RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRSS21 (Homo sapiens)

Ensembl gene IDs: ENSG00000007038

Ensembl transcript IDs: ENST00000005995.8, ENST00000450020.7, ENST00000570594.5, ENST00000570629.5, ENST00000571141.1, ENST00000574265.1, ENST00000574813.5, ENST00000575739.1, ENST00000634351.2, ENST00000634454.1, ENST00000634525.1, ENST00000634698.1, ENST00000634924.1, ENST00000635038.1, ENST00000635090.1, ENST00000635401.1

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGTGGTGGCAAGGACACTCACGAAGCAGGCATCCTTCCCGCCTTaGGCATTGCCAGCACAAACCATGTCTCCAAAGATGTCCTTGCGG +
Preference number: 1 (lower is better)
Translates to: GVVARTLTKQASFPP*ALPAQTMSPKMSLR
Trigger: CCGCAAGGACATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGCCACCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR CCA 90 bp TTTCTGCATCTGCAGAGTGGGGCAACAGTCTCCACCTCCCGGGGTTaGCATGAGGGTCAAATAAGGCACAGGGACACAGGATGCTTTCCT +
Preference number: 1 (lower is better)
Translates to: FLHLQSGATVSTSRG*HEGQIRHRDTGCFP
Trigger: AGGAAAGCATCCTGTGTCCCTGTGCCTTATTTGACCCTCATGCCAACCCCGGGAGGTGGAGACTGTTGCCCCACTCTGCAGATGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR GCA 90 bp TGGCAAGGACACTCACGAAGCAGGCATCCTTCCCGCCTTGGGCATTaGCAGCACAAACCATGTCTCCAAAGATGTCCTTGCGGAAACTGT +
Preference number: 1 (lower is better)
Translates to: WQGHSRSRHPSRLGH*QHKPCLQRCPCGNC
Trigger: ACAGTTTCCGCAAGGACATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR TCA 90 bp GTAGGTGACAGGTGCAGACAGCTTCACCAAGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGGGCTCAGATAGATATTCGATACGAA +
Preference number: 1 (lower is better)
Translates to: VGDRCRQLHQGNVIG*IPQVARAQIDIRYE
Trigger: TTCGTATCGAATATCTATCTGAGCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGTCTGCACCTGTCACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
3UTR-3UTR CCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGAGACACCGGGCCGATTaGGCCGACCACAGCCCACTC +
Preference number: 2 (lower is better)
Translates to: PLWAISFWIHSKWWLILVRHRAD*ADHSPL
Trigger: GAGTGGGCTGTGGTCGGCCCAATCGGCCCGGTGTCT...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
3UTR CAA 90 bp GGGAGTGGTGGCAAGGACACTCACGAAGCAGGCATCCTTCCCGCCTaGGGCATTGCCAGCACAAACCATGTCTCCAAAGATGTCCTTGCG +
Preference number: 2 (lower is better)
Translates to: GSGGKDTHEAGILPA*GIASTNHVSKDVLA
Trigger: CGCAAGGACATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGCCACCACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR-3UTR TCA 90 bp CGTTTCTGCATCTGCAGAGTGGGGCAACAGTCTCCACCTCCCGGGGTTGGCATGTTCCCTCATCCTCTTTaGTGTACCCCCAGCCAGTCA +
Preference number: 2 (lower is better)
Translates to: RFCICRVGQQSPPPGVGMFPHPL*CTPSQS
Trigger: TGACTGGCTGGGGGTACATCAAAGAGGATGAGGGAA...CATGCCAACCCCGGGAGGTGGAGACTGTTGCCCCACTCTGCAGATGCAGAAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR-3UTR TCA 90 bp AGGCATCCTTCCCGCCTTGGGCATTGCCAGCACAAACCATGTCTCCAAAGATGTGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGG +
Preference number: 2 (lower is better)
Translates to: RHPSRLGHCQHKPCLQRCGNVIG*IPQVAR
Trigger: CCTCGCTACCTGGGGAATTCACCCTATGACATTGCC...ACATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR-3UTR TCA 90 bp AGTCACCCAGCAGTCTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGG +
Preference number: 2 (lower is better)
Translates to: SHPAVCPVLKLKCGGLETGNVIG*IPQVAR
Trigger: CCTCGCTACCTGGGGAATTCACCCTATGACATTGCC...TGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAGACTGCTGGGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
3UTR-3UTR GCA 90 bp GCAGTCTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGAGTGTAGGTGACAGGTaGAGACAGCTTCACCAAGGC +
Preference number: 2 (lower is better)
Translates to: AVCPVLKLKCGGLETDGLSVGDR*RQLHQG
Trigger: GCCTTGGTGAAGCTGTCTGCACCTGTCACCTACACT...CAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
3UTR-3UTR GCA 90 bp GTGCAGACAGCTTCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGAGTGTAGGTGACAGGTaGAGACAGCTTCACCAAGGC +
Preference number: 2 (lower is better)
Translates to: VQTASPRQCHRVNSPGSESVGDR*RQLHQG
Trigger: GCCTTGGTGAAGCTGTCTGCACCTGTCACCTACACT...CTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
3UTR-3UTR TCA 90 bp AGGCATCCTTCCCGCCTTGGGCATTGCCAGCACAAACCATGTCTCCAAAGATGTTGCGGAAACTGTACTTaGGGAAGAGGTGGTTGCACA +
Preference number: 2 (lower is better)
Translates to: RHPSRLGHCQHKPCLQRCCGNCT*GRGGCT
Trigger: TGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCA...ACATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR-3UTR CCA 90 bp CCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACGGCCTGACTTGGCAGTaGCCCCAGGCTGCATGGGCT +
Preference number: 2 (lower is better)
Translates to: PCKASTGMCLLPNKTEENGLTWQ*PQAAWA
Trigger: AGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCC...GTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
3UTR-3UTR CCA 90 bp GAATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGGGCCTGACTTGGCAGTaGCCCCAGGCTGCATGGGCT +
Preference number: 2 (lower is better)
Translates to: ECPARHQLECVYYQTRQKGLTWQ*PQAAWA
Trigger: AGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCC...CTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
3UTR-3UTR CCA 90 bp TCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGTCAGCTGGCCAAACTaGACCATCCACCCGGAGGGA +
Preference number: 2 (lower is better)
Translates to: SPKMSLRKLYLRKRWLHIVSWPN*TIHPEG
Trigger: TCCCTCCGGGTGGATGGTCCAGTTTGGCCAGCTGAC...TATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR CAA 90 bp CCGCCTTGGGCATTGCCAGCACAAACCATGTCTCCAAAGATGTCCTaGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGAGTTG +
Preference number: 2 (lower is better)
Translates to: PPWALPAQTMSPKMS*RKLYLRKRWLHIEL
Trigger: CAACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR-3UTR TCA 90 bp ACCCATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGG +
Preference number: 2 (lower is better)
Translates to: THVSKDVLAETVLEEEVVGNVIG*IPQVAR
Trigger: CCTCGCTACCTGGGGAATTCACCCTATGACATTGCC...AACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
3UTR-3UTR TCA 90 bp AAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGAGTTGGTGCCTCATCCTCTTTaGTGTACCCCCAGCCAGTCA +
Preference number: 2 (lower is better)
Translates to: KMSLRKLYLRKRWLHIELVPHPL*CTPSQS
Trigger: TGACTGGCTGGGGGTACATCAAAGAGGATGAGGCAC...CAACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
3UTR-3UTR TCA 90 bp ACCCATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTTTTATGATGGCGACCTaGACTTCCTGGAGGGTGTGG +
Preference number: 2 (lower is better)
Translates to: THVSKDVLAETVLEEEVVFMMAT*TSWRVW
Trigger: CCACACCCTCCAGGAAGTTCAGGTCGCCATCATAAA...AACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
3UTR-3UTR GCA 90 bp ACCCATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTAGTGTAGGTGACAGGTaGAGACAGCTTCACCAAGGC +
Preference number: 2 (lower is better)
Translates to: THVSKDVLAETVLEEEVVSVGDR*RQLHQG
Trigger: GCCTTGGTGAAGCTGTCTGCACCTGTCACCTACACT...AACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
3UTR-3UTR CCA 90 bp AAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGAGTTACTTCCTGGAGGGTGTaGGGAGATGGCAGTGCCTCA +
Preference number: 2 (lower is better)
Translates to: KDVLAETVLEEEVVAHRVTSWRV*GDGSAS
Trigger: TGAGGCACTGCCATCTCCCCACACCCTCCAGGAAGT...AACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
3UTR CAA 90 bp CCTGAGTCACCCATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTaGAGGAAGAGGTGGTTGCACATAGAGTTGTTTATGATGGCGACC +
Preference number: 2 (lower is better)
Translates to: PESPMSPKMSLRKLY*RKRWLHIELFMMAT
Trigger: GGTCGCCATCATAAACAACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATGGGTGACTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
3UTR CAA 90 bp CCAGCACAAACCATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTaGAGGAAGAGGTGGTTGCACATAGAGTTGTTTATGATGGCGACC +
Preference number: 2 (lower is better)
Translates to: PAQTMSPKMSLRKLY*RKRWLHIELFMMAT
Trigger: GGTCGCCATCATAAACAACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATGGTTTGTGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR-3UTR GCA 90 bp TCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGAGTTGTTTATGAGTGTAGGTGACAGGTaGAGACAGCTTCACCAAGGC +
Preference number: 2 (lower is better)
Translates to: SLRKLYLRKRWLHIELFMSVGDR*RQLHQG
Trigger: GCCTTGGTGAAGCTGTCTGCACCTGTCACCTACACT...CATAAACAACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
3UTR-3UTR GCA 90 bp AAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGAGTTGTGGGGAGATGGCAGTaGCTCATCCTCTTTGATGTA +
Preference number: 2 (lower is better)
Translates to: KDVLAETVLEEEVVAHRVVGRWQ*LILFDV
Trigger: TACATCAAAGAGGATGAGGCACTGCCATCTCCCCAC...AACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
3UTR CCA 72 bp ACAGGGACACAGGATGCTTTCCTGGGCTGGGAGTGGTaGCAAGGACACTCACGAAGCAGGCATCCTTCCCGC +
Preference number: 3 (lower is better)
Translates to: TGTQDAFLGWEW*QGHSRSRHPSR
Trigger: GCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGCCACCACTCCCAGCCCAGGAAAGCATCCTGTGTCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR GCA 72 bp AAAAGAGTAGCGGCCAGGAGGGGTCTGGCTGGGACATaGCACTCTGGGCCATCAGCTTCTGGATCCACTCAA +
Preference number: 3 (lower is better)
Translates to: KRVAARRGLAGT*HSGPSASGSTQ
Trigger: TTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGGCATGTCCCAGCCAGACCCCTCCTGGCCGCTACTCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
3UTR TCA 72 bp GTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTaGCTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGG +
Preference number: 3 (lower is better)
Translates to: VYYQTRQKRTRA*LGSGPRLHGLR
Trigger: CCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
3UTR GCA 72 bp CACTCACGAAGCAGGCATCCTTCCCGCCTTGGGCATTaGCAGCACAAACCATGTCTCCAAAGATGTCCTTGC +
Preference number: 3 (lower is better)
Translates to: HSRSRHPSRLGH*QHKPCLQRCPC
Trigger: GCAAGGACATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR CCA 72 bp GCAAGGACACTCACGAAGCAGGCATCCTTCCCGCCTTaGGCATTGCCAGCACAAACCATGTCTCCAAAGATG +
Preference number: 3 (lower is better)
Translates to: ARTLTKQASFPP*ALPAQTMSPKM
Trigger: CATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR-3UTR CAA 90 bp GTCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGTGCCTCATCCTCTTaGATGTACCCCCAGCCAGTC +
Preference number: 3 (lower is better)
Translates to: VSKDVLAETVLEEEVVAHSASSS*MYPQPV
Trigger: GACTGGCTGGGGGTACATCAAAGAGGATGAGGCACT...ATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
3UTR-3UTR CAA 90 bp ACACTCACGAAGCAGGCATCCTTCCCGCCTTGGGCATTGCCAGCACAAACCATGTTGAGGAAGAGGTGGTaGCACATAGAGTTGTTTATG +
Preference number: 3 (lower is better)
Translates to: TLTKQASFPPWALPAQTMLRKRW*HIELFM
Trigger: CATAAACAACTCTATGTGCAACCACCTCTTCCTCAA...CATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGTGAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR TCA 72 bp AGGTGCAGACAGCTTCACCAAGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGGGCTCAGATAGATATT +
Preference number: 3 (lower is better)
Translates to: RCRQLHQGNVIG*IPQVARAQIDI
Trigger: AATATCTATCTGAGCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGTCTGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR GCA 90 bp GAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGGCGTGCGCCGCCGTGAGTaGCCAGCGGTGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: ENQGLTWQWPQAAWAQVGVRRRE*PAVAEQ
Trigger: CTGCTCAGCCACCGCTGGGCACTCACGGCGGCGCAC...GCCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp GAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAAGGCGCAGGCTCCCCTaGCACGGCCAACGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: EENQGLTWQWPQAAWAQVRRRLP*HGQRPS
Trigger: ACTCGGGCGTTGGCCGTGGCAGGGGAGCCTGCGCCT...TACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR GCA 90 bp CAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCGTGCGCCGCCGTGAGTaGCCAGCGGTGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QDRREPGPDLAVAPGCMGVRRRE*PAVAEQ
Trigger: CTGCTCAGCCACCGCTGGGCACTCACGGCGGCGCAC...GCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp GAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGGCGGCCAAGGGTCCACCTaGGTCACCGAAGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: ENQGLTWQWPQAAWAQVGGQGST*VTEAGI
Trigger: GATGCCTGCTTCGGTGACTCAGGTGGACCCTTGGCC...GCCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000634351.2
ENST00000635090.1
CDS-3UTR GCA 90 bp TTCTGCATCTGCAGAGTGGGGCAACAGTCTCCACCTCCCGGGGTTGGCATGAGGGTGCGCCGCCGTGAGTaGCCAGCGGTGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FCICRVGQQSPPPGVGMRVRRRE*PAVAEQ
Trigger: CTGCTCAGCCACCGCTGGGCACTCACGGCGGCGCAC...CCTCATGCCAACCCCGGGAGGTGGAGACTGTTGCCCCACTCTGCAGATGCAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CCA 90 bp AGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGGAGACACCGGGCCGATTaGGCCGACCACAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: REPGPDLAVAPGCMGSGRRHRAD*ADHSPL
Trigger: GAGTGGGCTGTGGTCGGCCCAATCGGCCCGGTGTCT...CCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp ACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGCAGTGGCCCCAGGCTaGATGGGCTCAGGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: TEENQGLTWQWPQAAWAQAVAPG*MGSGRL
Trigger: GAGCCTACCTGAGCCCATGCAGCCTGGGGCCACTGC...CTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp AGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTGCAGTGGCCCCAGGCTaGATGGGCTCAGGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: RREPGPDLAVAPGCMGSGAVAPG*MGSGRL
