RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRSS23 (Homo sapiens)

Ensembl gene IDs: ENSG00000150687

Ensembl transcript IDs: ENST00000280258.6, ENST00000527521.1, ENST00000531475.5, ENST00000531521.1, ENST00000532234.5, ENST00000532572.1, ENST00000533880.1, ENST00000533902.2

Found 539 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGTaGACCCGTCCTGAAGGAATTTGGATTTGCCTGGCCAGAGAGTCT +
Preference number: 1 (lower is better)
Translates to: HWPMRRHVSFSQETL*TRPEGIWICLARES
Trigger: AGACTCTCTGGCCAGGCAAATCCAAATTCCTTCAGGACGGGTTCACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 90 bp TACAGCCGCTCAGCCAAGGAGTTCACTGATATCTGGATGGCTGTGTaGGCCAGCCTGTGTTTCATCTCCACTGCCTTCACAGTACTGACC +
Preference number: 1 (lower is better)
Translates to: YSRSAKEFTDIWMAV*ASLCFISTAFTVLT
Trigger: GGTCAGTACTGTGAAGGCAGTGGAGATGAAACACAGGCTGGCCCACACAGCCATCCAGATATCAGTGAACTCCTTGGCTGAGCGGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR GCA 90 bp TATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATaGGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGTGAACCCGTC +
Preference number: 1 (lower is better)
Translates to: YVPMCTEKINIPIGP*GGMCLSVKRRCEPV
Trigger: GACGGGTTCACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 90 bp ACTGCAGCAAATTCCCACCACAGAACGACCACAACCACATGTGCATaGAAGGGCCAGGTGATGAAGAGGTGCCCTTACCTCACAAAACCC +
Preference number: 1 (lower is better)
Translates to: TAANSHHRTTTTTCA*KGQVMKRCPYLTKP
Trigger: GGGTTTTGTGAGGTAAGGGCACCTCTTCATCACCTGGCCCTTCCATGCACATGTGGTTGTGGTCGTTCTGTGGTGGGAATTTGCTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR GCA 90 bp CTGAACTGCAGCAAATTCCCACCACAGAACGACCACAACCACATGTaGATGGAAGGGCCAGGTGATGAAGAGGTGCCCTTACCTCACAAA +
Preference number: 1 (lower is better)
Translates to: LNCSKFPPQNDHNHM*MEGPGDEEVPLPHK
Trigger: TTTGTGAGGTAAGGGCACCTCTTCATCACCTGGCCCTTCCATGCACATGTGGTTGTGGTCGTTCTGTGGTGGGAATTTGCTGCAGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR GCA 90 bp CCCGTCCTGAAGGAATTTGGATTTGCCTGGCCAGAGAGTCTGAACTaGAGCAAATTCCCACCACAGAACGACCACAACCACATGTGCATG +
Preference number: 1 (lower is better)
Translates to: PVLKEFGFAWPESLN*SKFPPQNDHNHMCM
Trigger: CATGCACATGTGGTTGTGGTCGTTCTGTGGTGGGAATTTGCTGCAGTTCAGACTCTCTGGCCAGGCAAATCCAAATTCCTTCAGGACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 90 bp GTCAAGAGACGCTGTGAACCCGTCCTGAAGGAATTTGGATTTGCCTaGCCAGAGAGTCTGAACTGCAGCAAATTCCCACCACAGAACGAC +
Preference number: 1 (lower is better)
Translates to: VKRRCEPVLKEFGFA*PESLNCSKFPPQND
Trigger: GTCGTTCTGTGGTGGGAATTTGCTGCAGTTCAGACTCTCTGGCCAGGCAAATCCAAATTCCTTCAGGACGGGTTCACAGCGTCTCTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 90 bp TCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTCTTTACTTATTTaGTCATTGGAACTTTGTTCATTGCTGCAGGTTTGGTGGCCTTGT +
Preference number: 1 (lower is better)
Translates to: SMPSPGSWWLPSLLI*SLELCSLLQVWWPC
Trigger: ACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 90 bp GGGGAAGAGTGTCACTCTGTGGGAACCAATTCTGATCAGTACATCTaGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATGAT +
Preference number: 1 (lower is better)
Translates to: GEECHSVGTNSDQYI*VKRSLNCVLKCGYD
Trigger: ATCATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCAGATGTACTGATCAGAATTGGTTCCCACAGAGTGACACTCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR GCA 90 bp ATCTTGATTATGAGACTGGTGGATGCAGATGAACTGACTGGCTTGTaGTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTG +
Preference number: 1 (lower is better)
Translates to: ILIMRLVDADELTGL*YVGNQNLDALTGFV
Trigger: CACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAGCACAAGCCAGTCAGTTCATCTGCATCCACCAGTCTCATAATCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 90 bp CCTCACCGGGTTCGTGGTGGCTCCCCTCTTTACTTATTTGGTCATTaGAACTTTGTTCATTGCTGCAGGTTTGGTGGCCTTGTTCAAAAT +
Preference number: 1 (lower is better)
Translates to: PHRVRGGSPLYLFGH*NFVHCCRFGGLVQN
Trigger: ATTTTGAACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 90 bp TGTGCTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTaGTGGCTCCCCTCTTTACTTATTTGGTCATTGGAACTTTGTTCA +
Preference number: 1 (lower is better)
Translates to: CAMLETKISMPSPGS*WLPSLLIWSLELCS
Trigger: TGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 90 bp ATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGTaGTTATTCTGTTGTGACATCTGCCAGGCAATGCTTCCATTGTTC +
Preference number: 1 (lower is better)
Translates to: IIFDQAGGLCQAPNK*LFCCDICQAMLPLF
Trigger: GAACAATGGAAGCATTGCCTGGCAGATGTCACAACAGAATAACCACTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR TCA 90 bp TTTACAACAGGTCTTCCCAGAGCTTTTAATGTGCAGACAGGCATGTaGACCTCTGATAAAGAGAGGGAAAATGGAGAGGCATCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: FTTGLPRAFNVQTGM*TSDKERENGEASSS
Trigger: AGAGGAAGATGCCTCTCCATTTTCCCTCTCTTTATCAGAGGTTCACATGCCTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR GCA 90 bp GGTGGCTCCCCTCTTTACTTATTTGGTCATTGGAACTTTGTTCATTaGTGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCA +
Preference number: 1 (lower is better)
Translates to: GGSPLYLFGHWNFVH*CRFGGLVQNSVKSS
Trigger: TGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 90 bp AATCCTGTTAAATGGAAGGGTTGGGATAAACACTCTTGGCCACTCTaGTATGACTTTAAAGTTGGGAGGGCCATATGCAAAGACTTCCTA +
Preference number: 1 (lower is better)
Translates to: NPVKWKGWDKHSWPL*YDFKVGRAICKDFL
Trigger: TAGGAAGTCTTTGCATATGGCCCTCCCAACTTTAAAGTCATACCAGAGTGGCCAAGAGTGTTTATCCCAACCCTTCCATTTAACAGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR TCA 90 bp AGTGAAAACCATTGTCATCTTGATTATGAGACTGGTGGATGCAGATaGACTGACTGGCTTGTGCTATGTTGGAAACCAAAATCTCGATGC +
Preference number: 1 (lower is better)
Translates to: SENHCHLDYETGGCR*TDWLVLCWKPKSRC
Trigger: GCATCGAGATTTTGGTTTCCAACATAGCACAAGCCAGTCAGTTCATCTGCATCCACCAGTCTCATAATCAAGATGACAATGGTTTTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 90 bp CCTGCAACGTGTGTGATTGCCTGTTATTTTTATGAAATCTCCAACTaGGCACTTTTTCGGTATTCTGCAGATGATTCCAACATGGCTGTT +
Preference number: 1 (lower is better)
Translates to: PATCVIACYFYEISN*ALFRYSADDSNMAV
Trigger: AACAGCCATGTTGGAATCATCTGCAGAATACCGAAAAAGTGCCCAGTTGGAGATTTCATAAAAATAACAGGCAATCACACACGTTGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR GCA 90 bp GGCTCCCCTCTTTACTTATTTGGTCATTGGAACTTTGTTCATTGCTaGAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAA +
Preference number: 1 (lower is better)
Translates to: GSPLYLFGHWNFVHC*RFGGLVQNSVKSSK
Trigger: TTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 90 bp TTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTGGTaGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACAA +
Preference number: 1 (lower is better)
Translates to: LLIWSLELCSLLQVW*PCSKFGQIFKRMGQ
Trigger: TTGTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 90 bp TCTTTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTaGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGA +
Preference number: 1 (lower is better)
Translates to: SLLIWSLELCSLLQV*WPCSKFGQIFKRMG
Trigger: TCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR TCA 90 bp TATTTCTCATATGATTTGAAGAAAGCACTGTGGTTGTACGTTTCTTaGGTGCCTTATCAGAATTATCCTTCCAAAAAGCTCAAGAAAGAC +
Preference number: 1 (lower is better)
Translates to: YFSYDLKKALWLYVS*VPYQNYPSKKLKKD
Trigger: GTCTTTCTTGAGCTTTTTGGAAGGATAATTCTGATAAGGCACTCAAGAAACGTACAACCACAGTGCTTTCTTCAAATCATATGAGAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR CCA 90 bp ATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCAGATCAACATCCCCATTaGCCCATGCGGCGGCATGTG +
Preference number: 2 (lower is better)
Translates to: MCQCAQRRSTSPLAHAAADQHPH*PMRRHV
Trigger: CACATGCCGCCGCATGGGCCAATGGGGATGTTGATC...TGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR TCA 90 bp ACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGTGAGCCAAGGAGTTCACTaGTATCTGGATGGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: TSPLAHAAACVFQSRDAVSQGVH*YLDGCV
Trigger: CACACAGCCATCCAGATATCAGTGAACTCCTTGGCT...CACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp TTCCCACCACAGAACGACCACAACCACATGTGCATGGAAGGGCCAGGTGATGAATTCCACATTGCAGCCTaGGCCATCCCCGCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: FPPQNDHNHMCMEGPGDEFHIAA*AIPAVK
Trigger: TTTCACTGCGGGGATGGCCCAGGCTGCAATGTGGAA...TTCATCACCTGGCCCTTCCATGCACATGTGGTTGTGGTCGTTCTGTGGTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR TCA 90 bp ACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGTGTGGATGCAGATGAACTaGCTGGCTTGTGCTATGTTG +
Preference number: 2 (lower is better)
Translates to: TSPLAHAAACVFQSRDAVWMQMN*LACAML
Trigger: CAACATAGCACAAGCCAGTCAGTTCATCTGCATCCA...CACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp ATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTATCTGGATGGCTGTGTaGGCCAGCCTGTGTTTCATC +
Preference number: 2 (lower is better)
Translates to: MCTEKINIPIGPCGGMCLIWMAV*ASLCFI
Trigger: GATGAAACACAGGCTGGCCCACACAGCCATCCAGAT...AAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp GCTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCGCAGCATGGTGTTTCTaGCGATGTTCTCTTCTCTTG +
Preference number: 2 (lower is better)
Translates to: AMLETKISMPSPGSWWLPAAWCF*RCSLLL
Trigger: CAAGAGAAGAGAACATCGCCAGAAACACCATGCTGC...GGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532234.5
3UTR CAA 90 bp CTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTCTTTACTTATTaGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTGGTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: LDALTGFVVAPLFTY*VIGTLFIAAGLVAL
Trigger: CAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR TCA 90 bp ACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGTGTGTGGGAACCAATTCTaGTCAGTACATCTGGGTGAA +
Preference number: 2 (lower is better)
Translates to: TSPLAHAAACVFQSRDAVCGNQF*SVHLGE
Trigger: TTCACCCAGATGTACTGATCAGAATTGGTTCCCACA...CACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CAA 90 bp GTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATaGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGTG +
Preference number: 2 (lower is better)
Translates to: VLFMCQCAQRRSTSP*AHAAACVFQSRDAV
Trigger: CACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR TCA 90 bp GGCTATGATGCTGGCTTATACAGCCGCTCAGCCAAGGAGTTCACTGATATCTGGACTGGTGGATGCAGATaGACTGACTGGCTTGTGCTA +
Preference number: 2 (lower is better)
Translates to: GYDAGLYSRSAKEFTDIWTGGCR*TDWLVL
Trigger: TAGCACAAGCCAGTCAGTTCATCTGCATCCACCAGT...CCAGATATCAGTGAACTCCTTGGCTGAGCGGCTGTATAAGCCAGCATCATAGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR GCA 90 bp ATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTACTGTACACAGTTCCTaGAACGTGTGTGATTGCCTG +
Preference number: 2 (lower is better)
Translates to: MCTEKINIPIGPCGGMCLTVHSS*NVCDCL
Trigger: CAGGCAATCACACACGTTGCAGGAACTGTGTACAGT...AAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp CTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTATTCTGACACTCACTTaGTTTTTGGCAGCAGGACTC +
Preference number: 2 (lower is better)
Translates to: LCWKPKSRCPHRVRGGSPILTLT*FLAAGL
Trigger: GAGTCCTGCTGCCAAAAACCAAGTGAGTGTCAGAAT...AGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp ATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCAATTCTGACACTCACTTaGTTTTTGGCAGCAGGACTC +
Preference number: 2 (lower is better)
Translates to: MCQCAQRRSTSPLAHAAAILTLT*FLAAGL
Trigger: GAGTCCTGCTGCCAAAAACCAAGTGAGTGTCAGAAT...TGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp TGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATGATGCTGGCTTAGAGTTCACTGATATCTaGATGGCTGTGTGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: WVKRSLNCVLKCGYDAGLEFTDI*MAVWAS
Trigger: GCTGGCCCACACAGCCATCCAGATATCAGTGAACTC...TAAGCCAGCATCATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp GGCTATGATGCTGGCTTATACAGCCGCTCAGCCAAGGAGTTCACTGATATCTGGCGTCCTGAAGGAATTTaGATTTGCCTGGCCAGAGAG +
Preference number: 2 (lower is better)
Translates to: GYDAGLYSRSAKEFTDIWRPEGI*ICLARE
Trigger: CTCTCTGGCCAGGCAAATCCAAATTCCTTCAGGACG...CCAGATATCAGTGAACTCCTTGGCTGAGCGGCTGTATAAGCCAGCATCATAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR TCA 90 bp CTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGACTGGTGGATGCAGATaGACTGACTGGCTTGTGCTA +
Preference number: 2 (lower is better)
Translates to: LFMCQCAQRRSTSPLAHATGGCR*TDWLVL
Trigger: TAGCACAAGCCAGTCAGTTCATCTGCATCCACCAGT...CGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR GCA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTCAGGCTGGAGGACTGTaGCAGGCTCCAAACAAGTGG +
Preference number: 2 (lower is better)
Translates to: SSRKTSRKSPRECLSDSAQAGGL*QAPNKW
Trigger: CCACTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTG...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR GCA 90 bp GGCTATGATGCTGGCTTATACAGCCGCTCAGCCAAGGAGTTCACTGATATCTGGACTGTACACAGTTCCTaGAACGTGTGTGATTGCCTG +
Preference number: 2 (lower is better)
Translates to: GYDAGLYSRSAKEFTDIWTVHSS*NVCDCL
Trigger: CAGGCAATCACACACGTTGCAGGAACTGTGTACAGT...CCAGATATCAGTGAACTCCTTGGCTGAGCGGCTGTATAAGCCAGCATCATAGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR GCA 90 bp ATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTGGAACTTTGTTCATTaGTGCAGGTTTGGTGGCCTT +
Preference number: 2 (lower is better)
Translates to: MCTEKINIPIGPCGGMCLWNFVH*CRFGGL
Trigger: AAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCA...AAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp AGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACTTGCTGCAGGTTTGGTaGCCTTGTTCAAAATTCGGT +
Preference number: 2 (lower is better)
Translates to: RSTSPLAHAAACVFQSRDLLQVW*PCSKFG
Trigger: ACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAA...GTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp ATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATCATTGCTGCAGGTTTaGTGGCCTTGTTCAAAATTC +
Preference number: 2 (lower is better)
Translates to: MCQCAQRRSTSPLAHAAASLLQV*WPCSKF
Trigger: GAATTTTGAACAAGGCCACCAAACCTGCAGCAATGA...TGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp ATGTGTCTTTCAGTCAAGAGACGCTGTGAACCCGTCCTGAAGGAATTTGGATTTCCCTCACCGGGTTCGTaGTGGCTCCCCTCTTTACTT +
Preference number: 2 (lower is better)
Translates to: MCLSVKRRCEPVLKEFGFPSPGS*WLPSLL
Trigger: AAGTAAAGAGGGGAGCCACCACGAACCCGGTGAGGG...AAATCCAAATTCCTTCAGGACGGGTTCACAGCGTCTCTTGACTGAAAGACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp AGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCTTCCACATTGCAGCCTaGGCCATCCCCGCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: RLPGSIQLSFVGAFGQTSFHIAA*AIPAVK
Trigger: TTTCACTGCGGGGATGGCCCAGGCTGCAATGTGGAA...GGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCAGGCAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CAA 90 bp CCCTCACCGGGTTCGTGGTGGCTCCCCTCTTTACTTATTTGGTCATaGGAACTTTGTTCATTGCTGCAGGTTTGGTGGCCTTGTTCAAAA +
Preference number: 2 (lower is better)
Translates to: PSPGSWWLPSLLIWS*ELCSLLQVWWPCSK
Trigger: TTTTGAACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR TCA 90 bp AGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACGATGTTCTCTTCTCTTaGTTGATGATTCCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: RSTSPLAHAAACVFQSRDDVLFS*LMIPQS
Trigger: GCTCTGAGGAATCATCAATCAAGAGAAGAGAACATC...GTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532234.5
3UTR-3UTR GCA 90 bp CCTCAACTTGTCCCTTTACAACAGGTCTTCCCAGAGCTTTTAATGTGCAGACAGCAGGTTTACCTGGGGTaGAAGCACAGCAAACACGTG +
Preference number: 2 (lower is better)
Translates to: PQLVPLQQVFPELLMCRQQVYLG*KHSKHV
Trigger: CACGTGTTTGCTGTGCTTGCACCCCAGGTAAACCTG...CTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAAGGGACAAGTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR GCA 90 bp GATCAGTACATCTGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATCAGGTGATGAAGAGGTaGCCTTACCTCACAAAACCC +
Preference number: 2 (lower is better)
Translates to: DQYIWVKRSLNCVLKCGYQVMKR*PYLTKP
Trigger: GGGTTTTGTGAGGTAAGGGCACCTCTTCATCACCTG...ATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCAGATGTACTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp AAGAGACGCTGTGAACCCGTCCTGAAGGAATTTGGATTTGCCTGGCCAGAGAGTTCTGATCAGTACATCTaGGTGAAAAGGAGCCTGAAC +
Preference number: 2 (lower is better)
Translates to: KRRCEPVLKEFGFAWPESSDQYI*VKRSLN
Trigger: GTTCAGGCTCCTTTTCACCCAGATGTACTGATCAGA...ACTCTCTGGCCAGGCAAATCCAAATTCCTTCAGGACGGGTTCACAGCGTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp AGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACTTATGTCTTTGTTGGTaGGCATCACTTCAGGCATGT +
Preference number: 2 (lower is better)
Translates to: RSTSPLAHAAACVFQSRDLCLCW*ASLQAC
Trigger: ACATGCCTGAAGTGATGCCCACCAACAAAGACATAA...GTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532234.5
3UTR CAA 90 bp GTCATCTTGATTATGAGACTGGTGGATGCAGATGAACTGACTGGCTaGTGCTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTC +
Preference number: 2 (lower is better)
Translates to: VILIMRLVDADELTG*CYVGNQNLDALTGF
Trigger: GAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAGCACAAGCCAGTCAGTTCATCTGCATCCACCAGTCTCATAATCAAGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR TCA 90 bp TTCCCACCACAGAACGACCACAACCACATGTGCATGGAAGGGCCAGGTGATGAATTCCTGCAACGTGTGTaGTTGCCTGTTATTTTTATG +
Preference number: 2 (lower is better)
Translates to: FPPQNDHNHMCMEGPGDEFLQRV*LPVIFM
Trigger: CATAAAAATAACAGGCAATCACACACGTTGCAGGAA...TTCATCACCTGGCCCTTCCATGCACATGTGGTTGTGGTCGTTCTGTGGTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR GCA 90 bp CCTCAACTTGTCCCTTTACAACAGGTCTTCCCAGAGCTTTTAATGTGCAGACAGGTGGCCACAACTGTTTaGTGGGAGGAAATACAGCCT +
Preference number: 2 (lower is better)
Translates to: PQLVPLQQVFPELLMCRQVATTV*WEEIQP
Trigger: AGGCTGTATTTCCTCCCAGCAAACAGTTGTGGCCAC...CTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAAGGGACAAGTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR GCA 90 bp TTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCAAACCAAAATCTCGATaGCCTCACCGGGTTCGTGGT +
Preference number: 2 (lower is better)
Translates to: LFCLCANVHREDQHPHWPKPKSR*PHRVRG
Trigger: ACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTT...GGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp CAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGTGGTTATTCTGTTGTGACATCGTTAAATGGAAGGGTTaGGATAAACACTCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: QAGGLCQAPNKWLFCCDIVKWKG*DKHSWP
Trigger: TGGCCAAGAGTGTTTATCCCAACCCTTCCATTTAAC...GATGTCACAACAGAATAACCACTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR CCA 90 bp TCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGTGAACTACTTATTTGGTCATTaGAACTTTGTTCATTGCTGC +
Preference number: 2 (lower is better)
Translates to: SPLAHAAACVFQSRDAVNYLFGH*NFVHCC
Trigger: GCAGCAATGAACAAAGTTCCAATGACCAAATAAGTA...GTTCACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp CCTTTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGGAGTTCACTGATATCTaGATGGCTGTGTGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: PLFCLCANVHREDQHPHWEFTDI*MAVWAS
Trigger: GCTGGCCCACACAGCCATCCAGATATCAGTGAACTC...CCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp TGGCTTGTGCTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTATCACTTCAGGCATGTaGATTTGGTCTGCCAAAACT +
Preference number: 2 (lower is better)
Translates to: WLVLCWKPKSRCPHRVRGITSGM*IWSAKT
Trigger: AGTTTTGGCAGACCAAATCCACATGCCTGAAGTGAT...ACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAGCACAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532234.5
3UTR-3UTR TCA 90 bp CCTTTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGAGTCAAGAGACGCTGTaGACCCGTCCTGAAGGAATT +
Preference number: 2 (lower is better)
Translates to: PLFCLCANVHREDQHPHWSQETL*TRPEGI
Trigger: AATTCCTTCAGGACGGGTTCACAGCGTCTCTTGACT...CCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR GCA 90 bp CTATGCAGAATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGATGAAGACCCTTAATTaGTGCCAGGAGGGAACACTG +
Preference number: 2 (lower is better)
Translates to: LCRIIFDQAGGLCQAPNKMKTLN*CQEGTL
Trigger: CAGTGTTCCCTCCTGGCAGCAATTAAGGGTCTTCAT...CTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTATTCTGCATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR GCA 90 bp CCTCAACTTGTCCCTTTACAACAGGTCTTCCCAGAGCTTTTAATGTGCAGACAGTTTTCCTGGCGGCTCTaGATCTCCTTGCTATGCATA +
Preference number: 2 (lower is better)
Translates to: PQLVPLQQVFPELLMCRQFSWRL*ISLLCI
Trigger: TATGCATAGCAAGGAGATGCAGAGCCGCCAGGAAAA...CTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAAGGGACAAGTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR GCA 90 bp TGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACAAACCAAAATCTCGATaGCCTCACCGGGTTCGTGGT +
Preference number: 2 (lower is better)
Translates to: CRFGGLVQNSVKSSKGWDKPKSR*PHRVRG
Trigger: ACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTT...GTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR GCA 90 bp GGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTGCAGGTGATGAAGAGGTaGCCTTACCTCACAAAACCC +
Preference number: 2 (lower is better)
Translates to: GSIQLSFVGAFGQTSKSLQVMKR*PYLTKP
Trigger: GGGTTTTGTGAGGTAAGGGCACCTCTTCATCACCTG...CAATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp GGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTGTCACCGGGTTCGTGGTaGCTCCCCTCTTTACTTATT +
Preference number: 2 (lower is better)
Translates to: GSIQLSFVGAFGQTSKSLSPGSW*LPSLLI
Trigger: AATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGA...CAATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp AGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCGCAGCAGGACTCAAATaGGGTCATGAAGCCATTGAA +
Preference number: 2 (lower is better)
Translates to: RLPGSIQLSFVGAFGQTSAAGLK*GHEAIE
Trigger: TTCAATGGCTTCATGACCCCATTTGAGTCCTGCTGC...GGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCAGGCAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp GAAGGAATTTGGATTTGCCTGGCCAGAGAGTCTGAACTGCAGCAAATTCCCACCAAGAGTGTCACTCTGTaGGAACCAATTCTGATCAGT +
