA 90 bp | AGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTAGTGGTTCGCCTCCGATTATCTaGATCTCACCCATGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: SWLPKYRRKYDAIWDFSGSPPII*ISPMDW Trigger: CCAGTCCATGGGTGAGATGCAGATAATCGGAGGCGA...ACCACTAAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS-3UTR GCA 90 bp | TTGAAGACAGTGAGCCCTAGAATGGTCCAGGTGCTACTGTACACCTCACTGGATGTATTTGGAGATTCTTaGAGGGGAGCACAGCTACTC | + |
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Preference number: 4 (lower is better) Translates to: LKTVSPRMVQVLLYTSLDVFGDS*RGAQLL Trigger: GAGTAGCTGTGCTCCCCTGCAAGAATCTCCAAATAC...ATCCAGTGAGGTGTACAGTAGCACCTGGACCATTCTAGGGCTCACTGTCTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR CCA 90 bp | GGGGACAAACTTGACAGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCGACAAACTTGACAGCTaGCTTCCCAAGTACAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: GDKLDSWLPKYRRKYDAIDKLDS*LPKYRR Trigger: ACGCCTGTACTTGGGAAGCCAGCTGTCAAGTTTGTC...GATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCTGTCAAGTTTGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS-3UTR CCA 90 bp | ACAGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTAGTGCTGAGTGAAGATGCCTaGGGGGACAAACTTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: TAGFPSTGVNMMLSGTLVLSEDA*GDKLDS Trigger: GCTGTCAAGTTTGTCCCCCCAGGCATCTTCACTCAG...CACTAAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS-3UTR TCA 90 bp | TTGAAGACAGTGAGCCCTAGAATGGTCCAGGTGCTACTGTACACCTCACTGGATAGTGCTGTGGGTACGTaGATAAATTCAAGTCATACC | + |
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Preference number: 4 (lower is better) Translates to: LKTVSPRMVQVLLYTSLDSAVGT*INSSHT Trigger: GGTATGACTTGAATTTATTCACGTACCCACAGCACT...ATCCAGTGAGGTGTACAGTAGCACCTGGACCATTCTAGGGCTCACTGTCTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR TCA 90 bp | GGGGACAAACTTGACAGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCCTTAGTTTCGAGCATTaGAAGCACTCGCCCCTAATT | + |
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Preference number: 4 (lower is better) Translates to: GDKLDSWLPKYRRKYDAILSFEH*KHSPLI Trigger: AATTAGGGGCGAGTGCTTTCAATGCTCGAAACTAAG...GATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCTGTCAAGTTTGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR CCA 90 bp | TTGAAGACAGTGAGCCCTAGAATGGTCCAGGTGCTACTGTACACCTCACTGGATTACTGTACACCTCACTaGATCTCAGACCTAATTCTG | + |
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Preference number: 4 (lower is better) Translates to: LKTVSPRMVQVLLYTSLDYCTPH*ISDLIL Trigger: CAGAATTAGGTCTGAGATCCAGTGAGGTGTACAGTA...ATCCAGTGAGGTGTACAGTAGCACCTGGACCATTCTAGGGCTCACTGTCTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR TCA 90 bp | AGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTAGTGGTGCACACACAGGACCATaGTGTCACTATATCCTATGT | + |
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Preference number: 4 (lower is better) Translates to: SWLPKYRRKYDAIWDFSGAHTGP*CHYILC Trigger: ACATAGGATATAGTGACATCATGGTCCTGTGTGTGC...ACCACTAAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS-3UTR CCA 90 bp | TTGAAGACAGTGAGCCCTAGAATGGTCCAGGTGCTACTGTACACCTCACTGGATATTCAAGTCATACCCTaGCCAATCATCCATAATCAC | + |