Trigger: GAGCCTACCTGAGCCCATGCAGCCTGGGGCCACTGC...ACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp GAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGGCGTCAGCTGGCCAAACTaGACCATCCACCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: ENQGLTWQWPQAAWAQVGVSWPN*TIHPEG
Trigger: TCCCTCCGGGTGGATGGTCCAGTTTGGCCAGCTGAC...GCCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp GACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGCCTGACTTGGCAGTaGCCCCAGGCTGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: DRREPGPDLAVAPGCMGSGLTWQ*PQAAWA
Trigger: AGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCC...TGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp AGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTGGCCTGACTTGGCAGTaGCCCCAGGCTGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: RREPGPDLAVAPGCMGSGGLTWQ*PQAAWA
Trigger: AGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCC...ACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp CAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCGGCCTGACTTGGCAGTaGCCCCAGGCTGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: QDRREPGPDLAVAPGCMGGLTWQ*PQAAWA
Trigger: AGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCC...GCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp GAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAAAGAGAACCAGGGCCTaGCTTGGCAGTGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: EENQGLTWQWPQAAWAQVKRTRA*LGSGPR
Trigger: CCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTT...TACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp AGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTTGGCCCCAGGCTGCATaGGCTCAGGTAGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RREPGPDLAVAPGCMGSGWPQAA*AQVGSD
Trigger: GTCTGAGCCTACCTGAGCCCATGCAGCCTGGGGCCA...ACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp CCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCAGTGCCCAGCGGTGGCTaGGCAGGCTCACTCCGCATA +
Preference number: 4 (lower is better)
Translates to: PNKTEENQGLTWQWPQAAVPSGG*AGSLRI
Trigger: TATGCGGAGTGAGCCTGCTCAGCCACCGCTGGGCAC...TGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp GCAGTCTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGGTGCGCCGCCGTGAGTaGCCAGCGGTGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: AVCPVLKLKCGGLETDGLVRRRE*PAVAEQ
Trigger: CTGCTCAGCCACCGCTGGGCACTCACGGCGGCGCAC...CAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAGACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR GCA 90 bp AACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCAGTGGCCCCAGGCTaGATGGGCTCAGGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: NKTEENQGLTWQWPQAAWAVAPG*MGSGRL
Trigger: GAGCCTACCTGAGCCCATGCAGCCTGGGGCCACTGC...CCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp GAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGTCAGCTGGCCAAACTaGACCATCCACCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EENQGLTWQWPQAAWAQVVSWPN*TIHPEG
Trigger: TCCCTCCGGGTGGATGGTCCAGTTTGGCCAGCTGAC...TACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp GAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGGCTGGGACATGCCACTCTaGGCCATCAGCTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: ENQGLTWQWPQAAWAQVGWDMPL*AISFWI
Trigger: GATCCAGAAGCTGATGGCCCAGAGTGGCATGTCCCA...GCCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp CCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCACGGCCAGGAGGGGTCTaGCTGGGACATGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: PNKTEENQGLTWQWPQAARPGGV*LGHATL
Trigger: CAGAGTGGCATGTCCCAGCCAGACCCCTCCTGGCCG...TGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp ACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCGGCCTGACTTGGCAGTaGCCCCAGGCTGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: TKQDRREPGPDLAVAPGCGLTWQ*PQAAWA
Trigger: AGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCC...GCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp AGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGGGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGG +
Preference number: 4 (lower is better)
Translates to: REPGPDLAVAPGCMGSGRGNVIG*IPQVAR
Trigger: CCTCGCTACCTGGGGAATTCACCCTATGACATTGCC...CCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp ACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCGGCCAAGGGTCCACCTaGGTCACCGAAGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: TKQDRREPGPDLAVAPGCGQGST*VTEAGI
Trigger: GATGCCTGCTTCGGTGACTCAGGTGGACCCTTGGCC...GCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000634351.2
ENST00000635090.1
CDS-3UTR TCA 90 bp CCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCAAAGAGAACCAGGGCCTaGCTTGGCAGTGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PNKTEENQGLTWQWPQAAKRTRA*LGSGPR
Trigger: CCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTT...TGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGAGGCGCAGGCTCCCCTaGCACGGCCAACGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVRRRLP*HGQRPS
Trigger: ACTCGGGCGTTGGCCGTGGCAGGGGAGCCTGCGCCT...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR GCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGGTGCGCCGCCGTGAGTaGCCAGCGGTGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVVRRRE*PAVAEQ
Trigger: CTGCTCAGCCACCGCTGGGCACTCACGGCGGCGCAC...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR GCA 90 bp ACAGCTTCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGGGCTCAGTGCGCCGCCGTGAGTaGCCAGCGGTGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: TASPRQCHRVNSPGSEGSVRRRE*PAVAEQ
Trigger: CTGCTCAGCCACCGCTGGGCACTCACGGCGGCGCAC...TGAGCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR GCA 90 bp AGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGGTCCCGCCTTGGGCATTaGCAGCACAAACCATGTCTC +
Preference number: 4 (lower is better)
Translates to: REPGPDLAVAPGCMGSGRSRLGH*QHKPCL
Trigger: GAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGA...CCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000634351.2
ENST00000635090.1
CDS-3UTR CCA 90 bp AAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCTCACTCCGCATACGTaGGAATCCCACAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: KTEENQGLTWQWPQAAWALTPHT*ESHRRR
Trigger: CCTGCGCCTGTGGGATTCCCACGTATGCGGAGTGAG...AGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp GACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAACTTCCTGGAGGGTGTaGGGAGATGGCAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: DRREPGPDLAVAPGCMGSTSWRV*GDGSAS
Trigger: TGAGGCACTGCCATCTCCCCACACCCTCCAGGAAGT...TGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp TGGGCTGGGAGTGGTGGCAAGGACACTCACGAAGCAGGCATCCTTCCCGCCTTGGCATCCTTCCCGCCTTaGGCATTGCCAGCACAAACC +
Preference number: 4 (lower is better)
Translates to: WAGSGGKDTHEAGILPALASFPP*ALPAQT
Trigger: GGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGC...CAAGGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGCCACCACTCCCAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR TCA 90 bp CTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGGATGTGCGACTCCGGCTTCCTaGGTCCAGCCCGAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSGSQTQMWRPGDRWAGCATPAS*VQPEPA
Trigger: TGCTGGCTCGGGCTGGACTCAGGAAGCCGGAGTCGC...ACATCCAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR TCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGGCGACTCCGGCTTCCTaGGTCCAGCCCGAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVATPAS*VQPEPA
Trigger: TGCTGGCTCGGGCTGGACTCAGGAAGCCGGAGTCGC...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR TCA 90 bp CAGACAGCTTCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGGGCGTGCCCAGCGGTGGCTaGGCAGGCTCACTCCGCATA +
Preference number: 4 (lower is better)
Translates to: QTASPRQCHRVNSPGSEGVPSGG*AGSLRI
Trigger: TATGCGGAGTGAGCCTGCTCAGCCACCGCTGGGCAC...GCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR TCA 90 bp CAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGG +
Preference number: 4 (lower is better)
Translates to: QDRREPGPDLAVAPGCMGGNVIG*IPQVAR
Trigger: CCTCGCTACCTGGGGAATTCACCCTATGACATTGCC...GCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp TCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGGGCTCAGATAGAAGGCGCAGGCTCCCCTaGCACGGCCAACGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: SPRQCHRVNSPGSEGSDRRRRLP*HGQRPS
Trigger: ACTCGGGCGTTGGCCGTGGCAGGGGAGCCTGCGCCT...TCTATCTGAGCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CCA 90 bp CAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCGAGGGTGTGGGGAGATaGCAGTGCCTCATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QDRREPGPDLAVAPGCMGEGVGR*QCLILF
Trigger: AAAGAGGATGAGGCACTGCCATCTCCCCACACCCTC...GCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp AAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTGCATCCTTCCCGCCTTaGGCATTGCCAGCACAAACC +
Preference number: 4 (lower is better)
Translates to: KTEENQGLTWQWPQAAWAASFPP*ALPAQT
Trigger: GGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGC...AGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000634351.2
ENST00000635090.1
CDS-3UTR CCA 90 bp TTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTAGACACCGGGCCGATTaGGCCGACCACAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: LPNKTEENQGLTWQWPQARHRAD*ADHSPL
Trigger: GAGTGGGCTGTGGTCGGCCCAATCGGCCCGGTGTCT...AGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp GACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCATGGGACATGCCACTCTaGGCCATCAGCTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: DRREPGPDLAVAPGCMGSWDMPL*AISFWI
Trigger: GATCCAGAAGCTGATGGCCCAGAGTGGCATGTCCCA...TGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp TGGCAAGGACACTCACGAAGCAGGCATCCTTCCCGCCTTGGGCATTGCCAGCACTTCCTGGGCTGGGAGTaGTGGCAAGGACACTCACGA +
Preference number: 4 (lower is better)
Translates to: WQGHSRSRHPSRLGHCQHFLGWE*WQGHSR
Trigger: TCGTGAGTGTCCTTGCCACCACTCCCAGCCCAGGAA...GTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CCA 90 bp TGGGCTGGGAGTGGTGGCAAGGACACTCACGAAGCAGGCATCCTTCCCGCCTTGTCTGCATCTGCAGAGTaGGGCAACAGTCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: WAGSGGKDTHEAGILPALSASAE*GNSLHL
Trigger: GAGGTGGAGACTGTTGCCCCACTCTGCAGATGCAGA...CAAGGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGCCACCACTCCCAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR TCA 90 bp CTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGGATGTGTGCCCAGCGGTGGCTaGGCAGGCTCACTCCGCATA +
Preference number: 4 (lower is better)
Translates to: LSGSQTQMWRPGDRWAGCVPSGG*AGSLRI
Trigger: TATGCGGAGTGAGCCTGCTCAGCCACCGCTGGGCAC...ACATCCAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR TCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGGTGCCCAGCGGTGGCTaGGCAGGCTCACTCCGCATA +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVVPSGG*AGSLRI
Trigger: TATGCGGAGTGAGCCTGCTCAGCCACCGCTGGGCAC...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR TCA 90 bp TTCTGCATCTGCAGAGTGGGGCAACAGTCTCCACCTCCCGGGGTTGGCATGAGGGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGG +
Preference number: 4 (lower is better)
Translates to: FCICRVGQQSPPPGVGMRGNVIG*IPQVAR
Trigger: CCTCGCTACCTGGGGAATTCACCCTATGACATTGCC...CCTCATGCCAACCCCGGGAGGTGGAGACTGTTGCCCCACTCTGCAGATGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR TCA 90 bp AAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTGTGCCTCATCCTCTTTaGTGTACCCCCAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: KTEENQGLTWQWPQAAWAVPHPL*CTPSQS
Trigger: TGACTGGCTGGGGGTACATCAAAGAGGATGAGGCAC...AGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp ACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGTTTATGATGGCGACCTaGACTTCCTGGAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TEENQGLTWQWPQAAWAQFMMAT*TSWRVW
Trigger: CCACACCCTCCAGGAAGTTCAGGTCGCCATCATAAA...CTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp GTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCAGGCGCAGGCTCCCCTaGCACGGCCAACGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: VFITKQDRREPGPDLAVARRRLP*HGQRPS
Trigger: ACTCGGGCGTTGGCCGTGGCAGGGGAGCCTGCGCCT...GGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR GCA 90 bp GTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCGTGCGCCGCCGTGAGTaGCCAGCGGTGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VFITKQDRREPGPDLAVAVRRRE*PAVAEQ
Trigger: CTGCTCAGCCACCGCTGGGCACTCACGGCGGCGCAC...GGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp GTCACCCATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTGCGCCGCCGTGAGTaGCCAGCGGTGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VTHVSKDVLAETVLEEEVVRRRE*PAVAEQ
Trigger: CTGCTCAGCCACCGCTGGGCACTCACGGCGGCGCAC...CACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATGGGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR GCA 90 bp CAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCAGTGTAGGTGACAGGTaGAGACAGCTTCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: QDRREPGPDLAVAPGCMGSVGDR*RQLHQG
Trigger: GCCTTGGTGAAGCTGTCTGCACCTGTCACCTACACT...GCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp TGGCAAGGACACTCACGAAGCAGGCATCCTTCCCGCCTTGGGCATTGCCAGCACCCAAGCCTCCGTTTCTaGATCTGCAGAGTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: WQGHSRSRHPSRLGHCQHPSLRF*ICRVGQ
Trigger: TTGCCCCACTCTGCAGATGCAGAAACGGAGGCTTGG...GTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CCA 90 bp CAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTGGGCCATCAGCTTCTaGATCCACTCAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QDRREPGPDLAVAPGCMGWAISF*IHSKWW
