RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRSS33 (Homo sapiens)

Ensembl gene IDs: ENSG00000103355

Ensembl transcript IDs: ENST00000293851.9, ENST00000570702.5, ENST00000571674.1, ENST00000576886.5, ENST00000682474.1

Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTaGGGGTTCCGATTCCCTGCCGGCTGTCTCTCAGCTCTTAGAGGC +
Preference number: 1 (lower is better)
Translates to: SFRVLPESSALRLWV*GFRFPAGCLSALRG
Trigger: GCCTCTAAGAGCTGAGAGACAGCCGGCAGGGAATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR GCA 90 bp TCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTaGCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAG +
Preference number: 1 (lower is better)
Translates to: SRKRWAHRPDGQQLV*PSLRALRPALARAK
Trigger: CTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR TCA 90 bp CCAGCAGCTGGCTCCAGGTCAGCCTCACCGGCTAGCATTAGAAGCTaGCGCGAGCCTGAATCCAGGGGCTATATGTGGCCACACTGGTGT +
Preference number: 1 (lower is better)
Translates to: PAAGSRSASPASIRS*REPESRGYMWPHWC
Trigger: ACACCAGTGTGGCCACATATAGCCCCTGGATTCAGGCTCGCGTCAGCTTCTAATGCTAGCCGGTGAGGCTGACCTGGAGCCAGCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576886.5
3UTR GCA 90 bp GAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTaGCTTGCGGCTGTGGGTCTGAGGGTTCCGATTCCCTGCCGGCTG +
Preference number: 1 (lower is better)
Translates to: EELTSQLLQGAARIQ*LAAVGLRVPIPCRL
Trigger: CAGCCGGCAGGGAATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR CCA 90 bp CTTTCTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTaGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGG +
Preference number: 1 (lower is better)
Translates to: LSPEKDGHTGQMGSN*FAHHCVPCAQPWPG
Trigger: CCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR CCA 90 bp TTCCGATTCCCTGCCGGCTGTCTCTCAGCTCTTAGAGGCCGCTCATaGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCC +
Preference number: 1 (lower is better)
Translates to: FRFPAGCLSALRGRS*LWSPCPQSQLWRIS
Trigger: GGAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCTCTAAGAGCTGAGAGACAGCCGGCAGGGAATCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR GCA 90 bp TCTGGAGGCTGGGGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTaGCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGGTTCCGAT +
Preference number: 1 (lower is better)
Translates to: SGGWGRTYFPAPSGC*QNPVPCGCGSEGSD
Trigger: ATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCCCAGCCTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR GCA 90 bp ACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTaGGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAG +
Preference number: 1 (lower is better)
Translates to: TGQMGSNWFAHHCVP*AQPWPGPRKVNTSQ
Trigger: CTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR GCA 90 bp TTATCTGGAGGCTGGGGAAGAACTTACTTCCCAGCTCCTTCAGGGTaGTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGGTTCC +
Preference number: 1 (lower is better)
Translates to: LSGGWGRTYFPAPSG*CQNPVPCGCGSEGS
Trigger: GGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCCCAGCCTCCAGATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR CCA 90 bp GAAGGGAGTGGGGAGTGTGACTCCCTGGGACTCATGGCAGATTCCTaGATGAGGGTTGGTGGAGTCAGAGCTGGTGATCCCCAAAGAGGA +
Preference number: 1 (lower is better)
Translates to: EGSGECDSLGLMADS*MRVGGVRAGDPQRG
Trigger: TCCTCTTTGGGGATCACCAGCTCTGACTCCACCAACCCTCATCCAGGAATCTGCCATGAGTCCCAGGGAGTCACACTCCCCACTCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR TCA 90 bp TCAGGAGTGGCTCAGCTAGGTTCTCTGCTTAGGGTCTCTTTAGGTTaGAATGAAGGGATTGGCCGGCGGGGCTCTTATCTGGAGGCTGGG +
Preference number: 1 (lower is better)
Translates to: SGVAQLGSLLRVSLG*NEGIGRRGSYLEAG
Trigger: CCCAGCCTCCAGATAAGAGCCCCGCCGGCCAATCCCTTCATTTCAACCTAAAGAGACCCTAAGCAGAGAACCTAGCTGAGCCACTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR TCA 90 bp AGGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTaGCTCCCTGGGACTCATGGCAGATTCCTGGATGAGGGTTGGTGG +
Preference number: 1 (lower is better)
Translates to: RAKKSKYKPGREWGV*LPGTHGRFLDEGWW
Trigger: CCACCAACCCTCATCCAGGAATCTGCCATGAGTCCCAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR CCA 90 bp TGTGAATCTGACTTTCTCCAGAAAAAGATGGGCACACAGGCCAGATaGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGC +
Preference number: 1 (lower is better)
Translates to: CESDFLQKKMGTQAR*AAIGLPITACLAPS
Trigger: GCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAAAGTCAGATTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR GCA 90 bp TCAAAGCCAGCTATGGAGGATCTCCCTGGTGTCAAATCTCTGTCATaGTGTGAATCTGACTTTCTCCAGAAAAAGATGGGCACACAGGCC +
Preference number: 1 (lower is better)
Translates to: SKPAMEDLPGVKSLS*CESDFLQKKMGTQA
Trigger: GGCCTGTGTGCCCATCTTTTTCTGGAGAAAGTCAGATTCACAGCATGACAGAGATTTGACACCAGGGAGATCCTCCATAGCTGGCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp TGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGGTTCCGATTCCCTGCCGGGGGACTCCGGAGGCTaGGGAGGCTGGGTGCACACC +
Preference number: 2 (lower is better)
Translates to: CQNPVPCGCGSEGSDSLPGDSGG*GGWVHT
Trigger: GGTGTGCACCCAGCCTCCCCAGCCTCCGGAGTCCCC...CGGCAGGGAATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576886.5
3UTR-3UTR CCA 90 bp ATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAGGGAGGGAGGGTGCTaGGCACAGGGAGGGGACTCC +
Preference number: 2 (lower is better)
Translates to: IGLPITACLAPSPGQGQEREGGC*AQGGDS
Trigger: GGAGTCCCCTCCCTGTGCCCAGCACCCTCCCTCCCT...TTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576886.5
3UTR-3UTR CCA 90 bp AGGCCGCTCATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCGGCTGGGTGCACACCTaGCAGGCGTCCTTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: RPLMAVVPVSSKPAMEDLGWVHT*QASLWP
Trigger: GGGCCACAAGGACGCCTGCCAGGTGTGCACCCAGCC...GAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576886.5
3UTR-3UTR TCA 90 bp GCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGGTTCCGATTCCCTGCAGGGAGTGGGGAGTGTaGCTCCCTGGGACTCATGGC +
Preference number: 2 (lower is better)
Translates to: AARIQCLAAVGLRVPIPCREWGV*LPGTHG
Trigger: GCCATGAGTCCCAGGGAGTCACACTCCCCACTCCCT...GCAGGGAATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR GCA 90 bp GATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTCATCACTGCGTGCCTTaGGCCCAGCCCTGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: DGHTGQMGSNWFAHHCVPHHCVP*AQPWPG
Trigger: CCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATG...AGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR GCA 90 bp GGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGCAGAATCCAGTGCCTTaGGGCTGTGGGTCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: GQQLVCPSLRALRPALARQNPVP*GCGSEG
Trigger: ACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTG...CCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp CCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGAGACCCCTGGACGGTTaGGCAGGGCACAACCCTTGC +
Preference number: 2 (lower is better)
Translates to: PAPSGCCQNPVPCGCGSERPLDG*AGHNPC
Trigger: GCAAGGGTTGTGCCCTGCCCAACCGTCCAGGGGTCT...CTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576886.5
3UTR-3UTR TCA 90 bp AGGCCGCTCATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCAGGGAGTGGGGAGTGTaGCTCCCTGGGACTCATGGC +
Preference number: 2 (lower is better)
Translates to: RPLMAVVPVSSKPAMEDLREWGV*LPGTHG
Trigger: GCCATGAGTCCCAGGGAGTCACACTCCCCACTCCCT...GAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR TCA 90 bp GCCGGCGGGGCTCTTATCTGGAGGCTGGGGAAGAACTTACTTCCCAGCTCCTTCAGGGAGTGGGGAGTGTaGCTCCCTGGGACTCATGGC +
Preference number: 2 (lower is better)
Translates to: AGGALIWRLGKNLLPSSFREWGV*LPGTHG
Trigger: GCCATGAGTCCCAGGGAGTCACACTCCCCACTCCCT...GAAGGAGCTGGGAAGTAAGTTCTTCCCCAGCCTCCAGATAAGAGCCCCGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR GCA 90 bp AGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCATGGGGTATAGGCAGGTaGCTGGATGAACCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: SNWFAHHCVPCAQPWPGPWGIGR*LDEPGG
Trigger: GCCTCCTGGTTCATCCAGGCACCTGCCTATACCCCA...TGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR GCA 90 bp TACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTGGTTTGCCCATCACTaGGTGCCTTGCGCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: YFPAPSGCCQNPVPCGCGWFAHH*VPCAQP
Trigger: GGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCA...CCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp TGGGGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTGGAGGCTGGGGAGGCTaGGTGCACACCTGGCAGGCG +
Preference number: 2 (lower is better)
Translates to: WGRTYFPAPSGCCQNPVPGGWGG*VHTWQA
Trigger: CGCCTGCCAGGTGTGCACCCAGCCTCCCCAGCCTCC...AGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576886.5
3UTR CAA 90 bp CTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTaGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAA +
Preference number: 2 (lower is better)
Translates to: LQKKMGTQARWAAIG*PITACLAPSPGQGQ
Trigger: TTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp CAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGGGCACACAGGCCAGATaGGCAGCAATTGGTTTGCCC +
Preference number: 2 (lower is better)
Translates to: QLLQGAARIQCLAAVGLRGTQAR*AAIGLP
Trigger: GGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCC...CCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp AGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAATCCTGAGCCTGAGTTaGGATGTCCTGGGTCCTGGA +
Preference number: 2 (lower is better)
Translates to: SNWFAHHCVPCAQPWPGPILSLS*DVLGPG
Trigger: TCCAGGACCCAGGACATCCCAACTCAGGCTCAGGAT...TGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
3UTR-3UTR CCA 90 bp AGGCCGCTCATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCACTGGTGTAGACCCCTaGACGGTTGGGCAGGGCACA +
Preference number: 2 (lower is better)
Translates to: RPLMAVVPVSSKPAMEDLTGVDP*TVGQGT
Trigger: TGTGCCCTGCCCAACCGTCCAGGGGTCTACACCAGT...GAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576886.5
3UTR CAA 90 bp ACTTCAGTTCTCAGGGTTCCAGACCCCTGGCGTGGTGCCTCTAGGTaGGAGGCCAGGATCCTGAGCCTGAGTTGGGATGTCCTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: TSVLRVPDPWRGASR*EARILSLSWDVLGP
Trigger: AGGACCCAGGACATCCCAACTCAGGCTCAGGATCCTGGCCTCCAACCTAGAGGCACCACGCCAGGGGTCTGGAACCCTGAGAACTGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576886.5
3UTR-3UTR TCA 90 bp GGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGATGAACCAGGAGGCTaGGGGACCCCAGCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: GRTYFPAPSGCCQNPVPCDEPGG*GTPAAG
Trigger: GCCAGCTGCTGGGGTCCCTCAGCCTCCTGGTTCATC...GCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR TCA 90 bp CCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGTGGCAGATTCCTGGATaGGGGTTGGTGGAGTCAGAG +
