RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRSS16 (Homo sapiens)

Ensembl gene IDs: ENSG00000112812

Ensembl transcript IDs: ENST00000230582.8, ENST00000377456.6, ENST00000421826.6, ENST00000454665.6, ENST00000459736.5, ENST00000462664.4, ENST00000466364.2, ENST00000468138.5, ENST00000468930.5, ENST00000470870.5, ENST00000471463.5, ENST00000475106.2, ENST00000478690.5, ENST00000481125.5, ENST00000484493.5, ENST00000485603.1, ENST00000485993.4, ENST00000488649.5, ENST00000492575.5, ENST00000495683.5

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCAGCTGTGCCACTGTCTCTGCTCGGGAAAAGCTTAAACACTTCTaGCCCAGGCTGTGCAAGACAATGCAAGGCGGCTGGACAAGAAGC +
Preference number: 1 (lower is better)
Translates to: LSCATVSAREKLKHF*PRLCKTMQGGWTRS
Trigger: GCTTCTTGTCCAGCCGCCTTGCATTGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTTTTCCCGAGCAGAGACAGTGGCACAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468930.5
3UTR CCA 90 bp CAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTaGCAGAATTTGAACCAGAATCTGATCAGCAGGGCGAGGGCACCA +
Preference number: 1 (lower is better)
Translates to: QKKKLTAKPLTQELE*QNLNQNLISRARAP
Trigger: TGGTGCCCTCGCCCTGCTGATCAGATTCTGGTTCAAATTCTGCCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
3UTR-3UTR GCA 90 bp AGCTGCTGGAAGATGTTCTGGCGCCCTAGGCGGAGGCTGGGGGAGTCTGAGGGCGAGAGCCCAAACACCTaGTCACATAGGTCTAGCTGG +
Preference number: 2 (lower is better)
Translates to: SCWKMFWRPRRRLGESEGESPNT*SHRSSW
Trigger: CCAGCTAGACCTATGTGAGCAGGTGTTTGGGCTCTC...GCCCTCAGACTCCCCCAGCCTCCGCCTAGGGCGCCAGAACATCTTCCAGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454665.6
3UTR CAA 90 bp GGTACATGTCTGATACAACCACTGCCGGTCACCCACACCAGACAGTaGAGGTTCTGTGCTCCTCAGCTGTGCCACTGTCTCTGCTCGGGA +
Preference number: 2 (lower is better)
Translates to: GTCLIQPLPVTHTRQ*RFCAPQLCHCLCSG
Trigger: TCCCGAGCAGAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGTGACCGGCAGTGGTTGTATCAGACATGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
3UTR-3UTR CCA 90 bp CCCTTAATCTGGCTCTCCTTTGCCAGCTTGAGCCAGGTCTGTAGCTGCTGGAAGGCCATGTCCAAGCAGTaGGAGCCAGTGCGGATAAGA +
Preference number: 2 (lower is better)
Translates to: PLIWLSFASLSQVCSCWKAMSKQ*EPVRIR
Trigger: TCTTATCCGCACTGGCTCCCACTGCTTGGACATGGC...CTTCCAGCAGCTACAGACCTGGCTCAAGCTGGCAAAGGAGAGCCAGATTAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
3UTR-3UTR TCA 90 bp CAGGAGCTGGAGTGGCAGAATTTGAACCAGAATCTGATCAGCAGGGCGAGGGCAGTGCGGAACAGGTGCTaGATTCCAATTCCTGGGAGT +
Preference number: 2 (lower is better)
Translates to: QELEWQNLNQNLISRARAVRNRC*IPIPGS
Trigger: ACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCAC...TGCCCTCGCCCTGCTGATCAGATTCTGGTTCAAATTCTGCCACTCCAGCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
3UTR-3UTR TCA 90 bp GCCATGTCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATTGTCCAGGACTGAGGTaGCCATGCAGGGAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: AMSKQWEPVRIRRVDSEDCPGLR*PCREWK
Trigger: TTTCCACTCCCTGCATGGTCACCTCAGTCCTGGACA...ATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGACATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
3UTR-3UTR TCA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGGTGCGGAACAGGTGCTaGATTCCAATTCCTGGGAGT +
Preference number: 2 (lower is better)
Translates to: GLALSSQALEEGISTRIMVRNRC*IPIPGS
Trigger: ACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCAC...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
3UTR CAA 90 bp TATGAGATTCAGACTTCACCCTTAATCTGGCTCTCCTTTGCCAGCTaGAGCCAGGTCTGTAGCTGCTGGAAGATGTTCTGGCGCCCTAGG +
Preference number: 2 (lower is better)
Translates to: YEIQTSPLIWLSFAS*SQVCSCWKMFWRPR
Trigger: CCTAGGGCGCCAGAACATCTTCCAGCAGCTACAGACCTGGCTCAAGCTGGCAAAGGAGAGCCAGATTAAGGGTGAAGTCTGAATCTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
3UTR-3UTR GCA 90 bp GCCATGTCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATGTTACACTTAGCACATaGCAGGGGTCTGTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: AMSKQWEPVRIRRVDSEDVTLST*QGSVSP
Trigger: TGGGGACACAGACCCCTGGCATGTGCTAAGTGTAAC...ATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGACATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
3UTR-3UTR GCA 90 bp CTCACAGGTGACATAGAAGCCGAACTCGGTACATGTCTGATACAACCACTGCCGACAGTTGAGGTTCTGTaGTCCTCAGCTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: LTGDIEAELGTCLIQPLPTVEVL*SSAVPL
Trigger: CAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGT...CGGCAGTGGTTGTATCAGACATGTACCGAGTTCGGCTTCTATGTCACCTGTGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468930.5
3UTR-3UTR CCA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGCCTAGAGTTGGAAGCTaGAAGTACCAGGGAGTGATA +
Preference number: 2 (lower is better)
Translates to: GLALSSQALEEGISTRIMPRVGS*KYQGVI
Trigger: TATCACTCCCTGGTACTTCCAGCTTCCAACTCTAGG...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
3UTR-3UTR GCA 90 bp TGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTGTTACACTTAGCACATaGCAGGGGTCTGTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: WEPVRIRRVDSEDPKACVVTLST*QGSVSP
Trigger: TGGGGACACAGACCCCTGGCATGTGCTAAGTGTAAC...AACACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
3UTR-3UTR CCA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTGGCAGTGCTGGGAGCTaGGAGAAAGGACATCTGGGA +
Preference number: 2 (lower is better)
Translates to: DQQGEGTSISHICLTFNIGSAGS*EKGHLG
Trigger: TCCCAGATGTCCTTTCTCCCAGCTCCCAGCACTGCC...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