Trigger: CCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCA...GCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp AGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTTGGGCCATCAGCTTCTaGATCCACTCAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RREPGPDLAVAPGCMGSGWAISF*IHSKWW
Trigger: CCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCA...ACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGCGGCCAGGAGGGGTCTaGCTGGGACATGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVRPGGV*LGHATL
Trigger: CAGAGTGGCATGTCCCAGCCAGACCCCTCCTGGCCG...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR CCA 90 bp ATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGGCCCCAGGCTGCATaGGCTCAGGTAGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: ITKQDRREPGPDLAVAPGWPQAA*AQVGSD
Trigger: GTCTGAGCCTACCTGAGCCCATGCAGCCTGGGGCCA...GCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp GGTAGCGAGGGCTCAGATAGATATTCGATACGAAGTAACGGGTGTAGTAGGCGTGCGACTCCGGCTTCCTaGGTCCAGCCCGAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSEGSDRYSIRSNGCSRRATPAS*VQPEPA
Trigger: TGCTGGCTCGGGCTGGACTCAGGAAGCCGGAGTCGC...ACGCCTACTACACCCGTTACTTCGTATCGAATATCTATCTGAGCCCTCGCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR TCA 90 bp CCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCAGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGG +
Preference number: 4 (lower is better)
Translates to: PNKTEENQGLTWQWPQAAGNVIG*IPQVAR
Trigger: CCTCGCTACCTGGGGAATTCACCCTATGACATTGCC...TGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp ACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCGTGCCTCATCCTCTTTaGTGTACCCCCAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: TKQDRREPGPDLAVAPGCVPHPL*CTPSQS
Trigger: TGACTGGCTGGGGGTACATCAAAGAGGATGAGGCAC...GCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp GAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTATGCGGAAACTGTACTTaGGGAAGAGGTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: EENQGLTWQWPQAAWAQVCGNCT*GRGGCT
Trigger: TGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCA...TACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp GACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCATGCGGAAACTGTACTTaGGGAAGAGGTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: DRREPGPDLAVAPGCMGSCGNCT*GRGGCT
Trigger: TGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCA...TGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp ACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGTGCGGAAACTGTACTTaGGGAAGAGGTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: TEENQGLTWQWPQAAWAQCGNCT*GRGGCT
Trigger: TGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCA...CTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp CAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTGCGGAAACTGTACTTaGGGAAGAGGTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: QDRREPGPDLAVAPGCMGCGNCT*GRGGCT
Trigger: TGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCA...GCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGGGCCAAGGGTCCACCTaGGTCACCGAAGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVGQGST*VTEAGI
Trigger: GATGCCTGCTTCGGTGACTCAGGTGGACCCTTGGCC...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR TCA 90 bp GACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAACTCAAAGTGGTGGCTaGTATTGGTGTAGACACCGG +
Preference number: 4 (lower is better)
Translates to: DRREPGPDLAVAPGCMGSTQSGG*YWCRHR
Trigger: CCGGTGTCTACACCAATATCAGCCACCACTTTGAGT...TGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp AGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTACTCAAAGTGGTGGCTaGTATTGGTGTAGACACCGG +
Preference number: 4 (lower is better)
Translates to: RREPGPDLAVAPGCMGSGTQSGG*YWCRHR
Trigger: CCGGTGTCTACACCAATATCAGCCACCACTTTGAGT...ACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp CATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCAAGGCGCAGGCTCCCCTaGCACGGCCAACGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: HVSKDVLAETVLEEEVVARRRLP*HGQRPS
Trigger: ACTCGGGCGTTGGCCGTGGCAGGGGAGCCTGCGCCT...TGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR GCA 90 bp AAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTAGTGTAGGTGACAGGTaGAGACAGCTTCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: KTEENQGLTWQWPQAAWASVGDR*RQLHQG
Trigger: GCCTTGGTGAAGCTGTCTGCACCTGTCACCTACACT...AGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp AGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGGTCTCAAACTCAAATGTaGAGGCCTGGAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: REPGPDLAVAPGCMGSGRSQTQM*RPGDRW
Trigger: CCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGA...CCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp AAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGACTTCCTGGAGGGTGTaGGGAGATGGCAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: KQDRREPGPDLAVAPGCMTSWRV*GDGSAS
Trigger: TGAGGCACTGCCATCTCCCCACACCCTCCAGGAAGT...CATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp TTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGAGACACCGGGCCGATTaGGCCGACCACAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: LLPNKTEENQGLTWQWPQRHRAD*ADHSPL
Trigger: GAGTGGGCTGTGGTCGGCCCAATCGGCCCGGTGTCT...CTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp TTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGCGGCCAGGAGGGGTCTaGCTGGGACATGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: LLPNKTEENQGLTWQWPQRPGGV*LGHATL
Trigger: CAGAGTGGCATGTCCCAGCCAGACCCCTCCTGGCCG...CTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp GCAAGGACACTCACGAAGCAGGCATCCTTCCCGCCTTGGGCATTGCCAGCACAATCCACCTCCCGGGGTTaGCATGAGGGTCAAATAAGG +
Preference number: 4 (lower is better)
Translates to: ARTLTKQASFPPWALPAQSTSRG*HEGQIR
Trigger: CCTTATTTGACCCTCATGCCAACCCCGGGAGGTGGA...TTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR TCA 90 bp TTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGTGCCCAGCGGTGGCTaGGCAGGCTCACTCCGCATA +
Preference number: 4 (lower is better)
Translates to: FITKQDRREPGPDLAVAPVPSGG*AGSLRI
Trigger: TATGCGGAGTGAGCCTGCTCAGCCACCGCTGGGCAC...TGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp GTGAATTCCCCAGGTAGCGAGGGCTCAGATAGATATTCGATACGAAGTAACGGGGTGCCCAGCGGTGGCTaGGCAGGCTCACTCCGCATA +
Preference number: 4 (lower is better)
Translates to: VNSPGSEGSDRYSIRSNGVPSGG*AGSLRI
Trigger: TATGCGGAGTGAGCCTGCTCAGCCACCGCTGGGCAC...CCCGTTACTTCGTATCGAATATCTATCTGAGCCCTCGCTACCTGGGGAATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR TCA 90 bp CCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATTTATGATGGCGACCTaGACTTCCTGGAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PNKTEENQGLTWQWPQAAFMMAT*TSWRVW
Trigger: CCACACCCTCCAGGAAGTTCAGGTCGCCATCATAAA...TGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp CCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCAAGTGTAGGTGACAGGTaGAGACAGCTTCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: PNKTEENQGLTWQWPQAASVGDR*RQLHQG
Trigger: GCCTTGGTGAAGCTGTCTGCACCTGTCACCTACACT...TGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp GTGCAGACAGCTTCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGCTCACTCCGCATACGTaGGAATCCCACAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VQTASPRQCHRVNSPGSELTPHT*ESHRRR
Trigger: CCTGCGCCTGTGGGATTCCCACGTATGCGGAGTGAG...CTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGTCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGGTCAGCTGGCCAAACTaGACCATCCACCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVVSWPN*TIHPEG
Trigger: TCCCTCCGGGTGGATGGTCCAGTTTGGCCAGCTGAC...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR CCA 90 bp GACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCATCTCAAACTCAAATGTaGAGGCCTGGAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: DRREPGPDLAVAPGCMGSSQTQM*RPGDRW
Trigger: CCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGA...TGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp ATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCACTTCCTGGAGGGTGTaGGGAGATGGCAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ITKQDRREPGPDLAVAPGTSWRV*GDGSAS
Trigger: TGAGGCACTGCCATCTCCCCACACCCTCCAGGAAGT...GCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp CAGACAGCTTCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGGGCGCATCCTTCCCGCCTTaGGCATTGCCAGCACAAACC +
Preference number: 4 (lower is better)
Translates to: QTASPRQCHRVNSPGSEGASFPP*ALPAQT
Trigger: GGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGC...GCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CCA 90 bp TTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCACGGCCAGGAGGGGTCTaGCTGGGACATGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: FITKQDRREPGPDLAVAPRPGGV*LGHATL
Trigger: CAGAGTGGCATGTCCCAGCCAGACCCCTCCTGGCCG...TGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp CTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGGATGTCTGGGCTGGGAGTGGTaGCAAGGACACTCACGAAGC +
Preference number: 4 (lower is better)
Translates to: LSGSQTQMWRPGDRWAGCLGWEW*QGHSRS
Trigger: GCTTCGTGAGTGTCCTTGCCACCACTCCCAGCCCAG...ACATCCAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CCA 90 bp GAAGTAACGGGTGTAGTAGGCCTGCAGGCTCCAGAAGGATGGCATGGAAGTCAGTTCCTGGGCTGGGAGTaGTGGCAAGGACACTCACGA +
Preference number: 4 (lower is better)
Translates to: EVTGVVGLQAPEGWHGSQFLGWE*WQGHSR
Trigger: TCGTGAGTGTCCTTGCCACCACTCCCAGCCCAGGAA...CTGACTTCCATGCCATCCTTCTGGAGCCTGCAGGCCTACTACACCCGTTACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR TCA 90 bp ATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGG +
Preference number: 4 (lower is better)
Translates to: ITKQDRREPGPDLAVAPGGNVIG*IPQVAR
Trigger: CCTCGCTACCTGGGGAATTCACCCTATGACATTGCC...GCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp CAGACAGCTTCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGGGCGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGG +
Preference number: 4 (lower is better)
Translates to: QTASPRQCHRVNSPGSEGGNVIG*IPQVAR
Trigger: CCTCGCTACCTGGGGAATTCACCCTATGACATTGCC...GCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR TCA 90 bp TCTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGGATGGGCCAAGGGTCCACCTaGGTCACCCATGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SVRFSNSNVEAWRQMGWMGQGST*VTHVSK
Trigger: TTTGGAGACATGGGTGACTCAGGTGGACCCTTGGCC...CATCCAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR TCA 90 bp ACAGCTTCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGGGCTCAGGCCAAGGGTCCACCTaGGTCACCCATGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: TASPRQCHRVNSPGSEGSGQGST*VTHVSK
Trigger: TTTGGAGACATGGGTGACTCAGGTGGACCCTTGGCC...TGAGCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR TCA 90 bp GGTGGCAAGGACACTCACGAAGCAGGCATCCTTCCCGCCTTGGGCATTGCCAGCTTTATGATGGCGACCTaGACTTCCCTCATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GGKDTHEAGILPALGIASFMMAT*TSLILF
Trigger: AAAGAGGATGAGGGAAGTTCAGGTCGCCATCATAAA...GCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR GCA 90 bp AATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGTGCGCCGCCGTGAGTaGCCAGCGGTGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: NVFITKQDRREPGPDLAVVRRRE*PAVAEQ
Trigger: CTGCTCAGCCACCGCTGGGCACTCACGGCGGCGCAC...CACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp TGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGCGCCGCCGTGAGTaGCCAGCGGTGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: WNVFITKQDRREPGPDLAVRRRE*PAVAEQ
Trigger: CTGCTCAGCCACCGCTGGGCACTCACGGCGGCGCAC...TGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp CAGACAGCTTCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGGGCCCAAGCCTCCGTTTCTaGATCTGCAGAGTGGGGCAA +
Preference number: 4 (lower is better)
Translates to: QTASPRQCHRVNSPGSEGPSLRF*ICRVGQ
Trigger: TTGCCCCACTCTGCAGATGCAGAAACGGAGGCTTGG...GCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CCA 90 bp TCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGGGCTCAGATAGAGTCAGCTGGCCAAACTaGACCATCCACCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SPRQCHRVNSPGSEGSDRVSWPN*TIHPEG
Trigger: TCCCTCCGGGTGGATGGTCCAGTTTGGCCAGCTGAC...TCTATCTGAGCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CCA 90 bp TTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGAGGGTGTGGGGAGATaGCAGTGCCTCATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LPNKTEENQGLTWQWPQAEGVGR*QCLILF
Trigger: AAAGAGGATGAGGCACTGCCATCTCCCCACACCCTC...AGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp CCAGTCACCCAGCAGTCTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGAGAGGGTGTGGGGAGATaGCAGTGCCTCATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PVTQQSVRFSNSNVEAWREGVGR*QCLILF
Trigger: AAAGAGGATGAGGCACTGCCATCTCCCCACACCCTC...TCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAGACTGCTGGGTGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR CCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGGCATCCTTCCCGCCTTaGGCATTGCCAGCACAAACC +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVASFPP*ALPAQT
Trigger: GGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGC...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR CCA 90 bp TTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCATGGCCCCAGGCTGCATaGGCTCAGGTAGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: FITKQDRREPGPDLAVAPWPQAA*AQVGSD
Trigger: GTCTGAGCCTACCTGAGCCCATGCAGCCTGGGGCCA...TGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
3UTR CAA 72 bp GGCAAGGACACTCACGAAGCAGGCATCCTTCCCGCCTaGGGCATTGCCAGCACAAACCATGTCTCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: GKDTHEAGILPA*GIASTNHVSKD