Preference number: 2 (lower is better)
Translates to: PAPSGCCQNPVPCGCGSEWQIPG*GLVESE
Trigger: CTCTGACTCCACCAACCCTCATCCAGGAATCTGCCA...CTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR GCA 90 bp GCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATGCTCCTTCAGGGTGCTaGCAGAATCCAGTGCCTTGC +
Preference number: 2 (lower is better)
Translates to: AHHCVPCAQPWPGPRKVNAPSGC*QNPVPC
Trigger: GCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGC...ATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp GATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTCCTTGCGCCCAGCCCTaGCCAGGGCCAAGAAAAGTA +
Preference number: 2 (lower is better)
Translates to: DGHTGQMGSNWFAHHCVPPCAQP*PGPRKV
Trigger: TACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGG...AGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp TTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAGGCACACAGGCCAGATaGGCAGCAATTGGTTTGCCC +
Preference number: 2 (lower is better)
Translates to: FAHHCVPCAQPWPGPRKVGTQAR*AAIGLP
Trigger: GGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCC...TACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR CAA 90 bp ACTTTCTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATaGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: TFSRKRWAHRPDGQQ*VCPSLRALRPALAR
Trigger: CCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR GCA 90 bp TGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGTGGGGTATAGGCAGGTaGCTGGATGAACCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: CVPCAQPWPGPRKVNTSQWGIGR*LDEPGG
Trigger: GCCTCCTGGTTCATCCAGGCACCTGCCTATACCCCA...CTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp CATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCCCTGGTGTGAGGCAGAAGGGATGTaGGGTATAGGCAGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: HGCGPRVLKASYGGSPWCEAEGM*GIGRCL
Trigger: CAGGCACCTGCCTATACCCCACATCCCTTCTGCCTC...ACACCAGGGAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp TGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGGAGGCAGAAGGGATGTaGGGTATAGGCAGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: CVPCAQPWPGPRKVNTSQEAEGM*GIGRCL
Trigger: CAGGCACCTGCCTATACCCCACATCCCTTCTGCCTC...CTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp TACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGGGGAGTGTGACTCCCTaGGACTCATGGCAGATTCCT +
Preference number: 2 (lower is better)
Translates to: YFPAPSGCCQNPVPCGCGGSVTP*DSWQIP
Trigger: AGGAATCTGCCATGAGTCCCAGGGAGTCACACTCCC...CCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR TCA 90 bp GCTGTGAATCTGACTTTCTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGGATGAACCAGGAGGCTaGGGGACCCCAGCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: AVNLTFSRKRWAHRPDGQDEPGG*GTPAAG
Trigger: GCCAGCTGCTGGGGTCCCTCAGCCTCCTGGTTCATC...CTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAAAGTCAGATTCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR GCA 90 bp CGGCGGGGCTCTTATCTGGAGGCTGGGGAAGAACTTACTTCCCAGCTCCTTCAGGGGCAGCAATTGGTTTaGCCATCACTGCGTGCCTTG +
Preference number: 2 (lower is better)
Translates to: RRGSYLEAGEELTSQLLQGQQLV*PSLRAL
Trigger: CAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCC...CTGAAGGAGCTGGGAAGTAAGTTCTTCCCCAGCCTCCAGATAAGAGCCCCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp TGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTGAGGCAGAAGGGATGTaGGGTATAGGCAGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: CAQPWPGPRKVNTSQEGSEAEGM*GIGRCL
Trigger: CAGGCACCTGCCTATACCCCACATCCCTTCTGCCTC...ACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp GCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATCTCATGGCAGATTCCTaGATGAGGGTTGGTGGAGTC +
Preference number: 2 (lower is better)
Translates to: AHHCVPCAQPWPGPRKVNLMADS*MRVGGV
Trigger: GACTCCACCAACCCTCATCCAGGAATCTGCCATGAG...ATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp GCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATCAGATGGGCAGCAATTaGTTTGCCCATCACTGCGTG +
Preference number: 2 (lower is better)
Translates to: AHHCVPCAQPWPGPRKVNQMGSN*FAHHCV
Trigger: CACGCAGTGATGGGCAAACCAATTGCTGCCCATCTG...ATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp CATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCCCTGGTGTCTCATGGCAGATTCCTaGATGAGGGTTGGTGGAGTC +
Preference number: 2 (lower is better)
Translates to: HGCGPRVLKASYGGSPWCLMADS*MRVGGV
Trigger: GACTCCACCAACCCTCATCCAGGAATCTGCCATGAG...ACACCAGGGAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR GCA 90 bp GGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGCAGAATCCAGTGCCTTaGGGCTGTGGGTCTGAGGGT +
Preference number: 2 (lower is better)
Translates to: GPRKVNTSQEGSGECDSLQNPVP*GCGSEG
Trigger: ACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTG...CAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR GCA 90 bp GCTGTGAATCTGACTTTCTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGGCTGCCAGAATCCAGTaGCTTGCGGCTGTGGGTCTG +
Preference number: 2 (lower is better)
Translates to: AVNLTFSRKRWAHRPDGQAARIQ*LAAVGL
Trigger: CAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGC...CTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAAAGTCAGATTCACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp GGGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGGGGAGTGTGACTCCCTaGGACTCATGGCAGATTCCT +
Preference number: 2 (lower is better)
Translates to: GKNLLPSSFRVLPESSALGSVTP*DSWQIP
Trigger: AGGAATCTGCCATGAGTCCCAGGGAGTCACACTCCC...CAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR GCA 90 bp AAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGGGACTCATGTGGGGTATAGGCAGGTaGCTGGATGAACCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: KVNTSQEGSGECDSLGLMWGIGR*LDEPGG
Trigger: GCCTCCTGGTTCATCCAGGCACCTGCCTATACCCCA...CATGAGTCCCAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR GCA 90 bp GGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGGGGCAGCAATTGGTTTaGCCATCACTGCGTGCCTTG +
Preference number: 2 (lower is better)
Translates to: GPRKVNTSQEGSGECDSLGQQLV*PSLRAL
Trigger: CAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCC...CAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR GCA 90 bp GCTGTGAATCTGACTTTCTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCCAGCTCCTTCAGGGTaGTGCCAGAATCCAGTGCCT +
Preference number: 2 (lower is better)
Translates to: AVNLTFSRKRWAHRPDGQPAPSG*CQNPVP
Trigger: AGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG...CTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAAAGTCAGATTCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp AAGTCACAACTTTGTAGGTCAGGAGTGGCTCAGCTAGGTTCTCTGCTTAGGGTCCCTTGCGCCCAGCCCTaGCCAGGGCCAAGAAAAGTA +
Preference number: 2 (lower is better)
Translates to: KSQLCRSGVAQLGSLLRVPCAQP*PGPRKV
Trigger: TACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGG...GACCCTAAGCAGAGAACCTAGCTGAGCCACTCCTGACCTACAAAGTTGTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR TCA 90 bp AATCTCTGTCATGCTGTGAATCTGACTTTCTCCAGAAAAAGATGGGCACACAGGGATGAACCAGGAGGCTaGGGGACCCCAGCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: NLCHAVNLTFSRKRWAHRDEPGG*GTPAAG
Trigger: GCCAGCTGCTGGGGTCCCTCAGCCTCCTGGTTCATC...CCTGTGTGCCCATCTTTTTCTGGAGAAAGTCAGATTCACAGCATGACAGAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR TCA 90 bp TCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCATGGCAGATTCCTGGATaGGGGTTGGTGGAGTCAGAG +
Preference number: 2 (lower is better)
Translates to: SRKRWAHRPDGQQLVCPSWQIPG*GLVESE
Trigger: CTCTGACTCCACCAACCCTCATCCAGGAATCTGCCA...TGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR GCA 90 bp TCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCAGGGCAGCAATTGGTTTaGCCATCACTGCGTGCCTTG +
Preference number: 2 (lower is better)
Translates to: SRKRWAHRPDGQQLVCPSGQQLV*PSLRAL
Trigger: CAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCC...TGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CCA 90 bp TCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCATATATGTGGCCACACTaGTGTAGACCCCTGGACGGT +
Preference number: 2 (lower is better)
Translates to: SRKRWAHRPDGQQLVCPSYMWPH*CRPLDG
Trigger: ACCGTCCAGGGGTCTACACCAGTGTGGCCACATATA...TGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576886.5
3UTR-3UTR CCA 90 bp AAGTCACAACTTTGTAGGTCAGGAGTGGCTCAGCTAGGTTCTCTGCTTAGGGTCCAGATGGGCAGCAATTaGTTTGCCCATCACTGCGTG +
Preference number: 2 (lower is better)
Translates to: KSQLCRSGVAQLGSLLRVQMGSN*FAHHCV
Trigger: CACGCAGTGATGGGCAAACCAATTGCTGCCCATCTG...GACCCTAAGCAGAGAACCTAGCTGAGCCACTCCTGACCTACAAAGTTGTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR CCA 72 bp TGGGCACAGGGAGGGGACTCCGGAGGCTGGGGAGGCTaGGTGCACACCTGGCAGGCGTCCTTGTGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: WAQGGDSGGWGG*VHTWQASLWPW
Trigger: CCAGGGCCACAAGGACGCCTGCCAGGTGTGCACCCAGCCTCCCCAGCCTCCGGAGTCCCCTCCCTGTGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576886.5
3UTR GCA 72 bp AGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTaGCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCC +
Preference number: 3 (lower is better)
Translates to: RWAHRPDGQQLV*PSLRALRPALA
Trigger: GGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR TCA 72 bp GTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTaGGGGTTCCGATTCCCTGCCGGCTGTCTCTCAGCT +
Preference number: 3 (lower is better)
Translates to: VLPESSALRLWV*GFRFPAGCLSA
Trigger: AGCTGAGAGACAGCCGGCAGGGAATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR CCA 72 bp CCTGCCGGCTGTCTCTCAGCTCTTAGAGGCCGCTCATaGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGG +
Preference number: 3 (lower is better)
Translates to: PAGCLSALRGRS*LWSPCPQSQLW
Trigger: CCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCTCTAAGAGCTGAGAGACAGCCGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR GCA 72 bp ACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTaGCTTGCGGCTGTGGGTCTGAGGGTTCCGATTCCC +
Preference number: 3 (lower is better)
Translates to: TSQLLQGAARIQ*LAAVGLRVPIP
Trigger: GGGAATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CAA 90 bp CAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGTGGGCAGCAATTGGTTaGCCCATCACTGCGTGCCTT +
Preference number: 3 (lower is better)
Translates to: QLLQGAARIQCLAAVGLRWAAIG*PITACL
Trigger: AAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCA...CCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR GCA 72 bp GGCTGGGGAAGAACTTACTTCCCAGCTCCTTCAGGGTaGTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCT +
Preference number: 3 (lower is better)
Translates to: GWGRTYFPAPSG*CQNPVPCGCGS
Trigger: AGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR CCA 72 bp GGGGAGTGTGACTCCCTGGGACTCATGGCAGATTCCTaGATGAGGGTTGGTGGAGTCAGAGCTGGTGATCCC +
Preference number: 3 (lower is better)
Translates to: GECDSLGLMADS*MRVGGVRAGDP
Trigger: GGGATCACCAGCTCTGACTCCACCAACCCTCATCCAGGAATCTGCCATGAGTCCCAGGGAGTCACACTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR CCA 72 bp GAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTaGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCC +
Preference number: 3 (lower is better)
Translates to: EKDGHTGQMGSN*FAHHCVPCAQP
Trigger: GGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CAA 90 bp CGGCGGGGCTCTTATCTGGAGGCTGGGGAAGAACTTACTTCCCAGCTCCTTCAGTGGGCAGCAATTGGTTaGCCCATCACTGCGTGCCTT +
Preference number: 3 (lower is better)
Translates to: RRGSYLEAGEELTSQLLQWAAIG*PITACL
Trigger: AAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCA...CTGAAGGAGCTGGGAAGTAAGTTCTTCCCCAGCCTCCAGATAAGAGCCCCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CAA 90 bp AGGAGAAAGAGGAGCCTAAGTCCCAGCCCTCCCAGGACTTCAGTTCTCAGGGTTGATCCTGAGCCTGAGTaGGGATGTCCTGGGTCCTGG +
Preference number: 3 (lower is better)
Translates to: RRKRSLSPSPPRTSVLRVDPEPE*GCPGSW
Trigger: CCAGGACCCAGGACATCCCAACTCAGGCTCAGGATC...AACCCTGAGAACTGAAGTCCTGGGAGGGCTGGGACTTAGGCTCCTCTTTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
3UTR GCA 72 bp TGGGGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTaGCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAG +
Preference number: 3 (lower is better)
Translates to: WGRTYFPAPSGC*QNPVPCGCGSE
Trigger: CTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CAA 90 bp AAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGGGACTCATGCGTGGTGCCTCTAGGTaGGAGGCCAGGATCCTGAGC +
Preference number: 3 (lower is better)
Translates to: KVNTSQEGSGECDSLGLMRGASR*EARILS
Trigger: GCTCAGGATCCTGGCCTCCAACCTAGAGGCACCACG...CATGAGTCCCAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576886.5
3UTR TCA 72 bp AGTGTGACTCCCTGGGACTCATGGCAGATTCCTGGATaGGGGTTGGTGGAGTCAGAGCTGGTGATCCCCAAA +
Preference number: 3 (lower is better)
Translates to: SVTPWDSWQIPG*GLVESELVIPK
Trigger: TTTGGGGATCACCAGCTCTGACTCCACCAACCCTCATCCAGGAATCTGCCATGAGTCCCAGGGAGTCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR CCA 72 bp GTTGAAATGAAGGGATTGGCCGGCGGGGCTCTTATCTaGAGGCTGGGGAAGAACTTACTTCCCAGCTCCTTC +
Preference number: 3 (lower is better)
Translates to: VEMKGLAGGALI*RLGKNLLPSSF
Trigger: GAAGGAGCTGGGAAGTAAGTTCTTCCCCAGCCTCCAGATAAGAGCCCCGCCGGCCAATCCCTTCATTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CAA 90 bp TCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCACCAGATGGGCAGCAATaGGTTTGCCCATCACTGCGT +
Preference number: 3 (lower is better)
Translates to: SRKRWAHRPDGQQLVCPSPDGQQ*VCPSLR
Trigger: ACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGG...TGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR-3UTR CAA 90 bp GCTGTGAATCTGACTTTCTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCCAGATGGGCAGCAATaGGTTTGCCCATCACTGCGT +
Preference number: 3 (lower is better)
Translates to: AVNLTFSRKRWAHRPDGQPDGQQ*VCPSLR
Trigger: ACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGG...CTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAAAGTCAGATTCACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR CCA 72 bp GACTTTCTCCAGAAAAAGATGGGCACACAGGCCAGATaGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTT +
Preference number: 3 (lower is better)
Translates to: DFLQKKMGTQAR*AAIGLPITACL
Trigger: AAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
3UTR GCA 72 bp GCTATGGAGGATCTCCCTGGTGTCAAATCTCTGTCATaGTGTGAATCTGACTTTCTCCAGAAAAAGATGGGC +
Preference number: 3 (lower is better)
Translates to: AMEDLPGVKSLS*CESDFLQKKMG
Trigger: GCCCATCTTTTTCTGGAGAAAGTCAGATTCACAGCATGACAGAGATTTGACACCAGGGAGATCCTCCATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGGCAGGCAGACGGGTTaGACGCGAGCGCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GQQLVCPSLRALRPALARGRQTG*TRALRG
Trigger: GCCCCTGAGCGCTCGCGTCCAACCCGTCTGCCTGCC...CCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR CCA 90 bp GGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGGAGGCTGGGGAGGCTaGGTGCACACCTGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GQQLVCPSLRALRPALARGGWGG*VHTWQA
Trigger: CGCCTGCCAGGTGTGCACCCAGCCTCCCCAGCCTCC...CCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR GCA 90 bp TGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGGTTCCGATTCCCTGCCGCGGGCACCGAGAGCGTaGGGGGCGAGGTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: CQNPVPCGCGSEGSDSLPRAPRA*GARWSP
Trigger: TGGGCTCCACCTCGCCCCGCACGCTCTCGGTGCCCG...CGGCAGGGAATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR GCA 90 bp CCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGACGCAGCTGCAGCAGTaGCAGGTCGCCGCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PAPSGCCQNPVPCGCGSETQLQQ*QVAAGP
Trigger: GGGGCCCGCGGCGACCTGGCACTGCTGCAGCTGCGT...CTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR GCA 90 bp GGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGCATCACTGCGTGCCTTaGGCCCAGCCCTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GQQLVCPSLRALRPALARHHCVP*AQPWPG
Trigger: CCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATG...CCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp CCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGTGGGAGGGGCACTCCTaGGCGGAGGCTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PAPSGCCQNPVPCGCGSEWEGHS*AEAAPA
Trigger: GGCTGGGGCAGCCTCCGCCCAGGAGTGCCCCTCCCA...CTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR GCA 90 bp AGGCCGCTCATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCCGGGCACCGAGAGCGTaGGGGGCGAGGTGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RPLMAVVPVSSKPAMEDLRAPRA*GARWSP
Trigger: TGGGCTCCACCTCGCCCCGCACGCTCTCGGTGCCCG...GAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR GCA 90 bp AATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAACCGGGCGACGCAGCTaGAGCAGTGCCAGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: NWFAHHCVPCAQPWPGPRTGRRS*SSARSP
Trigger: CGGCGACCTGGCACTGCTGCAGCTGCGTCGCCCGGT...TCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR GCA 90 bp GATGGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCCATCACTGCGTGCCTTaGGCCCAGCCCTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: DGQQLVCPSLRALRPALAHHCVP*AQPWPG
Trigger: CCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATG...GGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp AGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAACAATGCGCTCAGCCTaGGGCACGTCCGCGCCCACG +
Preference number: 4 (lower is better)
Translates to: SNWFAHHCVPCAQPWPGPTMRSA*GTSAPT
Trigger: CGTGGGCGCGGACGTGCCCCAGGCTGAGCGCATTGT...TGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp ATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAACGATCCGACTGGACATaGGGGGCTGCCCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: IGLPITACLAPSPGQGQERSDWT*GAARRL
Trigger: CAGCCTGCGGGCAGCCCCGCATGTCCAGTCGGATCG...TTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp AATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGACGATCCGACTGGACATaGGGGGCTGCCCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NWFAHHCVPCAQPWPGPRRSDWT*GAARRL
Trigger: CAGCCTGCGGGCAGCCCCGCATGTCCAGTCGGATCG...TCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp TGGCCACACTGGTGTAGACCCCTGGACGGTTGGGCAGGGCACAACCCTTGCCCCACGTGTGCCCCACGATaGTGGATGCTCGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: WPHWCRPLDGWAGHNPCPTCAPR*WMLACH
Trigger: GTGGCAGGCGAGCATCCAGCATCGTGGGGCACACGT...GGGGCAAGGGTTGTGCCCTGCCCAACCGTCCAGGGGTCTACACCAGTGTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR GCA 90 bp TGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGACGCAGCTGCAGCAGTaGCAGGTCGCCGCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: CVPCAQPWPGPRKVNTSQTQLQQ*QVAAGP
Trigger: GGGGCCCGCGGCGACCTGGCACTGCTGCAGCTGCGT...CTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR GCA 90 bp GCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACCGGGCGACGCAGCTaGAGCAGTGCCAGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: AHHCVPCAQPWPGPRKVNTGRRS*SSARSP
Trigger: CGGCGACCTGGCACTGCTGCAGCTGCGTCGCCCGGT...ATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR GCA 90 bp CAGCTGGCTCCAGGTCAGCCTCACCGGCTAGCATTAGAAGCTGACGCGAGCCTGCATCACTGCGTGCCTTaGGCCCAGCCCTGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QLAPGQPHRLALEADASLHHCVP*AQPWPG
Trigger: CCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATG...CAGGCTCGCGTCAGCTTCTAATGCTAGCCGGTGAGGCTGACCTGGAGCCAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR CCA 90 bp TGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGGTTCCGATTCCCTGCCGCCCCAACGATCCGACTaGACATGCGGGGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: CQNPVPCGCGSEGSDSLPPQRSD*TCGAAR
Trigger: GCGGGCAGCCCCGCATGTCCAGTCGGATCGTTGGGG...CGGCAGGGAATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGGTTCCGATTCCCTGCCTGGCAGTGCCCTCCTaGGGAAGCAGTGCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AARIQCLAAVGLRVPIPCLAVPS*GSSAPL
Trigger: CAGCGGCGCACTGCTTCCCCAGGAGGGCACTGCCAG...GCAGGGAATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR CCA 90 bp TGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGGTTCCGATTCCCTGCCGACAATGCGCTCAGCCTaGGGCACGTCCGCGCCCACG +
Preference number: 4 (lower is better)
Translates to: CQNPVPCGCGSEGSDSLPTMRSA*GTSAPT
Trigger: CGTGGGCGCGGACGTGCCCCAGGCTGAGCGCATTGT...CGGCAGGGAATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp ATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAACTCTGGGAGGGGCACTaGGGAAGCAGTGCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: IGLPITACLAPSPGQGQELWEGH*GSSAPL
Trigger: CAGCGGCGCACTGCTTCCCCAGTGCCCCTCCCAGAG...TTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR CCA 90 bp CAGCTGGCTCCAGGTCAGCCTCACCGGCTAGCATTAGAAGCTGACGCGAGCCTGGGCTGGGTGCACACCTaGCAGGCGTCCTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: QLAPGQPHRLALEADASLGWVHT*QASLWP
Trigger: GGGCCACAAGGACGCCTGCCAGGTGTGCACCCAGCC...CAGGCTCGCGTCAGCTTCTAATGCTAGCCGGTGAGGCTGACCTGGAGCCAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR CCA 90 bp AATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAGGGAGGGAGGGTGCTaGGCACAGGGAGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: NWFAHHCVPCAQPWPGPRREGGC*AQGGDS