Preference number: 2 (lower is better)
Translates to: EGIWICLARESELQQIPTKSVTL*EPILIS
Trigger: ACTGATCAGAATTGGTTCCCACAGAGTGACACTCTT...GGTGGGAATTTGCTGCAGTTCAGACTCTCTGGCCAGGCAAATCCAAATTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp TGTCACTCTGTGGGAACCAATTCTGATCAGTACATCTGGGTGAAAAGGAGCCTGTCAGGCATGTGGATTTaGTCTGCCAAAACTCTTCAC +
Preference number: 2 (lower is better)
Translates to: CHSVGTNSDQYIWVKRSLSGMWI*SAKTLH
Trigger: GTGAAGAGTTTTGGCAGACCAAATCCACATGCCTGA...CAGGCTCCTTTTCACCCAGATGTACTGATCAGAATTGGTTCCCACAGAGTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532234.5
3UTR-3UTR GCA 90 bp CTATGCAGAATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGTTCTGTTGTGACATCTaGCAGGCAATGCTTCCATTG +
Preference number: 2 (lower is better)
Translates to: LCRIIFDQAGGLCQAPNKFCCDI*QAMLPL
Trigger: CAATGGAAGCATTGCCTGGCAGATGTCACAACAGAA...CTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTATTCTGCATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR GCA 90 bp TGTCACTCTGTGGGAACCAATTCTGATCAGTACATCTGGGTGAAAAGGAGCCTGAACTTTGTTCATTGCTaGAGGTTTGGTGGCCTTGTT +
Preference number: 2 (lower is better)
Translates to: CHSVGTNSDQYIWVKRSLNFVHC*RFGGLV
Trigger: AACAAGGCCACCAAACCTGCAGCAATGAACAAAGTT...CAGGCTCCTTTTCACCCAGATGTACTGATCAGAATTGGTTCCCACAGAGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR GCA 90 bp AAGAGACGCTGTGAACCCGTCCTGAAGGAATTTGGATTTGCCTGGCCAGAGAGTATGAAGCCATTGAAATaGACAGCTCTTATTTCCACA +
Preference number: 2 (lower is better)
Translates to: KRRCEPVLKEFGFAWPESMKPLK*TALIST
Trigger: TGTGGAAATAAGAGCTGTGCATTTCAATGGCTTCAT...ACTCTCTGGCCAGGCAAATCCAAATTCCTTCAGGACGGGTTCACAGCGTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR GCA 90 bp TTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCGTGTTTCATCTCCACTaGCTTCACAGTACTGACCTT +
Preference number: 2 (lower is better)
Translates to: LFCLCANVHREDQHPHWPVFHLH*LHSTDL
Trigger: AAGGTCAGTACTGTGAAGGCAGTGGAGATGAAACAC...GGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp TTCCCACCACAGAACGACCACAACCACATGTGCATGGAAGGGCCAGGTGATGAAAAATCTTCAAAAGGATaGGACAAAGACAGACAAGTT +
Preference number: 2 (lower is better)
Translates to: FPPQNDHNHMCMEGPGDEKSSKG*DKDRQV
Trigger: AACTTGTCTGTCTTTGTCCCATCCTTTTGAAGATTT...TTCATCACCTGGCCCTTCCATGCACATGTGGTTGTGGTCGTTCTGTGGTGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp TTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCTCTGATCAGTACATCTaGGTGAAAAGGAGCCTGAAC +
Preference number: 2 (lower is better)
Translates to: LFCLCANVHREDQHPHWPSDQYI*VKRSLN
Trigger: GTTCAGGCTCCTTTTCACCCAGATGTACTGATCAGA...GGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CAA 90 bp AGGGTTGGGATAAACACTCTTGGCCACTCTGGTATGACTTTAAAGTaGGGAGGGCCATATGCAAAGACTTCCTACAAAGTAGAGCAACAA +
Preference number: 2 (lower is better)
Translates to: RVGINTLGHSGMTLK*GGPYAKTSYKVEQQ
Trigger: TTGTTGCTCTACTTTGTAGGAAGTCTTTGCATATGGCCCTCCCAACTTTAAAGTCATACCAGAGTGGCCAAGAGTGTTTATCCCAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR CAA 90 bp AGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATaGCTACAATGCAGGTTTACCTGGGGTGCAAGCACAGCAAACACG +
Preference number: 2 (lower is better)
Translates to: RECLSDSAPSEYPYK*LQCRFTWGASTANT
Trigger: CGTGTTTGCTGTGCTTGCACCCCAGGTAAACCTGCATTGTAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR CCA 90 bp CTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGTATGAAATCTCCAACTaGGCACTTTTTCGGTATTCT +
Preference number: 2 (lower is better)
Translates to: LFMCQCAQRRSTSPLAHAYEISN*ALFRYS
Trigger: AGAATACCGAAAAAGTGCCCAGTTGGAGATTTCATA...CGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp AGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAAACTCTTCACACGTaGCAGAAGTGTTCCAACAGA +
Preference number: 2 (lower is better)
Translates to: RLPGSIQLSFVGAFGQTSKTLHT*QKCSNR
Trigger: TCTGTTGGAACACTTCTGCCACGTGTGAAGAGTTTT...GGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCAGGCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532234.5
3UTR CAA 90 bp TGGTGGCTCCCCTCTTTACTTATTTGGTCATTGGAACTTTGTTCATaGCTGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTC +
Preference number: 2 (lower is better)
Translates to: WWLPSLLIWSLELCS*LQVWWPCSKFGQIF
Trigger: GAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp AGAAAGCACTGTGGTTGTACGTTTCTTGAGTGCCTTATCAGAATTATCCTTCCAGCCACAACTGTTTGCTaGGAGGAAATACAGCCTGTT +
Preference number: 2 (lower is better)
Translates to: RKHCGCTFLECLIRIILPATTVC*EEIQPV
Trigger: AACAGGCTGTATTTCCTCCCAGCAAACAGTTGTGGC...TGGAAGGATAATTCTGATAAGGCACTCAAGAAACGTACAACCACAGTGCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR CCA 90 bp GGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTGACTGATGGTCAAGATTaGGGTGTTCTCAGTACTGTA +
Preference number: 2 (lower is better)
Translates to: GSIQLSFVGAFGQTSKSLTDGQD*GVLSTV
Trigger: TACAGTACTGAGAACACCCCAATCTTGACCATCAGT...CAATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp CCTTTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGACTGATGGTCAAGATTaGGGTGTTCTCAGTACTGTA +
Preference number: 2 (lower is better)
Translates to: PLFCLCANVHREDQHPHWTDGQD*GVLSTV
Trigger: TACAGTACTGAGAACACCCCAATCTTGACCATCAGT...CCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp TTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTGGTGGCCTTGTGCAGCAGGACTCAAATaGGGTCATGAAGCCATTGAA +
Preference number: 2 (lower is better)
Translates to: LLIWSLELCSLLQVWWPCAAGLK*GHEAIE
Trigger: TTCAATGGCTTCATGACCCCATTTGAGTCCTGCTGC...ACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR TCA 90 bp GAGCACACTTTGGGAAATGTGGTTCTACTAGCCTTACTAGGCAAATATGCTTCTAACCCACCACCAAGATaGATCTCAGAAGAAAACACA +
Preference number: 2 (lower is better)
Translates to: EHTLGNVVLLALLGKYASNPPPR*ISEENT
Trigger: TGTGTTTTCTTCTGAGATTCATCTTGGTGGTGGGTT...AGAAGCATATTTGCCTAGTAAGGCTAGTAGAACCACATTTCCCAAAGTGTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR TCA 90 bp TTGATTATGAGACTGGTGGATGCAGATGAACTGACTGGCTTGTGCTATGTTGGATGCCTGTTATTTTTATaGAATCTCCAACTGGGCACT +
Preference number: 2 (lower is better)
Translates to: LIMRLVDADELTGLCYVGCLLFL*NLQLGT
Trigger: AGTGCCCAGTTGGAGATTTCATAAAAATAACAGGCA...TCCAACATAGCACAAGCCAGTCAGTTCATCTGCATCCACCAGTCTCATAATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR GCA 90 bp AGAAAGCACTGTGGTTGTACGTTTCTTGAGTGCCTTATCAGAATTATCCTTCCAGTTGGGAGGGCCATATaGAAAGACTTCCTACAAAGT +
Preference number: 2 (lower is better)
Translates to: RKHCGCTFLECLIRIILPVGRAI*KDFLQS
Trigger: ACTTTGTAGGAAGTCTTTGCATATGGCCCTCCCAAC...TGGAAGGATAATTCTGATAAGGCACTCAAGAAACGTACAACCACAGTGCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR GCA 90 bp GAGCACACTTTGGGAAATGTGGTTCTACTAGCCTTACTAGGCAAATATGCTTCTTACAAATTGCTACAATaGAGGTTTACCTGGGGTGCA +
Preference number: 2 (lower is better)
Translates to: EHTLGNVVLLALLGKYASYKLLQ*RFTWGA
Trigger: TGCACCCCAGGTAAACCTGCATTGTAGCAATTTGTA...AGAAGCATATTTGCCTAGTAAGGCTAGTAGAACCACATTTCCCAAAGTGTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR GCA 90 bp CCTTTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGATAGAATTTTTGTACTaGAGCATGGTGTTTCTGGCG +
Preference number: 2 (lower is better)
Translates to: PLFCLCANVHREDQHPHWIEFLY*SMVFLA
Trigger: CGCCAGAAACACCATGCTGCAGTACAAAAATTCTAT...CCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532234.5
3UTR-3UTR GCA 90 bp TGGTTTAAAAGTAGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGCATGTGGATTTGGTCTaGCAAAACTCTTCACACGTG +
Preference number: 2 (lower is better)
Translates to: WFKSRYLDCLEAFNSALWHVDLV*QNSSHV
Trigger: CACGTGTGAAGAGTTTTGGCAGACCAAATCCACATG...CCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACTTTTAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532234.5
3UTR-3UTR CCA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTACACTCTTGGCCACTCTaGTATGACTTTAAAGTTGGG +
Preference number: 2 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLHSWPL*YDFKVG
Trigger: CCCAACTTTAAAGTCATACCAGAGTGGCCAAGAGTG...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR CCA 90 bp GAGCACACTTTGGGAAATGTGGTTCTACTAGCCTTACTAGGCAAATATGCTTCTCAGGCTCCAAACAAGTaGTTATTCTGTTGTGACATC +
Preference number: 2 (lower is better)
Translates to: EHTLGNVVLLALLGKYASQAPNK*LFCCDI
Trigger: GATGTCACAACAGAATAACCACTTGTTTGGAGCCTG...AGAAGCATATTTGCCTAGTAAGGCTAGTAGAACCACATTTCCCAAAGTGTGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR CCA 90 bp CCTCAACTTGTCCCTTTACAACAGGTCTTCCCAGAGCTTTTAATGTGCAGACAGCAAAGAAAATTGTGCTaGAACTCAGAATTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: PQLVPLQQVFPELLMCRQQRKLC*NSEFSW
Trigger: CCAGGAAAATTCTGAGTTCCAGCACAATTTTCTTTG...CTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAAGGGACAAGTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR CCA 90 bp TTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTGGTGGCCTTGTTTGCTGCAGGTTTGGTaGCCTTGTTCAAAATTCGGT +
Preference number: 2 (lower is better)
Translates to: LLIWSLELCSLLQVWWPCLLQVW*PCSKFG
Trigger: ACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAA...ACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR GCA 90 bp CTTTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTGGTGGCCTTAACTTTGTTCATTGCTaGAGGTTTGGTGGCCTTGTT +
Preference number: 2 (lower is better)
Translates to: LYLFGHWNFVHCCRFGGLNFVHC*RFGGLV
Trigger: AACAAGGCCACCAAACCTGCAGCAATGAACAAAGTT...AAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR GCA 90 bp TGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACATGAAGCCATTGAAATaGACAGCTCTTATTTCCACA +
Preference number: 2 (lower is better)
Translates to: CRFGGLVQNSVKSSKGWDMKPLK*TALIST
Trigger: TGTGGAAATAAGAGCTGTGCATTTCAATGGCTTCAT...GTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR GCA 90 bp CAAGTGTTGTGCAAAGAGGGCTTATGCAATTCTTCAGACCCTATTTATTTTATTCCAGAGAGTCTGAACTaGAGCAAATTCCCACCACAG +
Preference number: 2 (lower is better)
Translates to: QVLCKEGLCNSSDPIYFIPESLN*SKFPPQ
Trigger: CTGTGGTGGGAATTTGCTGCAGTTCAGACTCTCTGG...AATAAAATAAATAGGGTCTGAAGAATTGCATAAGCCCTCTTTGCACAACACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp TGGTTTAAAAGTAGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGAAGAGTGTCACTCTGTaGGAACCAATTCTGATCAGT +
Preference number: 2 (lower is better)
Translates to: WFKSRYLDCLEAFNSALWKSVTL*EPILIS
Trigger: ACTGATCAGAATTGGTTCCCACAGAGTGACACTCTT...CCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACTTTTAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp CAAGTGTTGTGCAAAGAGGGCTTATGCAATTCTTCAGACCCTATTTATTTTATTACAACCACATGTGCATaGAAGGGCCAGGTGATGAAG +
Preference number: 2 (lower is better)
Translates to: QVLCKEGLCNSSDPIYFITTTCA*KGQVMK
Trigger: CTTCATCACCTGGCCCTTCCATGCACATGTGGTTGT...AATAAAATAAATAGGGTCTGAAGAATTGCATAAGCCCTCTTTGCACAACACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp TGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTTTCAACTCAGCTTTGTaGGAGCATTTGGTCAAACTT +
Preference number: 2 (lower is better)
Translates to: WKHSTQLCGSIWSNFQVIFNSAL*EHLVKL
Trigger: AAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAA...AATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp TGGTTTAAAAGTAGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGTTTTGTACTGCAGCATaGTGTTTCTGGCGATGTTCT +
Preference number: 2 (lower is better)
Translates to: WFKSRYLDCLEAFNSALWFCTAA*CFWRCS
Trigger: AGAACATCGCCAGAAACACCATGCTGCAGTACAAAA...CCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACTTTTAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532234.5
3UTR CAA 90 bp CTCTTTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTaGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGG +
Preference number: 2 (lower is better)
Translates to: LFTYLVIGTLFIAAG*VALFKIRSNLQKDG
Trigger: CCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR TCA 90 bp GAGCACACTTTGGGAAATGTGGTTCTACTAGCCTTACTAGGCAAATATGCTTCTTGGTTGTACGTTTCTTaGGTGCCTTATCAGAATTAT +
Preference number: 2 (lower is better)
Translates to: EHTLGNVVLLALLGKYASWLYVS*VPYQNY
Trigger: ATAATTCTGATAAGGCACTCAAGAAACGTACAACCA...AGAAGCATATTTGCCTAGTAAGGCTAGTAGAACCACATTTCCCAAAGTGTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR TCA 90 bp GTTCATTGCTGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAATGCCTGTTATTTTTATaGAATCTCCAACTGGGCACT +
Preference number: 2 (lower is better)
Translates to: VHCCRFGGLVQNSVKSSKCLLFL*NLQLGT
Trigger: AGTGCCCAGTTGGAGATTTCATAAAAATAACAGGCA...TTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR TCA 90 bp TGGTTTAAAAGTAGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGTTCCAACAGATTGGTaGATTACACATAAGGTATCC +
Preference number: 2 (lower is better)
Translates to: WFKSRYLDCLEAFNSALWVPTDW*ITHKVS
Trigger: GGATACCTTATGTGTAATTCACCAATCTGTTGGAAC...CCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACTTTTAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532234.5
3UTR-3UTR GCA 90 bp AGAAAGCACTGTGGTTGTACGTTTCTTGAGTGCCTTATCAGAATTATCCTTCCAGTTCAAAGACTACCATaGAAATGCCTCCAAATCCAA +
Preference number: 2 (lower is better)
Translates to: RKHCGCTFLECLIRIILPVQRLP*KCLQIQ
Trigger: TTGGATTTGGAGGCATTTGCATGGTAGTCTTTGAAC...TGGAAGGATAATTCTGATAAGGCACTCAAGAAACGTACAACCACAGTGCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR GCA 90 bp TGGTTTAAAAGTAGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGAACTGACTGGCTTGTaGTATGTTGGAAACCAAAAT +
Preference number: 2 (lower is better)
Translates to: WFKSRYLDCLEAFNSALWELTGL*YVGNQN
Trigger: ATTTTGGTTTCCAACATAGCACAAGCCAGTCAGTTC...CCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACTTTTAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR GCA 90 bp TGGTTTAAAAGTAGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGTGCAAAGAGGGCTTATaGAATTCTTCAGACCCTATT +
Preference number: 2 (lower is better)
Translates to: WFKSRYLDCLEAFNSALWCKEGL*NSSDPI
Trigger: AATAGGGTCTGAAGAATTGCATAAGCCCTCTTTGCA...CCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACTTTTAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTAGTCAAAGTTCCTAAATaGGAACACTGCCTTATGGAA +
Preference number: 2 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLVKVPK*EHCLME
Trigger: TTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR CCA 90 bp TGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTTATGAAATCTCCAACTaGGCACTTTTTCGGTATTCT +
Preference number: 2 (lower is better)
Translates to: WKHSTQLCGSIWSNFQVIYEISN*ALFRYS
Trigger: AGAATACCGAAAAAGTGCCCAGTTGGAGATTTCATA...AATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTAAGCAGCTTGGGATACTaGTTTACTATAAGGTATAGT +
Preference number: 2 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLSSLGY*FTIRYS
Trigger: ACTATACCTTATAGTAAACCAGTATCCCAAGCTGCT...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR CCA 90 bp TGGTTTAAAAGTAGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGAAATCTTCAAAAGGATaGGACAAAGACAGACAAGTT +
Preference number: 2 (lower is better)
Translates to: WFKSRYLDCLEAFNSALWKSSKG*DKDRQV
Trigger: AACTTGTCTGTCTTTGTCCCATCCTTTTGAAGATTT...CCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACTTTTAAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CCA 90 bp CAAGTGTTGTGCAAAGAGGGCTTATGCAATTCTTCAGACCCTATTTATTTTATTAGACTCCCGATAGGTTaGTTTAAAAGTAGATACCTA +
Preference number: 2 (lower is better)
Translates to: QVLCKEGLCNSSDPIYFIRLPIG*FKSRYL
Trigger: TAGGTATCTACTTTTAAACCAACCTATCGGGAGTCT...AATAAAATAAATAGGGTCTGAAGAATTGCATAAGCCCTCTTTGCACAACACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR GCA 72 bp ACCACATGTGCATGGAAGGGCCAGGTGATGAAGAGGTaGCCTTACCTCACAAAACCCCCATCCAGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: TTCAWKGQVMKR*PYLTKPPSSLG
Trigger: CCCCAGGCTGGATGGGGGTTTTGTGAGGTAAGGGCACCTCTTCATCACCTGGCCCTTCCATGCACATGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 72 bp ACAGCCGCTCAGCCAAGGAGTTCACTGATATCTGGATaGCTGTGTGGGCCAGCCTGTGTTTCATCTCCACTG +
Preference number: 3 (lower is better)
Translates to: TAAQPRSSLISG*LCGPACVSSPL
Trigger: CAGTGGAGATGAAACACAGGCTGGCCCACACAGCCATCCAGATATCAGTGAACTCCTTGGCTGAGCGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR TCA 72 bp ATGCGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGTaGACCCGTCCTGAAGGAATTTGGATTTGCCTGGCC +
Preference number: 3 (lower is better)
Translates to: MRRHVSFSQETL*TRPEGIWICLA
Trigger: GGCCAGGCAAATCCAAATTCCTTCAGGACGGGTTCACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR GCA 72 bp GACTGGCTTGTGCTATGTTGGAAACCAAAATCTCGATaGCCTCACCGGGTTCGTGGTGGCTCCCCTCTTTAC +
Preference number: 3 (lower is better)
Translates to: DWLVLCWKPKSR*PHRVRGGSPLY
Trigger: GTAAAGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAGCACAAGCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CAA 90 bp TCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGTGAACTTGGAACTTTGTTCATaGCTGCAGGTTTGGTGGCCT +
Preference number: 3 (lower is better)
Translates to: SPLAHAAACVFQSRDAVNLELCS*LQVWWP
Trigger: AGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAA...GTTCACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR GCA 72 bp ATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATaGGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGT +
Preference number: 3 (lower is better)
Translates to: MCTEKINIPIGP*GGMCLSVKRRC
Trigger: ACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 72 bp TTATACAGCCGCTCAGCCAAGGAGTTCACTGATATCTaGATGGCTGTGTGGGCCAGCCTGTGTTTCATCTCC +
Preference number: 3 (lower is better)
Translates to: LYSRSAKEFTDI*MAVWASLCFIS
Trigger: GGAGATGAAACACAGGCTGGCCCACACAGCCATCCAGATATCAGTGAACTCCTTGGCTGAGCGGCTGTATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 72 bp CGCTGTGAACCCGTCCTGAAGGAATTTGGATTTGCCTaGCCAGAGAGTCTGAACTGCAGCAAATTCCCACCA +
Preference number: 3 (lower is better)
Translates to: RCEPVLKEFGFA*PESLNCSKFPP
Trigger: TGGTGGGAATTTGCTGCAGTTCAGACTCTCTGGCCAGGCAAATCCAAATTCCTTCAGGACGGGTTCACAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 72 bp TGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTaGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAG +
Preference number: 3 (lower is better)
Translates to: CANVHREDQHPH*PMRRHVSFSQE
Trigger: CTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CAA 90 bp CAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGTGGTTATTCTGTTGTGACATCTGTGGCCACAACTGTTaGCTGGGAGGAAATACAGCC +
Preference number: 3 (lower is better)
Translates to: QAGGLCQAPNKWLFCCDICGHNC*LGGNTA
Trigger: GGCTGTATTTCCTCCCAGCAAACAGTTGTGGCCACA...GATGTCACAACAGAATAACCACTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR CAA 90 bp TTCCCACCACAGAACGACCACAACCACATGTGCATGGAAGGGCCAGGTGATGAATTGGAACTTTGTTCATaGCTGCAGGTTTGGTGGCCT +
Preference number: 3 (lower is better)
Translates to: FPPQNDHNHMCMEGPGDELELCS*LQVWWP
Trigger: AGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAA...TTCATCACCTGGCCCTTCCATGCACATGTGGTTGTGGTCGTTCTGTGGTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CAA 90 bp AGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAGATCAACATCCCCATaGGCCCATGCGGCGGCATGT +
Preference number: 3 (lower is better)
Translates to: RLPGSIQLSFVGAFGQTSRSTSP*AHAAAC
Trigger: ACATGCCGCCGCATGGGCCAATGGGGATGTTGATCT...GGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCAGGCAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CAA 90 bp ATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTCTTCAACATCTCTCTTCTaGGCTGCTGCTGTTTTCTTC +
Preference number: 3 (lower is better)
Translates to: MLETKISMPSPGSWWLPSSTSLF*AAAVFF
Trigger: GAAGAAAACAGCAGCAGCCAAGAAGAGAGATGTTGA...AGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532234.5
3UTR TCA 72 bp GAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATaGTGCTGGCTTATACAGCCGCTCAGCCAAGGAGTT +
Preference number: 3 (lower is better)
Translates to: EKEPELCAQVWL*CWLIQPLSQGV
Trigger: AACTCCTTGGCTGAGCGGCTGTATAAGCCAGCATCATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR TCA 72 bp GCCTGGGGAAGAGTGTCACTCTGTGGGAACCAATTCTaGTCAGTACATCTGGGTGAAAAGGAGCCTGAACTG +
Preference number: 3 (lower is better)
Translates to: AWGRVSLCGNQF*SVHLGEKEPEL
Trigger: CAGTTCAGGCTCCTTTTCACCCAGATGTACTGATCAGAATTGGTTCCCACAGAGTGACACTCTTCCCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 72 bp GATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGTaGTTATTCTGTTGTGACATCTGCCAGGCAATGCTT +
Preference number: 3 (lower is better)
Translates to: DQAGGLCQAPNK*LFCCDICQAML
Trigger: AAGCATTGCCTGGCAGATGTCACAACAGAATAACCACTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR CAA 90 bp GAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGGCAGGTTTGGTGGCCTaGTTCAAAATTCGGTCAAAT +
Preference number: 3 (lower is better)
Translates to: EKINIPIGPCGGMCLSVKAGLVA*FKIRSN
Trigger: ATTTGACCGAATTTTGAACAAGGCCACCAAACCTGC...CTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CAA 90 bp CAGCCAAGGAGTTCACTGATATCTGGATGGCTGTGTGGGCCAGCCTGTGTTTCACTGGCTTGTGCTATGTaGGAAACCAAAATCTCGATG +
Preference number: 3 (lower is better)
Translates to: QPRSSLISGWLCGPACVSLACAM*ETKISM
Trigger: CATCGAGATTTTGGTTTCCAACATAGCACAAGCCAG...TGAAACACAGGCTGGCCCACACAGCCATCCAGATATCAGTGAACTCCTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CAA 90 bp CAGCCAAGGAGTTCACTGATATCTGGATGGCTGTGTGGGCCAGCCTGTGTTTCAGATGAACTGACTGGCTaGTGCTATGTTGGAAACCAA +
Preference number: 3 (lower is better)
Translates to: QPRSSLISGWLCGPACVSDELTG*CYVGNQ
Trigger: TTGGTTTCCAACATAGCACAAGCCAGTCAGTTCATC...TGAAACACAGGCTGGCCCACACAGCCATCCAGATATCAGTGAACTCCTTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR GCA 72 bp AAGGAATTTGGATTTGCCTGGCCAGAGAGTCTGAACTaGAGCAAATTCCCACCACAGAACGACCACAACCAC +
Preference number: 3 (lower is better)
Translates to: KEFGFAWPESLN*SKFPPQNDHNH
Trigger: GTGGTTGTGGTCGTTCTGTGGTGGGAATTTGCTGCAGTTCAGACTCTCTGGCCAGGCAAATCCAAATTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR GCA 72 bp ATGAGACTGGTGGATGCAGATGAACTGACTGGCTTGTaGTATGTTGGAAACCAAAATCTCGATGCCCTCACC +