Trigger: ATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR TCA 90 bp TCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGTGCCCAGCGGTGGCTaGGCAGGCTCACTCCGCATA +
Preference number: 4 (lower is better)
Translates to: SPKMSLRKLYLRKRWLHIVPSGG*AGSLRI
Trigger: TATGCGGAGTGAGCCTGCTCAGCCACCGCTGGGCAC...TATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR TCA 90 bp GGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGGTGCCCAGCGGTGGCTaGGCAGGCTCACTCCGCATA +
Preference number: 4 (lower is better)
Translates to: GMCLLPNKTEENQGLTWQVPSGG*AGSLRI
Trigger: TATGCGGAGTGAGCCTGCTCAGCCACCGCTGGGCAC...CTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGG +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVGNVIG*IPQVAR
Trigger: CCTCGCTACCTGGGGAATTCACCCTATGACATTGCC...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR TCA 90 bp GTGCAGACAGCTTCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGGTGCCTCATCCTCTTTaGTGTACCCCCAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: VQTASPRQCHRVNSPGSEVPHPL*CTPSQS
Trigger: TGACTGGCTGGGGGTACATCAAAGAGGATGAGGCAC...CTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGTCTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR GCA 90 bp TCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTGTGCGCCGCCGTGAGTaGCCAGCGGTGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: STGMCLLPNKTEENQGLTVRRRE*PAVAEQ
Trigger: CTGCTCAGCCACCGCTGGGCACTCACGGCGGCGCAC...AGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp GAAGTAACGGGTGTAGTAGGCCTGCAGGCTCCAGAAGGATGGCATGGAAGTCAGAGTGTAGGTGACAGGTaGAGACAGCTTCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: EVTGVVGLQAPEGWHGSQSVGDR*RQLHQG
Trigger: GCCTTGGTGAAGCTGTCTGCACCTGTCACCTACACT...CTGACTTCCATGCCATCCTTCTGGAGCCTGCAGGCCTACTACACCCGTTACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR GCA 90 bp AAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGTGGGGAGATGGCAGTaGCTCATCCTCTTTGATGTA +
Preference number: 4 (lower is better)
Translates to: KQDRREPGPDLAVAPGCMVGRWQ*LILFDV
Trigger: TACATCAAAGAGGATGAGGCACTGCCATCTCCCCAC...CATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp CTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGGATGTTCCCGCCTTGGGCATTaGCAGCACAAACCATGTCTC +
Preference number: 4 (lower is better)
Translates to: LSGSQTQMWRPGDRWAGCSRLGH*QHKPCL
Trigger: GAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGA...ACATCCAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR GCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGTCCCGCCTTGGGCATTaGCAGCACAAACCATGTCTC +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVSRLGH*QHKPCL
Trigger: GAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGA...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR GCA 90 bp ATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGGCAGTGGCCCCAGGCTaGATGGGCTCAGGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: MCLLPNKTEENQGLTWQWAVAPG*MGSGRL
Trigger: GAGCCTACCTGAGCCCATGCAGCCTGGGGCCACTGC...CCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp GTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCTCACTCCGCATACGTaGGAATCCCACAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VFITKQDRREPGPDLAVALTPHT*ESHRRR
Trigger: CCTGCGCCTGTGGGATTCCCACGTATGCGGAGTGAG...GGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp TGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCGTCAGCTGGCCAAACTaGACCATCCACCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: CLLPNKTEENQGLTWQWPVSWPN*TIHPEG
Trigger: TCCCTCCGGGTGGATGGTCCAGTTTGGCCAGCTGAC...GGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp AACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGTCTCAAACTCAAATGTaGAGGCCTGGAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: NKTEENQGLTWQWPQAAWSQTQM*RPGDRW
Trigger: CCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGA...CCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp CAGGTGCAGACAGCTTCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGGGTGTGGGGAGATaGCAGTGCCTCATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QVQTASPRQCHRVNSPGSEGVGR*QCLILF
Trigger: AAAGAGGATGAGGCACTGCCATCTCCCCACACCCTC...GCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGTCTGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR CCA 90 bp ATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGGGCCATCAGCTTCTaGATCCACTCAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ITKQDRREPGPDLAVAPGWAISF*IHSKWW
Trigger: CCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCA...GCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGTGGGACATGCCACTCTaGGCCATCAGCTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVWDMPL*AISFWI
Trigger: GATCCAGAAGCTGATGGCCCAGAGTGGCATGTCCCA...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR CCA 90 bp GTGCAGACAGCTTCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGTCTGCATCTGCAGAGTaGGGCAACAGTCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: VQTASPRQCHRVNSPGSESASAE*GNSLHL
Trigger: GAGGTGGAGACTGTTGCCCCACTCTGCAGATGCAGA...CTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR TCA 90 bp TGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAGCGACTCCGGCTTCCTaGGTCCAGCCCGAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CPARHQLECVYYQTRQKRATPAS*VQPEPA
Trigger: TGCTGGCTCGGGCTGGACTCAGGAAGCCGGAGTCGC...TCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR TCA 90 bp TCACCCAGCAGTCTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGATTTATGATGGCGACCTaGACTTCCTGGAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SPSSLSGSQTQMWRPGDRFMMAT*TSWRVW
Trigger: CCACACCCTCCAGGAAGTTCAGGTCGCCATCATAAA...TCTGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAGACTGCTGGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR TCA 90 bp TCTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGGATGTTTATGATGGCGACCTaGACTTCCTGGAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SVRFSNSNVEAWRQMGWMFMMAT*TSWRVW
Trigger: CCACACCCTCCAGGAAGTTCAGGTCGCCATCATAAA...CATCCAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR TCA 90 bp CCAGTCACCCAGCAGTCTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGATGCGGAAACTGTACTTaGGGAAGAGGTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: PVTQQSVRFSNSNVEAWRCGNCT*GRGGCT
Trigger: TGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCA...TCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAGACTGCTGGGTGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR TCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGTTCCCTCATCCTCTTTaGTGTACCCCCAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVFPHPL*CTPSQS
Trigger: TGACTGGCTGGGGGTACATCAAAGAGGATGAGGGAA...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR TCA 90 bp ACAGCTTCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGGGCTCATTCCCTCATCCTCTTTaGTGTACCCCCAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: TASPRQCHRVNSPGSEGSFPHPL*CTPSQS
Trigger: TGACTGGCTGGGGGTACATCAAAGAGGATGAGGGAA...TGAGCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR GCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGAGTGTAGGTGACAGGTaGAGACAGCTTCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVSVGDR*RQLHQG
Trigger: GCCTTGGTGAAGCTGTCTGCACCTGTCACCTACACT...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR GCA 90 bp CTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGGATGTAGTGTAGGTGACAGGTaGAGACAGCTTCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: LSGSQTQMWRPGDRWAGCSVGDR*RQLHQG
Trigger: GCCTTGGTGAAGCTGTCTGCACCTGTCACCTACACT...ACATCCAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR GCA 90 bp AGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCGCAGTGGCCCCAGGCTaGATGGGCTCAGGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: RHQLECVYYQTRQKRTRAAVAPG*MGSGRL
Trigger: GAGCCTACCTGAGCCCATGCAGCCTGGGGCCACTGC...GGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CCA 90 bp TTGCCAGCACAAACCATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGCTCACTCCGCATACGTaGGAATCCCACAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPAQTMSPKMSLRKLYLRLTPHT*ESHRRR
Trigger: CCTGCGCCTGTGGGATTCCCACGTATGCGGAGTGAG...CCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATGGTTTGTGCTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CCA 90 bp GTCACCCATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGACTTCCTGGAGGGTGTaGGGAGATGGCAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: VTHVSKDVLAETVLEEEVTSWRV*GDGSAS
Trigger: TGAGGCACTGCCATCTCCCCACACCCTCCAGGAAGT...CACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATGGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR CCA 90 bp TTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAACTTCCTGGAGGGTGTaGGGAGATGGCAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: FITKQDRREPGPDLAVAPTSWRV*GDGSAS
Trigger: TGAGGCACTGCCATCTCCCCACACCCTCCAGGAAGT...TGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp GGTAGCGAGGGCTCAGATAGATATTCGATACGAAGTAACGGGTGTAGTAGGCGTACTTCCTGGAGGGTGTaGGGAGATGGCAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: GSEGSDRYSIRSNGCSRRTSWRV*GDGSAS
Trigger: TGAGGCACTGCCATCTCCCCACACCCTCCAGGAAGT...ACGCCTACTACACCCGTTACTTCGTATCGAATATCTATCTGAGCCCTCGCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR CCA 90 bp ACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGAGACACCGGGCCGATTaGGCCGACCACAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: TGMCLLPNKTEENQGLTWRHRAD*ADHSPL
Trigger: GAGTGGGCTGTGGTCGGCCCAATCGGCCCGGTGTCT...CCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGTGGGCCATCAGCTTCTaGATCCACTCAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVWAISF*IHSKWW
Trigger: CCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCA...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR CCA 90 bp AATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGCGGCCAGGAGGGGTCTaGCTGGGACATGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: NVFITKQDRREPGPDLAVRPGGV*LGHATL
Trigger: CAGAGTGGCATGTCCCAGCCAGACCCCTCCTGGCCG...CACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp TCAGATAGATATTCGATACGAAGTAACGGGTGTAGTAGGCCTGCAGGCTCCAGACTGGGCTGGGAGTGGTaGCAAGGACACTCACGAAGC +
Preference number: 4 (lower is better)
Translates to: SDRYSIRSNGCSRPAGSRLGWEW*QGHSRS
Trigger: GCTTCGTGAGTGTCCTTGCCACCACTCCCAGCCCAG...TCTGGAGCCTGCAGGCCTACTACACCCGTTACTTCGTATCGAATATCTATCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
3UTR CAA 72 bp GGTCCACCTGAGTCACCCATGTCTCCAAAGATGTCCTaGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: GPPESPMSPKMS*RKLYLRKRWLH
Trigger: GTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATGGGTGACTCAGGTGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR TCA 90 bp GCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAAGTGCCCAGCGGTGGCTaGGCAGGCTCACTCCGCATA +
Preference number: 4 (lower is better)
Translates to: ALQGINWNVFITKQDRREVPSGG*AGSLRI
Trigger: TATGCGGAGTGAGCCTGCTCAGCCACCGCTGGGCAC...TTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR TCA 90 bp AACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGTGCCCAGCGGTGGCTaGGCAGGCTCACTCCGCATA +
Preference number: 4 (lower is better)
Translates to: NWNVFITKQDRREPGPDLVPSGG*AGSLRI
Trigger: TATGCGGAGTGAGCCTGCTCAGCCACCGCTGGGCAC...CAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp TTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGTGCCTCATCCTCTTTaGTGTACCCCCAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: FITKQDRREPGPDLAVAPVPHPL*CTPSQS
Trigger: TGACTGGCTGGGGGTACATCAAAGAGGATGAGGCAC...TGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGTGCGGAAACTGTACTTaGGGAAGAGGTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVCGNCT*GRGGCT
Trigger: TGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCA...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR TCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGACTCAAAGTGGTGGCTaGTATTGGTGTAGACACCGG +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVTQSGG*YWCRHR
Trigger: CCGGTGTCTACACCAATATCAGCCACCACTTTGAGT...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR TCA 90 bp AATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGAAGAGAACCAGGGCCTaGCTTGGCAGTGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: NVFITKQDRREPGPDLAVKRTRA*LGSGPR
Trigger: CCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTT...CACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp CTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGGATGTGTGGGGAGATGGCAGTaGCTCATCCTCTTTGATGTA +
Preference number: 4 (lower is better)
Translates to: LSGSQTQMWRPGDRWAGCVGRWQ*LILFDV
Trigger: TACATCAAAGAGGATGAGGCACTGCCATCTCCCCAC...ACATCCAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR GCA 90 bp CAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGGCAGTGGCCCCAGGCTaGATGGGCTCAGGTAGGCTC +
Preference number: 4 (lower is better)
Translates to: QGINWNVFITKQDRREPGAVAPG*MGSGRL
Trigger: GAGCCTACCTGAGCCCATGCAGCCTGGGGCCACTGC...CCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CCA 90 bp GGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGGTCAGCTGGCCAAACTaGACCATCCACCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GMCLLPNKTEENQGLTWQVSWPN*TIHPEG
Trigger: TCCCTCCGGGTGGATGGTCCAGTTTGGCCAGCTGAC...CTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp TTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTTCTCAAACTCAAATGTaGAGGCCTGGAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: LPNKTEENQGLTWQWPQASQTQM*RPGDRW