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Preference number: 4 (lower is better) Translates to: LKTVSPRMVQVLLYTSLDIQVIP*PIIHNH Trigger: GTGATTATGGATGATTGGCCAGGGTATGACTTGAAT...ATCCAGTGAGGTGTACAGTAGCACCTGGACCATTCTAGGGCTCACTGTCTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR TCA 90 bp | AAGCAAGAAGAAATACATCATCCAGCAGACACAGTGTCCAGTTTCTTCATGAAGTGTGGAAACAGGGAATaGGCACTTGGAGGTAACCTC | + |
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Preference number: 4 (lower is better) Translates to: KQEEIHHPADTVSSFFMKCGNRE*ALGGNL Trigger: GAGGTTACCTCCAAGTGCTCATTCCCTGTTTCCACA...CTTCATGAAGAAACTGGACACTGTGTCTGCTGGATGATGTATTTCTTCTTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR GCA 90 bp | ACAAACTTGACAGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGGAATCTATTAATAGCTaGATTCCCGGTATAGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: TNLTAGFPSTGVNMMLSGESINS*IPGIGD Trigger: GTCCCCTATACCGGGAATGCAGCTATTAATAGATTC...CCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCTGTCAAGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR GCA 90 bp | AAGCAAGAAGAAATACATCATCCAGCAGACACAGTGTCCAGTTTCTTCATGAAGCTAGAATGGTCCAGGTaGTACTGTACACCTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: KQEEIHHPADTVSSFFMKLEWSR*YCTPHW Trigger: CCAGTGAGGTGTACAGTAGCACCTGGACCATTCTAG...CTTCATGAAGAAACTGGACACTGTGTCTGCTGGATGATGTATTTCTTCTTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR TCA 90 bp | AACCTCAAGCAAGAAGAAATACATCATCCAGCAGACACAGTGTCCAGTTTCTTCGCACACACAGGACCATaGTGTCACTATATCCTATGT | + |
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Preference number: 4 (lower is better) Translates to: NLKQEEIHHPADTVSSFFAHTGP*CHYILC Trigger: ACATAGGATATAGTGACATCATGGTCCTGTGTGTGC...GAAGAAACTGGACACTGTGTCTGCTGGATGATGTATTTCTTCTTGCTTGAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR TCA 90 bp | AACCTCAAGCAAGAAGAAATACATCATCCAGCAGACACAGTGTCCAGTTTCTTCTCTGATCTTGGTAACTaGAACCGGATGTGGAAACAG | + |
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Preference number: 4 (lower is better) Translates to: NLKQEEIHHPADTVSSFFSDLGN*NRMWKQ Trigger: CTGTTTCCACATCCGGTTTCAGTTACCAAGATCAGA...GAAGAAACTGGACACTGTGTCTGCTGGATGATGTATTTCTTCTTGCTTGAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR CCA 90 bp | TTGACAGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTAATTCAAGTCATACCCTaGCCAATCATCCATAATCAC | + |
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Preference number: 4 (lower is better) Translates to: LTAGFPSTGVNMMLSGTLIQVIP*PIIHNH Trigger: GTGATTATGGATGATTGGCCAGGGTATGACTTGAAT...TAAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCTGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS-3UTR CCA 90 bp | AAAGCTCGTTTCATAACATCATTAAGATTCATTGTACACTGCGTTTCAGAAAGGCTGAGTGAAGATGCCTaGGGGGACAAACTTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: KARFITSLRFIVHCVSERLSEDA*GDKLDS Trigger: GCTGTCAAGTTTGTCCCCCCAGGCATCTTCACTCAG...CCTTTCTGAAACGCAGTGTACAATGAATCTTAATGATGTTATGAAACGAGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR CCA 90 bp | AAAGCTCGTTTCATAACATCATTAAGATTCATTGTACACTGCGTTTCAGAAAGGGACAAACTTGACAGCTaGCTTCCCAAGTACAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: KARFITSLRFIVHCVSERDKLDS*LPKYRR Trigger: ACGCCTGTACTTGGGAAGCCAGCTGTCAAGTTTGTC...CCTTTCTGAAACGCAGTGTACAATGAATCTTAATGATGTTATGAAACGAGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR TCA 90 bp | TACAGGCGTAAATATGATGCTATCTGGGACTTTAGTGGTGAGAATTCATGTCTTAGTGCTGTGGGTACGTaGATAAATTCAAGTCATACC | + |