Preference number: 3 (lower is better)
Translates to: MRLVDADELTGL*YVGNQNLDALT
Trigger: GGTGAGGGCATCGAGATTTTGGTTTCCAACATAGCACAAGCCAGTCAGTTCATCTGCATCCACCAGTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 72 bp TCACCGGGTTCGTGGTGGCTCCCCTCTTTACTTATTTaGTCATTGGAACTTTGTTCATTGCTGCAGGTTTGG +
Preference number: 3 (lower is better)
Translates to: SPGSWWLPSLLI*SLELCSLLQVW
Trigger: CCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 72 bp TTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTaGTGGCTCCCCTCTTTACTTATTTGGTCATTGGAA +
Preference number: 3 (lower is better)
Translates to: LETKISMPSPGS*WLPSLLIWSLE
Trigger: TTCCAATGACCAAATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CAA 90 bp AGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCGATTATCAGGCGCCCTaGTTTGAGGTCAGAGTAAAC +
Preference number: 3 (lower is better)
Translates to: RLPGSIQLSFVGAFGQTSDYQAP*FEVRVN
Trigger: GTTTACTCTGACCTCAAACAAGGGCGCCTGATAATC...GGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCAGGCAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR TCA 72 bp GGTCTTCCCAGAGCTTTTAATGTGCAGACAGGCATGTaGACCTCTGATAAAGAGAGGGAAAATGGAGAGGCA +
Preference number: 3 (lower is better)
Translates to: GLPRAFNVQTGM*TSDKERENGEA
Trigger: TGCCTCTCCATTTTCCCTCTCTTTATCAGAGGTTCACATGCCTGTCTGCACATTAAAAGCTCTGGGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR GCA 72 bp GTCCCTTTACAACAGGTCTTCCCAGAGCTTTTAATGTaGAGACAGGCATGTGAACCTCTGATAAAGAGAGGG +
Preference number: 3 (lower is better)
Translates to: VPLQQVFPELLM*RQACEPLIKRG
Trigger: CCCTCTCTTTATCAGAGGTTCACATGCCTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR CAA 90 bp GAAGGAATTTGGATTTGCCTGGCCAGAGAGTCTGAACTGCAGCAAATTCCCACCCCCCTCTTTACTTATTaGGTCATTGGAACTTTGTTC +
Preference number: 3 (lower is better)
Translates to: EGIWICLARESELQQIPTPLFTY*VIGTLF
Trigger: GAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGG...GGTGGGAATTTGCTGCAGTTCAGACTCTCTGGCCAGGCAAATCCAAATTCCTTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR GCA 72 bp TCCTTACAAATTGCTACAATGCAGGTTTACCTGGGGTaGAAGCACAGCAAACACGTGCTTGTAGTCCATTTG +
Preference number: 3 (lower is better)
Translates to: SLQIATMQVYLG*KHSKHVLVVHL
Trigger: CAAATGGACTACAAGCACGTGTTTGCTGTGCTTGCACCCCAGGTAAACCTGCATTGTAGCAATTTGTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR CCA 72 bp GGCATGTGGATTTGGTCTGCCAAAACTCTTCACACGTaGCAGAAGTGTTCCAACAGATTGGTGAATTACACA +
Preference number: 3 (lower is better)
Translates to: GMWIWSAKTLHT*QKCSNRLVNYT
Trigger: TGTGTAATTCACCAATCTGTTGGAACACTTCTGCCACGTGTGAAGAGTTTTGGCAGACCAAATCCACATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532234.5
3UTR-3UTR CAA 90 bp AGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCTTCATTGCTGCAGGTTaGGTGGCCTTGTTCAAAATT +
Preference number: 3 (lower is better)
Translates to: RLPGSIQLSFVGAFGQTSFIAAG*VALFKI
Trigger: AATTTTGAACAAGGCCACCAAACCTGCAGCAATGAA...GGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCAGGCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CAA 90 bp ATGTGTCTTTCAGTCAAGAGACGCTGTGAACCCGTCCTGAAGGAATTTGGATTTGCATTCAACTCAGCTTaGTGGGAGCATTTGGTCAAA +
Preference number: 3 (lower is better)
Translates to: MCLSVKRRCEPVLKEFGFAFNSA*WEHLVK
Trigger: TTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGC...AAATCCAAATTCCTTCAGGACGGGTTCACAGCGTCTCTTGACTGAAAGACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CAA 90 bp TTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCCGATGTTCTCTTCTCTaGATTGATGATTCCTCAGAG +
Preference number: 3 (lower is better)
Translates to: LFCLCANVHREDQHPHWPRCSLL*IDDSSE
Trigger: CTCTGAGGAATCATCAATCAAGAGAAGAGAACATCG...GGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532234.5
3UTR-3UTR CAA 90 bp CCTCAACTTGTCCCTTTACAACAGGTCTTCCCAGAGCTTTTAATGTGCAGACAGTTTAAGGAGCACACTTaGGGAAATGTGGTTCTACTA +
Preference number: 3 (lower is better)
Translates to: PQLVPLQQVFPELLMCRQFKEHT*GNVVLL
Trigger: TAGTAGAACCACATTTCCCAAAGTGTGCTCCTTAAA...CTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAAGGGACAAGTTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR CAA 90 bp ATGTGTCTTTCAGTCAAGAGACGCTGTGAACCCGTCCTGAAGGAATTTGGATTTTTGGTCATTGGAACTTaGTTCATTGCTGCAGGTTTG +
Preference number: 3 (lower is better)
Translates to: MCLSVKRRCEPVLKEFGFLVIGT*FIAAGL
Trigger: CAAACCTGCAGCAATGAACAAAGTTCCAATGACCAA...AAATCCAAATTCCTTCAGGACGGGTTCACAGCGTCTCTTGACTGAAAGACACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CAA 90 bp TGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTCTGGCTTGTGCTATGTaGGAAACCAAAATCTCGATG +
Preference number: 3 (lower is better)
Translates to: WKHSTQLCGSIWSNFQVILACAM*ETKISM
Trigger: CATCGAGATTTTGGTTTCCAACATAGCACAAGCCAG...AATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CAA 90 bp TGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTGCTTTGTGGGAGCATTaGGTCAAACTTCCAAGTCAT +
Preference number: 3 (lower is better)
Translates to: WKHSTQLCGSIWSNFQVIALWEH*VKLPSH
Trigger: ATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGC...AATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR-3UTR CAA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTAGGTATGACTTTAAAGTaGGGAGGGCCATATGCAAAG +
Preference number: 3 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLGMTLK*GGPYAK
Trigger: CTTTGCATATGGCCCTCCCAACTTTAAAGTCATACC...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
3UTR-3UTR CAA 90 bp TGGTTTAAAAGTAGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGCAGGTTTGGTGGCCTaGTTCAAAATTCGGTCAAAT +
Preference number: 3 (lower is better)
Translates to: WFKSRYLDCLEAFNSALWAGLVA*FKIRSN
Trigger: ATTTGACCGAATTTTGAACAAGGCCACCAAACCTGC...CCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACTTTTAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR TCA 72 bp AGTTCCTGCAACGTGTGTGATTGCCTGTTATTTTTATaGAATCTCCAACTGGGCACTTTTTCGGTATTCTGC +
Preference number: 3 (lower is better)
Translates to: SSCNVCDCLLFL*NLQLGTFSVFC
Trigger: GCAGAATACCGAAAAAGTGCCCAGTTGGAGATTTCATAAAAATAACAGGCAATCACACACGTTGCAGGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR TCA 72 bp TGTTCTCAGTACTGTACACAGTTCCTGCAACGTGTGTaGTTGCCTGTTATTTTTATGAAATCTCCAACTGGG +
Preference number: 3 (lower is better)
Translates to: CSQYCTQFLQRV*LPVIFMKSPTG
Trigger: CCCAGTTGGAGATTTCATAAAAATAACAGGCAATCACACACGTTGCAGGAACTGTGTACAGTACTGAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR GCA 72 bp CCTCTTTACTTATTTGGTCATTGGAACTTTGTTCATTaGTGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTC +
Preference number: 3 (lower is better)
Translates to: PLYLFGHWNFVH*CRFGGLVQNSV
Trigger: GACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 72 bp TGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTGGTaGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGG +
Preference number: 3 (lower is better)
Translates to: WSLELCSLLQVW*PCSKFGQIFKR
Trigger: CCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 72 bp TACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTaGGAGCATTTGGTCAAACTTCCAAGTCATTGTTTT +
Preference number: 3 (lower is better)
Translates to: YLDCLEAFNSAL*EHLVKLPSHCF
Trigger: AAAACAATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR GCA 72 bp CTTTACTTATTTGGTCATTGGAACTTTGTTCATTGCTaGAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAA +
Preference number: 3 (lower is better)
Translates to: LYLFGHWNFVHC*RFGGLVQNSVK
Trigger: TTTGACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 72 bp TGTGTGATTGCCTGTTATTTTTATGAAATCTCCAACTaGGCACTTTTTCGGTATTCTGCAGATGATTCCAAC +
Preference number: 3 (lower is better)
Translates to: CVIACYFYEISN*ALFRYSADDSN
Trigger: GTTGGAATCATCTGCAGAATACCGAAAAAGTGCCCAGTTGGAGATTTCATAAAAATAACAGGCAATCACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CCA 72 bp ATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTaGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAA +
Preference number: 3 (lower is better)
Translates to: IWSLELCSLLQV*WPCSKFGQIFK
Trigger: TTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp CAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGTGGTTATTCTGTTGTGACATCCGCGGCTCCCATGCCTaGCCCGCCGCACAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: QAGGLCQAPNKWLFCCDIRGSHA*PAAQPS
Trigger: ACTCGGCTGTGCGGCGGGGCAGGCATGGGAGCCGCG...GATGTCACAACAGAATAACCACTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp TGGCTTGTGCTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTCGCGGCTCCCATGCCTaGCCCGCCGCACAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: WLVLCWKPKSRCPHRVRGRGSHA*PAAQPS
Trigger: ACTCGGCTGTGCGGCGGGGCAGGCATGGGAGCCGCG...ACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAGCACAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp CAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGTGGTTATTCTGTTGTGACATCCTGCTCGGGCATGGCTaGAGTGGAGTCGTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QAGGLCQAPNKWLFCCDILLGHG*SGVVGP
Trigger: GGGGCCAACGACTCCACTTCAGCCATGCCCGAGCAG...GATGTCACAACAGAATAACCACTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp CTATGCAGAATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGCGGGCCGCGGCTCGCTaGGCCGCTCAGACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LCRIIFDQAGGLCQAPNKRAAAR*AAQTGV
Trigger: CACACCTGTCTGAGCGGCGCAGCGAGCCGCGGCCCG...CTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTATTCTGCATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp GCTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCCCCTCACCGGGTTCGTaGTGGCTCCCCTCTTTACTT +
Preference number: 4 (lower is better)
Translates to: AMLETKISMPSPGSWWLPPSPGS*WLPSLL
Trigger: AAGTAAAGAGGGGAGCCACCACGAACCCGGTGAGGG...GGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAGC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp TGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACCGCGGCTCCCATGCCTaGCCCGCCGCACAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: CRFGGLVQNSVKSSKGWDRGSHA*PAAQPS
Trigger: ACTCGGCTGTGCGGCGGGGCAGGCATGGGAGCCGCG...GTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp GATCAGTACATCTGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATCGCCGCACAGCCGAGTaGGAGCAAGCTGGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: DQYIWVKRSLNCVLKCGYRRTAE*EQAGEQ
Trigger: CTGCTCGCCAGCTTGCTCGCACTCGGCTGTGCGGCG...ATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCAGATGTACTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp GGCTCCCCTCTTTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTCGGGCCGCGGCTCGCTaGGCCGCTCAGACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: GSPLYLFGHWNFVHCCRFRAAAR*AAQTGV
Trigger: CACACCTGTCTGAGCGGCGCAGCGAGCCGCGGCCCG...AAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp AGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACCCCTCACCGGGTTCGTaGTGGCTCCCCTCTTTACTT +
Preference number: 4 (lower is better)
Translates to: RSTSPLAHAAACVFQSRDPSPGS*WLPSLL
Trigger: AAGTAAAGAGGGGAGCCACCACGAACCCGGTGAGGG...GTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGTGAACTCACTGATATCTGGATaGCTGTGTGGGCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SPLAHAAACVFQSRDAVNSLISG*LCGPAC
Trigger: ACAGGCTGGCCCACACAGCCATCCAGATATCAGTGA...GTTCACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GCTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTCACTGATATCTGGATaGCTGTGTGGGCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: AMLETKISMPSPGSWWLPSLISG*LCGPAC
Trigger: ACAGGCTGGCCCACACAGCCATCCAGATATCAGTGA...GGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp ACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGTGGCTGTGAACCCGTCCTaGAGGAATTTGGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: TSPLAHAAACVFQSRDAVAVNPS*RNLDLP
Trigger: AGGCAAATCCAAATTCCTTCAGGACGGGTTCACAGC...CACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp ATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTCTACTGGTGGATGCAGATaGACTGACTGGCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: MLETKISMPSPGSWWLPSTGGCR*TDWLVL
Trigger: TAGCACAAGCCAGTCAGTTCATCTGCATCCACCAGT...AGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp ATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCAACTGGTGGATGCAGATaGACTGACTGGCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: MCQCAQRRSTSPLAHAAATGGCR*TDWLVL
Trigger: TAGCACAAGCCAGTCAGTTCATCTGCATCCACCAGT...TGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp ATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCAAGCCAAGGAGTTCACTaGTATCTGGATGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: MCQCAQRRSTSPLAHAAASQGVH*YLDGCV
Trigger: CACACAGCCATCCAGATATCAGTGAACTCCTTGGCT...TGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp AACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTCTTTACTTATCCTGGCCAGAGAGTCTaGACTGCAGCAAATTCCCAC +
Preference number: 4 (lower is better)
Translates to: NQNLDALTGFVVAPLFTYPGQRV*TAANSH
Trigger: GTGGGAATTTGCTGCAGTTCAGACTCTCTGGCCAGG...ATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp CTATGCAGAATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGCTGGAATCCCTGCCATaGCGAGCACTGTTCCGCGCC +
Preference number: 4 (lower is better)
Translates to: LCRIIFDQAGGLCQAPNKLESLP*RALFRA
Trigger: GGCGCGGAACAGTGCTCGGCATGGCAGGGATTCCAG...CTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTATTCTGCATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp GGCTATGATGCTGGCTTATACAGCCGCTCAGCCAAGGAGTTCACTGATATCTGGCTCTTATTTCCACATTaGAGCCTGGGCCATCCCCGC +
Preference number: 4 (lower is better)
Translates to: GYDAGLYSRSAKEFTDIWLLFPH*SLGHPR
Trigger: GCGGGGATGGCCCAGGCTGCAATGTGGAAATAAGAG...CCAGATATCAGTGAACTCCTTGGCTGAGCGGCTGTATAAGCCAGCATCATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp AGAAAGCACTGTGGTTGTACGTTTCTTGAGTGCCTTATCAGAATTATCCTTCCAAGACCCCAGACCCGCTaGCCCCTGGCTGGGCATCGC +
Preference number: 4 (lower is better)
Translates to: RKHCGCTFLECLIRIILPRPQTR*PLAGHR
Trigger: GCGATGCCCAGCCAGGGGCCAGCGGGTCTGGGGTCT...TGGAAGGATAATTCTGATAAGGCACTCAAGAAACGTACAACCACAGTGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp AACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTCTTTACTTATAACCCCCATCCAGCCTaGGGAAGAGTGTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: NQNLDALTGFVVAPLFTYNPHPA*GRVSLC
Trigger: ACAGAGTGACACTCTTCCCCAGGCTGGATGGGGGTT...ATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp GGCTATGATGCTGGCTTATACAGCCGCTCAGCCAAGGAGTTCACTGATATCTGGGCTCAAGTGTGGCTATaGTGCTGGCTTATACAGCCG +
Preference number: 4 (lower is better)
Translates to: GYDAGLYSRSAKEFTDIWAQVWL*CWLIQP
Trigger: CGGCTGTATAAGCCAGCATCATAGCCACACTTGAGC...CCAGATATCAGTGAACTCCTTGGCTGAGCGGCTGTATAAGCCAGCATCATAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp CCTCAACTTGTCCCTTTACAACAGGTCTTCCCAGAGCTTTTAATGTGCAGACAGCCACCAGGGTGCCGGTaGAGCCCGTGGATAACTTCA +
Preference number: 4 (lower is better)
Translates to: PQLVPLQQVFPELLMCRQPPGCR*SPWITS
Trigger: TGAAGTTATCCACGGGCTGCACCGGCACCCTGGTGG...CTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAAGGGACAAGTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp CTATGCAGAATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGGAGGACATGCTTCTCTaGCACCAGGGTGCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: LCRIIFDQAGGLCQAPNKEDMLL*HQGAGA
Trigger: TGCACCGGCACCCTGGTGGCAGAGAAGCATGTCCTC...CTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTATTCTGCATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp TGGTTTAAAAGTAGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGCGCCGCACAGCCGAGTaGGAGCAAGCTGGCGAGCAG +
Preference number: 4 (lower is better)
Translates to: WFKSRYLDCLEAFNSALWRRTAE*EQAGEQ
Trigger: CTGCTCGCCAGCTTGCTCGCACTCGGCTGTGCGGCG...CCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACTTTTAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp ACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGTGGTGTTTCATCTCCACTaGCTTCACAGTACTGACCTT +
Preference number: 4 (lower is better)
Translates to: TSPLAHAAACVFQSRDAVVFHLH*LHSTDL
Trigger: AAGGTCAGTACTGTGAAGGCAGTGGAGATGAAACAC...CACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp GAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGCAGGTGATGAAGAGGTaGCCTTACCTCACAAAACCC +
Preference number: 4 (lower is better)
Translates to: EKINIPIGPCGGMCLSVKQVMKR*PYLTKP
Trigger: GGGTTTTGTGAGGTAAGGGCACCTCTTCATCACCTG...CTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp CTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGATCCCCATTGGCCCATaGGGCGGCATGTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LFMCQCAQRRSTSPLAHAIPIGP*GGMCLS
Trigger: TGAAAGACACATGCCGCCGCATGGGCCAATGGGGAT...CGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp TGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATGATGCTGGCTTAATCCCCATTGGCCCATaGGGCGGCATGTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: WVKRSLNCVLKCGYDAGLIPIGP*GGMCLS
Trigger: TGAAAGACACATGCCGCCGCATGGGCCAATGGGGAT...TAAGCCAGCATCATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp ATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCACCGGGTTCGTGGTaGCTCCCCTCTTTACTTATT +
Preference number: 4 (lower is better)
Translates to: MCTEKINIPIGPCGGMCLSPGSW*LPSLLI
Trigger: AATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGA...AAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CAGCCAAGGAGTTCACTGATATCTGGATGGCTGTGTGGGCCAGCCTGTGTTTCAACAACCACATGTGCATaGAAGGGCCAGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: QPRSSLISGWLCGPACVSTTTCA*KGQVMK
Trigger: CTTCATCACCTGGCCCTTCCATGCACATGTGGTTGT...TGAAACACAGGCTGGCCCACACAGCCATCCAGATATCAGTGAACTCCTTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp ATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTCTTGTGGGAACCAATTCTaGTCAGTACATCTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: MLETKISMPSPGSWWLPSCGNQF*SVHLGE
Trigger: TTCACCCAGATGTACTGATCAGAATTGGTTCCCACA...AGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp CCTCAACTTGTCCCTTTACAACAGGTCTTCCCAGAGCTTTTAATGTGCAGACAGCCACCTGCGTCTCTGTaGGGCTGCCATTGGCATAGA +
Preference number: 4 (lower is better)
Translates to: PQLVPLQQVFPELLMCRQPPASL*GCHWHR
Trigger: TCTATGCCAATGGCAGCCGCACAGAGACGCAGGTGG...CTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAAGGGACAAGTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp CTATGCAGAATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGCCTTGGGCACATGGGTaGGTTTCACCCGGATCCACT +
Preference number: 4 (lower is better)
Translates to: LCRIIFDQAGGLCQAPNKPWAHG*VSPGST
Trigger: AGTGGATCCGGGTGAAACGCACCCATGTGCCCAAGG...CTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTATTCTGCATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTACTGCCCCCTGGCAGCTaGTTAGCAGGAGGGCTCACC +
Preference number: 4 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLLPPGS*LAGGLT
Trigger: GGTGAGCCCTCCTGCTAAGCAGCTGCCAGGGGGCAG...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp CTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTTGGAACTTTGTTCATTaGTGCAGGTTTGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LCWKPKSRCPHRVRGGSPWNFVH*CRFGGL
Trigger: AAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCA...AGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTAAGACCCGCTGGCCCCTaGCTGGGCATCGCATTGCTG +
Preference number: 4 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLRPAGP*LGIALL
Trigger: CAGCAATGCGATGCCCAGCCAGGGGCCAGCGGGTCT...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp TGGCTTGTGCTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGTCCTGGAACCTAGTTaGTATTCAGGAGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: WLVLCWKPKSRCPHRVRGVLEPS*YSGGGG
Trigger: ACCACCACCTCCTGAATACCAACTAGGTTCCAGGAC...ACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAGCACAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGCTTCTAGCCAGGTCCTaGAACCTAGTTGGTATTCAG +
Preference number: 4 (lower is better)
Translates to: EKINIPIGPCGGMCLSVKLLARS*NLVGIQ
Trigger: CTGAATACCAACTAGGTTCCAGGACCTGGCTAGAAG...CTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CAGCCAAGGAGTTCACTGATATCTGGATGGCTGTGTGGGCCAGCCTGTGTTTCAGCAGCAGGACTCAAATaGGGTCATGAAGCCATTGAA +
Preference number: 4 (lower is better)
Translates to: QPRSSLISGWLCGPACVSAAGLK*GHEAIE
Trigger: TTCAATGGCTTCATGACCCCATTTGAGTCCTGCTGC...TGAAACACAGGCTGGCCCACACAGCCATCCAGATATCAGTGAACTCCTTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GAAGGAATTTGGATTTGCCTGGCCAGAGAGTCTGAACTGCAGCAAATTCCCACCGAGTTCACTGATATCTaGATGGCTGTGTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EGIWICLARESELQQIPTEFTDI*MAVWAS
Trigger: GCTGGCCCACACAGCCATCCAGATATCAGTGAACTC...GGTGGGAATTTGCTGCAGTTCAGACTCTCTGGCCAGGCAAATCCAAATTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp ATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTCTTCTGATCAGTACATCTaGGTGAAAAGGAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: MLETKISMPSPGSWWLPSSDQYI*VKRSLN
Trigger: GTTCAGGCTCCTTTTCACCCAGATGTACTGATCAGA...AGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGTGAACAAGAGTGTCACTCTGTaGGAACCAATTCTGATCAGT +
Preference number: 4 (lower is better)
Translates to: SPLAHAAACVFQSRDAVNKSVTL*EPILIS
Trigger: ACTGATCAGAATTGGTTCCCACAGAGTGACACTCTT...GTTCACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TTCCCACCACAGAACGACCACAACCACATGTGCATGGAAGGGCCAGGTGATGAAGAATTTGGATTTGCCTaGCCAGAGAGTCTGAACTGC +
Preference number: 4 (lower is better)
Translates to: FPPQNDHNHMCMEGPGDEEFGFA*PESLNC
Trigger: GCAGTTCAGACTCTCTGGCCAGGCAAATCCAAATTC...TTCATCACCTGGCCCTTCCATGCACATGTGGTTGTGGTCGTTCTGTGGTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CAA 72 bp ATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATaGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: MCQCAQRRSTSP*AHAAACVFQSR
Trigger: TCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp GCTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTTCCTGCAACGTGTGTaGTTGCCTGTTATTTTTATG +