Trigger: CCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGA...AGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp TGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCGAGGGTGTGGGGAGATaGCAGTGCCTCATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: CLLPNKTEENQGLTWQWPEGVGR*QCLILF
Trigger: AAAGAGGATGAGGCACTGCCATCTCCCCACACCCTC...GGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp ATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAGACACCGGGCCGATTaGGCCGACCACAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: MPCKASTGMCLLPNKTEERHRAD*ADHSPL
Trigger: GAGTGGGCTGTGGTCGGCCCAATCGGCCCGGTGTCT...CTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CCA 90 bp AACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGAGACACCGGGCCGATTaGGCCGACCACAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: NWNVFITKQDRREPGPDLRHRAD*ADHSPL
Trigger: GAGTGGGCTGTGGTCGGCCCAATCGGCCCGGTGTCT...CAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp TTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGTGGGCCATCAGCTTCTaGATCCACTCAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLPNKTEENQGLTWQWPQWAISF*IHSKWW
Trigger: CCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCA...CTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp TGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCTGGGACATGCCACTCTaGGCCATCAGCTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: CLLPNKTEENQGLTWQWPWDMPL*AISFWI
Trigger: GATCCAGAAGCTGATGGCCCAGAGTGGCATGTCCCA...GGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp GCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACGGCCAGGAGGGGTCTaGCTGGGACATGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: ALQGINWNVFITKQDRRERPGGV*LGHATL
Trigger: CAGAGTGGCATGTCCCAGCCAGACCCCTCCTGGCCG...TTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CCA 90 bp TGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCATGGCCCCAGGCTGCATaGGCTCAGGTAGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: WNVFITKQDRREPGPDLAWPQAA*AQVGSD
Trigger: GTCTGAGCCTACCTGAGCCCATGCAGCCTGGGGCCA...TGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp TTTGAAGAATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGAGCGACTCCGGCTTCCTaGGTCCAGCCCGAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FEECPARHQLECVYYQTRATPAS*VQPEPA
Trigger: TGCTGGCTCGGGCTGGACTCAGGAAGCCGGAGTCGC...TCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATTCTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR TCA 90 bp AGAATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGTGCCCAGCGGTGGCTaGGCAGGCTCACTCCGCATA +
Preference number: 4 (lower is better)
Translates to: RMPCKASTGMCLLPNKTEVPSGG*AGSLRI
Trigger: TATGCGGAGTGAGCCTGCTCAGCCACCGCTGGGCAC...TTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR TCA 90 bp AAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGGATGTGTTTAGTGTAGGTGTGCCTCATCCTCTTTaGTGTACCCCCAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: KLKCGGLETDGLDVFSVGVPHPL*CTPSQS
Trigger: TGACTGGCTGGGGGTACATCAAAGAGGATGAGGCAC...ACCTACACTAAACACATCCAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR TCA 90 bp AAGGGTCCACCTGAGTCACCCATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTGCGGAAACTGTACTTaGGGAAGAGGTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: KGPPESPMSPKMSLRKLYCGNCT*GRGGCT
Trigger: TGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCA...GTACAGTTTCCGCAAGGACATCTTTGGAGACATGGGTGACTCAGGTGGACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR TCA 90 bp CAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGGGCCAAGGGTCCACCTaGGTCACCGAAGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: QGINWNVFITKQDRREPGGQGST*VTEAGI
Trigger: GATGCCTGCTTCGGTGACTCAGGTGGACCCTTGGCC...CCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000005995.8
ENST00000634351.2
CDS-3UTR TCA 90 bp TCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTGGCCAAGGGTCCACCTaGGTCACCGAAGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: STGMCLLPNKTEENQGLTGQGST*VTEAGI
Trigger: GATGCCTGCTTCGGTGACTCAGGTGGACCCTTGGCC...AGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000634351.2
ENST00000635090.1
CDS-3UTR TCA 90 bp TTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGACTCAAAGTGGTGGCTaGTATTGGTGTAGACACCGG +
Preference number: 4 (lower is better)
Translates to: LLPNKTEENQGLTWQWPQTQSGG*YWCRHR
Trigger: CCGGTGTCTACACCAATATCAGCCACCACTTTGAGT...CTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp TGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAAAGAGAACCAGGGCCTaGCTTGGCAGTGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: CPARHQLECVYYQTRQKRKRTRA*LGSGPR
Trigger: CCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTT...TCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR TCA 90 bp GGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGGGCCAAGGGTCCACCTaGGTCACCCATGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: GMCLLPNKTEENQGLTWQGQGST*VTHVSK
Trigger: TTTGGAGACATGGGTGACTCAGGTGGACCCTTGGCC...CTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450020.7
ENST00000634454.1
CDS-3UTR GCA 90 bp GTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCAGTGTAGGTGACAGGTaGAGACAGCTTCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: VFITKQDRREPGPDLAVASVGDR*RQLHQG
Trigger: GCCTTGGTGAAGCTGTCTGCACCTGTCACCTACACT...GGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp TCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGGGCTCAGATAGAGTGGGGAGATGGCAGTaGCTCATCCTCTTTGATGTA +
Preference number: 4 (lower is better)
Translates to: SPRQCHRVNSPGSEGSDRVGRWQ*LILFDV
Trigger: TACATCAAAGAGGATGAGGCACTGCCATCTCCCCAC...TCTATCTGAGCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR GCA 90 bp TTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGTGGGGAGATGGCAGTaGCTCATCCTCTTTGATGTA +
Preference number: 4 (lower is better)
Translates to: LLPNKTEENQGLTWQWPQVGRWQ*LILFDV
Trigger: TACATCAAAGAGGATGAGGCACTGCCATCTCCCCAC...CTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp CATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCATCCCGCCTTGGGCATTaGCAGCACAAACCATGTCTC +
Preference number: 4 (lower is better)
Translates to: HVSKDVLAETVLEEEVVASRLGH*QHKPCL
Trigger: GAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGA...TGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CCA 90 bp AGTCTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGGATCTCAAACTCAAATGTaGAGGCCTGGAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: SLSGSQTQMWRPGDRWAGSQTQM*RPGDRW
Trigger: CCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGA...TCCAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGTCTCAAACTCAAATGTaGAGGCCTGGAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVSQTQM*RPGDRW
Trigger: CCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGA...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR CCA 90 bp GTGCAGACAGCTTCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGTCTCAAACTCAAATGTaGAGGCCTGGAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: VQTASPRQCHRVNSPGSESQTQM*RPGDRW
Trigger: CCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGA...CTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CCA 90 bp CCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATACTTGAGGAAGAGGTaGTTGCACATAGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: PNKTEENQGLTWQWPQAAYLRKR*LHIELF
Trigger: AAACAACTCTATGTGCAACCACCTCTTCCTCAAGTA...TGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp ATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGGCATCCTTCCCGCCTTaGGCATTGCCAGCACAAACC +
Preference number: 4 (lower is better)
Translates to: MCLLPNKTEENQGLTWQWASFPP*ALPAQT
Trigger: GGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGC...CCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000634351.2
ENST00000635090.1
CDS-3UTR CCA 90 bp TGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCTGGGCCATCAGCTTCTaGATCCACTCAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CLLPNKTEENQGLTWQWPWAISF*IHSKWW
Trigger: CCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCA...GGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp AACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGTGGCCCCAGGCTGCATaGGCTCAGGTAGGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: NWNVFITKQDRREPGPDLWPQAA*AQVGSD
Trigger: GTCTGAGCCTACCTGAGCCCATGCAGCCTGGGGCCA...CAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp AATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGGCCTGACTTGGCAGTaGCCCCAGGCTGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: NALQGINWNVFITKQDRRGLTWQ*PQAAWA
Trigger: AGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCC...TCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CCA 90 bp TTGCCAGCACAAACCATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGTCCACCTCCCGGGGTTaGCATGAGGGTCAAATAAGG +
Preference number: 4 (lower is better)
Translates to: LPAQTMSPKMSLRKLYLRSTSRG*HEGQIR
Trigger: CCTTATTTGACCCTCATGCCAACCCCGGGAGGTGGA...CCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATGGTTTGTGCTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR TCA 90 bp GTACTTGAGGAAGAGGTGGTTGCACATAGAGTTGTTTATGATGGCGACCTGAACGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGG +
Preference number: 4 (lower is better)
Translates to: VLEEEVVAHRVVYDGDLNGNVIG*IPQVAR
Trigger: CCTCGCTACCTGGGGAATTCACCCTATGACATTGCC...GTTCAGGTCGCCATCATAAACAACTCTATGTGCAACCACCTCTTCCTCAAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR TCA 90 bp GTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCTGCGGAAACTGTACTTaGGGAAGAGGTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: VFITKQDRREPGPDLAVACGNCT*GRGGCT
Trigger: TGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCA...GGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp GTGAATTCCCCAGGTAGCGAGGGCTCAGATAGATATTCGATACGAAGTAACGGGTGCGGAAACTGTACTTaGGGAAGAGGTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: VNSPGSEGSDRYSIRSNGCGNCT*GRGGCT
Trigger: TGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCA...CCCGTTACTTCGTATCGAATATCTATCTGAGCCCTCGCTACCTGGGGAATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR TCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGTTTATGATGGCGACCTaGACTTCCCTCATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVFMMAT*TSLILF
Trigger: AAAGAGGATGAGGGAAGTTCAGGTCGCCATCATAAA...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR GCA 90 bp CATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCAAGTGTAGGTGACAGGTaGAGACAGCTTCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: HVSKDVLAETVLEEEVVASVGDR*RQLHQG
Trigger: GCCTTGGTGAAGCTGTCTGCACCTGTCACCTACACT...TGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR GCA 90 bp GTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCGTGGGGAGATGGCAGTaGCTCATCCTCTTTGATGTA +
Preference number: 4 (lower is better)
Translates to: VFITKQDRREPGPDLAVAVGRWQ*LILFDV
Trigger: TACATCAAAGAGGATGAGGCACTGCCATCTCCCCAC...GGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp GGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTCCCGCCTTGGGCATTaGCAGCACAAACCATGTCTC +
Preference number: 4 (lower is better)
Translates to: GMCLLPNKTEENQGLTWQSRLGH*QHKPCL
Trigger: GAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGA...CTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000634351.2
ENST00000635090.1
CDS-3UTR CCA 90 bp GCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACTCACTCCGCATACGTaGGAATCCCACAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: ALQGINWNVFITKQDRRELTPHT*ESHRRR
Trigger: CCTGCGCCTGTGGGATTCCCACGTATGCGGAGTGAG...TTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CCA 90 bp ATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACGTCAGCTGGCCAAACTaGACCATCCACCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: INWNVFITKQDRREPGPDVSWPN*TIHPEG
Trigger: TCCCTCCGGGTGGATGGTCCAGTTTGGCCAGCTGAC...GTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CCA 90 bp TTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGTCTCAAACTCAAATGTaGAGGCCTGGAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: LLPNKTEENQGLTWQWPQSQTQM*RPGDRW
Trigger: CCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGA...CTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp AATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGACTTCCTGGAGGGTGTaGGGAGATGGCAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: NVFITKQDRREPGPDLAVTSWRV*GDGSAS
Trigger: TGAGGCACTGCCATCTCCCCACACCCTCCAGGAAGT...CACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp ATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGTGGGACATGCCACTCTaGGCCATCAGCTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: MCLLPNKTEENQGLTWQWWDMPL*AISFWI
Trigger: GATCCAGAAGCTGATGGCCCAGAGTGGCATGTCCCA...CCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp TTTGAAGAATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACGGCCAGGAGGGGTCTaGCTGGGACATGCCACTCTG +
Preference number: 4 (lower is better)
Translates to: FEECPARHQLECVYYQTRRPGGV*LGHATL
Trigger: CAGAGTGGCATGTCCCAGCCAGACCCCTCCTGGCCG...TCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATTCTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
3UTR CAA 72 bp GCATTGCCAGCACAAACCATGTCTCCAAAGATGTCCTaGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: ALPAQTMSPKMS*RKLYLRKRWLH
Trigger: GTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATGGTTTGTGCTGGCAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR TCA 90 bp ACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGG +
Preference number: 4 (lower is better)