3UTR-3UTR TCA 90 bp CAGGAGCTGGAGTGGCAGAATTTGAACCAGAATCTGATCAGCAGGGCGAGGGCACTTTCTTTTGTTCAGTaGACAAGTATGTCCAGGACT +
Preference number: 2 (lower is better)
Translates to: QELEWQNLNQNLISRARALSFVQ*TSMSRT
Trigger: AGTCCTGGACATACTTGTTCACTGAACAAAAGAAAG...TGCCCTCGCCCTGCTGATCAGATTCTGGTTCAAATTCTGCCACTCCAGCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
3UTR-3UTR GCA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGCACATGCCAATTACGTaGGGAACAGGTGCTGAATTC +
Preference number: 2 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWHMPIT*GTGAEF
Trigger: GAATTCAGCACCTGTTCCGCACGTAATTGGCATGTG...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
3UTR-3UTR GCA 90 bp TCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAACACATGCCAATTACGTaGGGAACAGGTGCTGAATTC +
Preference number: 2 (lower is better)
Translates to: SKQWEPVRIRRVDSEDPKHMPIT*GTGAEF
Trigger: GAATTCAGCACCTGTTCCGCACGTAATTGGCATGTG...TTTAGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
3UTR-3UTR CCA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGCTGAATTCCAATTCCTaGGAGTTTCTTCTTTCAAAA +
Preference number: 2 (lower is better)
Translates to: GLALSSQALEEGISTRIMLNSNS*EFLLSK
Trigger: TTTTGAAAGAAGAAACTCCCAGGAATTGGAATTCAG...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
3UTR-3UTR TCA 90 bp GTTGCCTCTTACCCACAAGGAAATATGAAACTGGATAAAACTCTAAAACTACCATGTCCAGGACTGAGGTaGCCATGCAGGGAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: VASYPQGNMKLDKTLKLPCPGLR*PCREWK
Trigger: TTTCCACTCCCTGCATGGTCACCTCAGTCCTGGACA...TGGTAGTTTTAGAGTTTTATCCAGTTTCATATTTCCTTGTGGGTAAGAGGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230582.8
3UTR-3UTR TCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTATGTCCAGGACTGAGGTaGCCATGCAGGGAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLCPGLR*PCREWK
Trigger: TTTCCACTCCCTGCATGGTCACCTCAGTCCTGGACA...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
3UTR-3UTR GCA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTGGGAATAAGGATGTTTaGAGACACATGCCAATTACG +
Preference number: 2 (lower is better)
Translates to: DQQGEGTSISHICLTFNIGNKDV*RHMPIT
Trigger: CGTAATTGGCATGTGTCTGCAAACATCCTTATTCCC...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
3UTR-3UTR TCA 90 bp CACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGGAACTTTCTTTTGTTCAGTaGACAAGTATGTCCAGGACT +
Preference number: 2 (lower is better)
Translates to: HFKLGIRMFADTCQLRAELSFVQ*TSMSRT
Trigger: AGTCCTGGACATACTTGTTCACTGAACAAAAGAAAG...TTCCGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
3UTR-3UTR TCA 90 bp GTTGCCTCTTACCCACAAGGAAATATGAAACTGGATAAAACTCTAAAACTACCACCAGGGAGTGATATTTaGTTGTGGGAAAAGATGGTG +
Preference number: 2 (lower is better)
Translates to: VASYPQGNMKLDKTLKLPPGSDI*LWEKMV
Trigger: CACCATCTTTTCCCACAATCAAATATCACTCCCTGG...TGGTAGTTTTAGAGTTTTATCCAGTTTCATATTTCCTTGTGGGTAAGAGGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230582.8
3UTR-3UTR GCA 90 bp GTTGCCTCTTACCCACAAGGAAATATGAAACTGGATAAAACTCTAAAACTACCAATGTTTGCAGACACATaGCAATTACGTGCGGAACAG +
Preference number: 2 (lower is better)
Translates to: VASYPQGNMKLDKTLKLPMFADT*QLRAEQ
Trigger: CTGTTCCGCACGTAATTGGCATGTGTCTGCAAACAT...TGGTAGTTTTAGAGTTTTATCCAGTTTCATATTTCCTTGTGGGTAAGAGGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230582.8
3UTR-3UTR GCA 90 bp GTTGCCTCTTACCCACAAGGAAATATGAAACTGGATAAAACTCTAAAACTACCAGGGAATAAGGATGTTTaGAGACACATGCCAATTACG +
Preference number: 2 (lower is better)
Translates to: VASYPQGNMKLDKTLKLPGNKDV*RHMPIT
Trigger: CGTAATTGGCATGTGTCTGCAAACATCCTTATTCCC...TGGTAGTTTTAGAGTTTTATCCAGTTTCATATTTCCTTGTGGGTAAGAGGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230582.8
3UTR-3UTR CCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACTGAATTCCAATTCCTaGGAGTTTCTTCTTTCAAAA +
Preference number: 2 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLLNSNS*EFLLSK
Trigger: TTTTGAAAGAAGAAACTCCCAGGAATTGGAATTCAG...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
3UTR GCA 72 bp TGGCTCTCCTTTGCCAGCTTGAGCCAGGTCTGTAGCTaGTGGAAGATGTTCTGGCGCCCTAGGCGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: WLSFASLSQVCS*WKMFWRPRRRL
Trigger: CAGCCTCCGCCTAGGGCGCCAGAACATCTTCCAGCAGCTACAGACCTGGCTCAAGCTGGCAAAGGAGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
3UTR CCA 72 bp CAAGACAATGCAAGGCGGCTGGACAAGAAGCGGAGCTaGGCCATTTCCAGGCCTCCAGCAGGTATACTCAGG +
Preference number: 3 (lower is better)
Translates to: QDNARRLDKKRS*AISRPPAGILR
Trigger: CCTGAGTATACCTGCTGGAGGCCTGGAAATGGCCCAGCTCCGCTTCTTGTCCAGCCGCCTTGCATTGTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468930.5
3UTR CCA 72 bp GCCACTGTCTCTGCTCGGGAAAAGCTTAAACACTTCTaGCCCAGGCTGTGCAAGACAATGCAAGGCGGCTGG +
Preference number: 3 (lower is better)
Translates to: ATVSAREKLKHF*PRLCKTMQGGW
Trigger: CCAGCCGCCTTGCATTGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTTTTCCCGAGCAGAGACAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468930.5
3UTR-3UTR CAA 90 bp CAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTTTAACAAACAGCACTTaGTTAGCCCCAGGGGTCTGG +
Preference number: 3 (lower is better)
Translates to: QWEPVRIRRVDSEDPKACLTNST*LAPGVW
Trigger: CCAGACCCCTGGGGCTAACAAAGTGCTGTTTGTTAA...ACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
3UTR GCA 72 bp TCTGAGGATCCTAAAGCCTGTGTTACACTTAGCACATaGCAGGGGTCTGTGTCCCCATTAACAAACAGCACT +
Preference number: 3 (lower is better)
Translates to: SEDPKACVTLST*QGSVSPLTNST
Trigger: AGTGCTGTTTGTTAATGGGGACACAGACCCCTGGCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
