RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRSS36 (Homo sapiens)

Ensembl gene IDs: ENSG00000178226

Ensembl transcript IDs: ENST00000268281.9, ENST00000418068.6, ENST00000561897.1, ENST00000562368.5, ENST00000562390.1, ENST00000563693.1, ENST00000569305.1, ENST00000569614.1, ENST00000571878.1

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGACCAATGGCAGCAAACAGCTCCCGGCTCCCTTGAACAGCCATaGCCACGAGGATCCAGGACCCTTCCGTCATCTGGCACAGGAGGG +
Preference number: 1 (lower is better)
Translates to: QDQWQQTAPGSLEQP*PRGSRTLPSSGTGG
Trigger: CCCTCCTGTGCCAGATGACGGAAGGGTCCTGGATCCTCGTGGGCATGGCTGTTCAAGGGAGCCGGGAGCTGTTTGCTGCCATTGGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571878.1
3UTR CCA 90 bp TGGCCTCTCCCACTGTCTGGGAGATCCAGGCCTCTTCAGGACCAATaGCAGCAAACAGCTCCCGGCTCCCTTGAACAGCCATGCCCACGA +
Preference number: 1 (lower is better)
Translates to: WPLPLSGRSRPLQDQ*QQTAPGSLEQPCPR
Trigger: TCGTGGGCATGGCTGTTCAAGGGAGCCGGGAGCTGTTTGCTGCCATTGGTCCTGAAGAGGCCTGGATCTCCCAGACAGTGGGAGAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571878.1
3UTR CCA 90 bp TTTACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTaGGTTCAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCC +
Preference number: 1 (lower is better)
Translates to: FTPLLSAPPTTPKDS*VQNSPGTEAQLARA
Trigger: GGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
3UTR-3UTR CCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGAAGTaGTGCTGGGACCCTAGCCCC +
Preference number: 2 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGWRRGK*CWDPSP
Trigger: GGGGCTAGGGTCCCAGCACCACTTCCCCCTTCTCCA...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
3UTR-3UTR CCA 90 bp GGAGAGTCAGCAGGAGCAGGAAGTAGACTGCATGCGGGGATCCCGAGGCCTTGGGATTGCTGCCTCCAGTaGGCCAGTGTGGGGAGCCAC +
Preference number: 2 (lower is better)
Translates to: GESAGAGSRLHAGIPRPWDCCLQ*ASVGSH
Trigger: GTGGCTCCCCACACTGGCCCACTGGAGGCAGCAATC...CCAAGGCCTCGGGATCCCCGCATGCAGTCTACTTCCTGCTCCTGCTGACTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571878.1
3UTR-3UTR CCA 90 bp ATCCAGGACCCTTCCGTCATCTGGCACAGGAGGGGCGGTGCTGAGGTCATCTCATGGAGAAGGGGGAAGTaGTGCTGGGACCCTAGCCCC +
Preference number: 2 (lower is better)
Translates to: IQDPSVIWHRRGGAEVISWRRGK*CWDPSP
Trigger: GGGGCTAGGGTCCCAGCACCACTTCCCCCTTCTCCA...TGAGATGACCTCAGCACCGCCCCTCCTGTGCCAGATGACGGAAGGGTCCTGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571878.1
3UTR-3UTR CCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCAACATTCCAGCCCCACTaGGCGGGAAGTAGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: AQLARAAAISVGGALEVPTFQPH*AGSRGW
Trigger: CCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGT...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
3UTR-3UTR GCA 90 bp TCCAGGACCCTTCCGTCATCTGGCACAGGAGGGGCGGTGCTGAGGTCATCTCACTTCCAGGGGGCAGGATaGCCTGATAGAGGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: SRTLPSSGTGGAVLRSSHFQGAG*PDRGSH
Trigger: GTGACTGCCTCTATCAGGGCATCCTGCCCCCTGGAA...GTGAGATGACCTCAGCACCGCCCCTCCTGTGCCAGATGACGGAAGGGTCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571878.1
3UTR-3UTR CCA 90 bp TGTGTTTACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTGGAGAAGGGGGAAGTaGTGCTGGGACCCTAGCCCC +
Preference number: 2 (lower is better)
Translates to: CVYTFIVRSSHHPQGFLGWRRGK*CWDPSP
Trigger: GGGGCTAGGGTCCCAGCACCACTTCCCCCTTCTCCA...ACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTAAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268281.9
3UTR-3UTR GCA 90 bp CTCTTCAGGACCAATGGCAGCAAACAGCTCCCGGCTCCCTTGAACAGCCATGCCTCACACCTGTTCTCCTaGCCCTCTGCATACAGGACA +
Preference number: 2 (lower is better)
Translates to: LFRTNGSKQLPAPLNSHASHLFS*PSAYRT
Trigger: TGTCCTGTATGCAGAGGGGCAGGAGAACAGGTGTGA...GGCATGGCTGTTCAAGGGAGCCGGGAGCTGTTTGCTGCCATTGGTCCTGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571878.1
3UTR-3UTR CCA 90 bp TACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAAACATTCCAGCCCCACTaGGCGGGAAGTAGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: YTFIVRSSHHPQGFLGSKTFQPH*AGSRGW
Trigger: CCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGT...TTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268281.9
3UTR TCA 72 bp AGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTaGGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCA +
Preference number: 3 (lower is better)
Translates to: SQSRCNLGGWGP*GSSRLGHIPAP
Trigger: TGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
3UTR CCA 72 bp GCCATGCCCACGAGGATCCAGGACCCTTCCGTCATCTaGCACAGGAGGGGCGGTGCTGAGGTCATCTCACAC +
Preference number: 3 (lower is better)
Translates to: AMPTRIQDPSVI*HRRGGAEVISH
Trigger: GTGTGAGATGACCTCAGCACCGCCCCTCCTGTGCCAGATGACGGAAGGGTCCTGGATCCTCGTGGGCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571878.1
3UTR GCA 72 bp TGGCAGCAAACAGCTCCCGGCTCCCTTGAACAGCCATaGCCACGAGGATCCAGGACCCTTCCGTCATCTGGC +
Preference number: 3 (lower is better)
Translates to: WQQTAPGSLEQP*PRGSRTLPSSG
Trigger: GCCAGATGACGGAAGGGTCCTGGATCCTCGTGGGCATGGCTGTTCAAGGGAGCCGGGAGCTGTTTGCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571878.1
3UTR GCA 72 bp AGGGGCGGTGCTGAGGTCATCTCACACCTGTTCTCCTaGCCCTCTGCATACAGGACACAGAGGGTTCCAGGG +
Preference number: 3 (lower is better)
Translates to: RGGAEVISHLFS*PSAYRTQRVPG
Trigger: CCCTGGAACCCTCTGTGTCCTGTATGCAGAGGGGCAGGAGAACAGGTGTGAGATGACCTCAGCACCGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571878.1
3UTR GCA 72 bp CTGGATCAGGAGAGTCAGCAGGAGCAGGAAGTAGACTaGATGCGGGGATCCCGAGGCCTTGGCCAGTTCTGG +
Preference number: 3 (lower is better)
Translates to: LDQESQQEQEVD*MRGSRGLGQFW
Trigger: CCAGAACTGGCCAAGGCCTCGGGATCCCCGCATGCAGTCTACTTCCTGCTCCTGCTGACTCTCCTGATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571878.1
3UTR CCA 72 bp TTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTaGGTTCAAAATAGCCCGGGCACTGAGGCCCAATTA +
Preference number: 3 (lower is better)
Translates to: LLSAPPTTPKDS*VQNSPGTEAQL
Trigger: TAATTGGGCCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAACACGATGGCGGCCACTaGGCGGGTGTGCGCGCCGTC +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREHDGGH*AGVRAV
Trigger: GACGGCGCGCACACCCGCGCAGTGGCCGCCATCGTG...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTGCACGAAGCGGTGTaGGGCGCGGGGCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREVHEAV*GAGQAD
Trigger: GTCTGCCTGCCCCGCGCCTCACACCGCTTCGTGCAC...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGGGTGGGTGGGGCCCTTaGGGTTCCAGCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGGGWGP*GSSRLG
Trigger: GCCCAGCCGGCTGGAACCTCAAGGGCCCCACCCACC...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGCACGATGGCGGCCACTaGGCGGGTGTGCGCGCCGTC +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRHDGGH*AGVRAV
Trigger: GACGGCGCGCACACCCGCGCAGTGGCCGCCATCGTG...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAACGGGCGTGCGCAGCTaGAGCAGCGCCAGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGRETGVRS*SSARSE
Trigger: CTCGGACCTGGCGCTGCTGCAGCTGCGCACGCCCGT...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTCCGGGCAGCGGTACTaGCGCCCCCTGGCGGCCGTA +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGSGQRY*RPLAAV
Trigger: TACGGCCGCCAGGGGGCGGCAGTACCGCTGCCCGGA...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGCTCCAGCAGCGCGCCTaGGCCAAGCGCGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGLQQRA*AKRGFP
Trigger: GGGGAACCCGCGCTTGGCCCAGGCGCGCTGCTGGAG...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAACCTGTGGGAGGGAGCTaGCCCCTGCCCGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREPVGGS*PLPGPD
Trigger: ATCTGGGCCGGGCAGGGGCCAGCTCCCTCCCACAGG...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGGTGGGTGGGGCCCTTaGGGTTCCAGCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGGGWGP*GSSRLG
Trigger: GCCCAGCCGGCTGGAACCTCAAGGGCCCCACCCACC...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAACAGGAGGGGCGGTGCTaGGGTCATCTGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREQEGRC*GHLVAL
Trigger: CAGGGCCACCAGATGACCTCAGCACCGCCCCTCCTG...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418068.6
CDS-3UTR GCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGGCCTGAGTCCCAGGTaGTGGGGCAGCCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREGLSPR*WGSRML
Trigger: CAGCATCCGGCTGCCCCAGCACCTGGGACTCAGGCC...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAATCCAGGGGCCCGTCCTaGGAGTGCACGCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGRESRGPS*ECTPSS
Trigger: ACTGCTGGGCGTGCACTCCCAGGACGGGCCCCTGGA...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGTGGCCGGCACCACGATaGCGGCCACTGCGCGGGTGT +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRWPAPR*RPLRGC
Trigger: ACACCCGCGCAGTGGCCGCCATCGTGGTGCCGGCCA...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAATACCTGGTGGCCCTGTaGGAGGGAGCTGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREYLVAL*EGAGPC
Trigger: GCAGGGGCCAGCTCCCTCCCACAGGGCCACCAGGTA...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR TCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGGGCTCCTGGGGATCTaGCTGGGTCTTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREGLLGI*LGLLGL
Trigger: CAGCCCCAGAAGACCCAGTCAGATCCCCAGGAGCCC...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGCAGCAGGCGGTGCCGTaGACGAAGCGGTGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRQQAVP*TKRCEA
Trigger: CGCCTCACACCGCTTCGTGCACGGCACCGCCTGCTG...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGCCCAGCAGGCGGTaGCGTGCACGAAGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGWPSRR*RARSGV
Trigger: CACACCGCTTCGTGCACGGCACCGCCTGCTGGGCCA...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGCCTGGCAGGTGTCCCTaGGGCCCTCTGGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRPGRCP*GPLGSQ
Trigger: CTGGCTACCCAGAGGGCCGCAGGGACACCTGCCAGG...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAACACGAAGCGTTCTCGTaGTGCACCAGGCGCGCCACC +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREHEAFS*CTRRAT
Trigger: GGTGGCGCGCCTGGTGCAGCACGAGAACGCTTCGTG...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGAACGGGCGTGCGCAGCTaGAGCAGCGCCAGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGTGVRS*SSARSE
Trigger: CTCGGACCTGGCGCTGCTGCAGCTGCGCACGCCCGT...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGATCCGGGCAGCGGTACTaGCGCCCCCTGGCGGCCGTA +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRSGQRY*RPLAAV
Trigger: TACGGCCGCCAGGGGGCGGCAGTACCGCTGCCCGGA...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGATGGCCGGCACCACGATaGCGGCCACTGCGCGGGTGT +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGWPAPR*RPLRGC
Trigger: ACACCCGCGCAGTGGCCGCCATCGTGGTGCCGGCCA...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGACTCCAGCAGCGCGCCTaGGCCAAGCGCGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRLQQRA*AKRGFP
Trigger: GGGGAACCCGCGCTTGGCCCAGGCGCGCTGCTGGAG...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGAGGTACTGCCGCCCCCTaGCGGCCGTACAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGGTAAP*RPYRQW
Trigger: CCACTGCCTGTACGGCCGCCAGGGGGCGGCAGTACC...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGCCACAGGACCCCCACTaGAGCAGCCTCCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGPQDPH*SSLQPQ
Trigger: CTGCGGCTGGAGGCTGCTCCAGTGGGGGTCCTGTGG...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAATGCCAGGACCCAGCCTaGGGCCAGGAGGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGRECQDPA*GQEDPS
Trigger: ACTGGGATCCTCCTGGCCCCAGGCTGGGTCCTGGCA...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGACCTGTGGGAGGGAGCTaGCCCCTGCCCGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGPVGGS*PLPGPD
Trigger: ATCTGGGCCGGGCAGGGGCCAGCTCCCTCCCACAGG...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAACCGGGTGGAGACAGATaGGCAGGGCTGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREPGGDR*AGLMGR