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Preference number: 4 (lower is better) Translates to: YRRKYDAIWDFSGENSCLSAVGT*INSSHT Trigger: GGTATGACTTGAATTTATTCACGTACCCACAGCACT...AAGACATGAATTCTCACCACTAAAGTCCCAGATAGCATCATATTTACGCCTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376378.5 |
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| CDS-3UTR TCA 90 bp | ATGATGCTATCTGGGACTTTAGTGGTGAGAATTCATGTCTTTAGACTCGATATTGCACACACAGGACCATaGTGTCACTATATCCTATGT | + |
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Preference number: 4 (lower is better) Translates to: MMLSGTLVVRIHVFRLDIAHTGP*CHYILC Trigger: ACATAGGATATAGTGACATCATGGTCCTGTGTGTGC...AATATCGAGTCTAAAGACATGAATTCTCACCACTAAAGTCCCAGATAGCATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376378.5 |
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| CDS-3UTR GCA 90 bp | TTGACAGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTATATTTTTCTTTACCGTaGTCATTGATGACGCATATG | + |
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Preference number: 4 (lower is better) Translates to: LTAGFPSTGVNMMLSGTLYFSLP*SLMTHM Trigger: CATATGCGTCATCAATGAGCACGGTAAAGAAAAATA...TAAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCTGTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS-3UTR GCA 90 bp | CCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTAGTGGTGAGAATTCATAGATTCATTGTACACTaGGTTTCAGAAAGGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: PSTGVNMMLSGTLVVRIHRFIVH*VSERLC Trigger: ACAAAGCCTTTCTGAAACGCAGTGTACAATGAATCT...ATGAATTCTCACCACTAAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR TCA 90 bp | AAAGCTCGTTTCATAACATCATTAAGATTCATTGTACACTGCGTTTCAGAAAGGAGTGCTGTGGGTACGTaGATAAATTCAAGTCATACC | + |
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Preference number: 4 (lower is better) Translates to: KARFITSLRFIVHCVSERSAVGT*INSSHT Trigger: GGTATGACTTGAATTTATTCACGTACCCACAGCACT...CCTTTCTGAAACGCAGTGTACAATGAATCTTAATGATGTTATGAAACGAGCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR CCA 90 bp | CCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTAGTGGTGAGAATTCATAAATATGATGCTATCTaGGACTTTAGTGGTGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: PSTGVNMMLSGTLVVRIHKYDAI*DFSGEN Trigger: ATTCTCACCACTAAAGTCCCAGATAGCATCATATTT...ATGAATTCTCACCACTAAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| 3UTR CAA 72 bp | ATTAAGATTCATTGTACACTGCGTTTCAGAAAGGCTTaGTCAAAGCAGATAATAATGGCCTGTCAGAAATGC | + |
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Preference number: 4 (lower is better) Translates to: IKIHCTLRFRKA*SKQIIMACQKC Trigger: GCATTTCTGACAGGCCATTATTATCTGCTTTGACAAAGCCTTTCTGAAACGCAGTGTACAATGAATCTTAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR TCA 90 bp | AGCAAAGCTCGTTTCATAACATCATTAAGATTCATTGTACACTGCGTTTCAGAATGCTCATGTCCCACATaGATAAAAGGATACAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: SKARFITSLRFIVHCVSECSCPT*IKGYSL Trigger: TAAGCTGTATCCTTTTATTCATGTGGGACATGAGCA...TTCTGAAACGCAGTGTACAATGAATCTTAATGATGTTATGAAACGAGCTTTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| 3UTR CAA 72 bp | TCTGTCTTCACATTTAGGACAGGGCATAACAGTGTCTaGTCCTTTCATGCAAATAAGAGGAAAAATTTATAC | + |
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Preference number: 4 (lower is better) Translates to: SVFTFRTGHNSV*SFHANKRKNLY Trigger: GTATAAATTTTTCCTCTTATTTGCATGAAAGGACAAGACACTGTTATGCCCTGTCCTAAATGTGAAGACAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR GCA 90 bp | TCCTTAGGAACCTTTGATACTCTTTATATTAACCTCAGAAAAGAAAGCTCTCTCTATTTTTCTTTACCGTaGTCATTGATGACGCATATG | + |