3UTR-3UTR CAA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGACAAGCTGCTTTCTTTaGTTCAGTGAACAAGTATGT +
Preference number: 3 (lower is better)
Translates to: GLALSSQALEEGISTRIMTSCFL*FSEQVC
Trigger: ACATACTTGTTCACTGAACAAAAGAAAGCAGCTTGT...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
3UTR TCA 72 bp CTTTTGTTCAGTGAACAAGTATGTCCAGGACTGAGGTaGCCATGCAGGGAGTGGAAAGGGTATGAGATTCAG +
Preference number: 3 (lower is better)
Translates to: LLFSEQVCPGLR*PCREWKGYEIQ
Trigger: CTGAATCTCATACCCTTTCCACTCCCTGCATGGTCACCTCAGTCCTGGACATACTTGTTCACTGAACAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454665.6
3UTR GCA 72 bp GGGAATAAGGATGTTTGCAGACACATGCCAATTACGTaGGGAACAGGTGCTGAATTCCAATTCCTGGGAGTT +
Preference number: 3 (lower is better)
Translates to: GNKDVCRHMPIT*GTGAEFQFLGV
Trigger: AACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
3UTR TCA 72 bp TTGCAGACACATGCCAATTACGTGCGGAACAGGTGCTaGATTCCAATTCCTGGGAGTTTCTTCTTTCAAAAC +
Preference number: 3 (lower is better)
Translates to: LQTHANYVRNRC*IPIPGSFFFQN
Trigger: GTTTTGAAAGAAGAAACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
3UTR TCA 72 bp GATCAAGAACAGGCAGAACTAAAGTGTAGTGGAGATTaGCTTTGGTATGACAGCATGAGGAGGTTGCCTCTT +
Preference number: 3 (lower is better)
Translates to: DQEQAELKCSGD*LWYDSMRRLPL
Trigger: AAGAGGCAACCTCCTCATGCTGTCATACCAAAGTCAATCTCCACTACACTTTAGTTCTGCCTGTTCTTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230582.8
3UTR-3UTR CAA 90 bp AGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCACATGCCAGACAAGCTGCTTTCTTTaGTTCAGTGAACAAGTATGT +
Preference number: 3 (lower is better)
Translates to: RRVDSEDPKACVTLSTCQTSCFL*FSEQVC
Trigger: ACATACTTGTTCACTGAACAAAAGAAAGCAGCTTGT...CTGGCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATCAACTCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
3UTR-3UTR CAA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTAACAAGCTGCTTTCTTTaGTTCAGTGAACAAGTATGT +
Preference number: 3 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLTSCFL*FSEQVC
Trigger: ACATACTTGTTCACTGAACAAAAGAAAGCAGCTTGT...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp TCTGATACAACCACTGCCGGTCACCCACACCAGACAGTTGAGGTTCTGTGCTCCCAGGGCGCCCCAGGCTaGGGCCAAGGCTGCGGGATG +
Preference number: 4 (lower is better)
Translates to: SDTTTAGHPHQTVEVLCSQGAPG*GQGCGM
Trigger: CATCCCGCAGCCTTGGCCCCAGCCTGGGGCGCCCTG...GGAGCACAGAACCTCAACTGTCTGGTGTGGGTGACCGGCAGTGGTTGTATCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR CCA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGCAGGGCGCCCCAGGCTaGGGCCAAGGCTGCGGGATG +
Preference number: 4 (lower is better)
Translates to: GLALSSQALEEGISTRIMQGAPG*GQGCGM
Trigger: CATCCCGCAGCCTTGGCCCCAGCCTGGGGCGCCCTG...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR GCA 90 bp CACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCCACTGTCTCTGCTCGGGAGCCAGGCCCAAGGCTaGCCTCACCCCCTAGATGCA +
Preference number: 4 (lower is better)
Translates to: HQTVEVLCSSAVPLSLLGSQAQG*PHPLDA
Trigger: TGCATCTAGGGGGTGAGGGCAGCCTTGGGCCTGGCT...CCCGAGCAGAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470870.5
CDS-3UTR CCA 90 bp TACATGTCTGATACAACCACTGCCGGTCACCCACACCAGACAGTTGAGGTTCTGCAGGGCGCCCCAGGCTaGGGCCAAGGCTGCGGGATG +
Preference number: 4 (lower is better)
Translates to: YMSDTTTAGHPHQTVEVLQGAPG*GQGCGM
Trigger: CATCCCGCAGCCTTGGCCCCAGCCTGGGGCGCCCTG...CAGAACCTCAACTGTCTGGTGTGGGTGACCGGCAGTGGTTGTATCAGACATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR TCA 90 bp ACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCCACTGTCTCTGCTCGGGAATGGCCTCTCATCACTaGGCCAGGCCCAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TRQLRFCAPQLCHCLCSGMASHH*ARPKAA
Trigger: GGCAGCCTTGGGCCTGGCTCAGTGATGAGAGGCCAT...TCCCGAGCAGAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470870.5
CDS-3UTR GCA 90 bp ACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCCACTGTCTCTGCTCGGGACACTTTTGGGAGGGCTaGAGCACCTGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TRQLRFCAPQLCHCLCSGHFWEG*STWPQA
Trigger: AGCCTGGGGCCAGGTGCTGCAGCCCTCCCAAAAGTG...TCCCGAGCAGAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR CCA 90 bp CAGGAGCTGGAGTGGCAGAATTTGAACCAGAATCTGATCAGCAGGGCGAGGGCAAGAGGGCCCAGCCACTaGGCAAGCCAGACGGCCATG +
Preference number: 4 (lower is better)
Translates to: QELEWQNLNQNLISRARARGPSH*ASQTAM
Trigger: CATGGCCGTCTGGCTTGCCCAGTGGCTGGGCCCTCT...TGCCCTCGCCCTGCTGATCAGATTCTGGTTCAAATTCTGCCACTCCAGCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp GTCACCCACACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCCACTGTCTCCAGCCACCCCACTTTTaGGAGGGCTGCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: VTHTRQLRFCAPQLCHCLQPPHF*EGCSTW
Trigger: CCAGGTGCTGCAGCCCTCCCAAAAGTGGGGTGGCTG...GAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR CCA 90 bp CCACTGCCGGTCACCCACACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCGACAAGAAGCGGAGCTaGGCCATTTCCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PLPVTHTRQLRFCAPQLCDKKRS*AISRPP
Trigger: TGGAGGCCTGGAAATGGCCCAGCTCCGCTTCTTGTC...GCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGTGACCGGCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR CCA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGGCCCTAGGCGGAGGCTaGGGGAGTCTGAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GLALSSQALEEGISTRIMALGGG*GSLRAS
Trigger: AGAGGCCCTCAGACTCCCCCAGCCTCCGCCTAGGGC...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR TCA 90 bp CACTTTGTTAGCCCCAGGGGTCTGGCCACCGTAGTAGGAGTTCGTCTGAGCCACGTCTGTCGGACACGTTaGAGGGGTCCAGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: HFVSPRGLATVVGVRLSHVCRTR*RGPAVA
