RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRSS51 (Homo sapiens)

Ensembl gene IDs: ENSG00000253649

Ensembl transcript IDs: ENST00000521149.2, ENST00000523024.1, ENST00000636217.1, ENST00000637190.1, ENST00000647010.1, ENST00000647727.1

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCCACATATGTaGAGAGGGCAGATGTTGCCACTTCCTCCAATCCACCTCATTATA +
Preference number: 1 (lower is better)
Translates to: DFGDWQWASLSDPHM*RGQMLPLPPIHLII
Trigger: TATAATGAGGTGGATTGGAGGAAGTGGCAACATCTGCCCTCTCCACATATGTGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR CCA 90 bp TTTATCCTTTCTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTaGGCCTCACTCAGTGACCCACATATGTGGAGAGGGCAGATGTTG +
Preference number: 1 (lower is better)
Translates to: FILSHWLDDDFGDWQ*ASLSDPHMWRGQML
Trigger: CAACATCTGCCCTCTCCACATATGTGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAGAAAGGATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR CCA 90 bp GGAATTTTTATCCTTTCTCACTGGCTGGATGATGACTTTGGCGACTaGCAGTGGGCCTCACTCAGTGACCCACATATGTGGAGAGGGCAG +
Preference number: 1 (lower is better)
Translates to: GIFILSHWLDDDFGD*QWASLSDPHMWRGQ
Trigger: CTGCCCTCTCCACATATGTGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAGAAAGGATAAAAATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR TCA 90 bp ATCCTAACTCTACCGGAGACTTTCTTTCATGGATGGCCCAGGAGATaGAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTGTGCGTCC +
Preference number: 1 (lower is better)
Translates to: ILTLPETFFHGWPRR*KNLHLRWGFPVCAS
Trigger: GGACGCACACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAAAGAAAGTCTCCGGTAGAGTTAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR GCA 90 bp AATTTGCACCTCAGATGGGGGTTCCCTGTGTGTGCGTCCGTATCATaGACTGAACTGACGGAATTAGAGTGGGGCAATGATGATGAGGTA +
Preference number: 1 (lower is better)
Translates to: NLHLRWGFPVCASVS*TELTELEWGNDDEV
Trigger: TACCTCATCATCATTGCCCCACTCTAATTCCGTCAGTTCAGTGCATGATACGGACGCACACACAGGGAACCCCCATCTGAGGTGCAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR CCA 90 bp AAAAGATGTGCTGCTTTCTCATCTGGAATTTTTATCCTTTCTCACTaGCTGGATGATGACTTTGGCGACTGGCAGTGGGCCTCACTCAGT +
Preference number: 1 (lower is better)
Translates to: KRCAAFSSGIFILSH*LDDDFGDWQWASLS
Trigger: ACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAGAAAGGATAAAAATTCCAGATGAGAAAGCAGCACATCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR CCA 90 bp CCTGTGTGTGCGTCCGTATCATGCACTGAACTGACGGAATTAGAGTaGGGCAATGATGATGAGGTAATATTGCCTTCCATGACAGAAATA +
Preference number: 1 (lower is better)
Translates to: PVCASVSCTELTELE*GNDDEVILPSMTEI
Trigger: TATTTCTGTCATGGAAGGCAATATTACCTCATCATCATTGCCCCACTCTAATTCCGTCAGTTCAGTGCATGATACGGACGCACACACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR TCA 90 bp AAGAAACGTAAGTCATTTCCCAACGTTGAGTTTCCAATGCTTTCCTaGAACCGTCCTTCTTTGTTGGAGGTTATTGTTTTCCTCCGGGAG +
Preference number: 1 (lower is better)
Translates to: KKRKSFPNVEFPMLS*NRPSLLEVIVFLRE
Trigger: CTCCCGGAGGAAAACAATAACCTCCAACAAAGAAGGACGGTTTCAGGAAAGCATTGGAAACTCAACGTTGGGAAATGACTTACGTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR GCA 90 bp CTGAGATCAAGAAACGTAAGTCATTTCCCAACGTTGAGTTTCCAATaGTTTCCTGAAACCGTCCTTCTTTGTTGGAGGTTATTGTTTTCC +
Preference number: 1 (lower is better)
Translates to: LRSRNVSHFPTLSFQ*FPETVLLCWRLLFS
Trigger: GGAAAACAATAACCTCCAACAAAGAAGGACGGTTTCAGGAAAGCATTGGAAACTCAACGTTGGGAAATGACTTACGTTTCTTGATCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR GCA 90 bp ATTCTTATCACTTATATTTCAGTCTGGCCACACAAGCTATTTTGTTaGCACTCAGTGAAAAGATGTGCTGCTTTCTCATCTGGAATTTTT +
Preference number: 1 (lower is better)
Translates to: ILITYISVWPHKLFC*HSVKRCAAFSSGIF
Trigger: AAAAATTCCAGATGAGAAAGCAGCACATCTTTTCACTGAGTGGCAACAAAATAGCTTGTGTGGCCAGACTGAAATATAAGTGATAAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp CTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCGGAGGCCCCATGCACTaGTCGTGCCTCTTTTTAGCA +
Preference number: 2 (lower is better)
Translates to: LTGWMMTLATGSGPHSVTGGPMH*SCLFLA
Trigger: TGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCC...GGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp ACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCCACATATGTGGAGAGGGCGGATGGCCCAGGAGATaGAAGAATTTGCACCTCAGA +
Preference number: 2 (lower is better)
Translates to: TLATGSGPHSVTHICGEGGWPRR*KNLHLR
Trigger: TCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCC...GCCCTCTCCACATATGTGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp AAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTCCGGGAGGCCCCATaGACTGCTCGTGCCTCTTTT +
Preference number: 2 (lower is better)
Translates to: KDLPENYHQSLTVLHGTNLREAP*TARASF
Trigger: AAAAGAGGCACGAGCAGTGCATGGGGCCTCCCGGAG...ATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp GACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTTAGGAACACACACCAGTaGGCTTCTCGGCTTCTCGTG +
Preference number: 2 (lower is better)
Translates to: DLPENYHQSLTVLHGTNLRNTHQ*ASRLLV
Trigger: CACGAGAAGCCGAGAAGCTCACTGGTGTGTGTTCCT...AAGATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp ATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTAGCAAGAAGGGGTACTaGGGAACACACACCAGTGAG +
Preference number: 2 (lower is better)
Translates to: MDGPGDERICTSDGGSLCSKKGY*GTHTSE
Trigger: CTCACTGGTGTGTGTTCCTCAGTACCCCTTCTTGCT...ACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp GCCTCACTCAGTGACCCACATATGTGGAGAGGGCAGATGTTGCCACTTCCTCCAGGAGATGAAAGAATTTaGACCTCAGATGGGGGTTCC +
Preference number: 2 (lower is better)
Translates to: ASLSDPHMWRGQMLPLPPGDERI*TSDGGS
Trigger: GGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCC...TGGAGGAAGTGGCAACATCTGCCCTCTCCACATATGTGGGTCACTGAGTGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp AAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTAACTTCTGGGGGCTaGTGTAGATGCTACCCCACA +
Preference number: 2 (lower is better)
Translates to: KDLPENYHQSLTVLHGTNLTSGG*CRCYPT
Trigger: TGTGGGGTAGCATCTACACCAGCCCCCAGAAGTTAG...ATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp TTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGCTAACTTCTGGGGGCTaGTGTAGATGCTACCCCACA +
Preference number: 2 (lower is better)
Translates to: FMDGPGDERICTSDGGSLLTSGG*CRCYPT
Trigger: TGTGGGGTAGCATCTACACCAGCCCCCAGAAGTTAG...CAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp CTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTCTTTCATGGATGGAGGAACACACACCAGTaGGCTTCTCGGCTTCTCGTG +
Preference number: 2 (lower is better)
Translates to: LDKRPLILTLPETFFHGWRNTHQ*ASRLLV
Trigger: CACGAGAAGCCGAGAAGCTCACTGGTGTGTGTTCCT...CCATCCATGAAAGAAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp GAGGAACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTTGGCGACTGGCAGTaGGCCTCACTCAGTGACCCA +
Preference number: 2 (lower is better)
Translates to: EELEHPWIFVSKKGPGTNFGDWQ*ASLSDP
Trigger: TGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAA...ATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp GACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTTCACATGCTCCACAGATaGTTGTGGGAGAATGGAAAG +
Preference number: 2 (lower is better)
Translates to: DLPENYHQSLTVLHGTNLHMLHR*LWENGK
Trigger: CTTTCCATTCTCCCACAAGCATCTGTGGAGCATGTG...AAGATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp TCTTTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCCCATGCACTGCTCGTaGCTCTTTTTAGCACTGTGT +
Preference number: 2 (lower is better)
Translates to: SFMDGPGDERICTSDGGSPMHCS*LFLALC
Trigger: ACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGG...GGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTACTCCGGGAGGCCCCATaGACTGCTCGTGCCTCTTTT +
Preference number: 2 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLLREAP*TARASF
Trigger: AAAAGAGGCACGAGCAGTGCATGGGGCCTCCCGGAG...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp GGAGAAGTGAGTCCATGTCTAACTTCTGGGGGCTGGTGTAGATGCTACCCCACACTCCTCCTGGCTTCATaGAATAAATTGAGCCACAGA +
Preference number: 2 (lower is better)
Translates to: GEVSPCLTSGGWCRCYPTLLLAS*NKLSHR
Trigger: TCTGTGGCTCAATTTATTCCATGAAGCCAGGAGGAG...TGTGGGGTAGCATCTACACCAGCCCCCAGAAGTTAGACATGGACTCACTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
3UTR CAA 90 bp AGTTTCCAATGCTTTCCTGAAACCGTCCTTCTTTGTTGGAGGTTATaGTTTTCCTCCGGGAGGCCCCATGCACTGCTCGTGCCTCTTTTT +
Preference number: 2 (lower is better)
Translates to: SFQCFPETVLLCWRL*FSSGRPHALLVPLF
Trigger: AAAAAGAGGCACGAGCAGTGCATGGGGCCTCCCGGAGGAAAACAATAACCTCCAACAAAGAAGGACGGTTTCAGGAAAGCATTGGAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp CTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCCAAGCAAGAAGGGGTACTaGGGAACACACACCAGTGAG +
Preference number: 2 (lower is better)
Translates to: LEHPWIFVSKKGPGTNFPSKKGY*GTHTSE
Trigger: CTCACTGGTGTGTGTTCCTCAGTACCCCTTCTTGCT...TGGGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp AACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCACTACCACCAGTCCCTaGCTGTCCTTCATGGCACCA +
Preference number: 2 (lower is better)
Translates to: NLSIHGFSYPRRVLEPISTTTSP*LSFMAP
Trigger: TGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGT...GGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp GTTCAAGTTCAAACTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTGGAGGCCCCATGCACTaGTCGTGCCTCTTTTTAGCA +
Preference number: 2 (lower is better)
Translates to: VQVQTGQKTPDPNSTGDFGGPMH*SCLFLA
Trigger: TGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCC...AAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAGTTTGAACTTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp GACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTTCTGACGGAATTAGAGTaGGGCAATGATGATGAGGTA +
Preference number: 2 (lower is better)
Translates to: DLPENYHQSLTVLHGTNLLTELE*GNDDEV
Trigger: TACCTCATCATCATTGCCCCACTCTAATTCCGTCAG...AAGATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp AACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCGATGACTTTGGCGACTaGCAGTGGGCCTCACTCAGT +
Preference number: 2 (lower is better)
Translates to: NLSIHGFSYPRRVLEPISDDFGD*QWASLS
Trigger: ACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATC...GGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp TTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTTTCCAATGCTTTCCTaGAACCGTCCTTCTTTGTTG +
Preference number: 2 (lower is better)
Translates to: FMDGPGDERICTSDGGSLFPMLS*NRPSLL
Trigger: CAACAAAGAAGGACGGTTTCAGGAAAGCATTGGAAA...CAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTAGGAGAGGGCAGATGTTaGCACTTCCTCCAATCCACC +
Preference number: 2 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLGEGRC*HFLQST
Trigger: GGTGGATTGGAGGAAGTGGCAACATCTGCCCTCTCC...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp ATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTACCGTCCTTCTTTGTTaGAGGTTATTGTTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: MDGPGDERICTSDGGSLCTVLLC*RLLFSS
Trigger: GGAGGAAAACAATAACCTCCAACAAAGAAGGACGGT...ACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp AAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATAGCGTCACAGAATGTTaGTGTGATGAAAGACCTTAC +
Preference number: 2 (lower is better)
Translates to: KDLPENYHQSLTVLHGTNSVTEC*CDERPY
Trigger: GTAAGGTCTTTCATCACACCAACATTCTGTGACGCT...ATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp GAGGAACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATAGTGACCCACATATGTaGAGAGGGCAGATGTTGCCA +
Preference number: 2 (lower is better)
Translates to: EELEHPWIFVSKKGPGTNSDPHM*RGQMLP
Trigger: TGGCAACATCTGCCCTCTCCACATATGTGGGTCACT...ATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp CTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCCAAGTGACCCACATATGTaGAGAGGGCAGATGTTGCCA +
Preference number: 2 (lower is better)
Translates to: LEHPWIFVSKKGPGTNFPSDPHM*RGQMLP
Trigger: TGGCAACATCTGCCCTCTCCACATATGTGGGTCACT...TGGGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTAGATGACTTTGGCGACTaGCAGTGGGCCTCACTCAGT +
Preference number: 2 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLDDFGD*QWASLS
Trigger: ACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATC...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp GTCACAGAATGTTGGTGTGATGAAAGACCTTACAGTTCATCTAATGGAATCTGCGTGGCCAGCAGCATTTaGGACCCCAATCCTAGCAAG +
Preference number: 2 (lower is better)
Translates to: VTECWCDERPYSSSNGICVASSI*DPNPSK