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Preference number: 4 (lower is better) Translates to: SLGTFDTLYINLRKESSLYFSLP*SLMTHM Trigger: CATATGCGTCATCAATGAGCACGGTAAAGAAAAATA...GAGAGAGCTTTCTTTTCTGAGGTTAATATAAAGAGTATCAAAGGTTCCTAAGGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR CAA 90 bp | CAGGGCTTGAAGACAGTGAGCCCTAGAATGGTCCAGGTGCTACTGTACACCTCACTCTCCAGAGGGTATTaGGAGATTCTTGCAGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: QGLKTVSPRMVQVLLYTSLSRGY*EILAGE Trigger: CTCCCCTGCAAGAATCTCCAAATACCCTCTGGAGAG...TGAGGTGTACAGTAGCACCTGGACCATTCTAGGGCTCACTGTCTTCAAGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS TCA 90 bp | TTGGAGATTCTTGCAGGGGAGCACAGCTACTCATATACCCTTGACTaGAGGCCAGTCCTCCTCTATCACAGATGGTTGTCCTCTTCAACC | + |
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Preference number: 5 (lower is better) Translates to: LEILAGEHSYSYTLD*RPVLLYHRWLSSST Trigger: GGTTGAAGAGGACAACCATCTGTGATAGAGGAGGACTGGCCTTCAGTCAAGGGTATATGAGTAGCTGTGCTCCCCTGCAAGAATCTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR CAA 90 bp | AGGAAGGCGGAGCTCAGGAGTGTGAAGGTAGATAGCATTGCTGAGTCACAAGGCTCTTTCATAATATCCTaGGCCAGCCGCTCAATTCTG | + |
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Preference number: 5 (lower is better) Translates to: RKAELRSVKVDSIAESQGSFIIS*ASRSIL Trigger: CAGAATTGAGCGGCTGGCCAAGGATATTATGAAAGA...GCCTTGTGACTCAGCAATGCTATCTACCTTCACACTCCTGAGCTCCGCCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR CAA 90 bp | CAGGGCTTGAAGACAGTGAGCCCTAGAATGGTCCAGGTGCTACTGTACACCTCATCTTTCATAATATCCTaGGCCAGCCGCTCAATTCTG | + |
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Preference number: 5 (lower is better) Translates to: QGLKTVSPRMVQVLLYTSSFIIS*ASRSIL Trigger: CAGAATTGAGCGGCTGGCCAAGGATATTATGAAAGA...TGAGGTGTACAGTAGCACCTGGACCATTCTAGGGCTCACTGTCTTCAAGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR CAA 90 bp | CAGGGCTTGAAGACAGTGAGCCCTAGAATGGTCCAGGTGCTACTGTACACCTCAAATTCTGCTCTGATCTaGGTAACTGAAACCGGATGT | + |
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Preference number: 5 (lower is better) Translates to: QGLKTVSPRMVQVLLYTSNSALI*VTETGC Trigger: ACATCCGGTTTCAGTTACCAAGATCAGAGCAGAATT...TGAGGTGTACAGTAGCACCTGGACCATTCTAGGGCTCACTGTCTTCAAGCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS TCA 90 bp | TCCGACAACATCCTCAACAATGAGAACATTCTTTCCAGCCAGCGTTaGAAGATCATCGCCTCCGATTATCTGCATCTCACCCATGGACTG | + |
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Preference number: 5 (lower is better) Translates to: SDNILNNENILSSQR*KIIASDYLHLTHGL Trigger: CAGTCCATGGGTGAGATGCAGATAATCGGAGGCGATGATCTTTCAACGCTGGCTGGAAAGAATGTTCTCATTGTTGAGGATGTTGTCGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS TCA 90 bp | TCTGCTCTGATCTTGGTAACTGAAACCGGATGTGGAAACAGGGAATaGGCACTTGGAGGTAACCTCTCCAGAGGGTATTTGGAGATTCTT | + |