Translates to: TGMCLLPNKTEENQGLTWGNVIG*IPQVAR
Trigger: CCTCGCTACCTGGGGAATTCACCCTATGACATTGCC...CCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp AGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCGTGCCTCATCCTCTTTaGTGTACCCCCAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: RHQLECVYYQTRQKRTRAVPHPL*CTPSQS
Trigger: TGACTGGCTGGGGGTACATCAAAGAGGATGAGGCAC...GGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR TCA 90 bp AAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGAGTTGTTCCCTCATCCTCTTTaGTGTACCCCCAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: KMSLRKLYLRKRWLHIELFPHPL*CTPSQS
Trigger: TGACTGGCTGGGGGTACATCAAAGAGGATGAGGGAA...CAACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR GCA 90 bp GTACTTGAGGAAGAGGTGGTTGCACATAGAGTTGTTTATGATGGCGACCTGAACAGTGTAGGTGACAGGTaGAGACAGCTTCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: VLEEEVVAHRVVYDGDLNSVGDR*RQLHQG
Trigger: GCCTTGGTGAAGCTGTCTGCACCTGTCACCTACACT...GTTCAGGTCGCCATCATAAACAACTCTATGTGCAACCACCTCTTCCTCAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR GCA 90 bp TCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATACTCCGTTTCTGCATCTaGAGAGTGGGGCAACAGTCT +
Preference number: 4 (lower is better)
Translates to: SPKMSLRKLYLRKRWLHILRFCI*RVGQQS
Trigger: AGACTGTTGCCCCACTCTGCAGATGCAGAAACGGAG...TATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CCA 90 bp CTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGTCAGCTGGCCAAACTaGACCATCCACCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LQGINWNVFITKQDRREPVSWPN*TIHPEG
Trigger: TCCCTCCGGGTGGATGGTCCAGTTTGGCCAGCTGAC...TGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CCA 90 bp TGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACTTCCTGGAGGGTGTaGGGAGATGGCAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: CPARHQLECVYYQTRQKRTSWRV*GDGSAS
Trigger: TGAGGCACTGCCATCTCCCCACACCCTCCAGGAAGT...TCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CCA 90 bp GCAGTCTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGTACTTGAGGAAGAGGTaGTTGCACATAGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: AVCPVLKLKCGGLETDGLYLRKR*LHIELF
Trigger: AAACAACTCTATGTGCAACCACCTCTTCCTCAAGTA...CAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CCA 90 bp CAGACAGCTTCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGGGCTACTTGAGGAAGAGGTaGTTGCACATAGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: QTASPRQCHRVNSPGSEGYLRKR*LHIELF
Trigger: AAACAACTCTATGTGCAACCACCTCTTCCTCAAGTA...GCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGAAGCTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CCA 90 bp TCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTGCATCCTTCCCGCCTTaGGCATTGCCAGCACAAACC +
Preference number: 4 (lower is better)
Translates to: STGMCLLPNKTEENQGLTASFPP*ALPAQT
Trigger: GGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGC...AGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000634351.2
ENST00000635090.1
CDS-3UTR TCA 90 bp GAATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGGGCAATGTCATAGGGTaGATTCCCCAGGTAGCGAGG +
Preference number: 4 (lower is better)
Translates to: ECPARHQLECVYYQTRQKGNVIG*IPQVAR
Trigger: CCTCGCTACCTGGGGAATTCACCCTATGACATTGCC...CTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR TCA 90 bp GCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAAGTGCCTCATCCTCTTTaGTGTACCCCCAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: ALQGINWNVFITKQDRREVPHPL*CTPSQS
Trigger: TGACTGGCTGGGGGTACATCAAAGAGGATGAGGCAC...TTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR TCA 90 bp ACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGTTTATGATGGCGACCTaGACTTCCTGGAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TGMCLLPNKTEENQGLTWFMMAT*TSWRVW
Trigger: CCACACCCTCCAGGAAGTTCAGGTCGCCATCATAAA...CCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp GCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGAGTTGTTTATGATGGCTGCGGAAACTGTACTTaGGGAAGAGGTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: AETVLEEEVVAHRVVYDGCGNCT*GRGGCT
Trigger: TGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCA...GCCATCATAAACAACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR TCA 90 bp GGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGACTCAAAGTGGTGGCTaGTATTGGTGTAGACACCGG +
Preference number: 4 (lower is better)
Translates to: GMCLLPNKTEENQGLTWQTQSGG*YWCRHR
Trigger: CCGGTGTCTACACCAATATCAGCCACCACTTTGAGT...CTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp AATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGGCCAAGGGTCCACCTaGGTCACCCATGTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: NALQGINWNVFITKQDRRGQGST*VTHVSK
Trigger: TTTGGAGACATGGGTGACTCAGGTGGACCCTTGGCC...TCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450020.7
ENST00000634454.1
CDS-3UTR GCA 90 bp ACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGAGTGTAGGTGACAGGTaGAGACAGCTTCACCAAGGC +
Preference number: 4 (lower is better)
Translates to: TGMCLLPNKTEENQGLTWSVGDR*RQLHQG
Trigger: GCCTTGGTGAAGCTGTCTGCACCTGTCACCTACACT...CCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp AACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGTCCCGCCTTGGGCATTaGCAGCACAAACCATGTCTC +
Preference number: 4 (lower is better)
Translates to: NWNVFITKQDRREPGPDLSRLGH*QHKPCL
Trigger: GAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGA...CAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000634351.2
ENST00000635090.1
CDS-3UTR CCA 90 bp TGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAGAGGGTGTGGGGAGATaGCAGTGCCTCATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: CPARHQLECVYYQTRQKREGVGR*QCLILF
Trigger: AAAGAGGATGAGGCACTGCCATCTCCCCACACCCTC...TCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CCA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGTACTTGAGGAAGAGGTaGTTGCACATAGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: PLWAISFWIHSKWWLILVYLRKR*LHIELF
Trigger: AAACAACTCTATGTGCAACCACCTCTTCCTCAAGTA...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR CCA 90 bp AATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGCATCCTTCCCGCCTTaGGCATTGCCAGCACAAACC +
Preference number: 4 (lower is better)
Translates to: NALQGINWNVFITKQDRRASFPP*ALPAQT
Trigger: GGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGC...TCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000005995.8
ENST00000634351.2
CDS-3UTR TCA 90 bp CTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGTGCCTCATCCTCTTTaGTGTACCCCCAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LQGINWNVFITKQDRREPVPHPL*CTPSQS
Trigger: TGACTGGCTGGGGGTACATCAAAGAGGATGAGGCAC...TGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR TCA 90 bp TCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTTTATGATGGCGACCTaGACTTCCTGGAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: STGMCLLPNKTEENQGLTFMMAT*TSWRVW
Trigger: CCACACCCTCCAGGAAGTTCAGGTCGCCATCATAAA...AGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR TCA 90 bp ATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGTTTATGATGGCGACCTaGACTTCCTGGAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: MPCKASTGMCLLPNKTEEFMMAT*TSWRVW
Trigger: CCACACCCTCCAGGAAGTTCAGGTCGCCATCATAAA...CTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR TCA 90 bp AGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCACTCAAAGTGGTGGCTaGTATTGGTGTAGACACCGG +
Preference number: 4 (lower is better)
Translates to: RHQLECVYYQTRQKRTRATQSGG*YWCRHR
Trigger: CCGGTGTCTACACCAATATCAGCCACCACTTTGAGT...GGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR TCA 90 bp TGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAACTCAAAGTGGTGGCTaGTATTGGTGTAGACACCGG +
Preference number: 4 (lower is better)
Translates to: WNVFITKQDRREPGPDLATQSGG*YWCRHR
Trigger: CCGGTGTCTACACCAATATCAGCCACCACTTTGAGT...TGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR GCA 90 bp AGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCGTGGGGAGATGGCAGTaGCTCATCCTCTTTGATGTA +
Preference number: 4 (lower is better)
Translates to: RHQLECVYYQTRQKRTRAVGRWQ*LILFDV
Trigger: TACATCAAAGAGGATGAGGCACTGCCATCTCCCCAC...GGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CCA 90 bp ATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGTCTCAAACTCAAATGTaGAGGCCTGGAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: MCLLPNKTEENQGLTWQWSQTQM*RPGDRW
Trigger: CCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGA...CCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp AAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGAGTTGTCTCAAACTCAAATGTaGAGGCCTGGAGACAGATGG +
Preference number: 4 (lower is better)
Translates to: KMSLRKLYLRKRWLHIELSQTQM*RPGDRW
Trigger: CCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGA...CAACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CCA 90 bp CTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGAGGGTGTGGGGAGATaGCAGTGCCTCATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LQGINWNVFITKQDRREPEGVGR*QCLILF
Trigger: AAAGAGGATGAGGCACTGCCATCTCCCCACACCCTC...TGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CCA 90 bp AATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGATGGGACATGCCACTCTaGGCCATCAGCTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: NALQGINWNVFITKQDRRWDMPL*AISFWI
Trigger: GATCCAGAAGCTGATGGCCCAGAGTGGCATGTCCCA...TCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR TCA 90 bp TTGAAGAATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACTTTATGATGGCGACCTaGACTTCCTGGAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LKNALQGINWNVFITKQDFMMAT*TSWRVW
Trigger: CCACACCCTCCAGGAAGTTCAGGTCGCCATCATAAA...GTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATTCTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR TCA 90 bp ATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGTGCGGAAACTGTACTTaGGGAAGAGGTGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: MPCKASTGMCLLPNKTEECGNCT*GRGGCT
Trigger: TGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCA...CTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR TCA 90 bp GTACTTGAGGAAGAGGTGGTTGCACATAGAGTTGTTTATGATGGCGACCTGAACTTTATGATGGCGACCTaGACTTCCCTCATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: VLEEEVVAHRVVYDGDLNFMMAT*TSLILF
Trigger: AAAGAGGATGAGGGAAGTTCAGGTCGCCATCATAAA...GTTCAGGTCGCCATCATAAACAACTCTATGTGCAACCACCTCTTCCTCAAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR GCA 90 bp TGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAGTGGGGAGATGGCAGTaGCTCATCCTCTTTGATGTA +
Preference number: 4 (lower is better)
Translates to: CPARHQLECVYYQTRQKRVGRWQ*LILFDV
Trigger: TACATCAAAGAGGATGAGGCACTGCCATCTCCCCAC...TCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR GCA 90 bp TTTGAAGAATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGATCCCGCCTTGGGCATTaGCAGCACAAACCATGTCTC +
Preference number: 4 (lower is better)
Translates to: FEECPARHQLECVYYQTRSRLGH*QHKPCL
Trigger: GAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGA...TCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATTCTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000005995.8
ENST00000634351.2
CDS-3UTR CCA 90 bp TTTGAAGAATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGAGAGGGTGTGGGGAGATaGCAGTGCCTCATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: FEECPARHQLECVYYQTREGVGR*QCLILF
Trigger: AAAGAGGATGAGGCACTGCCATCTCCCCACACCCTC...TCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATTCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CCA 90 bp GGTAGCGAGGGCTCAGATAGATATTCGATACGAAGTAACGGGTGTAGTAGGCGTTACTTGAGGAAGAGGTaGTTGCACATAGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: GSEGSDRYSIRSNGCSRRYLRKR*LHIELF
Trigger: AAACAACTCTATGTGCAACCACCTCTTCCTCAAGTA...ACGCCTACTACACCCGTTACTTCGTATCGAATATCTATCTGAGCCCTCGCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR CCA 90 bp TTTGAAGAATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGATGGGACATGCCACTCTaGGCCATCAGCTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: FEECPARHQLECVYYQTRWDMPL*AISFWI
Trigger: GATCCAGAAGCTGATGGCCCAGAGTGGCATGTCCCA...TCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATTCTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
3UTR CAA 72 bp CCCATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTaGAGGAAGAGGTGGTTGCACATAGAGTTGTTTATG +
Preference number: 4 (lower is better)
Translates to: PMSPKMSLRKLY*RKRWLHIELFM
Trigger: CATAAACAACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR CCA 90 bp CATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCATACTTGAGGAAGAGGTaGTTGCACATAGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: HVSKDVLAETVLEEEVVAYLRKR*LHIELF
Trigger: AAACAACTCTATGTGCAACCACCTCTTCCTCAAGTA...TGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
3UTR CAA 72 bp ACCATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTaGAGGAAGAGGTGGTTGCACATAGAGTTGTTTATG +
Preference number: 4 (lower is better)
Translates to: TMSPKMSLRKLY*RKRWLHIELFM
Trigger: CATAAACAACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGACATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CCA 90 bp ACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGTACTTGAGGAAGAGGTaGTTGCACATAGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: TGMCLLPNKTEENQGLTWYLRKR*LHIELF
Trigger: AAACAACTCTATGTGCAACCACCTCTTCCTCAAGTA...CCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp CAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGTACTTGAGGAAGAGGTaGTTGCACATAGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: QGINWNVFITKQDRREPGYLRKR*LHIELF