Trigger: CTTGCTAGGATTGGGGTCTCAAATGCTGCTGGCCAC...GCAGATTCCATTAGATGAACTGTAAGGTCTTTCATCACACCAACATTCTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp TCTTTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCTTTCCAATGCTTTCCTaGAACCGTCCTTCTTTGTTG +
Preference number: 2 (lower is better)
Translates to: SFMDGPGDERICTSDGGSFPMLS*NRPSLL
Trigger: CAACAAAGAAGGACGGTTTCAGGAAAGCATTGGAAA...GGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp CTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCCACACATGCTCCACAGATaGTTGTGGGAGAATGGAAAG +
Preference number: 2 (lower is better)
Translates to: LEHPWIFVSKKGPGTNFPHMLHR*LWENGK
Trigger: CTTTCCATTCTCCCACAAGCATCTGTGGAGCATGTG...TGGGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp GAGGAACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATCACATGCTCCACAGATaGTTGTGGGAGAATGGAAAG +
Preference number: 2 (lower is better)
Translates to: EELEHPWIFVSKKGPGTNHMLHR*LWENGK
Trigger: CTTTCCATTCTCCCACAAGCATCTGTGGAGCATGTG...ATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp AGAAAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCCACAAGCTATTTTGTTaGCACTCAGTGAAAAGATGT +
Preference number: 2 (lower is better)
Translates to: RKDLPENYHQSLTVLHGTHKLFC*HSVKRC
Trigger: ACATCTTTTCACTGAGTGGCAACAAAATAGCTTGTG...GGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp GAGGAACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTCCTTTCTCACTGGCTaGATGATGACTTTGGCGACT +
Preference number: 2 (lower is better)
Translates to: EELEHPWIFVSKKGPGTNSFLTG*MMTLAT
Trigger: AGTCGCCAAAGTCATCATCCAGCCAGTGAGAAAGGA...ATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp AACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCGTCCGTATCATGCACTaGACTGACGGAATTAGAGTG +
Preference number: 2 (lower is better)
Translates to: NLSIHGFSYPRRVLEPISVRIMH*TDGIRV
Trigger: CACTCTAATTCCGTCAGTTCAGTGCATGATACGGAC...GGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp CTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTCTTTCATGGATGGACGTTGAGTTTCCAATaGTTTCCTGAAACCGTCCTT +
Preference number: 2 (lower is better)
Translates to: LDKRPLILTLPETFFHGWTLSFQ*FPETVL
Trigger: AAGGACGGTTTCAGGAAAGCATTGGAAACTCAACGT...CCATCCATGAAAGAAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp GAGGAACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTGTGCGTCCGTATCATaGACTGAACTGACGGAATTA +
Preference number: 2 (lower is better)
Translates to: EELEHPWIFVSKKGPGTNCASVS*TELTEL
Trigger: TAATTCCGTCAGTTCAGTGCATGATACGGACGCACA...ATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp CTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCCACTCCTCCTGGCTTCATaGAATAAATTGAGCCACAGA +
Preference number: 2 (lower is better)
Translates to: LEHPWIFVSKKGPGTNFPLLLAS*NKLSHR
Trigger: TCTGTGGCTCAATTTATTCCATGAAGCCAGGAGGAG...TGGGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
3UTR-3UTR CCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTAAGTGACCCACATATGTaGAGAGGGCAGATGTTGCCA +
Preference number: 2 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLSDPHM*RGQMLP
Trigger: TGGCAACATCTGCCCTCTCCACATATGTGGGTCACT...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp TATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCATTTGGCGACTGGCAGTaGGCCTCACTCAGTGACCCA +
Preference number: 2 (lower is better)
Translates to: YEKRHKFGCDIYIRCHEPFGDWQ*ASLSDP
Trigger: TGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAA...TGGTTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTAGTCCGTATCATGCACTaGACTGACGGAATTAGAGTG +
Preference number: 2 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLVRIMH*TDGIRV
Trigger: CACTCTAATTCCGTCAGTTCAGTGCATGATACGGAC...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTACTTCTCGGCTTCTCGTaGATCCTGAGATTATGGTGT +
Preference number: 2 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLLLGFS*ILRLWC
Trigger: ACACCATAATCTCAGGATCCACGAGAAGCCGAGAAG...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp CTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCCAACCGTCCTTCTTTGTTaGAGGTTATTGTTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: LEHPWIFVSKKGPGTNFPTVLLC*RLLFSS
Trigger: GGAGGAAAACAATAACCTCCAACAAAGAAGGACGGT...TGGGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp GACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTTACTTATATTTCAGTCTaGCCACACAAGCTATTTTGT +
Preference number: 2 (lower is better)
Translates to: DLPENYHQSLTVLHGTNLTYISV*PHKLFC
Trigger: ACAAAATAGCTTGTGTGGCCAGACTGAAATATAAGT...AAGATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp CCCTATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCCATGCACTGCTCGTaGCTCTTTTTAGCACTGTGT +
Preference number: 2 (lower is better)
Translates to: PYEKRHKFGCDIYIRCHEPMHCS*LFLALC
Trigger: ACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGG...TTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp GTTCAAGTTCAAACTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTACGTTGAGTTTCCAATaGTTTCCTGAAACCGTCCTT +
Preference number: 2 (lower is better)
Translates to: VQVQTGQKTPDPNSTGDFTLSFQ*FPETVL
Trigger: AAGGACGGTTTCAGGAAAGCATTGGAAACTCAACGT...AAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAGTTTGAACTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTATCCTTCATTAGACTGTaGGATTTGGGAGAAGTGAGT +
Preference number: 2 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLSFIRL*DLGEVS
Trigger: ACTCACTTCTCCCAAATCTCACAGTCTAATGAAGGA...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTATTTCCAATGCTTTCCTaGAACCGTCCTTCTTTGTTG +
Preference number: 2 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLFPMLS*NRPSLL
Trigger: CAACAAAGAAGGACGGTTTCAGGAAAGCATTGGAAA...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp CTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCCACACAAGCTATTTTGTTaGCACTCAGTGAAAAGATGT +
Preference number: 2 (lower is better)
Translates to: LEHPWIFVSKKGPGTNFPHKLFC*HSVKRC
Trigger: ACATCTTTTCACTGAGTGGCAACAAAATAGCTTGTG...TGGGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CCA 90 bp CTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCCACCTGACTGTCCTTCATaGCACCAATCTTTAAATAAA +
Preference number: 2 (lower is better)
Translates to: LEHPWIFVSKKGPGTNFPPDCPS*HQSLNK
Trigger: TTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGG...TGGGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp TATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCAGTCCGTATCATGCACTaGACTGACGGAATTAGAGTG +
Preference number: 2 (lower is better)
Translates to: YEKRHKFGCDIYIRCHEPVRIMH*TDGIRV
Trigger: CACTCTAATTCCGTCAGTTCAGTGCATGATACGGAC...TGGTTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp CTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCCAAGTGAAAAGATGTGCTaGTTTCTCATCTGGAATTTT +
Preference number: 2 (lower is better)
Translates to: LEHPWIFVSKKGPGTNFPSEKMC*FLIWNF
Trigger: AAAATTCCAGATGAGAAAGCAGCACATCTTTTCACT...TGGGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR TCA 90 bp CCCTATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAATCCTTCATTAGACTGTaGGATTTGGGAGAAGTGAGT +
Preference number: 2 (lower is better)
Translates to: PYEKRHKFGCDIYIRCHESFIRL*DLGEVS
Trigger: ACTCACTTCTCCCAAATCTCACAGTCTAATGAAGGA...TTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp GTTCAAGTTCAAACTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTTCATCTAATGGAATCTaGTTTTTCATGGACAAGGAA +
Preference number: 2 (lower is better)
Translates to: VQVQTGQKTPDPNSTGDFSSNGI*FFMDKE
Trigger: TTCCTTGTCCATGAAAAAGCAGATTCCATTAGATGA...AAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAGTTTGAACTTGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR GCA 90 bp TATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCAACGTTGAGTTTCCAATaGTTTCCTGAAACCGTCCTT +
Preference number: 2 (lower is better)
Translates to: YEKRHKFGCDIYIRCHEPTLSFQ*FPETVL
Trigger: AAGGACGGTTTCAGGAAAGCATTGGAAACTCAACGT...TGGTTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR CCA 72 bp GACTGGCAGTGGGCCTCACTCAGTGACCCACATATGTaGAGAGGGCAGATGTTGCCACTTCCTCCAATCCAC +
Preference number: 3 (lower is better)
Translates to: DWQWASLSDPHM*RGQMLPLPPIH
Trigger: GTGGATTGGAGGAAGTGGCAACATCTGCCCTCTCCACATATGTGGGTCACTGAGTGAGGCCCACTGCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR CCA 72 bp TCTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTaGGCCTCACTCAGTGACCCACATATGTGGAGAGGG +
Preference number: 3 (lower is better)
Translates to: SHWLDDDFGDWQ*ASLSDPHMWRG
Trigger: CCCTCTCCACATATGTGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CAA 90 bp ACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCCACATATGTGGAGAGGGCATGCTCCACAGATGCTaGTGGGAGAATGGAAAGGAA +
Preference number: 3 (lower is better)
Translates to: TLATGSGPHSVTHICGEGMLHRC*WENGKE
Trigger: TTCCTTTCCATTCTCCCACAAGCATCTGTGGAGCAT...GCCCTCTCCACATATGTGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR CCA 72 bp TTGGGAGAAGTGAGTCCATGTCTAACTTCTGGGGGCTaGTGTAGATGCTACCCCACAGCACATGCTCCACAG +
Preference number: 3 (lower is better)
Translates to: LGEVSPCLTSGG*CRCYPTAHAPQ
Trigger: CTGTGGAGCATGTGCTGTGGGGTAGCATCTACACCAGCCCCCAGAAGTTAGACATGGACTCACTTCTCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CAA 90 bp GACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTTCTTTGTTGGAGGTTATaGTTTTCCTCCGGGAGGCCC +
Preference number: 3 (lower is better)
Translates to: DLPENYHQSLTVLHGTNLLCWRL*FSSGRP
Trigger: GGGCCTCCCGGAGGAAAACAATAACCTCCAACAAAG...AAGATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CAA 90 bp AAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTGTTGGAGGTTATaGTTTTCCTCCGGGAGGCCC +
Preference number: 3 (lower is better)
Translates to: KDLPENYHQSLTVLHGTNLCWRL*FSSGRP
Trigger: GGGCCTCCCGGAGGAAAACAATAACCTCCAACAAAG...ATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CAA 90 bp CTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCAGTCATTTCCCAACGTaGAGTTTCCAATGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: LTGWMMTLATGSGPHSVTSHFPT*SFQCFP
Trigger: AGGAAAGCATTGGAAACTCAACGTTGGGAAATGACT...GGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR TCA 72 bp CTACCGGAGACTTTCTTTCATGGATGGCCCAGGAGATaGAAGAATTTGCACCTCAGATGGGGGTTCCCTGTG +
Preference number: 3 (lower is better)
Translates to: LPETFFHGWPRR*KNLHLRWGFPV
Trigger: CACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAAAGAAAGTCTCCGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR CCA 72 bp GCTGCTTTCTCATCTGGAATTTTTATCCTTTCTCACTaGCTGGATGATGACTTTGGCGACTGGCAGTGGGCC +
Preference number: 3 (lower is better)
Translates to: AAFSSGIFILSH*LDDDFGDWQWA
Trigger: GGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAGAAAGGATAAAAATTCCAGATGAGAAAGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CAA 90 bp GAGGAACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATCTTTGTTGGAGGTTATaGTTTTCCTCCGGGAGGCCC +
Preference number: 3 (lower is better)
Translates to: EELEHPWIFVSKKGPGTNLCWRL*FSSGRP
Trigger: GGGCCTCCCGGAGGAAAACAATAACCTCCAACAAAG...ATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CAA 90 bp AGAAAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAGTCATTTCCCAACGTaGAGTTTCCAATGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: RKDLPENYHQSLTVLHGTSHFPT*SFQCFP
Trigger: AGGAAAGCATTGGAAACTCAACGTTGGGAAATGACT...GGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CAA 90 bp CCGGGAGGCCCCATGCACTGCTCGTGCCTCTTTTTAGCACTGTGTTTAACATTCGCTTCATGGAATAAATaGAGCCACAGACACAAACAT +
Preference number: 3 (lower is better)
Translates to: PGGPMHCSCLFLALCLTFASWNK*SHRHKH
Trigger: ATGTTTGTGTCTGTGGCTCAATTTATTCCATGAAGC...GAATGTTAAACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
3UTR-3UTR CAA 90 bp AAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATAACCGTCCTTCTTTGTaGGAGGTTATTGTTTTCCTC +
Preference number: 3 (lower is better)
Translates to: KDLPENYHQSLTVLHGTNNRPSL*EVIVFL
Trigger: GAGGAAAACAATAACCTCCAACAAAGAAGGACGGTT...ATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CAA 90 bp GAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTGTGCGTCCGTATCAACCGTCCTTCTTTGTaGGAGGTTATTGTTTTCCTC +
Preference number: 3 (lower is better)
Translates to: EMKEFAPQMGVPCVCVRINRPSL*EVIVFL
Trigger: GAGGAAAACAATAACCTCCAACAAAGAAGGACGGTT...GATACGGACGCACACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR CCA 72 bp GCGTCCGTATCATGCACTGAACTGACGGAATTAGAGTaGGGCAATGATGATGAGGTAATATTGCCTTCCATG +
Preference number: 3 (lower is better)
Translates to: ASVSCTELTELE*GNDDEVILPSM