Preference number: 4 (lower is better)
Translates to: AMLETKISMPSPGSWWLPFLQRV*LPVIFM
Trigger: CATAAAAATAACAGGCAATCACACACGTTGCAGGAA...GGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp CAGCCAAGGAGTTCACTGATATCTGGATGGCTGTGTGGGCCAGCCTGTGTTTCATGTGGGAACCAATTCTaGTCAGTACATCTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: QPRSSLISGWLCGPACVSCGNQF*SVHLGE
Trigger: TTCACCCAGATGTACTGATCAGAATTGGTTCCCACA...TGAAACACAGGCTGGCCCACACAGCCATCCAGATATCAGTGAACTCCTTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp GTCAAAGTTCCTAAATGGGAACACTGCCTTATGGAAGCATTAAAGATCAGGCACGAGCCCTGGAATCCCTaGCATGCCGAGCACTGTTCC +
Preference number: 4 (lower is better)
Translates to: VKVPKWEHCLMEALKIRHEPWNP*HAEHCS
Trigger: GGAACAGTGCTCGGCATGGCAGGGATTCCAGGGCTC...GTGCCTGATCTTTAATGCTTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp CCTCAACTTGTCCCTTTACAACAGGTCTTCCCAGAGCTTTTAATGTGCAGACAGGCGTCTCTGTGCGGCTaGCATTGGCATAGAGCGTTT +
Preference number: 4 (lower is better)
Translates to: PQLVPLQQVFPELLMCRQASLCG*HWHRAF
Trigger: AAACGCTCTATGCCAATGGCAGCCGCACAGAGACGC...CTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAAGGGACAAGTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTATCTCTGCCACCAGGGTaGCGGTGCAGCCCGTGGATA +
Preference number: 4 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLSLPPG*RCSPWI
Trigger: TATCCACGGGCTGCACCGGCACCCTGGTGGCAGAGA...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp CAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGTGGTTATTCTGTTGTGACATCAAGACCCTTAATTGCTaGCAGGAGGGAACACTGTGT +
Preference number: 4 (lower is better)
Translates to: QAGGLCQAPNKWLFCCDIKTLNC*QEGTLC
Trigger: ACACAGTGTTCCCTCCTGGCAGCAATTAAGGGTCTT...GATGTCACAACAGAATAACCACTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp CAGCCAAGGAGTTCACTGATATCTGGATGGCTGTGTGGGCCAGCCTGTGTTTCACATGTGGATTTGGTCTaGCAAAACTCTTCACACGTG +
Preference number: 4 (lower is better)
Translates to: QPRSSLISGWLCGPACVSHVDLV*QNSSHV
Trigger: CACGTGTGAAGAGTTTTGGCAGACCAAATCCACATG...TGAAACACAGGCTGGCCCACACAGCCATCCAGATATCAGTGAACTCCTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp GAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGGTGTTTCATCTCCACTaGCTTCACAGTACTGACCTT +
Preference number: 4 (lower is better)
Translates to: EKINIPIGPCGGMCLSVKVFHLH*LHSTDL
Trigger: AAGGTCAGTACTGTGAAGGCAGTGGAGATGAAACAC...CTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp GAAGGAATTTGGATTTGCCTGGCCAGAGAGTCTGAACTGCAGCAAATTCCCACCCCAGAGAGTCTGAACTaGAGCAAATTCCCACCACAG +
Preference number: 4 (lower is better)
Translates to: EGIWICLARESELQQIPTPESLN*SKFPPQ
Trigger: CTGTGGTGGGAATTTGCTGCAGTTCAGACTCTCTGG...GGTGGGAATTTGCTGCAGTTCAGACTCTCTGGCCAGGCAAATCCAAATTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp CTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGCCAGAGAGTCTGAACTaGAGCAAATTCCCACCACAG +
Preference number: 4 (lower is better)
Translates to: LFMCQCAQRRSTSPLAHAPESLN*SKFPPQ
Trigger: CTGTGGTGGGAATTTGCTGCAGTTCAGACTCTCTGG...CGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp GCTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCAGTAGATACCTAGATTaGCTGGAAGCATTCAACTCA +
Preference number: 4 (lower is better)
Translates to: AMLETKISMPSPGSWWLPSRYLD*LEAFNS
Trigger: TGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACT...GGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp AGAAAGCACTGTGGTTGTACGTTTCTTGAGTGCCTTATCAGAATTATCCTTCCACGGGCATGGCTGAAGTaGAGTCGTTGGCCCCTCGAC +
Preference number: 4 (lower is better)
Translates to: RKHCGCTFLECLIRIILPRAWLK*SRWPLD
Trigger: GTCGAGGGGCCAACGACTCCACTTCAGCCATGCCCG...TGGAAGGATAATTCTGATAAGGCACTCAAGAAACGTACAACCACAGTGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp ATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTCTAAAACTCTTCACACGTaGCAGAAGTGTTCCAACAGA +
Preference number: 4 (lower is better)
Translates to: MLETKISMPSPGSWWLPSKTLHT*QKCSNR
Trigger: TCTGTTGGAACACTTCTGCCACGTGTGAAGAGTTTT...AGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp ATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTCTATCACTTCAGGCATGTaGATTTGGTCTGCCAAAACT +
Preference number: 4 (lower is better)
Translates to: MLETKISMPSPGSWWLPSITSGM*IWSAKT
Trigger: AGTTTTGGCAGACCAAATCCACATGCCTGAAGTGAT...AGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp AACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTCTTTACTTATCTTCTAGCCAGGTCCTaGAACCTAGTTGGTATTCAG +
Preference number: 4 (lower is better)
Translates to: NQNLDALTGFVVAPLFTYLLARS*NLVGIQ
Trigger: CTGAATACCAACTAGGTTCCAGGACCTGGCTAGAAG...ATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GATCAGTACATCTGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATGAGTTCACTGATATCTaGATGGCTGTGTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DQYIWVKRSLNCVLKCGYEFTDI*MAVWAS
Trigger: GCTGGCCCACACAGCCATCCAGATATCAGTGAACTC...ATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCAGATGTACTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CAA 72 bp ACTGCAGCATGGTGTTTCTGGCGATGTTCTCTTCTCTaGATTGATGATTCCTCAGAGCCTGCCCACCTCCTA +
Preference number: 4 (lower is better)
Translates to: TAAWCFWRCSLL*IDDSSEPAHLL
Trigger: TAGGAGGTGGGCAGGCTCTGAGGAATCATCAATCAAGAGAAGAGAACATCGCCAGAAACACCATGCTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532234.5
CDS-3UTR TCA 90 bp CTATGCAGAATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGCATCTCCACTACTGCTaGGGATGTAGATGCCCACCT +
Preference number: 4 (lower is better)
Translates to: LCRIIFDQAGGLCQAPNKHLHYC*GCRCPP
Trigger: AGGTGGGCATCTACATCCTCAGCAGTAGTGGAGATG...CTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTATTCTGCATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR TCA 90 bp GAGCACACTTTGGGAAATGTGGTTCTACTAGCCTTACTAGGCAAATATGCTTCTTGCAGTGGGCAGCTGTaGGGACATGCTTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: EHTLGNVVLLALLGKYASCSGQL*GHASLP
Trigger: TGGCAGAGAAGCATGTCCTCACAGCTGCCCACTGCA...AGAAGCATATTTGCCTAGTAAGGCTAGTAGAACCACATTTCCCAAAGTGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR TCA 90 bp CCTCAACTTGTCCCTTTACAACAGGTCTTCCCAGAGCTTTTAATGTGCAGACAGTTCACCCGGATCCACTaGAATTTCATCTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PQLVPLQQVFPELLMCRQFTRIH*NFICSG
Trigger: GCCCGAGCAGATGAAATTTCAGTGGATCCGGGTGAA...CTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAAGGGACAAGTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR TCA 90 bp AGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCGCTCAAGTGTGGCTATaGTGCTGGCTTATACAGCCG +
Preference number: 4 (lower is better)
Translates to: RYLDCLEAFNSALWEHLVAQVWL*CWLIQP
Trigger: CGGCTGTATAAGCCAGCATCATAGCCACACTTGAGC...GACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp CAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGTGGTTATTCTGTTGTGACATCTTCTGTTGTGACATCTaGCAGGCAATGCTTCCATTG +
Preference number: 4 (lower is better)
Translates to: QAGGLCQAPNKWLFCCDIFCCDI*QAMLPL
Trigger: CAATGGAAGCATTGCCTGGCAGATGTCACAACAGAA...GATGTCACAACAGAATAACCACTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp AACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTCTTTACTTATCATGTGGATTTGGTCTaGCAAAACTCTTCACACGTG +
Preference number: 4 (lower is better)
Translates to: NQNLDALTGFVVAPLFTYHVDLV*QNSSHV
Trigger: CACGTGTGAAGAGTTTTGGCAGACCAAATCCACATG...ATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp AGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCGACCACAACCACATGTaGATGGAAGGGCCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: RYLDCLEAFNSALWEHLVDHNHM*MEGPGD
Trigger: ATCACCTGGCCCTTCCATGCACATGTGGTTGTGGTC...GACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GAGCACACTTTGGGAAATGTGGTTCTACTAGCCTTACTAGGCAAATATGCTTCTAAGGAAGAGGAGCCCTaGAATCCCTGCCATGCCGAG +
Preference number: 4 (lower is better)
Translates to: EHTLGNVVLLALLGKYASKEEEP*NPCHAE
Trigger: CTCGGCATGGCAGGGATTCCAGGGCTCCTCTTCCTT...AGAAGCATATTTGCCTAGTAAGGCTAGTAGAACCACATTTCCCAAAGTGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp CTATGCAGAATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGTGCCGGTGCAGCCCGTaGATAACTTCACTGATGTTG +
Preference number: 4 (lower is better)
Translates to: LCRIIFDQAGGLCQAPNKCRCSP*ITSLML
Trigger: CAACATCAGTGAAGTTATCCACGGGCTGCACCGGCA...CTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTATTCTGCATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTCTGAAGTGGAGTCGTTaGCCCCTCGACCACCATCTT +
Preference number: 4 (lower is better)
Translates to: SSRKTSRKSPRECLSDSALKWSR*PLDHHL
Trigger: AAGATGGTGGTCGAGGGGCCAACGACTCCACTTCAG...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp CAGCCAAGGAGTTCACTGATATCTGGATGGCTGTGTGGGCCAGCCTGTGTTTCAAAAACTCTTCACACGTaGCAGAAGTGTTCCAACAGA +
Preference number: 4 (lower is better)
Translates to: QPRSSLISGWLCGPACVSKTLHT*QKCSNR
Trigger: TCTGTTGGAACACTTCTGCCACGTGTGAAGAGTTTT...TGAAACACAGGCTGGCCCACACAGCCATCCAGATATCAGTGAACTCCTTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CAGCCAAGGAGTTCACTGATATCTGGATGGCTGTGTGGGCCAGCCTGTGTTTCATTATGTCTTTGTTGGTaGGCATCACTTCAGGCATGT +
Preference number: 4 (lower is better)
Translates to: QPRSSLISGWLCGPACVSLCLCW*ASLQAC
Trigger: ACATGCCTGAAGTGATGCCCACCAACAAAGACATAA...TGAAACACAGGCTGGCCCACACAGCCATCCAGATATCAGTGAACTCCTTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp AGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCGGACTAGGCCAGGGTTaGCACACAGGTCTCATTCTA +
Preference number: 4 (lower is better)
Translates to: RLPGSIQLSFVGAFGQTSGLGQG*HTGLIL
Trigger: TAGAATGAGACCTGTGTGCCAACCCTGGCCTAGTCC...GGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCAGGCAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGACTGATGGTCAAGATTaGGGTGTTCTCAGTACTGTA +
Preference number: 4 (lower is better)
Translates to: EKINIPIGPCGGMCLSVKTDGQD*GVLSTV
Trigger: TACAGTACTGAGAACACCCCAATCTTGACCATCAGT...CTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CCTTTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGTTCCACATTGCAGCCTaGGCCATCCCCGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: PLFCLCANVHREDQHPHWFHIAA*AIPAVK
Trigger: TTTCACTGCGGGGATGGCCCAGGCTGCAATGTGGAA...CCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GGCTATGATGCTGGCTTATACAGCCGCTCAGCCAAGGAGTTCACTGATATCTGGATTCTGACACTCACTTaGTTTTTGGCAGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: GYDAGLYSRSAKEFTDIWILTLT*FLAAGL
Trigger: GAGTCCTGCTGCCAAAAACCAAGTGAGTGTCAGAAT...CCAGATATCAGTGAACTCCTTGGCTGAGCGGCTGTATAAGCCAGCATCATAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTGATCAACATCCCCATTaGCCCATGCGGCGGCATGTG +
Preference number: 4 (lower is better)
Translates to: WKHSTQLCGSIWSNFQVIDQHPH*PMRRHV
Trigger: CACATGCCGCCGCATGGGCCAATGGGGATGTTGATC...AATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CAA 72 bp CTCACCGGGTTCGTGGTGGCTCCCCTCTTTACTTATTaGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: LTGFVVAPLFTY*VIGTLFIAAGL
Trigger: CAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp CCTCAACTTGTCCCTTTACAACAGGTCTTCCCAGAGCTTTTAATGTGCAGACAGGTGCAGACAGGCATGTaGACCTCTGATAAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PQLVPLQQVFPELLMCRQVQTGM*TSDKER
Trigger: CCTCTCTTTATCAGAGGTTCACATGCCTGTCTGCAC...CTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAAGGGACAAGTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR TCA 90 bp ATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTGCCTGTTATTTTTATaGAATCTCCAACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: MCTEKINIPIGPCGGMCLCLLFL*NLQLGT
Trigger: AGTGCCCAGTTGGAGATTTCATAAAAATAACAGGCA...AAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp CTATGCAGAATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGTTTCGCTCCCACTTCTaGTGCTGTCTCTTCCACATC +
Preference number: 4 (lower is better)
Translates to: LCRIIFDQAGGLCQAPNKFRSHF*CCLFHI
Trigger: GATGTGGAAGAGACAGCAGCAGAAGTGGGAGCGAAA...CTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTATTCTGCATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp TGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATGATGCTGGCTTATGGAACTTTGTTCATTaGTGCAGGTTTGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: WVKRSLNCVLKCGYDAGLWNFVH*CRFGGL
Trigger: AAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCA...TAAGCCAGCATCATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp GGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTGGACCACAACCACATGTaGATGGAAGGGCCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: GSIQLSFVGAFGQTSKSLDHNHM*MEGPGD
Trigger: ATCACCTGGCCCTTCCATGCACATGTGGTTGTGGTC...CAATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTAGGTATGCAGGCCAAGTaGGTTTCCAGGGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLGMQAK*VSRGHC
Trigger: ACAGTGCCCCCTGGAAACCCACTTGGCCTGCATACC...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp CCTCAACTTGTCCCTTTACAACAGGTCTTCCCAGAGCTTTTAATGTGCAGACAGTGGCCTCTTCGTAAGTaGGCAGTGGAGTTCCCTTAT +
Preference number: 4 (lower is better)
Translates to: PQLVPLQQVFPELLMCRQWPLRK*AVEFPY
Trigger: ATAAGGGAACTCCACTGCCCACTTACGAAGAGGCCA...CTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAAGGGACAAGTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp CTATGCAGAATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGCTGTGCGGCTGCCATTaGCATAGAGCGTTTCATAAG +
Preference number: 4 (lower is better)
Translates to: LCRIIFDQAGGLCQAPNKLCGCH*HRAFHK
Trigger: CTTATGAAACGCTCTATGCCAATGGCAGCCGCACAG...CTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTATTCTGCATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp GAGCACACTTTGGGAAATGTGGTTCTACTAGCCTTACTAGGCAAATATGCTTCTTCATCTGCTCGGGCATaGCTGAAGTGGAGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: EHTLGNVVLLALLGKYASSSARA*LKWSRW
Trigger: CCAACGACTCCACTTCAGCCATGCCCGAGCAGATGA...AGAAGCATATTTGCCTAGTAAGGCTAGTAGAACCACATTTCCCAAAGTGTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTACAACCCTTGGGCACATaGGTGCGTTTCACCCGGATC +
Preference number: 4 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLQPLGT*VRFTRI
Trigger: GATCCGGGTGAAACGCACCCATGTGCCCAAGGGTTG...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR TCA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTAGTGGAGTTCCCTTATaGCACTGGGGTCCACATGAA +
Preference number: 4 (lower is better)
Translates to: SSRKTSRKSPRECLSDSASGVPL*HWGPHE
Trigger: TTCATGTGGACCCCAGTGTCATAAGGGAACTCCACT...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR TCA 90 bp GTCAAAGTTCCTAAATGGGAACACTGCCTTATGGAAGCATTAAAGATCAGGCACCATTGGCATTGCCCTTaGTCCAACCCTTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: VKVPKWEHCLMEALKIRHHWHCP*SNPWAH
Trigger: ATGTGCCCAAGGGTTGGATCAAGGGCAATGCCAATG...GTGCCTGATCTTTAATGCTTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR TCA 90 bp CTATGCAGAATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGGTGGTTATTCTGTTGTaGCATCTGCCAGGCAATGCT +
Preference number: 4 (lower is better)
Translates to: LCRIIFDQAGGLCQAPNKVVILL*HLPGNA
Trigger: AGCATTGCCTGGCAGATGTCACAACAGAATAACCAC...CTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTATTCTGCATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR TCA 90 bp TGGCTTGTGCTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGTTCCAACAGATTGGTaGATTACACATAAGGTATCC +
Preference number: 4 (lower is better)
Translates to: WLVLCWKPKSRCPHRVRGVPTDW*ITHKVS
Trigger: GGATACCTTATGTGTAATTCACCAATCTGTTGGAAC...ACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAGCACAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532234.5
CDS-3UTR TCA 90 bp CCTTTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGAGCCAAGGAGTTCACTaGTATCTGGATGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PLFCLCANVHREDQHPHWSQGVH*YLDGCV
Trigger: CACACAGCCATCCAGATATCAGTGAACTCCTTGGCT...CCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp TTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACAAAGACACCTGGCCAGAGAGTCTaGACTGCAGCAAATTCCCAC +
Preference number: 4 (lower is better)
Translates to: LVALFKIRSNLQKDGTKTPGQRV*TAANSH
Trigger: GTGGGAATTTGCTGCAGTTCAGACTCTCTGGCCAGG...TGTCTTTGTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp TGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACAGTCAAGAGACGCTGTaGACCCGTCCTGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: CRFGGLVQNSVKSSKGWDSQETL*TRPEGI
Trigger: AATTCCTTCAGGACGGGTTCACAGCGTCTCTTGACT...GTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp CCTTTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGTCAGGCGCCCTTGTTTaGGGTCAGAGTAAACAGACA +
Preference number: 4 (lower is better)
Translates to: PLFCLCANVHREDQHPHWSGALV*GQSKQT
Trigger: TGTCTGTTTACTCTGACCTCAAACAAGGGCGCCTGA...CCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTGTGGCCACAACTGTTTaGTGGGAGGAAATACAGCCT +
Preference number: 4 (lower is better)
Translates to: SSRKTSRKSPRECLSDSAVATTV*WEEIQP
Trigger: AGGCTGTATTTCCTCCCAGCAAACAGTTGTGGCCAC...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp AACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTCTTTACTTATGAACTGACTGGCTTGTaGTATGTTGGAAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: NQNLDALTGFVVAPLFTYELTGL*YVGNQN
Trigger: ATTTTGGTTTCCAACATAGCACAAGCCAGTCAGTTC...ATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp TGGTTTAAAAGTAGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGCTCTTATTTCCACATTaGAGCCTGGGCCATCCCCGC +
Preference number: 4 (lower is better)
Translates to: WFKSRYLDCLEAFNSALWLLFPH*SLGHPR
Trigger: GCGGGGATGGCCCAGGCTGCAATGTGGAAATAAGAG...CCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACTTTTAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp TTCCCACCACAGAACGACCACAACCACATGTGCATGGAAGGGCCAGGTGATGAAATGAAGCCATTGAAATaGACAGCTCTTATTTCCACA +
Preference number: 4 (lower is better)
Translates to: FPPQNDHNHMCMEGPGDEMKPLK*TALIST
Trigger: TGTGGAAATAAGAGCTGTGCATTTCAATGGCTTCAT...TTCATCACCTGGCCCTTCCATGCACATGTGGTTGTGGTCGTTCTGTGGTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp AGAAAGCACTGTGGTTGTACGTTTCTTGAGTGCCTTATCAGAATTATCCTTCCACCATCGTGTATGCAGTaGGCAGCTGTGAGGACATGC +
Preference number: 4 (lower is better)
Translates to: RKHCGCTFLECLIRIILPPSCMQ*AAVRTC
Trigger: GCATGTCCTCACAGCTGCCCACTGCATACACGATGG...TGGAAGGATAATTCTGATAAGGCACTCAAGAAACGTACAACCACAGTGCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTCAATGCAGGTTTACCTaGGGTGCAAGCACAGCAAAC +
Preference number: 4 (lower is better)
Translates to: SSRKTSRKSPRECLSDSAQCRFT*GASTAN
Trigger: GTTTGCTGTGCTTGCACCCCAGGTAAACCTGCATTG...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp ATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTATGAAATCTCCAACTaGGCACTTTTTCGGTATTCT +
Preference number: 4 (lower is better)
Translates to: MCTEKINIPIGPCGGMCLYEISN*ALFRYS
Trigger: AGAATACCGAAAAAGTGCCCAGTTGGAGATTTCATA...AAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACAAAGACAGGGACTAGGCCAGGGTTaGCACACAGGTCTCATTCTA +
Preference number: 4 (lower is better)
Translates to: WWPCSKFGQIFKRMGQRQGLGQG*HTGLIL
Trigger: TAGAATGAGACCTGTGTGCCAACCCTGGCCTAGTCC...CTGTCTTTGTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTGGCTCCCCTAAATCTTCAAAAGGATaGGACAAAGACAGACAAGTT +
Preference number: 4 (lower is better)
Translates to: LCWKPKSRCPHRVRGGSPKSSKG*DKDRQV
Trigger: AACTTGTCTGTCTTTGTCCCATCCTTTTGAAGATTT...AGGGGAGCCACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GATCAGTACATCTGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATTTGCTGCAGGTTTGGTaGCCTTGTTCAAAATTCGGT +
Preference number: 4 (lower is better)
Translates to: DQYIWVKRSLNCVLKCGYLLQVW*PCSKFG
Trigger: ACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAA...ATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCAGATGTACTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GTGGATGCAGATGAACTGACTGGCTTGTGCTATGTTGGAAACCAAAATCTCGATTCACCGGGTTCGTGGTaGCTCCCCTCTTTACTTATT +
Preference number: 4 (lower is better)
Translates to: VDADELTGLCYVGNQNLDSPGSW*LPSLLI
Trigger: AATAAGTAAAGAGGGGAGCCACCACGAACCCGGTGA...ATCGAGATTTTGGTTTCCAACATAGCACAAGCCAGTCAGTTCATCTGCATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GGCTCCCCTCTTTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTATCTGGATGGCTGTGTaGGCCAGCCTGTGTTTCATC +
Preference number: 4 (lower is better)
Translates to: GSPLYLFGHWNFVHCCRFIWMAV*ASLCFI
Trigger: GATGAAACACAGGCTGGCCCACACAGCCATCCAGAT...AAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GTGGATGCAGATGAACTGACTGGCTTGTGCTATGTTGGAAACCAAAATCTCGATCGTCCTGAAGGAATTTaGATTTGCCTGGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: VDADELTGLCYVGNQNLDRPEGI*ICLARE
Trigger: CTCTCTGGCCAGGCAAATCCAAATTCCTTCAGGACG...ATCGAGATTTTGGTTTCCAACATAGCACAAGCCAGTCAGTTCATCTGCATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTGCGTCCTGAAGGAATTTaGATTTGCCTGGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GSIQLSFVGAFGQTSKSLRPEGI*ICLARE
Trigger: CTCTCTGGCCAGGCAAATCCAAATTCCTTCAGGACG...CAATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp CCTTTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGTGGATGCAGATGAACTaGCTGGCTTGTGCTATGTTG +
Preference number: 4 (lower is better)
Translates to: PLFCLCANVHREDQHPHWWMQMN*LACAML
Trigger: CAACATAGCACAAGCCAGTCAGTTCATCTGCATCCA...CCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp TGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACTGGATGCAGATGAACTaGCTGGCTTGTGCTATGTTG +
Preference number: 4 (lower is better)
Translates to: CRFGGLVQNSVKSSKGWDWMQMN*LACAML
Trigger: CAACATAGCACAAGCCAGTCAGTTCATCTGCATCCA...GTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp TGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTTCAGGCGCCCTTGTTTaGGGTCAGAGTAAACAGACA +
Preference number: 4 (lower is better)
Translates to: WKHSTQLCGSIWSNFQVISGALV*GQSKQT
Trigger: TGTCTGTTTACTCTGACCTCAAACAAGGGCGCCTGA...AATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTATGAAGACCCTTAATTaGTGCCAGGAGGGAACACTG +