Trigger: AGCAACTGCTGGACCCCTTCAACGTGTCCGACAGAC...GTGGCTCAGACGAACTCCTACTACGGTGGCCAGACCCCTGGGGCTAACAAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR TCA 90 bp GGCTGTGCAAGACAATGCAAGGCGGCTGGACAAGAAGCGGAGCTGGGCCATTTCCCCACACCAGACAGTTaGGGTTCTGTGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GCARQCKAAGQEAELGHFPTPDS*GSVLLS
Trigger: GCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGG...GAAATGGCCCAGCTCCGCTTCTTGTCCAGCCGCCTTGCATTGTCTTGCACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468930.5
CDS-3UTR GCA 90 bp GACACATGCCAATTACGTGCGGAACAGGTGCTGAATTCCAATTCCTGGGAGTTTAGGGCGTGGAGTGGCTaGGGTTGCCCCCGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: DTCQLRAEQVLNSNSWEFRAWSG*GCPRPR
Trigger: TCGGGGGCGGGGGCAACCGCAGCCACTCCACGCCCT...AAACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR GCA 90 bp CACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCCACTGTCTCTGCTCGGGTTCTGGCCCAGGCTGTaGAAGACAATGCAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: HQTVEVLCSSAVPLSLLGFWPRL*KTMQGG
Trigger: GCCGCCTTGCATTGTCTTGCACAGCCTGGGCCAGAA...CCCGAGCAGAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR CCA 90 bp GGCCCTGGAAGAAGGAATCTCCACCAGAATCATGAATCCCTAGAGTTGGAAGCTGCCCGCAGTAGGGCGTaGAGTGGCTGCGGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: GPGRRNLHQNHESLELEAARSRA*SGCGCP
Trigger: GGGGCAACCGCAGCCACTCCACGCCCTACTGCGGGC...AGCTTCCAACTCTAGGGATTCATGATTCTGGTGGAGATTCCTTCTTCCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR CCA 90 bp AGCTGCTGGAAGATGTTCTGGCGCCCTAGGCGGAGGCTGGGGGAGTCTGAGGGCAAGCTTAAACACTTCTaGCCCAGGCTGTGCAAGACA +
Preference number: 4 (lower is better)
Translates to: SCWKMFWRPRRRLGESEGKLKHF*PRLCKT
Trigger: TGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTT...GCCCTCAGACTCCCCCAGCCTCCGCCTAGGGCGCCAGAACATCTTCCAGCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR CCA 90 bp GCCATGTCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATGCCCTAGGCGGAGGCTaGGGGAGTCTGAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: AMSKQWEPVRIRRVDSEDALGGG*GSLRAS
Trigger: AGAGGCCCTCAGACTCCCCCAGCCTCCGCCTAGGGC...ATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGACATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR CCA 90 bp GCCGAACTCGGTACATGTCTGATACAACCACTGCCGGTCACCCACACCAGACAGGCCAAGGCTGCGGGATaGCCTGTAGGAAGGATCGTC +
Preference number: 4 (lower is better)
Translates to: AELGTCLIQPLPVTHTRQAKAAG*PVGRIV
Trigger: GACGATCCTTCCTACAGGCCATCCCGCAGCCTTGGC...CTGTCTGGTGTGGGTGACCGGCAGTGGTTGTATCAGACATGTACCGAGTTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468930.5
CDS-3UTR TCA 90 bp ACAAGAAGCGGAGCTGGGCCATTTCCAGGCCTCCAGCAGGTATACTCAGGCCATGTCTGTCGGACACGTTaGAGGGGTCCAGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: TRSGAGPFPGLQQVYSGHVCRTR*RGPAVA
Trigger: AGCAACTGCTGGACCCCTTCAACGTGTCCGACAGAC...ATGGCCTGAGTATACCTGCTGGAGGCCTGGAAATGGCCCAGCTCCGCTTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468930.5
CDS-3UTR TCA 90 bp ACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCCACTGTCTCTGCTCGGGAGTCTGTCGGACACGTTaGAGGGGTCCAGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: TRQLRFCAPQLCHCLCSGVCRTR*RGPAVA
Trigger: AGCAACTGCTGGACCCCTTCAACGTGTCCGACAGAC...TCCCGAGCAGAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR GCA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGCACTTTTGGGAGGGCTaGAGCACCTGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GLALSSQALEEGISTRIMHFWEG*STWPQA
Trigger: AGCCTGGGGCCAGGTGCTGCAGCCCTCCCAAAAGTG...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR GCA 90 bp AGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCCACTGTCTCTGCTCGGGAAAACACTTTTGGGAGGGCTaGAGCACCTGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RQLRFCAPQLCHCLCSGKHFWEG*STWPQA
Trigger: AGCCTGGGGCCAGGTGCTGCAGCCCTCCCAAAAGTG...TTTTCCCGAGCAGAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR GCA 90 bp CACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCCACTGTCTCTGCTCGGGAAGGGGTCCAGCAGTTaGTCCAGCCACCCCACTTTT +
Preference number: 4 (lower is better)
Translates to: HQTVEVLCSSAVPLSLLGKGSSS*SSHPTF
Trigger: AAAAGTGGGGTGGCTGGAGCAACTGCTGGACCCCTT...CCCGAGCAGAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR GCA 90 bp CCACTGCCGGTCACCCACACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCACAGTTGAGGTTCTGTaGTCCTCAGCTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: PLPVTHTRQLRFCAPQLCTVEVL*SSAVPL
Trigger: CAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGT...GCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGTGACCGGCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR GCA 90 bp TGTGCAAGACAATGCAAGGCGGCTGGACAAGAAGCGGAGCTGGGCCATTTCCAGTTCTGGCCCAGGCTGTaGAAGACAATGCAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: CARQCKAAGQEAELGHFQFWPRL*KTMQGG
Trigger: GCCGCCTTGCATTGTCTTGCACAGCCTGGGCCAGAA...CTGGAAATGGCCCAGCTCCGCTTCTTGTCCAGCCGCCTTGCATTGTCTTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468930.5
CDS-3UTR CCA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGCAGCCACCCCACTTTTaGGAGGGCTGCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: GLALSSQALEEGISTRIMQPPHF*EGCSTW
Trigger: CCAGGTGCTGCAGCCCTCCCAAAAGTGGGGTGGCTG...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR CCA 90 bp CAGCACTTTGTTAGCCCCAGGGGTCTGGCCACCGTAGTAGGAGTTCGTCTGAGCCAGGTCTGTAGCTGCTaGAAGATGTTCTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: QHFVSPRGLATVVGVRLSQVCSC*KMFWRP