Trigger: AAACAACTCTATGTGCAACCACCTCTTCCTCAAGTA...CCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CCA 90 bp AACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGTACTTGAGGAAGAGGTaGTTGCACATAGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: NWNVFITKQDRREPGPDLYLRKR*LHIELF
Trigger: AAACAACTCTATGTGCAACCACCTCTTCCTCAAGTA...CAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp TCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTACTTGAGGAAGAGGTaGTTGCACATAGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: STGMCLLPNKTEENQGLTYLRKR*LHIELF
Trigger: AAACAACTCTATGTGCAACCACCTCTTCCTCAAGTA...AGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CCA 90 bp AATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGATACTTGAGGAAGAGGTaGTTGCACATAGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: NALQGINWNVFITKQDRRYLRKR*LHIELF
Trigger: AAACAACTCTATGTGCAACCACCTCTTCCTCAAGTA...TCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS TCA 90 bp CGCATGGTCCTGATAACGGCGCCGCCTCCTGCGACTCCGGCTTCCTaGGTCCAGCCCGAGCCAGCAGCAGCGCCAGCAGCAGCGCCCCGC +
Preference number: 5 (lower is better)
Translates to: RMVLITAPPPATPAS*VQPEPAAAPAAAPR
Trigger: GCGGGGCGCTGCTGCTGGCGCTGCTGCTGGCTCGGGCTGGACTCAGGAAGCCGGAGTCGCAGGAGGCGGCGCCGTTATCAGGACCATGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000570594.5
ENST00000570629.5
ENST00000634351.2
ENST00000634454.1
ENST00000634924.1
ENST00000635401.1
CDS CCA 90 bp ACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATaGGCTCAGGTAGGCTCAGACCGGCCCCAGGAGTGGGAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: TEENQGLTWQWPQAA*AQVGSDRPQEWESP
Trigger: TGGGCTCTCCCACTCCTGGGGCCGGTCTGAGCCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS GCA 90 bp CAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTaGATGGGCTCAGGTAGGCTCAGACCGGCCCCAGGAGTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: QDRREPGPDLAVAPG*MGSGRLRPAPGVGE
Trigger: CTCTCCCACTCCTGGGGCCGGTCTGAGCCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS GCA 90 bp GCGTGTGTGCAGCAGGAAGTAGGTGACACTGGAGATCCTCCCACGTaGTCTGCAGGGCCCGCCCATCCCCCTCCAGCGTCCGTTAGTTAC +
Preference number: 5 (lower is better)
Translates to: ACVQQEVGDTGDPPT*SAGPAHPPPASVSY
Trigger: GTAACTAACGGACGCTGGAGGGGGATGGGCGGGCCCTGCAGAGCACGTGGGAGGATCTCCAGTGTCACCTACTTCCTGCTGCACACACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571141.1
ENST00000634698.1
CDS CCA 90 bp TGGTTTCTCCAGCCTACCCTGGTGCGTGTGTTGCTCCTTGGCGTCTaGGTCAGCTCAGGCTGCTGTAACACAAATCCCACGCCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: WFLQPTLVRVLLLGV*VSSGCCNTNPTPWA
Trigger: CGCCCACGGCGTGGGATTTGTGTTACAGCAGCCTGAGCTGACCCAGACGCCAAGGAGCAACACACGCACCAGGGTAGGCTGGAGAAACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575739.1
ENST00000635038.1
CDS-3UTR CAA 90 bp AGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGTGCCTCATCCTCTTaGATGTACCCCCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: RREPGPDLAVAPGCMGSGSASSS*MYPQPV
Trigger: GACTGGCTGGGGGTACATCAAAGAGGATGAGGCACT...ACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CAA 90 bp GAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGGCTTGCGGAAACTGTACTaGAGGAAGAGGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: ENQGLTWQWPQAAWAQVGLRKLY*RKRWLH
Trigger: GTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAA...GCCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CAA 90 bp ACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCGGCATCCTTCCCGCCTaGGGCATTGCCAGCACAAAC +
Preference number: 5 (lower is better)
Translates to: TKQDRREPGPDLAVAPGCGILPA*GIASTN
Trigger: GTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCC...GCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000634351.2
ENST00000635090.1
CDS CCA 90 bp GCCAAGGGTCCACCTGAGTCACCGAAGCAGGCATCCTTCCCGCCTTaGGCATTGCCAGCACAAACCATGTCTCCAAAGATGTCCTTGCGG +
Preference number: 5 (lower is better)
Translates to: AKGPPESPKQASFPP*ALPAQTMSPKMSLR
Trigger: CCGCAAGGACATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGGTGACTCAGGTGGACCCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000574813.5
ENST00000634351.2
ENST00000634525.1
ENST00000635090.1
CDS CCA 90 bp TTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTaGCCCCAGGCTGCATGGGCTCAGGTAGGCTCAGACCGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: LLPNKTEENQGLTWQ*PQAAWAQVGSDRPQ
Trigger: CTGGGGCCGGTCTGAGCCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CAA 90 bp GAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGGCTCTCCAAAGATGTCCTaGCGGAAACTGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: ENQGLTWQWPQAAWAQVGSPKMS*RKLYLR
Trigger: CCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGA...GCCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CAA 90 bp TGGCAAGGACACTCACGAAGCAGGCATCCTTCCCGCCTTGGGCATTGCCAGCACCTTCCCTCATCCTCTTaGATGTACCCCCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: WQGHSRSRHPSRLGHCQHLPSSS*MYPQPV
Trigger: GACTGGCTGGGGGTACATCAAAGAGGATGAGGGAAG...GTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS GCA 90 bp GGATTCCCGGGTTCTGGTTTCTCCAGCCTACCCTGGTGCGTGTGTTaGTCCTTGGCGTCTGGGTCAGCTCAGGCTGCTGTAACACAAATC +
Preference number: 5 (lower is better)
Translates to: GFPGSGFSSLPWCVC*SLASGSAQAAVTQI
Trigger: GATTTGTGTTACAGCAGCCTGAGCTGACCCAGACGCCAAGGAGCAACACACGCACCAGGGTAGGCTGGAGAAACCAGAACCCGGGAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575739.1
ENST00000635038.1
CDS-3UTR CAA 90 bp AGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGGTCTCCAAAGATGTCCTaGCGGAAACTGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: REPGPDLAVAPGCMGSGRSPKMS*RKLYLR
Trigger: CCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGA...CCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CAA 90 bp AACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGTTCCCGCCTTGGGCATaGCCAGCACAAACCATGTCT +
Preference number: 5 (lower is better)
Translates to: NKTEENQGLTWQWPQAAWFPPWA*PAQTMS
Trigger: AGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAA...CCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000634351.2
ENST00000635090.1
CDS-3UTR CAA 90 bp ATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCGGCATCCTTCCCGCCTaGGGCATTGCCAGCACAAAC +
Preference number: 5 (lower is better)
Translates to: ITKQDRREPGPDLAVAPGGILPA*GIASTN
Trigger: GTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCC...GCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000634351.2
ENST00000635090.1
CDS-3UTR CAA 90 bp GAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGGCTTGAGGAAGAGGTGGTaGCACATAGAGTTGTTTATG +
Preference number: 5 (lower is better)
Translates to: ENQGLTWQWPQAAWAQVGLRKRW*HIELFM
Trigger: CATAAACAACTCTATGTGCAACCACCTCTTCCTCAA...GCCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CAA 90 bp AGGCATCCTTCCCGCCTTGGGCATTGCCAGCACAAACCATGTCTCCAAAGATGTGGCATCCTTCCCGCCTaGGGCATTGCCAGCACAAAC +
Preference number: 5 (lower is better)
Translates to: RHPSRLGHCQHKPCLQRCGILPA*GIASTN
Trigger: GTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCC...ACATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CAA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGGGCATCCTTCCCGCCTaGGGCATTGCCAGCACAAAC +
Preference number: 5 (lower is better)
Translates to: PLWAISFWIHSKWWLILVGILPA*GIASTN
Trigger: GTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCC...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS GCA 90 bp GTCCACCTGAGTCACCGAAGCAGGCATCCTTCCCGCCTTGGGCATTaGCAGCACAAACCATGTCTCCAAAGATGTCCTTGCGGAAACTGT +
Preference number: 5 (lower is better)
Translates to: VHLSHRSRHPSRLGH*QHKPCLQRCPCGNC
Trigger: ACAGTTTCCGCAAGGACATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGGTGACTCAGGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000574813.5
ENST00000634351.2
ENST00000634525.1
ENST00000635090.1
CDS CCA 90 bp ATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTaGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGGCTCAGACCGG +
Preference number: 5 (lower is better)
Translates to: MCLLPNKTEENQGLT*QWPQAAWAQVGSDR
Trigger: CCGGTCTGAGCCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CAA 90 bp CCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATTGCGGAAACTGTACTaGAGGAAGAGGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: PNKTEENQGLTWQWPQAALRKLY*RKRWLH
Trigger: GTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAA...TGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CAA 90 bp TGGCAAGGACACTCACGAAGCAGGCATCCTTCCCGCCTTGGGCATTGCCAGCACTCTCCAAAGATGTCCTaGCGGAAACTGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: WQGHSRSRHPSRLGHCQHSPKMS*RKLYLR
Trigger: CCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGA...GTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CAA 90 bp CGATACGAAGTAACGGGTGTAGTAGGCCTGCAGGCTCCAGAAGGATGGCATGGATTCCCGCCTTGGGCATaGCCAGCACAAACCATGTCT +
Preference number: 5 (lower is better)
Translates to: RYEVTGVVGLQAPEGWHGFPPWA*PAQTMS
Trigger: AGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAA...TCCATGCCATCCTTCTGGAGCCTGCAGGCCTACTACACCCGTTACTTCGTATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CAA 90 bp TCCCGGGGTTGGCATGAGGGTCAAATAAGGCACAGGGACACAGGATGCTTTCCTTTCCCGCCTTGGGCATaGCCAGCACAAACCATGTCT +
Preference number: 5 (lower is better)
Translates to: SRGWHEGQIRHRDTGCFPFPPWA*PAQTMS
Trigger: AGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAA...AGGAAAGCATCCTGTGTCCCTGTGCCTTATTTGACCCTCATGCCAACCCCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CAA 90 bp CCAAGGGTCCACCTGAGTCACCCATGTCTCCAAAGATGTCCTTGCGGAAACTGTAGTGCCTCATCCTCTTaGATGTACCCCCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: PRVHLSHPCLQRCPCGNCSASSS*MYPQPV
Trigger: GACTGGCTGGGGGTACATCAAAGAGGATGAGGCACT...ACAGTTTCCGCAAGGACATCTTTGGAGACATGGGTGACTCAGGTGGACCCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR CAA 90 bp TGGGCTGGGAGTGGTGGCAAGGACACTCACGAAGCAGGCATCCTTCCCGCCTTGTTGAGGAAGAGGTGGTaGCACATAGAGTTGTTTATG +
Preference number: 5 (lower is better)
Translates to: WAGSGGKDTHEAGILPALLRKRW*HIELFM
Trigger: CATAAACAACTCTATGTGCAACCACCTCTTCCTCAA...CAAGGCGGGAAGGATGCCTGCTTCGTGAGTGTCCTTGCCACCACTCCCAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CAA 90 bp CCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATCTCCAAAGATGTCCTaGCGGAAACTGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: PNKTEENQGLTWQWPQAASPKMS*RKLYLR
Trigger: CCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGA...TGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CAA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGTTCCCGCCTTGGGCATaGCCAGCACAAACCATGTCT +
Preference number: 5 (lower is better)
Translates to: PLWAISFWIHSKWWLILVFPPWA*PAQTMS
Trigger: AGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAA...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR CAA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGCTTCCCTCATCCTCTTaGATGTACCCCCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: PLWAISFWIHSKWWLILVLPSSS*MYPQPV
Trigger: GACTGGCTGGGGGTACATCAAAGAGGATGAGGGAAG...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR CAA 90 bp TTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGAGTGCCTCATCCTCTTaGATGTACCCCCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: LLPNKTEENQGLTWQWPQSASSS*MYPQPV
Trigger: GACTGGCTGGGGGTACATCAAAGAGGATGAGGCACT...CTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CAA 90 bp CCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTGCATTGAGGAAGAGGTGGTaGCACATAGAGTTGTTTATG +
Preference number: 5 (lower is better)
Translates to: PNKTEENQGLTWQWPQAALRKRW*HIELFM
Trigger: CATAAACAACTCTATGTGCAACCACCTCTTCCTCAA...TGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CAA 90 bp AGTCACCCAGCAGTCTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACATTGCGGAAACTGTACTaGAGGAAGAGGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: SHPAVCPVLKLKCGGLETLRKLY*RKRWLH
Trigger: GTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAA...TGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAGACTGCTGGGTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CAA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGTTGCGGAAACTGTACTaGAGGAAGAGGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: PLWAISFWIHSKWWLILVLRKLY*RKRWLH
Trigger: GTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAA...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR CAA 90 bp CTGTCCGGTTCTCAAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGGATGTTTGCGGAAACTGTACTaGAGGAAGAGGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: LSGSQTQMWRPGDRWAGCLRKLY*RKRWLH
Trigger: GTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAA...ACATCCAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTTGAGAACCGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CAA 90 bp TCCCGGGGTTGGCATGAGGGTCAAATAAGGCACAGGGACACAGGATGCTTTCCTTCTCCAAAGATGTCCTaGCGGAAACTGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: SRGWHEGQIRHRDTGCFPSPKMS*RKLYLR
Trigger: CCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGA...AGGAAAGCATCCTGTGTCCCTGTGCCTTATTTGACCCTCATGCCAACCCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CAA 90 bp AAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGAGTTGGGCATCCTTCCCGCCTaGGGCATTGCCAGCACAAAC +
Preference number: 5 (lower is better)
Translates to: KMSLRKLYLRKRWLHIELGILPA*GIASTN