Trigger: CCTCCCCATCAGCCCTGCCCATCTGTCTCCACCCGG...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGAGGTTCCAGCCGGCTaGGCCACATTCCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREEVPAG*ATFQPH
Trigger: GTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp TGCCCACGAGGATCCAGGACCCTTCCGTCATCTGGCACAGGAGGGGCGGTGCTGGGACTGGTGGCCCTGTaGGAGGGAGCTGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: CPRGSRTLPSSGTGGAVLGLVAL*EGAGPC
Trigger: GCAGGGGCCAGCTCCCTCCCACAGGGCCACCAGTCC...CAGCACCGCCCCTCCTGTGCCAGATGACGGAAGGGTCCTGGATCCTCGTGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR TCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGGCAGGCCCAGGCTCTaGACCCATCACCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGGRPRL*THHLLP
Trigger: CGGGAGCAGGTGATGGGTTCAGAGCCTGGGCCTGCC...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGCCTGAGGACACAGTaGGTGGCTGCCAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRGLRTQ*VAARTQ
Trigger: CTGGGTCCTGGCAGCCACTCACTGTGTCCTCAGGCC...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGGTGGGTGGGGCCCTTaGGGTTCCAGCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALEGGWGP*GSSRLG
Trigger: GCCCAGCCGGCTGGAACCTCAAGGGCCCCACCCACC...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAAGGGGGAGGAGCAGGTaGCGGGCCATGGCGCTAGAG +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGRGRSR*RAMALE
Trigger: CTCTAGCGCCATGGCCCGGCACCTGCTCCTCCCCCT...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGAAGGGGGAGGAGCAGGTaGCGGGCCATGGCGCTAGAG +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGRGRSR*RAMALE
Trigger: CTCTAGCGCCATGGCCCGGCACCTGCTCCTCCCCCT...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGTGGTGCAGGCTCACTTaGCAAGGCCAGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRWCRLT*QGQVPG
Trigger: GCCGGGCACCTGGCCTTGGCAAGTGAGCCTGCACCA...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGGCCCGTCCTGGGAGTaGACGCCCAGCAGTACCGAC +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGGPSWE*TPSSTD
Trigger: GTCGGTACTGCTGGGCGTGCACTCCCAGGACGGGCC...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGGGGGCAGAGATTGCTaGCTCCAGTGGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREGGRDC*LQWASV
Trigger: CACACTGGCCCACTGGAGGCAGCAATCTCTGCCCCC...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGACCCCCAGAGTCACCCTaGCAGGTGTCCCTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRPPESP*QVSLRP
Trigger: GGGCCGCAGGGACACCTGCCAGGGTGACTCTGGGGG...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGTCGAGGTCGCGGGGTaGGCTGTCGGAGCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGVEVAG*AVGAVR
Trigger: CCGAACAGCTCCGACAGCCCACCCCGCGACCTCGAC...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCACTCCAGCAGCGCGCCTaGGCCAAGCGCGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPLQQRA*AKRGFP
Trigger: GGGGAACCCGCGCTTGGCCCAGGCGCGCTGCTGGAG...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGATACCTGGTGGCCCTGTaGGAGGGAGCTGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGYLVAL*EGAGPC
Trigger: GCAGGGGCCAGCTCCCTCCCACAGGGCCACCAGGTA...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGATTGCTGCCTCCAGTaGGCCAGTGTGGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREDCCLQ*ASVGSH
Trigger: GTGGCTCCCCACACTGGCCCACTGGAGGCAGCAATC...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGGCCTTGGCCAGTTCTaGGGGGCAGAGATTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREGLGQF*GAEIAA
Trigger: GGCAGCAATCTCTGCCCCCCAGAACTGGCCAAGGCC...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAATGGAGAAGGGGGAAGTaGTGCTGGGACCCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREWRRGK*CWDPSP
Trigger: GGGGCTAGGGTCCCAGCACCACTTCCCCCTTCTCCA...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGAGGTTCCAGCCGGCTaGGCCACATTCCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRREVPAG*ATFQPH
Trigger: GTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGACATCTGGTGGCCCTGTaGGAGGGAGCTGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGHLVAL*EGAGPC
Trigger: GCAGGGGCCAGCTCCCTCCCACAGGGCCACCAGATG...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418068.6
CDS-3UTR TCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCAGTGCACGAAGCGGTGTaGGGCGCGGGGCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPVHEAV*GAGQAD
Trigger: GTCTGCCTGCCCCGCGCCTCACACCGCTTCGTGCAC...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGAGGGCTCCTGGGGATCTaGCTGGGTCTTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGGLLGI*LGLLGL
Trigger: CAGCCCCAGAAGACCCAGTCAGATCCCCAGGAGCCC...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGGGCTCCTGGGGATCTaGCTGGGTCTTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGGLLGI*LGLLGL
Trigger: CAGCCCCAGAAGACCCAGTCAGATCCCCAGGAGCCC...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGACTTGCCAAGGCCAGGTaGCCGGCTGCGCGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGLAKAR*PAARLS
Trigger: GCTCAAACGCGCAGCCGGGCACCTGGCCTTGGCAAG...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAATGGCCACCTCCATGGTaGAGGCTCACTTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREWPPPW*RLTCQG
Trigger: GCCTTGGCAAGTGAGCCTGCACCATGGAGGTGGCCA...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGATGGCCCAGCAGGCGGTaGCGTGCACGAAGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRWPSRR*RARSGV
Trigger: CACACCGCTTCGTGCACGGCACCGCCTGCTGGGCCA...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCAACGGGCGTGCGCAGCTaGAGCAGCGCCAGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPTGVRS*SSARSE
Trigger: CTCGGACCTGGCGCTGCTGCAGCTGCGCACGCCCGT...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGATCAGGTTCACGGGCGTaGGCAGCTGCAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGSGSRA*AAAAAP
Trigger: TGGCGCTGCTGCAGCTGCGCACGCCCGTGAACCTGA...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGAGCCACATGCACCTCTaGCAGCCAGGGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRSHMHL*QPGPQD
Trigger: GTCCTGTGGCCCTGGCTGGCAGAGGTGCATGTGGCT...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGAGACACAGTGAGTGGCTaGCAGGACCCAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGDTVSG*QDPAWG
Trigger: GCCCCAGGCTGGGTCCTGGCAGCCACTCACTGTGTC...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGACACAGTGAGTGGCTaGCAGGACCCAGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGDTVSG*QDPAWG
Trigger: GCCCCAGGCTGGGTCCTGGCAGCCACTCACTGTGTC...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGAGAGGGAGCTGGCCCCTaGCCGGCCCAGATACACTTC +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGEGAGP*PAQIHF
Trigger: GAAGTGTATCTGGGCCGGGCAGGGGCCAGCTCCCTC...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp CCATGCCCACGAGGATCCAGGACCCTTCCGTCATCTGGCACAGGAGGGGCGGTGGAGGGAGCTGGCCCCTaGCCGGCCCAGATACACTTC +
Preference number: 4 (lower is better)
Translates to: PCPRGSRTLPSSGTGGAVEGAGP*PAQIHF
Trigger: GAAGTGTATCTGGGCCGGGCAGGGGCCAGCTCCCTC...CACCGCCCCTCCTGTGCCAGATGACGGAAGGGTCCTGGATCCTCGTGGGCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR CCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGCCACTTGGCTGTAGTTaGCCGGCACCACGATGGCGG +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGPLGCS*PAPRWR
Trigger: CCGCCATCGTGGTGCCGGCCAACTACAGCCAAGTGG...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAACCCCATGGCAGGGTCTaGATCCTGGCACCATCACCT +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREPHGRV*ILAPSP
Trigger: AGGTGATGGTGCCAGGATCCAGACCCTGCCATGGGG...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGAGACACCAGCGCCCCATaGCAGGGTCTGGATCCTGGC +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGDTSAP*QGLDPG
Trigger: GCCAGGATCCAGACCCTGCCATGGGGCGCTGGTGTC...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGACGGCCGTACAGGCAGTaGCACCACCAGCCGCCTAAC +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGRPYRQ*HHQPPN
Trigger: GTTAGGCGGCTGGTGGTGCCACTGCCTGTACGGCCG...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp CTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGCCCGGGCACTGAGGCCCGGTACTGCCGCCCCCTaGCGGCCGTACAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LPPPPRIPGFKIARALRPGTAAP*RPYRQW
Trigger: CCACTGCCTGTACGGCCGCCAGGGGGCGGCAGTACC...GGGCCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGAAGCGGGATACCTGGTaGCCCTGTGGGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGKRDTW*PCGREL
Trigger: CAGCTCCCTCCCACAGGGCCACCAGGTATCCCGCTT...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGACCAAGCGGGATACCTaGTGGCCCTGTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRTKRDT*WPCGRE
Trigger: CTCCCTCCCACAGGGCCACCAGGTATCCCGCTTGGT...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGCTGAGTCCCAGGTGCTaGGGCAGCCGGATGCTGATG +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRLSPRC*GSRMLM
Trigger: CATCAGCATCCGGCTGCCCCAGCACCTGGGACTCAG...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGTGGAGAAGGGGGAAGTaGTGCTGGGACCCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRWRRGK*CWDPSP
Trigger: GGGGCTAGGGTCCCAGCACCACTTCCCCCTTCTCCA...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGGGTGCTGAGGTCATCTaGTGGCCCTGTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGGAEVI*WPCGRE
Trigger: CTCCCTCCCACAGGGCCACCAGATGACCTCAGCACC...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418068.6
CDS-3UTR CCA 90 bp TGCCCACGAGGATCCAGGACCCTTCCGTCATCTGGCACAGGAGGGGCGGTGCTGAGCCACAGGGACTGGTaGCCCTGTGGGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CPRGSRTLPSSGTGGAVLSHRDW*PCGREL
Trigger: CAGCTCCCTCCCACAGGGCCACCAGTCCCTGTGGCT...CAGCACCGCCCCTCCTGTGCCAGATGACGGAAGGGTCCTGGATCCTCGTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR TCA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGTGCACGAAGCGGTGTaGGGCGCGGGGCAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: NSPGTEAQLARAAAISVGVHEAV*GAGQAD
Trigger: GTCTGCCTGCCCCGCGCCTCACACCGCTTCGTGCAC...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR TCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCAGGCAGGCCCAGGCTCTaGACCCATCACCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPGRPRL*THHLLP
Trigger: CGGGAGCAGGTGATGGGTTCAGAGCCTGGGCCTGCC...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCAAGGGGGAGGAGCAGGTaGCGGGCCATGGCGCTAGAG +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPRGRSR*RAMALE
Trigger: CTCTAGCGCCATGGCCCGGCACCTGCTCCTCCCCCT...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGATGGTGCAGGCTCACTTaGCAAGGCCAGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRWCRLT*QGQVPG
Trigger: GCCGGGCACCTGGCCTTGGCAAGTGAGCCTGCACCA...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGGCCCGTCCTGGGAGTaGACGCCCAGCAGTACCGAC +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALEGPSWE*TPSSTD
Trigger: GTCGGTACTGCTGGGCGTGCACTCCCAGGACGGGCC...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGGAGAGGCAGAGGATCTaGCTCCTGGACGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGERQRI*LLDVSP
Trigger: TGGGGAGACGTCCAGGAGGCAGATCCTCTGCCTCTC...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCACCTGGCAGGTGTCCCTaGGGCCCTCTGGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPPGRCP*GPLGSQ
Trigger: CTGGCTACCCAGAGGGCCGCAGGGACACCTGCCAGG...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAAGGCCACAGGCACCATaGTCTGTGTGTGGGGGACAA +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGRERPQAP*SVCGGQ
Trigger: TTGTCCCCCACACACAGAGCATGGTGCCTGTGGCCT...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAAGCCACATGCACCTCTaGCAGCCAGGGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGSHMHL*QPGPQD
Trigger: GTCCTGTGGCCCTGGCTGGCAGAGGTGCATGTGGCT...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAATTCCAGGGGGCAGGATaGCCTGATAGAGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREFQGAG*PDRGSH