Trigger: AGGGCGCCAGAACATCTTCCAGCAGCTACAGACCTG...GCTCAGACGAACTCCTACTACGGTGGCCAGACCCCTGGGGCTAACAAAGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR CCA 90 bp CACCCACACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCCACTGTCTCTGACAATGCAAGGCGGCTaGACAAGAAGCGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HPHQTVEVLCSSAVPLSLTMQGG*TRSGAG
Trigger: CCCAGCTCCGCTTCTTGTCCAGCCGCCTTGCATTGT...CAGAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR CCA 90 bp ACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCCACTGTCTCTGCTCGGGAACAATGCAAGGCGGCTaGACAAGAAGCGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TRQLRFCAPQLCHCLCSGTMQGG*TRSGAG
Trigger: CCCAGCTCCGCTTCTTGTCCAGCCGCCTTGCATTGT...TCCCGAGCAGAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR TCA 90 bp CAGCACTTTGTTAGCCCCAGGGGTCTGGCCACCGTAGTAGGAGTTCGTCTGAGCGTGCGGAACAGGTGCTaGATTCCAATTCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: QHFVSPRGLATVVGVRLSVRNRC*IPIPGS
Trigger: ACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCAC...GCTCAGACGAACTCCTACTACGGTGGCCAGACCCCTGGGGCTAACAAAGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR GCA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGAAAGAGGCGGGAAAGTaGCAGGCGGGCAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: GLALSSQALEEGISTRIMKEAGK*QAGRDH
Trigger: GTGGTCTCTGCCCGCCTGGCACTTTCCCGCCTCTTT...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR CCA 90 bp TACATGTCTGATACAACCACTGCCGGTCACCCACACCAGACAGTTGAGGTTCTGCAGCCACCCCACTTTTaGGAGGGCTGCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: YMSDTTTAGHPHQTVEVLQPPHF*EGCSTW
Trigger: CCAGGTGCTGCAGCCCTCCCAAAAGTGGGGTGGCTG...CAGAACCTCAACTGTCTGGTGTGGGTGACCGGCAGTGGTTGTATCAGACATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR CCA 90 bp AGCTGTGCCACTGTCTCTGCTCGGGAAAAGCTTAAACACTTCTGGCCCAGGCTGGACAAGAAGCGGAGCTaGGCCATTTCCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SCATVSAREKLKHFWPRLDKKRS*AISRPP
Trigger: TGGAGGCCTGGAAATGGCCCAGCTCCGCTTCTTGTC...CAGCCTGGGCCAGAAGTGTTTAAGCTTTTCCCGAGCAGAGACAGTGGCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468930.5
CDS-3UTR CCA 90 bp CCCTTAATCTGGCTCTCCTTTGCCAGCTTGAGCCAGGTCTGTAGCTGCTGGAAGGGCAGTGCTGGGAGCTaGGAGAAAGGACATCTGGGA +
Preference number: 4 (lower is better)
Translates to: PLIWLSFASLSQVCSCWKGSAGS*EKGHLG
Trigger: TCCCAGATGTCCTTTCTCCCAGCTCCCAGCACTGCC...CTTCCAGCAGCTACAGACCTGGCTCAAGCTGGCAAAGGAGAGCCAGATTAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR CCA 90 bp GACACATGCCAATTACGTGCGGAACAGGTGCTGAATTCCAATTCCTGGGAGTTTGCCCTAGGCGGAGGCTaGGGGAGTCTGAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: DTCQLRAEQVLNSNSWEFALGGG*GSLRAS
Trigger: AGAGGCCCTCAGACTCCCCCAGCCTCCGCCTAGGGC...AAACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
3UTR CAA 72 bp GCAAAGCCCCTAACCCAGGAGCTGGAGTGGCAGAATTaGAACCAGAATCTGATCAGCAGGGCGAGGGCACCA +
Preference number: 4 (lower is better)
Translates to: AKPLTQELEWQN*NQNLISRARAP
Trigger: TGGTGCCCTCGCCCTGCTGATCAGATTCTGGTTCAAATTCTGCCACTCCAGCTCCTGGGTTAGGGGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
3UTR CAA 72 bp CTGATACAACCACTGCCGGTCACCCACACCAGACAGTaGAGGTTCTGTGCTCCTCAGCTGTGCCACTGTCTC +
Preference number: 4 (lower is better)
Translates to: LIQPLPVTHTRQ*RFCAPQLCHCL
Trigger: GAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGTGACCGGCAGTGGTTGTATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR TCA 90 bp ACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCCACTGTCTCTGCTCGGGATGGGATTCTCACAGGTaGCATAGAAGCCGAACTCGG +
Preference number: 4 (lower is better)
Translates to: TRQLRFCAPQLCHCLCSGWDSHR*HRSRTR
Trigger: CCGAGTTCGGCTTCTATGTCACCTGTGAGAATCCCA...TCCCGAGCAGAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468930.5
CDS-3UTR GCA 90 bp CAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTCACTTTTGGGAGGGCTaGAGCACCTGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QWEPVRIRRVDSEDPKACHFWEG*STWPQA
Trigger: AGCCTGGGGCCAGGTGCTGCAGCCCTCCCAAAAGTG...ACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR GCA 90 bp ATGTCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTCACTTTTGGGAGGGCTaGAGCACCTGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: MSKQWEPVRIRRVDSEDPHFWEG*STWPQA
Trigger: AGCCTGGGGCCAGGTGCTGCAGCCCTCCCAAAAGTG...AGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR GCA 90 bp AGCCGAACTCGGTACATGTCTGATACAACCACTGCCGGTCACCCACACCAGACACCCTCACCCCCTAGATaGAGGAATATGGGTCCATCC +
Preference number: 4 (lower is better)
Translates to: SRTRYMSDTTTAGHPHQTPSPPR*RNMGPS
Trigger: GGATGGACCCATATTCCTGCATCTAGGGGGTGAGGG...TGTCTGGTGTGGGTGACCGGCAGTGGTTGTATCAGACATGTACCGAGTTCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470870.5
CDS-3UTR GCA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGCAGCTCCGTCCGCAATaGTGCTTGAGCCGCCCCACC +
Preference number: 4 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWQLRPQ*CLSRPT
Trigger: GGTGGGGCGGCTCAAGCAGCATTGCGGACGGAGCTG...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR CCA 90 bp CAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTCAGCCACCCCACTTTTaGGAGGGCTGCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: QWEPVRIRRVDSEDPKACQPPHF*EGCSTW
Trigger: CCAGGTGCTGCAGCCCTCCCAAAAGTGGGGTGGCTG...ACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR TCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGGTCCGCAATGCTGCTTaGGCCGCCCCACCCGAGCGC +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRAVRNAA*AAPPER