Preference number: 4 (lower is better)
Translates to: SSRKTSRKSPRECLSDSAMKTLN*CQEGTL
Trigger: CAGTGTTCCCTCCTGGCAGCAATTAAGGGTCTTCAT...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTACAGGTTTACCTGGGGTaGAAGCACAGCAAACACGTG +
Preference number: 4 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLQVYLG*KHSKHV
Trigger: CACGTGTTTGCTGTGCTTGCACCCCAGGTAAACCTG...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp CCTTTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGACTGTACACAGTTCCTaGAACGTGTGTGATTGCCTG +
Preference number: 4 (lower is better)
Translates to: PLFCLCANVHREDQHPHWTVHSS*NVCDCL
Trigger: CAGGCAATCACACACGTTGCAGGAACTGTGTACAGT...CCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp TGGCTTGTGCTATGTTGGAAACCAAAATCTCGATGCCCTCACCGGGTTCGTGGTATGAAGCCATTGAAATaGACAGCTCTTATTTCCACA +
Preference number: 4 (lower is better)
Translates to: WLVLCWKPKSRCPHRVRGMKPLK*TALIST
Trigger: TGTGGAAATAAGAGCTGTGCATTTCAATGGCTTCAT...ACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTTCCAACATAGCACAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp TGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACAAAGACAGCAGGTGATGAAGAGGTaGCCTTACCTCACAAAACCC +
Preference number: 4 (lower is better)
Translates to: WWPCSKFGQIFKRMGQRQQVMKR*PYLTKP
Trigger: GGGTTTTGTGAGGTAAGGGCACCTCTTCATCACCTG...CTGTCTTTGTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp GAAGGAATTTGGATTTGCCTGGCCAGAGAGTCTGAACTGCAGCAAATTCCCACCGTTTATGTGCCAATGTaGACAGAGAAGATCAACATC +
Preference number: 4 (lower is better)
Translates to: EGIWICLARESELQQIPTVYVPM*TEKINI
Trigger: GATGTTGATCTTCTCTGTGCACATTGGCACATAAAC...GGTGGGAATTTGCTGCAGTTCAGACTCTCTGGCCAGGCAAATCCAAATTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp TGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATGATGCTGGCTTAGTTTATGTGCCAATGTaGACAGAGAAGATCAACATC +
Preference number: 4 (lower is better)
Translates to: WVKRSLNCVLKCGYDAGLVYVPM*TEKINI
Trigger: GATGTTGATCTTCTCTGTGCACATTGGCACATAAAC...TAAGCCAGCATCATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTAAAATTGAGGGTAGACTaGGGCAAGACGACAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLKLRVD*GKTTGR
Trigger: CCTCCCTGTCGTCTTGCCCCAGTCTACCCTCAATTT...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTTTCGTAAGTGGGCAGTaGAGTTCCCTTATGACACTG +
Preference number: 4 (lower is better)
Translates to: SSRKTSRKSPRECLSDSAFVSGQ*SSLMTL
Trigger: CAGTGTCATAAGGGAACTCCACTGCCCACTTACGAA...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp CTATGCAGAATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGCACTCTTGGCCACTCTaGTATGACTTTAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LCRIIFDQAGGLCQAPNKHSWPL*YDFKVG
Trigger: CCCAACTTTAAAGTCATACCAGAGTGGCCAAGAGTG...CTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTATTCTGCATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp TTCCCACCACAGAACGACCACAACCACATGTGCATGGAAGGGCCAGGTGATGAATACTTATTTGGTCATTaGAACTTTGTTCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: FPPQNDHNHMCMEGPGDEYLFGH*NFVHCC
Trigger: GCAGCAATGAACAAAGTTCCAATGACCAAATAAGTA...TTCATCACCTGGCCCTTCCATGCACATGTGGTTGTGGTCGTTCTGTGGTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CCTTTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGGCAGCAGGACTCAAATaGGGTCATGAAGCCATTGAA +
Preference number: 4 (lower is better)
Translates to: PLFCLCANVHREDQHPHWAAGLK*GHEAIE
Trigger: TTCAATGGCTTCATGACCCCATTTGAGTCCTGCTGC...CCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TGGTTTAAAAGTAGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGATCTGGATGGCTGTGTaGGCCAGCCTGTGTTTCATC +
Preference number: 4 (lower is better)
Translates to: WFKSRYLDCLEAFNSALWIWMAV*ASLCFI
Trigger: GATGAAACACAGGCTGGCCCACACAGCCATCCAGAT...CCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACTTTTAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATGATGCTGGCTTATTCAACTCAGCTTTGTaGGAGCATTTGGTCAAACTT +
Preference number: 4 (lower is better)
Translates to: WVKRSLNCVLKCGYDAGLFNSAL*EHLVKL
Trigger: AAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAA...TAAGCCAGCATCATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CACGTGGCAGAAGTGTTCCAACAGATTGGTGAATTACACATAAGGTATCCAGTGGCAGCATGGTGTTTCTaGCGATGTTCTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: HVAEVFQQIGELHIRYPVAAWCF*RCSLLL
Trigger: CAAGAGAAGAGAACATCGCCAGAAACACCATGCTGC...CACTGGATACCTTATGTGTAATTCACCAATCTGTTGGAACACTTCTGCCACGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532234.5
3UTR CAA 72 bp ATTATGAGACTGGTGGATGCAGATGAACTGACTGGCTaGTGCTATGTTGGAAACCAAAATCTCGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: IMRLVDADELTG*CYVGNQNLDAL
Trigger: GAGGGCATCGAGATTTTGGTTTCCAACATAGCACAAGCCAGTCAGTTCATCTGCATCCACCAGTCTCATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp GAGCACACTTTGGGAAATGTGGTTCTACTAGCCTTACTAGGCAAATATGCTTCTCCTTCCCAAAAATGCTaGACCTGCTGTCATAGCCAT +
Preference number: 4 (lower is better)
Translates to: EHTLGNVVLLALLGKYASPSQKC*TCCHSH
Trigger: ATGGCTATGACAGCAGGTTCAGCATTTTTGGGAAGG...AGAAGCATATTTGCCTAGTAAGGCTAGTAGAACCACATTTCCCAAAGTGTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR TCA 90 bp GAGCACACTTTGGGAAATGTGGTTCTACTAGCCTTACTAGGCAAATATGCTTCTTCTTGTGGGGCTTTTTaGGTTCCAGGAGGGCATAAT +
Preference number: 4 (lower is better)
Translates to: EHTLGNVVLLALLGKYASSCGAF*VPGGHN
Trigger: ATTATGCCCTCCTGGAACTCAAAAAGCCCCACAAGA...AGAAGCATATTTGCCTAGTAAGGCTAGTAGAACCACATTTCCCAAAGTGTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR TCA 90 bp GAGCACACTTTGGGAAATGTGGTTCTACTAGCCTTACTAGGCAAATATGCTTCTCATAGGTCTCGTCTTTaGCGTCACAGAAGCGATACA +
Preference number: 4 (lower is better)
Translates to: EHTLGNVVLLALLGKYASHRSRL*RHRSDT
Trigger: TGTATCGCTTCTGTGACGTCAAAGACGAGACCTATG...AGAAGCATATTTGCCTAGTAAGGCTAGTAGAACCACATTTCCCAAAGTGTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR TCA 90 bp TTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCTCAGGAGGTGGTGGTTaGATTGAATTCGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: LFCLCANVHREDQHPHWPSGGGG*IEFETV
Trigger: AACAGTTTCGAATTCAATTCAACCACCACCTCCTGA...GGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp CAAAACTCTTCACACGTGGCAGAAGTGTTCCAACAGATTGGTGAATTACACATAAGTCAAGAGACGCTGTaGACCCGTCCTGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: QNSSHVAEVFQQIGELHISQETL*TRPEGI
Trigger: AATTCCTTCAGGACGGGTTCACAGCGTCTCTTGACT...TATGTGTAATTCACCAATCTGTTGGAACACTTCTGCCACGTGTGAAGAGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532234.5
CDS-3UTR GCA 90 bp GTCAAAGTTCCTAAATGGGAACACTGCCTTATGGAAGCATTAAAGATCAGGCACTTTTCCTGGCGGCTCTaGATCTCCTTGCTATGCATA +
Preference number: 4 (lower is better)
Translates to: VKVPKWEHCLMEALKIRHFSWRL*ISLLCI
Trigger: TATGCATAGCAAGGAGATGCAGAGCCGCCAGGAAAA...GTGCCTGATCTTTAATGCTTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp AGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAACTTTGTTCATTGCTaGAGGTTTGGTGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RLPGSIQLSFVGAFGQTSNFVHC*RFGGLV
Trigger: AACAAGGCCACCAAACCTGCAGCAATGAACAAAGTT...GGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCAGGCAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp GTTCATTGCTGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAAAACCAAAATCTCGATaGCCTCACCGGGTTCGTGGT +
Preference number: 4 (lower is better)
Translates to: VHCCRFGGLVQNSVKSSKKPKSR*PHRVRG
Trigger: ACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTT...TTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAATGAAC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp TTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTGGTGGCCTTGTAAACCAAAATCTCGATaGCCTCACCGGGTTCGTGGT +
Preference number: 4 (lower is better)
Translates to: LLIWSLELCSLLQVWWPCKPKSR*PHRVRG
Trigger: ACCACGAACCCGGTGAGGGCATCGAGATTTTGGTTT...ACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp GATCAGTACATCTGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATTGCAAAGAGGGCTTATaGAATTCTTCAGACCCTATT +
Preference number: 4 (lower is better)
Translates to: DQYIWVKRSLNCVLKCGYCKEGL*NSSDPI
Trigger: AATAGGGTCTGAAGAATTGCATAAGCCCTCTTTGCA...ATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCAGATGTACTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GTCAAAGTTCCTAAATGGGAACACTGCCTTATGGAAGCATTAAAGATCAGGCACCACGTTGAAATCCTGTaGGGAACCATTCATGTCCAC +
Preference number: 4 (lower is better)
Translates to: VKVPKWEHCLMEALKIRHHVEIL*GTIHVH
Trigger: GTGGACATGAATGGTTCCCCACAGGATTTCAACGTG...GTGCCTGATCTTTAATGCTTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp CCTCAACTTGTCCCTTTACAACAGGTCTTCCCAGAGCTTTTAATGTGCAGACAGGTTAAATGGAAGGGTTaGGATAAACACTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PQLVPLQQVFPELLMCRQVKWKG*DKHSWP
Trigger: TGGCCAAGAGTGTTTATCCCAACCCTTCCATTTAAC...CTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAAGGGACAAGTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp GTCAAAGTTCCTAAATGGGAACACTGCCTTATGGAAGCATTAAAGATCAGGCACGCCACAACTGTTTGCTaGGAGGAAATACAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: VKVPKWEHCLMEALKIRHATTVC*EEIQPV
Trigger: AACAGGCTGTATTTCCTCCCAGCAAACAGTTGTGGC...GTGCCTGATCTTTAATGCTTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp GTCAAAGTTCCTAAATGGGAACACTGCCTTATGGAAGCATTAAAGATCAGGCACAACTCAGAATTTTCCTaGCGGCTCTGCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: VKVPKWEHCLMEALKIRHNSEFS*RLCISL
Trigger: CAAGGAGATGCAGAGCCGCCAGGAAAATTCTGAGTT...GTGCCTGATCTTTAATGCTTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp CCTTTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGTCAGGCATGTGGATTTaGTCTGCCAAAACTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PLFCLCANVHREDQHPHWSGMWI*SAKTLH
Trigger: GTGAAGAGTTTTGGCAGACCAAATCCACATGCCTGA...CCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCTCATTGCTGCAGGTTTaGTGGCCTTGTTCAAAATTC +
Preference number: 4 (lower is better)
Translates to: LFCLCANVHREDQHPHWPSLLQV*WPCSKF
Trigger: GAATTTTGAACAAGGCCACCAAACCTGCAGCAATGA...GGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTGGTGGCCTTGTACAACCACATGTGCATaGAAGGGCCAGGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: LLIWSLELCSLLQVWWPCTTTCA*KGQVMK
Trigger: CTTCATCACCTGGCCCTTCCATGCACATGTGGTTGT...ACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CGGTATTCTGCAGATGATTCCAACATGGCTGTTGAAATGTTGAAAATTTTTATGGATCAACATCCCCATTaGCCCATGCGGCGGCATGTG +
Preference number: 4 (lower is better)
Translates to: RYSADDSNMAVEMLKIFMDQHPH*PMRRHV
Trigger: CACATGCCGCCGCATGGGCCAATGGGGATGTTGATC...CATAAAAATTTTCAACATTTCAACAGCCATGTTGGAATCATCTGCAGAATACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GATCAGTACATCTGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATCTTTGTGGGAGCATTTaGTCAAACTTCCAAGTCATT +
Preference number: 4 (lower is better)
Translates to: DQYIWVKRSLNCVLKCGYLCGSI*SNFQVI
Trigger: AATGACTTGGAAGTTTGACCAAATGCTCCCACAAAG...ATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCAGATGTACTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CAA 72 bp CTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATaGCTACAATGCAGGTTTACCTGGGGTGCAAGCACA +
Preference number: 4 (lower is better)
Translates to: LSDSAPSEYPYK*LQCRFTWGAST
Trigger: TGTGCTTGCACCCCAGGTAAACCTGCATTGTAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR TCA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTCACCCACTGGTGCCCTaGAAAAATGCCAATAATTTT +
Preference number: 4 (lower is better)
Translates to: SSRKTSRKSPRECLSDSAHPLVP*KNANNF
Trigger: AAAATTATTGGCATTTTTTCAGGGCACCAGTGGGTG...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR TCA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTAACCCACCACCAAGATaGATCTCAGAAGAAAACACA +
Preference number: 4 (lower is better)
Translates to: SSRKTSRKSPRECLSDSANPPPR*ISEENT
Trigger: TGTGTTTTCTTCTGAGATTCATCTTGGTGGTGGGTT...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR TCA 90 bp ATGTGTCTTTCAGTCAAGAGACGCTGTGAACCCGTCCTGAAGGAATTTGGATTTAGAAAAGTATGTAAGTaGTGGATTATCAGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: MCLSVKRRCEPVLKEFGFRKVCK*WIIRRP
Trigger: AGGGCGCCTGATAATCCATCACTTACATACTTTTCT...AAATCCAAATTCCTTCAGGACGGGTTCACAGCGTCTCTTGACTGAAAGACACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp CCTTTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGGATGTTCTCTTCTCTTaGTTGATGATTCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PLFCLCANVHREDQHPHWDVLFS*LMIPQS
Trigger: GCTCTGAGGAATCATCAATCAAGAGAAGAGAACATC...CCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532234.5
CDS-3UTR GCA 90 bp GTCAAAGTTCCTAAATGGGAACACTGCCTTATGGAAGCATTAAAGATCAGGCACAGCGATACACCAAATTaGCTGGTCGGTCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: VKVPKWEHCLMEALKIRHSDTPN*LVGHCH
Trigger: ATGACAATGACCGACCAGGCAATTTGGTGTATCGCT...GTGCCTGATCTTTAATGCTTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp GTCAAAGTTCCTAAATGGGAACACTGCCTTATGGAAGCATTAAAGATCAGGCACGTTGGGAGGGCCATATaGAAAGACTTCCTACAAAGT +
Preference number: 4 (lower is better)
Translates to: VKVPKWEHCLMEALKIRHVGRAI*KDFLQS
Trigger: ACTTTGTAGGAAGTCTTTGCATATGGCCCTCCCAAC...GTGCCTGATCTTTAATGCTTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTTACAAATTGCTACAATaGAGGTTTACCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SSRKTSRKSPRECLSDSAYKLLQ*RFTWGA
Trigger: TGCACCCCAGGTAAACCTGCATTGTAGCAATTTGTA...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp GTCAAAGTTCCTAAATGGGAACACTGCCTTATGGAAGCATTAAAGATCAGGCACCCAGAGCTTTTAATGTaGAGACAGGCATGTGAACCT +
Preference number: 4 (lower is better)
Translates to: VKVPKWEHCLMEALKIRHPELLM*RQACEP
Trigger: AGGTTCACATGCCTGTCTGCACATTAAAAGCTCTGG...GTGCCTGATCTTTAATGCTTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTCAGGCTCCAAACAAGTaGTTATTCTGTTGTGACATC +
Preference number: 4 (lower is better)
Translates to: SSRKTSRKSPRECLSDSAQAPNK*LFCCDI
Trigger: GATGTCACAACAGAATAACCACTTGTTTGGAGCCTG...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp GGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTGTTATGTCTTTGTTGGTaGGCATCACTTCAGGCATGT +
Preference number: 4 (lower is better)
Translates to: GSIQLSFVGAFGQTSKSLLCLCW*ASLQAC
Trigger: ACATGCCTGAAGTGATGCCCACCAACAAAGACATAA...CAATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GGCTCCCCTCTTTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTTTGCTGCAGGTTTGGTaGCCTTGTTCAAAATTCGGT +
Preference number: 4 (lower is better)
Translates to: GSPLYLFGHWNFVHCCRFLLQVW*PCSKFG
Trigger: ACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAA...AAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CAAGTGTTGTGCAAAGAGGGCTTATGCAATTCTTCAGACCCTATTTATTTTATTTTCCACATTGCAGCCTaGGCCATCCCCGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: QVLCKEGLCNSSDPIYFIFHIAA*AIPAVK
Trigger: TTTCACTGCGGGGATGGCCCAGGCTGCAATGTGGAA...AATAAAATAAATAGGGTCTGAAGAATTGCATAAGCCCTCTTTGCACAACACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GGCTCCCCTCTTTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTTCTGATCAGTACATCTaGGTGAAAAGGAGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: GSPLYLFGHWNFVHCCRFSDQYI*VKRSLN
Trigger: GTTCAGGCTCCTTTTCACCCAGATGTACTGATCAGA...AAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACAAGAGTGTCACTCTGTaGGAACCAATTCTGATCAGT +
Preference number: 4 (lower is better)
Translates to: CRFGGLVQNSVKSSKGWDKSVTL*EPILIS
Trigger: ACTGATCAGAATTGGTTCCCACAGAGTGACACTCTT...GTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CTTTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTGGTGGCCTTGAATTTGGATTTGCCTaGCCAGAGAGTCTGAACTGC +
Preference number: 4 (lower is better)
Translates to: LYLFGHWNFVHCCRFGGLEFGFA*PESLNC
Trigger: GCAGTTCAGACTCTCTGGCCAGGCAAATCCAAATTC...AAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp TGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACAAAGACAGTCAGGAGGTGGTGGTTaGATTGAATTCGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: WWPCSKFGQIFKRMGQRQSGGGG*IEFETV
Trigger: AACAGTTTCGAATTCAATTCAACCACCACCTCCTGA...CTGTCTTTGTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp GGCTCCCCTCTTTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTAGAAAAGTATGTAAGTaGTGGATTATCAGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: GSPLYLFGHWNFVHCCRFRKVCK*WIIRRP
Trigger: AGGGCGCCTGATAATCCATCACTTACATACTTTTCT...AAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTCATAATCATAATCCATaGCGATGTCATTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: SSRKTSRKSPRECLSDSAHNHNP*RCHWHC
Trigger: GCAATGCCAATGACATCGGCATGGATTATGATTATG...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp TACACAGTTCCTGCAACGTGTGTGATTGCCTGTTATTTTTATGAAATCTCCAACACTGTACACAGTTCCTaGAACGTGTGTGATTGCCTG +
Preference number: 4 (lower is better)
Translates to: YTVPATCVIACYFYEISNTVHSS*NVCDCL
Trigger: CAGGCAATCACACACGTTGCAGGAACTGTGTACAGT...GTTGGAGATTTCATAAAAATAACAGGCAATCACACACGTTGCAGGAACTGTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp ATGTGTCTTTCAGTCAAGAGACGCTGTGAACCCGTCCTGAAGGAATTTGGATTTAGTAGATACCTAGATTaGCTGGAAGCATTCAACTCA +
Preference number: 4 (lower is better)
Translates to: MCLSVKRRCEPVLKEFGFSRYLD*LEAFNS
Trigger: TGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACT...AAATCCAAATTCCTTCAGGACGGGTTCACAGCGTCTCTTGACTGAAAGACACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp TGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACTGCAAAGAGGGCTTATaGAATTCTTCAGACCCTATT +
Preference number: 4 (lower is better)
Translates to: CRFGGLVQNSVKSSKGWDCKEGL*NSSDPI
Trigger: AATAGGGTCTGAAGAATTGCATAAGCCCTCTTTGCA...GTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp GGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTGATAGAATTTTTGTACTaGAGCATGGTGTTTCTGGCG +
Preference number: 4 (lower is better)
Translates to: GSIQLSFVGAFGQTSKSLIEFLY*SMVFLA
Trigger: CGCCAGAAACACCATGCTGCAGTACAAAAATTCTAT...CAATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532234.5
CDS-3UTR CCA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTAAGATACTTCTAATTTaGCTTCGGCTCCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SSRKTSRKSPRECLSDSAKILLI*LRLQSL
Trigger: CAGACTTTGGAGCCGAAGCCAAATTAGAAGTATCTT...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTAAAGACAGATATTGCTTaGCCTCTTCGTAAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLKTDIA*PLRKWA
Trigger: TGCCCACTTACGAAGAGGCCAAGCAATATCTGTCTT...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp CCTCAACTTGTCCCTTTACAACAGGTCTTCCCAGAGCTTTTAATGTGCAGACAGAGCAGCTTGGGATACTaGTTTACTATAAGGTATAGT +
Preference number: 4 (lower is better)
Translates to: PQLVPLQQVFPELLMCRQSSLGY*FTIRYS
Trigger: ACTATACCTTATAGTAAACCAGTATCCCAAGCTGCT...CTGTCTGCACATTAAAAGCTCTGGGAAGACCTGTTGTAAAGGGACAAGTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp TGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTATCACTTCAGGCATGTaGATTTGGTCTGCCAAAACT +
Preference number: 4 (lower is better)
Translates to: WKHSTQLCGSIWSNFQVIITSGM*IWSAKT
Trigger: AGTTTTGGCAGACCAAATCCACATGCCTGAAGTGAT...AATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TGTCACTCTGTGGGAACCAATTCTGATCAGTACATCTGGGTGAAAAGGAGCCTGAAATCTTCAAAAGGATaGGACAAAGACAGACAAGTT +
Preference number: 4 (lower is better)
Translates to: CHSVGTNSDQYIWVKRSLKSSKG*DKDRQV
Trigger: AACTTGTCTGTCTTTGTCCCATCCTTTTGAAGATTT...CAGGCTCCTTTTCACCCAGATGTACTGATCAGAATTGGTTCCCACAGAGTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp ATTGCTGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATATTCTGACACTCACTTaGTTTTTGGCAGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: IAAGLVALFKIRSNLQKDILTLT*FLAAGL
Trigger: GAGTCCTGCTGCCAAAAACCAAGTGAGTGTCAGAAT...ATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACAAAGACAGTTTTGTACTGCAGCATaGTGTTTCTGGCGATGTTCT +
Preference number: 4 (lower is better)
Translates to: WWPCSKFGQIFKRMGQRQFCTAA*CFWRCS
Trigger: AGAACATCGCCAGAAACACCATGCTGCAGTACAAAA...CTGTCTTTGTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532234.5
CDS-3UTR TCA 90 bp TGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACAAAGACAGTTCCTGCAACGTGTGTaGTTGCCTGTTATTTTTATG +
Preference number: 4 (lower is better)
Translates to: WWPCSKFGQIFKRMGQRQFLQRV*LPVIFM
Trigger: CATAAAAATAACAGGCAATCACACACGTTGCAGGAA...CTGTCTTTGTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp CGGTATTCTGCAGATGATTCCAACATGGCTGTTGAAATGTTGAAAATTTTTATGGCTGTGAACCCGTCCTaGAGGAATTTGGATTTGCCT +
Preference number: 4 (lower is better)
Translates to: RYSADDSNMAVEMLKIFMAVNPS*RNLDLP
Trigger: AGGCAAATCCAAATTCCTTCAGGACGGGTTCACAGC...CATAAAAATTTTCAACATTTCAACAGCCATGTTGGAATCATCTGCAGAATACCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTATAAATTTTCTCTTGTaGGGCTTTTTGAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSRKTSRKSPRECLSDSAINFLL*GFLSSR
Trigger: CCTGGAACTCAAAAAGCCCCACAAGAGAAAATTTAT...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTAATACACCAAATTGCCTaGTCGGTCATTGTCATAACC +
Preference number: 4 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLIHQIA*SVIVIT
Trigger: GGTTATGACAATGACCGACCAGGCAATTTGGTGTAT...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp GTCAAAGTTCCTAAATGGGAACACTGCCTTATGGAAGCATTAAAGATCAGGCACGTCAAAGTTCCTAAATaGGAACACTGCCTTATGGAA +
Preference number: 4 (lower is better)
Translates to: VKVPKWEHCLMEALKIRHVKVPK*EHCLME
Trigger: TTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC...GTGCCTGATCTTTAATGCTTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp GTGGATGCAGATGAACTGACTGGCTTGTGCTATGTTGGAAACCAAAATCTCGATTATGAAATCTCCAACTaGGCACTTTTTCGGTATTCT +
Preference number: 4 (lower is better)
Translates to: VDADELTGLCYVGNQNLDYEISN*ALFRYS
Trigger: AGAATACCGAAAAAGTGCCCAGTTGGAGATTTCATA...ATCGAGATTTTGGTTTCCAACATAGCACAAGCCAGTCAGTTCATCTGCATCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CGGTATTCTGCAGATGATTCCAACATGGCTGTTGAAATGTTGAAAATTTTTATGGTCCTGGAACCTAGTTaGTATTCAGGAGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RYSADDSNMAVEMLKIFMVLEPS*YSGGGG