Trigger: GTGACTGCCTCTATCAGGGCATCCTGCCCCCTGGAA...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR GCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGATTAGCCAGAGCCGCTaGAATCTCGGTGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGISQSR*NLGGWG
Trigger: GCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAAT...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCATCCAGGGGCCCGTCCTaGGAGTGCACGCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPSRGPS*ECTPSS
Trigger: ACTGCTGGGCGTGCACTCCCAGGACGGGCCCCTGGA...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGAAGAGGATCTGCCTCCTaGACGTCTCCCCAGCCGGTG +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGRGSAS*TSPQPV
Trigger: CACCGGCTGGGGAGACGTCCAGGAGGCAGATCCTCT...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGTCCCTGCGGCCCTCTaGGTAGCCAGCACACAGCAT +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGVPAAL*VASTQH
Trigger: ATGCTGTGTGCTGGCTACCCAGAGGGCCGCAGGGAC...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp CCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGCCCGGGCACTGAGGCCCAACCCCCAGAGTCACCCTaGCAGGTGTCCCTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: PTTPKDSWVQNSPGTEAQPPESP*QVSLRP
Trigger: GGGCCGCAGGGACACCTGCCAGGGTGACTCTGGGGG...TTGGGCCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTCCTGGGGATCTGACTaGGTCTTCTGGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGSWGSD*VFWGWV
Trigger: CACCCAGCCCCAGAAGACCCAGTCAGATCCCCAGGA...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAATGCAGTTCTCCTCCCTaGGCTCCTGGGGATCTGACT +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGRECSSPP*APGDLT
Trigger: AGTCAGATCCCCAGGAGCCCAGGGAGGAGAACTGCA...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGCCCCATGGCAGGGTCTaGATCCTGGCACCATCACCT +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRPHGRV*ILAPSP
Trigger: AGGTGATGGTGCCAGGATCCAGACCCTGCCATGGGG...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGGGTCCAGAAAGCAGCTaGCAGGTGCCAAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGGPESS*QVPRPS
Trigger: GCTGGGTCTTGGCACCTGCCAGCTGCTTTCTGGACC...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCAGTCGAGGTCGCGGGGTaGGCTGTCGGAGCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPVEVAG*AVGAVR
Trigger: CCGAACAGCTCCGACAGCCCACCCCGCGACCTCGAC...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGTACTGCCGCCCCCTaGCGGCCGTACAGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: NSPGTEAQLARAAAISVGGTAAP*RPYRQW
Trigger: CCACTGCCTGTACGGCCGCCAGGGGGCGGCAGTACC...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR CCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGCAGGTCCCCTCCTCCTaGCACAAAAGGCTCCAACGC +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGQVPSS*HKRLQR
Trigger: GCGTTGGAGCCTTTTGTGCCAGGAGGAGGGGACCTG...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp CTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGCCCGGGCACTGAGGCCCCCACAGGACCCCCACTaGAGCAGCCTCCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LPPPPRIPGFKIARALRPPQDPH*SSLQPQ
Trigger: CTGCGGCTGGAGGCTGCTCCAGTGGGGGTCCTGTGG...GGGCCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTCCTGTGGGAGGGAGCTaGCCCCTGCCCGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: NSPGTEAQLARAAAISVGPVGGS*PLPGPD
Trigger: ATCTGGGCCGGGCAGGGGCCAGCTCCCTCCCACAGG...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR CCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAACCAAGCGGGATACCTaGTGGCCCTGTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGTKRDT*WPCGRE
Trigger: CTCCCTCCCACAGGGCCACCAGGTATCCCGCTTGGT...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR CCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGACCGGGTGGAGACAGATaGGCAGGGCTGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRPGGDR*AGLMGR
Trigger: CCTCCCCATCAGCCCTGCCCATCTGTCTCCACCCGG...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAACAGGGACTCGGTCCTaGGGTTCTTTCCAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGRETGTRS*GSFQPN
Trigger: GTTGGGCTGGAAAGAACCCCAGGACCGAGTCCCTGT...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR CCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGGCCTTGGCCAGTTCTaGGGGGCAGAGATTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGGLGQF*GAEIAA
Trigger: GGCAGCAATCTCTGCCCCCCAGAACTGGCCAAGGCC...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp TGCCCACGAGGATCCAGGACCCTTCCGTCATCTGGCACAGGAGGGGCGGTGCTGGGCCTTGGCCAGTTCTaGGGGGCAGAGATTGCTGCC +
Preference number: 4 (lower is better)
Translates to: CPRGSRTLPSSGTGGAVLGLGQF*GAEIAA
Trigger: GGCAGCAATCTCTGCCCCCCAGAACTGGCCAAGGCC...CAGCACCGCCCCTCCTGTGCCAGATGACGGAAGGGTCCTGGATCCTCGTGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR CCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGACATTCCAGCCCCACTaGGCGGGAAGTAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGTFQPH*AGSRGW
Trigger: CCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGT...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGACCGCTGCAATCTCGGTaGGTGGGGCCCTTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGPLQSR*VGPLRF
Trigger: GAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGG...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGACCGCTGCAATCTCGGTaGGTGGGGCCCTTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGPLQSR*VGPLRF
Trigger: GAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGG...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGCTGAGGTCATCTGGTaGCCCTGTGGGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGAEVIW*PCGREL
Trigger: CAGCTCCCTCCCACAGGGCCACCAGATGACCTCAGC...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418068.6
CDS-3UTR TCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAATTCGTCATGAAACAGTaGGCAGCGGAGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREFVMKQ*AAERTQ
Trigger: CTGGGTCCTCTCCGCTGCTCACTGTTTCATGACGAA...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAACAAAGCCAAAGCTGGTaGTTCCTGCCTGGAACCAGC +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREQSQSW*FLPGTS
Trigger: GCTGGTTCCAGGCAGGAATCACCAGCTTTGGCTTTG...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGCAGGCCCAGGCTCTaGACCCATCACCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: NSPGTEAQLARAAAISVGGRPRL*THHLLP
Trigger: CGGGAGCAGGTGATGGGTTCAGAGCCTGGGCCTGCC...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR TCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAACTGATCCATGGGCCATaGGTCTGCAGAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGRELIHGP*VCRGKK
Trigger: CTTCTTCCCTCTGCAGACTCATGGCCCATGGATCAG...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGCCCGAGTCACATGGCTaGTCCATGGGCCATGAGTCT +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRPESHG*SMGHES
Trigger: AGACTCATGGCCCATGGATCAGCCATGTGACTCGGG...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGACAGGAGGGGCGGTGCTaGGGTCATCTCACACCTGTT +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGQEGRC*GHLTPV
Trigger: AACAGGTGTGAGATGACCTCAGCACCGCCCCTCCTG...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR GCA 90 bp CTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGCCCGGGCACTGAGGCCCCTTGCCAAGGCCAGGTaGCCGGCTGCGCGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: LPPPPRIPGFKIARALRPLAKAR*PAARLS
Trigger: GCTCAAACGCGCAGCCGGGCACCTGGCCTTGGCAAG...GGGCCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGCCCGTCCTGGGAGTaGACGCCCAGCAGTACCGAC +
Preference number: 4 (lower is better)
Translates to: NSPGTEAQLARAAAISVGGPSWE*TPSSTD
Trigger: GTCGGTACTGCTGGGCGTGCACTCCCAGGACGGGCC...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR GCA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTCAGCAGGCGGTGCCGTaGACGAAGCGGTGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: NSPGTEAQLARAAAISVGQQAVP*TKRCEA
Trigger: CGCCTCACACCGCTTCGTGCACGGCACCGCCTGCTG...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR GCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGAAAAGCTGGTGATTCCTaGCTGGAACCAGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGKAGDS*LEPAAA
Trigger: GGCGGCCGCTGGTTCCAGGCAGGAATCACCAGCTTT...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAAAAGCTGGTGATTCCTaGCTGGAACCAGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGKAGDS*LEPAAA
Trigger: GGCGGCCGCTGGTTCCAGGCAGGAATCACCAGCTTT...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGCCAGGAGGATCCCAGTaGAGACTCGATCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGPGGSQ*RLDHQP
Trigger: TGGCTGGTGATCGAGTCTGCACTGGGATCCTCCTGG...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGCCAGGAGGATCCCAGTaGAGACTCGATCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRPGGSQ*RLDHQP
Trigger: TGGCTGGTGATCGAGTCTGCACTGGGATCCTCCTGG...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGAGGGAGCTGGCCCCTaGCCGGCCCAGATACACTTC +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALEEGAGP*PAQIHF
Trigger: GAAGTGTATCTGGGCCGGGCAGGGGCCAGCTCCCTC...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGCCTGAGTCCCAGGTaGTGGGGCAGCCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: NSPGTEAQLARAAAISVGGLSPR*WGSRML
Trigger: CAGCATCCGGCTGCCCCAGCACCTGGGACTCAGGCC...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGTCCCTTGAACAGCCATaGCCACGAGGATCCAGGACC +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRSLEQP*PRGSRT
Trigger: GGTCCTGGATCCTCGTGGGCATGGCTGTTCAAGGGA...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGAAGAAGGGGGAAGTGGTaGTGGGACCCTAGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGRRGKW*WDPSPS
Trigger: TGAGGGGCTAGGGTCCCAGCACCACTTCCCCCTTCT...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTCCTGGAAGGCTCCTaGGATGGGACTGATGACAAG +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREVLEGS*DGTDDK
Trigger: CTTGTCATCAGTCCCATCCCAGGAGCCTTCCAGGAC...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCAGAGCCCCCGCAGATGTaGCCACCTCCATGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPEPPQM*PPPWCR
Trigger: CCTGCACCATGGAGGTGGCCACATCTGCGGGGGCTC...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGACCACTTGGCTGTAGTTaGCCGGCACCACGATGGCGG +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRPLGCS*PAPRWR
Trigger: CCGCCATCGTGGTGCCGGCCAACTACAGCCAAGTGG...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGATCCTGGGGATCTGACTaGGTCTTCTGGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGSWGSD*VFWGWV
Trigger: CACCCAGCCCCAGAAGACCCAGTCAGATCCCCAGGA...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGACACCAGCGCCCCATaGCAGGGTCTGGATCCTGGC +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALEDTSAP*QGLDPG
Trigger: GCCAGGATCCAGACCCTGCCATGGGGCGCTGGTGTC...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCACGGCCGTACAGGCAGTaGCACCACCAGCCGCCTAAC +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPRPYRQ*HHQPPN
Trigger: GTTAGGCGGCTGGTGGTGCCACTGCCTGTACGGCCG...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAACACATGGCTGATCCATaGGCCATGAGTCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREHMADP*AMSLQR
Trigger: CCTCTGCAGACTCATGGCCCATGGATCAGCCATGTG...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGTGCCAGGACCCAGCCTaGGGCCAGGAGGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALECQDPA*GQEDPS
Trigger: ACTGGGATCCTCCTGGCCCCAGGCTGGGTCCTGGCA...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCGGTGCTGAGGTCATCTCACACCTGTTCTCCTGCCCCTCTGCATACAGGACACCCTGTGGGAGGGAGCTaGCCCCTGCCCGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: AVLRSSHTCSPAPLHTGHPVGGS*PLPGPD
Trigger: ATCTGGGCCGGGCAGGGGCCAGCTCCCTCCCACAGG...GTGTCCTGTATGCAGAGGGGCAGGAGAACAGGTGTGAGATGACCTCAGCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR CCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCAGGGATACCCGCCGGGTaGAGACAGATGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPGIPAG*RQMGRA