Trigger: GGAGTCCCCTCCCTGTGCCCAGCACCCTCCCTCCCT...TCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR GCA 90 bp GCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATCGATCCGACTGGACATaGGGGGCTGCCCGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AHHCVPCAQPWPGPRKVNRSDWT*GAARRL
Trigger: CAGCCTGCGGGCAGCCCCGCATGTCCAGTCGGATCG...ATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp AGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAACGTGTGCCCCACGATaGTGGATGCTCGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SNWFAHHCVPCAQPWPGPTCAPR*WMLACH
Trigger: GTGGCAGGCGAGCATCCAGCATCGTGGGGCACACGT...TGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCTTGCGCCCAGCCCTaGCCAGGGCCAAGAAAAGTA +
Preference number: 4 (lower is better)
Translates to: GSNWFAHHCVPCAQPWPGPCAQP*PGPRKV
Trigger: TACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGG...CCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp AGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAGCACTGCCTAGGGCTTaGACTCTGGTCTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SNWFAHHCVPCAQPWPGPALPRA*TLVWAP
Trigger: GGGAGCCCAGACCAGAGTCCAAGCCCTAGGCAGTGC...TGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570702.5
CDS-3UTR TCA 90 bp CCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGAGGGAGTGGGGAGTGTaGCTCCCTGGGACTCATGGC +
Preference number: 4 (lower is better)
Translates to: PAPSGCCQNPVPCGCGSEREWGV*LPGTHG
Trigger: GCCATGAGTCCCAGGGAGTCACACTCCCCACTCCCT...CTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR TCA 90 bp CAGCTGGCTCCAGGTCAGCCTCACCGGCTAGCATTAGAAGCTGACGCGAGCCTGAGGGAGTGGGGAGTGTaGCTCCCTGGGACTCATGGC +
Preference number: 4 (lower is better)
Translates to: QLAPGQPHRLALEADASLREWGV*LPGTHG
Trigger: GCCATGAGTCCCAGGGAGTCACACTCCCCACTCCCT...CAGGCTCGCGTCAGCTTCTAATGCTAGCCGGTGAGGCTGACCTGGAGCCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR GCA 90 bp GCTCTTAGAGGCCGCTCATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGTGCTGGATGCTCGCCTaGCACGGCCACTCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: ALRGRSWLWSPCPQSQLWCWMLA*HGHSPS
Trigger: GGACGGAGAGTGGCCGTGGCAGGCGAGCATCCAGCA...CCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCTCTAAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp TTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTACCCCACGATGCTGGATaGTCGCCTGCCACGGCCACT +
Preference number: 4 (lower is better)
Translates to: FAHHCVPCAQPWPGPRKVPHDAG*SPATAT
Trigger: AGTGGCCGTGGCAGGCGAGCATCCAGCATCGTGGGG...TACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp CCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGACGTGTGCCCCACGATaGTGGATGCTCGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PAPSGCCQNPVPCGCGSETCAPR*WMLACH
Trigger: GTGGCAGGCGAGCATCCAGCATCGTGGGGCACACGT...CTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp AATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGATGGTTTGCCCATCACTaGGTGCCTTGCGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: NWFAHHCVPCAQPWPGPRWFAHH*VPCAQP
Trigger: GGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCA...TCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp CCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGTGGTTTGCCCATCACTaGGTGCCTTGCGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PAPSGCCQNPVPCGCGSEWFAHH*VPCAQP
Trigger: GGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCA...CTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp GGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCAGAATCCAGTGCCTTaGGGCTGTGGGTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: GSNWFAHHCVPCAQPWPGQNPVP*GCGSEG
Trigger: ACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTG...CCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATTGTGCCCCACGATGCTaGATGCTCGCCTGCCACGGC +
Preference number: 4 (lower is better)
Translates to: AHHCVPCAQPWPGPRKVNCAPRC*MLACHG
Trigger: GCCGTGGCAGGCGAGCATCCAGCATCGTGGGGCACA...ATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp GCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATGGGCTGCCCGCAGGCTaGAGACTTCCTTCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: AHHCVPCAQPWPGPRKVNGLPAG*RLPSLS
Trigger: ACTCAGGGAAGGAAGTCTGCAGCCTGCGGGCAGCCC...ATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp GATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTCTGGACATGCGGGGCTaGCCGCAGGCTGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: DGHTGQMGSNWFAHHCVPLDMRG*PQAADF
Trigger: GAAGTCTGCAGCCTGCGGGCAGCCCCGCATGTCCAG...AGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp CCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGTACTCAGCTGGCAGTaGCCTCCTGGGGAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PAPSGCCQNPVPCGCGSEVLSWQ*PPGEAV
Trigger: CACTGCTTCCCCAGGAGGGCACTGCCAGCTGAGTAC...CTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR GCA 90 bp GATGGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCGCTCCTTCAGGGTGCTaGCAGAATCCAGTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: DGQQLVCPSLRALRPALAAPSGC*QNPVPC
Trigger: GCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGC...GGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp TGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGTGTGCCCCACGATGCTaGATGCTCGCCTGCCACGGC +
Preference number: 4 (lower is better)
Translates to: WAHRPDGQQLVCPSLRALCAPRC*MLACHG
Trigger: GCCGTGGCAGGCGAGCATCCAGCATCGTGGGGCACA...CAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCCCTGGTGTCAAACTGGCAGTGCCCTCCTaGGGAAGCAGTGCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AVVPVSSKPAMEDLPGVKLAVPS*GSSAPL
Trigger: CAGCGGCGCACTGCTTCCCCAGGAGGGCACTGCCAG...TTTGACACCAGGGAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR CCA 90 bp GCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATCACGCGGTACTCAGCTaGCAGTGCCCTCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: AHHCVPCAQPWPGPRKVNHAVLS*QCPPGE
Trigger: TTCCCCAGGAGGGCACTGCCAGCTGAGTACCGCGTG...ATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR CCA 90 bp AGGCCGCTCATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCAGACCCCTGGACGGTTaGGCAGGGCACAACCCTTGC +
Preference number: 4 (lower is better)
Translates to: RPLMAVVPVSSKPAMEDLRPLDG*AGHNPC
Trigger: GCAAGGGTTGTGCCCTGCCCAACCGTCCAGGGGTCT...GAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp AATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAACTGGTGTAGACCCCTaGACGGTTGGGCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: NWFAHHCVPCAQPWPGPRTGVDP*TVGQGT
Trigger: TGTGCCCTGCCCAACCGTCCAGGGGTCTACACCAGT...TCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp AGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAGAGGCAGAAGGGATGTaGGGTATAGGCAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SNWFAHHCVPCAQPWPGPEAEGM*GIGRCL
Trigger: CAGGCACCTGCCTATACCCCACATCCCTTCTGCCTC...TGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp ATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAACCTTGCGCCCAGCCCTaGCCAGGGCCAAGAAAAGTA +
Preference number: 4 (lower is better)
Translates to: IGLPITACLAPSPGQGQEPCAQP*PGPRKV
Trigger: TACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGG...TTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp AGGAGAAAGAGGAGCCTAAGTCCCAGCCCTCCCAGGACTTCAGTTCTCAGGGTTGGGGACTCCGGAGGCTaGGGAGGCTGGGTGCACACC +
Preference number: 4 (lower is better)
Translates to: RRKRSLSPSPPRTSVLRVGDSGG*GGWVHT
Trigger: GGTGTGCACCCAGCCTCCCCAGCCTCCGGAGTCCCC...AACCCTGAGAACTGAAGTCCTGGGAGGGCTGGGACTTAGGCTCCTCTTTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576886.5
3UTR CAA 72 bp AAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTaGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KMGTQARWAAIG*PITACLAPSPG
Trigger: GCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR TCA 90 bp GCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCCCTGGTGTCAAAGATGAACCAGGAGGCTaGGGGACCCCAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AVVPVSSKPAMEDLPGVKDEPGG*GTPAAG
Trigger: GCCAGCTGCTGGGGTCCCTCAGCCTCCTGGTTCATC...TTTGACACCAGGGAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp TGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTTGCTGGATGCTCGCCTaGCACGGCCACTCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: CAQPWPGPRKVNTSQEGSCWMLA*HGHSPS
Trigger: GGACGGAGAGTGGCCGTGGCAGGCGAGCATCCAGCA...ACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp TTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAGTACTCAGCTGGCAGTaGCCTCCTGGGGAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: FAHHCVPCAQPWPGPRKVVLSWQ*PPGEAV
Trigger: CACTGCTTCCCCAGGAGGGCACTGCCAGCTGAGTAC...TACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR GCA 90 bp CGGCGGGGCTCTTATCTGGAGGCTGGGGAAGAACTTACTTCCCAGCTCCTTCAGTGGTTTGCCCATCACTaGGTGCCTTGCGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RRGSYLEAGEELTSQLLQWFAHH*VPCAQP
Trigger: GGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCA...CTGAAGGAGCTGGGAAGTAAGTTCTTCCCCAGCCTCCAGATAAGAGCCCCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp CAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGCAGAATCCAGTGCCTTaGGGCTGTGGGTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QLLQGAARIQCLAAVGLRQNPVP*GCGSEG
Trigger: ACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTG...CCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp TGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGGTTCCGATTCCCTGCCGGCTCCTTCAGGGTGCTaGCAGAATCCAGTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: CQNPVPCGCGSEGSDSLPAPSGC*QNPVPC
Trigger: GCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGC...CGGCAGGGAATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp TTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTACTGGTCTGGGCTCCCTaGAGAGCACACGTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: FAHHCVPCAQPWPGPRKVLVWAP*RAHVAG
Trigger: TCCAGCAACGTGTGCTCTGCAGGGAGCCCAGACCAG...TACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570702.5
CDS-3UTR CCA 90 bp GATGGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGAAGGAGCAGGACCTaGAGACAGGAAACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: DGQQLVCPSLRALRPALARRSRT*RQETPL
Trigger: GAGAGGGGTTTCCTGTCTCCAGGTCCTGCTCCTTCT...GGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp TGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTTGTGCCCCACGATGCTaGATGCTCGCCTGCCACGGC +
Preference number: 4 (lower is better)
Translates to: CAQPWPGPRKVNTSQEGSCAPRC*MLACHG