Trigger: GCGCTCGGGTGGGGCGGCTCAAGCAGCATTGCGGAC...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR TCA 90 bp ACATGTCTGATACAACCACTGCCGGTCACCCACACCAGACAGTTGAGGTTCTGTCCCACACCAGACAGTTaGGGTTCTGTGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: TCLIQPLPVTHTRQLRFCPTPDS*GSVLLS
Trigger: GCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGG...ACAGAACCTCAACTGTCTGGTGTGGGTGACCGGCAGTGGTTGTATCAGACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR TCA 90 bp TGTGCAAGACAATGCAAGGCGGCTGGACAAGAAGCGGAGCTGGGCCATTTCCAGAACTCGGTACATGTCTaGTACAACCACTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: CARQCKAAGQEAELGHFQNSVHV*YNHCRS
Trigger: TGACCGGCAGTGGTTGTATCAGACATGTACCGAGTT...CTGGAAATGGCCCAGCTCCGCTTCTTGTCCAGCCGCCTTGCATTGTCTTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468930.5
CDS-3UTR GCA 90 bp GAAGCCGAACTCGGTACATGTCTGATACAACCACTGCCGGTCACCCACACCAGAACAGTTGAGGTTCTGTaGTCCTCAGCTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: EAELGTCLIQPLPVTHTRTVEVL*SSAVPL
Trigger: CAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGT...TCTGGTGTGGGTGACCGGCAGTGGTTGTATCAGACATGTACCGAGTTCGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR CCA 90 bp CACTTTGTTAGCCCCAGGGGTCTGGCCACCGTAGTAGGAGTTCGTCTGAGCCACACTTCACCCTTAATCTaGCTCTCCTTTGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HFVSPRGLATVVGVRLSHTSPLI*LSFASL
Trigger: CAAGCTGGCAAAGGAGAGCCAGATTAAGGGTGAAGT...GTGGCTCAGACGAACTCCTACTACGGTGGCCAGACCCCTGGGGCTAACAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR GCA 90 bp ACATGTCTGATACAACCACTGCCGGTCACCCACACCAGACAGTTGAGGTTCTGTAAGGGGTCCAGCAGTTaGTCCAGCCACCCCACTTTT +
Preference number: 4 (lower is better)
Translates to: TCLIQPLPVTHTRQLRFCKGSSS*SSHPTF
Trigger: AAAAGTGGGGTGGCTGGAGCAACTGCTGGACCCCTT...ACAGAACCTCAACTGTCTGGTGTGGGTGACCGGCAGTGGTTGTATCAGACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR GCA 90 bp CACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGGAACCTCCCACCAGTGCCTaGAGCGCCCCCAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: HFKLGIRMFADTCQLRAEPPTSA*SAPNSS
Trigger: GGAGCTGTTGGGGGCGCTGCAGGCACTGGTGGGAGG...TTCCGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR GCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGTGGAGTGGCTGCGGTTaGCCCCGCCCCCGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRAWSGCG*PRPRGE
Trigger: TTCTCCTCGGGGGCGGGGGCAACCGCAGCCACTCCA...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR CCA 90 bp GTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCAGAGGGCCCAGCCACTaGGCAAGCCAGACGGCCATG +
Preference number: 4 (lower is better)
Translates to: VRIRRVDSEDPKACVTLSRGPSH*ASQTAM
Trigger: CATGGCCGTCTGGCTTGCCCAGTGGCTGGGCCCTCT...GCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR CCA 90 bp ATGTCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTGGCAGTGCTGGGAGCTaGGAGAAAGGACATCTGGGA +
Preference number: 4 (lower is better)
Translates to: MSKQWEPVRIRRVDSEDPGSAGS*EKGHLG
Trigger: TCCCAGATGTCCTTTCTCCCAGCTCCCAGCACTGCC...AGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR CCA 90 bp GCCATGTCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATGCCATGTCCAAGCAGTaGGAGCCAGTGCGGATAAGA +
Preference number: 4 (lower is better)
Translates to: AMSKQWEPVRIRRVDSEDAMSKQ*EPVRIR
Trigger: TCTTATCCGCACTGGCTCCCACTGCTTGGACATGGC...ATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGACATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR TCA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGCGACCGACGCGAAAATaGGATGGGGGAACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWRPTRK*DGGTSA
Trigger: GGCTGAAGTTCCCCCATCTCATTTTCGCGTCGGTCG...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR TCA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGAACTCGGTACATGTCTaGTACAACCACTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GLALSSQALEEGISTRIMNSVHV*YNHCRS
Trigger: TGACCGGCAGTGGTTGTATCAGACATGTACCGAGTT...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR TCA 90 bp GAACTCGGTACATGTCTGATACAACCACTGCCGGTCACCCACACCAGACAGTTGAACTCGGTACATGTCTaGTACAACCACTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: ELGTCLIQPLPVTHTRQLNSVHV*YNHCRS
Trigger: TGACCGGCAGTGGTTGTATCAGACATGTACCGAGTT...CAACTGTCTGGTGTGGGTGACCGGCAGTGGTTGTATCAGACATGTACCGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR TCA 90 bp ATGTCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTTCTCCTTTGCCAGCTTaGGCCAGGTCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MSKQWEPVRIRRVDSEDPSPLPA*ARSVAA
Trigger: AGCAGCTACAGACCTGGCTCAAGCTGGCAAAGGAGA...AGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR GCA 90 bp GATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCACATGCCAGGGGTCTGTGCCCTCACCCCCTAGATaGAGGAATATGGGTCCATCC +
Preference number: 4 (lower is better)
Translates to: DSEDPKACVTLSTCQGSVPSPPR*RNMGPS
Trigger: GGATGGACCCATATTCCTGCATCTAGGGGGTGAGGG...CACAGACCCCTGGCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR GCA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTAGCCAGGCCCAAGGCTaGCCTCACCCCCTAGATGCA +
Preference number: 4 (lower is better)
Translates to: DQQGEGTSISHICLTFNISQAQG*PHPLDA
Trigger: TGCATCTAGGGGGTGAGGGCAGCCTTGGGCCTGGCT...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000454665.6
CDS-3UTR GCA 90 bp GTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCAGCCAGGCCCAAGGCTaGCCTCACCCCCTAGATGCA +
Preference number: 4 (lower is better)
Translates to: VRIRRVDSEDPKACVTLSSQAQG*PHPLDA