Trigger: ACCACCACCTCCTGAATACCAACTAGGTTCCAGGAC...CATAAAAATTTTCAACATTTCAACAGCCATGTTGGAATCATCTGCAGAATACCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp GTGGATGCAGATGAACTGACTGGCTTGTGCTATGTTGGAAACCAAAATCTCGATAGACTCCCGATAGGTTaGTTTAAAAGTAGATACCTA +
Preference number: 4 (lower is better)
Translates to: VDADELTGLCYVGNQNLDRLPIG*FKSRYL
Trigger: TAGGTATCTACTTTTAAACCAACCTATCGGGAGTCT...ATCGAGATTTTGGTTTCCAACATAGCACAAGCCAGTCAGTTCATCTGCATCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTCTCCTAGGGCTAAACTaGCTCAATTTTAAGAATGGA +
Preference number: 4 (lower is better)
Translates to: WKHSTQLCGSIWSNFQVILLGLN*LNFKNG
Trigger: TCCATTCTTAAAATTGAGCCAGTTTAGCCCTAGGAG...AATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532234.5
CDS-3UTR TCA 90 bp CTTTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTGGTGGCCTTTGCCTGTTATTTTTATaGAATCTCCAACTGGGCACT +
Preference number: 4 (lower is better)
Translates to: LYLFGHWNFVHCCRFGGLCLLFL*NLQLGT
Trigger: AGTGCCCAGTTGGAGATTTCATAAAAATAACAGGCA...AAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACAAAGACACTTTGTGGGAGCATTTaGTCAAACTTCCAAGTCATT +
Preference number: 4 (lower is better)
Translates to: LVALFKIRSNLQKDGTKTLCGSI*SNFQVI
Trigger: AATGACTTGGAAGTTTGACCAAATGCTCCCACAAAG...TGTCTTTGTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp TGGTTTAAAAGTAGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGTTCAACTCAGCTTTGTaGGAGCATTTGGTCAAACTT +
Preference number: 4 (lower is better)
Translates to: WFKSRYLDCLEAFNSALWFNSAL*EHLVKL
Trigger: AAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAA...CCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACTTTTAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR TCA 90 bp AGAAAGCACTGTGGTTGTACGTTTCTTGAGTGCCTTATCAGAATTATCCTTCCATGGTTGTACGTTTCTTaGGTGCCTTATCAGAATTAT +
Preference number: 4 (lower is better)
Translates to: RKHCGCTFLECLIRIILPWLYVS*VPYQNY
Trigger: ATAATTCTGATAAGGCACTCAAGAAACGTACAACCA...TGGAAGGATAATTCTGATAAGGCACTCAAGAAACGTACAACCACAGTGCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR GCA 90 bp GAGCACACTTTGGGAAATGTGGTTCTACTAGCCTTACTAGGCAAATATGCTTCTTGTACGTTTCTTGAGTaGCTTATCAGAATTATCCTT +
Preference number: 4 (lower is better)
Translates to: EHTLGNVVLLALLGKYASCTFLE*LIRIIL
Trigger: AAGGATAATTCTGATAAGGCACTCAAGAAACGTACA...AGAAGCATATTTGCCTAGTAAGGCTAGTAGAACCACATTTCCCAAAGTGTGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp AGAAAGCACTGTGGTTGTACGTTTCTTGAGTGCCTTATCAGAATTATCCTTCCACAAAGAAAATTGTGCTaGAACTCAGAATTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RKHCGCTFLECLIRIILPQRKLC*NSEFSW
Trigger: CCAGGAAAATTCTGAGTTCCAGCACAATTTTCTTTG...TGGAAGGATAATTCTGATAAGGCACTCAAGAAACGTACAACCACAGTGCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CCA 90 bp CGGTATTCTGCAGATGATTCCAACATGGCTGTTGAAATGTTGAAAATTTTTATGTCAGGCATGTGGATTTaGTCTGCCAAAACTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RYSADDSNMAVEMLKIFMSGMWI*SAKTLH
Trigger: GTGAAGAGTTTTGGCAGACCAAATCCACATGCCTGA...CATAAAAATTTTCAACATTTCAACAGCCATGTTGGAATCATCTGCAGAATACCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
3UTR CAA 72 bp TATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTaGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAA +
Preference number: 4 (lower is better)
Translates to: YLVIGTLFIAAG*VALFKIRSNLQ
Trigger: TTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp CGGTATTCTGCAGATGATTCCAACATGGCTGTTGAAATGTTGAAAATTTTTATGAACTTTGTTCATTGCTaGAGGTTTGGTGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RYSADDSNMAVEMLKIFMNFVHC*RFGGLV
Trigger: AACAAGGCCACCAAACCTGCAGCAATGAACAAAGTT...CATAAAAATTTTCAACATTTCAACAGCCATGTTGGAATCATCTGCAGAATACCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CAAGTGTTGTGCAAAGAGGGCTTATGCAATTCTTCAGACCCTATTTATTTTATTACTGATGGTCAAGATTaGGGTGTTCTCAGTACTGTA +
Preference number: 4 (lower is better)
Translates to: QVLCKEGLCNSSDPIYFITDGQD*GVLSTV
Trigger: TACAGTACTGAGAACACCCCAATCTTGACCATCAGT...AATAAAATAAATAGGGTCTGAAGAATTGCATAAGCCCTCTTTGCACAACACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CAAGTGTTGTGCAAAGAGGGCTTATGCAATTCTTCAGACCCTATTTATTTTATTTCATTGCTGCAGGTTTaGTGGCCTTGTTCAAAATTC +
Preference number: 4 (lower is better)
Translates to: QVLCKEGLCNSSDPIYFISLLQV*WPCSKF
Trigger: GAATTTTGAACAAGGCCACCAAACCTGCAGCAATGA...AATAAAATAAATAGGGTCTGAAGAATTGCATAAGCCCTCTTTGCACAACACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CTTTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTGGTGGCCTTTACTTATTTGGTCATTaGAACTTTGTTCATTGCTGC +
Preference number: 4 (lower is better)
Translates to: LYLFGHWNFVHCCRFGGLYLFGH*NFVHCC
Trigger: GCAGCAATGAACAAAGTTCCAATGACCAAATAAGTA...AAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR GCA 90 bp CAAGTGTTGTGCAAAGAGGGCTTATGCAATTCTTCAGACCCTATTTATTTTATTGAACTGACTGGCTTGTaGTATGTTGGAAACCAAAAT +
Preference number: 4 (lower is better)
Translates to: QVLCKEGLCNSSDPIYFIELTGL*YVGNQN
Trigger: ATTTTGGTTTCCAACATAGCACAAGCCAGTCAGTTC...AATAAAATAAATAGGGTCTGAAGAATTGCATAAGCCCTCTTTGCACAACACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CCA 90 bp CGGTATTCTGCAGATGATTCCAACATGGCTGTTGAAATGTTGAAAATTTTTATGAGACTCCCGATAGGTTaGTTTAAAAGTAGATACCTA +
Preference number: 4 (lower is better)
Translates to: RYSADDSNMAVEMLKIFMRLPIG*FKSRYL
Trigger: TAGGTATCTACTTTTAAACCAACCTATCGGGAGTCT...CATAAAAATTTTCAACATTTCAACAGCCATGTTGGAATCATCTGCAGAATACCG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS GCA 90 bp CCGCTCAGACAGGTGTGGGCGCCGGGAGAGAGCGCGCGGCTCCCATaGCTGCCCCGCCGCACAGCCGAGTGCGAGCAAGCTGGCGAGCAG +
Preference number: 5 (lower is better)
Translates to: PLRQVWAPGESARLP*LPRRTAECEQAGEQ
Trigger: CTGCTCGCCAGCTTGCTCGCACTCGGCTGTGCGGCGGGGCAGGCATGGGAGCCGCGCGCTCTCTCCCGGCGCCCACACCTGTCTGAGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS TCA 90 bp TCCTTGGCAGGAGTAGTTTGGTCAGCGTGCCCGCCAGCCTGCTTTTaGAAGGACGACCTCCAGCTGTCTCCAGAGGTAGCCACCCACCCC +
Preference number: 5 (lower is better)
Translates to: SLAGVVWSACPPACF*KDDLQLSPEVATHP
Trigger: GGGGTGGGTGGCTACCTCTGGAGACAGCTGGAGGTCGTCCTTTCAAAAGCAGGCTGGCGGGCACGCTGACCAAACTACTCCTGCCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 90 bp CTGTCTCTTCCACATCCTCACATAGACCCCAGACCCGCTGGCCCCTaGCTGGGCATCGCATTGCTGGTAGAGCAAGTCATAGGTCTCGTC +
Preference number: 5 (lower is better)
Translates to: LSLPHPHIDPRPAGP*LGIALLVEQVIGLV
Trigger: GACGAGACCTATGACTTGCTCTACCAGCAATGCGATGCCCAGCCAGGGGCCAGCGGGTCTGGGGTCTATGTGAGGATGTGGAAGAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS CCA 90 bp TCTGCTGCTGTCTCTTCCACATCCTCACATAGACCCCAGACCCGCTaGCCCCTGGCTGGGCATCGCATTGCTGGTAGAGCAAGTCATAGG +
Preference number: 5 (lower is better)
Translates to: SAAVSSTSSHRPQTR*PLAGHRIAGRASHR
Trigger: CCTATGACTTGCTCTACCAGCAATGCGATGCCCAGCCAGGGGCCAGCGGGTCTGGGGTCTATGTGAGGATGTGGAAGAGACAGCAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS CCA 90 bp TTGGCTTCGGCTCCAAAGTCTGGCTTGGCTAAATTGAGGGTAGACTaGGGCAAGACGACAGGGAGGCGGTATGCAGGCCAAGTGGGTTTC +
Preference number: 5 (lower is better)
Translates to: LASAPKSGLAKLRVD*GKTTGRRYAGQVGF
Trigger: GAAACCCACTTGGCCTGCATACCGCCTCCCTGTCGTCTTGCCCCAGTCTACCCTCAATTTAGCCAAGCCAGACTTTGGAGCCGAAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280258.6
ENST00000527521.1
CDS TCA 90 bp TTGATCCAACCCTTGGGCACATGGGTGCGTTTCACCCGGATCCACTaGAATTTCATCTGCTCGGGCATGGCTGAAGTGGAGTCGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LIQPLGTWVRFTRIH*NFICSGMAEVESLA
Trigger: GGCCAACGACTCCACTTCAGCCATGCCCGAGCAGATGAAATTTCAGTGGATCCGGGTGAAACGCACCCATGTGCCCAAGGGTTGGATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS CCA 90 bp AAATTAGGGGAGAGTCAGAAGTCCAGTCCAAAGGAACCACAGCAATaGCTCCTTGGCAGGAGTAGTTTGGTCAGCGTGCCCGCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: KLGESQKSSPKEPQQ*LLGRSSLVSVPASL
Trigger: CAGGCTGGCGGGCACGCTGACCAAACTACTCCTGCCAAGGAGCCATTGCTGTGGTTCCTTTGGACTGGACTTCTGACTCTCCCCTAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS-3UTR CAA 90 bp ATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTAGATCAACATCCCCATaGGCCCATGCGGCGGCATGT +
Preference number: 5 (lower is better)
Translates to: MCTEKINIPIGPCGGMCLRSTSP*AHAAAC
Trigger: ACATGCCGCCGCATGGGCCAATGGGGATGTTGATCT...AAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS TCA 90 bp GCGTTTCACCCGGATCCACTGAAATTTCATCTGCTCGGGCATGGCTaGAGTGGAGTCGTTGGCCCCTCGACCACCATCTTTAAACTTGGG +
Preference number: 5 (lower is better)
Translates to: AFHPDPLKFHLLGHG*SGVVGPSTTIFKLG
Trigger: CCCAAGTTTAAAGATGGTGGTCGAGGGGCCAACGACTCCACTTCAGCCATGCCCGAGCAGATGAAATTTCAGTGGATCCGGGTGAAACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS TCA 90 bp GGAGGGCATAATCATAATCCATGCCGATGTCATTGGCATTGCCCTTaGTCCAACCCTTGGGCACATGGGTGCGTTTCACCCGGATCCACT +
Preference number: 5 (lower is better)
Translates to: GGHNHNPCRCHWHCP*SNPWAHGCVSPGST
Trigger: AGTGGATCCGGGTGAAACGCACCCATGTGCCCAAGGGTTGGATCAAGGGCAATGCCAATGACATCGGCATGGATTATGATTATGCCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS CCA 90 bp TTCAGTGGGAGATGCCATTGCAAACTGAATTGTGGCTGGCAGGGCTaGATTCCTGGGTTTGCAACATGGGCAGTCATTCAGAGCCCTGTG +
Preference number: 5 (lower is better)
Translates to: FSGRCHCKLNCGWQG*IPGFATWAVIQSPV
Trigger: CACAGGGCTCTGAATGACTGCCCATGTTGCAAACCCAGGAATCCAGCCCTGCCAGCCACAATTCAGTTTGCAATGGCATCTCCCACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS-3UTR CAA 90 bp TCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGAGACGCTGTGAACTTGAATTCGAAACTGTaGAGCCCTCTCGCTTCACAG +
Preference number: 5 (lower is better)
Translates to: SPLAHAAACVFQSRDAVNLNSKL*SPLASQ
Trigger: CTGTGAAGCGAGAGGGCTCAACAGTTTCGAATTCAA...GTTCACAGCGTCTCTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS TCA 90 bp GAATTCGAAACTGTTGAGCCCTCTCGCTTCACAGTTGTGGGGGCATaGGGACTAGGCCAGGGTTGGCACACAGGTCTCATTCTACTCATT +
Preference number: 5 (lower is better)
Translates to: EFETVEPSRFTVVGA*GLGQGWHTGLILLI
Trigger: AATGAGTAGAATGAGACCTGTGTGCCAACCCTGGCCTAGTCCTCATGCCCCCACAACTGTGAAGCGAGAGGGCTCAACAGTTTCGAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000531475.5
ENST00000532234.5
ENST00000533880.1
ENST00000533902.2
CDS CCA 90 bp AAACTGAATTGTGGCTGGCAGGGCTGGATTCCTGGGTTTGCAACATaGGCAGTCATTCAGAGCCCTGTGCTTAGACAGGCCTTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: KLNCGWQGWIPGFAT*AVIQSPVLRQALCF
Trigger: AAAGCACAAGGCCTGTCTAAGCACAGGGCTCTGAATGACTGCCCATGTTGCAAACCCAGGAATCCAGCCCTGCCAGCCACAATTCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS TCA 90 bp GCTGGGCATCGCATTGCTGGTAGAGCAAGTCATAGGTCTCGTCTTTaGCGTCACAGAAGCGATACACCAAATTGCCTGGTCGGTCATTGT +
Preference number: 5 (lower is better)
Translates to: AGHRIAGRASHRSRL*RHRSDTPNCLVGHC
Trigger: ACAATGACCGACCAGGCAATTTGGTGTATCGCTTCTGTGACGTCAAAGACGAGACCTATGACTTGCTCTACCAGCAATGCGATGCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS GCA 90 bp CCTCCTATCTCATCCTGTGACTTAGAATGCCTAACCGTCTGGGAATaGAGCCCAGTAGGTCTCAGCCTTATTTTACCCAGCCCCTACTCA +
Preference number: 5 (lower is better)
Translates to: PPISSCDLECLTVWE*SPVGLSLILPSPYS
Trigger: TGAGTAGGGGCTGGGTAAAATAAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAGGCATTCTAAGTCACAGGATGAGATAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 90 bp TGCGGCTGCCATTGGCATAGAGCGTTTCATAAGACAGATATTGCTTaGCCTCTTCGTAAGTGGGCAGTGGAGTTCCCTTATGACACTGGG +
Preference number: 5 (lower is better)
Translates to: CGCHWHRAFHKTDIA*PLRKWAVEFPYDTG
Trigger: CCCAGTGTCATAAGGGAACTCCACTGCCCACTTACGAAGAGGCCAAGCAATATCTGTCTTATGAAACGCTCTATGCCAATGGCAGCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280258.6
ENST00000527521.1
CDS CCA 90 bp GCCTGGTCGGTCATTGTCATAACCAGAGAAGTGAATTCTGCCCCCTaGCAGCTGCTTAGCAGGAGGGCTCACCCCAATCTTCATAAATTT +
Preference number: 5 (lower is better)
Translates to: AWSVIVITREVNSAP*QLLSRRAHPNLHKF
Trigger: AAATTTATGAAGATTGGGGTGAGCCCTCCTGCTAAGCAGCTGCCAGGGGGCAGAATTCACTTCTCTGGTTATGACAATGACCGACCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS CCA 90 bp TGTATTGCTTCCCTGAGATTCACACTTCAGGGAAAGACCACTTGGTaGGCTGAGCCAAAGTCAGTTACTGACCCTCAGATTGTGCCAGGG +
Preference number: 5 (lower is better)
Translates to: CIASLRFTLQGKTTW*AEPKSVTDPQIVPG
Trigger: CCCTGGCACAATCTGAGGGTCAGTAACTGACTTTGGCTCAGCCCACCAAGTGGTCTTTCCCTGAAGTGTGAATCTCAGGGAAGCAATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 90 bp GGTCTGGAGTCCTCTCTGTTTGTTTCAGAGGGATTAGTTATTGCCTaGGGGCCCTGTGTGGACCCATCCCTTGGAGCTGTTAAACACAAT +
Preference number: 5 (lower is better)
Translates to: GLESSLFVSEGLVIA*GPCVDPSLGAVKHN
Trigger: ATTGTGTTTAACAGCTCCAAGGGATGGGTCCACACAGGGCCCCCAGGCAATAACTAATCCCTCTGAAACAAACAGAGAGGACTCCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 90 bp CTTTTCTGCTTCAGTGGGAGATGCCATTGCAAACTGAATTGTGGCTaGCAGGGCTGGATTCCTGGGTTTGCAACATGGGCAGTCATTCAG +
Preference number: 5 (lower is better)
Translates to: LFCFSGRCHCKLNCG*QGWIPGFATWAVIQ
Trigger: CTGAATGACTGCCCATGTTGCAAACCCAGGAATCCAGCCCTGCCAGCCACAATTCAGTTTGCAATGGCATCTCCCACTGAAGCAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS TCA 90 bp CTCCCATGCATGAGCTTATCTGCTGTGATGCTGATGTCCTGGATGTaGTTGATTACCCACCACTATCTTGGGGACCTGGGAATGACCTTC +
Preference number: 5 (lower is better)
Translates to: LPCMSLSAVMLMSWM*LITHHYLGDLGMTF
Trigger: GAAGGTCATTCCCAGGTCCCCAAGATAGTGGTGGGTAATCAATCACATCCAGGACATCAGCATCACAGCAGATAAGCTCATGCATGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS GCA 90 bp GAAGAGAGTCTTCAAGGAGGTCAGAGAATCCACAGCTCTGCTTTGTaGAGGGATGTCTCCTCTTCACCAAAGCATTTAGCATCCACTGGG +
Preference number: 5 (lower is better)
Translates to: EESLQGGQRIHSSAL*RDVSSSPKHLASTG
Trigger: CCCAGTGGATGCTAAATGCTTTGGTGAAGAGGAGACATCCCTGCACAAAGCAGAGCTGTGGATTCTCTGACCTCCTTGAAGACTCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531475.5
ENST00000532572.1
ENST00000533880.1
CDS-3UTR CAA 90 bp CTATGCAGAATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGACTGTAAGGGCTCACTaGCCCAACAGCACAGAGCAG +
Preference number: 5 (lower is better)
Translates to: LCRIIFDQAGGLCQAPNKTVRAH*PNSTEQ
Trigger: CTGCTCTGTGCTGTTGGGCAAGTGAGCCCTTACAGT...CTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTATTCTGCATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp GTCAAAGTTCCTAAATGGGAACACTGCCTTATGGAAGCATTAAAGATCAGGCACGCTGAAGTGGAGTCGTaGGCCCCTCGACCACCATCT +
Preference number: 5 (lower is better)
Translates to: VKVPKWEHCLMEALKIRHAEVES*APRPPS
Trigger: AGATGGTGGTCGAGGGGCCAACGACTCCACTTCAGC...GTGCCTGATCTTTAATGCTTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp CAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGTGGTTATTCTGTTGTGACATCAAGCGATACACCAAATaGCCTGGTCGGTCATTGTCA +
Preference number: 5 (lower is better)
Translates to: QAGGLCQAPNKWLFCCDIKRYTK*PGRSLS
Trigger: TGACAATGACCGACCAGGCAATTTGGTGTATCGCTT...GATGTCACAACAGAATAACCACTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp CAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGTGGTTATTCTGTTGTGACATCCGGCTCTGCATCTCCTaGCTATGCATAGTATTTCTC +
Preference number: 5 (lower is better)
Translates to: QAGGLCQAPNKWLFCCDIRLCIS*LCIVFL
Trigger: GAGAAATACTATGCATAGCAAGGAGATGCAGAGCCG...GATGTCACAACAGAATAACCACTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp ATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATTCATTGCTGCAGGTTaGGTGGCCTTGTTCAAAATT +
Preference number: 5 (lower is better)
Translates to: MCQCAQRRSTSPLAHAAAFIAAG*VALFKI
Trigger: AATTTTGAACAAGGCCACCAAACCTGCAGCAATGAA...TGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp GAGAAGATCAACATCCCCATTGGCCCATGCGGCGGCATGTGTCTTTCAGTCAAGTATTCTGACACTCACTaGGTTTTTGGCAGCAGGACT +
Preference number: 5 (lower is better)
Translates to: EKINIPIGPCGGMCLSVKYSDTH*VFGSRT
Trigger: AGTCCTGCTGCCAAAAACCAAGTGAGTGTCAGAATA...CTTGACTGAAAGACACATGCCGCCGCATGGGCCAATGGGGATGTTGATCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp TTGATTATGAGACTGGTGGATGCAGATGAACTGACTGGCTTGTGCTATGTTGGAAGATCAACATCCCCATaGGCCCATGCGGCGGCATGT +
Preference number: 5 (lower is better)
Translates to: LIMRLVDADELTGLCYVGRSTSP*AHAAAC
Trigger: ACATGCCGCCGCATGGGCCAATGGGGATGTTGATCT...TCCAACATAGCACAAGCCAGTCAGTTCATCTGCATCCACCAGTCTCATAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp CAGCCAAGGAGTTCACTGATATCTGGATGGCTGTGTGGGCCAGCCTGTGTTTCAGCTTTGTGGGAGCATTaGGTCAAACTTCCAAGTCAT +
Preference number: 5 (lower is better)
Translates to: QPRSSLISGWLCGPACVSALWEH*VKLPSH
Trigger: ATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGC...TGAAACACAGGCTGGCCCACACAGCCATCCAGATATCAGTGAACTCCTTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS GCA 90 bp CAGCTCAGAAGAGAGTCTTCAAGGAGGTCAGAGAATCCACAGCTCTaGTTTGTGCAGGGATGTCTCCTCTTCACCAAAGCATTTAGCATC +
Preference number: 5 (lower is better)
Translates to: QLRRESSRRSENPQL*FVQGCLLFTKAFSI
Trigger: GATGCTAAATGCTTTGGTGAAGAGGAGACATCCCTGCACAAAGCAGAGCTGTGGATTCTCTGACCTCCTTGAAGACTCTCTTCTGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531475.5
ENST00000532572.1
ENST00000533880.1
CDS GCA 90 bp GCTGGATTCCTGGGTTTGCAACATGGGCAGTCATTCAGAGCCCTGTaGTTAGACAGGCCTTGTGCTTTGTTTAATGCTTTGCTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: AGFLGLQHGQSFRAL*LDRPCALFNALLLL
Trigger: TAGCAACAGCAAAGCATTAAACAAAGCACAAGGCCTGTCTAAGCACAGGGCTCTGAATGACTGCCCATGTTGCAAACCCAGGAATCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS GCA 90 bp CTGCAAATTGCTATGAAGCTTTTCTGCTTCAGTGGGAGATGCCATTaGAAACTGAATTGTGGCTGGCAGGGCTGGATTCCTGGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: LQIAMKLFCFSGRCH*KLNCGWQGWIPGFA
Trigger: TGCAAACCCAGGAATCCAGCCCTGCCAGCCACAATTCAGTTTGCAATGGCATCTCCCACTGAAGCAGAAAAGCTTCATAGCAATTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS GCA 90 bp TTCTGCGAGTGTGATCTGGGCCTGCAAATTGCTATGAAGCTTTTCTaGTTCAGTGGGAGATGCCATTGCAAACTGAATTGTGGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: FCECDLGLQIAMKLF*FSGRCHCKLNCGWQ
Trigger: CTGCCAGCCACAATTCAGTTTGCAATGGCATCTCCCACTGAAGCAGAAAAGCTTCATAGCAATTTGCAGGCCCAGATCACACTCGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 90 bp GAGTGTAGCAGTGAGGACAACCAGAGGTCACTCTCATGGCCATCTTaGTTTTGGTGGGCTTCAGCTGGCTTCTTTACTGCAACCTATTTT +
Preference number: 5 (lower is better)
Translates to: ECSSEDNQRSLSWPS*FWWASAGFFTATYF
Trigger: AAAATAGGTTGCAGTAAAGAAGCCAGCTGAAGCCCACCAAAACCAAGATGGCCATGAGAGTGACCTCTGGTTGTCCTCACTGCTACACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS-3UTR CAA 90 bp GGCTATGATGCTGGCTTATACAGCCGCTCAGCCAAGGAGTTCACTGATATCTGGCTGGCTTGTGCTATGTaGGAAACCAAAATCTCGATG +
Preference number: 5 (lower is better)
Translates to: GYDAGLYSRSAKEFTDIWLACAM*ETKISM
Trigger: CATCGAGATTTTGGTTTCCAACATAGCACAAGCCAG...CCAGATATCAGTGAACTCCTTGGCTGAGCGGCTGTATAAGCCAGCATCATAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp AAGAGACGCTGTGAACCCGTCCTGAAGGAATTTGGATTTGCCTGGCCAGAGAGTGATGAACTGACTGGCTaGTGCTATGTTGGAAACCAA +
Preference number: 5 (lower is better)
Translates to: KRRCEPVLKEFGFAWPESDELTG*CYVGNQ
Trigger: TTGGTTTCCAACATAGCACAAGCCAGTCAGTTCATC...ACTCTCTGGCCAGGCAAATCCAAATTCCTTCAGGACGGGTTCACAGCGTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp TGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATGATGCTGGCTTAGATTATCAGGCGCCCTaGTTTGAGGTCAGAGTAAAC +
Preference number: 5 (lower is better)
Translates to: WVKRSLNCVLKCGYDAGLDYQAP*FEVRVN
Trigger: GTTTACTCTGACCTCAAACAAGGGCGCCTGATAATC...TAAGCCAGCATCATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS TCA 90 bp GGCAGGGGTCAACTCCAATCCCAGTTCCGTAACTTTCTAGCGATGTaGGCTTGGGTAAGTTACTTAACCTCTCTGGGCTTCAGTGTTATT +
Preference number: 5 (lower is better)
Translates to: GRGQLQSQFRNFLAM*AWVSYLTSLGFSVI
Trigger: AATAACACTGAAGCCCAGAGAGGTTAAGTAACTTACCCAAGCTCACATCGCTAGAAAGTTACGGAACTGGGATTGGAGTTGACCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 90 bp CATAGAGCGTTTCATAAGACAGATATTGCTTGGCCTCTTCGTAAGTaGGCAGTGGAGTTCCCTTATGACACTGGGGTCCACATGAAGAAG +
Preference number: 5 (lower is better)
Translates to: HRAFHKTDIAWPLRK*AVEFPYDTGVHMKK
Trigger: CTTCTTCATGTGGACCCCAGTGTCATAAGGGAACTCCACTGCCCACTTACGAAGAGGCCAAGCAATATCTGTCTTATGAAACGCTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280258.6
ENST00000527521.1
CDS CCA 90 bp TTTTGTATTGCTTCCCTGAGATTCACACTTCAGGGAAAGACCACTTaGTGGGCTGAGCCAAAGTCAGTTACTGACCCTCAGATTGTGCCA +
Preference number: 5 (lower is better)
Translates to: FCIASLRFTLQGKTT*WAEPKSVTDPQIVP
Trigger: TGGCACAATCTGAGGGTCAGTAACTGACTTTGGCTCAGCCCACCAAGTGGTCTTTCCCTGAAGTGTGAATCTCAGGGAAGCAATACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 90 bp TGTGATGCTGATGTCCTGGATGTGATTGATTACCCACCACTATCTTaGGGACCTGGGAATGACCTTCTGGATGCATTTGTAAGGAACCAG +
Preference number: 5 (lower is better)
Translates to: CDADVLDVIDYPPLS*GPGNDLLDAFVRNQ
Trigger: CTGGTTCCTTACAAATGCATCCAGAAGGTCATTCCCAGGTCCCCAAGATAGTGGTGGGTAATCAATCACATCCAGGACATCAGCATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 90 bp AGCCCAGTAGGTCTCAGCCTTATTTTACCCAGCCCCTACTCAAGATaGAGTTGCTCTGGTTCAGACGCCTCTGACAATTCTATAATTAGG +
Preference number: 5 (lower is better)
Translates to: SPVGLSLILPSPYSR*SCSGSDASDNSIIR
Trigger: CCTAATTATAGAATTGTCAGAGGCGTCTGAACCAGAGCAACTCCATCTTGAGTAGGGGCTGGGTAAAATAAGGCTGAGACCTACTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS-3UTR CAA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTACCCTTGATCCAACCCTaGGGCACATGGGTGCGTTTC +
Preference number: 5 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLPLIQP*GTWVRF
Trigger: GAAACGCACCCATGTGCCCAAGGGTTGGATCAAGGG...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp AGCTCAAGAAAGACAAGCAGAAAATCCCCCAGAGAATGTCTAAGTGACAGTGCTTCATTGGCATTGCCCTaGATCCAACCCTTGGGCACA +
Preference number: 5 (lower is better)
Translates to: SSRKTSRKSPRECLSDSASLALP*IQPLGT
Trigger: TGTGCCCAAGGGTTGGATCAAGGGCAATGCCAATGA...AGCACTGTCACTTAGACATTCTCTGGGGGATTTTCTGCTTGTCTTTCTTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp CTATGCAGAATAATTTTTGATCAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGATTCTGACAGCCACGTaGAAATCCTGTGGGGAACCA +
Preference number: 5 (lower is better)
Translates to: LCRIIFDQAGGLCQAPNKILTAT*KSCGEP