Trigger: GCCGTGGCAGGCGAGCATCCAGCATCGTGGGGCACA...ACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp CTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCGGCAGGCAGACGGGTTaGACGCGAGCGCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LQKKMGTQARWAAIGLPIGRQTG*TRALRG
Trigger: GCCCCTGAGCGCTCGCGTCCAACCCGTCTGCCTGCC...GATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR CCA 90 bp AAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGGGACTCATGTGGGAGGGGCACTCCTaGGCGGAGGCTGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KVNTSQEGSGECDSLGLMWEGHS*AEAAPA
Trigger: GGCTGGGGCAGCCTCCGCCCAGGAGTGCCCCTCCCA...CATGAGTCCCAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR CCA 90 bp TGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTCCCCCAGAATCACCCTaGCAGGCGTCCTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: CAQPWPGPRKVNTSQEGSPPESP*QASLWP
Trigger: GGGCCACAAGGACGCCTGCCAGGGTGATTCTGGGGG...ACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR CCA 90 bp CGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTGGAGACCCCTGGACGGTTaGGCAGGGCACAACCCTTGC +
Preference number: 4 (lower is better)
Translates to: RPALARAKKSKYKPGREWRPLDG*AGHNPC
Trigger: GCAAGGGTTGTGCCCTGCCCAACCGTCCAGGGGTCT...CCACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp CCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGAGGCAGAAGGGATGTaGGGTATAGGCAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PAPSGCCQNPVPCGCGSEEAEGM*GIGRCL
Trigger: CAGGCACCTGCCTATACCCCACATCCCTTCTGCCTC...CTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGCTCATGGCAGATTCCTaGATGAGGGTTGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: GQQLVCPSLRALRPALARLMADS*MRVGGV
Trigger: GACTCCACCAACCCTCATCCAGGAATCTGCCATGAG...CCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp ATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAGGCACACAGGCCAGATaGGCAGCAATTGGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: IGLPITACLAPSPGQGQEGTQAR*AAIGLP
Trigger: GGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCC...TTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp TGGCCACACTGGTGTAGACCCCTGGACGGTTGGGCAGGGCACAACCCTTGCCCCCTGGACTTATCCTGGTaGCCCAGGCTGTATACCCTT +
Preference number: 4 (lower is better)
Translates to: WPHWCRPLDGWAGHNPCPLDLSW*PRLYTL
Trigger: AAGGGTATACAGCCTGGGCCACCAGGATAAGTCCAG...GGGGCAAGGGTTGTGCCCTGCCCAACCGTCCAGGGGTCTACACCAGTGTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR CCA 90 bp GGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGTTCTGGACTTATCCTaGTGGCCCAGGCTGTATACC +
Preference number: 4 (lower is better)
Translates to: GQQLVCPSLRALRPALARVLDLS*WPRLYT
Trigger: GGTATACAGCCTGGGCCACCAGGATAAGTCCAGAAC...CCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR TCA 90 bp ATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGCTGACGCGAGCCTaGATCCAGGGGCTATATGTG +
Preference number: 4 (lower is better)
Translates to: IGLPITACLAPSPGQGQEKLTRA*IQGLYV
Trigger: CACATATAGCCCCTGGATTCAGGCTCGCGTCAGCTT...TTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR TCA 90 bp CAGCTGGCTCCAGGTCAGCCTCACCGGCTAGCATTAGAAGCTGACGCGAGCCTGTGGCAGATTCCTGGATaGGGGTTGGTGGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: QLAPGQPHRLALEADASLWQIPG*GLVESE
Trigger: CTCTGACTCCACCAACCCTCATCCAGGAATCTGCCA...CAGGCTCGCGTCAGCTTCTAATGCTAGCCGGTGAGGCTGACCTGGAGCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR GCA 90 bp TGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGGCTGCCAGAATCCAGTaGCTTGCGGCTGTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: CVPCAQPWPGPRKVNTSQAARIQ*LAAVGL
Trigger: CAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGC...CTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp CATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCCCTGGTGTCCGTCACCCCCTCCGTaGTCCTTCTGTCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: HGCGPRVLKASYGGSPWCPSPPP*SFCLSS
Trigger: TGAGGACAGACAGAAGGACCACGGAGGGGGTGACGG...ACACCAGGGAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000576886.5
CDS-3UTR CCA 90 bp TTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAAGAGAGGAGAGTCCTaGCCCAGGGGCACCAATCCT +
Preference number: 4 (lower is better)
Translates to: FAHHCVPCAQPWPGPRKVKRGES*PRGTNP
Trigger: AGGATTGGTGCCCCTGGGCCAGGACTCTCCTCTCTT...TACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000576886.5
CDS-3UTR CCA 90 bp GCTCTTAGAGGCCGCTCATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGTCTTCAAGGCTGGGCTaGGTAAGGGTGGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: ALRGRSWLWSPCPQSQLWSSRLG*VRVALP
Trigger: AGGCAGTGCCACCCTTACCCAGCCCAGCCTTGAAGA...CCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCTCTAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp AATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAGAAGGAGCAGGACCTaGAGACAGGAAACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: NWFAHHCVPCAQPWPGPRRRSRT*RQETPL
Trigger: GAGAGGGGTTTCCTGTCTCCAGGTCCTGCTCCTTCT...TCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGACAATGCGCTCAGCCTaGGGCACGTCCGCGCCCACG +
Preference number: 4 (lower is better)
Translates to: GPRKVNTSQEGSGECDSLTMRSA*GTSAPT
Trigger: CGTGGGCGCGGACGTGCCCCAGGCTGAGCGCATTGT...CAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GGGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCCCCCAGAATCACCCTaGCAGGCGTCCTTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GKNLLPSSFRVLPESSALPPESP*QASLWP
Trigger: GGGCCACAAGGACGCCTGCCAGGGTGATTCTGGGGG...CAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR CCA 90 bp CCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGTCCAGGGGCTATATGTaGCCACACTGGTGTAGACCC +
Preference number: 4 (lower is better)
Translates to: PAPSGCCQNPVPCGCGSESRGYM*PHWCRP
Trigger: GGGTCTACACCAGTGTGGCCACATATAGCCCCTGGA...CTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp CCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGGGAGTGTGACTCCCTaGGACTCATGGCAGATTCCT +
Preference number: 4 (lower is better)
Translates to: PAPSGCCQNPVPCGCGSEGSVTP*DSWQIP
Trigger: AGGAATCTGCCATGAGTCCCAGGGAGTCACACTCCC...CTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp TCAGTTCTCAGGGTTCCAGACCCCTGGCGTGGTGCCTCTAGGTTGGAGGCCAGGGGGAGTGTGACTCCCTaGGACTCATGGCAGATTCCT +
Preference number: 4 (lower is better)
Translates to: SVLRVPDPWRGASRLEARGSVTP*DSWQIP
Trigger: AGGAATCTGCCATGAGTCCCAGGGAGTCACACTCCC...CCTGGCCTCCAACCTAGAGGCACCACGCCAGGGGTCTGGAACCCTGAGAACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR CCA 90 bp AGCAATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCACAGATGGGCAGCAATTaGTTTGCCCATCACTGCGTG +
Preference number: 4 (lower is better)
Translates to: SNWFAHHCVPCAQPWPGPQMGSN*FAHHCV
Trigger: CACGCAGTGATGGGCAAACCAATTGCTGCCCATCTG...TGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GCTCTTAGAGGCCGCTCATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGGCTCCTGGTGGGTTCTaGACTTATCCTGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ALRGRSWLWSPCPQSQLWAPGGF*TYPGGP
Trigger: TGGGCCACCAGGATAAGTCCAGAACCCACCAGGAGC...CCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCTCTAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR CCA 90 bp TCAGTTCTCAGGGTTCCAGACCCCTGGCGTGGTGCCTCTAGGTTGGAGGCCAGGGTCCTCAGCTCCTGGTaGGTTCTGGACTTATCCTGG +
Preference number: 4 (lower is better)
Translates to: SVLRVPDPWRGASRLEARVLSSW*VLDLSW
Trigger: CCAGGATAAGTCCAGAACCCACCAGGAGCTGAGGAC...CCTGGCCTCCAACCTAGAGGCACCACGCCAGGGGTCTGGAACCCTGAGAACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR CCA 90 bp CGGCGGGGCTCTTATCTGGAGGCTGGGGAAGAACTTACTTCCCAGCTCCTTCAGCTAGGGCTTGGACTCTaGTCTGGGCTCCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RRGSYLEAGEELTSQLLQLGLGL*SGLPAE
Trigger: CTCTGCAGGGAGCCCAGACCAGAGTCCAAGCCCTAG...CTGAAGGAGCTGGGAAGTAAGTTCTTCCCCAGCCTCCAGATAAGAGCCCCGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570702.5
CDS-3UTR TCA 90 bp AGGCCGCTCATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCAAGCTGACGCGAGCCTaGATCCAGGGGCTATATGTG +
Preference number: 4 (lower is better)
Translates to: RPLMAVVPVSSKPAMEDLKLTRA*IQGLYV
Trigger: CACATATAGCCCCTGGATTCAGGCTCGCGTCAGCTT...GAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR TCA 90 bp CTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCGATGAACCAGGAGGCTaGGGGACCCCAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LQKKMGTQARWAAIGLPIDEPGG*GTPAAG
Trigger: GCCAGCTGCTGGGGTCCCTCAGCCTCCTGGTTCATC...GATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR TCA 90 bp TACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTGGCAGATTCCTGGATaGGGGTTGGTGGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: YFPAPSGCCQNPVPCGCGWQIPG*GLVESE
Trigger: CTCTGACTCCACCAACCCTCATCCAGGAATCTGCCA...CCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR TCA 90 bp TGGGGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTAGGGAGTGGGGAGTGTaGCTCCCTGGGACTCATGGC +
Preference number: 4 (lower is better)
Translates to: WGRTYFPAPSGCCQNPVPREWGV*LPGTHG
Trigger: GCCATGAGTCCCAGGGAGTCACACTCCCCACTCCCT...AGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp CTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCCCCCACGATGCTGGATaGTCGCCTGCCACGGCCACT +
Preference number: 4 (lower is better)
Translates to: LQKKMGTQARWAAIGLPIPHDAG*SPATAT
Trigger: AGTGGCCGTGGCAGGCGAGCATCCAGCATCGTGGGG...GATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp GCTCTTAGAGGCCGCTCATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGGGGCAGCAATTGGTTTaGCCATCACTGCGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ALRGRSWLWSPCPQSQLWGQQLV*PSLRAL
Trigger: CAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCC...CCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCTCTAAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp GCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCCCTGGTGTCAAAGCTGCCAGAATCCAGTaGCTTGCGGCTGTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: AVVPVSSKPAMEDLPGVKAARIQ*LAAVGL
Trigger: CAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGC...TTTGACACCAGGGAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp GATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTCCAGCTCCTTCAGGGTaGTGCCAGAATCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: DGHTGQMGSNWFAHHCVPPAPSG*CQNPVP
Trigger: AGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG...AGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATAGAAGGAGCAGGACCTaGAGACAGGAAACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: AHHCVPCAQPWPGPRKVNRRSRT*RQETPL
Trigger: GAGAGGGGTTTCCTGTCTCCAGGTCCTGCTCCTTCT...ATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp TGGGGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTAGACCCCTGGACGGTTaGGCAGGGCACAACCCTTGC +