Trigger: TGCATCTAGGGGGTGAGGGCAGCCTTGGGCCTGGCT...GCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR GCA 90 bp TCAGGTGCCATGTCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTACAGTTGAGGTTCTGTaGTCCTCAGCTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SGAMSKQWEPVRIRRVDSTVEVL*SSAVPL
Trigger: CAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGT...AGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGACATGGCACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR GCA 90 bp CAGGAGCTGGAGTGGCAGAATTTGAACCAGAATCTGATCAGCAGGGCGAGGGCACACATGCCAATTACGTaGGGAACAGGTGCTGAATTC +
Preference number: 4 (lower is better)
Translates to: QELEWQNLNQNLISRARAHMPIT*GTGAEF
Trigger: GAATTCAGCACCTGTTCCGCACGTAATTGGCATGTG...TGCCCTCGCCCTGCTGATCAGATTCTGGTTCAAATTCTGCCACTCCAGCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp ATACAACCACTGCCGGTCACCCACACCAGACAGTTGAGGTTCTGTGCTCCTCAGAATATGGGTCCATCCTaGCCAACCCAATGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: IQPLPVTHTRQLRFCAPQNMGPS*PTQCWS
Trigger: TGACCAACATTGGGTTGGCCAGGATGGACCCATATT...CTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGTGACCGGCAGTGGTTGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470870.5
CDS-3UTR CCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGCCAGCGCAAGGCGGCTaGACAAGAAGCGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRAPAQGG*TRSGAG
Trigger: CCCAGCTCCGCTTCTTGTCCAGCCGCCTTGCGCTGG...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR CCA 90 bp CTCGGTACATGTCTGATACAACCACTGCCGGTCACCCACACCAGACAGTTGAGGAAGCTTAAACACTTCTaGCCCAGGCTGTGCAAGACA +
Preference number: 4 (lower is better)
Translates to: LGTCLIQPLPVTHTRQLRKLKHF*PRLCKT
Trigger: TGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTT...CCTCAACTGTCTGGTGTGGGTGACCGGCAGTGGTTGTATCAGACATGTACCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR CCA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGGGCAGTGCTGGGAGCTaGGAGAAAGGACATCTGGGA +
Preference number: 4 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWGSAGS*EKGHLG
Trigger: TCCCAGATGTCCTTTCTCCCAGCTCCCAGCACTGCC...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp ATGTCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTGCCATGTCCAAGCAGTaGGAGCCAGTGCGGATAAGA +
Preference number: 4 (lower is better)
Translates to: MSKQWEPVRIRRVDSEDPAMSKQ*EPVRIR
Trigger: TCTTATCCGCACTGGCTCCCACTGCTTGGACATGGC...AGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR TCA 90 bp GAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCACATGCCAGGCCCACACCAGACAGTTaGGGTTCTGTGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: EELILRILKPVLHLAHARPTPDS*GSVLLS
Trigger: GCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGG...CCTGGCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATCAACTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR TCA 90 bp GGCCCTGGAAGAAGGAATCTCCACCAGAATCATGAATCCCTAGAGTTGGAAGCTTGGGATTCTCACAGGTaGCATAGAAGCCGAACTCGG +
Preference number: 4 (lower is better)
Translates to: GPGRRNLHQNHESLELEAWDSHR*HRSRTR
Trigger: CCGAGTTCGGCTTCTATGTCACCTGTGAGAATCCCA...AGCTTCCAACTCTAGGGATTCATGATTCTGGTGGAGATTCCTTCTTCCAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR TCA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGTCTCCTTTGCCAGCTTaGGCCAGGTCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWSPLPA*ARSVAA
Trigger: AGCAGCTACAGACCTGGCTCAAGCTGGCAAAGGAGA...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR TCA 90 bp GACACATGCCAATTACGTGCGGAACAGGTGCTGAATTCCAATTCCTGGGAGTTTTCTCCTTTGCCAGCTTaGGCCAGGTCTGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DTCQLRAEQVLNSNSWEFSPLPA*ARSVAA
Trigger: AGCAGCTACAGACCTGGCTCAAGCTGGCAAAGGAGA...AAACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR TCA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGTGTCCAGGACTGAGGTaGCCATGCAGGGAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWCPGLR*PCREWK
Trigger: TTTCCACTCCCTGCATGGTCACCTCAGTCCTGGACA...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGAAGGGGTCCAGCAGTTaGTCCAGCCACCCCACTTTT +
Preference number: 4 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWKGSSS*SSHPTF
Trigger: AAAAGTGGGGTGGCTGGAGCAACTGCTGGACCCCTT...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp GACACATGCCAATTACGTGCGGAACAGGTGCTGAATTCCAATTCCTGGGAGTTTAAGGGGTCCAGCAGTTaGTCCAGCCACCCCACTTTT +
Preference number: 4 (lower is better)
Translates to: DTCQLRAEQVLNSNSWEFKGSSS*SSHPTF
Trigger: AAAAGTGGGGTGGCTGGAGCAACTGCTGGACCCCTT...AAACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp TCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAAAGGGGTCCAGCAGTTaGTCCAGCCACCCCACTTTT +
Preference number: 4 (lower is better)
Translates to: SKQWEPVRIRRVDSEDPKKGSSS*SSHPTF
Trigger: AAAAGTGGGGTGGCTGGAGCAACTGCTGGACCCCTT...TTTAGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR GCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGTACACCTCCCACCAGTaGCTGCAGCGCCCCCAACAG +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRAYTSHQ*LQRPQQ
Trigger: CTGTTGGGGGCGCTGCAGGCACTGGTGGGAGGTGTA...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR GCA 90 bp GATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCACATGCCAGGGGTCTGTGGAGAGCCCAAACACCTaGTCACATAGGTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: DSEDPKACVTLSTCQGSVESPNT*SHRSSW
Trigger: CCAGCTAGACCTATGTGAGCAGGTGTTTGGGCTCTC...CACAGACCCCTGGCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR GCA 90 bp GACACATGCCAATTACGTGCGGAACAGGTGCTGAATTCCAATTCCTGGGAGTTTAGCCAGGTCTGTAGCTaGTGGAAGATGTTCTGGCGC +
Preference number: 4 (lower is better)