Trigger: AGCCCTGCCCATCTGTCTCCACCCGGCGGGTATCCC...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR CCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGCTAGCCCCTCAGCTCTaGATCAGGAGAGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGLAPQL*IRRVSR
Trigger: CCTGCTGACTCTCCTGATCCAGAGCTGAGGGGCTAG...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGTAGGACTGAGAGCTaGGTCCTGGAAGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRGRTES*VLEGSW
Trigger: CCAGGAGCCTTCCAGGACTCAGCTCTCAGTCCTACC...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGCGTCCCATTCGTCATaGAACAGTGAGCAGCGGAGA +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRASHSS*NSEQRR
Trigger: TCTCCGCTGCTCACTGTTTCATGACGAATGGGACGC...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGGCGTCCCATTCGTCATaGAACAGTGAGCAGCGGAGA +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGASHSS*NSEQRR
Trigger: TCTCCGCTGCTCACTGTTTCATGACGAATGGGACGC...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp CAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGCAGCAGGCGGTGCCGTaGACGAAGCGGTGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: QNSPGTEAQLARAAAISVQQAVP*TKRCEA
Trigger: CGCCTCACACCGCTTCGTGCACGGCACCGCCTGCTG...CACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR GCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGAGAGGCAGAGGATCTaGCTCCTGGACGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRERQRI*LLDVSP
Trigger: TGGGGAGACGTCCAGGAGGCAGATCCTCTGCCTCTC...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAAAAGCTGGTGATTCCTaGCTGGAACCAGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRKAGDS*LEPAAA
Trigger: GGCGGCCGCTGGTTCCAGGCAGGAATCACCAGCTTT...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGAAGGCCACAGGCACCATaGTCTGTGTGTGGGGGACAA +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGRPQAP*SVCGGQ
Trigger: TTGTCCCCCACACACAGAGCATGGTGCCTGTGGCCT...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp CTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGCCCGGGCACTGAGGCCCAGCCACATGCACCTCTaGCAGCCAGGGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: LPPPPRIPGFKIARALRPSHMHL*QPGPQD
Trigger: GTCCTGTGGCCCTGGCTGGCAGAGGTGCATGTGGCT...GGGCCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGAGGGAGCTGGCCCCTaGCCGGCCCAGATACACTTC +
Preference number: 4 (lower is better)
Translates to: NSPGTEAQLARAAAISVGEGAGP*PAQIHF
Trigger: GAAGTGTATCTGGGCCGGGCAGGGGCCAGCTCCCTC...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR GCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGAGCAGGAAGTAGACTaGATGCGGGGATCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSREQEVD*MRGSRG
Trigger: GCCTCGGGATCCCCGCATGCAGTCTACTTCCTGCTC...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAAGAAGGGGGAAGTGGTaGTGGGACCCTAGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRRRGKW*WDPSPS
Trigger: TGAGGGGCTAGGGTCCCAGCACCACTTCCCCCTTCT...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGATGTGGCCACCTCCATaGTGCAGGCTCACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGMWPPP*CRLTCQ
Trigger: TTGGCAAGTGAGCCTGCACCATGGAGGTGGCCACAT...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GTTCAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGTGGCCGGCACCACGATaGCGGCCACTGCGCGGGTGT +
Preference number: 4 (lower is better)
Translates to: VQNSPGTEAQLARAAAISWPAPR*RPLRGC
Trigger: ACACCCGCGCAGTGGCCGCCATCGTGGTGCCGGCCA...CGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCAAGAGGATCTGCCTCCTaGACGTCTCCCCAGCCGGTG +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPRGSAS*TSPQPV
Trigger: CACCGGCTGGGGAGACGTCCAGGAGGCAGATCCTCT...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGAGAGACATTGACAGGTaGCCTCGCCCAGCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGRDIDR*PRPAAL
Trigger: TAAGGCTGCTGGGCGAGGCCACCTGTCAATGTCTCT...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGCACATGGCTGATCCATaGGCCATGAGTCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGHMADP*AMSLQR
Trigger: CCTCTGCAGACTCATGGCCCATGGATCAGCCATGTG...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCAAAGCGGGATACCTGGTaGCCCTGTGGGAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPKRDTW*PCGREL
Trigger: CAGCTCCCTCCCACAGGGCCACCAGGTATCCCGCTT...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR CCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAACAGGGACTCGGTCCTaGGGTTCTTTCCAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGTGTRS*GSFQPN
Trigger: GTTGGGCTGGAAAGAACCCCAGGACCGAGTCCCTGT...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCAGACCCTTCCGTCATCTaGCACAGGAGGGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPDPSVI*HRRGGA
Trigger: AGCACCGCCCCTCCTGTGCCAGATGACGGAAGGGTC...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGACCCTTCCGTCATCTaGCACAGGAGGGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALEDPSVI*HRRGGA
Trigger: AGCACCGCCCCTCCTGTGCCAGATGACGGAAGGGTC...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GGGAAGTGGTGCTGGGACCCTAGCCCCTCAGCTCTGGATCAGGAGAGTCAGCAGGACCCTTCCGTCATCTaGCACAGGAGGGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: GKWCWDPSPSALDQESQQDPSVI*HRRGGA
Trigger: AGCACCGCCCCTCCTGTGCCAGATGACGGAAGGGTC...CTGCTGACTCTCCTGATCCAGAGCTGAGGGGCTAGGGTCCCAGCACCACTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR CCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGAGCCTCTCCCACTGTCTaGGAGATCCAGGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGASPTV*EIQASS
Trigger: TGAAGAGGCCTGGATCTCCCAGACAGTGGGAGAGGC...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGACTAGCCCCTCAGCTCTaGATCAGGAGAGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGLAPQL*IRRVSR
Trigger: CCTGCTGACTCTCCTGATCCAGAGCTGAGGGGCTAG...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGAGGGGGAAGTGGTGCTaGGACCCTAGCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALERGKWC*DPSPSA
Trigger: AGCTGAGGGGCTAGGGTCCCAGCACCACTTCCCCCT...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCAAGGGGGAAGTGGTGCTaGGACCCTAGCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPRGKWC*DPSPSA
Trigger: AGCTGAGGGGCTAGGGTCCCAGCACCACTTCCCCCT...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGGTAGGACTGAGAGCTaGGTCCTGGAAGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALEGRTES*VLEGSW
Trigger: CCAGGAGCCTTCCAGGACTCAGCTCTCAGTCCTACC...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGACAAAGCCAAAGCTGGTaGTTCCTGCCTGGAACCAGC +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGQSQSW*FLPGTS
Trigger: GCTGGTTCCAGGCAGGAATCACCAGCTTTGGCTTTG...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGACTGCTCCCGTATCCATaGCTCATAGGTAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGLLPYP*LIGSHS
Trigger: GCTGTGGCTACCTATGAGGCATGGATACGGGAGCAG...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGAAAGCAGCTGGCAGGTaGCAAGACCCAGCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRKAAGR*QDPAFR
Trigger: TCTGAAAGCTGGGTCTTGGCACCTGCCAGCTGCTTT...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp CAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGTCAGGTTCACGGGCGTaGGCAGCTGCAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: QNSPGTEAQLARAAAISVSGSRA*AAAAAP
Trigger: TGGCGCTGCTGCAGCTGCGCACGCCCGTGAACCTGA...CACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR GCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGATTCCAGGGGGCAGGATaGCCTGATAGAGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRFQGAG*PDRGSH
Trigger: GTGACTGCCTCTATCAGGGCATCCTGCCCCCTGGAA...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR GCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGATCCCTTGAACAGCCATaGCCACGAGGATCCAGGACC +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRSLEQP*PRGSRT
Trigger: GGTCCTGGATCCTCGTGGGCATGGCTGTTCAAGGGA...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp CCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGCCCGGGCACTGAGGCCCAAGGGGGCAGAGATTGCTaGCTCCAGTGGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PTTPKDSWVQNSPGTEAQGGRDC*LQWASV
Trigger: CACACTGGCCCACTGGAGGCAGCAATCTCTGCCCCC...TTGGGCCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp GGAGATCCAGGCCTCTTCAGGACCAATGGCAGCAAACAGCTCCCGGCTCCCTTGGGGGGCAGAGATTGCTaGCTCCAGTGGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GDPGLFRTNGSKQLPAPLGGRDC*LQWASV
Trigger: CACACTGGCCCACTGGAGGCAGCAATCTCTGCCCCC...CAAGGGAGCCGGGAGCTGTTTGCTGCCATTGGTCCTGAAGAGGCCTGGATCTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR GCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGATTAGCCAGAGCCGCTaGAATCTCGGTGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALEISQSR*NLGGWG
Trigger: GCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAAT...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCAATTAGCCAGAGCCGCTaGAATCTCGGTGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPISQSR*NLGGWG
Trigger: GCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAAT...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp CCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGCCCGGGCACTGAGGCCCAACCACTTGGCTGTAGTTaGCCGGCACCACGATGGCGG +
Preference number: 4 (lower is better)
Translates to: PTTPKDSWVQNSPGTEAQPLGCS*PAPRWR
Trigger: CCGCCATCGTGGTGCCGGCCAACTACAGCCAAGTGG...TTGGGCCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAAGCACACAGCATCCCTaGCAATATCTGGAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: GPLRFQPAGPHSSPTGRESTQHP*QYLESE
Trigger: CTCACTCTCCAGATATTGCCAGGGATGCTGTGTGCT...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGTCCCTGCGGCCCTCTaGGTAGCCAGCACACAGCAT +
Preference number: 4 (lower is better)
Translates to: NSPGTEAQLARAAAISVGVPAAL*VASTQH
Trigger: ATGCTGTGTGCTGGCTACCCAGAGGGCCGCAGGGAC...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR CCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCATCCTGGGGATCTGACTaGGTCTTCTGGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPSWGSD*VFWGWV
Trigger: CACCCAGCCCCAGAAGACCCAGTCAGATCCCCAGGA...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCATCCTCCCTGGGCTCCTaGGGATCTGACTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPSSLGS*GSDWVF
Trigger: GAAGACCCAGTCAGATCCCCAGGAGCCCAGGGAGGA...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGCAGGTCCCCTCCTCCTaGCACAAAAGGCTCCAACGC +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALEQVPSS*HKRLQR
Trigger: GCGTTGGAGCCTTTTGTGCCAGGAGGAGGGGACCTG...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGACACATGGCTGATCCATaGGCCATGAGTCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGHMADP*AMSLQR
Trigger: CCTCTGCAGACTCATGGCCCATGGATCAGCCATGTG...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGCACTGTTGTAGAGCCTaGCCTGAGGACACAGTGAGT +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRHCCRA*PEDTVS
Trigger: ACTCACTGTGTCCTCAGGCCAGGCTCTACAACAGTG...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGACCTCTTCAGGACCAATaGCAGCAAACAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRPLQDQ*QQTAPG
Trigger: GCCGGGAGCTGTTTGCTGCCATTGGTCCTGAAGAGG...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp TCAGGAGAGTCAGCAGGAGCAGGAAGTAGACTGCATGCGGGGATCCCGAGGCCTGATTGCTGCCTCCAGTaGGCCAGTGTGGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SGESAGAGSRLHAGIPRPDCCLQ*ASVGSH
Trigger: GTGGCTCCCCACACTGGCCCACTGGAGGCAGCAATC...AGGCCTCGGGATCCCCGCATGCAGTCTACTTCCTGCTCCTGCTGACTCTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR CCA 90 bp CCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGCCCGGGCACTGAGGCCCAAAGGGGGAAGTGGTGCTaGGACCCTAGCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PTTPKDSWVQNSPGTEAQRGKWC*DPSPSA