Trigger: CATGGAAGGCAATATTACCTCATCATCATTGCCCCACTCTAATTCCGTCAGTTCAGTGCATGATACGGACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR GCA 72 bp CACTCAGTGACCCACATATGTGGAGAGGGCAGATGTTaGCACTTCCTCCAATCCACCTCATTATACTTTTTA +
Preference number: 3 (lower is better)
Translates to: HSVTHICGEGRC*HFLQSTSLYFL
Trigger: TAAAAAGTATAATGAGGTGGATTGGAGGAAGTGGCAACATCTGCCCTCTCCACATATGTGGGTCACTGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CAA 90 bp TATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCATGGAGAGGGCAGATGTaGCCACTTCCTCCAATCCAC +
Preference number: 3 (lower is better)
Translates to: YEKRHKFGCDIYIRCHEPWRGQM*PLPPIH
Trigger: GTGGATTGGAGGAAGTGGCAACATCTGCCCTCTCCA...TGGTTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CAA 90 bp CTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTCTTTCATGGATGGGATGATGAGGTAATATaGCCTTCCATGACAGAAATA +
Preference number: 3 (lower is better)
Translates to: LDKRPLILTLPETFFHGWDDEVI*PSMTEI
Trigger: TATTTCTGTCATGGAAGGCAATATTACCTCATCATC...CCATCCATGAAAGAAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR CCA 72 bp CCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATaGCACCAATCTTTAAATAAACATGGTCTCTTAGTT +
Preference number: 3 (lower is better)
Translates to: PRKLPPVPDCPS*HQSLNKHGLLV
Trigger: AACTAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CAA 90 bp CCCTATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAAATGCTCCACAGATGCTaGTGGGAGAATGGAAAGGAA +
Preference number: 3 (lower is better)
Translates to: PYEKRHKFGCDIYIRCHEMLHRC*WENGKE
Trigger: TTCCTTTCCATTCTCCCACAAGCATCTGTGGAGCAT...TTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CAA 90 bp GAGGAACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATGATGATGAGGTAATATaGCCTTCCATGACAGAAATA +
Preference number: 3 (lower is better)
Translates to: EELEHPWIFVSKKGPGTNDDEVI*PSMTEI
Trigger: TATTTCTGTCATGGAAGGCAATATTACCTCATCATC...ATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CAA 90 bp TATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCAATGCTCCACAGATGCTaGTGGGAGAATGGAAAGGAA +
Preference number: 3 (lower is better)
Translates to: YEKRHKFGCDIYIRCHEPMLHRC*WENGKE
Trigger: TTCCTTTCCATTCTCCCACAAGCATCTGTGGAGCAT...TGGTTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR-3UTR CAA 90 bp GTCACAGAATGTTGGTGTGATGAAAGACCTTACAGTTCATCTAATGGAATCTGCGCTTCATGGAATAAATaGAGCCACAGACACAAACAT +
Preference number: 3 (lower is better)
Translates to: VTECWCDERPYSSSNGICASWNK*SHRHKH
Trigger: ATGTTTGTGTCTGTGGCTCAATTTATTCCATGAAGC...GCAGATTCCATTAGATGAACTGTAAGGTCTTTCATCACACCAACATTCTGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
3UTR TCA 72 bp AAGTCATTTCCCAACGTTGAGTTTCCAATGCTTTCCTaGAACCGTCCTTCTTTGTTGGAGGTTATTGTTTTC +
Preference number: 3 (lower is better)
Translates to: KSFPNVEFPMLS*NRPSLLEVIVF
Trigger: GAAAACAATAACCTCCAACAAAGAAGGACGGTTTCAGGAAAGCATTGGAAACTCAACGTTGGGAAATGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR CCA 72 bp ACAAATACTGTTTTATATGAGGAACTTGAGCATCCATaGATTTTCGTATCCAAGAAGGGTCCTGGAACCAAT +
Preference number: 3 (lower is better)
Translates to: TNTVLYEELEHP*IFVSKKGPGTN
Trigger: ATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTTCCTCATATAAAACAGTATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp GGAGAAGTGAGTCCATGTCTAACTTCTGGGGGCTGGTGTAGATGCTACCCCACACTGCCTTCCTCTTTCTaGCACCGCGGCTGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GEVSPCLTSGGWCRCYPTLPSSF*HRGCLA
Trigger: GGCGAGGCAGCCGCGGTGTCAGAAAGAGGAAGGCAG...TGTGGGGTAGCATCTACACCAGCCCCCAGAAGTTAGACATGGACTCACTTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637190.1
CDS-3UTR TCA 90 bp CTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCGTGGGCCTCACTCAGTaGCCCACATATGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LTGWMMTLATGSGPHSVTVGLTQ*PTYVER
Trigger: CCTCTCCACATATGTGGGTCACTGAGTGAGGCCCAC...GGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp TTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGGCCCCACTGTCTCCCTaGAGGGAGGAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FMDGPGDERICTSDGGSLAPLSP*REEEAG
Trigger: CCCAGCCTCCTCCTCCCTCCAGGGAGACAGTGGGGC...CAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
CDS-3UTR CCA 90 bp ACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCCACATATGTGGAGAGGGCTTTGGCGACTGGCAGTaGGCCTCACTCAGTGACCCA +
Preference number: 4 (lower is better)
Translates to: TLATGSGPHSVTHICGEGFGDWQ*ASLSDP
Trigger: TGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAA...GCCCTCTCCACATATGTGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp GCCTCACTCAGTGACCCACATATGTGGAGAGGGCAGATGTTGCCACTTCCTCCAAGCACAAACCAGAGGTaGCCCACTGTCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ASLSDPHMWRGQMLPLPPSTNQR*PTVSLE
Trigger: CTCCAGGGAGACAGTGGGGCACCTCTGGTTTGTGCT...TGGAGGAAGTGGCAACATCTGCCCTCTCCACATATGTGGGTCACTGAGTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
CDS-3UTR GCA 90 bp AGAAAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCCTCCGGGAGGCCCCATaGACTGCTCGTGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RKDLPENYHQSLTVLHGTLREAP*TARASF
Trigger: AAAAGAGGCACGAGCAGTGCATGGGGCCTCCCGGAG...GGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp ACATGGTGGCCAGCAGCATTTGAGACCCCAATCCTAGCAAGAAGGGGTACTGAGCTCCGGGAGGCCCCATaGACTGCTCGTGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: TWWPAAFETPILARRGTELREAP*TARASF
Trigger: AAAAGAGGCACGAGCAGTGCATGGGGCCTCCCGGAG...CTCAGTACCCCTTCTTGCTAGGATTGGGGTCTCAAATGCTGCTGGCCACCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GCCTCACTCAGTGACCCACATATGTGGAGAGGGCAGATGTTGCCACTTCCTCCATTTGGCGACTGGCAGTaGGCCTCACTCAGTGACCCA +
Preference number: 4 (lower is better)
Translates to: ASLSDPHMWRGQMLPLPPFGDWQ*ASLSDP
Trigger: TGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAA...TGGAGGAAGTGGCAACATCTGCCCTCTCCACATATGTGGGTCACTGAGTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp GCCTCACTCAGTGACCCACATATGTGGAGAGGGCAGATGTTGCCACTTCCTCCAGGTCGTTACCCACTGTaGCATCCAACACCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ASLSDPHMWRGQMLPLPPGRYPL*HPTPVP
Trigger: TGGGACTGGTGTTGGATGGCACAGTGGGTAACGACC...TGGAGGAAGTGGCAACATCTGCCCTCTCCACATATGTGGGTCACTGAGTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCTTTTCTGGATTGTCCTaGGCATGTCCCTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LTGWMMTLATGSGPHSVTFSGLS*ACPLSA
Trigger: GGCACTCAAGGGACATGCCCAGGACAATCCAGAAAA...GGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CCGGGAGGCCCCATGCACTGCTCGTGCCTCTTTTTAGCACTGTGTTTAACATTCTACCAGGTCTCCCCCTaGAGCCAGATCTTATGCCCC +
Preference number: 4 (lower is better)
Translates to: PGGPMHCSCLFLALCLTFYQVSP*SQILCP
Trigger: GGGGCATAAGATCTGGCTCCAGGGGGAGACCTGGTA...GAATGTTAAACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp AGAAAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCACTACCACCAGTCCCTaGCTGTCCTTCATGGCACCA +
Preference number: 4 (lower is better)
Translates to: RKDLPENYHQSLTVLHGTTTTSP*LSFMAP
Trigger: TGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGT...GGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp ACATGGTGGCCAGCAGCATTTGAGACCCCAATCCTAGCAAGAAGGGGTACTGAGACTACCACCAGTCCCTaGCTGTCCTTCATGGCACCA +
Preference number: 4 (lower is better)
Translates to: TWWPAAFETPILARRGTETTTSP*LSFMAP
Trigger: TGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGT...CTCAGTACCCCTTCTTGCTAGGATTGGGGTCTCAAATGCTGCTGGCCACCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp GAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTGTGCGTCCGTATCAGCACAAACCAGAGGTaGCCCACTGTCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EMKEFAPQMGVPCVCVRISTNQR*PTVSLE
Trigger: CTCCAGGGAGACAGTGGGGCACCTCTGGTTTGTGCT...GATACGGACGCACACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
CDS-3UTR GCA 90 bp CCGGGAGGCCCCATGCACTGCTCGTGCCTCTTTTTAGCACTGTGTTTAACATTCGGAGGCCCCATGCACTaGTCGTGCCTCTTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: PGGPMHCSCLFLALCLTFGGPMH*SCLFLA
Trigger: TGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCC...GAATGTTAAACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GTTCAAGTTCAAACTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTGCCCCACTGTCTCCCTaGAGGGAGGAGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VQVQTGQKTPDPNSTGDFAPLSP*REEEAG
Trigger: CCCAGCCTCCTCCTCCCTCCAGGGAGACAGTGGGGC...AAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAGTTTGAACTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
CDS-3UTR CCA 90 bp CACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTACCAGGTCTCCCCCTaGAGCCAGATCTTATGCCCC +
Preference number: 4 (lower is better)
Translates to: HTSELLGFSWILRLWCRLYQVSP*SQILCP
Trigger: GGGGCATAAGATCTGGCTCCAGGGGGAGACCTGGTA...AAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp TTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTTTGGCGACTGGCAGTaGGCCTCACTCAGTGACCCA +
Preference number: 4 (lower is better)
Translates to: FMDGPGDERICTSDGGSLFGDWQ*ASLSDP
Trigger: TGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAA...CAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp GGGAGGCCCCATGCACTGCTCGTGCCTCTTTTTAGCACTGTGTTTAACATTCCTAGGAACACACACCAGTaGGCTTCTCGGCTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: GRPHALLVPLFSTVFNIPRNTHQ*ASRLLV
Trigger: CACGAGAAGCCGAGAAGCTCACTGGTGTGTGTTCCT...AGGAATGTTAAACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp CTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTCCCCTCCTTTTCTGAGGAACACACACCAGTaGGCTTCTCGGCTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: LGFSWILRLWCRLSPPFLRNTHQ*ASRLLV
Trigger: CACGAGAAGCCGAGAAGCTCACTGGTGTGTGTTCCT...CAGAAAAGGAGGGGAAAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp AAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATGTGGCCAGCAGCATTTaGGACCCCAATCCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: KDLPENYHQSLTVLHGTNVASSI*DPNPSK
Trigger: CTTGCTAGGATTGGGGTCTCAAATGCTGCTGGCCAC...ATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp AGAAAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCTGCGAGGGGACCCTATaGGAAGAGGCACAAATTTGG +
Preference number: 4 (lower is better)
Translates to: RKDLPENYHQSLTVLHGTCEGTL*EEAQIW
Trigger: CCAAATTTGTGCCTCTTCTCATAGGGTCCCCTCGCA...GGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp GGAACACACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTTCTTCGGAAGCAGTGTaGGGCTGTCAGAACCCACCA +
Preference number: 4 (lower is better)
Translates to: GTHTSELLGFSWILRLWCSSEAV*GCQNPP
Trigger: TGGTGGGTTCTGACAGCCGCACACTGCTTCCGAAGA...ACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTGTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR GCA 90 bp ATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTTCTTCGGAAGCAGTGTaGGGCTGTCAGAACCCACCA +
Preference number: 4 (lower is better)
Translates to: MDGPGDERICTSDGGSLCSSEAV*GCQNPP
Trigger: TGGTGGGTTCTGACAGCCGCACACTGCTTCCGAAGA...ACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR GCA 90 bp GGGAGGCCCCATGCACTGCTCGTGCCTCTTTTTAGCACTGTGTTTAACATTCCTGGTCGTTACCCACTGTaGCATCCAACACCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GRPHALLVPLFSTVFNIPGRYPL*HPTPVP
Trigger: TGGGACTGGTGTTGGATGGCACAGTGGGTAACGACC...AGGAATGTTAAACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp ACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCCACATATGTGGAGAGGGCTGTGCGTCCGTATCATaGACTGAACTGACGGAATTA +
Preference number: 4 (lower is better)
Translates to: TLATGSGPHSVTHICGEGCASVS*TELTEL
Trigger: TAATTCCGTCAGTTCAGTGCATGATACGGACGCACA...GCCCTCTCCACATATGTGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp TTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGGGAGAGGGCAGATGTTaGCACTTCCTCCAATCCACC +
Preference number: 4 (lower is better)
Translates to: FMDGPGDERICTSDGGSLGEGRC*HFLQST
Trigger: GGTGGATTGGAGGAAGTGGCAACATCTGCCCTCTCC...CAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp TTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGGATGACTTTGGCGACTaGCAGTGGGCCTCACTCAGT +
Preference number: 4 (lower is better)
Translates to: FMDGPGDERICTSDGGSLDDFGD*QWASLS
Trigger: ACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATC...CAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTGTGCGTCCGTATCGATGACTTTGGCGACTaGCAGTGGGCCTCACTCAGT +
Preference number: 4 (lower is better)
Translates to: EMKEFAPQMGVPCVCVRIDDFGD*QWASLS
Trigger: ACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATC...GATACGGACGCACACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR CAA 72 bp TGCTTTCCTGAAACCGTCCTTCTTTGTTGGAGGTTATaGTTTTCCTCCGGGAGGCCCCATGCACTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: CFPETVLLCWRL*FSSGRPHALLV