Preference number: 4 (lower is better)
Translates to: WGRTYFPAPSGCCQNPVPRPLDG*AGHNPC
Trigger: GCAAGGGTTGTGCCCTGCCCAACCGTCCAGGGGTCT...AGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp AGGCCGCTCATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCTCCAGGGGCTATATGTaGCCACACTGGTGTAGACCC +
Preference number: 4 (lower is better)
Translates to: RPLMAVVPVSSKPAMEDLSRGYM*PHWCRP
Trigger: GGGTCTACACCAGTGTGGCCACATATAGCCCCTGGA...GAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp AATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGACAGATGGGCAGCAATTaGTTTGCCCATCACTGCGTG +
Preference number: 4 (lower is better)
Translates to: NWFAHHCVPCAQPWPGPRQMGSN*FAHHCV
Trigger: CACGCAGTGATGGGCAAACCAATTGCTGCCCATCTG...TCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp TACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGATCCTGAGCCTGAGTTaGGATGTCCTGGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: YFPAPSGCCQNPVPCGCGILSLS*DVLGPG
Trigger: TCCAGGACCCAGGACATCCCAACTCAGGCTCAGGAT...CCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR GCA 90 bp GGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGGGGCTGCCCGCAGGCTaGAGACTTCCTTCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GPRKVNTSQEGSGECDSLGLPAG*RLPSLS
Trigger: ACTCAGGGAAGGAAGTCTGCAGCCTGCGGGCAGCCC...CAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp AAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGGGACTCATGTGCTGGATGCTCGCCTaGCACGGCCACTCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: KVNTSQEGSGECDSLGLMCWMLA*HGHSPS
Trigger: GGACGGAGAGTGGCCGTGGCAGGCGAGCATCCAGCA...CATGAGTCCCAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp GCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCCCTGGTGTCAAATGGGGTATAGGCAGGTaGCTGGATGAACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AVVPVSSKPAMEDLPGVKWGIGR*LDEPGG
Trigger: GCCTCCTGGTTCATCCAGGCACCTGCCTATACCCCA...TTTGACACCAGGGAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp TGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTGCTCCTTCAGGGTGCTaGCAGAATCCAGTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: CAQPWPGPRKVNTSQEGSAPSGC*QNPVPC
Trigger: GCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGC...ACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp GCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCCCTGGTGTCAAACTGCAGAGCACACGTTaGTGGAGCTTCTGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: AVVPVSSKPAMEDLPGVKLQSTR*WSFCAP
Trigger: TGGAGCGCAGAAGCTCCAGCAACGTGTGCTCTGCAG...TTTGACACCAGGGAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570702.5
CDS-3UTR CCA 90 bp TGGGGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTGCACTGCCTAGGGCTTaGACTCTGGTCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: WGRTYFPAPSGCCQNPVPALPRA*TLVWSQ
Trigger: CTGGCTCCAGACCAGAGTCCAAGCCCTAGGCAGTGC...AGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000576886.5
CDS-3UTR CCA 90 bp ACTTTCTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCCCAACGATCCGACTaGACATGCGGGGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: TFSRKRWAHRPDGQQLVCPQRSD*TCGAAR
Trigger: GCGGGCAGCCCCGCATGTCCAGTCGGATCGTTGGGG...GCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp TGGGGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTACTGGTGTAGACCCCTaGACGGTTGGGCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: WGRTYFPAPSGCCQNPVPTGVDP*TVGQGT
Trigger: TGTGCCCTGCCCAACCGTCCAGGGGTCTACACCAGT...AGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp AGGCCGCTCATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCTATATGTGGCCACACTaGTGTAGACCCCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: RPLMAVVPVSSKPAMEDLYMWPH*CRPLDG
Trigger: ACCGTCCAGGGGTCTACACCAGTGTGGCCACATATA...GAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp TGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGTCCAGGGGCTATATGTaGCCACACTGGTGTAGACCC +
Preference number: 4 (lower is better)
Translates to: WAHRPDGQQLVCPSLRALSRGYM*PHWCRP
Trigger: GGGTCTACACCAGTGTGGCCACATATAGCCCCTGGA...CAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGGTTCCGATTCCCTGCTTCTCCAGAAAAAGATaGGCACACAGGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: AARIQCLAAVGLRVPIPCFSRKR*AHRPDG
Trigger: CCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAA...GCAGGGAATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGGTTCCGATTCCCTGCCACCACCCAGATATTTaGGCATCCTTGGTCTCGACA +
Preference number: 4 (lower is better)
Translates to: AARIQCLAAVGLRVPIPCHHPDI*ASLVST
Trigger: TGTCGAGACCAAGGATGCCCAAATATCTGGGTGGTG...GCAGGGAATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR CCA 90 bp GCTCTTAGAGGCCGCTCATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGTCTGTCCTCAGCTCCTaGTGGGTTCTGGACTTATCC +
Preference number: 4 (lower is better)
Translates to: ALRGRSWLWSPCPQSQLWSVLSS*WVLDLS
Trigger: GGATAAGTCCAGAACCCACCAGGAGCTGAGGACAGA...CCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCTCTAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR TCA 90 bp TGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTAAGCTGACGCGAGCCTaGATCCAGGGGCTATATGTG +
Preference number: 4 (lower is better)
Translates to: CAQPWPGPRKVNTSQEGSKLTRA*IQGLYV
Trigger: CACATATAGCCCCTGGATTCAGGCTCGCGTCAGCTT...ACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp AAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGGGACTCATGGGGCTGCCCGCAGGCTaGAGACTTCCTTCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: KVNTSQEGSGECDSLGLMGLPAG*RLPSLS
Trigger: ACTCAGGGAAGGAAGTCTGCAGCCTGCGGGCAGCCC...CATGAGTCCCAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp AAGTCACAACTTTGTAGGTCAGGAGTGGCTCAGCTAGGTTCTCTGCTTAGGGTCCTGGACATGCGGGGCTaGCCGCAGGCTGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: KSQLCRSGVAQLGSLLRVLDMRG*PQAADF
Trigger: GAAGTCTGCAGCCTGCGGGCAGCCCCGCATGTCCAG...GACCCTAAGCAGAGAACCTAGCTGAGCCACTCCTGACCTACAAAGTTGTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp TGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTGGGCAGCAATTGGTTTaGCCATCACTGCGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CAQPWPGPRKVNTSQEGSGQQLV*PSLRAL
Trigger: CAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCC...ACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GGGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGAAGAGAGGAGAGTCCTaGCCCAGGGGCACCAATCCT +
Preference number: 4 (lower is better)
Translates to: GKNLLPSSFRVLPESSALKRGES*PRGTNP
Trigger: AGGATTGGTGCCCCTGGGCCAGGACTCTCCTCTCTT...CAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000576886.5
CDS-3UTR CCA 90 bp TGGGGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTGCTTGGACTCTGGTCTaGAGCCAGCAGGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: WGRTYFPAPSGCCQNPVPAWTLV*SQQGEE
Trigger: CTCTTCTCCCTGCTGGCTCCAGACCAGAGTCCAAGC...AGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000576886.5
CDS-3UTR CCA 90 bp GGGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGTCTTCAAGGCTGGGCTaGGTAAGGGTGGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: GKNLLPSSFRVLPESSALSSRLG*VRVALP
Trigger: AGGCAGTGCCACCCTTACCCAGCCCAGCCTTGAAGA...CAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GCTGTGAATCTGACTTTCTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCACGCGGTACTCAGCTaGCAGTGCCCTCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: AVNLTFSRKRWAHRPDGQHAVLS*QCPPGE
Trigger: TTCCCCAGGAGGGCACTGCCAGCTGAGTACCGCGTG...CTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAAAGTCAGATTCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR CCA 90 bp GGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGACTGGTGTAGACCCCTaGACGGTTGGGCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: GPRKVNTSQEGSGECDSLTGVDP*TVGQGT
Trigger: TGTGCCCTGCCCAACCGTCCAGGGGTCTACACCAGT...CAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp TGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGTATATGTGGCCACACTaGTGTAGACCCCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: CVPCAQPWPGPRKVNTSQYMWPH*CRPLDG
Trigger: ACCGTCCAGGGGTCTACACCAGTGTGGCCACATATA...CTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGAGGCAGAAGGGATGTaGGGTATAGGCAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GRTYFPAPSGCCQNPVPCEAEGM*GIGRCL
Trigger: CAGGCACCTGCCTATACCCCACATCCCTTCTGCCTC...GCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGAGGATCTCCCTGGTGTCAAAGGGAGTGTGACTCCCTaGGACTCATGGCAGATTCCT +
Preference number: 4 (lower is better)
Translates to: AVVPVSSKPAMEDLPGVKGSVTP*DSWQIP
Trigger: AGGAATCTGCCATGAGTCCCAGGGAGTCACACTCCC...TTTGACACCAGGGAGATCCTCCATAGCTGGCTTTGAGGACACGGGGACCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp TACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTTCTCCAGAAAAAGATaGGCACACAGGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: YFPAPSGCCQNPVPCGCGFSRKR*AHRPDG
Trigger: CCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAA...CCCACAGCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp TGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTCAGAGCACACGTTGCTaGAGCTTCTGCGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: CAQPWPGPRKVNTSQEGSQSTRC*SFCAPL
Trigger: CAATGGAGCGCAGAAGCTCCAGCAACGTGTGCTCTG...ACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570702.5
CDS-3UTR GCA 90 bp GGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGTGGGGTATAGGCAGGTaGCTGGATGAACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GPRKVNTSQEGSGECDSLWGIGR*LDEPGG
Trigger: GCCTCCTGGTTCATCCAGGCACCTGCCTATACCCCA...CAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp GGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGCCAGCTCCTTCAGGGTaGTGCCAGAATCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GPRKVNTSQEGSGECDSLPAPSG*CQNPVP
Trigger: AGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG...CAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp GGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGTATACCCTTCGTTCTaGCCAGGGCCCAGGTATGCA +
Preference number: 4 (lower is better)
Translates to: GRTYFPAPSGCCQNPVPCVYPSF*PGPRYA
Trigger: TGCATACCTGGGCCCTGGGCAGAACGAAGGGTATAC...GCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR CCA 90 bp GCTGTGAATCTGACTTTCTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCCTTGCGCCCAGCCCTaGCCAGGGCCAAGAAAAGTA +
Preference number: 4 (lower is better)
Translates to: AVNLTFSRKRWAHRPDGQPCAQP*PGPRKV
Trigger: TACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCAAGG...CTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAAAGTCAGATTCACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp TGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTCAGATGGGCAGCAATTaGTTTGCCCATCACTGCGTG +