Trigger: AGCTGAGGGGCTAGGGTCCCAGCACCACTTCCCCCT...TTGGGCCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp GATCAGGAGAGTCAGCAGGAGCAGGAAGTAGACTGCATGCGGGGATCCCGAGGCAGGGGGAAGTGGTGCTaGGACCCTAGCCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: DQESQQEQEVDCMRGSRGRGKWC*DPSPSA
Trigger: AGCTGAGGGGCTAGGGTCCCAGCACCACTTCCCCCT...GCCTCGGGATCCCCGCATGCAGTCTACTTCCTGCTCCTGCTGACTCTCCTGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR CCA 90 bp GGAGATCCAGGCCTCTTCAGGACCAATGGCAGCAAACAGCTCCCGGCTCCCTTGTGGAGAAGGGGGAAGTaGTGCTGGGACCCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: GDPGLFRTNGSKQLPAPLWRRGK*CWDPSP
Trigger: GGGGCTAGGGTCCCAGCACCACTTCCCCCTTCTCCA...CAAGGGAGCCGGGAGCTGTTTGCTGCCATTGGTCCTGAAGAGGCCTGGATCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR CCA 90 bp CTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGCCCGGGCACTGAGGCCCACATTCCAGCCCCACTaGGCGGGAAGTAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LPPPPRIPGFKIARALRPTFQPH*AGSRGW
Trigger: CCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGT...GGGCCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp AGGATCCAGGACCCTTCCGTCATCTGGCACAGGAGGGGCGGTGCTGAGGTCATCACATTCCAGCCCCACTaGGCGGGAAGTAGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RIQDPSVIWHRRGGAEVITFQPH*AGSRGW
Trigger: CCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGT...GATGACCTCAGCACCGCCCCTCCTGTGCCAGATGACGGAAGGGTCCTGGATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR CCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAACCCCCAAGGATTCCTaGGTTCAAAATAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGTPKDS*VQNSPG
Trigger: GCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGT...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR TCA 90 bp CTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGCCCGGGCACTGAGGGGTAGGACTGAGAGCTaGGTCCTGGAAGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLPPPPRIPGFKIARALRGRTES*VLEGSW
Trigger: CCAGGAGCCTTCCAGGACTCAGCTCTCAGTCCTACC...CCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR TCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGACACTGGGAAAGTCTCTaGTTCCAGCCAGAAACCAGG +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGHWESL*FQPETR
Trigger: CCTGGTTTCTGGCTGGAATCAGAGACTTTCCCAGTG...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGACACTGGGAAAGTCTCTaGTTCCAGCCAGAAACCAGG +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGHWESL*FQPETR
Trigger: CCTGGTTTCTGGCTGGAATCAGAGACTTTCCCAGTG...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGACTGATCCATGGGCCATaGGTCTGCAGAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRLIHGP*VCRGKK
Trigger: CTTCTTCCCTCTGCAGACTCATGGCCCATGGATCAG...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCACCCGAGTCACATGGCTaGTCCATGGGCCATGAGTCT +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPPESHG*SMGHES
Trigger: AGACTCATGGCCCATGGATCAGCCATGTGACTCGGG...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTCAGGAGGGGCGGTGCTaGGGTCATCTCACACCTGTT +
Preference number: 4 (lower is better)
Translates to: NSPGTEAQLARAAAISVGQEGRC*GHLTPV
Trigger: AACAGGTGTGAGATGACCTCAGCACCGCCCCTCCTG...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR TCA 90 bp AGGGGCGGTGCTGAGGTCATCTCACACCTGTTCTCCTGCCCCTCTGCATACAGGCAGGAGGGGCGGTGCTaGGGTCATCTCACACCTGTT +
Preference number: 4 (lower is better)
Translates to: RGGAEVISHLFSCPSAYRQEGRC*GHLTPV
Trigger: AACAGGTGTGAGATGACCTCAGCACCGCCCCTCCTG...CCTGTATGCAGAGGGGCAGGAGAACAGGTGTGAGATGACCTCAGCACCGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR GCA 90 bp CTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGCCCGGGCACTGAGGGAGAGGCAGAGGATCTaGCTCCTGGACGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LLPPPPRIPGFKIARALRERQRI*LLDVSP
Trigger: TGGGGAGACGTCCAGGAGGCAGATCCTCTGCCTCTC...CCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGACTGCTCCCGTATCCATaGCTCATAGGTAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRLLPYP*LIGSHS
Trigger: GCTGTGGCTACCTATGAGGCATGGATACGGGAGCAG...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp GCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGGGGATCACACCTGTTCTCCTaGCCCTCTGCATACAGGACA +
Preference number: 4 (lower is better)
Translates to: AGPHSSPTGREVEGGEGGSHLFS*PSAYRT
Trigger: TGTCCTGTATGCAGAGGGGCAGGAGAACAGGTGTGA...TCCCCCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR GCA 90 bp GGAGAGTCAGCAGGAGCAGGAAGTAGACTGCATGCGGGGATCCCGAGGCCTTGGTCCCTTGAACAGCCATaGCCACGAGGATCCAGGACC +
Preference number: 4 (lower is better)
Translates to: GESAGAGSRLHAGIPRPWSLEQP*PRGSRT
Trigger: GGTCCTGGATCCTCGTGGGCATGGCTGTTCAAGGGA...CCAAGGCCTCGGGATCCCCGCATGCAGTCTACTTCCTGCTCCTGCTGACTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR GCA 90 bp CAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGGGGCAGAGATTGCTaGCTCCAGTGGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: QNSPGTEAQLARAAAISVGGRDC*LQWASV
Trigger: CACACTGGCCCACTGGAGGCAGCAATCTCTGCCCCC...CACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR GCA 90 bp CCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGCCCGGGCACTGAGGCCCAAGAGCAGGAAGTAGACTaGATGCGGGGATCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PTTPKDSWVQNSPGTEAQEQEVD*MRGSRG
Trigger: GCCTCGGGATCCCCGCATGCAGTCTACTTCCTGCTC...TTGGGCCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGAGCAGGAAGTAGACTaGATGCGGGGATCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: NSPGTEAQLARAAAISVGEQEVD*MRGSRG
Trigger: GCCTCGGGATCCCCGCATGCAGTCTACTTCCTGCTC...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR GCA 90 bp AGGGGCGGTGCTGAGGTCATCTCACACCTGTTCTCCTGCCCCTCTGCATACAGGGAGCAGGAAGTAGACTaGATGCGGGGATCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: RGGAEVISHLFSCPSAYREQEVD*MRGSRG
Trigger: GCCTCGGGATCCCCGCATGCAGTCTACTTCCTGCTC...CCTGTATGCAGAGGGGCAGGAGAACAGGTGTGAGATGACCTCAGCACCGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR CCA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGTCCTGGAAGGCTCCTaGGATGGGACTGATGACAAG +
Preference number: 4 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRVLEGS*DGTDDK
Trigger: CTTGTCATCAGTCCCATCCCAGGAGCCTTCCAGGAC...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGAGCACACAGCATCCCTaGCAATATCTGGAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRSTQHP*QYLESE
Trigger: CTCACTCTCCAGATATTGCCAGGGATGCTGTGTGCT...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGTGCAGTTCTCCTCCCTaGGCTCCTGGGGATCTGACT +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALECSSPP*APGDLT
Trigger: AGTCAGATCCCCAGGAGCCCAGGGAGGAGAACTGCA...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGTCCAGAAAGCAGCTaGCAGGTGCCAAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: NSPGTEAQLARAAAISVGGPESS*QVPRPS
Trigger: GCTGGGTCTTGGCACCTGCCAGCTGCTTTCTGGACC...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR CCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAACCATGCTCTGTGTGTaGGGGACAAGTCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGTMLCV*GTSLCL
Trigger: GAGACACAGACTTGTCCCCCACACACAGAGCATGGT...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGACACTGTTGTAGAGCCTaGCCTGAGGACACAGTGAGT +
Preference number: 4 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGHCCRA*PEDTVS
Trigger: ACTCACTGTGTCCTCAGGCCAGGCTCTACAACAGTG...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp CAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGCTGAGTCCCAGGTGCTaGGGCAGCCGGATGCTGATG +
Preference number: 4 (lower is better)
Translates to: QNSPGTEAQLARAAAISVLSPRC*GSRMLM
Trigger: CATCAGCATCCGGCTGCCCCAGCACCTGGGACTCAG...CACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGCCTCTTCAGGACCAATaGCAGCAAACAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALEPLQDQ*QQTAPG
Trigger: GCCGGGAGCTGTTTGCTGCCATTGGTCCTGAAGAGG...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp CTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGCCCGGGCACTGAGGCCCGCCTCTCCCACTGTCTaGGAGATCCAGGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LPPPPRIPGFKIARALRPASPTV*EIQASS
Trigger: TGAAGAGGCCTGGATCTCCCAGACAGTGGGAGAGGC...GGGCCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCAGCCTCTCCCACTGTCTaGGAGATCCAGGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPASPTV*EIQASS
Trigger: TGAAGAGGCCTGGATCTCCCAGACAGTGGGAGAGGC...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CCA 90 bp CAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGCCTTGGCCAGTTCTaGGGGGCAGAGATTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QNSPGTEAQLARAAAISVGLGQF*GAEIAA
Trigger: GGCAGCAATCTCTGCCCCCCAGAACTGGCCAAGGCC...CACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR CCA 90 bp GCTGAGGTCATCTCACACCTGTTCTCCTGCCCCTCTGCATACAGGACACAGAGGAGCAGCCACAGGGACTaGTGGCCCTGTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AEVISHLFSCPSAYRTQRSSHRD*WPCGRE
Trigger: CTCCCTCCCACAGGGCCACCAGTCCCTGTGGCTGCT...CCTCTGTGTCCTGTATGCAGAGGGGCAGGAGAACAGGTGTGAGATGACCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR TCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCATTCGTCATGAAACAGTaGGCAGCGGAGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPFVMKQ*AAERTQ
Trigger: CTGGGTCCTCTCCGCTGCTCACTGTTTCATGACGAA...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGCGTCCCATTCGTCATaGAACAGTGAGCAGCGGAGA +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALEASHSS*NSEQRR
Trigger: TCTCCGCTGCTCACTGTTTCATGACGAATGGGACGC...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR TCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCACAAAGCCAAAGCTGGTaGTTCCTGCCTGGAACCAGC +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPQSQSW*FLPGTS
Trigger: GCTGGTTCCAGGCAGGAATCACCAGCTTTGGCTTTG...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp CAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGTGGCCACCTCCATGGTaGAGGCTCACTTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: QNSPGTEAQLARAAAISVWPPPW*RLTCQG
Trigger: GCCTTGGCAAGTGAGCCTGCACCATGGAGGTGGCCA...CACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR GCA 90 bp TGTGTTTACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTGGCCCAGCAGGCGGTaGCGTGCACGAAGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: CVYTFIVRSSHHPQGFLGWPSRR*RARSGV
Trigger: CACACCGCTTCGTGCACGGCACCGCCTGCTGGGCCA...ACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTAAACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp CAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGCCCCATGGCAGGGTCTaGATCCTGGCACCATCACCT +
Preference number: 4 (lower is better)
Translates to: QNSPGTEAQLARAAAISVPHGRV*ILAPSP
Trigger: AGGTGATGGTGCCAGGATCCAGACCCTGCCATGGGG...CACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR CCA 90 bp AGGGGCGGTGCTGAGGTCATCTCACACCTGTTCTCCTGCCCCTCTGCATACAGGCCTCTTCAGGACCAATaGCAGCAAACAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: RGGAEVISHLFSCPSAYRPLQDQ*QQTAPG
Trigger: GCCGGGAGCTGTTTGCTGCCATTGGTCCTGAAGAGG...CCTGTATGCAGAGGGGCAGGAGAACAGGTGTGAGATGACCTCAGCACCGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR TCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGCACTGGGAAAGTCTCTaGTTCCAGCCAGAAACCAGG +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALEHWESL*FQPETR
Trigger: CCTGGTTTCTGGCTGGAATCAGAGACTTTCCCAGTG...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTCTGCTCCCGTATCCATaGCTCATAGGTAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: NSPGTEAQLARAAAISVGLLPYP*LIGSHS
Trigger: GCTGTGGCTACCTATGAGGCATGGATACGGGAGCAG...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR GCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCATCTGAACCCATCACCTaGTCCCGTATCCATGCCTCA +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPSEPIT*SRIHAS