Trigger: CACGAGCAGTGCATGGGGCCTCCCGGAGGAAAACAATAACCTCCAACAAAGAAGGACGGTTTCAGGAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp AGAAAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCATCTTATGCCCCCACTaGAGACACCCACTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RKDLPENYHQSLTVLHGTILCPH*RHPLGR
Trigger: TCTTCCAAGTGGGTGTCTTCAGTGGGGGCATAAGAT...GGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp CTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTCCCCTCCTTTTCTGAGCAAGAAGGGGTACTaGGGAACACACACCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LGFSWILRLWCRLSPPFLSKKGY*GTHTSE
Trigger: CTCACTGGTGTGTGTTCCTCAGTACCCCTTCTTGCT...CAGAAAAGGAGGGGAAAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp AAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATTGCGAGGGGACCCTATaGGAAGAGGCACAAATTTGG +
Preference number: 4 (lower is better)
Translates to: KDLPENYHQSLTVLHGTNCEGTL*EEAQIW
Trigger: CCAAATTTGTGCCTCTTCTCATAGGGTCCCCTCGCA...ATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp GGAGAAGTGAGTCCATGTCTAACTTCTGGGGGCTGGTGTAGATGCTACCCCACACCCATGCACTGCTCGTaGCTCTTTTTAGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: GEVSPCLTSGGWCRCYPTPMHCS*LFLALC
Trigger: ACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGG...TGTGGGGTAGCATCTACACCAGCCCCCAGAAGTTAGACATGGACTCACTTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp TCTTTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCGGAGAGGGCAGATGTTaGCACTTCCTCCAATCCACC +
Preference number: 4 (lower is better)
Translates to: SFMDGPGDERICTSDGGSGEGRC*HFLQST
Trigger: GGTGGATTGGAGGAAGTGGCAACATCTGCCCTCTCC...GGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp AAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATAGCACAAACCAGAGGTaGCCCACTGTCTCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: KDLPENYHQSLTVLHGTNSTNQR*PTVSLE
Trigger: TTCAAGGGAGACAGTGGGGCACCTCTGGTTTGTGCT...ATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647010.1
CDS-3UTR CCA 90 bp GCCTCACTCAGTGACCCACATATGTGGAGAGGGCAGATGTTGCCACTTCCTCCAATTGGTCATACCCATTaGTCGTTACCCACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: ASLSDPHMWRGQMLPLPPIGHTH*SLPTVP
Trigger: TGGCACAGTGGGTAACGACCAATGGGTATGACCAAT...TGGAGGAAGTGGCAACATCTGCCCTCTCCACATATGTGGGTCACTGAGTGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTCCCCTCCTTTTCTGCTAACTTCTGGGGGCTaGTGTAGATGCTACCCCACA +
Preference number: 4 (lower is better)
Translates to: LGFSWILRLWCRLSPPFLLTSGG*CRCYPT
Trigger: TGTGGGGTAGCATCTACACCAGCCCCCAGAAGTTAG...CAGAAAAGGAGGGGAAAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp ACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCCACATATGTGGAGAGGGCAGCGTCACAGAATGTTaGTGTGATGAAAGACCTTAC +
Preference number: 4 (lower is better)
Translates to: TLATGSGPHSVTHICGEGSVTEC*CDERPY
Trigger: GTAAGGTCTTTCATCACACCAACATTCTGTGACGCT...GCCCTCTCCACATATGTGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GGAACACACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAATTTGCACCTCAGATaGGGGTTCCCTGTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: GTHTSELLGFSWILRLWCNLHLR*GFPVCA
Trigger: CGCACACACAGGGAACCCCCATCTGAGGTGCAAATT...ACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTCCCCTCCTTTTCTGAATTTGCACCTCAGATaGGGGTTCCCTGTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: LGFSWILRLWCRLSPPFLNLHLR*GFPVCA
Trigger: CGCACACACAGGGAACCCCCATCTGAGGTGCAAATT...CAGAAAAGGAGGGGAAAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp TGTGCGTCCGTATCATGCACTGAACTGACGGAATTAGAGTGGGGCAATGATGATGTGGCCAGCAGCATTTaGGACCCCAATCCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: CASVSCTELTELEWGNDDVASSI*DPNPSK
Trigger: CTTGCTAGGATTGGGGTCTCAAATGCTGCTGGCCAC...ATCATCATTGCCCCACTCTAATTCCGTCAGTTCAGTGCATGATACGGACGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp CACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTGGATGGCCCAGGAGATaGAAGAATTTGCACCTCAGA +
Preference number: 4 (lower is better)
Translates to: HTSELLGFSWILRLWCRLGWPRR*KNLHLR
Trigger: TCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCC...AAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp TGTGCGTCCGTATCATGCACTGAACTGACGGAATTAGAGTGGGGCAATGATGATCCCCACTGTCTCCCTTaGAGATACCATTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: CASVSCTELTELEWGNDDPHCLP*RYHWCL
Trigger: CAGGCACCAATGGTATCTTCAAGGGAGACAGTGGGG...ATCATCATTGCCCCACTCTAATTCCGTCAGTTCAGTGCATGATACGGACGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647010.1
CDS-3UTR GCA 90 bp CTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTCCCCTCCTTTTCTGATCTGGATACTCACTTaGCACGGGCACTCACCATTC +
Preference number: 4 (lower is better)
Translates to: LGFSWILRLWCRLSPPFLIWILT*HGHSPF
Trigger: GAATGGTGAGTGCCCGTGGCAAGTGAGTATCCAGAT...CAGAAAAGGAGGGGAAAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR GCA 90 bp AAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATATCTGGATACTCACTTaGCACGGGCACTCACCATTC +
Preference number: 4 (lower is better)
Translates to: KDLPENYHQSLTVLHGTNIWILT*HGHSPF
Trigger: GAATGGTGAGTGCCCGTGGCAAGTGAGTATCCAGAT...ATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR GCA 90 bp AGAAAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCTCTTTCCGGCTAATCTaGACCACTCTCAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RKDLPENYHQSLTVLHGTSFRLI*TTLSFS
Trigger: GGAAAAGCTGAGAGTGGTGCAGATTAGCCGGAAAGA...GGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp AGAAAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCCACATGCTCCACAGATaGTTGTGGGAGAATGGAAAG +
Preference number: 4 (lower is better)
Translates to: RKDLPENYHQSLTVLHGTHMLHR*LWENGK
Trigger: CTTTCCATTCTCCCACAAGCATCTGTGGAGCATGTG...GGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp TGTGCGTCCGTATCATGCACTGAACTGACGGAATTAGAGTGGGGCAATGATGATGGAGGCCCCATGCACTaGTCGTGCCTCTTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: CASVSCTELTELEWGNDDGGPMH*SCLFLA
Trigger: TGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCC...ATCATCATTGCCCCACTCTAATTCCGTCAGTTCAGTGCATGATACGGACGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTGTGCGTCCGTATCTTTTCTGGATTGTCCTaGGCATGTCCCTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: EMKEFAPQMGVPCVCVRIFSGLS*ACPLSA
Trigger: GGCACTCAAGGGACATGCCCAGGACAATCCAGAAAA...GATACGGACGCACACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CCA 90 bp ACATGGTGGCCAGCAGCATTTGAGACCCCAATCCTAGCAAGAAGGGGTACTGAGGGAAAAGCAGGCCTGTaGCCACATTGTACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TWWPAAFETPILARRGTEGKAGL*PHCTFS
Trigger: AGAAAACGTACAATGTGGCCACAGGCCTGCTTTTCC...CTCAGTACCCCTTCTTGCTAGGATTGGGGTCTCAAATGCTGCTGGCCACCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTGTACGTTTTCTTTTGTaGACTCCAGAGGTGGACCCC +
Preference number: 4 (lower is better)
Translates to: HTSELLGFSWILRLWCRLVRFLL*TPEVDP
Trigger: GGGGTCCACCTCTGGAGTCCACAAAAGAAAACGTAC...AAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637190.1
CDS-3UTR CCA 90 bp GGAGAAGTGAGTCCATGTCTAACTTCTGGGGGCTGGTGTAGATGCTACCCCACAATTGGTCATACCCATTaGTCGTTACCCACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GEVSPCLTSGGWCRCYPTIGHTH*SLPTVP
Trigger: TGGCACAGTGGGTAACGACCAATGGGTATGACCAAT...TGTGGGGTAGCATCTACACCAGCCCCCAGAAGTTAGACATGGACTCACTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCCATACCAGGTCTCCCCCTaGAGCCAGATCTTATGCCCC +
Preference number: 4 (lower is better)
Translates to: LEHPWIFVSKKGPGTNFPYQVSP*SQILCP
Trigger: GGGGCATAAGATCTGGCTCCAGGGGGAGACCTGGTA...TGGGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GGAGAAGTGAGTCCATGTCTAACTTCTGGGGGCTGGTGTAGATGCTACCCCACACTTCTCGGCTTCTCGTaGATCCTGAGATTATGGTGT +
Preference number: 4 (lower is better)
Translates to: GEVSPCLTSGGWCRCYPTLLGFS*ILRLWC
Trigger: ACACCATAATCTCAGGATCCACGAGAAGCCGAGAAG...TGTGGGGTAGCATCTACACCAGCCCCCAGAAGTTAGACATGGACTCACTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp AGAAAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCTCCTTTCTCACTGGCTaGATGATGACTTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: RKDLPENYHQSLTVLHGTSFLTG*MMTLAT
Trigger: AGTCGCCAAAGTCATCATCCAGCCAGTGAGAAAGGA...GGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CCGGGAGGCCCCATGCACTGCTCGTGCCTCTTTTTAGCACTGTGTTTAACATTCTCCTTTCTCACTGGCTaGATGATGACTTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: PGGPMHCSCLFLALCLTFSFLTG*MMTLAT
Trigger: AGTCGCCAAAGTCATCATCCAGCCAGTGAGAAAGGA...GAATGTTAAACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp AAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATACAGAGGTGTTTCCGTaGCATCTGGATACTCACTTG +
Preference number: 4 (lower is better)
Translates to: KDLPENYHQSLTVLHGTNTEVFP*HLDTHL
Trigger: CAAGTGAGTATCCAGATGTCACGGAAACACCTCTGT...ATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR TCA 90 bp CTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTCCCCTCCTTTTCTGACAGAGGTGTTTCCGTaGCATCTGGATACTCACTTG +
Preference number: 4 (lower is better)
Translates to: LGFSWILRLWCRLSPPFLTEVFP*HLDTHL
Trigger: CAAGTGAGTATCCAGATGTCACGGAAACACCTCTGT...CAGAAAAGGAGGGGAAAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR TCA 90 bp GCCTCACTCAGTGACCCACATATGTGGAGAGGGCAGATGTTGCCACTTCCTCCATTTCCAATGCTTTCCTaGAACCGTCCTTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: ASLSDPHMWRGQMLPLPPFPMLS*NRPSLL
Trigger: CAACAAAGAAGGACGGTTTCAGGAAAGCATTGGAAA...TGGAGGAAGTGGCAACATCTGCCCTCTCCACATATGTGGGTCACTGAGTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp CTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTCCCCTCCTTTTCTGGTCCGTATCATGCACTaGACTGACGGAATTAGAGTG +
Preference number: 4 (lower is better)
Translates to: LGFSWILRLWCRLSPPFLVRIMH*TDGIRV
Trigger: CACTCTAATTCCGTCAGTTCAGTGCATGATACGGAC...CAGAAAAGGAGGGGAAAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp GTTCAAGTTCAAACTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTGTGGGCCTCACTCAGTaGCCCACATATGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VQVQTGQKTPDPNSTGDFVGLTQ*PTYVER
Trigger: CCTCTCCACATATGTGGGTCACTGAGTGAGGCCCAC...AAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAGTTTGAACTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp CTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTCTTTCATGGATGGTGCGAGGGGACCCTATaGGAAGAGGCACAAATTTGG +
Preference number: 4 (lower is better)
Translates to: LDKRPLILTLPETFFHGWCEGTL*EEAQIW
Trigger: CCAAATTTGTGCCTCTTCTCATAGGGTCCCCTCGCA...CCATCCATGAAAGAAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp TGTCTCCTCCTGGCTTCATGGAATAAATTGAGCCACAGACACAAACATACCAGGGGTCGTTACCCACTGTaGCATCCAACACCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: CLLLASWNKLSHRHKHTRGRYPL*HPTPVP
Trigger: TGGGACTGGTGTTGGATGGCACAGTGGGTAACGACC...CCTGGTATGTTTGTGTCTGTGGCTCAATTTATTCCATGAAGCCAGGAGGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
CDS-3UTR GCA 90 bp GGGAGGCCCCATGCACTGCTCGTGCCTCTTTTTAGCACTGTGTTTAACATTCCTTCTTTCCGGCTAATCTaGACCACTCTCAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GRPHALLVPLFSTVFNIPSFRLI*TTLSFS
Trigger: GGAAAAGCTGAGAGTGGTGCAGATTAGCCGGAAAGA...AGGAATGTTAAACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp CACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTCACATGCTCCACAGATaGTTGTGGGAGAATGGAAAG +
Preference number: 4 (lower is better)
Translates to: HTSELLGFSWILRLWCRLHMLHR*LWENGK
Trigger: CTTTCCATTCTCCCACAAGCATCTGTGGAGCATGTG...AAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp GACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTTGGAGATGAAAGAATTTaGACCTCAGATGGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: DLPENYHQSLTVLHGTNLGDERI*TSDGGS
Trigger: GGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCC...AAGATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTTGGAAAAGCAGGCCTGTaGCCACATTGTACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: DLPENYHQSLTVLHGTNLGKAGL*PHCTFS
Trigger: AGAAAACGTACAATGTGGCCACAGGCCTGCTTTTCC...AAGATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp TTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGGGAAAAGCAGGCCTGTaGCCACATTGTACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FMDGPGDERICTSDGGSLGKAGL*PHCTFS
Trigger: AGAAAACGTACAATGTGGCCACAGGCCTGCTTTTCC...CAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp ATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTGATCTTTCTGAACCCTaGAATGTGCGAGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: MDGPGDERICTSDGGSLCDLSEP*NVRDSR