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Preference number: 5 (lower is better) Translates to: SALILVTETGCGNRE*ALGGNLSRGYLEIL Trigger: AAGAATCTCCAAATACCCTCTGGAGAGGTTACCTCCAAGTGCTCATTCCCTGTTTCCACATCCGGTTTCAGTTACCAAGATCAGAGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR CAA 90 bp | AAGCAAGAAGAAATACATCATCCAGCAGACACAGTGTCCAGTTTCTTCATGAAGACAGGGAATGAGCACTaGGAGGTAACCTCTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: KQEEIHHPADTVSSFFMKTGNEH*EVTSPE Trigger: CTCTGGAGAGGTTACCTCCAAGTGCTCATTCCCTGT...CTTCATGAAGAAACTGGACACTGTGTCTGCTGGATGATGTATTTCTTCTTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS-3UTR CAA 90 bp | GACAAACTTGACAGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGTTTCCTGTAGCACCTaGGATTTTGTGATCAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: DKLDSWLPKYRRKYDAIWVSCST*DFVISL Trigger: AAGACTGATCACAAAATCCAAGGTGCTACAGGAAAC...CCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCTGTCAAGTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR CAA 90 bp | TACCGGAAGCTCCAATCAAGAGCCCCGAGCAAAGCTCGTTTCATAACATCATTACCACCACAAATAAGTTaGGAATCTCAAATCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: YRKLQSRAPSKARFITSLPPQIS*ESQIQH Trigger: ATGCTGGATTTGAGATTCCAAACTTATTTGTGGTGG...TAATGATGTTATGAAACGAGCTTTGCTCGGGGCTCTTGATTGGAGCTTCCGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR CAA 90 bp | TGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTAGTGGTGAGGCTACCTTAATCATGTaGGGCTTGTATTTCTCTATA | + |
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Preference number: 5 (lower is better) Translates to: WLPKYRRKYDAIWDFSGEATLIM*GLYFSI Trigger: TATAGAGAAATACAAGCCCAACATGATTAAGGTAGC...CTCACCACTAAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS-3UTR CAA 90 bp | ACAGCTGGCTTCCCAAGTACAGGCGTAAATATGATGCTATCTGGGACTTTAGTGCGTTTCAGAAAGGCTTaGTCAAAGCAGATAATAATG | + |
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Preference number: 5 (lower is better) Translates to: TAGFPSTGVNMMLSGTLVRFRKA*SKQIIM Trigger: CATTATTATCTGCTTTGACAAAGCCTTTCTGAAACG...CACTAAAGTCCCAGATAGCATCATATTTACGCCTGTACTTGGGAAGCCAGCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR CAA 90 bp | AATATGATGCTATCTGGGACTTTAGTGGTGAGAATTCATGTCTTTAGACTCGATTCTTTCATAATATCCTaGGCCAGCCGCTCAATTCTG | + |
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Preference number: 5 (lower is better) Translates to: NMMLSGTLVVRIHVFRLDSFIIS*ASRSIL Trigger: CAGAATTGAGCGGCTGGCCAAGGATATTATGAAAGA...ATCGAGTCTAAAGACATGAATTCTCACCACTAAAGTCCCAGATAGCATCATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376378.5 |
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| CDS-3UTR CAA 90 bp | AAAGCTCGTTTCATAACATCATTAAGATTCATTGTACACTGCGTTTCAGAAAGGGGGCATAACAGTGTCTaGTCCTTTCATGCAAATAAG | + |
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Preference number: 5 (lower is better) Translates to: KARFITSLRFIVHCVSERGHNSV*SFHANK Trigger: CTTATTTGCATGAAAGGACAAGACACTGTTATGCCC...CCTTTCTGAAACGCAGTGTACAATGAATCTTAATGATGTTATGAAACGAGCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS-3UTR CAA 90 bp | TCCTTAGGAACCTTTGATACTCTTTATATTAACCTCAGAAAAGAAAGCTCTCTCGCTACCTTAATCATGTaGGGCTTGTATTTCTCTATA | + |
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Preference number: 5 (lower is better) Translates to: SLGTFDTLYINLRKESSLATLIM*GLYFSI Trigger: TATAGAGAAATACAAGCCCAACATGATTAAGGTAGC...GAGAGAGCTTTCTTTTCTGAGGTTAATATAAAGAGTATCAAAGGTTCCTAAGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS GCA 72 bp | TCACGACGCCTCGCCCGTAGTCTGGCGCCTCCTCGCTaGTCCCGGCCATGTTTCTCCCGGGGAACGCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SRRLARSLAPPR*SRPCFSRGTRE Trigger: TTCCCGCGTTCCCCGGGAGAAACATGGCCGGGAGCAGCGAGGAGGCGCCAGACTACGGGCGAGGCGTCGTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320152.11 |