Trigger: TGGTTCCCCACAGGATTTCAACGTGGCTGTCAGAAT...CTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTGATCAAAAATTATTCTGCATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp TGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATGATGCTGGCTTATATTCTGACACTCACTaGGTTTTTGGCAGCAGGACT +
Preference number: 5 (lower is better)
Translates to: WVKRSLNCVLKCGYDAGLYSDTH*VFGSRT
Trigger: AGTCCTGCTGCCAAAAACCAAGTGAGTGTCAGAATA...TAAGCCAGCATCATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS TCA 90 bp CTGCCAAAACTCTTCACACGTGGCAGAAGTGTTCCAACAGATTGGTaGATTCTCCTCGACTCTTCTGTGAACTCCATGAAAGCAGAACAC +
Preference number: 5 (lower is better)
Translates to: LPKLFTRGRSVPTDW*ILLDSSVNSMKAEH
Trigger: GTGTTCTGCTTTCATGGAGTTCACAGAAGAGTCGAGGAGAATTCACCAATCTGTTGGAACACTTCTGCCACGTGTGAAGAGTTTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533902.2
CDS TCA 90 bp GGAAGAATGGTCATTGGAGCTAGAATATACTTGTGGCTGTCCCAGTaGACTCCTAGAAAAAGTAATCCCTCCACTTGCCTTTGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: GRMVIGARIYLWLSQ*TPRKSNPSTCLCWS
Trigger: GCTCCAGCAAAGGCAAGTGGAGGGATTACTTTTTCTAGGAGTTCACTGGGACAGCCACAAGTATATTCTAGCTCCAATGACCATTCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS TCA 90 bp ACAATGAACCCTCTGGGTAGTGCCAGAAATCCTACATGTGAAGCATaGTCACTGAAACATTCTGCGAGTGTGATCTGGGCCTGCAAATTG +
Preference number: 5 (lower is better)
Translates to: TMNPLGSARNPTCEA*SLKHSASVIWACKL
Trigger: CAATTTGCAGGCCCAGATCACACTCGCAGAATGTTTCAGTGATCATGCTTCACATGTAGGATTTCTGGCACTACCCAGAGGGTTCATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS GCA 90 bp CTCATGGCCATCTTGGTTTTGGTGGGCTTCAGCTGGCTTCTTTACTaGAACCTATTTTATCAGCAAGGTCTTGATGACCTGTATCTTGGC +
Preference number: 5 (lower is better)
Translates to: LMAILVLVGFSWLLY*NLFYQQGLDDLYLG
Trigger: GCCAAGATACAGGTCATCAAGACCTTGCTGATAAAATAGGTTGCAGTAAAGAAGCCAGCTGAAGCCCACCAAAACCAAGATGGCCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 90 bp ATCACTTCAGGCATGTGGATTTGGTCTGCCAAAACTCTTCACACGTaGCAGAAGTGTTCCAACAGATTGGTGAATTCTCCTCGACTCTTC +
Preference number: 5 (lower is better)
Translates to: ITSGMWIWSAKTLHT*QKCSNRLVNSPRLF
Trigger: GAAGAGTCGAGGAGAATTCACCAATCTGTTGGAACACTTCTGCCACGTGTGAAGAGTTTTGGCAGACCAAATCCACATGCCTGAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533902.2
CDS-3UTR CAA 90 bp CAGGCTGGAGGACTGTGCCAGGCTCCAAACAAGTGGTTATTCTGTTGTGACATCTTCATAAGACAGATATaGCTTGGCCTCTTCGTAAGT +
Preference number: 5 (lower is better)
Translates to: QAGGLCQAPNKWLFCCDIFIRQI*LGLFVS
Trigger: ACTTACGAAGAGGCCAAGCAATATCTGTCTTATGAA...GATGTCACAACAGAATAACCACTTGTTTGGAGCCTGGCACAGTCCTCCAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp GAGCACACTTTGGGAAATGTGGTTCTACTAGCCTTACTAGGCAAATATGCTTCTCCGATGTCATTGGCATaGCCCTTGATCCAACCCTTG +
Preference number: 5 (lower is better)
Translates to: EHTLGNVVLLALLGKYASPMSLA*PLIQPL
Trigger: CAAGGGTTGGATCAAGGGCAATGCCAATGACATCGG...AGAAGCATATTTGCCTAGTAAGGCTAGTAGAACCACATTTCCCAAAGTGTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp GTCAAAGTTCCTAAATGGGAACACTGCCTTATGGAAGCATTAAAGATCAGGCACTGGCTGGGCATCGCATaGCTGGTAGAGCAAGTCATA +
Preference number: 5 (lower is better)
Translates to: VKVPKWEHCLMEALKIRHWLGIA*LVEQVI
Trigger: TATGACTTGCTCTACCAGCAATGCGATGCCCAGCCA...GTGCCTGATCTTTAATGCTTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp GATCAGTACATCTGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATGAGGTGGTGGTTGAATaGAATTCGAAACTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: DQYIWVKRSLNCVLKCGYEVVVE*NSKLLS
Trigger: GCTCAACAGTTTCGAATTCAATTCAACCACCACCTC...ATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCAGATGTACTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp AGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCTTGGAACTTTGTTCATaGCTGCAGGTTTGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: RLPGSIQLSFVGAFGQTSLELCS*LQVWWP
Trigger: AGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAA...GGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCAGGCAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp GATCAGTACATCTGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATGCATTCAACTCAGCTTaGTGGGAGCATTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: DQYIWVKRSLNCVLKCGYAFNSA*WEHLVK
Trigger: TTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGC...ATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCAGATGTACTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp GTCAAAGTTCCTAAATGGGAACACTGCCTTATGGAAGCATTAAAGATCAGGCACTCCATGCCGATGTCATaGGCATTGCCCTTGATCCAA +
Preference number: 5 (lower is better)
Translates to: VKVPKWEHCLMEALKIRHSMPMS*ALPLIQ
Trigger: TTGGATCAAGGGCAATGCCAATGACATCGGCATGGA...GTGCCTGATCTTTAATGCTTCCATAAGGCAGTGTTCCCATTTAGGAACTTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp AGAAAGCACTGTGGTTGTACGTTTCTTGAGTGCCTTATCAGAATTATCCTTCCATGTGGCCACAACTGTTaGCTGGGAGGAAATACAGCC +
Preference number: 5 (lower is better)
Translates to: RKHCGCTFLECLIRIILPCGHNC*LGGNTA
Trigger: GGCTGTATTTCCTCCCAGCAAACAGTTGTGGCCACA...TGGAAGGATAATTCTGATAAGGCACTCAAGAAACGTACAACCACAGTGCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp CCTTTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGTTGGAACTTTGTTCATaGCTGCAGGTTTGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: PLFCLCANVHREDQHPHWLELCS*LQVWWP
Trigger: AGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAA...CCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp GATCAGTACATCTGGGTGAAAAGGAGCCTGAACTGTGTGCTCAAGTGTGGCTATTTGGTCATTGGAACTTaGTTCATTGCTGCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: DQYIWVKRSLNCVLKCGYLVIGT*FIAAGL
Trigger: CAAACCTGCAGCAATGAACAAAGTTCCAATGACCAA...ATAGCCACACTTGAGCACACAGTTCAGGCTCCTTTTCACCCAGATGTACTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS TCA 90 bp TGTGTGCTGAAAGAAGCAGTGGGGTTCGGTGAGAGAGTATGGGTTTaGGTTTTGGCTCTCATGATGATTTGCTGTACAAACATACATCTG +
Preference number: 5 (lower is better)
Translates to: CVLKEAVGFGERVWV*VLALMMICCTNIHL
Trigger: CAGATGTATGTTTGTACAGCAAATCATCATGAGAGCCAAAACTCAAACCCATACTCTCTCACCGAACCCCACTGCTTCTTTCAGCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS TCA 90 bp CACATGACACTATCCCTATGTAAGACAAACAAATGTTTTTGTGGGTaGGAGGATGAGAGGAAGGGAGGAAAGAAGAGAAGGGGAGGAGTT +
Preference number: 5 (lower is better)
Translates to: HMTLSLCKTNKCFCG*EDERKGGKKRRGGV
Trigger: AACTCCTCCCCTTCTCTTCTTTCCTCCCTTCCTCTCATCCTCTCACCCACAAAAACATTTGTTTGTCTTACATAGGGATAGTGTCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS-3UTR CAA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTAGCTCCAAAGTCTGGCTaGGCTAAATTGAGGGTAGAC +
Preference number: 5 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLAPKSG*AKLRVD
Trigger: GTCTACCCTCAATTTAGCCAAGCCAGACTTTGGAGC...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp ATGTGTCTTTCAGTCAAGAGACGCTGTGAACCCGTCCTGAAGGAATTTGGATTTAAGTGTTCCAACAGATaGGTGAATTCTCCTCGACTC +
Preference number: 5 (lower is better)
Translates to: MCLSVKRRCEPVLKEFGFKCSNR*VNSPRL
Trigger: GAGTCGAGGAGAATTCACCAATCTGTTGGAACACTT...AAATCCAAATTCCTTCAGGACGGGTTCACAGCGTCTCTTGACTGAAAGACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533902.2
CDS-3UTR CAA 90 bp ATGTGTCTTTCAGTCAAGAGACGCTGTGAACCCGTCCTGAAGGAATTTGGATTTGCAGGTTTGGTGGCCTaGTTCAAAATTCGGTCAAAT +
Preference number: 5 (lower is better)
Translates to: MCLSVKRRCEPVLKEFGFAGLVA*FKIRSN
Trigger: ATTTGACCGAATTTTGAACAAGGCCACCAAACCTGC...AAATCCAAATTCCTTCAGGACGGGTTCACAGCGTCTCTTGACTGAAAGACACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp GTGGATGCAGATGAACTGACTGGCTTGTGCTATGTTGGAAACCAAAATCTCGATGATGAACTGACTGGCTaGTGCTATGTTGGAAACCAA +
Preference number: 5 (lower is better)
Translates to: VDADELTGLCYVGNQNLDDELTG*CYVGNQ
Trigger: TTGGTTTCCAACATAGCACAAGCCAGTCAGTTCATC...ATCGAGATTTTGGTTTCCAACATAGCACAAGCCAGTCAGTTCATCTGCATCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp TGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACGCATTCAACTCAGCTTaGTGGGAGCATTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: CRFGGLVQNSVKSSKGWDAFNSA*WEHLVK
Trigger: TTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGC...GTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp TGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCAAGTCATTGATTATCAGGCGCCCTaGTTTGAGGTCAGAGTAAAC +
Preference number: 5 (lower is better)
Translates to: WKHSTQLCGSIWSNFQVIDYQAP*FEVRVN
Trigger: GTTTACTCTGACCTCAAACAAGGGCGCCTGATAATC...AATGACTTGGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp GGCTCCCCTCTTTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTTCAACATCTCTCTTCTaGGCTGCTGCTGTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: GSPLYLFGHWNFVHCCRFSTSLF*AAAVFF
Trigger: GAAGAAAACAGCAGCAGCCAAGAAGAGAGATGTTGA...AAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532234.5
CDS-3UTR CAA 90 bp ATTGCTGCAGGTTTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATTTGAATTCGAAACTGTaGAGCCCTCTCGCTTCACAG +
Preference number: 5 (lower is better)
Translates to: IAAGLVALFKIRSNLQKDLNSKL*SPLASQ
Trigger: CTGTGAAGCGAGAGGGCTCAACAGTTTCGAATTCAA...ATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAAACCTGCAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp CCTTTGTTCTGTTTATGTGCCAATGTGCACAGAGAAGATCAACATCCCCATTGGTTCATTGCTGCAGGTTaGGTGGCCTTGTTCAAAATT +
Preference number: 5 (lower is better)
Translates to: PLFCLCANVHREDQHPHWFIAAG*VALFKI
Trigger: AATTTTGAACAAGGCCACCAAACCTGCAGCAATGAA...CCAATGGGGATGTTGATCTTCTCTGTGCACATTGGCACATAAACAGAACAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp AGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGGAGCATTTGGTCAAACTTCCCCCCTCTTTACTTATTaGGTCATTGGAACTTTGTTC +
Preference number: 5 (lower is better)
Translates to: RLPGSIQLSFVGAFGQTSPLFTY*VIGTLF
Trigger: GAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGG...GGAAGTTTGACCAAATGCTCCCACAAAGCTGAGTTGAATGCTTCCAGGCAATCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS TCA 90 bp TCCAGGAGCTTAAAAGATACTTCTCCTTTCAGCCACCCAGTCACATaGCACTATCCCTATGTAAGACAAACAAATGTTTTTGTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: SRSLKDTSPFSHPVT*HYPYVRQTNVFVGE
Trigger: CTCACCCACAAAAACATTTGTTTGTCTTACATAGGGATAGTGTCATGTGACTGGGTGGCTGAAAGGAGAAGTATCTTTTAAGCTCCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS GCA 90 bp TTAGGGCACATGTACTGGTCCCAGTTTGCAATTTCAAAAGAGGCTTaGATCCTAAGAGGCTTTTGGACATGTTCCATTTATGCAGCATTA +
Preference number: 5 (lower is better)
Translates to: LGHMYWSQFAISKEA*ILRGFWTCSIYAAL
Trigger: TAATGCTGCATAAATGGAACATGTCCAAAAGCCTCTTAGGATGCAAGCCTCTTTTGAAATTGCAAACTGGGACCAGTACATGTGCCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS-3UTR CAA 90 bp GAGCACACTTTGGGAAATGTGGTTCTACTAGCCTTACTAGGCAAATATGCTTCTGAAGATACTTCTAATTaGGCTTCGGCTCCAAAGTCT +
Preference number: 5 (lower is better)
Translates to: EHTLGNVVLLALLGKYASEDTSN*ASAPKS
Trigger: AGACTTTGGAGCCGAAGCCAAATTAGAAGTATCTTC...AGAAGCATATTTGCCTAGTAAGGCTAGTAGAACCACATTTCCCAAAGTGTGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp AGAAAGCACTGTGGTTGTACGTTTCTTGAGTGCCTTATCAGAATTATCCTTCCAGGTATGACTTTAAAGTaGGGAGGGCCATATGCAAAG +
Preference number: 5 (lower is better)
Translates to: RKHCGCTFLECLIRIILPGMTLK*GGPYAK
Trigger: CTTTGCATATGGCCCTCCCAACTTTAAAGTCATACC...TGGAAGGATAATTCTGATAAGGCACTCAAGAAACGTACAACCACAGTGCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp TTGGTGGCCTTGTTCAAAATTCGGTCAAATCTTCAAAAGGATGGGACAAAGACAGAGGTGGTGGTTGAATaGAATTCGAAACTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: LVALFKIRSNLQKDGTKTEVVVE*NSKLLS
Trigger: GCTCAACAGTTTCGAATTCAATTCAACCACCACCTC...TGTCTTTGTCCCATCCTTTTGAAGATTTGACCGAATTTTGAACAAGGCCACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp GTGGATGCAGATGAACTGACTGGCTTGTGCTATGTTGGAAACCAAAATCTCGATCCCCTCTTTACTTATTaGGTCATTGGAACTTTGTTC +
Preference number: 5 (lower is better)
Translates to: VDADELTGLCYVGNQNLDPLFTY*VIGTLF
Trigger: GAACAAAGTTCCAATGACCAAATAAGTAAAGAGGGG...ATCGAGATTTTGGTTTCCAACATAGCACAAGCCAGTCAGTTCATCTGCATCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp TTACTTATTTGGTCATTGGAACTTTGTTCATTGCTGCAGGTTTGGTGGCCTTGTCTGGCTTGTGCTATGTaGGAAACCAAAATCTCGATG +
Preference number: 5 (lower is better)
Translates to: LLIWSLELCSLLQVWWPCLACAM*ETKISM
Trigger: CATCGAGATTTTGGTTTCCAACATAGCACAAGCCAG...ACAAGGCCACCAAACCTGCAGCAATGAACAAAGTTCCAATGACCAAATAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp TGGTTTAAAAGTAGATACCTAGATTGCCTGGAAGCATTCAACTCAGCTTTGTGGTTGGTCATTGGAACTTaGTTCATTGCTGCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: WFKSRYLDCLEAFNSALWLVIGT*FIAAGL
Trigger: CAAACCTGCAGCAATGAACAAAGTTCCAATGACCAA...CCACAAAGCTGAGTTGAATGCTTCCAGGCAATCTAGGTATCTACTTTTAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS-3UTR CAA 90 bp GAGCACACTTTGGGAAATGTGGTTCTACTAGCCTTACTAGGCAAATATGCTTCTGAATATCCTTACAAATaGCTACAATGCAGGTTTACC +
Preference number: 5 (lower is better)
Translates to: EHTLGNVVLLALLGKYASEYPYK*LQCRFT
Trigger: GGTAAACCTGCATTGTAGCAATTTGTAAGGATATTC...AGAAGCATATTTGCCTAGTAAGGCTAGTAGAACCACATTTCCCAAAGTGTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTAGTGGTTGTACGTTTCTaGAGTGCCTTATCAGAATTA +
Preference number: 5 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLVVVRF*SALSEL
Trigger: TAATTCTGATAAGGCACTCAAGAAACGTACAACCAC...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTATTTAAGGAGCACACTTaGGGAAATGTGGTTCTACTA +
Preference number: 5 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLFKEHT*GNVVLL
Trigger: TAGTAGAACCACATTTCCCAAAGTGTGCTCCTTAAA...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS CCA 90 bp TATTTTTATATCACACCTGCTCCTGTAAATGATGTTTGTCCTAAGTaGCTACATATACCTAAGGCAGCACCAAGTAGTAGAAAGAGCATG +
Preference number: 5 (lower is better)
Translates to: YFYITPAPVNDVCPK*LHIPKAAPSSRKSM
Trigger: CATGCTCTTTCTACTACTTGGTGCTGCCTTAGGTATATGTAGCCACTTAGGACAAACATCATTTACAGGAGCAGGTGTGATATAAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS-3UTR CAA 90 bp CCCAGAGAATGTCTAAGTGACAGTGCTCCATCTGAATATCCTTACAAATTGCTAAGAAAAGTTTCCAAATaGAAGAAGTACATAGCTCCC +
Preference number: 5 (lower is better)
Translates to: PRECLSDSAPSEYPYKLLRKVSK*KKYIAP
Trigger: GGGAGCTATGTACTTCTTCAATTTGGAAACTTTTCT...TAGCAATTTGTAAGGATATTCAGATGGAGCACTGTCACTTAGACATTCTCTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS-3UTR CAA 90 bp CGGTATTCTGCAGATGATTCCAACATGGCTGTTGAAATGTTGAAAATTTTTATGCGATGTTCTCTTCTCTaGATTGATGATTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: RYSADDSNMAVEMLKIFMRCSLL*IDDSSE
Trigger: CTCTGAGGAATCATCAATCAAGAGAAGAGAACATCG...CATAAAAATTTTCAACATTTCAACAGCCATGTTGGAATCATCTGCAGAATACCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532234.5
CDS GCA 90 bp AAAAGAGGCTTGCATCCTAAGAGGCTTTTGGACATGTTCCATTTATaGAGCATTAATGTTCTAAATGTTCTAAATGTAAGAGTAAGGGTG +
Preference number: 5 (lower is better)
Translates to: KRGLHPKRLLDMFHL*SINVLNVLNVRVRV
Trigger: CACCCTTACTCTTACATTTAGAACATTTAGAACATTAATGCTGCATAAATGGAACATGTCCAAAAGCCTCTTAGGATGCAAGCCTCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp CCCGGGCCGCGGCTCGCTGCGCCGCTCAGACAGGTGTaGGCGCCGGGAGAGAGCGCGCGGCTCCCATGCCTG +
Preference number: 6 (lower is better)
Translates to: PGPRLAAPLRQV*APGESARLPCL
Trigger: CAGGCATGGGAGCCGCGCGCTCTCTCCCGGCGCCCACACCTGTCTGAGCGGCGCAGCGAGCCGCGGCCCGGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000280258.6
ENST00000531475.5
ENST00000532234.5
ENST00000533880.1
ENST00000533902.2
CDS GCA 72 bp TGTGGGCGCCGGGAGAGAGCGCGCGGCTCCCATGCCTaGCCCGCCGCACAGCCGAGTGCGAGCAAGCTGGCG +
Preference number: 6 (lower is better)
Translates to: CGRRERARGSHA*PAAQPSASKLA
Trigger: CGCCAGCTTGCTCGCACTCGGCTGTGCGGCGGGGCAGGCATGGGAGCCGCGCGCTCTCTCCCGGCGCCCACA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS GCA 72 bp CAGGTGTGGGCGCCGGGAGAGAGCGCGCGGCTCCCATaGCTGCCCCGCCGCACAGCCGAGTGCGAGCAAGCT +
Preference number: 6 (lower is better)
Translates to: QVWAPGESARLP*LPRRTAECEQA
Trigger: AGCTTGCTCGCACTCGGCTGTGCGGCGGGGCAGGCATGGGAGCCGCGCGCTCTCTCCCGGCGCCCACACCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532234.5
ENST00000533902.2
CDS CCA 72 bp GGGGCAAGACGACAGGGAGGCGGTATGCAGGCCAAGTaGGTTTCCAGGGGGCACTGTAAGGGCTCACTTGCC +
Preference number: 6 (lower is better)
Translates to: GARRQGGGMQAK*VSRGHCKGSLA
Trigger: GGCAAGTGAGCCCTTACAGTGCCCCCTGGAAACCCACTTGGCCTGCATACCGCCTCCCTGTCGTCTTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280258.6
ENST00000527521.1
CDS GCA 72 bp GAGGGTAGACTGGGGCAAGACGACAGGGAGGCGGTATaGAGGCCAAGTGGGTTTCCAGGGGGCACTGTAAGG +
Preference number: 6 (lower is better)
Translates to: EGRLGQDDREAV*RPSGFPGGTVR
Trigger: CCTTACAGTGCCCCCTGGAAACCCACTTGGCCTGCATACCGCCTCCCTGTCGTCTTGCCCCAGTCTACCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280258.6
ENST00000527521.1
CDS CAA 90 bp CTCCTTGGCAGGAGTAGTTTGGTCAGCGTGCCCGCCAGCCTGCTTTaGAAAGGACGACCTCCAGCTGTCTCCAGAGGTAGCCACCCACCC +
Preference number: 6 (lower is better)
Translates to: LLGRSSLVSVPASLL*KGRPPAVSRGSHPP
Trigger: GGGTGGGTGGCTACCTCTGGAGACAGCTGGAGGTCGTCCTTTCAAAAGCAGGCTGGCGGGCACGCTGACCAAACTACTCCTGCCAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS TCA 72 bp CTGAGTCTCGGTGTTGGGCCCCATCTCCACTACTGCTaGGGATGTAGATGCCCACCTGCGTCTCTGTGCGGC +
Preference number: 6 (lower is better)
Translates to: LSLGVGPHLHYC*GCRCPPASLCG
Trigger: GCCGCACAGAGACGCAGGTGGGCATCTACATCCTCAGCAGTAGTGGAGATGGGGCCCAACACCGAGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280258.6
ENST00000527521.1
CDS CAA 90 bp CCTCCACTGCAGCTCTGCGCCTGTGCTCCTGGAGGAAGGGTGAGTTaGCAGGGTGACAGCTCTGTGGAACCTGTCACACTGACAGAGGCA +
Preference number: 6 (lower is better)
Translates to: PPLQLCACAPGGRVS*QGDSSVEPVTLTEA
Trigger: TGCCTCTGTCAGTGTGACAGGTTCCACAGAGCTGTCACCCTGCAAACTCACCCTTCCTCCAGGAGCACAGGCGCAGAGCTGCAGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527521.1
CDS TCA 72 bp GGAGTAGTTTGGTCAGCGTGCCCGCCAGCCTGCTTTTaGAAGGACGACCTCCAGCTGTCTCCAGAGGTAGCC +
Preference number: 6 (lower is better)
Translates to: GVVWSACPPACF*KDDLQLSPEVA
Trigger: GGCTACCTCTGGAGACAGCTGGAGGTCGTCCTTTCAAAAGCAGGCTGGCGGGCACGCTGACCAAACTACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 90 bp CCTCACATAGACCCCAGACCCGCTGGCCCCTGGCTGGGCATCGCATaGCTGGTAGAGCAAGTCATAGGTCTCGTCTTTGACGTCACAGAA +
Preference number: 6 (lower is better)
Translates to: PHIDPRPAGPWLGIA*LVEQVIGLVFDVTE
Trigger: TTCTGTGACGTCAAAGACGAGACCTATGACTTGCTCTACCAGCAATGCGATGCCCAGCCAGGGGCCAGCGGGTCTGGGGTCTATGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS CCA 72 bp TGTGGCTGGCAGGGCTGGATTCCTGGGTTTGCAACATaGGCAGTCATTCAGAGCCCTGTGCTTAGACAGGCC +
Preference number: 6 (lower is better)
Translates to: CGWQGWIPGFAT*AVIQSPVLRQA
Trigger: GGCCTGTCTAAGCACAGGGCTCTGAATGACTGCCCATGTTGCAAACCCAGGAATCCAGCCCTGCCAGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 72 bp AGAAGTCCAGTCCAAAGGAACCACAGCAATGGCTCCTaGGCAGGAGTAGTTTGGTCAGCGTGCCCGCCAGCC +
Preference number: 6 (lower is better)
Translates to: RSPVQRNHSNGS*AGVVWSACPPA
Trigger: GGCTGGCGGGCACGCTGACCAAACTACTCCTGCCAAGGAGCCATTGCTGTGGTTCCTTTGGACTGGACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 90 bp TCCAGTCCAAAGGAACCACAGCAATGGCTCCTTGGCAGGAGTAGTTaGGTCAGCGTGCCCGCCAGCCTGCTTTTGAAAGGACGACCTCCA +
Preference number: 6 (lower is better)
Translates to: SSPKEPQQWLLGRSS*VSVPASLLLKGRPP
Trigger: TGGAGGTCGTCCTTTCAAAAGCAGGCTGGCGGGCACGCTGACCAAACTACTCCTGCCAAGGAGCCATTGCTGTGGTTCCTTTGGACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS TCA 72 bp CCCTTGGGCACATGGGTGCGTTTCACCCGGATCCACTaGAATTTCATCTGCTCGGGCATGGCTGAAGTGGAG +
Preference number: 6 (lower is better)
Translates to: PLGTWVRFTRIH*NFICSGMAEVE
Trigger: CTCCACTTCAGCCATGCCCGAGCAGATGAAATTTCAGTGGATCCGGGTGAAACGCACCCATGTGCCCAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS CCA 72 bp TCACCCGGATCCACTGAAATTTCATCTGCTCGGGCATaGCTGAAGTGGAGTCGTTGGCCCCTCGACCACCAT +
Preference number: 6 (lower is better)
Translates to: SPGSTEISSARA*LKWSRWPLDHH
Trigger: ATGGTGGTCGAGGGGCCAACGACTCCACTTCAGCCATGCCCGAGCAGATGAAATTTCAGTGGATCCGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS TCA 72 bp CCGGATCCACTGAAATTTCATCTGCTCGGGCATGGCTaGAGTGGAGTCGTTGGCCCCTCGACCACCATCTTT +
Preference number: 6 (lower is better)
Translates to: PDPLKFHLLGHG*SGVVGPSTTIF
Trigger: AAAGATGGTGGTCGAGGGGCCAACGACTCCACTTCAGCCATGCCCGAGCAGATGAAATTTCAGTGGATCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS GCA 72 bp GGAGTCCTCTCTGTTTGTTTCAGAGGGATTAGTTATTaGCTGGGGGCCCTGTGTGGACCCATCCCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: GVLSVCFRGISY*LGALCGPIPWS
Trigger: GCTCCAAGGGATGGGTCCACACAGGGCCCCCAGGCAATAACTAATCCCTCTGAAACAAACAGAGAGGACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp GAGAGTCAGAAGTCCAGTCCAAAGGAACCACAGCAATaGCTCCTTGGCAGGAGTAGTTTGGTCAGCGTGCCC +
Preference number: 6 (lower is better)
Translates to: ESQKSSPKEPQQ*LLGRSSLVSVP
Trigger: GGGCACGCTGACCAAACTACTCCTGCCAAGGAGCCATTGCTGTGGTTCCTTTGGACTGGACTTCTGACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 72 bp AAGGAACCACAGCAATGGCTCCTTGGCAGGAGTAGTTaGGTCAGCGTGCCCGCCAGCCTGCTTTTGAAAGGA +
Preference number: 6 (lower is better)
Translates to: KEPQQWLLGRSS*VSVPASLLLKG
Trigger: TCCTTTCAAAAGCAGGCTGGCGGGCACGCTGACCAAACTACTCCTGCCAAGGAGCCATTGCTGTGGTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp GAGTGTAGCAGTGAGGACAACCAGAGGTCACTCTCATaGCCATCTTGGTTTTGGTGGGCTTCAGCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: ECSSEDNQRSLS*PSWFWWASAGF
Trigger: GAAGCCAGCTGAAGCCCACCAAAACCAAGATGGCCATGAGAGTGACCTCTGGTTGTCCTCACTGCTACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 72 bp CCAAGTGGGTTTCCAGGGGGCACTGTAAGGGCTCACTaGCCCAACAGCACAGAGCAGAAAGAAGAGAAGGAA +
Preference number: 6 (lower is better)
Translates to: PSGFPGGTVRAH*PNSTEQKEEKE
Trigger: TTCCTTCTCTTCTTTCTGCTCTGTGCTGTTGGGCAAGTGAGCCCTTACAGTGCCCCCTGGAAACCCACTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280258.6
ENST00000527521.1
CDS CCA 72 bp GTCATTGTCATAACCAGAGAAGTGAATTCTGCCCCCTaGCAGCTGCTTAGCAGGAGGGCTCACCCCAATCTT +
Preference number: 6 (lower is better)
Translates to: VIVITREVNSAP*QLLSRRAHPNL