Trigger: CCTGGAATCTCGCACATTCCAGGGTTCAGAAAGATC...ACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637190.1
CDS-3UTR CCA 90 bp TCTTTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCTGTTTCCGTGACATCTaGATACTCACTTGCCACGGG +
Preference number: 4 (lower is better)
Translates to: SFMDGPGDERICTSDGGSCFRDI*ILTCHG
Trigger: CCCGTGGCAAGTGAGTATCCAGATGTCACGGAAACA...GGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CCA 90 bp ACATGGTGGCCAGCAGCATTTGAGACCCCAATCCTAGCAAGAAGGGGTACTGAGTGCTTTCTCTCCGAGTaGATGTTGCTGAATGTTCTC +
Preference number: 4 (lower is better)
Translates to: TWWPAAFETPILARRGTECFLSE*MLLNVL
Trigger: GAGAACATTCAGCAACATCCACTCGGAGAGAAAGCA...CTCAGTACCCCTTCTTGCTAGGATTGGGGTCTCAAATGCTGCTGGCCACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp TCTTTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGAAGACACCCACTTaGAAGAGTCTCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SFMDGPGDERICTSDGGSLKTPT*KSLWVP
Trigger: TGGAACCCAGAGACTCTTCCAAGTGGGTGTCTTCAG...GGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CCGGGAGGCCCCATGCACTGCTCGTGCCTCTTTTTAGCACTGTGTTTAACATTCCTCCTCCTGGCTTCATaGAATAAATTGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: PGGPMHCSCLFLALCLTFLLLAS*NKLSHR
Trigger: TCTGTGGCTCAATTTATTCCATGAAGCCAGGAGGAG...GAATGTTAAACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp AACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCAGGAACACACACCAGTaGGCTTCTCGGCTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: NLSIHGFSYPRRVLEPISRNTHQ*ASRLLV
Trigger: CACGAGAAGCCGAGAAGCTCACTGGTGTGTGTTCCT...GGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp TGTCTCCTCCTGGCTTCATGGAATAAATTGAGCCACAGACACAAACATACCAGGAGCAAGAAGGGGTACTaGGGAACACACACCAGTGAG +
Preference number: 4 (lower is better)
Translates to: CLLLASWNKLSHRHKHTRSKKGY*GTHTSE
Trigger: CTCACTGGTGTGTGTTCCTCAGTACCCCTTCTTGCT...CCTGGTATGTTTGTGTCTGTGGCTCAATTTATTCCATGAAGCCAGGAGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
CDS-3UTR TCA 90 bp ACATGGTGGCCAGCAGCATTTGAGACCCCAATCCTAGCAAGAAGGGGTACTGAGTCCTTCATTAGACTGTaGGATTTGGGAGAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: TWWPAAFETPILARRGTESFIRL*DLGEVS
Trigger: ACTCACTTCTCCCAAATCTCACAGTCTAATGAAGGA...CTCAGTACCCCTTCTTGCTAGGATTGGGGTCTCAAATGCTGCTGGCCACCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTAGTGGGCCTCACTCAGTaGCCCACATATGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLVGLTQ*PTYVER
Trigger: CCTCTCCACATATGTGGGTCACTGAGTGAGGCCCAC...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp GTTCAAGTTCAAACTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTACTACCACCAGTCCCTaGCTGTCCTTCATGGCACCA +
Preference number: 4 (lower is better)
Translates to: VQVQTGQKTPDPNSTGDFTTTSP*LSFMAP
Trigger: TGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGT...AAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAGTTTGAACTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp AACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCGGAGGCCCCATGCACTaGTCGTGCCTCTTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: NLSIHGFSYPRRVLEPISGGPMH*SCLFLA
Trigger: TGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCC...GGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp TCTTTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCGGAGATGAAAGAATTTaGACCTCAGATGGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SFMDGPGDERICTSDGGSGDERI*TSDGGS
Trigger: GGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCC...GGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp AAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATACATTGTACGTTTTCTaGATTGTCCTGGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: KDLPENYHQSLTVLHGTNTLYVF*IVLGMS
Trigger: GGACATGCCCAGGACAATCCAGAAAACGTACAATGT...ATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CCA 90 bp TGTGCGTCCGTATCATGCACTGAACTGACGGAATTAGAGTGGGGCAATGATGATTGTTTCCGTGACATCTaGATACTCACTTGCCACGGG +
Preference number: 4 (lower is better)
Translates to: CASVSCTELTELEWGNDDCFRDI*ILTCHG
Trigger: CCCGTGGCAAGTGAGTATCCAGATGTCACGGAAACA...ATCATCATTGCCCCACTCTAATTCCGTCAGTTCAGTGCATGATACGGACGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTCCCCTCCTTTTCTGCTCCTCCTGGCTTCATaGAATAAATTGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: LGFSWILRLWCRLSPPFLLLLAS*NKLSHR
Trigger: TCTGTGGCTCAATTTATTCCATGAAGCCAGGAGGAG...CAGAAAAGGAGGGGAAAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GGAGAAGTGAGTCCATGTCTAACTTCTGGGGGCTGGTGTAGATGCTACCCCACAACCGTCCTTCTTTGTTaGAGGTTATTGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GEVSPCLTSGGWCRCYPTTVLLC*RLLFSS
Trigger: GGAGGAAAACAATAACCTCCAACAAAGAAGGACGGT...TGTGGGGTAGCATCTACACCAGCCCCCAGAAGTTAGACATGGACTCACTTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GGAACACACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTCTGACGGAATTAGAGTaGGGCAATGATGATGAGGTA +
Preference number: 4 (lower is better)
Translates to: GTHTSELLGFSWILRLWCLTELE*GNDDEV
Trigger: TACCTCATCATCATTGCCCCACTCTAATTCCGTCAG...ACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTGTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp ATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTCTGACGGAATTAGAGTaGGGCAATGATGATGAGGTA +
Preference number: 4 (lower is better)
Translates to: MDGPGDERICTSDGGSLCLTELE*GNDDEV
Trigger: TACCTCATCATCATTGCCCCACTCTAATTCCGTCAG...ACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCCAAATTTGCACCTCAGATaGGGGTTCCCTGTGTGTGCG +
Preference number: 4 (lower is better)
Translates to: LEHPWIFVSKKGPGTNFPNLHLR*GFPVCA
Trigger: CGCACACACAGGGAACCCCCATCTGAGGTGCAAATT...TGGGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTCTTTCATGGATGGAGTGACCCACATATGTaGAGAGGGCAGATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LDKRPLILTLPETFFHGWSDPHM*RGQMLP
Trigger: TGGCAACATCTGCCCTCTCCACATATGTGGGTCACT...CCATCCATGAAAGAAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GGGAGGCCCCATGCACTGCTCGTGCCTCTTTTTAGCACTGTGTTTAACATTCCTATCCAAGAAGGGTCCTaGAACCAATTTCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: GRPHALLVPLFSTVFNIPIQEGS*NQFPTD
Trigger: ATCTGTGGGAAATTGGTTCCAGGACCCTTCTTGGAT...AGGAATGTTAAACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp GACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTCCTTCATTAGACTGTaGGATTTGGGAGAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: DLPENYHQSLTVLHGTNLSFIRL*DLGEVS
Trigger: ACTCACTTCTCCCAAATCTCACAGTCTAATGAAGGA...AAGATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp CACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTTTCCAATGCTTTCCTaGAACCGTCCTTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: HTSELLGFSWILRLWCRLFPMLS*NRPSLL
Trigger: CAACAAAGAAGGACGGTTTCAGGAAAGCATTGGAAA...AAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp GACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTTTCCAATGCTTTCCTaGAACCGTCCTTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: DLPENYHQSLTVLHGTNLFPMLS*NRPSLL
Trigger: CAACAAAGAAGGACGGTTTCAGGAAAGCATTGGAAA...AAGATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp CTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTCTTTCATGGATGGGTCCGTATCATGCACTaGACTGACGGAATTAGAGTG +
Preference number: 4 (lower is better)
Translates to: LDKRPLILTLPETFFHGWVRIMH*TDGIRV
Trigger: CACTCTAATTCCGTCAGTTCAGTGCATGATACGGAC...CCATCCATGAAAGAAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp TGTGCGTCCGTATCATGCACTGAACTGACGGAATTAGAGTGGGGCAATGATGATCACATGCTCCACAGATaGTTGTGGGAGAATGGAAAG +
Preference number: 4 (lower is better)
Translates to: CASVSCTELTELEWGNDDHMLHR*LWENGK
Trigger: CTTTCCATTCTCCCACAAGCATCTGTGGAGCATGTG...ATCATCATTGCCCCACTCTAATTCCGTCAGTTCAGTGCATGATACGGACGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp TGTCTCCTCCTGGCTTCATGGAATAAATTGAGCCACAGACACAAACATACCAGGCCCATGCACTGCTCGTaGCTCTTTTTAGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: CLLLASWNKLSHRHKHTRPMHCS*LFLALC
Trigger: ACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGG...CCTGGTATGTTTGTGTCTGTGGCTCAATTTATTCCATGAAGCCAGGAGGAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
CDS-3UTR GCA 90 bp TTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGACGTTGAGTTTCCAATaGTTTCCTGAAACCGTCCTT +
Preference number: 4 (lower is better)
Translates to: FMDGPGDERICTSDGGSLTLSFQ*FPETVL
Trigger: AAGGACGGTTTCAGGAAAGCATTGGAAACTCAACGT...CAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp GAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTGTGCGTCCGTATCACGTTGAGTTTCCAATaGTTTCCTGAAACCGTCCTT +
Preference number: 4 (lower is better)
Translates to: EMKEFAPQMGVPCVCVRITLSFQ*FPETVL
Trigger: AAGGACGGTTTCAGGAAAGCATTGGAAACTCAACGT...GATACGGACGCACACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp TCTTTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCTGTGCGTCCGTATCATaGACTGAACTGACGGAATTA +
Preference number: 4 (lower is better)
Translates to: SFMDGPGDERICTSDGGSCASVS*TELTEL
Trigger: TAATTCCGTCAGTTCAGTGCATGATACGGACGCACA...GGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp TGTGCGTCCGTATCATGCACTGAACTGACGGAATTAGAGTGGGGCAATGATGATGGAGATGAAAGAATTTaGACCTCAGATGGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: CASVSCTELTELEWGNDDGDERI*TSDGGS
Trigger: GGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCC...ATCATCATTGCCCCACTCTAATTCCGTCAGTTCAGTGCATGATACGGACGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp GGAGAAGTGAGTCCATGTCTAACTTCTGGGGGCTGGTGTAGATGCTACCCCACACTCAGTGAAAAGATGTaGTGCTTTCTCATCTGGAAT +
Preference number: 4 (lower is better)
Translates to: GEVSPCLTSGGWCRCYPTLSEKM*CFLIWN
Trigger: ATTCCAGATGAGAAAGCAGCACATCTTTTCACTGAG...TGTGGGGTAGCATCTACACCAGCCCCCAGAAGTTAGACATGGACTCACTTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GGAACACACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTACCGTCCTTCTTTGTTaGAGGTTATTGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GTHTSELLGFSWILRLWCTVLLC*RLLFSS
Trigger: GGAGGAAAACAATAACCTCCAACAAAGAAGGACGGT...ACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTGTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTTACCGTCCTTCTTTGTTaGAGGTTATTGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: DLPENYHQSLTVLHGTNLTVLLC*RLLFSS
Trigger: GGAGGAAAACAATAACCTCCAACAAAGAAGGACGGT...AAGATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTGTGCGTCCGTATCAGCGTCACAGAATGTTaGTGTGATGAAAGACCTTAC +
Preference number: 4 (lower is better)
Translates to: EMKEFAPQMGVPCVCVRISVTEC*CDERPY
Trigger: GTAAGGTCTTTCATCACACCAACATTCTGTGACGCT...GATACGGACGCACACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GGAACACACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTTTTATCCTTTCTCACTaGCTGGATGATGACTTTGGC +
Preference number: 4 (lower is better)
Translates to: GTHTSELLGFSWILRLWCFILSH*LDDDFG
Trigger: GCCAAAGTCATCATCCAGCCAGTGAGAAAGGATAAA...ACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTGTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp AGAAAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCCTCAGCTTTTCCAGGTaGATGTTTAAGTCATCATAT +
Preference number: 4 (lower is better)
Translates to: RKDLPENYHQSLTVLHGTLSFSR*MFKSSY
Trigger: ATATGATGACTTAAACATGCACCTGGAAAAGCTGAG...GGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp CTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCCATCTTTCCGGCTAATCTaGACCACTCTCAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LEHPWIFVSKKGPGTNFPSFRLI*TTLSFS
Trigger: GGAAAAGCTGAGAGTGGTGCAGATTAGCCGGAAAGA...TGGGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp ATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTCTCAGTGAAAAGATGTaGTGCTTTCTCATCTGGAAT +
Preference number: 4 (lower is better)
Translates to: MDGPGDERICTSDGGSLCLSEKM*CFLIWN
Trigger: ATTCCAGATGAGAAAGCAGCACATCTTTTCACTGAG...ACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp GGAGAAGTGAGTCCATGTCTAACTTCTGGGGGCTGGTGTAGATGCTACCCCACACACAAGCTATTTTGTTaGCACTCAGTGAAAAGATGT +
Preference number: 4 (lower is better)
Translates to: GEVSPCLTSGGWCRCYPTHKLFC*HSVKRC
Trigger: ACATCTTTTCACTGAGTGGCAACAAAATAGCTTGTG...TGTGGGGTAGCATCTACACCAGCCCCCAGAAGTTAGACATGGACTCACTTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp TGTGCGTCCGTATCATGCACTGAACTGACGGAATTAGAGTGGGGCAATGATGATTGCTTTCTCTCCGAGTaGATGTTGCTGAATGTTCTC +
Preference number: 4 (lower is better)
Translates to: CASVSCTELTELEWGNDDCFLSE*MLLNVL