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| CDS CCA 72 bp | CCAATCATCCATAATCACGACGCCTCGCCCGTAGTCTaGCGCCTCCTCGCTGCTCCCGGCCATGTTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: PIIHNHDASPVV*RLLAAPGHVSP Trigger: GGGAGAAACATGGCCGGGAGCAGCGAGGAGGCGCCAGACTACGGGCGAGGCGTCGTGATTATGGATGATTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000320152.11 ENST00000376376.3 ENST00000376378.5 |
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| CDS TCA 72 bp | GATTCTTGCAGGGGAGCACAGCTACTCATATACCCTTaGCTGAAGGCCAGTCCTCCTCTATCACAGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: DSCRGAQLLIYP*LKASPPLSQMV Trigger: AACCATCTGTGATAGAGGAGGACTGGCCTTCAGTCAAGGGTATATGAGTAGCTGTGCTCCCCTGCAAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS CAA 72 bp | AGATTCTTGCAGGGGAGCACAGCTACTCATATACCCTaGACTGAAGGCCAGTCCTCCTCTATCACAGATGGT | + |
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Preference number: 6 (lower is better) Translates to: RFLQGSTATHIP*TEGQSSSITDG Trigger: ACCATCTGTGATAGAGGAGGACTGGCCTTCAGTCAAGGGTATATGAGTAGCTGTGCTCCCCTGCAAGAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS TCA 72 bp | ATCTTGGTAACTGAAACCGGATGTGGAAACAGGGAATaGGCACTTGGAGGTAACCTCTCCAGAGGGTATTTG | + |
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Preference number: 6 (lower is better) Translates to: ILVTETGCGNRE*ALGGNLSRGYL Trigger: CAAATACCCTCTGGAGAGGTTACCTCCAAGTGCTCATTCCCTGTTTCCACATCCGGTTTCAGTTACCAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376376.3 |
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| CDS TCA 72 bp | ATCCTCAACAATGAGAACATTCTTTCCAGCCAGCGTTaGAAGATCATCGCCTCCGATTATCTGCATCTCACC | + |
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Preference number: 6 (lower is better) Translates to: ILNNENILSSQR*KIIASDYLHLT Trigger: GGTGAGATGCAGATAATCGGAGGCGATGATCTTTCAACGCTGGCTGGAAAGAATGTTCTCATTGTTGAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS CAA 90 bp | AACAAACTGGCTACCTTAATCATGTTGGGCTTGTATTTCTCTATATaGCTGAGTAGTGCTTTCATGGTCCTCCCAGTTCCGACAACATCC | + |
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Preference number: 6 (lower is better) Translates to: NKLATLIMLGLYFSI*LSSAFMVLPVPTTS Trigger: GGATGTTGTCGGAACTGGGAGGACCATGAAAGCACTACTCAGCAATATAGAGAAATACAAGCCCAACATGATTAAGGTAGCCAGTTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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| CDS TCA 72 bp | CATACTCCAAGTCTCCATAATAGTGCTGTGGGTACGTaGATAAATTCAAGTCATACCCTGGCCAATCATCCA | + |
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Preference number: 6 (lower is better) Translates to: HTPSLHNSAVGT*INSSHTLANHP Trigger: TGGATGATTGGCCAGGGTATGACTTGAATTTATTCACGTACCCACAGCACTATTATGGAGACTTGGAGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000320152.11 ENST00000376376.3 ENST00000376378.5 |
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| CDS CAA 90 bp | GATGTTCTCTTCACCAACAAACTGGCTACCTTAATCATGTTGGGCTaGTATTTCTCTATATTGCTGAGTAGTGCTTTCATGGTCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: DVLFTNKLATLIMLG*YFSILLSSAFMVLP Trigger: TGGGAGGACCATGAAAGCACTACTCAGCAATATAGAGAAATACAAGCCCAACATGATTAAGGTAGCCAGTTTGTTGGTGAAGAGAACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320152.11 ENST00000376378.5 |
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