Preference number: 4 (lower is better)
Translates to: CAQPWPGPRKVNTSQEGSQMGSN*FAHHCV
Trigger: CACGCAGTGATGGGCAAACCAATTGCTGCCCATCTG...ACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp TGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGATATTTGGGCATCCTTaGTCTCGACAGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WAHRPDGQQLVCPSLRALIFGHP*SRQKPW
Trigger: CCAGGGCTTCTGTCGAGACCAAGGATGCCCAAATAT...CAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR GCA 90 bp CTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCGGGCAGCAATTGGTTTaGCCATCACTGCGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LQKKMGTQARWAAIGLPIGQQLV*PSLRAL
Trigger: CAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCC...GATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp AAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGGGACTCATGCCAGCTCCTTCAGGGTaGTGCCAGAATCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: KVNTSQEGSGECDSLGLMPAPSG*CQNPVP
Trigger: AGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGG...CATGAGTCCCAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR GCA 90 bp GGGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGTTGCTGGAGCTTCTaGGCTCCATTGTTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GKNLLPSSFRVLPESSALRCWSF*APLFCP
Trigger: TGGACAGAACAATGGAGCGCAGAAGCTCCAGCAACG...CAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570702.5
CDS-3UTR CCA 90 bp AAGTCACAACTTTGTAGGTCAGGAGTGGCTCAGCTAGGTTCTCTGCTTAGGGTCCCGTCACCCCCTCCGTaGTCCTTCTGTCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: KSQLCRSGVAQLGSLLRVPSPPP*SFCLSS
Trigger: TGAGGACAGACAGAAGGACCACGGAGGGGGTGACGG...GACCCTAAGCAGAGAACCTAGCTGAGCCACTCCTGACCTACAAAGTTGTGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000576886.5
CDS-3UTR CCA 90 bp AAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGGGACTCATGTCTTCAAGGCTGGGCTaGGTAAGGGTGGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: KVNTSQEGSGECDSLGLMSSRLG*VRVALP
Trigger: AGGCAGTGCCACCCTTACCCAGCCCAGCCTTGAAGA...CATGAGTCCCAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp AAAGAGGAGCCTAAGTCCCAGCCCTCCCAGGACTTCAGTTCTCAGGGTTCCAGACTCATGGCAGATTCCTaGATGAGGGTTGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: KEEPKSQPSQDFSSQGSRLMADS*MRVGGV
Trigger: GACTCCACCAACCCTCATCCAGGAATCTGCCATGAG...TCTGGAACCCTGAGAACTGAAGTCCTGGGAGGGCTGGGACTTAGGCTCCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR CCA 90 bp AAGTCACAACTTTGTAGGTCAGGAGTGGCTCAGCTAGGTTCTCTGCTTAGGGTCGCTTGGACTCTGGTCTaGGCTCCCTGCAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: KSQLCRSGVAQLGSLLRVAWTLV*APCRAH
Trigger: GTGTGCTCTGCAGGGAGCCCAGACCAGAGTCCAAGC...GACCCTAAGCAGAGAACCTAGCTGAGCCACTCCTGACCTACAAAGTTGTGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570702.5
CDS-3UTR CCA 90 bp CTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCCTCATGGCAGATTCCTaGATGAGGGTTGGTGGAGTC +
Preference number: 4 (lower is better)
Translates to: LQKKMGTQARWAAIGLPILMADS*MRVGGV
Trigger: GACTCCACCAACCCTCATCCAGGAATCTGCCATGAG...GATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp AAGTCACAACTTTGTAGGTCAGGAGTGGCTCAGCTAGGTTCTCTGCTTAGGGTCGGCACACAGGCCAGATaGGCAGCAATTGGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: KSQLCRSGVAQLGSLLRVGTQAR*AAIGLP
Trigger: GGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCC...GACCCTAAGCAGAGAACCTAGCTGAGCCACTCCTGACCTACAAAGTTGTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GGGAAGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGTTCTCCAGAAAAAGATaGGCACACAGGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: GKNLLPSSFRVLPESSALFSRKR*AHRPDG
Trigger: CCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAA...CAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR TCA 90 bp ACTTTCTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCTGGCAGATTCCTGGATaGGGGTTGGTGGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: TFSRKRWAHRPDGQQLVCWQIPG*GLVESE
Trigger: CTCTGACTCCACCAACCCTCATCCAGGAATCTGCCA...GCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp GCTGTGAATCTGACTTTCTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGTATATGTGGCCACACTaGTGTAGACCCCTGGACGGT +
Preference number: 4 (lower is better)
Translates to: AVNLTFSRKRWAHRPDGQYMWPH*CRPLDG
Trigger: ACCGTCCAGGGGTCTACACCAGTGTGGCCACATATA...CTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAAAGTCAGATTCACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp AATCTCTGTCATGCTGTGAATCTGACTTTCTCCAGAAAAAGATGGGCACACAGGGCACTGCCTAGGGCTTaGACTCTGGTCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: NLCHAVNLTFSRKRWAHRALPRA*TLVWSQ
Trigger: CTGGCTCCAGACCAGAGTCCAAGCCCTAGGCAGTGC...CCTGTGTGCCCATCTTTTTCTGGAGAAAGTCAGATTCACAGCATGACAGAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000576886.5
CDS-3UTR GCA 90 bp AATCTCTGTCATGCTGTGAATCTGACTTTCTCCAGAAAAAGATGGGCACACAGGTGGGGTATAGGCAGGTaGCTGGATGAACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: NLCHAVNLTFSRKRWAHRWGIGR*LDEPGG
Trigger: GCCTCCTGGTTCATCCAGGCACCTGCCTATACCCCA...CCTGTGTGCCCATCTTTTTCTGGAGAAAGTCAGATTCACAGCATGACAGAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CCA 90 bp AATCTCTGTCATGCTGTGAATCTGACTTTCTCCAGAAAAAGATGGGCACACAGGGGCACACAGGCCAGATaGGCAGCAATTGGTTTGCCC +
Preference number: 4 (lower is better)
Translates to: NLCHAVNLTFSRKRWAHRGTQAR*AAIGLP
Trigger: GGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCC...CCTGTGTGCCCATCTTTTTCTGGAGAAAGTCAGATTCACAGCATGACAGAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS CCA 90 bp GCAGCAGCACCCGTCGCACGGGCACCGAGAGCGTGCGGGGCGAGGTaGAGCCCAGACGCAGCGCCCCCAGGCGCACGCGGTACTCAGCTG +
Preference number: 5 (lower is better)
Translates to: AAAPVARAPRACGAR*SPDAAPPGARGTQL
Trigger: CAGCTGAGTACCGCGTGCGCCTGGGGGCGCTGCGTCTGGGCTCCACCTCGCCCCGCACGCTCTCGGTGCCCGTGCGACGGGTGCTGCTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000571674.1
ENST00000682474.1
CDS GCA 90 bp CAGCCTGGGGCACGTCCGCGCCCACGTGGTAGAGGCCGTCGCAGGTaGGCGAGTCCAGCAGCGGCACCCTTACTCCTTGTAGCGGTCGCC +
Preference number: 5 (lower is better)
Translates to: QPGARPRPRGRGRRR*ASPAAAPLLLVAVA
Trigger: GGCGACCGCTACAAGGAGTAAGGGTGCCGCTGCTGGACTCGCGCACCTGCGACGGCCTCTACCACGTGGGCGCGGACGTGCCCCAGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000571674.1
ENST00000576886.5
ENST00000682474.1
CDS CCA 90 bp ACGGCCACTCTCCGTCCCGGCCATCCCGGCCCCCAACGATCCGACTaGACATGCGGGGCTGCCCGCAGGCCAGCACCAGAAGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: TATLRPGHPGPQRSD*TCGAARRPAPEGAG
Trigger: TCCTGCTCCTTCTGGTGCTGGCCTGCGGGCAGCCCCGCATGTCCAGTCGGATCGTTGGGGGCCGGGATGGCCGGGACGGAGAGTGGCCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571674.1
CDS GCA 90 bp TGTGGCCCTGGGGGTAGCCGGCACACAGACTCCCAGGCAGCACAATaGGCTCAGCCTGGGGCACGTCCGCGCCCACGTGGTAGAGGCCGT +
Preference number: 5 (lower is better)
Translates to: CGPGGSRHTDSQAAQ*AQPGARPRPRGRGR
Trigger: ACGGCCTCTACCACGTGGGCGCGGACGTGCCCCAGGCTGAGCGCATTGTGCTGCCTGGGAGTCTGTGTGCCGGCTACCCCCAGGGCCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000571674.1
ENST00000576886.5
ENST00000682474.1
CDS CCA 90 bp ACGGCCACTCTCCGTCCCGGCCATCCCGGCCCCCAACGATCCGACTaGACATGCGGGGCTGCCCGCAGGCTGCAGACTTCCTTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: TATLRPGHPGPQRSD*TCGAARRLQTSFPE
Trigger: CTCAGGGAAGGAAGTCTGCAGCCTGCGGGCAGCCCCGCATGTCCAGTCGGATCGTTGGGGGCCGGGATGGCCGGGACGGAGAGTGGCCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
ENST00000682474.1
CDS CCA 90 bp CTGGGCTGGGTAAGGGTGGCACTGCCTAGGGCTTGGACTCTGGTCTaGAGCCAGCAGGGAGAAGAGAGGAGAGTCCTGGCCCAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: LGWVRVALPRAWTLV*SQQGEERRVLAQGH
Trigger: GTGCCCCTGGGCCAGGACTCTCCTCTCTTCTCCCTGCTGGCTCCAGACCAGAGTCCAAGCCCTAGGCAGTGCCACCCTTACCCAGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000576886.5
CDS-3UTR CAA 90 bp TGCGCCCAGCCCTGGCCAGGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTGGGCAGGCAGACGGGTaGGACGCGAGCGCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: CAQPWPGPRKVNTSQEGSGQADG*DASAQG
Trigger: CCCCTGAGCGCTCGCGTCCAACCCGTCTGCCTGCCC...ACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCCTGGCCAGGGCTGGGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR CAA 90 bp TGGCCACACTGGTGTAGACCCCTGGACGGTTGGGCAGGGCACAACCCTTGCCCCGATCCTGAGCCTGAGTaGGGATGTCCTGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: WPHWCRPLDGWAGHNPCPDPEPE*GCPGSW
Trigger: CCAGGACCCAGGACATCCCAACTCAGGCTCAGGATC...GGGGCAAGGGTTGTGCCCTGCCCAACCGTCCAGGGGTCTACACCAGTGTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS CCA 90 bp CCCCCTCCGTGGTCCTTCTGTCTGTCCTCAGCTCCTGGTGGGTTCTaGACTTATCCTGGTGGCCCAGGCTGTATACCCTTCGTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: PPPWSFCLSSAPGGF*TYPGGPGCIPFVLP
Trigger: GGGCAGAACGAAGGGTATACAGCCTGGGCCACCAGGATAAGTCCAGAACCCACCAGGAGCTGAGGACAGACAGAAGGACCACGGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS CCA 90 bp CCCGTCACCCCCTCCGTGGTCCTTCTGTCTGTCCTCAGCTCCTGGTaGGTTCTGGACTTATCCTGGTGGCCCAGGCTGTATACCCTTCGT +
Preference number: 5 (lower is better)
Translates to: PVTPSVVLLSVLSSW*VLDLSWWPRLYTLR
Trigger: ACGAAGGGTATACAGCCTGGGCCACCAGGATAAGTCCAGAACCCACCAGGAGCTGAGGACAGACAGAAGGACCACGGAGGGGGTGACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS CCA 90 bp CAGCCCGTCACCCCCTCCGTGGTCCTTCTGTCTGTCCTCAGCTCCTaGTGGGTTCTGGACTTATCCTGGTGGCCCAGGCTGTATACCCTT +
Preference number: 5 (lower is better)
Translates to: QPVTPSVVLLSVLSS*WVLDLSWWPRLYTL
Trigger: AAGGGTATACAGCCTGGGCCACCAGGATAAGTCCAGAACCCACCAGGAGCTGAGGACAGACAGAAGGACCACGGAGGGGGTGACGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR CAA 90 bp TGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCACTGCGTGCCTTGCCTGCAGAGCACACGTaGCTGGAGCTTCTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: WAHRPDGQQLVCPSLRALPAEHT*LELLRS
Trigger: GGAGCGCAGAAGCTCCAGCAACGTGTGCTCTGCAGG...CAAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570702.5
CDS CCA 90 bp GTCCTTCTGTCTGTCCTCAGCTCCTGGTGGGTTCTGGACTTATCCTaGTGGCCCAGGCTGTATACCCTTCGTTCTGCCCAGGGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: VLLSVLSSWWVLDLS*WPRLYTLRSAQGPG
Trigger: ACCTGGGCCCTGGGCAGAACGAAGGGTATACAGCCTGGGCCACCAGGATAAGTCCAGAACCCACCAGGAGCTGAGGACAGACAGAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR CAA 90 bp ACTTTCTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCGGGCAGGCAGACGGGTaGGACGCGAGCGCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: TFSRKRWAHRPDGQQLVCGQADG*DASAQG