Trigger: GAGAACATTCAGCAACATCCACTCGGAGAGAAAGCA...ATCATCATTGCCCCACTCTAATTCCGTCAGTTCAGTGCATGATACGGACGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTCTTTCATGGATGGTGCTTTCTCTCCGAGTaGATGTTGCTGAATGTTCTC +
Preference number: 4 (lower is better)
Translates to: LDKRPLILTLPETFFHGWCFLSE*MLLNVL
Trigger: GAGAACATTCAGCAACATCCACTCGGAGAGAAAGCA...CCATCCATGAAAGAAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTACTAACTTCTGGGGGCTaGTGTAGATGCTACCCCACA +
Preference number: 4 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLLTSGG*CRCYPT
Trigger: TGTGGGGTAGCATCTACACCAGCCCCCAGAAGTTAG...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp AACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCAGTGACCCACATATGTaGAGAGGGCAGATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: NLSIHGFSYPRRVLEPISSDPHM*RGQMLP
Trigger: TGGCAACATCTGCCCTCTCCACATATGTGGGTCACT...GGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GCCTCACTCAGTGACCCACATATGTGGAGAGGGCAGATGTTGCCACTTCCTCCAACTTATATTTCAGTCTaGCCACACAAGCTATTTTGT +
Preference number: 4 (lower is better)
Translates to: ASLSDPHMWRGQMLPLPPTYISV*PHKLFC
Trigger: ACAAAATAGCTTGTGTGGCCAGACTGAAATATAAGT...TGGAGGAAGTGGCAACATCTGCCCTCTCCACATATGTGGGTCACTGAGTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CCGGGAGGCCCCATGCACTGCTCGTGCCTCTTTTTAGCACTGTGTTTAACATTCCCTGACTGTCCTTCATaGCACCAATCTTTAAATAAA +
Preference number: 4 (lower is better)
Translates to: PGGPMHCSCLFLALCLTFPDCPS*HQSLNK
Trigger: TTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGG...GAATGTTAAACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp TATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCACTGAACCCTGGAATGTaGGAGATTCCAGGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: YEKRHKFGCDIYIRCHEPLNPGM*EIPGPS
Trigger: CGAGGGCCCTGGAATCTCGCACATTCCAGGGTTCAG...TGGTTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637190.1
CDS-3UTR GCA 90 bp GAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTGTGCGTCCGTATCCTCAGCTTTTCCAGGTaGATGTTTAAGTCATCATAT +
Preference number: 4 (lower is better)
Translates to: EMKEFAPQMGVPCVCVRILSFSR*MFKSSY
Trigger: ATATGATGACTTAAACATGCACCTGGAAAAGCTGAG...GATACGGACGCACACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp CTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTCCCCTCCTTTTCTGCTCAGCTTTTCCAGGTaGATGTTTAAGTCATCATAT +
Preference number: 4 (lower is better)
Translates to: LGFSWILRLWCRLSPPFLLSFSR*MFKSSY
Trigger: ATATGATGACTTAAACATGCACCTGGAAAAGCTGAG...CAGAAAAGGAGGGGAAAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp TTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGCACAAGCTATTTTGTTaGCACTCAGTGAAAAGATGT +
Preference number: 4 (lower is better)
Translates to: FMDGPGDERICTSDGGSLHKLFC*HSVKRC
Trigger: ACATCTTTTCACTGAGTGGCAACAAAATAGCTTGTG...CAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp TTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGAGGGGAATTAGAAGCTaGAACATCTTCTTGTCAATT +
Preference number: 4 (lower is better)
Translates to: FMDGPGDERICTSDGGSLRGIRS*NIFLSI
Trigger: AATTGACAAGAAGATGTTCCAGCTTCTAATTCCCCT...CAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636217.1
CDS-3UTR CCA 90 bp AACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCATTGGTCATACCCATTaGTCGTTACCCACTGTGCCA +
Preference number: 4 (lower is better)
Translates to: NLSIHGFSYPRRVLEPISIGHTH*SLPTVP
Trigger: TGGCACAGTGGGTAACGACCAATGGGTATGACCAAT...GGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTACTGAAGACACCCACTTaGAAGAGTCTCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLLKTPT*KSLWVP
Trigger: TGGAACCCAGAGACTCTTCCAAGTGGGTGTCTTCAG...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CCCTATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAAGATGACTTTGGCGACTaGCAGTGGGCCTCACTCAGT +
Preference number: 4 (lower is better)
Translates to: PYEKRHKFGCDIYIRCHEDDFGD*QWASLS
Trigger: ACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATC...TTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
3UTR CAA 72 bp TCACTCAGTGACCCACATATGTGGAGAGGGCAGATGTaGCCACTTCCTCCAATCCACCTCATTATACTTTTT +
Preference number: 4 (lower is better)
Translates to: SLSDPHMWRGQM*PLPPIHLIILF
Trigger: AAAAAGTATAATGAGGTGGATTGGAGGAAGTGGCAACATCTGCCCTCTCCACATATGTGGGTCACTGAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp GAGGAACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTCCTTCATTAGACTGTaGGATTTGGGAGAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: EELEHPWIFVSKKGPGTNSFIRL*DLGEVS
Trigger: ACTCACTTCTCCCAAATCTCACAGTCTAATGAAGGA...ATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp TGTCTCCTCCTGGCTTCATGGAATAAATTGAGCCACAGACACAAACATACCAGGACGTTGAGTTTCCAATaGTTTCCTGAAACCGTCCTT +
Preference number: 4 (lower is better)
Translates to: CLLLASWNKLSHRHKHTRTLSFQ*FPETVL
Trigger: AAGGACGGTTTCAGGAAAGCATTGGAAACTCAACGT...CCTGGTATGTTTGTGTCTGTGGCTCAATTTATTCCATGAAGCCAGGAGGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
CDS-3UTR GCA 90 bp GACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTCATCTAATGGAATCTaGTTTTTCATGGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: DLPENYHQSLTVLHGTNLSSNGI*FFMDKE
Trigger: TTCCTTGTCCATGAAAAAGCAGATTCCATTAGATGA...AAGATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp TATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCAGGAGAGGGCAGATGTTaGCACTTCCTCCAATCCACC +
Preference number: 4 (lower is better)
Translates to: YEKRHKFGCDIYIRCHEPGEGRC*HFLQST
Trigger: GGTGGATTGGAGGAAGTGGCAACATCTGCCCTCTCC...TGGTTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp ATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTAGTGAAAAGATGTGCTaGTTTCTCATCTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: MDGPGDERICTSDGGSLCSEKMC*FLIWNF
Trigger: AAAATTCCAGATGAGAAAGCAGCACATCTTTTCACT...ACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GTTCAAGTTCAAACTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTACATTGTACGTTTTCTaGATTGTCCTGGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: VQVQTGQKTPDPNSTGDFTLYVF*IVLGMS
Trigger: GGACATGCCCAGGACAATCCAGAAAACGTACAATGT...AAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAGTTTGAACTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GTCACAGAATGTTGGTGTGATGAAAGACCTTACAGTTCATCTAATGGAATCTGCCTGAAGACACCCACTTaGAAGAGTCTCTGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: VTECWCDERPYSSSNGICLKTPT*KSLWVP
Trigger: TGGAACCCAGAGACTCTTCCAAGTGGGTGTCTTCAG...GCAGATTCCATTAGATGAACTGTAAGGTCTTTCATCACACCAACATTCTGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp AACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCCTCCTCCTGGCTTCATaGAATAAATTGAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: NLSIHGFSYPRRVLEPISLLLAS*NKLSHR
Trigger: TCTGTGGCTCAATTTATTCCATGAAGCCAGGAGGAG...GGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp CCCTATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAAATCTTATGCCCCCACTaGAGACACCCACTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PYEKRHKFGCDIYIRCHEILCPH*RHPLGR
Trigger: TCTTCCAAGTGGGTGTCTTCAGTGGGGGCATAAGAT...TTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTATGTGCGTCCGTATCATaGACTGAACTGACGGAATTA +
Preference number: 4 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLCASVS*TELTEL
Trigger: TAATTCCGTCAGTTCAGTGCATGATACGGACGCACA...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GTCACAGAATGTTGGTGTGATGAAAGACCTTACAGTTCATCTAATGGAATCTGCCTTCTCGGCTTCTCGTaGATCCTGAGATTATGGTGT +
Preference number: 4 (lower is better)
Translates to: VTECWCDERPYSSSNGICLLGFS*ILRLWC
Trigger: ACACCATAATCTCAGGATCCACGAGAAGCCGAGAAG...GCAGATTCCATTAGATGAACTGTAAGGTCTTTCATCACACCAACATTCTGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CCCTATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAAAGTGACCCACATATGTaGAGAGGGCAGATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: PYEKRHKFGCDIYIRCHESDPHM*RGQMLP
Trigger: TGGCAACATCTGCCCTCTCCACATATGTGGGTCACT...TTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp GTTCAAGTTCAAACTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTTTTATCCTTTCTCACTaGCTGGATGATGACTTTGGC +
Preference number: 4 (lower is better)
Translates to: VQVQTGQKTPDPNSTGDFFILSH*LDDDFG
Trigger: GCCAAAGTCATCATCCAGCCAGTGAGAAAGGATAAA...AAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAGTTTGAACTTGAAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR TCA 90 bp TATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCAGGATGGCCCAGGAGATaGAAGAATTTGCACCTCAGA +
Preference number: 4 (lower is better)
Translates to: YEKRHKFGCDIYIRCHEPGWPRR*KNLHLR
Trigger: TCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCC...TGGTTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp TATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCACCCATGCACTGCTCGTaGCTCTTTTTAGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: YEKRHKFGCDIYIRCHEPPMHCS*LFLALC
Trigger: ACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGG...TGGTTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp AACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCCTCAGTGAAAAGATGTaGTGCTTTCTCATCTGGAAT +
Preference number: 4 (lower is better)
Translates to: NLSIHGFSYPRRVLEPISLSEKM*CFLIWN
Trigger: ATTCCAGATGAGAAAGCAGCACATCTTTTCACTGAG...GGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTATTTATCCTTTCTCACTaGCTGGATGATGACTTTGGC +
Preference number: 4 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLFILSH*LDDDFG
Trigger: GCCAAAGTCATCATCCAGCCAGTGAGAAAGGATAAA...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp TGTCTCCTCCTGGCTTCATGGAATAAATTGAGCCACAGACACAAACATACCAGGCCTGACTGTCCTTCATaGCACCAATCTTTAAATAAA +
Preference number: 4 (lower is better)
Translates to: CLLLASWNKLSHRHKHTRPDCPS*HQSLNK
Trigger: TTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGG...CCTGGTATGTTTGTGTCTGTGGCTCAATTTATTCCATGAAGCCAGGAGGAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
CDS-3UTR TCA 90 bp AGAAATAAGTTATTAAGCGTCACAGAATGTTGGTGTGATGAAAGACCTTACAGTGGATGGCCCAGGAGATaGAAGAATTTGCACCTCAGA +
Preference number: 4 (lower is better)
Translates to: RNKLLSVTECWCDERPYSGWPRR*KNLHLR
Trigger: TCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCC...ACTGTAAGGTCTTTCATCACACCAACATTCTGTGACGCTTAATAACTTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp GTTCAAGTTCAAACTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTCACAAGCTATTTTGTTaGCACTCAGTGAAAAGATGT +
Preference number: 4 (lower is better)
Translates to: VQVQTGQKTPDPNSTGDFHKLFC*HSVKRC
Trigger: ACATCTTTTCACTGAGTGGCAACAAAATAGCTTGTG...AAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAGTTTGAACTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CCCTATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAAATCCAAGAAGGGTCCTaGAACCAATTTCCCACAGAT +
Preference number: 4 (lower is better)
Translates to: PYEKRHKFGCDIYIRCHEIQEGS*NQFPTD
Trigger: ATCTGTGGGAAATTGGTTCCAGGACCCTTCTTGGAT...TTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp GTTCAAGTTCAAACTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTAGTGAAAAGATGTGCTaGTTTCTCATCTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: VQVQTGQKTPDPNSTGDFSEKMC*FLIWNF
Trigger: AAAATTCCAGATGAGAAAGCAGCACATCTTTTCACT...AAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAGTTTGAACTTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp AGAAATAAGTTATTAAGCGTCACAGAATGTTGGTGTGATGAAAGACCTTACAGTTCCTTTCTCACTGGCTaGATGATGACTTTGGCGACT +
Preference number: 4 (lower is better)
Translates to: RNKLLSVTECWCDERPYSSFLTG*MMTLAT
Trigger: AGTCGCCAAAGTCATCATCCAGCCAGTGAGAAAGGA...ACTGTAAGGTCTTTCATCACACCAACATTCTGTGACGCTTAATAACTTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTATCATCTAATGGAATCTaGTTTTTCATGGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLSSNGI*FFMDKE
Trigger: TTCCTTGTCCATGAAAAAGCAGATTCCATTAGATGA...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTAAGTGAAAAGATGTGCTaGTTTCTCATCTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLSEKMC*FLIWNF
Trigger: AAAATTCCAGATGAGAAAGCAGCACATCTTTTCACT...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTAACTTATATTTCAGTCTaGCCACACAAGCTATTTTGT +
Preference number: 4 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLTYISV*PHKLFC
Trigger: ACAAAATAGCTTGTGTGGCCAGACTGAAATATAAGT...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp CCCTATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCTGACTGTCCTTCATaGCACCAATCTTTAAATAAA +
Preference number: 4 (lower is better)