Trigger: TGAGGCATGGATACGGGAGCAGGTGATGGGTTCAGA...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGTCTGAACCCATCACCTaGTCCCGTATCCATGCCTCA +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALESEPIT*SRIHAS
Trigger: TGAGGCATGGATACGGGAGCAGGTGATGGGTTCAGA...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGAAAGCAGCTGGCAGGTaGCAAGACCCAGCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: TEAQLARAAAISVGGALEKAAGR*QDPAFR
Trigger: TCTGAAAGCTGGGTCTTGGCACCTGCCAGCTGCTTT...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR GCA 90 bp TGTGTTTACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTCACGAAGCGTTCTCGTaGTGCACCAGGCGCGCCACC +
Preference number: 4 (lower is better)
Translates to: CVYTFIVRSSHHPQGFLGHEAFS*CTRRAT
Trigger: GGTGGCGCGCCTGGTGCAGCACGAGAACGCTTCGTG...ACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTAAACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp GCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGGTTCCATCACACCTGTTCTCCTaGCCCTCTGCATACAGGACA +
Preference number: 4 (lower is better)
Translates to: AQLARAAAISVGGALEVPSHLFS*PSAYRT
Trigger: TGTCCTGTATGCAGAGGGGCAGGAGAACAGGTGTGA...TGGAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR GCA 90 bp GTTCAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGAGAAGGGGGAAGTGGTaGTGGGACCCTAGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: VQNSPGTEAQLARAAAISRRGKW*WDPSPS
Trigger: TGAGGGGCTAGGGTCCCAGCACCACTTCCCCCTTCT...CGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp GCTGAGGTCATCTCACACCTGTTCTCCTGCCCCTCTGCATACAGGACACAGAGGAGAAGGGGGAAGTGGTaGTGGGACCCTAGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: AEVISHLFSCPSAYRTQRRRGKW*WDPSPS
Trigger: TGAGGGGCTAGGGTCCCAGCACCACTTCCCCCTTCT...CCTCTGTGTCCTGTATGCAGAGGGGCAGGAGAACAGGTGTGAGATGACCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR CCA 90 bp CACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGTCGAGGTCGCGGGGTaGGCTGTCGGAGCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: HLYCPLLPPPPRIPGFKIVEVAG*AVGAVR
Trigger: CCGAACAGCTCCGACAGCCCACCCCGCGACCTCGAC...TATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp CAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGCCTCTTCAGGACCAATaGCAGCAAACAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: QNSPGTEAQLARAAAISVPLQDQ*QQTAPG
Trigger: GCCGGGAGCTGTTTGCTGCCATTGGTCCTGAAGAGG...CACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR CCA 90 bp GCGGTGCTGAGGTCATCTCACACCTGTTCTCCTGCCCCTCTGCATACAGGACACGCCTCTCCCACTGTCTaGGAGATCCAGGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: AVLRSSHTCSPAPLHTGHASPTV*EIQASS
Trigger: TGAAGAGGCCTGGATCTCCCAGACAGTGGGAGAGGC...GTGTCCTGTATGCAGAGGGGCAGGAGAACAGGTGTGAGATGACCTCAGCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR CCA 90 bp GCGGTGCTGAGGTCATCTCACACCTGTTCTCCTGCCCCTCTGCATACAGGACACCTAGCCCCTCAGCTCTaGATCAGGAGAGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AVLRSSHTCSPAPLHTGHLAPQL*IRRVSR
Trigger: CCTGCTGACTCTCCTGATCCAGAGCTGAGGGGCTAG...GTGTCCTGTATGCAGAGGGGCAGGAGAACAGGTGTGAGATGACCTCAGCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR CCA 90 bp TGTGTTTACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTGAGGTTCCAGCCGGCTaGGCCACATTCCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: CVYTFIVRSSHHPQGFLGEVPAG*ATFQPH
Trigger: GTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC...ACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTAAACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR TCA 90 bp TACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAAGGCCTGAGGACACAGTaGGTGGCTGCCAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: YTFIVRSSHHPQGFLGSKGLRTQ*VAARTQ
Trigger: CTGGGTCCTGGCAGCCACTCACTGTGTCCTCAGGCC...TTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp CACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATATGGTGCAGGCTCACTTaGCAAGGCCAGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: HLYCPLLPPPPRIPGFKIWCRLT*QGQVPG
Trigger: GCCGGGCACCTGGCCTTGGCAAGTGAGCCTGCACCA...TATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp CACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATATCAGGTTCACGGGCGTaGGCAGCTGCAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: HLYCPLLPPPPRIPGFKISGSRA*AAAAAP
Trigger: TGGCGCTGCTGCAGCTGCGCACGCCCGTGAACCTGA...TATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp GGTGCTGAGGTCATCTCACACCTGTTCTCCTGCCCCTCTGCATACAGGACACAGTTCCAGGGGGCAGGATaGCCTGATAGAGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GAEVISHLFSCPSAYRTQFQGAG*PDRGSH
Trigger: GTGACTGCCTCTATCAGGGCATCCTGCCCCCTGGAA...CTGTGTCCTGTATGCAGAGGGGCAGGAGAACAGGTGTGAGATGACCTCAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR GCA 90 bp AGAAGGGGGAAGTGGTGCTGGGACCCTAGCCCCTCAGCTCTGGATCAGGAGAGTTCACACCTGTTCTCCTaGCCCTCTGCATACAGGACA +
Preference number: 4 (lower is better)
Translates to: RRGKWCWDPSPSALDQESSHLFS*PSAYRT
Trigger: TGTCCTGTATGCAGAGGGGCAGGAGAACAGGTGTGA...ACTCTCCTGATCCAGAGCTGAGGGGCTAGGGTCCCAGCACCACTTCCCCCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR CCA 90 bp TGTGTTTACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTGTCCCTGCGGCCCTCTaGGTAGCCAGCACACAGCAT +
Preference number: 4 (lower is better)
Translates to: CVYTFIVRSSHHPQGFLGVPAAL*VASTQH
Trigger: ATGCTGTGTGCTGGCTACCCAGAGGGCCGCAGGGAC...ACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTAAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTACCATGCTCTGTGTGTaGGGGACAAGTCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: NSPGTEAQLARAAAISVGTMLCV*GTSLCL
Trigger: GAGACACAGACTTGTCCCCCACACACAGAGCATGGT...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR CCA 90 bp CACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATATGCCAGGACCCAGCCTaGGGCCAGGAGGATCCCAGT +
Preference number: 4 (lower is better)
Translates to: HLYCPLLPPPPRIPGFKICQDPA*GQEDPS
Trigger: ACTGGGATCCTCCTGGCCCCAGGCTGGGTCCTGGCA...TATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp TACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAAGGGATACCCGCCGGGTaGAGACAGATGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: YTFIVRSSHHPQGFLGSKGIPAG*RQMGRA
Trigger: AGCCCTGCCCATCTGTCTCCACCCGGCGGGTATCCC...TTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp TGTGTTTACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTGACCCTTCCGTCATCTaGCACAGGAGGGGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: CVYTFIVRSSHHPQGFLGDPSVI*HRRGGA
Trigger: AGCACCGCCCCTCCTGTGCCAGATGACGGAAGGGTC...ACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTAAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp GTTCAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGCTAGCCCCTCAGCTCTaGATCAGGAGAGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VQNSPGTEAQLARAAAISLAPQL*IRRVSR
Trigger: CCTGCTGACTCTCCTGATCCAGAGCTGAGGGGCTAG...CGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp TGTGTTTACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTGGCCACCTCCATGGTaGAGGCTCACTTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: CVYTFIVRSSHHPQGFLGWPPPW*RLTCQG
Trigger: GCCTTGGCAAGTGAGCCTGCACCATGGAGGTGGCCA...ACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTAAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp CAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGAAAGCAGCTGGCAGGTaGCAAGACCCAGCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: QNSPGTEAQLARAAAISVKAAGR*QDPAFR
Trigger: TCTGAAAGCTGGGTCTTGGCACCTGCCAGCTGCTTT...CACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS-3UTR CCA 90 bp TGTGTTTACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTCAGGTCCCCTCCTCCTaGCACAAAAGGCTCCAACGC +
Preference number: 4 (lower is better)
Translates to: CVYTFIVRSSHHPQGFLGQVPSS*HKRLQR
Trigger: GCGTTGGAGCCTTTTGTGCCAGGAGGAGGGGACCTG...ACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTAAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp TACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAACCGCTGCAATCTCGGTaGGTGGGGCCCTTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: YTFIVRSSHHPQGFLGSKPLQSR*VGPLRF
Trigger: GAACCTCAAGGGCCCCACCCACCGAGATTGCAGCGG...TTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp GTTCAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGTCTGAACCCATCACCTaGTCCCGTATCCATGCCTCA +
Preference number: 4 (lower is better)
Translates to: VQNSPGTEAQLARAAAISSEPIT*SRIHAS
Trigger: TGAGGCATGGATACGGGAGCAGGTGATGGGTTCAGA...CGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp TGTGTTTACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTCCAGGAGGATCCCAGTaGAGACTCGATCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: CVYTFIVRSSHHPQGFLGPGGSQ*RLDHQP
Trigger: TGGCTGGTGATCGAGTCTGCACTGGGATCCTCCTGG...ACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTAAACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp CACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATATCCTCCCTGGGCTCCTaGGGATCTGACTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: HLYCPLLPPPPRIPGFKISSLGS*GSDWVF
Trigger: GAAGACCCAGTCAGATCCCCAGGAGCCCAGGGAGGA...TATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp TACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAAGGTCCAGAAAGCAGCTaGCAGGTGCCAAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: YTFIVRSSHHPQGFLGSKGPESS*QVPRPS
Trigger: GCTGGGTCTTGGCACCTGCCAGCTGCTTTCTGGACC...TTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR TCA 90 bp TGTGTTTACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTCTGATCCATGGGCCATaGGTCTGCAGAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: CVYTFIVRSSHHPQGFLGLIHGP*VCRGKK
Trigger: CTTCTTCCCTCTGCAGACTCATGGCCCATGGATCAG...ACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTAAACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR GCA 90 bp CACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATAAGGCCACAGGCACCATaGTCTGTGTGTGGGGGACAA +
Preference number: 4 (lower is better)
Translates to: HLYCPLLPPPPRIPGFKIRPQAP*SVCGGQ
Trigger: TTGTCCCCCACACACAGAGCATGGTGCCTGTGGCCT...TATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp CACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATATGCAGTTCTCCTCCCTaGGCTCCTGGGGATCTGACT +
Preference number: 4 (lower is better)
Translates to: HLYCPLLPPPPRIPGFKICSSPP*APGDLT
Trigger: AGTCAGATCCCCAGGAGCCCAGGGAGGAGAACTGCA...TATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp CACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATAATGTGGCCACCTCCATaGTGCAGGCTCACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: HLYCPLLPPPPRIPGFKIMWPPP*CRLTCQ
Trigger: TTGGCAAGTGAGCCTGCACCATGGAGGTGGCCACAT...TATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp CACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAATAAGAGACATTGACAGGTaGCCTCGCCCAGCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: HLYCPLLPPPPRIPGFKIRDIDR*PRPAAL
Trigger: TAAGGCTGCTGGGCGAGGCCACCTGTCAATGTCTCT...TATTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CCA 90 bp TGTGTTTACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTACCATGCTCTGTGTGTaGGGGACAAGTCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: CVYTFIVRSSHHPQGFLGTMLCV*GTSLCL
Trigger: GAGACACAGACTTGTCCCCCACACACAGAGCATGGT...ACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTAAACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS GCA 90 bp GCCACTGCGCGGGTGTGCGCGCCGTCCAGGGGCCCGTCCTGGGAGTaGACGCCCAGCAGTACCGACCACTCGGCCGCGGGCTCCAGCGTC +
Preference number: 5 (lower is better)
Translates to: ATARVCAPSRGPSWE*TPSSTDHSAAGSSV
Trigger: GACGCTGGAGCCCGCGGCCGAGTGGTCGGTACTGCTGGGCGTGCACTCCCAGGACGGGCCCCTGGACGGCGCGCACACCCGCGCAGTGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
ENST00000569614.1
CDS GCA 90 bp GTAGGCAGGGCAGAGCGCGTGCGGCGGGTCTCCGGGCAGCGGTACTaGCGCCCCCTGGCGGCCGTACAGGCAGTGGCACCACCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: VGRAERVRRVSGQRY*RPLAAVQAVAPPAA