Trigger: CCCCTGAGCGCTCGCGTCCAACCCGTCTGCCTGCCC...GCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAGAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000570702.5
CDS-3UTR CAA 90 bp GCTGCCAGAATCCAGTGCCTTGCGGCTGTGGGTCTGAGGGTTCCGATTCCCTGCTGGGCAGCAATTGGTTaGCCCATCACTGCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: AARIQCLAAVGLRVPIPCWAAIG*PITACL
Trigger: AAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCA...GCAGGGAATCGGAACCCTCAGACCCACAGCCGCAAGGCACTGGATTCTGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CAA 90 bp CAGCTGGCTCCAGGTCAGCCTCACCGGCTAGCATTAGAAGCTGACGCGAGCCTGCCACCACCCAGATATTaGGGCATCCTTGGTCTCGAC +
Preference number: 5 (lower is better)
Translates to: QLAPGQPHRLALEADASLPPPRY*GILGLD
Trigger: GTCGAGACCAAGGATGCCCAAATATCTGGGTGGTGG...CAGGCTCGCGTCAGCTTCTAATGCTAGCCGGTGAGGCTGACCTGGAGCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS GCA 90 bp GGTTCTGGACTTATCCTGGTGGCCCAGGCTGTATACCCTTCGTTCTaGCCAGGGCCCAGGTATGCAGCACCCACCACCCAGATATTTGGG +
Preference number: 5 (lower is better)
Translates to: GSGLILVAQAVYPSF*PGPRYAAPTTQIFG
Trigger: CCCAAATATCTGGGTGGTGGGTGCTGCATACCTGGGCCCTGGGCAGAACGAAGGGTATACAGCCTGGGCCACCAGGATAAGTCCAGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS CCA 90 bp ACCTGGAGACAGGAAACCCCTCTCATTCTGTCTTCAAGGCTGGGCTaGGTAAGGGTGGCACTGCCTAGGGCTTGGACTCTGGTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: TWRQETPLILSSRLG*VRVALPRAWTLVWS
Trigger: GCTCCAGACCAGAGTCCAAGCCCTAGGCAGTGCCACCCTTACCCAGCCCAGCCTTGAAGACAGAATGAGAGGGGTTTCCTGTCTCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000576886.5
CDS CCA 90 bp CTTCTGTCTGTCCTCAGCTCCTGGTGGGTTCTGGACTTATCCTGGTaGCCCAGGCTGTATACCCTTCGTTCTGCCCAGGGCCCAGGTATG +
Preference number: 5 (lower is better)
Translates to: LLSVLSSWWVLDLSW*PRLYTLRSAQGPGM
Trigger: CATACCTGGGCCCTGGGCAGAACGAAGGGTATACAGCCTGGGCCACCAGGATAAGTCCAGAACCCACCAGGAGCTGAGGACAGACAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS CCA 90 bp ACCTGGAGACAGGAAACCCCTCTCATTCTGTCTTCAAGGCTGGGCTaGGTAAGGGTGGCACTGCCTAGGGCTTGGACTCTGGTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: TWRQETPLILSSRLG*VRVALPRAWTLVWA
Trigger: AGCCCAGACCAGAGTCCAAGCCCTAGGCAGTGCCACCCTTACCCAGCCCAGCCTTGAAGACAGAATGAGAGGGGTTTCCTGTCTCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570702.5
CDS-3UTR CAA 90 bp GCTCTTAGAGGCCGCTCATGGCTGTGGTCCCCGTGTCCTCAAAGCCAGCTATGGTGGGCAGCAATTGGTTaGCCCATCACTGCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: ALRGRSWLWSPCPQSQLWWAAIG*PITACL
Trigger: AAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCA...CCATAGCTGGCTTTGAGGACACGGGGACCACAGCCATGAGCGGCCTCTAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS CCA 90 bp ACCTGGAGACAGGAAACCCCTCTCATTCTGTCTTCAAGGCTGGGCTaGGTAAGGGTGGCACTGCCTAGGGCTTGGACTCTGGTCCTCACA +
Preference number: 5 (lower is better)
Translates to: TWRQETPLILSSRLG*VRVALPRAWTLVLT
Trigger: TGTGAGGACCAGAGTCCAAGCCCTAGGCAGTGCCACCCTTACCCAGCCCAGCCTTGAAGACAGAATGAGAGGGGTTTCCTGTCTCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682474.1
CDS-3UTR CAA 90 bp ATTGGTTTGCCCATCACTGCGTGCCTTGCGCCCAGCCCTGGCCAGGGCCAAGAAAGCTTCTGCGCTCCATaGTTCTGTCCAGAAATCCCA +
Preference number: 5 (lower is better)
Translates to: IGLPITACLAPSPGQGQESFCAP*FCPEIP
Trigger: TGGGATTTCTGGACAGAACAATGGAGCGCAGAAGCT...TTCTTGGCCCTGGCCAGGGCTGGGCGCAAGGCACGCAGTGATGGGCAAACCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570702.5
CDS GCA 90 bp GACTCTGGTCTGGGCTCCCTGCAGAGCACACGTTGCTGGAGCTTCTaGGCTCCATTGTTCTGTCCAGAAATCCCATCTCAGACGGAAGTC +
Preference number: 5 (lower is better)
Translates to: DSGLGSLQSTRCWSF*APLFCPEIPSQTEV
Trigger: GACTTCCGTCTGAGATGGGATTTCTGGACAGAACAATGGAGCGCAGAAGCTCCAGCAACGTGTGCTCTGCAGGGAGCCCAGACCAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570702.5
CDS-3UTR CAA 90 bp AGAACTTACTTCCCAGCTCCTTCAGGGTGCTGCCAGAATCCAGTGCCTTGCGGCGATATTTGGGCATCCTaGGTCTCGACAGAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: RTYFPAPSGCCQNPVPCGDIWAS*VSTEAL
Trigger: CAGGGCTTCTGTCGAGACCAAGGATGCCCAAATATC...GCCGCAAGGCACTGGATTCTGGCAGCACCCTGAAGGAGCTGGGAAGTAAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS-3UTR CAA 90 bp CTCCAGAAAAAGATGGGCACACAGGCCAGATGGGCAGCAATTGGTTTGCCCATCTGGGCAGCAATTGGTTaGCCCATCACTGCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: LQKKMGTQARWAAIGLPIWAAIG*PITACL
Trigger: AAGGCACGCAGTGATGGGCAAACCAATTGCTGCCCA...GATGGGCAAACCAATTGCTGCCCATCTGGCCTGTGTGCCCATCTTTTTCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CAA 90 bp GGGCCAAGAAAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGCCAGATGGGCAGCAATaGGTTTGCCCATCACTGCGT +
Preference number: 5 (lower is better)
Translates to: GPRKVNTSQEGSGECDSLPDGQQ*VCPSLR
Trigger: ACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGG...CAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTTTCTTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS-3UTR CAA 90 bp AAAGTAAATACAAGCCAGGAAGGGAGTGGGGAGTGTGACTCCCTGGGACTCATGCCAGATGGGCAGCAATaGGTTTGCCCATCACTGCGT +
Preference number: 5 (lower is better)
Translates to: KVNTSQEGSGECDSLGLMPDGQQ*VCPSLR
Trigger: ACGCAGTGATGGGCAAACCAATTGCTGCCCATCTGG...CATGAGTCCCAGGGAGTCACACTCCCCACTCCCTTCCTGGCTTGTATTTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
CDS CCA 72 bp CCCGTCGCACGGGCACCGAGAGCGTGCGGGGCGAGGTaGAGCCCAGACGCAGCGCCCCCAGGCGCACGCGGT +
Preference number: 6 (lower is better)
Translates to: PVARAPRACGAR*SPDAAPPGARG
Trigger: ACCGCGTGCGCCTGGGGGCGCTGCGTCTGGGCTCCACCTCGCCCCGCACGCTCTCGGTGCCCGTGCGACGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000571674.1
ENST00000682474.1
CDS GCA 72 bp TGGACGCGAGCGCTCAGGGGCACCGGGCGACGCAGCTaGAGCAGTGCCAGGTCGCCGCGGGCCCCGTCCTCG +
Preference number: 6 (lower is better)
Translates to: WTRALRGTGRRS*SSARSPRAPSS
Trigger: CGAGGACGGGGCCCGCGGCGACCTGGCACTGCTGCAGCTGCGTCGCCCGGTGCCCCTGAGCGCTCGCGTCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000571674.1
ENST00000682474.1
CDS GCA 72 bp CCGCACACGTGTGCCCCACGATGCTGGATGCTCGCCTaGCACGGCCACTCTCCGTCCCGGCCATCCCGGCCC +
Preference number: 6 (lower is better)
Translates to: PHTCAPRCWMLA*HGHSPSRPSRP
Trigger: GGGCCGGGATGGCCGGGACGGAGAGTGGCCGTGGCAGGCGAGCATCCAGCATCGTGGGGCACACGTGTGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000571674.1
ENST00000576886.5
ENST00000682474.1
CDS GCA 72 bp CCCGGCCATCCCGGCCCCCAACGATCCGACTGGACATaGGGGGCTGCCCGCAGGCCAGCACCAGAAGGAGCA +
Preference number: 6 (lower is better)
Translates to: PGHPGPQRSDWT*GAARRPAPEGA
Trigger: TGCTCCTTCTGGTGCTGGCCTGCGGGCAGCCCCGCATGTCCAGTCGGATCGTTGGGGGCCGGGATGGCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571674.1
CDS CCA 72 bp CTCCGTCCCGGCCATCCCGGCCCCCAACGATCCGACTaGACATGCGGGGCTGCCCGCAGGCTGCAGACTTCC +
Preference number: 6 (lower is better)
Translates to: LRPGHPGPQRSD*TCGAARRLQTS
Trigger: GGAAGTCTGCAGCCTGCGGGCAGCCCCGCATGTCCAGTCGGATCGTTGGGGGCCGGGATGGCCGGGACGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
ENST00000682474.1
CDS CCA 72 bp CTCCGTCCCGGCCATCCCGGCCCCCAACGATCCGACTaGACATGCGGGGCTGCCCGCAGGCCAGCACCAGAA +
Preference number: 6 (lower is better)
Translates to: LRPGHPGPQRSD*TCGAARRPAPE
Trigger: TTCTGGTGCTGGCCTGCGGGCAGCCCCGCATGTCCAGTCGGATCGTTGGGGGCCGGGATGGCCGGGACGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571674.1
CDS GCA 72 bp CCCGGCCATCCCGGCCCCCAACGATCCGACTGGACATaGGGGGCTGCCCGCAGGCTGCAGACTTCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: PGHPGPQRSDWT*GAARRLQTSFP
Trigger: AGGGAAGGAAGTCTGCAGCCTGCGGGCAGCCCCGCATGTCCAGTCGGATCGTTGGGGGCCGGGATGGCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000293851.9
ENST00000570702.5
ENST00000576886.5
ENST00000682474.1
CDS GCA 72 bp CTTATCCTGGTGGCCCAGGCTGTATACCCTTCGTTCTaGCCAGGGCCCAGGTATGCAGCACCCACCACCCAG +
Preference number: 6 (lower is better)
Translates to: LILVAQAVYPSF*PGPRYAAPTTQ
Trigger: CTGGGTGGTGGGTGCTGCATACCTGGGCCCTGGGCAGAACGAAGGGTATACAGCCTGGGCCACCAGGATAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS CCA 72 bp GTAAGGGTGGCACTGCCTAGGGCTTGGACTCTGGTCTaGAGCCAGCAGGGAGAAGAGAGGAGAGTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: VRVALPRAWTLV*SQQGEERRVLA
Trigger: GGCCAGGACTCTCCTCTCTTCTCCCTGCTGGCTCCAGACCAGAGTCCAAGCCCTAGGCAGTGCCACCCTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293851.9
ENST00000576886.5
CDS CCA 72 bp GTCCTCAGCTCCTGGTGGGTTCTGGACTTATCCTGGTaGCCCAGGCTGTATACCCTTCGTTCTGCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: VLSSWWVLDLSW*PRLYTLRSAQG
Trigger: GCCCTGGGCAGAACGAAGGGTATACAGCCTGGGCCACCAGGATAAGTCCAGAACCCACCAGGAGCTGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS CAA 72 bp CAGGGCCCAGGTATGCAGCACCCACCACCCAGATATTaGGGCATCCTTGGTCTCGACAGAAGCCCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: QGPGMQHPPPRY*GILGLDRSPGA
Trigger: GGCTCCAGGGCTTCTGTCGAGACCAAGGATGCCCAAATATCTGGGTGGTGGGTGCTGCATACCTGGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS CCA 72 bp AGGGCCCAGGTATGCAGCACCCACCACCCAGATATTTaGGCATCCTTGGTCTCGACAGAAGCCCTGGAGCCT +
Preference number: 6 (lower is better)
Translates to: RAQVCSTHHPDI*ASLVSTEALEP
Trigger: AGGCTCCAGGGCTTCTGTCGAGACCAAGGATGCCCAAATATCTGGGTGGTGGGTGCTGCATACCTGGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS CCA 72 bp TCTGTCCTCAGCTCCTGGTGGGTTCTGGACTTATCCTaGTGGCCCAGGCTGTATACCCTTCGTTCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: SVLSSWWVLDLS*WPRLYTLRSAQ
Trigger: CTGGGCAGAACGAAGGGTATACAGCCTGGGCCACCAGGATAAGTCCAGAACCCACCAGGAGCTGAGGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5
CDS CAA 72 bp CTTGGACTCTGGTCTGGGCTCCCTGCAGAGCACACGTaGCTGGAGCTTCTGCGCTCCATTGTTCTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: LGLWSGLPAEHT*LELLRSIVLSR
Trigger: TCTGGACAGAACAATGGAGCGCAGAAGCTCCAGCAACGTGTGCTCTGCAGGGAGCCCAGACCAGAGTCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570702.5
CDS GCA 72 bp CTGGGCTCCCTGCAGAGCACACGTTGCTGGAGCTTCTaGGCTCCATTGTTCTGTCCAGAAATCCCATCTCAG +
Preference number: 6 (lower is better)
Translates to: LGSLQSTRCWSF*APLFCPEIPSQ
Trigger: CTGAGATGGGATTTCTGGACAGAACAATGGAGCGCAGAAGCTCCAGCAACGTGTGCTCTGCAGGGAGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570702.5
CDS GCA 72 bp TTGGACTCTGGTCTGGGCTCCCTGCAGAGCACACGTTaGTGGAGCTTCTGCGCTCCATTGTTCTGTCCAGAA +
Preference number: 6 (lower is better)
Translates to: LDSGLGSLQSTR*WSFCAPLFCPE
Trigger: TTCTGGACAGAACAATGGAGCGCAGAAGCTCCAGCAACGTGTGCTCTGCAGGGAGCCCAGACCAGAGTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570702.5
CDS CCA 72 bp TGGTCCTTCTGTCTGTCCTCAGCTCCTGGTGGGTTCTaGACTTATCCTGGTGGCCCAGGCTGTATACCCTTC +
Preference number: 6 (lower is better)
Translates to: WSFCLSSAPGGF*TYPGGPGCIPF
Trigger: GAAGGGTATACAGCCTGGGCCACCAGGATAAGTCCAGAACCCACCAGGAGCTGAGGACAGACAGAAGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576886.5