Translates to: PYEKRHKFGCDIYIRCHEPDCPS*HQSLNK
Trigger: TTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGG...TTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATAGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR GCA 90 bp CCCTATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAATCATCTAATGGAATCTaGTTTTTCATGGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: PYEKRHKFGCDIYIRCHESSNGI*FFMDKE
Trigger: TTCCTTGTCCATGAAAAAGCAGATTCCATTAGATGA...TTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATAGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CCA 90 bp TATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCAACTTATATTTCAGTCTaGCCACACAAGCTATTTTGT +
Preference number: 4 (lower is better)
Translates to: YEKRHKFGCDIYIRCHEPTYISV*PHKLFC
Trigger: ACAAAATAGCTTGTGTGGCCAGACTGAAATATAAGT...TGGTTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS GCA 90 bp AACCCTGGAATGTGCGAGATTCCAGGGCCCTCGGCCTCAGCCTCCTaGCTTCCTCTTTCTGACACCGCGGCTGCCTCGCCACATCCCTGG +
Preference number: 5 (lower is better)
Translates to: NPGMCEIPGPSASAS*LPLSDTAAASPHPW
Trigger: CCAGGGATGTGGCGAGGCAGCCGCGGTGTCAGAAAGAGGAAGGCAGGAGGCTGAGGCCGAGGGCCCTGGAATCTCGCACATTCCAGGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523024.1
CDS-3UTR CAA 90 bp CTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCTCCTGGGCATGTCCCTaGAGTGCCAAAAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: LTGWMMTLATGSGPHSVTSWACP*SAKSRG
Trigger: TCCCCTGCTTTTGGCACTCAAGGGACATGCCCAGGA...GGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCTGGAGAGGGCAGATGTaGCCACTTCCTCCAATCCAC +
Preference number: 5 (lower is better)
Translates to: LTGWMMTLATGSGPHSVTWRGQM*PLPPIH
Trigger: GTGGATTGGAGGAAGTGGCAACATCTGCCCTCTCCA...GGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCCTCTCCGAGTGGATGTaGCTGAATGTTCTCGTTCCC +
Preference number: 5 (lower is better)
Translates to: LTGWMMTLATGSGPHSVTLSEWM*LNVLVP
Trigger: GGGAACGAGAACATTCAGCAACATCCACTCGGAGAG...GGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCCTCCTCCTTCTGCACTaGCTTTCTCTCCGAGTGGAT +
Preference number: 5 (lower is better)
Translates to: LTGWMMTLATGSGPHSVTLLLLH*LSLRVD
Trigger: ATCCACTCGGAGAGAAAGCAAGTGCAGAAGGAGGAG...GGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCGCAGGGGTGAGTACCTaGAAGATACCATTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: LTGWMMTLATGSGPHSVTAGVST*KIPLVP
Trigger: AGGCACCAATGGTATCTTCAAGGTACTCACCCCTGC...GGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
CDS-3UTR CAA 90 bp CTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCACTGAAGACACCCACTaGGAAGAGTCTCTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: LTGWMMTLATGSGPHSVTTEDTH*EESLGS
Trigger: GGAACCCAGAGACTCTTCCAAGTGGGTGTCTTCAGT...GGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCAGGCCTGTGGCCACATaGTACGTTTTCTGGATTGTC +
Preference number: 5 (lower is better)
Translates to: LTGWMMTLATGSGPHSVTRPVAT*YVFWIV
Trigger: GACAATCCAGAAAACGTACAATGTGGCCACAGGCCT...GGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTCCCCTCCTTTTCTGTCCTGGGCATGTCCCTaGAGTGCCAAAAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: LGFSWILRLWCRLSPPFLSWACP*SAKSRG
Trigger: TCCCCTGCTTTTGGCACTCAAGGGACATGCCCAGGA...CAGAAAAGGAGGGGAAAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CAA 90 bp AGAAAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCTGGAGAGGGCAGATGTaGCCACTTCCTCCAATCCAC +
Preference number: 5 (lower is better)
Translates to: RKDLPENYHQSLTVLHGTWRGQM*PLPPIH
Trigger: GTGGATTGGAGGAAGTGGCAACATCTGCCCTCTCCA...GGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp AGAAAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCGCCCCACTGTCTCCCTaGAAGATACCATTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: RKDLPENYHQSLTVLHGTAPLSP*KIPLVP
Trigger: AGGCACCAATGGTATCTTCAAGGGAGACAGTGGGGC...GGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647010.1
CDS-3UTR CAA 90 bp AGAAAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCCTCCTCCTTCTGCACTaGCTTTCTCTCCGAGTGGAT +
Preference number: 5 (lower is better)
Translates to: RKDLPENYHQSLTVLHGTLLLLH*LSLRVD
Trigger: ATCCACTCGGAGAGAAAGCAAGTGCAGAAGGAGGAG...GGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp ACATGGTGGCCAGCAGCATTTGAGACCCCAATCCTAGCAAGAAGGGGTACTGAGCTTTGTTGGAGGTTATaGTTTTCCTCCGGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: TWWPAAFETPILARRGTELCWRL*FSSGRP
Trigger: GGGCCTCCCGGAGGAAAACAATAACCTCCAACAAAG...CTCAGTACCCCTTCTTGCTAGGATTGGGGTCTCAAATGCTGCTGGCCACCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTGGAGAGGGCAGATGTaGCCACTTCCTCCAATCCAC +
Preference number: 5 (lower is better)
Translates to: HTSELLGFSWILRLWCRLWRGQM*PLPPIH
Trigger: GTGGATTGGAGGAAGTGGCAACATCTGCCCTCTCCA...AAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp TTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGCATCTGGATACTCACTaGCCACGGGCACTCACCATT +
Preference number: 5 (lower is better)
Translates to: FMDGPGDERICTSDGGSLHLDTH*PRALTI
Trigger: AATGGTGAGTGCCCGTGGCAAGTGAGTATCCAGATG...CAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CAA 90 bp TTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGCTCTCCGAGTGGATGTaGCTGAATGTTCTCGTTCCC +
Preference number: 5 (lower is better)
Translates to: FMDGPGDERICTSDGGSLLSEWM*LNVLVP
Trigger: GGGAACGAGAACATTCAGCAACATCCACTCGGAGAG...CAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTGCAGGGGTGAGTACCTaGAAGATACCATTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: HTSELLGFSWILRLWCRLAGVST*KIPLVP
Trigger: AGGCACCAATGGTATCTTCAAGGTACTCACCCCTGC...AAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
CDS-3UTR CAA 90 bp GGGAGGCCCCATGCACTGCTCGTGCCTCTTTTTAGCACTGTGTTTAACATTCCTACTGAAGACACCCACTaGGAAGAGTCTCTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: GRPHALLVPLFSTVFNIPTEDTH*EESLGS
Trigger: GGAACCCAGAGACTCTTCCAAGTGGGTGTCTTCAGT...AGGAATGTTAAACACAGTGCTAAAAAGAGGCACGAGCAGTGCATGGGGCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCAACCGTCCTTCTTTGTaGGAGGTTATTGTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: LTGWMMTLATGSGPHSVTNRPSL*EVIVFL
Trigger: GAGGAAAACAATAACCTCCAACAAAGAAGGACGGTT...GGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp AAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATTGTACGTTTTCTGGATaGTCCTGGGCATGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: KDLPENYHQSLTVLHGTNCTFSG*SWACPL
Trigger: CAAGGGACATGCCCAGGACAATCCAGAAAACGTACA...ATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CAA 90 bp GAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTGTGCGTCCGTATCTATTGGTCATACCCATaGGTCGTTACCCACTGTGCC +
Preference number: 5 (lower is better)
Translates to: EMKEFAPQMGVPCVCVRIYWSYP*VVTHCA
Trigger: GGCACAGTGGGTAACGACCAATGGGTATGACCAATA...GATACGGACGCACACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTCCCCTCCTTTTCTGTATTGGTCATACCCATaGGTCGTTACCCACTGTGCC +
Preference number: 5 (lower is better)
Translates to: LGFSWILRLWCRLSPPFLYWSYP*VVTHCA
Trigger: GGCACAGTGGGTAACGACCAATGGGTATGACCAATA...CAGAAAAGGAGGGGAAAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp GGAGAAGTGAGTCCATGTCTAACTTCTGGGGGCTGGTGTAGATGCTACCCCACAATGCTCCACAGATGCTaGTGGGAGAATGGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: GEVSPCLTSGGWCRCYPTMLHRC*WENGKE
Trigger: TTCCTTTCCATTCTCCCACAAGCATCTGTGGAGCAT...TGTGGGGTAGCATCTACACCAGCCCCCAGAAGTTAGACATGGACTCACTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp TCTTTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTTTGTTGGAGGTTATaGTTTTCCTCCGGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: SFMDGPGDERICTSDGGSLCWRL*FSSGRP
Trigger: GGGCCTCCCGGAGGAAAACAATAACCTCCAACAAAG...GGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTCTTTCATGGATGGGTAACCATGACGAGTTaGGAAAAGCAGGCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: LDKRPLILTLPETFFHGWVTMTS*EKQACG
Trigger: GCCACAGGCCTGCTTTTCCAAACTCGTCATGGTTAC...CCATCCATGAAAGAAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp GACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTTCTCACCATTCTGGACTaGAAGCCGTTCATGAAATGG +
Preference number: 5 (lower is better)
Translates to: DLPENYHQSLTVLHGTNLLTILD*KPFMKW
Trigger: CCATTTCATGAACGGCTTCAAGTCCAGAATGGTGAG...AAGATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CAA 90 bp GACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCAATCTTATGCTCCACAGATGCTaGTGGGAGAATGGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: DLPENYHQSLTVLHGTNLMLHRC*WENGKE
Trigger: TTCCTTTCCATTCTCCCACAAGCATCTGTGGAGCAT...AAGATTGGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp TGTGCGTCCGTATCATGCACTGAACTGACGGAATTAGAGTGGGGCAATGATGATCTTTGTTGGAGGTTATaGTTTTCCTCCGGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: CASVSCTELTELEWGNDDLCWRL*FSSGRP
Trigger: GGGCCTCCCGGAGGAAAACAATAACCTCCAACAAAG...ATCATCATTGCCCCACTCTAATTCCGTCAGTTCAGTGCATGATACGGACGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp GCCTCACTCAGTGACCCACATATGTGGAGAGGGCAGATGTTGCCACTTCCTCCAAACCGTCCTTCTTTGTaGGAGGTTATTGTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: ASLSDPHMWRGQMLPLPPNRPSL*EVIVFL
Trigger: GAGGAAAACAATAACCTCCAACAAAGAAGGACGGTT...TGGAGGAAGTGGCAACATCTGCCCTCTCCACATATGTGGGTCACTGAGTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp ACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCCACATATGTGGAGAGGGCGATGATGAGGTAATATaGCCTTCCATGACAGAAATA +
Preference number: 5 (lower is better)
Translates to: TLATGSGPHSVTHICGEGDDEVI*PSMTEI
Trigger: TATTTCTGTCATGGAAGGCAATATTACCTCATCATC...GCCCTCTCCACATATGTGGGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CTCACTGGCTGGATGATGACTTTGGCGACTGGCAGTGGGCCTCACTCAGTGACCTTTTATATGAGGAACTaGAGCATCCATGGATTTTCG +
Preference number: 5 (lower is better)
Translates to: LTGWMMTLATGSGPHSVTFYMRN*SIHGFS
Trigger: CGAAAATCCATGGATGCTCAAGTTCCTCATATAAAA...GGTCACTGAGTGAGGCCCACTGCCAGTCGCCAAAGTCATCATCCAGCCAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp TGTCTCCTCCTGGCTTCATGGAATAAATTGAGCCACAGACACAAACATACCAGGCTCTCCGAGTGGATGTaGCTGAATGTTCTCGTTCCC +
Preference number: 5 (lower is better)
Translates to: CLLLASWNKLSHRHKHTRLSEWM*LNVLVP
Trigger: GGGAACGAGAACATTCAGCAACATCCACTCGGAGAG...CCTGGTATGTTTGTGTCTGTGGCTCAATTTATTCCATGAAGCCAGGAGGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000637190.1
CDS-3UTR CAA 90 bp AGAAAGGACCTCCCAGAAAACTACCACCAGTCCCTGACTGTCCTTCATGGCACCCTAATCATTCTGGACTaGAAGCCGTTCATGAAATGG +
Preference number: 5 (lower is better)
Translates to: RKDLPENYHQSLTVLHGTLIILD*KPFMKW
Trigger: CCATTTCATGAACGGCTTCAAGTCCAGAATGATTAG...GGTGCCATGAAGGACAGTCAGGGACTGGTGGTAGTTTTCTGGGAGGTCCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637190.1
CDS-3UTR CAA 90 bp GTTCAAGTTCAAACTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTCTCCTCCTTCTGCACTaGCTTTCTCTCCGAGTGGAT +
Preference number: 5 (lower is better)
Translates to: VQVQTGQKTPDPNSTGDFLLLLH*LSLRVD
Trigger: ATCCACTCGGAGAGAAAGCAAGTGCAGAAGGAGGAG...AAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAGTTTGAACTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp TGTGCGTCCGTATCATGCACTGAACTGACGGAATTAGAGTGGGGCAATGATGATATGCTCCACAGATGCTaGTGGGAGAATGGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: CASVSCTELTELEWGNDDMLHRC*WENGKE
Trigger: TTCCTTTCCATTCTCCCACAAGCATCTGTGGAGCAT...ATCATCATTGCCCCACTCTAATTCCGTCAGTTCAGTGCATGATACGGACGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGGCTTTCCCCTCCTTTTCTGAGTCATTTCCCAACGTaGAGTTTCCAATGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LGFSWILRLWCRLSPPFLSHFPT*SFQCFP
Trigger: AGGAAAGCATTGGAAACTCAACGTTGGGAAATGACT...CAGAAAAGGAGGGGAAAGCCTACACCATAATCTCAGGATCCACGAGAAGCCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp GGAACACACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGTCATTTCCCAACGTaGAGTTTCCAATGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: GTHTSELLGFSWILRLWCSHFPT*SFQCFP
Trigger: AGGAAAGCATTGGAAACTCAACGTTGGGAAATGACT...ACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTGTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp GTTCAAGTTCAAACTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTTGTACGTTTTCTGGATaGTCCTGGGCATGTCCCTTG +
Preference number: 5 (lower is better)
Translates to: VQVQTGQKTPDPNSTGDFCTFSG*SWACPL
Trigger: CAAGGGACATGCCCAGGACAATCCAGAAAACGTACA...AAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAGTTTGAACTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTACATCTGGATACTCACTaGCCACGGGCACTCACCATT +