Trigger: GGCGGCTGGTGGTGCCACTGCCTGTACGGCCGCCAGGGGGCGGCAGTACCGCTGCCCGGAGACCCGCCGCACGCGCTCTGCCCTGCCTAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000563693.1
ENST00000569305.1
CDS CCA 90 bp ATGGCGGCCACTGCGCGGGTGTGCGCGCCGTCCAGGGGCCCGTCCTaGGAGTGCACGCCCAGCAGTACCGACCACTCGGCCGCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: MAATARVCAPSRGPS*ECTPSSTDHSAAGS
Trigger: GGAGCCCGCGGCCGAGTGGTCGGTACTGCTGGGCGTGCACTCCCAGGACGGGCCCCTGGACGGCGCGCACACCCGCGCAGTGGCCGCCAT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
ENST00000569614.1
CDS GCA 90 bp AGCAGCGCCAGGTCCGAGGCGTTGTCCCACGAAGCGTTCTCGTGCTaGACCAGGCGCGCCACCCGCTCCGCGCGCGGGCGCGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SSARSEALSHEAFSC*TRRATRSARGREGS
Trigger: GCTGCCCTCGCGCCCGCGCGCGGAGCGGGTGGCGCGCCTGGTGCAGCACGAGAACGCTTCGTGGGACAACGCCTCGGACCTGGCGCTGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS GCA 90 bp TGCAGCAGCGCCAGGTCCGAGGCGTTGTCCCACGAAGCGTTCTCGTaGTGCACCAGGCGCGCCACCCGCTCCGCGCGCGGGCGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: CSSARSEALSHEAFS*CTRRATRSARGREG
Trigger: GCCCTCGCGCCCGCGCGCGGAGCGGGTGGCGCGCCTGGTGCAGCACGAGAACGCTTCGTGGGACAACGCCTCGGACCTGGCGCTGCTGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS CCA 90 bp GGTCGGCGCCCAGCTCCACTTGGCTGTAGTTGGCCGGCACCACGATaGCGGCCACTGCGCGGGTGTGCGCGCCGTCCAGGGGCCCGTCCT +
Preference number: 5 (lower is better)
Translates to: GRRPAPLGCSWPAPR*RPLRGCARRPGARP
Trigger: AGGACGGGCCCCTGGACGGCGCGCACACCCGCGCAGTGGCCGCCATCGTGGTGCCGGCCAACTACAGCCAAGTGGAGCTGGGCGCCGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
ENST00000569614.1
CDS CCA 90 bp GGCGCAGCAGGGCCAGGTCGGCGCCCAGCTCCACTTGGCTGTAGTTaGCCGGCACCACGATGGCGGCCACTGCGCGGGTGTGCGCGCCGT +
Preference number: 5 (lower is better)
Translates to: GAAGPGRRPAPLGCS*PAPRWRPLRGCARR
Trigger: ACGGCGCGCACACCCGCGCAGTGGCCGCCATCGTGGTGCCGGCCAACTACAGCCAAGTGGAGCTGGGCGCCGACCTGGCCCTGCTGCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
ENST00000569614.1
CDS CCA 90 bp CAGAGCGCGTGCGGCGGGTCTCCGGGCAGCGGTACTGCCGCCCCCTaGCGGCCGTACAGGCAGTGGCACCACCAGCCGCCTAACAGCTCC +
Preference number: 5 (lower is better)
Translates to: QSACGGSPGSGTAAP*RPYRQWHHQPPNSS
Trigger: GGAGCTGTTAGGCGGCTGGTGGTGCCACTGCCTGTACGGCCGCCAGGGGGCGGCAGTACCGCTGCCCGGAGACCCGCCGCACGCGCTCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000563693.1
ENST00000569305.1
CDS GCA 90 bp GATCTGCCTCCTGGACGTCTCCCCAGCCGGTGGCCCAGCAGGCGGTaGCGTGCACGAAGCGGTGTGAGGCGCGGGGCAGGCAGACAGGCC +
Preference number: 5 (lower is better)
Translates to: DLPPGRLPSRWPSRR*RARSGVRRGAGRQA
Trigger: GGCCTGTCTGCCTGCCCCGCGCCTCACACCGCTTCGTGCACGGCACCGCCTGCTGGGCCACCGGCTGGGGAGACGTCCAGGAGGCAGATC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS CCA 90 bp TCTCCGGGCAGCGGTACTGCCGCCCCCTGGCGGCCGTACAGGCAGTaGCACCACCAGCCGCCTAACAGCTCCGCCTCCAGCAGCGCGCCT +
Preference number: 5 (lower is better)
Translates to: SPGSGTAAPWRPYRQ*HHQPPNSSASSSAP
Trigger: AGGCGCGCTGCTGGAGGCGGAGCTGTTAGGCGGCTGGTGGTGCCACTGCCTGTACGGCCGCCAGGGGGCGGCAGTACCGCTGCCCGGAGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000563693.1
ENST00000569305.1
CDS GCA 90 bp CAGCTCCACTTGGCTGTAGTTGGCCGGCACCACGATGGCGGCCACTaGGCGGGTGTGCGCGCCGTCCAGGGGCCCGTCCTGGGAGTGCAC +
Preference number: 5 (lower is better)
Translates to: QLHLAVVGRHHDGGH*AGVRAVQGPVLGVH
Trigger: GTGCACTCCCAGGACGGGCCCCTGGACGGCGCGCACACCCGCGCAGTGGCCGCCATCGTGGTGCCGGCCAACTACAGCCAAGTGGAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
ENST00000569614.1
CDS GCA 90 bp CACACGGGCCGCGAAGCCGCGCTCAGGTTCACGGGCGTGCGCAGCTaGAGCAGCGCCAGGTCCGAGGCGTTGTCCCACGAAGCGTTCTCG +
Preference number: 5 (lower is better)
Translates to: HTGREAALRFTGVRS*SSARSEALSHEAFS
Trigger: CGAGAACGCTTCGTGGGACAACGCCTCGGACCTGGCGCTGCTGCAGCTGCGCACGCCCGTGAACCTGAGCGCGGCTTCGCGGCCCGTGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS-3UTR CAA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGGCGCCCAGCTCCACTaGGCTGTAGTTGGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREGAQLH*AVVGRH
Trigger: GTGCCGGCCAACTACAGCCAAGTGGAGCTGGGCGCC...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS GCA 90 bp CCTGGGGCCAGGAGGATCCCAGTGCAGACTCGATCACCAGCCACATaGACCTCTGCCAGCCAGGGCCACAGGACCCCCACTGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: PGARRIPVQTRSPAT*TSASQGHRTPTGAA
Trigger: GGCTGCTCCAGTGGGGGTCCTGTGGCCCTGGCTGGCAGAGGTGCATGTGGCTGGTGATCGAGTCTGCACTGGGATCCTCCTGGCCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000563693.1
ENST00000569305.1
CDS CCA 90 bp ACCAGCCACATGCACCTCTGCCAGCCAGGGCCACAGGACCCCCACTaGAGCAGCCTCCAGCCGCAGGCCACAGGCACCATGCTCTGTGTG +
Preference number: 5 (lower is better)
Translates to: TSHMHLCQPGPQDPH*SSLQPQATGTMLCV
Trigger: CACACAGAGCATGGTGCCTGTGGCCTGCGGCTGGAGGCTGCTCCAGTGGGGGTCCTGTGGCCCTGGCTGGCAGAGGTGCATGTGGCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS GCA 90 bp CAGGAGGATCCCAGTGCAGACTCGATCACCAGCCACATGCACCTCTaGCAGCCAGGGCCACAGGACCCCCACTGGAGCAGCCTCCAGCCG +
Preference number: 5 (lower is better)
Translates to: QEDPSADSITSHMHL*QPGPQDPHWSSLQP
Trigger: CGGCTGGAGGCTGCTCCAGTGGGGGTCCTGTGGCCCTGGCTGGCAGAGGTGCATGTGGCTGGTGATCGAGTCTGCACTGGGATCCTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000563693.1
ENST00000569305.1
CDS CCA 90 bp CAGCTGGCAGGTGCCAAGACCCAGCTTTCAGACACCAGCGCCCCATaGCAGGGTCTGGATCCTGGCACCATCACCTGGGCCTCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: QLAGAKTQLSDTSAP*QGLDPGTITWASQG
Trigger: GCCCTGGGAGGCCCAGGTGATGGTGCCAGGATCCAGACCCTGCCATGGGGCGCTGGTGTCTGAAAGCTGGGTCTTGGCACCTGCCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS-3UTR CAA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAACTGGCTGTAGAGACATaGACAGGTGGCCTCGCCCAG +
Preference number: 5 (lower is better)
Translates to: GPLRFQPAGPHSSPTGRELAVET*TGGLAQ
Trigger: CTGGGCGAGGCCACCTGTCAATGTCTCTACAGCCAG...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CAA 90 bp GGGCCCTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAATCTGGAGAGTGAGGTaGAAGGGACCGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GPLRFQPAGPHSSPTGREIWRVR*KGPGWL
Trigger: CAGCCAGCCCGGTCCCTTCAACCTCACTCTCCAGAT...TTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CAA 90 bp TTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGCCAGGTCCGAGGCGTaGTCCCACGAAGCGTTCTCG +
Preference number: 5 (lower is better)
Translates to: FQPAGPHSSPTGREVEGGARSEA*SHEAFS
Trigger: CGAGAACGCTTCGTGGGACAACGCCTCGGACCTGGC...TCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CAA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAATGGTGCAGGCTCACTaGCCAAGGCCAGGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRMVQAH*PRPGAR
Trigger: CCGGGCACCTGGCCTTGGCAAGTGAGCCTGCACCAT...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CAA 90 bp GAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGCTGGCTGTAGAGACATaGACAGGTGGCCTCGCCCAG +
Preference number: 5 (lower is better)
Translates to: EVPAGWATFQPHWAGSRGLAVET*TGGLAQ
Trigger: CTGGGCGAGGCCACCTGTCAATGTCTCTACAGCCAG...CCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CAA 90 bp GCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGGGTGGAGAAGGATCTGGAGAGTGAGGTaGAAGGGACCGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: AGWATFQPHWAGSRGWRRIWRVR*KGPGWL
Trigger: CAGCCAGCCCGGTCCCTTCAACCTCACTCTCCAGAT...CCTTCTCCACCCTCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS CCA 90 bp GGGCAGCCGGATGCTGATGACCAAGCGGGATACCTGGTGGCCCTGTaGGAGGGAGCTGGCCCCTGCCCGGCCCAGATACACTTCAATGTA +
Preference number: 5 (lower is better)
Translates to: GQPDADDQAGYLVAL*EGAGPCPAQIHFNV
Trigger: TACATTGAAGTGTATCTGGGCCGGGCAGGGGCCAGCTCCCTCCCACAGGGCCACCAGGTATCCCGCTTGGTCATCAGCATCCGGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000562368.5
ENST00000569305.1
CDS-3UTR CAA 90 bp ACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGGGGCCCTTGAGATGGTGCAGGCTCACTaGCCAAGGCCAGGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: TEAQLARAAAISVGGALEMVQAH*PRPGAR
Trigger: CCGGGCACCTGGCCTTGGCAAGTGAGCCTGCACCAT...CTCAAGGGCCCCACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CAA 90 bp CCCACCACCCCCAAGGATTCCTGGGTTCAAAATAGCCCGGGCACTGAGGCCCAAGGCGCCCAGCTCCACTaGGCTGTAGTTGGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: PTTPKDSWVQNSPGTEAQGAQLH*AVVGRH
Trigger: GTGCCGGCCAACTACAGCCAAGTGGAGCTGGGCGCC...TTGGGCCTCAGTGCCCGGGCTATTTTGAACCCAGGAATCCTTGGGGGTGGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS TCA 90 bp CCCAGGCTAGCTGGTCCTCCAGGTAGGCTCCCCGAGTCACATGGCTaGTCCATGGGCCATGAGTCTGCAGAGGGAAGAAGGCTCGGGGAC +
Preference number: 5 (lower is better)
Translates to: PRLAGPPGRLPESHG*SMGHESAEGRRLGD
Trigger: GTCCCCGAGCCTTCTTCCCTCTGCAGACTCATGGCCCATGGATCAGCCATGTGACTCGGGGAGCCTACCTGGAGGACCAGCTAGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000563693.1
ENST00000569305.1
CDS-3UTR CAA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGACTGGCTGTAGAGACATaGACAGGTGGCCTCGCCCAG +
Preference number: 5 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRLAVET*TGGLAQ
Trigger: CTGGGCGAGGCCACCTGTCAATGTCTCTACAGCCAG...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CAA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAATCTGGAGAGTGAGGTaGAAGGGACCGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRIWRVR*KGPGWL
Trigger: CAGCCAGCCCGGTCCCTTCAACCTCACTCTCCAGAT...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS-3UTR CAA 90 bp AATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGTGGGTGCCAGGTCCGAGGCGTaGTCCCACGAAGCGTTCTCG +
Preference number: 5 (lower is better)
Translates to: NSPGTEAQLARAAAISVGARSEA*SHEAFS
Trigger: CGAGAACGCTTCGTGGGACAACGCCTCGGACCTGGC...ACCCACCGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000418068.6
CDS GCA 90 bp GACCAAGCGGGATACCTGGTGGCCCTGTGGGAGGGAGCTGGCCCCTaGCCGGCCCAGATACACTTCAATGTAAGGCACTGTTGTAGAGCC +
Preference number: 5 (lower is better)
Translates to: DQAGYLVALWEGAGP*PAQIHFNVRHCCRA
Trigger: GGCTCTACAACAGTGCCTTACATTGAAGTGTATCTGGGCCGGGCAGGGGCCAGCTCCCTCCCACAGGGCCACCAGGTATCCCGCTTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000562368.5
ENST00000569305.1
CDS GCA 90 bp AGGACACTTGTGACTTCCAGGCCTGCACCGCCCAGCCCCACTTCCTaGTCTCCAACCCCCGACCCTATCTTCCCACTTCCCTGTCCGTTC +
Preference number: 5 (lower is better)
Translates to: RTLVTSRPAPPSPTS*SPTPDPIFPLPCPF
Trigger: GAACGGACAGGGAAGTGGGAAGATAGGGTCGGGGGTTGGAGAGCAGGAAGTGGGGCTGGGCGGTGCAGGCCTGGAAGTCACAAGTGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562390.1
CDS TCA 90 bp AAACTCCAGGGCGGTTTCTCCGTCCACAGCCAAAGCCAAAGCTGGTaGTTCCTGCCTGGAACCAGCGGCCGCCTTCCTCACAGACCAGGG +
Preference number: 5 (lower is better)
Translates to: KLQGGFSVHSQSQSW*FLPGTSGRLPHRPG
Trigger: CCCTGGTCTGTGAGGAAGGCGGCCGCTGGTTCCAGGCAGGAATCACCAGCTTTGGCTTTGGCTGTGGACGGAGAAACCGCCCTGGAGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS-3UTR CAA 90 bp GTTCAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGATGGTGCAGGCTCACTaGCCAAGGCCAGGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: VQNSPGTEAQLARAAAISMVQAH*PRPGAR
Trigger: CCGGGCACCTGGCCTTGGCAAGTGAGCCTGCACCAT...CGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS CCA 90 bp CTGGGAAAGTCTCTGATTCCAGCCAGAAACCAGGTCCCCTCCTCCTaGCACAAAAGGCTCCAACGCGAGTCATTCCAGCAGCTGCCCACC +
Preference number: 5 (lower is better)
Translates to: LGKSLIPARNQVPSS*HKRLQRESFQQLPT
Trigger: GGTGGGCAGCTGCTGGAATGACTCGCGTTGGAGCCTTTTGTGCCAGGAGGAGGGGACCTGGTTTCTGGCTGGAATCAGAGACTTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000563693.1
CDS CCA 90 bp GCAGGATGCCCTGATAGAGGCAGTCACAGATTCGTTGTGTCAAGATaGAGACAGCAGCAGCCACAGGGACTGGTGGCCCTGTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: AGCPDRGSHRFVVSR*RQQQPQGLVALWEG