Trigger: AAGATTGGGGTGAGCCCTCCTGCTAAGCAGCTGCCAGGGGGCAGAATTCACTTCTCTGGTTATGACAATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS CCA 72 bp TCCTCTCTGTTTGTTTCAGAGGGATTAGTTATTGCCTaGGGGCCCTGTGTGGACCCATCCCTTGGAGCTGTT +
Preference number: 6 (lower is better)
Translates to: SSLFVSEGLVIA*GPCVDPSLGAV
Trigger: AACAGCTCCAAGGGATGGGTCCACACAGGGCCCCCAGGCAATAACTAATCCCTCTGAAACAAACAGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp TTGCAAACTGAATTGTGGCTGGCAGGGCTGGATTCCTaGGTTTGCAACATGGGCAGTCATTCAGAGCCCTGT +
Preference number: 6 (lower is better)
Translates to: LQTELWLAGLDS*VCNMGSHSEPC
Trigger: ACAGGGCTCTGAATGACTGCCCATGTTGCAAACCCAGGAATCCAGCCCTGCCAGCCACAATTCAGTTTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp CATTGCCATGGCATCTGTAAACTGTCATGGTGCTGGTaGGAGTGTAGCAGTGAGGACAACCAGAGGTCACTC +
Preference number: 6 (lower is better)
Translates to: HCHGICKLSWCW*ECSSEDNQRSL
Trigger: GAGTGACCTCTGGTTGTCCTCACTGCTACACTCCCACCAGCACCATGACAGTTTACAGATGCCATGGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 90 bp ATGGCTGAAGTGGAGTCGTTGGCCCCTCGACCACCATCTTTAAACTaGGGCTTTAGGAAGCCCACTCGAAGCTTCTGGGTTCCTTTCACA +
Preference number: 6 (lower is better)
Translates to: MAEVESLAPRPPSLN*GFRKPTRSFWVPFT
Trigger: TGTGAAAGGAACCCAGAAGCTTCGAGTGGGCTTCCTAAAGCCCAAGTTTAAAGATGGTGGTCGAGGGGCCAACGACTCCACTTCAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS CAA 90 bp GCCAGGTCCTGGAACCTAGTTGGTATTCAGGAGGTGGTGGTTGAATaGAATTCGAAACTGTTGAGCCCTCTCGCTTCACAGTTGTGGGGG +
Preference number: 6 (lower is better)
Translates to: ARSWNLVGIQEVVVE*NSKLLSPLASQLWG
Trigger: CCCCCACAACTGTGAAGCGAGAGGGCTCAACAGTTTCGAATTCAATTCAACCACCACCTCCTGAATACCAACTAGGTTCCAGGACCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000531475.5
ENST00000532234.5
ENST00000532572.1
ENST00000533880.1
ENST00000533902.2
CDS CAA 90 bp CATGAAGAAGATACTTCTAATTTGGCTTCGGCTCCAAAGTCTGGCTaGGCTAAATTGAGGGTAGACTGGGGCAAGACGACAGGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: HEEDTSNLASAPKSG*AKLRVDWGKTTGRR
Trigger: CCGCCTCCCTGTCGTCTTGCCCCAGTCTACCCTCAATTTAGCCAAGCCAGACTTTGGAGCCGAAGCCAAATTAGAAGTATCTTCTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280258.6
ENST00000527521.1
CDS TCA 72 bp AATCATAATCCATGCCGATGTCATTGGCATTGCCCTTaGTCCAACCCTTGGGCACATGGGTGCGTTTCACCC +
Preference number: 6 (lower is better)
Translates to: NHNPCRCHWHCP*SNPWAHGCVSP
Trigger: GGGTGAAACGCACCCATGTGCCCAAGGGTTGGATCAAGGGCAATGCCAATGACATCGGCATGGATTATGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS TCA 72 bp GTGAGTCCGACCTCACATCGAGAGAAGCCACAACAGTaGCCAACCCTTACAGAGGGAGATTTGATGACAGAC +
Preference number: 6 (lower is better)
Translates to: VSPTSHREKPQQ*PTLTEGDLMTD
Trigger: GTCTGTCATCAAATCTCCCTCTGTAAGGGTTGGTCACTGTTGTGGCTTCTCTCGATGTGAGGTCGGACTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532572.1
ENST00000533880.1
CDS CCA 72 bp TGTAGATGCCCACCTGCGTCTCTGTGCGGCTGCCATTaGCATAGAGCGTTTCATAAGACAGATATTGCTTGG +
Preference number: 6 (lower is better)
Translates to: CRCPPASLCGCH*HRAFHKTDIAW
Trigger: CCAAGCAATATCTGTCTTATGAAACGCTCTATGCCAATGGCAGCCGCACAGAGACGCAGGTGGGCATCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280258.6
ENST00000527521.1
CDS CCA 72 bp AGATGCCATTGCAAACTGAATTGTGGCTGGCAGGGCTaGATTCCTGGGTTTGCAACATGGGCAGTCATTCAG +
Preference number: 6 (lower is better)
Translates to: RCHCKLNCGWQG*IPGFATWAVIQ
Trigger: CTGAATGACTGCCCATGTTGCAAACCCAGGAATCCAGCCCTGCCAGCCACAATTCAGTTTGCAATGGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp AGTGAGGACAACCAGAGGTCACTCTCATGGCCATCTTaGTTTTGGTGGGCTTCAGCTGGCTTCTTTACTGCA +
Preference number: 6 (lower is better)
Translates to: SEDNQRSLSWPS*FWWASAGFFTA
Trigger: TGCAGTAAAGAAGCCAGCTGAAGCCCACCAAAACCAAGATGGCCATGAGAGTGACCTCTGGTTGTCCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 72 bp AATTTCATCTGCTCGGGCATGGCTGAAGTGGAGTCGTaGGCCCCTCGACCACCATCTTTAAACTTGGGCTTT +
Preference number: 6 (lower is better)
Translates to: NFICSGMAEVES*APRPPSLNLGF
Trigger: AAAGCCCAAGTTTAAAGATGGTGGTCGAGGGGCCAACGACTCCACTTCAGCCATGCCCGAGCAGATGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS CAA 72 bp AAGTTTCTCAGCCTCACTGAGCCGCACTCTTCCCACTaGGGGTATGGGAGCACCTCCCTCCCTATAATATTA +
Preference number: 6 (lower is better)
Translates to: KFLSLTEPHSSH*GYGSTSLPIIL
Trigger: TAATATTATAGGGAGGGAGGTGCTCCCATACCCCAAGTGGGAAGAGTGCGGCTCAGTGAGGCTGAGAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 72 bp GGACAACCAGAGGTCACTCTCATGGCCATCTTGGTTTaGGTGGGCTTCAGCTGGCTTCTTTACTGCAACCTA +
Preference number: 6 (lower is better)
Translates to: GQPEVTLMAILV*VGFSWLLYCNL
Trigger: TAGGTTGCAGTAAAGAAGCCAGCTGAAGCCCACCAAAACCAAGATGGCCATGAGAGTGACCTCTGGTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 90 bp CTCTGTGCGGCTGCCATTGGCATAGAGCGTTTCATAAGACAGATATaGCTTGGCCTCTTCGTAAGTGGGCAGTGGAGTTCCCTTATGACA +
Preference number: 6 (lower is better)
Translates to: LCAAAIGIERFIRQI*LGLFVSGQWSSLMT
Trigger: TGTCATAAGGGAACTCCACTGCCCACTTACGAAGAGGCCAAGCAATATCTGTCTTATGAAACGCTCTATGCCAATGGCAGCCGCACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280258.6
ENST00000527521.1
CDS CAA 90 bp TATGAAGCTTTTCTGCTTCAGTGGGAGATGCCATTGCAAACTGAATaGTGGCTGGCAGGGCTGGATTCCTGGGTTTGCAACATGGGCAGT +
Preference number: 6 (lower is better)
Translates to: YEAFLLQWEMPLQTE*WLAGLDSWVCNMGS
Trigger: ACTGCCCATGTTGCAAACCCAGGAATCCAGCCCTGCCAGCCACAATTCAGTTTGCAATGGCATCTCCCACTGAAGCAGAAAAGCTTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 90 bp CCTGCAAATTGCTATGAAGCTTTTCTGCTTCAGTGGGAGATGCCATaGCAAACTGAATTGTGGCTGGCAGGGCTGGATTCCTGGGTTTGC +
Preference number: 6 (lower is better)
Translates to: PANCYEAFLLQWEMP*QTELWLAGLDSWVC
Trigger: GCAAACCCAGGAATCCAGCCCTGCCAGCCACAATTCAGTTTGCAATGGCATCTCCCACTGAAGCAGAAAAGCTTCATAGCAATTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS TCA 72 bp CGCATTGCTGGTAGAGCAAGTCATAGGTCTCGTCTTTaGCGTCACAGAAGCGATACACCAAATTGCCTGGTC +
Preference number: 6 (lower is better)
Translates to: RIAGRASHRSRL*RHRSDTPNCLV
Trigger: GACCAGGCAATTTGGTGTATCGCTTCTGTGACGTCAAAGACGAGACCTATGACTTGCTCTACCAGCAATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS TCA 72 bp CCTCTGGGTAGTGCCAGAAATCCTACATGTGAAGCATaGTCACTGAAACATTCTGCGAGTGTGATCTGGGCC +
Preference number: 6 (lower is better)
Translates to: PLGSARNPTCEA*SLKHSASVIWA
Trigger: GGCCCAGATCACACTCGCAGAATGTTTCAGTGATCATGCTTCACATGTAGGATTTCTGGCACTACCCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS GCA 72 bp GCTATGAAGCTTTTCTGCTTCAGTGGGAGATGCCATTaGAAACTGAATTGTGGCTGGCAGGGCTGGATTCCT +
Preference number: 6 (lower is better)
Translates to: AMKLFCFSGRCH*KLNCGWQGWIP
Trigger: AGGAATCCAGCCCTGCCAGCCACAATTCAGTTTGCAATGGCATCTCCCACTGAAGCAGAAAAGCTTCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS GCA 72 bp TCATCCTGTGACTTAGAATGCCTAACCGTCTGGGAATaGAGCCCAGTAGGTCTCAGCCTTATTTTACCCAGC +
Preference number: 6 (lower is better)
Translates to: SSCDLECLTVWE*SPVGLSLILPS
Trigger: GCTGGGTAAAATAAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAGGCATTCTAAGTCACAGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp TTTTCTGTCCTGGTGTCTCTGCTTCTAGCCAGGTCCTaGAACCTAGTTGGTATTCAGGAGGTGGTGGTTGAA +
Preference number: 6 (lower is better)
Translates to: FSVLVSLLLARS*NLVGIQEVVVE
Trigger: TTCAACCACCACCTCCTGAATACCAACTAGGTTCCAGGACCTGGCTAGAAGCAGAGACACCAGGACAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000531475.5
ENST00000532234.5
ENST00000532572.1
ENST00000533880.1
ENST00000533902.2
CDS CCA 72 bp GACAACCAGAGGTCACTCTCATGGCCATCTTGGTTTTaGTGGGCTTCAGCTGGCTTCTTTACTGCAACCTAT +
Preference number: 6 (lower is better)
Translates to: DNQRSLSWPSWF*WASAGFFTATY
Trigger: ATAGGTTGCAGTAAAGAAGCCAGCTGAAGCCCACCAAAACCAAGATGGCCATGAGAGTGACCTCTGGTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 72 bp GCTGCCATTGGCATAGAGCGTTTCATAAGACAGATATaGCTTGGCCTCTTCGTAAGTGGGCAGTGGAGTTCC +
Preference number: 6 (lower is better)
Translates to: AAIGIERFIRQI*LGLFVSGQWSS
Trigger: GGAACTCCACTGCCCACTTACGAAGAGGCCAAGCAATATCTGTCTTATGAAACGCTCTATGCCAATGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280258.6
ENST00000527521.1
CDS CAA 72 bp TGGGCATATTTGAGAGGAGTGATTCTGACAGCCACGTaGAAATCCTGTGGGGAACCATTCATGTCCACCCAC +
Preference number: 6 (lower is better)
Translates to: WAYLRGVILTAT*KSCGEPFMSTH
Trigger: GTGGGTGGACATGAATGGTTCCCCACAGGATTTCAACGTGGCTGTCAGAATCACTCCTCTCAAATATGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS TCA 72 bp ATGAGCTTATCTGCTGTGATGCTGATGTCCTGGATGTaGTTGATTACCCACCACTATCTTGGGGACCTGGGA +
Preference number: 6 (lower is better)
Translates to: MSLSAVMLMSWM*LITHHYLGDLG
Trigger: TCCCAGGTCCCCAAGATAGTGGTGGGTAATCAATCACATCCAGGACATCAGCATCACAGCAGATAAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS TCA 72 bp CATTCTGCGAGTGTGATCTGGGCCTGCAAATTGCTATaGAGCTTTTCTGCTTCAGTGGGAGATGCCATTGCA +
Preference number: 6 (lower is better)
Translates to: HSASVIWACKLL*SFSASVGDAIA
Trigger: TGCAATGGCATCTCCCACTGAAGCAGAAAAGCTTCATAGCAATTTGCAGGCCCAGATCACACTCGCAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS GCA 72 bp CTGGGTTTGCAACATGGGCAGTCATTCAGAGCCCTGTaGTTAGACAGGCCTTGTGCTTTGTTTAATGCTTTG +
Preference number: 6 (lower is better)
Translates to: LGLQHGQSFRAL*LDRPCALFNAL
Trigger: CAAAGCATTAAACAAAGCACAAGGCCTGTCTAAGCACAGGGCTCTGAATGACTGCCCATGTTGCAAACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp TTTCATAAGACAGATATTGCTTGGCCTCTTCGTAAGTaGGCAGTGGAGTTCCCTTATGACACTGGGGTCCAC +
Preference number: 6 (lower is better)
Translates to: FHKTDIAWPLRK*AVEFPYDTGVH
Trigger: GTGGACCCCAGTGTCATAAGGGAACTCCACTGCCCACTTACGAAGAGGCCAAGCAATATCTGTCTTATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280258.6
ENST00000527521.1
CDS CAA 72 bp GATACTTCTAATTTGGCTTCGGCTCCAAAGTCTGGCTaGGCTAAATTGAGGGTAGACTGGGGCAAGACGACA +
Preference number: 6 (lower is better)
Translates to: DTSNLASAPKSG*AKLRVDWGKTT
Trigger: TGTCGTCTTGCCCCAGTCTACCCTCAATTTAGCCAAGCCAGACTTTGGAGCCGAAGCCAAATTAGAAGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280258.6
ENST00000527521.1
CDS CAA 72 bp GCTGGCTCCTGGCATCTGTTAGAGCCTCTGCCTATGTaGATCATTGCTGTATCCTCAGTCCTAGACTATAGT +
Preference number: 6 (lower is better)
Translates to: AGSWHLLEPLPM*IIAVSSVLDYS
Trigger: ACTATAGTCTAGGACTGAGGATACAGCAATGATCAACATAGGCAGAGGCTCTAACAGATGCCAGGAGCCAGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 90 bp TCAGAAGAGAGTCTTCAAGGAGGTCAGAGAATCCACAGCTCTGCTTaGTGCAGGGATGTCTCCTCTTCACCAAAGCATTTAGCATCCACT +
Preference number: 6 (lower is better)
Translates to: SEESLQGGQRIHSSA*CRDVSSSPKHLAST
Trigger: AGTGGATGCTAAATGCTTTGGTGAAGAGGAGACATCCCTGCACAAAGCAGAGCTGTGGATTCTCTGACCTCCTTGAAGACTCTCTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531475.5
ENST00000532572.1
ENST00000533880.1
CDS CAA 90 bp TGGTCTGCCAAAACTCTTCACACGTGGCAGAAGTGTTCCAACAGATaGGTGAATTCTCCTCGACTCTTCTGTGAACTCCATGAAAGCAGA +
Preference number: 6 (lower is better)
Translates to: WSAKTLHTWQKCSNR*VNSPRLFCELHESR
Trigger: TCTGCTTTCATGGAGTTCACAGAAGAGTCGAGGAGAATTCACCAATCTGTTGGAACACTTCTGCCACGTGTGAAGAGTTTTGGCAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533902.2
CDS CAA 90 bp AATTTTTGTACTGCAGCATGGTGTTTCTGGCGATGTTCTCTTCTCTaGATTGATGATTCCTCAGAGCCTGCCCACCTCCTAGGGCTAAAC +
Preference number: 6 (lower is better)
Translates to: NFCTAAWCFWRCSLL*IDDSSEPAHLLGLN
Trigger: GTTTAGCCCTAGGAGGTGGGCAGGCTCTGAGGAATCATCAATCAAGAGAAGAGAACATCGCCAGAAACACCATGCTGCAGTACAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532234.5
CDS TCA 72 bp CAACTCCAATCCCAGTTCCGTAACTTTCTAGCGATGTaGGCTTGGGTAAGTTACTTAACCTCTCTGGGCTTC +
Preference number: 6 (lower is better)
Translates to: QLQSQFRNFLAM*AWVSYLTSLGF
Trigger: GAAGCCCAGAGAGGTTAAGTAACTTACCCAAGCTCACATCGCTAGAAAGTTACGGAACTGGGATTGGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp GGCATGTGGATTTGGTCTGCCAAAACTCTTCACACGTaGCAGAAGTGTTCCAACAGATTGGTGAATTCTCCT +
Preference number: 6 (lower is better)
Translates to: GMWIWSAKTLHT*QKCSNRLVNSP
Trigger: AGGAGAATTCACCAATCTGTTGGAACACTTCTGCCACGTGTGAAGAGTTTTGGCAGACCAAATCCACATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533902.2
CDS CCA 72 bp TTCAGGTGTCTTTCCATGGCCACCAAAGTAAAGCCTTaGATTTGGGTGTCTGAGATACTGCTTGAGAGCCAT +
Preference number: 6 (lower is better)
Translates to: FRCLSMATKVKP*IWVSEILLESH
Trigger: ATGGCTCTCAAGCAGTATCTCAGACACCCAAATCCAAGGCTTTACTTTGGTGGCCATGGAAAGACACCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp GATGTCCTGGATGTGATTGATTACCCACCACTATCTTaGGGACCTGGGAATGACCTTCTGGATGCATTTGTA +
Preference number: 6 (lower is better)
Translates to: DVLDVIDYPPLS*GPGNDLLDAFV
Trigger: TACAAATGCATCCAGAAGGTCATTCCCAGGTCCCCAAGATAGTGGTGGGTAATCAATCACATCCAGGACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp AAAAGTAATCCCTCCACTTGCCTTTGCTGGAGCACATaGTTCAGGGATAGTTTAGGATCCCCTCTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: KSNPSTCLCWST*FRDSLGSPLSF
Trigger: AAAGGAGAGAGGGGATCCTAAACTATCCCTGAACCATGTGCTCCAGCAAAGGCAAGTGGAGGGATTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp ACTCCTAGAAAAAGTAATCCCTCCACTTGCCTTTGCTaGAGCACATGGTTCAGGGATAGTTTAGGATCCCCT +
Preference number: 6 (lower is better)
Translates to: TPRKSNPSTCLC*STWFRDSLGSP
Trigger: AGGGGATCCTAAACTATCCCTGAACCATGTGCTCCAGCAAAGGCAAGTGGAGGGATTACTTTTTCTAGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp CCTATCTCATCCTGTGACTTAGAATGCCTAACCGTCTaGGAATGCAGCCCAGTAGGTCTCAGCCTTATTTTA +
Preference number: 6 (lower is better)
Translates to: PISSCDLECLTV*ECSPVGLSLIL
Trigger: TAAAATAAGGCTGAGACCTACTGGGCTGCATTCCCAGACGGTTAGGCATTCTAAGTCACAGGATGAGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 72 bp TGGAACCTAGTTGGTATTCAGGAGGTGGTGGTTGAATaGAATTCGAAACTGTTGAGCCCTCTCGCTTCACAG +
Preference number: 6 (lower is better)
Translates to: WNLVGIQEVVVE*NSKLLSPLASQ
Trigger: CTGTGAAGCGAGAGGGCTCAACAGTTTCGAATTCAATTCAACCACCACCTCCTGAATACCAACTAGGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000531475.5
ENST00000532234.5
ENST00000532572.1
ENST00000533880.1
ENST00000533902.2
CDS CAA 72 bp AGTCTTCAAGGAGGTCAGAGAATCCACAGCTCTGCTTaGTGCAGGGATGTCTCCTCTTCACCAAAGCATTTA +
Preference number: 6 (lower is better)
Translates to: SLQGGQRIHSSA*CRDVSSSPKHL
Trigger: TAAATGCTTTGGTGAAGAGGAGACATCCCTGCACAAAGCAGAGCTGTGGATTCTCTGACCTCCTTGAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531475.5
ENST00000532572.1
ENST00000533880.1
CDS CAA 90 bp AAATGCCTAGCTGGCTCCTGGCATCTGTTAGAGCCTCTGCCTATGTaGATCATTGCTGTATCCTCAGTCCTAGACTATAGTAGGTATGAA +
Preference number: 6 (lower is better)
Translates to: KCLAGSWHLLEPLPM*IIAVSSVLDYSRYE
Trigger: TTCATACCTACTATAGTCTAGGACTGAGGATACAGCAATGATCAACATAGGCAGAGGCTCTAACAGATGCCAGGAGCCAGCTAGGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 90 bp TACATATACCTAAGGCAGCACCAAGTAGTAGAAAGAGCATGTACTTaGGAGTTGGCAGGGGTCAACTCCAATCCCAGTTCCGTAACTTTC +
Preference number: 6 (lower is better)
Translates to: YIYLRQHQVVERACT*ELAGVNSNPSSVTF
Trigger: GAAAGTTACGGAACTGGGATTGGAGTTGACCCCTGCCAACTCCAAAGTACATGCTCTTTCTACTACTTGGTGCTGCCTTAGGTATATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 90 bp GCTTCAGCTGGCTTCTTTACTGCAACCTATTTTATCAGCAAGGTCTaGATGACCTGTATCTTGGCTGACCTCCTATCTCATCCTGTGACT +
Preference number: 6 (lower is better)
Translates to: ASAGFFTATYFISKV*MTCILADLLSHPVT
Trigger: AGTCACAGGATGAGATAGGAGGTCAGCCAAGATACAGGTCATCAAGACCTTGCTGATAAAATAGGTTGCAGTAAAGAAGCCAGCTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS TCA 72 bp CTCTTCACACGTGGCAGAAGTGTTCCAACAGATTGGTaGATTCTCCTCGACTCTTCTGTGAACTCCATGAAA +
Preference number: 6 (lower is better)
Translates to: LFTRGRSVPTDW*ILLDSSVNSMK
Trigger: TTTCATGGAGTTCACAGAAGAGTCGAGGAGAATTCACCAATCTGTTGGAACACTTCTGCCACGTGTGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533902.2
CDS CCA 72 bp CATTGGCATAGAGCGTTTCATAAGACAGATATTGCTTaGCCTCTTCGTAAGTGGGCAGTGGAGTTCCCTTAT +
Preference number: 6 (lower is better)
Translates to: HWHRAFHKTDIA*PLRKWAVEFPY
Trigger: ATAAGGGAACTCCACTGCCCACTTACGAAGAGGCCAAGCAATATCTGTCTTATGAAACGCTCTATGCCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280258.6
ENST00000527521.1
CDS CCA 72 bp ACTCTCATGGCCATCTTGGTTTTGGTGGGCTTCAGCTaGCTTCTTTACTGCAACCTATTTTATCAGCAAGGT +
Preference number: 6 (lower is better)
Translates to: TLMAILVLVGFS*LLYCNLFYQQG
Trigger: ACCTTGCTGATAAAATAGGTTGCAGTAAAGAAGCCAGCTGAAGCCCACCAAAACCAAGATGGCCATGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 90 bp GGGTTGGGAAGAATCCTAAAGATAAGCTCCTGGGCTGAGTTGTTTTaGCCTTTGCCGTCCACAGCACTTTTCTCTTATGATGCATCTTTT +
Preference number: 6 (lower is better)
Translates to: GLGRILKISSWAELF*PLPSTALFSYDASF
Trigger: AAAAGATGCATCATAAGAGAAAAGTGCTGTGGACGGCAAAGGCAAAAACAACTCAGCCCAGGAGCTTATCTTTAGGATTCTTCCCAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS TCA 72 bp GTCATTGGAGCTAGAATATACTTGTGGCTGTCCCAGTaGACTCCTAGAAAAAGTAATCCCTCCACTTGCCTT +
Preference number: 6 (lower is better)
Translates to: VIGARIYLWLSQ*TPRKSNPSTCL
Trigger: AAGGCAAGTGGAGGGATTACTTTTTCTAGGAGTTCACTGGGACAGCCACAAGTATATTCTAGCTCCAATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp GTCTTTGACGTCACAGAAGCGATACACCAAATTGCCTaGTCGGTCATTGTCATAACCAGAGAAGTGAATTCT +
Preference number: 6 (lower is better)
Translates to: VFDVTEAIHQIA*SVIVITREVNS
Trigger: AGAATTCACTTCTCTGGTTATGACAATGACCGACCAGGCAATTTGGTGTATCGCTTCTGTGACGTCAAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280258.6
CDS CAA 72 bp AAAACTCTTCACACGTGGCAGAAGTGTTCCAACAGATaGGTGAATTCTCCTCGACTCTTCTGTGAACTCCAT +
Preference number: 6 (lower is better)
Translates to: KTLHTWQKCSNR*VNSPRLFCELH
Trigger: ATGGAGTTCACAGAAGAGTCGAGGAGAATTCACCAATCTGTTGGAACACTTCTGCCACGTGTGAAGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533902.2
CDS TCA 72 bp TTTTATCAGCAAGGTCTTGATGACCTGTATCTTGGCTaGCCTCCTATCTCATCCTGTGACTTAGAATGCCTA +
Preference number: 6 (lower is better)
Translates to: FYQQGLDDLYLG*PPISSCDLECL
Trigger: TAGGCATTCTAAGTCACAGGATGAGATAGGAGGTCAGCCAAGATACAGGTCATCAAGACCTTGCTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp ATCACACCTGCTCCTGTAAATGATGTTTGTCCTAAGTaGCTACATATACCTAAGGCAGCACCAAGTAGTAGA +
Preference number: 6 (lower is better)
Translates to: ITPAPVNDVCPK*LHIPKAAPSSR
Trigger: TCTACTACTTGGTGCTGCCTTAGGTATATGTAGCCACTTAGGACAAACATCATTTACAGGAGCAGGTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 72 bp AGAATCCTAAAGATAAGCTCCTGGGCTGAGTTGTTTTaGCCTTTGCCGTCCACAGCACTTTTCTCTTATGAT +
Preference number: 6 (lower is better)
Translates to: RILKISSWAELF*PLPSTALFSYD
Trigger: ATCATAAGAGAAAAGTGCTGTGGACGGCAAAGGCAAAAACAACTCAGCCCAGGAGCTTATCTTTAGGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 72 bp GGCTTCTTTACTGCAACCTATTTTATCAGCAAGGTCTaGATGACCTGTATCTTGGCTGACCTCCTATCTCAT +
Preference number: 6 (lower is better)
Translates to: GFFTATYFISKV*MTCILADLLSH
Trigger: ATGAGATAGGAGGTCAGCCAAGATACAGGTCATCAAGACCTTGCTGATAAAATAGGTTGCAGTAAAGAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 90 bp ATTAGGGCACATGTACTGGTCCCAGTTTGCAATTTCAAAAGAGGCTaGCATCCTAAGAGGCTTTTGGACATGTTCCATTTATGCAGCATT +
Preference number: 6 (lower is better)
Translates to: IRAHVLVPVCNFKRG*HPKRLLDMFHLCSI
Trigger: AATGCTGCATAAATGGAACATGTCCAAAAGCCTCTTAGGATGCAAGCCTCTTTTGAAATTGCAAACTGGGACCAGTACATGTGCCCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 72 bp TTGTACCCAGTAGGTCGTTTATGTAGGTGTGTTACCTaGTATCCTCTGAACCTTCTTCTCTTACTACTGTTG +
Preference number: 6 (lower is better)
Translates to: LYPVGRLCRCVT*YPLNLLLLLLL
Trigger: CAACAGTAGTAAGAGAAGAAGGTTCAGAGGATACAAGGTAACACACCTACATAAACGACCTACTGGGTACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531521.1
CDS CAA 72 bp CATGTACTGGTCCCAGTTTGCAATTTCAAAAGAGGCTaGCATCCTAAGAGGCTTTTGGACATGTTCCATTTA +
Preference number: 6 (lower is better)
Translates to: HVLVPVCNFKRG*HPKRLLDMFHL
Trigger: TAAATGGAACATGTCCAAAAGCCTCTTAGGATGCAAGCCTCTTTTGAAATTGCAAACTGGGACCAGTACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS GCA 72 bp ATGTACTGGTCCCAGTTTGCAATTTCAAAAGAGGCTTaGATCCTAAGAGGCTTTTGGACATGTTCCATTTAT +
Preference number: 6 (lower is better)
Translates to: MYWSQFAISKEA*ILRGFWTCSIY
Trigger: ATAAATGGAACATGTCCAAAAGCCTCTTAGGATGCAAGCCTCTTTTGAAATTGCAAACTGGGACCAGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp GTGTCAGCAATGAAAACAGACTCTAGAGAACATAAATaGAAGGAAATGTATTGGAGTGGTTGGAGAGTAAAG +
Preference number: 6 (lower is better)
Translates to: VSAMKTDSREHK*KEMYWSGWRVK
Trigger: CTTTACTCTCCAACCACTCCAATACATTTCCTTCCATTTATGTTCTCTAGAGTCTGTTTTCATTGCTGACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 72 bp GAGAGTATGGGTTTGAGTTTTGGCTCTCATGATGATTaGCTGTACAAACATACATCTGTTATTTCAAGTCCC +
Preference number: 6 (lower is better)
Translates to: ESMGLSFGSHDD*LYKHTSVISSP
Trigger: GGGACTTGAAATAACAGATGTATGTTTGTACAGCAAATCATCATGAGAGCCAAAACTCAAACCCATACTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 90 bp GTCCCAGTTTGCAATTTCAAAAGAGGCTTGCATCCTAAGAGGCTTTaGGACATGTTCCATTTATGCAGCATTAATGTTCTAAATGTTCTA +
Preference number: 6 (lower is better)
Translates to: VPVCNFKRGLHPKRL*DMFHLCSINVLNVL
Trigger: TAGAACATTTAGAACATTAATGCTGCATAAATGGAACATGTCCAAAAGCCTCTTAGGATGCAAGCCTCTTTTGAAATTGCAAACTGGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CCA 72 bp GGGGTAATTACCAACAGTTGGGGTAATTACAACATTTaGGGTAACAGTATGTGTTTAGTAATTGGTAATGGA +
Preference number: 6 (lower is better)
Translates to: GVITNSWGNYNI*GNSMCLVIGNG
Trigger: TCCATTACCAATTACTAAACACATACTGTTACCCCAAATGTTGTAATTACCCCAACTGTTGGTAATTACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS TCA 72 bp GAAGGCTTCTGGTTGCCTATTTTTATGGTTATTTCTTaGTTATATGCTAAACAAGGGGTGGATTATTCATGC +
Preference number: 6 (lower is better)
Translates to: EGFWLPIFMVIS*LYAKQGVDYSC
Trigger: GCATGAATAATCCACCCCTTGTTTAGCATATAATCAAGAAATAACCATAAAAATAGGCAACCAGAAGCCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532572.1
CDS CAA 72 bp CCCTTGGAGCTGTTAAACACAATCACACAATCTTTATaGCTTGCTGAATTGCAATTATCAGATTATATAGGA +
Preference number: 6 (lower is better)
Translates to: PLELLNTITQSL*LAELQLSDYIG
Trigger: TCCTATATAATCTGATAATTGCAATTCAGCAAGCAATAAAGATTGTGTGATTGTGTTTAACAGCTCCAAGGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532572.1