Preference number: 5 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLHLDTH*PRALTI
Trigger: AATGGTGAGTGCCCGTGGCAAGTGAGTATCCAGATG...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CCAGTCCCTGACTGTCCTTCATGGCACCAATCTTTAAATAAACATGGTCTCTTAACTGAAGACACCCACTaGGAAGAGTCTCTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: PVPDCPSWHQSLNKHGLLTEDTH*EESLGS
Trigger: GGAACCCAGAGACTCTTCCAAGTGGGTGTCTTCAGT...TAAGAGACCATGTTTATTTAAAGATTGGTGCCATGAAGGACAGTCAGGGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp GGAACACACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTGCTTCATGGAATAAATaGAGCCACAGACACAAACAT +
Preference number: 5 (lower is better)
Translates to: GTHTSELLGFSWILRLWCASWNK*SHRHKH
Trigger: ATGTTTGTGTCTGTGGCTCAATTTATTCCATGAAGC...ACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTGTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTCTTTCATGGATGGAACCGTCCTTCTTTGTaGGAGGTTATTGTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: LDKRPLILTLPETFFHGWNRPSL*EVIVFL
Trigger: GAGGAAAACAATAACCTCCAACAAAGAAGGACGGTT...CCATCCATGAAAGAAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp GGAACACACACCAGTGAGCTTCTCGGCTTCTCGTGGATCCTGAGATTATGGTGTAGAAGAGGCACAAATTaGGCTGTGACATATACATTA +
Preference number: 5 (lower is better)
Translates to: GTHTSELLGFSWILRLWCRRGTN*AVTYTL
Trigger: TAATGTATATGTCACAGCCAAATTTGTGCCTCTTCT...ACACCATAATCTCAGGATCCACGAGAAGCCGAGAAGCTCACTGGTGTGTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp ATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCCTGTGTTTTTATATGAGGAACTaGAGCATCCATGGATTTTCG +
Preference number: 5 (lower is better)
Translates to: MDGPGDERICTSDGGSLCFYMRN*SIHGFS
Trigger: CGAAAATCCATGGATGCTCAAGTTCCTCATATAAAA...ACACAGGGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp AACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCATTGTACGTTTTCTTTaGTGGACTCCAGAGGTGGAC +
Preference number: 5 (lower is better)
Translates to: NLSIHGFSYPRRVLEPISIVRFL*WTPEVD
Trigger: GTCCACCTCTGGAGTCCACAAAAGAAAACGTACAAT...GGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637190.1
CDS-3UTR CAA 90 bp TGTGCGTCCGTATCATGCACTGAACTGACGGAATTAGAGTGGGGCAATGATGATGCTTCATGGAATAAATaGAGCCACAGACACAAACAT +
Preference number: 5 (lower is better)
Translates to: CASVSCTELTELEWGNDDASWNK*SHRHKH
Trigger: ATGTTTGTGTCTGTGGCTCAATTTATTCCATGAAGC...ATCATCATTGCCCCACTCTAATTCCGTCAGTTCAGTGCATGATACGGACGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp TCTTTCATGGATGGCCCAGGAGATGAAAGAATTTGCACCTCAGATGGGGGTTCCGATGATGAGGTAATATaGCCTTCCATGACAGAAATA +
Preference number: 5 (lower is better)
Translates to: SFMDGPGDERICTSDGGSDDEVI*PSMTEI
Trigger: TATTTCTGTCATGGAAGGCAATATTACCTCATCATC...GGAACCCCCATCTGAGGTGCAAATTCTTTCATCTCCTGGGCCATCCATGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CCCTATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAAAGGCCTGTGGCCACATaGTACGTTTTCTGGATTGTC +
Preference number: 5 (lower is better)
Translates to: PYEKRHKFGCDIYIRCHERPVAT*YVFWIV
Trigger: GACAATCCAGAAAACGTACAATGTGGCCACAGGCCT...TTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CAA 90 bp TATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCAGTAACCATGACGAGTTaGGAAAAGCAGGCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: YEKRHKFGCDIYIRCHEPVTMTS*EKQACG
Trigger: GCCACAGGCCTGCTTTTCCAAACTCGTCATGGTTAC...TGGTTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp GTCACAGAATGTTGGTGTGATGAAAGACCTTACAGTTCATCTAATGGAATCTGCCTCACCATTCTGGACTaGAAGCCGTTCATGAAATGG +
Preference number: 5 (lower is better)
Translates to: VTECWCDERPYSSSNGICLTILD*KPFMKW
Trigger: CCATTTCATGAACGGCTTCAAGTCCAGAATGGTGAG...GCAGATTCCATTAGATGAACTGTAAGGTCTTTCATCACACCAACATTCTGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636217.1
ENST00000647010.1
CDS-3UTR CAA 90 bp GTTCAAGTTCAAACTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTAGTCATTTCCCAACGTaGAGTTTCCAATGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: VQVQTGQKTPDPNSTGDFSHFPT*SFQCFP
Trigger: AGGAAAGCATTGGAAACTCAACGTTGGGAAATGACT...AAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAGTTTGAACTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp GTTCAAGTTCAAACTGGACAAAAGACCCCTGATCCTAACTCTACCGGAGACTTTAGCTGGAACATCTTCTaGTCAATTCCAGTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: VQVQTGQKTPDPNSTGDFSWNIF*SIPVQN
Trigger: ATTTTGGACTGGAATTGACAAGAAGATGTTCCAGCT...AAAGTCTCCGGTAGAGTTAGGATCAGGGGTCTTTTGTCCAGTTTGAACTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636217.1
CDS-3UTR CAA 90 bp AGAAATAAGTTATTAAGCGTCACAGAATGTTGGTGTGATGAAAGACCTTACAGTGTAACCATGACGAGTTaGGAAAAGCAGGCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: RNKLLSVTECWCDERPYSVTMTS*EKQACG
Trigger: GCCACAGGCCTGCTTTTCCAAACTCGTCATGGTTAC...ACTGTAAGGTCTTTCATCACACCAACATTCTGTGACGCTTAATAACTTATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp TATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCATATTGGTCATACCCATaGGTCGTTACCCACTGTGCC +
Preference number: 5 (lower is better)
Translates to: YEKRHKFGCDIYIRCHEPYWSYP*VVTHCA
Trigger: GGCACAGTGGGTAACGACCAATGGGTATGACCAATA...TGGTTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp AACTTGAGCATCCATGGATTTTCGTATCCAAGAAGGGTCCTGGAACCAATTTCCGCTTCATGGAATAAATaGAGCCACAGACACAAACAT +
Preference number: 5 (lower is better)
Translates to: NLSIHGFSYPRRVLEPISASWNK*SHRHKH
Trigger: ATGTTTGTGTCTGTGGCTCAATTTATTCCATGAAGC...GGAAATTGGTTCCAGGACCCTTCTTGGATACGAAAATCCATGGATGCTCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp TATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCAAGGCCTGTGGCCACATaGTACGTTTTCTTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: YEKRHKFGCDIYIRCHEPRPVAT*YVFFCG
Trigger: TCCACAAAAGAAAACGTACAATGTGGCCACAGGCCT...TGGTTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637190.1
CDS-3UTR CAA 90 bp GTCACAGAATGTTGGTGTGATGAAAGACCTTACAGTTCATCTAATGGAATCTGCGATGATGAGGTAATATaGCCTTCCATGACAGAAATA +
Preference number: 5 (lower is better)
Translates to: VTECWCDERPYSSSNGICDDEVI*PSMTEI
Trigger: TATTTCTGTCATGGAAGGCAATATTACCTCATCATC...GCAGATTCCATTAGATGAACTGTAAGGTCTTTCATCACACCAACATTCTGTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp CCCTATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAAAGAAGAGGCACAAATTaGGCTGTGACATATACATTA +
Preference number: 5 (lower is better)
Translates to: PYEKRHKFGCDIYIRCHERRGTN*AVTYTL
Trigger: TAATGTATATGTCACAGCCAAATTTGTGCCTCTTCT...TTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATAGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp TATGAGAAGAGGCACAAATTTGGCTGTGACATATACATTAGATGTCATGAACCATTTTATATGAGGAACTaGAGCATCCATGGATTTTCG +
Preference number: 5 (lower is better)
Translates to: YEKRHKFGCDIYIRCHEPFYMRN*SIHGFS
Trigger: CGAAAATCCATGGATGCTCAAGTTCCTCATATAAAA...TGGTTCATGACATCTAATGTATATGTCACAGCCAAATTTGTGCCTCTTCTCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS-3UTR CAA 90 bp AGAAATAAGTTATTAAGCGTCACAGAATGTTGGTGTGATGAAAGACCTTACAGTAGAAGAGGCACAAATTaGGCTGTGACATATACATTA +
Preference number: 5 (lower is better)
Translates to: RNKLLSVTECWCDERPYSRRGTN*AVTYTL
Trigger: TAATGTATATGTCACAGCCAAATTTGTGCCTCTTCT...ACTGTAAGGTCTTTCATCACACCAACATTCTGTGACGCTTAATAACTTATTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS GCA 72 bp GTGGACCCCACCGTGATCTTTCTGAACCCTGGAATGTaGGAGATTCCAGGGCCCTCGGCCTCAGCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: VDPTVIFLNPGM*EIPGPSASASC
Trigger: GCAGGAGGCTGAGGCCGAGGGCCCTGGAATCTCGCACATTCCAGGGTTCAGAAAGATCACGGTGGGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523024.1
ENST00000637190.1
CDS CCA 72 bp TCCAGAGGTGGACCCCACCGTGATCTTTCTGAACCCTaGAATGTGCGAGATTCCAGGGCCCTCGGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: SRGGPHRDLSEP*NVRDSRALGLS
Trigger: GCTGAGGCCGAGGGCCCTGGAATCTCGCACATTCCAGGGTTCAGAAAGATCACGGTGGGGTCCACCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523024.1
ENST00000637190.1
CDS TCA 72 bp CAGGTCTCCCCCTGGAGCCAGATCTTATGCCCCCACTaGAGACACCCACTTGGAAGAGTCTCTGGGTTCCAT +
Preference number: 6 (lower is better)
Translates to: QVSPWSQILCPH*RHPLGRVSGFH
Trigger: ATGGAACCCAGAGACTCTTCCAAGTGGGTGTCTTCAGTGGGGGCATAAGATCTGGCTCCAGGGGGAGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
ENST00000647727.1
CDS CCA 72 bp CTGCAGGAGCTGAGGGTGATCTTGCTCAGGTACTTCTaGTGGTACCTGCTGTATGGGGAAGAAGTCTGTTCC +
Preference number: 6 (lower is better)
Translates to: LQELRVILLRYF*WYLLYGEEVCS
Trigger: GGAACAGACTTCTTCCCCATACAGCAGGTACCACCAGAAGTACCTGAGCAAGATCACCCTCAGCTCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523024.1
CDS CAA 90 bp TCTCCCCCTGGAGCCAGATCTTATGCCCCCACTGAAGACACCCACTaGGAAGAGTCTCTGGGTTCCATAAATAGCACAAACCAGAGGTGC +
Preference number: 6 (lower is better)
Translates to: SPPGARSYAPTEDTH*EESLGSINSTNQRC
Trigger: GCACCTCTGGTTTGTGCTATTTATGGAACCCAGAGACTCTTCCAAGTGGGTGTCTTCAGTGGGGGCATAAGATCTGGCTCCAGGGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
ENST00000647727.1
CDS CAA 72 bp AGCTTCAGCGTGCAAAGTGAAAGGCCACACAAATCTTaGTCCGTAACAAATGCCCCGTGGACAGGACACTCC +
Preference number: 6 (lower is better)
Translates to: SFSVQSERPHKS*SVTNAPWTGHS
Trigger: GGAGTGTCCTGTCCACGGGGCATTTGTTACGGACAAAGATTTGTGTGGCCTTTCACTTTGCACGCTGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523024.1
CDS TCA 72 bp CCCGTTGCAGCCAGGGTTAAGCTTCAGCGTGCAAAGTaGAAGGCCACACAAATCTTTGTCCGTAACAAATGC +
Preference number: 6 (lower is better)
Translates to: PVAARVKLQRAK*KATQIFVRNKC
Trigger: GCATTTGTTACGGACAAAGATTTGTGTGGCCTTTCACTTTGCACGCTGAAGCTTAACCCTGGCTGCAACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523024.1
CDS CAA 72 bp CTCTCCTCCTCCTGCAGGCAGACAGGCATTTTGAAATaGCTGAATTGCACTGGTGTGGCAAGTAGAAGCAGA +
Preference number: 6 (lower is better)
Translates to: LSSSCRQTGILK*LNCTGVASRSR
Trigger: TCTGCTTCTACTTGCCACACCAGTGCAATTCAGCAATTTCAAAATGCCTGTCTGCCTGCAGGAGGAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523024.1
ENST00000647727.1
CDS CAA 72 bp TCCTCCTTCTGCACTTGCTTTCTCTCCGAGTGGATGTaGCTGAATGTTCTCGTTCCCATGACCACAGTGACA +
Preference number: 6 (lower is better)
Translates to: SSFCTCFLSEWM*LNVLVPMTTVT
Trigger: TGTCACTGTGGTCATGGGAACGAGAACATTCAGCAACATCCACTCGGAGAGAAAGCAAGTGCAGAAGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
CDS CAA 72 bp GGAGCCAGATCTTATGCCCCCACTGAAGACACCCACTaGGAAGAGTCTCTGGGTTCCATAAATAGCACAAAC +
Preference number: 6 (lower is better)
Translates to: GARSYAPTEDTH*EESLGSINSTN
Trigger: GTTTGTGCTATTTATGGAACCCAGAGACTCTTCCAAGTGGGTGTCTTCAGTGGGGGCATAAGATCTGGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
ENST00000647727.1
CDS CCA 72 bp AATGGTAACCATGACGAGTTTGGAAAAGCAGGCCTGTaGCCACATTGTACGTTTTCTGGATTGTCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: NGNHDEFGKAGL*PHCTFSGLSWA
Trigger: TGCCCAGGACAATCCAGAAAACGTACAATGTGGCCACAGGCCTGCTTTTCCAAACTCGTCATGGTTACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000521149.2
ENST00000636217.1
ENST00000647010.1
ENST00000647727.1
CDS CAA 72 bp ATGACCTTCTGCACTTGCTTTCTCTCCGAGTGGATGTaGCTGAATGTTCTCGTTCCCATGACCACAGTGACA +
Preference number: 6 (lower is better)
Translates to: MTFCTCFLSEWM*LNVLVPMTTVT
Trigger: TGTCACTGTGGTCATGGGAACGAGAACATTCAGCAACATCCACTCGGAGAGAAAGCAAGTGCAGAAGGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523024.1
ENST00000647727.1
CDS CAA 90 bp CATTCTGGACTTGAAGCCGTTCATGAAATGGTAACCATGACGAGTTaGGAAAAGCAGGCCTGTGGCCACATTGTACGTTTTCTGGATTGT +
Preference number: 6 (lower is better)
Translates to: HSGLEAVHEMVTMTS*EKQACGHIVRFLDC
Trigger: ACAATCCAGAAAACGTACAATGTGGCCACAGGCCTGCTTTTCCAAACTCGTCATGGTTACCATTTCATGAACGGCTTCAAGTCCAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000521149.2
ENST00000636217.1
ENST00000647010.1
ENST00000647727.1
CDS CAA 72 bp CTTGAAGCCGTTCATGAAATGGTAACCATGACGAGTTaGGAAAAGCAGGCCTGTGGCCACATTGTACGTTTT +
Preference number: 6 (lower is better)
Translates to: LEAVHEMVTMTS*EKQACGHIVRF
Trigger: AAAACGTACAATGTGGCCACAGGCCTGCTTTTCCAAACTCGTCATGGTTACCATTTCATGAACGGCTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000521149.2
ENST00000523024.1
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
ENST00000647727.1
CDS GCA 72 bp TTCCGGCTAATCTGCACCACTCTCAGCTTTTCCAGGTaGATGTTTAAGTCATCATATTGGTCATACCCATTG +
Preference number: 6 (lower is better)
Translates to: FRLICTTLSFSR*MFKSSYWSYPL
Trigger: CAATGGGTATGACCAATATGATGACTTAAACATGCACCTGGAAAAGCTGAGAGTGGTGCAGATTAGCCGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000636217.1
ENST00000637190.1
ENST00000647010.1
ENST00000647727.1