Trigger: TCCCTCCCACAGGGCCACCAGTCCCTGTGGCTGCTGCTGTCTCCATCTTGACACAACGAATCTGTGACTGCCTCTATCAGGGCATCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS-3UTR CAA 90 bp CTTGAGGTTCCAGCCGGCTGGGCCACATTCCAGCCCCACTGGGCGGGAAGTAGAGCAGTCACAGATTCGTaGTGTCAAGATGGAGACAGC +
Preference number: 5 (lower is better)
Translates to: LEVPAGWATFQPHWAGSRAVTDS*CQDGDS
Trigger: GCTGTCTCCATCTTGACACAACGAATCTGTGACTGC...TCTACTTCCCGCCCAGTGGGGCTGGAATGTGGCCCAGCCGGCTGGAACCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268281.9
ENST00000569305.1
CDS-3UTR CAA 90 bp GGAAGTGGTGCTGGGACCCTAGCCCCTCAGCTCTGGATCAGGAGAGTCAGCAGGGCAGTCACAGATTCGTaGTGTCAAGATGGAGACAGC +
Preference number: 5 (lower is better)
Translates to: GSGAGTLAPQLWIRRVSRAVTDS*CQDGDS
Trigger: GCTGTCTCCATCTTGACACAACGAATCTGTGACTGC...CCTGCTGACTCTCCTGATCCAGAGCTGAGGGGCTAGGGTCCCAGCACCACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571878.1
CDS TCA 90 bp TTTCTGCCTCTGCACGTGACTTTCCCCCAGTCCGGCTACCTTACCTaGGTCCTGGAAGGCTCCTGGGATGGGACTGATGACAAGCATCAC +
Preference number: 5 (lower is better)
Translates to: FLPLHVTFPQSGYLT*VLEGSWDGTDDKHH
Trigger: GTGATGCTTGTCATCAGTCCCATCCCAGGAGCCTTCCAGGACTCAGGTAAGGTAGCCGGACTGGGGGAAAGTCACGTGCAGAGGCAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562390.1
CDS CCA 90 bp GCAGGATGCCCTGATAGAGGCAGTCACAGATTCGTTGTGTCAAGATaGAGACAGCAGCAGCCACAGGGACTCGGTCCTGGGGTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: AGCPDRGSHRFVVSR*RQQQPQGLGPGVLS
Trigger: GGAAAGAACCCCAGGACCGAGTCCCTGTGGCTGCTGCTGTCTCCATCTTGACACAACGAATCTGTGACTGCCTCTATCAGGGCATCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000562368.5
ENST00000569305.1
CDS-3UTR CAA 90 bp GTTCAAAATAGCCCGGGCACTGAGGCCCAATTAGCCAGAGCCGCTGCAATCTCGGCAGTCACAGATTCGTaGTGTCAAGATGGAGACAGC +
Preference number: 5 (lower is better)
Translates to: VQNSPGTEAQLARAAAISAVTDS*CQDGDS
Trigger: GCTGTCTCCATCTTGACACAACGAATCTGTGACTGC...CGAGATTGCAGCGGCTCTGGCTAATTGGGCCTCAGTGCCCGGGCTATTTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS-3UTR CAA 90 bp TACACCTTTATTGTCCGCTCCTCCCACCACCCCCAAGGATTCCTGGGTTCAAAAGTGTTTACACCTTTATaGTCCGCTCCTCCCACCACC +
Preference number: 5 (lower is better)
Translates to: YTFIVRSSHHPQGFLGSKVFTPL*SAPPTT
Trigger: GGTGGTGGGAGGAGCGGACAATAAAGGTGTAAACAC...TTTTGAACCCAGGAATCCTTGGGGGTGGTGGGAGGAGCGGACAATAAAGGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268281.9
CDS GCA 72 bp CGGGTGTGCGCGCCGTCCAGGGGCCCGTCCTGGGAGTaGACGCCCAGCAGTACCGACCACTCGGCCGCGGGC +
Preference number: 6 (lower is better)
Translates to: RVCAPSRGPSWE*TPSSTDHSAAG
Trigger: GCCCGCGGCCGAGTGGTCGGTACTGCTGGGCGTGCACTCCCAGGACGGGCCCCTGGACGGCGCGCACACCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
ENST00000569614.1
CDS GCA 72 bp CCTGGACGTCTCCCCAGCCGGTGGCCCAGCAGGCGGTaGCGTGCACGAAGCGGTGTGAGGCGCGGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: PGRLPSRWPSRR*RARSGVRRGAG
Trigger: GCCTGCCCCGCGCCTCACACCGCTTCGTGCACGGCACCGCCTGCTGGGCCACCGGCTGGGGAGACGTCCAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS CCA 72 bp TGCGGCGGGTCTCCGGGCAGCGGTACTGCCGCCCCCTaGCGGCCGTACAGGCAGTGGCACCACCAGCCGCCT +
Preference number: 6 (lower is better)
Translates to: CGGSPGSGTAAP*RPYRQWHHQPP
Trigger: AGGCGGCTGGTGGTGCCACTGCCTGTACGGCCGCCAGGGGGCGGCAGTACCGCTGCCCGGAGACCCGCCGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000563693.1
ENST00000569305.1
CDS GCA 72 bp AGGTCCGAGGCGTTGTCCCACGAAGCGTTCTCGTGCTaGACCAGGCGCGCCACCCGCTCCGCGCGCGGGCGC +
Preference number: 6 (lower is better)
Translates to: RSEALSHEAFSC*TRRATRSARGR
Trigger: GCGCCCGCGCGCGGAGCGGGTGGCGCGCCTGGTGCAGCACGAGAACGCTTCGTGGGACAACGCCTCGGACCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS GCA 72 bp GCCAGGTCCGAGGCGTTGTCCCACGAAGCGTTCTCGTaGTGCACCAGGCGCGCCACCCGCTCCGCGCGCGGG +
Preference number: 6 (lower is better)
Translates to: ARSEALSHEAFS*CTRRATRSARG
Trigger: CCCGCGCGCGGAGCGGGTGGCGCGCCTGGTGCAGCACGAGAACGCTTCGTGGGACAACGCCTCGGACCTGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS CCA 72 bp ACTGCGCGGGTGTGCGCGCCGTCCAGGGGCCCGTCCTaGGAGTGCACGCCCAGCAGTACCGACCACTCGGCC +
Preference number: 6 (lower is better)
Translates to: TARVCAPSRGPS*ECTPSSTDHSA
Trigger: GGCCGAGTGGTCGGTACTGCTGGGCGTGCACTCCCAGGACGGGCCCCTGGACGGCGCGCACACCCGCGCAGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
ENST00000569614.1
CDS GCA 72 bp TTGGCTGTAGTTGGCCGGCACCACGATGGCGGCCACTaGGCGGGTGTGCGCGCCGTCCAGGGGCCCGTCCTG +
Preference number: 6 (lower is better)
Translates to: LAVVGRHHDGGH*AGVRAVQGPVL
Trigger: CAGGACGGGCCCCTGGACGGCGCGCACACCCGCGCAGTGGCCGCCATCGTGGTGCCGGCCAACTACAGCCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
ENST00000569614.1
CDS CCA 72 bp CCAGCTCCACTTGGCTGTAGTTGGCCGGCACCACGATaGCGGCCACTGCGCGGGTGTGCGCGCCGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: PAPLGCSWPAPR*RPLRGCARRPG
Trigger: CCCTGGACGGCGCGCACACCCGCGCAGTGGCCGCCATCGTGGTGCCGGCCAACTACAGCCAAGTGGAGCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
ENST00000569614.1
CDS GCA 72 bp CGCGAAGCCGCGCTCAGGTTCACGGGCGTGCGCAGCTaGAGCAGCGCCAGGTCCGAGGCGTTGTCCCACGAA +
Preference number: 6 (lower is better)
Translates to: REAALRFTGVRS*SSARSEALSHE
Trigger: TTCGTGGGACAACGCCTCGGACCTGGCGCTGCTGCAGCTGCGCACGCCCGTGAACCTGAGCGCGGCTTCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS CCA 72 bp TGGGGCAGCCGGATGCTGATGACCAAGCGGGATACCTaGTGGCCCTGTGGGAGGGAGCTGGCCCCTGCCCGG +
Preference number: 6 (lower is better)
Translates to: WGSRMLMTKRDT*WPCGRELAPAR
Trigger: CCGGGCAGGGGCCAGCTCCCTCCCACAGGGCCACCAGGTATCCCGCTTGGTCATCAGCATCCGGCTGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000562368.5
ENST00000569305.1
CDS CAA 72 bp GGCGTGCGCAGCTGCAGCAGCGCCAGGTCCGAGGCGTaGTCCCACGAAGCGTTCTCGTGCTGCACCAGGCGC +
Preference number: 6 (lower is better)
Translates to: GVRSCSSARSEA*SHEAFSCCTRR
Trigger: GCGCCTGGTGCAGCACGAGAACGCTTCGTGGGACAACGCCTCGGACCTGGCGCTGCTGCAGCTGCGCACGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS GCA 72 bp CCGCAGATGTGGCCACCTCCATGGTGCAGGCTCACTTaGCAAGGCCAGGTGCCCGGCTGCGCGTTTGAGCCC +
Preference number: 6 (lower is better)
Translates to: PQMWPPPWCRLT*QGQVPGCAFEP
Trigger: GGGCTCAAACGCGCAGCCGGGCACCTGGCCTTGGCAAGTGAGCCTGCACCATGGAGGTGGCCACATCTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000561897.1
ENST00000562368.5
ENST00000569305.1
ENST00000569614.1
CDS TCA 72 bp GCCGCGGGCTCCAGCGTCCCATTCGTCATGAAACAGTaGGCAGCGGAGAGGACCCAGGAGGGGGCGATGAGG +
Preference number: 6 (lower is better)
Translates to: AAGSSVPFVMKQ*AAERTQEGAMR
Trigger: CCTCATCGCCCCCTCCTGGGTCCTCTCCGCTGCTCACTGTTTCATGACGAATGGGACGCTGGAGCCCGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000569305.1
CDS CCA 72 bp GATGCTGATGACCAAGCGGGATACCTGGTGGCCCTGTaGGAGGGAGCTGGCCCCTGCCCGGCCCAGATACAC +
Preference number: 6 (lower is better)
Translates to: DADDQAGYLVAL*EGAGPCPAQIH
Trigger: GTGTATCTGGGCCGGGCAGGGGCCAGCTCCCTCCCACAGGGCCACCAGGTATCCCGCTTGGTCATCAGCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000562368.5
ENST00000569305.1
CDS CCA 72 bp GGTGCCAAGACCCAGCTTTCAGACACCAGCGCCCCATaGCAGGGTCTGGATCCTGGCACCATCACCTGGGCC +
Preference number: 6 (lower is better)
Translates to: GAKTQLSDTSAP*QGLDPGTITWA
Trigger: GGCCCAGGTGATGGTGCCAGGATCCAGACCCTGCCATGGGGCGCTGGTGTCTGAAAGCTGGGTCTTGGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS CCA 72 bp GCCATGCCCACGAGGATCCAGGACCCTTCCGTCATCTaGCACAGGAGGGGCGGTGCTGAGGTCATCTGGTGG +
Preference number: 6 (lower is better)
Translates to: AMPTRIQDPSVI*HRRGGAEVIWW
Trigger: CCACCAGATGACCTCAGCACCGCCCCTCCTGTGCCAGATGACGGAAGGGTCCTGGATCCTCGTGGGCATGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418068.6
CDS GCA 72 bp GGACTGATGACAAGCATCACAAGGGGGAGGAGCAGGTaGCGGGCCATGGCGCTAGAGTCAGCGGAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: GLMTSITRGRSR*RAMALESAEAE
Trigger: CTCTGCCTCCGCTGACTCTAGCGCCATGGCCCGGCACCTGCTCCTCCCCCTTGTGATGCTTGTCATCAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562390.1
ENST00000569305.1
CDS CCA 72 bp CCAAGCGGGATACCTGGTGGCCCTGTGGGAGGGAGCTaGCCCCTGCCCGGCCCAGATACACTTCAATGTAAG +
Preference number: 6 (lower is better)
Translates to: PSGIPGGPVGGS*PLPGPDTLQCK
Trigger: CTTACATTGAAGTGTATCTGGGCCGGGCAGGGGCCAGCTCCCTCCCACAGGGCCACCAGGTATCCCGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268281.9
ENST00000562368.5
ENST00000569305.1
CDS TCA 72 bp GGCGGTTTCTCCGTCCACAGCCAAAGCCAAAGCTGGTaGTTCCTGCCTGGAACCAGCGGCCGCCTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: GGFSVHSQSQSW*FLPGTSGRLPH
Trigger: GTGAGGAAGGCGGCCGCTGGTTCCAGGCAGGAATCACCAGCTTTGGCTTTGGCTGTGGACGGAGAAACCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS GCA 72 bp GTCGGAGCTGTTCGGGTCCAGAAAGCAGCTGGCAGGTaGCAAGACCCAGCTTTCAGACACCAGCGCCCCATG +
Preference number: 6 (lower is better)
Translates to: VGAVRVQKAAGR*QDPAFRHQRPM
Trigger: CATGGGGCGCTGGTGTCTGAAAGCTGGGTCTTGGCACCTGCCAGCTGCTTTCTGGACCCGAACAGCTCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS CCA 72 bp GTGGGCTGTCGGAGCTGTTCGGGTCCAGAAAGCAGCTaGCAGGTGCCAAGACCCAGCTTTCAGACACCAGCG +
Preference number: 6 (lower is better)
Translates to: VGCRSCSGPESS*QVPRPSFQTPA
Trigger: CGCTGGTGTCTGAAAGCTGGGTCTTGGCACCTGCCAGCTGCTTTCTGGACCCGAACAGCTCCGACAGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000569305.1
CDS CCA 72 bp CTCCAGGTAGGCTCCCCGAGTCACATGGCTGATCCATaGGCCATGAGTCTGCAGAGGGAAGAAGGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: LQVGSPSHMADP*AMSLQREEGSG
Trigger: CCCCGAGCCTTCTTCCCTCTGCAGACTCATGGCCCATGGATCAGCCATGTGACTCGGGGAGCCTACCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000563693.1
ENST00000569305.1
CDS TCA 72 bp AGGCTCGGGGACGTAGACAGCCACTGGGAAAGTCTCTaGTTCCAGCCAGAAACCAGGTCCCCTCCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: RLGDVDSHWESL*FQPETRSPPPG
Trigger: GCCAGGAGGAGGGGACCTGGTTTCTGGCTGGAATCAGAGACTTTCCCAGTGGCTGTCTACGTCCCCGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000563693.1
ENST00000569305.1
CDS TCA 72 bp GCTGGTCCTCCAGGTAGGCTCCCCGAGTCACATGGCTaGTCCATGGGCCATGAGTCTGCAGAGGGAAGAAGG +
Preference number: 6 (lower is better)
Translates to: AGPPGRLPESHG*SMGHESAEGRR
Trigger: CCTTCTTCCCTCTGCAGACTCATGGCCCATGGATCAGCCATGTGACTCGGGGAGCCTACCTGGAGGACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000563693.1
ENST00000569305.1
CDS TCA 72 bp CTGCACGTGACTTTCCCCCAGTCCGGCTACCTTACCTaGGTCCTGGAAGGCTCCTGGGATGGGACTGATGAC +
Preference number: 6 (lower is better)
Translates to: LHVTFPQSGYLT*VLEGSWDGTDD
Trigger: GTCATCAGTCCCATCCCAGGAGCCTTCCAGGACTCAGGTAAGGTAGCCGGACTGGGGGAAAGTCACGTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562390.1
CDS CCA 72 bp TCAGGGCGCCCGCAGTCCAGATCTTCAGGTTCTTCCTaGGTAGGACTGAGAGCTGAGTCCTGGAAGGCTCCT +
Preference number: 6 (lower is better)
Translates to: SGRPQSRSSGSS*VGLRAESWKAP
Trigger: AGGAGCCTTCCAGGACTCAGCTCTCAGTCCTACCCAGGAAGAACCTGAAGATCTGGACTGCGGGCGCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000561897.1
ENST00000569305.1
CDS GCA 72 bp CCTATCTTCCCACTTCCCTGTCCGTTCAGCAACCCCTaGCAGCACCCATGCCAGTCCTCTGGTCTTTTCTGC +
Preference number: 6 (lower is better)
Translates to: PIFPLPCPFSNP*QHPCQSSGLFC
Trigger: GCAGAAAAGACCAGAGGACTGGCATGGGTGCTGGCAGGGGTTGCTGAACGGACAGGGAAGTGGGAAGATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562390.1
CDS CCA 72 bp TCTCTGATTCCAGCCAGAAACCAGGTCCCCTCCTCCTaGCACAAAAGGCTCCAACGCGAGTCATTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: SLIPARNQVPSS*HKRLQRESFQQ
Trigger: CTGCTGGAATGACTCGCGTTGGAGCCTTTTGTGCCAGGAGGAGGGGACCTGGTTTCTGGCTGGAATCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268281.9
ENST00000418068.6
ENST00000562368.5
ENST00000563693.1
CDS CCA 72 bp TCTCTGATTCCAGCCAGAAACCAGGTCCCCTCCTCCTaGCACAAAAGGCTCCAACGCGAGTCATTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SLIPARNQVPSS*HKRLQRESFSS
Trigger: GGAGGAGAATGACTCGCGTTGGAGCCTTTTGTGCCAGGAGGAGGGGACCTGGTTTCTGGCTGGAATCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569305.1