Trigger: GTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCC...CAACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CAA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGTCTCCAAAGATGTCCTaGCGGAAACTGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: PLWAISFWIHSKWWLILVSPKMS*RKLYLR
Trigger: CCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGA...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR CAA 90 bp TTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTTTGAGGAAGAGGTGGTaGCACATAGAGTTGTTTATG +
Preference number: 5 (lower is better)
Translates to: LPNKTEENQGLTWQWPQALRKRW*HIELFM
Trigger: CATAAACAACTCTATGTGCAACCACCTCTTCCTCAA...AGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CAA 90 bp TCACCAAGGCAATGTCATAGGGTGAATTCCCCAGGTAGCGAGGGCTCAGATAGATCTCCAAAGATGTCCTaGCGGAAACTGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: SPRQCHRVNSPGSEGSDRSPKMS*RKLYLR
Trigger: CCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGA...TCTATCTGAGCCCTCGCTACCTGGGGAATTCACCCTATGACATTGCCTTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CAA 90 bp GCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAAGGCATCCTTCCCGCCTaGGGCATTGCCAGCACAAAC +
Preference number: 5 (lower is better)
Translates to: ALQGINWNVFITKQDRREGILPA*GIASTN
Trigger: GTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCC...TTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000005995.8
ENST00000634351.2
CDS-3UTR CAA 90 bp CGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGAGTTGTTTATGATGGCGCTTCCCTCATCCTCTTaGATGTACCCCCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: RKLYLRKRWLHIELFMMALPSSS*MYPQPV
Trigger: GACTGGCTGGGGGTACATCAAAGAGGATGAGGGAAG...CGCCATCATAAACAACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570594.5
ENST00000634924.1
CDS-3UTR CAA 90 bp CCACTCTGGGCCATCAGCTTCTGGATCCACTCAAAGTGGTGGCTGATATTGGTGTTGAGGAAGAGGTGGTaGCACATAGAGTTGTTTATG +
Preference number: 5 (lower is better)
Translates to: PLWAISFWIHSKWWLILVLRKRW*HIELFM
Trigger: CATAAACAACTCTATGTGCAACCACCTCTTCCTCAA...CACCAATATCAGCCACCACTTTGAGTGGATCCAGAAGCTGATGGCCCAGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574813.5
ENST00000634525.1
CDS-3UTR CAA 90 bp AAACTCAAATGTGGAGGCCTGGAGACAGATGGGCTGGATGTGTTTAGTGTAGGTTTGCGGAAACTGTACTaGAGGAAGAGGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: KLKCGGLETDGLDVFSVGLRKLY*RKRWLH
Trigger: GTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAA...ACCTACACTAAACACATCCAGCCCATCTGTCTCCAGGCCTCCACATTTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CAA 90 bp AATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGTTCCCGCCTTGGGCATaGCCAGCACAAACCATGTCT +
Preference number: 5 (lower is better)
Translates to: NVFITKQDRREPGPDLAVFPPWA*PAQTMS
Trigger: AGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAA...CACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000634351.2
ENST00000635090.1
CDS-3UTR CAA 90 bp CCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACAGTGCCTCATCCTCTTaGATGTACCCCCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: PCKASTGMCLLPNKTEENSASSS*MYPQPV
Trigger: GACTGGCTGGGGGTACATCAAAGAGGATGAGGCACT...GTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CAA 90 bp AAGGGTCCACCTGAGTCACCCATGTCTCCAAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTaGCACATAGAGTTGTTTATG +
Preference number: 5 (lower is better)
Translates to: KGPPESPMSPKMSLRKLYLRKRW*HIELFM
Trigger: CATAAACAACTCTATGTGCAACCACCTCTTCCTCAA...GTACAGTTTCCGCAAGGACATCTTTGGAGACATGGGTGACTCAGGTGGACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570629.5
ENST00000635401.1
CDS-3UTR CAA 90 bp TTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGTTGAGGAAGAGGTGGTaGCACATAGAGTTGTTTATG +
Preference number: 5 (lower is better)
Translates to: LLPNKTEENQGLTWQWPQLRKRW*HIELFM
Trigger: CATAAACAACTCTATGTGCAACCACCTCTTCCTCAA...CTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CAA 90 bp GGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTTGCGGAAACTGTACTaGAGGAAGAGGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: GMCLLPNKTEENQGLTWQLRKLY*RKRWLH
Trigger: GTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAA...CTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS-3UTR CAA 90 bp TGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGATTCCCGCCTTGGGCATaGCCAGCACAAACCATGTCT +
Preference number: 5 (lower is better)
Translates to: CPARHQLECVYYQTRQKRFPPWA*PAQTMS
Trigger: AGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAA...TCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000005995.8
ENST00000634351.2
CDS-3UTR CAA 90 bp AATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAAGTGCCTCATCCTCTTaGATGTACCCCCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: NALQGINWNVFITKQDRRSASSS*MYPQPV
Trigger: GACTGGCTGGGGGTACATCAAAGAGGATGAGGCACT...TCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CAA 90 bp AAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGAGTTTTGCGGAAACTGTACTaGAGGAAGAGGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: KDVLAETVLEEEVVAHRVLRKLY*RKRWLH
Trigger: GTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAA...AACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CAA 90 bp CGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGAGTTGTTTATGATGGCGTCTCCAAAGATGTCCTaGCGGAAACTGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: RKLYLRKRWLHIELFMMASPKMS*RKLYLR
Trigger: CCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGA...CGCCATCATAAACAACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CAA 90 bp ATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTTGCGGAAACTGTACTaGAGGAAGAGGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: INWNVFITKQDRREPGPDLRKLY*RKRWLH
Trigger: GTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAA...GTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CAA 90 bp TTTGAAGAATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGATTCCCGCCTTGGGCATaGCCAGCACAAACCATGTCT +
Preference number: 5 (lower is better)
Translates to: FEECPARHQLECVYYQTRFPPWA*PAQTMS
Trigger: AGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAA...TCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATTCTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000005995.8
ENST00000634351.2
CDS-3UTR CAA 90 bp AAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGAGTTGTTGAGGAAGAGGTGGTaGCACATAGAGTTGTTTATG +
Preference number: 5 (lower is better)
Translates to: KMSLRKLYLRKRWLHIELLRKRW*HIELFM
Trigger: CATAAACAACTCTATGTGCAACCACCTCTTCCTCAA...CAACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CAA 90 bp AGAATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAATTGCGGAAACTGTACTaGAGGAAGAGGTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: RMPCKASTGMCLLPNKTELRKLY*RKRWLH
Trigger: GTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAA...TTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CAA 90 bp ATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTCTCCAAAGATGTCCTaGCGGAAACTGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: INWNVFITKQDRREPGPDSPKMS*RKLYLR
Trigger: CCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGA...GTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CAA 90 bp AAAGATGTCCTTGCGGAAACTGTACTTGAGGAAGAGGTGGTTGCACATAGAGTTTTGAGGAAGAGGTGGTaGCACATAGAGTTGTTTATG +
Preference number: 5 (lower is better)
Translates to: KDVLAETVLEEEVVAHRVLRKRW*HIELFM
Trigger: CATAAACAACTCTATGTGCAACCACCTCTTCCTCAA...AACTCTATGTGCAACCACCTCTTCCTCAAGTACAGTTTCCGCAAGGACATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000570594.5
ENST00000570629.5
ENST00000634924.1
ENST00000635401.1
CDS-3UTR CAA 90 bp CTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGAGAACCATCTCCAAAGATGTCCTaGCGGAAACTGTACTTGAGG +
Preference number: 5 (lower is better)
Translates to: LQGINWNVFITKQDRREPSPKMS*RKLYLR
Trigger: CCTCAAGTACAGTTTCCGCAAGGACATCTTTGGAGA...TGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS-3UTR CAA 90 bp AATGCCCTGCAAGGCATCAACTGGAATGTGTTTATTACCAAACAAGACAGAAGATTGAGGAAGAGGTGGTaGCACATAGAGTTGTTTATG +
Preference number: 5 (lower is better)
Translates to: NALQGINWNVFITKQDRRLRKRW*HIELFM
Trigger: CATAAACAACTCTATGTGCAACCACCTCTTCCTCAA...TCTTCTGTCTTGTTTGGTAATAAACACATTCCAGTTGATGCCTTGCAGGGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000634351.2
ENST00000634454.1
CDS GCA 72 bp CGTCGGCCGCATGGTCCTGATAACGGCGCCGCCTCCTaGGACTCCGGCTTCCTGAGTCCAGCCCGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: RRPHGPDNGAAS*DSGFLSPARAS
Trigger: GCTGGCTCGGGCTGGACTCAGGAAGCCGGAGTCGCAGGAGGCGGCGCCGTTATCAGGACCATGCGGCCGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000570594.5
ENST00000570629.5
ENST00000574813.5
ENST00000634351.2
ENST00000634454.1
ENST00000634525.1
ENST00000634924.1
ENST00000635401.1
CDS GCA 72 bp AGAGAACCAGGGCCTGACTTGGCAGTGGCCCCAGGCTaGATGGGCTCAGGTAGGCTCAGACCGGCCCCAGGA +
Preference number: 6 (lower is better)
Translates to: REPGPDLAVAPG*MGSGRLRPAPG
Trigger: TCCTGGGGCCGGTCTGAGCCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS GCA 72 bp CAGCAGGAAGTAGGTGACACTGGAGATCCTCCCACGTaGTCTGCAGGGCCCGCCCATCCCCCTCCAGCGTCC +
Preference number: 6 (lower is better)
Translates to: QQEVGDTGDPPT*SAGPAHPPPAS
Trigger: GGACGCTGGAGGGGGATGGGCGGGCCCTGCAGAGCACGTGGGAGGATCTCCAGTGTCACCTACTTCCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571141.1
ENST00000634698.1
CDS TCA 72 bp GTCCAGGATCAAGGTGCTGAGCGATGCGGCTGCTGGTaGGGGCTCCTTCCTGGCGAGCAGACCCCCATCTTC +
Preference number: 6 (lower is better)
Translates to: VQDQGAERCGCW*GLLPGEQTPIF
Trigger: GAAGATGGGGGTCTGCTCGCCAGGAAGGAGCCCTCACCAGCAGCCGCATCGCTCAGCACCTTGATCCTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000575739.1
ENST00000635038.1
CDS CCA 72 bp GCGGGATTCCCGGGTTCTGGTTTCTCCAGCCTACCCTaGTGCGTGTGTTGCTCCTTGGCGTCTGGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: AGFPGSGFSSLP*CVCCSLASGSA
Trigger: AGCTGACCCAGACGCCAAGGAGCAACACACGCACCAGGGTAGGCTGGAGAAACCAGAACCCGGGAATCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575739.1
ENST00000635038.1
CDS GCA 72 bp GGATTCCCGGGTTCTGGTTTCTCCAGCCTACCCTGGTaGGTGTGTTGCTCCTTGGCGTCTGGGTCAGCTCAG +
Preference number: 6 (lower is better)
Translates to: GFPGSGFSSLPW*VCCSLASGSAQ
Trigger: CTGAGCTGACCCAGACGCCAAGGAGCAACACACGCACCAGGGTAGGCTGGAGAAACCAGAACCCGGGAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575739.1
ENST00000635038.1
CDS CAA 90 bp CCGGGTTCTGGTTTCTCCAGCCTACCCTGGTGCGTGTGTTGCTCCTaGGCGTCTGGGTCAGCTCAGGCTGCTGTAACACAAATCCCACGC +
Preference number: 6 (lower is better)
Translates to: PGSGFSSLPWCVCCS*ASGSAQAAVTQIPR
Trigger: GCGTGGGATTTGTGTTACAGCAGCCTGAGCTGACCCAGACGCCAAGGAGCAACACACGCACCAGGGTAGGCTGGAGAAACCAGAACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575739.1
ENST00000635038.1
CDS GCA 72 bp GGTTCTGGTTTCTCCAGCCTACCCTGGTGCGTGTGTTaGTCCTTGGCGTCTGGGTCAGCTCAGGCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: GSGFSSLPWCVC*SLASGSAQAAV
Trigger: TACAGCAGCCTGAGCTGACCCAGACGCCAAGGAGCAACACACGCACCAGGGTAGGCTGGAGAAACCAGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575739.1
ENST00000635038.1
CDS CCA 72 bp AACAAGACAGAAGAGAACCAGGGCCTGACTTGGCAGTaGCCCCAGGCTGCATGGGCTCAGGTAGGCTCAGAC +
Preference number: 6 (lower is better)
Translates to: NKTEENQGLTWQ*PQAAWAQVGSD
Trigger: GTCTGAGCCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS CAA 90 bp GGGATTCCCGGGTTCTGGTTTCTCCAGCCTACCCTGGTGCGTGTGTaGCTCCTTGGCGTCTGGGTCAGCTCAGGCTGCTGTAACACAAAT +
Preference number: 6 (lower is better)
Translates to: GIPGFWFLQPTLVRV*LLGVWVSSGCCNTN
Trigger: ATTTGTGTTACAGCAGCCTGAGCTGACCCAGACGCCAAGGAGCAACACACGCACCAGGGTAGGCTGGAGAAACCAGAACCCGGGAATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575739.1
ENST00000635038.1
CDS CCA 72 bp CCACCTGAGTCACCGAAGCAGGCATCCTTCCCGCCTTaGGCATTGCCAGCACAAACCATGTCTCCAAAGATG +
Preference number: 6 (lower is better)
Translates to: PPESPKQASFPP*ALPAQTMSPKM
Trigger: CATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGGTGACTCAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000574813.5
ENST00000634351.2
ENST00000634525.1
ENST00000635090.1
CDS CAA 72 bp ATCCCACGCCGTGGGCGGCTGGTAGATGATAGAGGTTaGTTTCTCACAGCTCTGGAGGCTGGAAGTCCAGGA +
Preference number: 6 (lower is better)
Translates to: IPRRGRLVDDRG*FLTALEAGSPG
Trigger: TCCTGGACTTCCAGCCTCCAGAGCTGTGAGAAACAAACCTCTATCATCTACCAGCCGCCCACGGCGTGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575739.1
ENST00000635038.1
CDS GCA 72 bp AGTCACCGAAGCAGGCATCCTTCCCGCCTTGGGCATTaGCAGCACAAACCATGTCTCCAAAGATGTCCTTGC +
Preference number: 6 (lower is better)
Translates to: SHRSRHPSRLGH*QHKPCLQRCPC
Trigger: GCAAGGACATCTTTGGAGACATGGTTTGTGCTGGCAATGCCCAAGGCGGGAAGGATGCCTGCTTCGGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000574265.1
ENST00000574813.5
ENST00000634351.2
ENST00000634525.1
ENST00000635090.1
CDS CAA 90 bp AATGTGTTTATTACCAAACAAGACAGAAGAGAACCAGGGCCTGACTaGGCAGTGGCCCCAGGCTGCATGGGCTCAGGTAGGCTCAGACCG +
Preference number: 6 (lower is better)
Translates to: NVFITKQDRREPGPD*AVAPGCMGSGRLRP
Trigger: CGGTCTGAGCCTACCTGAGCCCATGCAGCCTGGGGCCACTGCCAAGTCAGGCCCTGGTTCTCTTCTGTCTTGTTTGGTAATAAACACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000005995.8
ENST00000450020.7
ENST00000574265.1
ENST00000634351.2
ENST00000634454.1
ENST00000635090.1
CDS CAA 90 bp GTAACACAAATCCCACGCCGTGGGCGGCTGGTAGATGATAGAGGTTaGTTTCTCACAGCTCTGGAGGCTGGAAGTCCAGGATCAAGGTGC +
Preference number: 6 (lower is better)
Translates to: VTQIPRRGRLVDDRG*FLTALEAGSPGSRC
Trigger: GCACCTTGATCCTGGACTTCCAGCCTCCAGAGCTGTGAGAAACAAACCTCTATCATCTACCAGCCGCCCACGGCGTGGGATTTGTGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575739.1
ENST00000635038.1