Translates to: DTCQLRAEQVLNSNSWEFSQVCS*WKMFWR
Trigger: GCGCCAGAACATCTTCCAGCAGCTACAGACCTGGCT...AAACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp GGCCCTGGAAGAAGGAATCTCCACCAGAATCATGAATCCCTAGAGTTGGAAGCTAATCTGGCTCTCCTTTaGCAGCTTGAGCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GPGRRNLHQNHESLELEANLALL*QLEPGL
Trigger: CAGACCTGGCTCAAGCTGGCAAAGGAGAGCCAGATT...AGCTTCCAACTCTAGGGATTCATGATTCTGGTGGAGATTCCTTCTTCCAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR GCA 90 bp CAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTAATCTGGCTCTCCTTTaGCAGCTTGAGCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: QWEPVRIRRVDSEDPKACNLALL*QLEPGL
Trigger: CAGACCTGGCTCAAGCTGGCAAAGGAGAGCCAGATT...ACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR CCA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGCAAGCCAGACGGCCATaGTGTTCGGGACTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWQARRP*CSGLCS
Trigger: AGAACAGAGTCCCGAACACCATGGCCGTCTGGCTTG...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp CACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGGAACAGCCACCCCACTTTTaGGAGGGCTGCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: HFKLGIRMFADTCQLRAEQPPHF*EGCSTW
Trigger: CCAGGTGCTGCAGCCCTCCCAAAAGTGGGGTGGCTG...TTCCGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGAAGCTTAAACACTTCTaGCCCAGGCTGTGCAAGACA +
Preference number: 4 (lower is better)
Translates to: GLALSSQALEEGISTRIMKLKHF*PRLCKT
Trigger: TGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTT...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR CCA 90 bp GACATAGAAGCCGAACTCGGTACATGTCTGATACAACCACTGCCGGTCACCCACAAGCTTAAACACTTCTaGCCCAGGCTGTGCAAGACA +
Preference number: 4 (lower is better)
Translates to: DIEAELGTCLIQPLPVTHKLKHF*PRLCKT
Trigger: TGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTT...GTGGGTGACCGGCAGTGGTTGTATCAGACATGTACCGAGTTCGGCTTCTATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR CCA 90 bp GACACATGCCAATTACGTGCGGAACAGGTGCTGAATTCCAATTCCTGGGAGTTTGCCATGTCCAAGCAGTaGGAGCCAGTGCGGATAAGA +
Preference number: 4 (lower is better)
Translates to: DTCQLRAEQVLNSNSWEFAMSKQ*EPVRIR
Trigger: TCTTATCCGCACTGGCTCCCACTGCTTGGACATGGC...AAACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTTGCTGGAAGATGTTCTaGCGCCCTAGGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DQQGEGTSISHICLTFNICWKMF*RPRRRL
Trigger: CAGCCTCCGCCTAGGGCGCCAGAACATCTTCCAGCA...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp AGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCACATGCCAGTGCTGGAAGATGTTCTaGCGCCCTAGGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RRVDSEDPKACVTLSTCQCWKMF*RPRRRL
Trigger: CAGCCTCCGCCTAGGGCGCCAGAACATCTTCCAGCA...CTGGCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATCAACTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR CCA 90 bp GACACATGCCAATTACGTGCGGAACAGGTGCTGAATTCCAATTCCTGGGAGTTTCAGGTCTGTAGCTGCTaGAAGATGTTCTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: DTCQLRAEQVLNSNSWEFQVCSC*KMFWRP
Trigger: AGGGCGCCAGAACATCTTCCAGCAGCTACAGACCTG...AAACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR TCA 90 bp GTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCGTCTGTCGGACACGTTaGAGGGGTCCAGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: VRIRRVDSEDPKACVTLSVCRTR*RGPAVA
Trigger: AGCAACTGCTGGACCCCTTCAACGTGTCCGACAGAC...GCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR TCA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTCCCACACCAGACAGTTaGGGTTCTGTGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: DQQGEGTSISHICLTFNIPTPDS*GSVLLS
Trigger: GCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGG...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR TCA 90 bp GACACATGCCAATTACGTGCGGAACAGGTGCTGAATTCCAATTCCTGGGAGTTTTGGGATTCTCACAGGTaGCATAGAAGCCGAACTCGG +
Preference number: 4 (lower is better)
Translates to: DTCQLRAEQVLNSNSWEFWDSHR*HRSRTR
Trigger: CCGAGTTCGGCTTCTATGTCACCTGTGAGAATCCCA...AAACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR TCA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGTACAGTGAGAGAAACTaGGAAGCAAGGACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: GLALSSQALEEGISTRIMYSERN*EARTGS
Trigger: TGAACCTGTCCTTGCTTCTCAGTTTCTCTCACTGTA...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR TCA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGCCAGGGAGTGATATTTaGTTGTGGGAAAAGATGGTG +
Preference number: 4 (lower is better)
Translates to: GLALSSQALEEGISTRIMPGSDI*LWEKMV
Trigger: CACCATCTTTTCCCACAATCAAATATCACTCCCTGG...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR GCA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTACCCGCCGATCGCGGTaGTCATTAGGCTTCGGGATA +
Preference number: 4 (lower is better)
Translates to: DQQGEGTSISHICLTFNITRRSR*SLGFGI
Trigger: TATCCCGAAGCCTAATGAGCACCGCGATCGGCGGGT...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR GCA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTTTCTGGCCCAGGCTGTaGAAGACAATCTGCACCGCC +
Preference number: 4 (lower is better)
Translates to: DQQGEGTSISHICLTFNIFWPRL*KTICTA
Trigger: GGCGGTGCAGATTGTCTTGCACAGCCTGGGCCAGAA...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR GCA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGACAGTTGAGGTTCTGTaGTCCTCAGCTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWTVEVL*SSAVPL
Trigger: CAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGT...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp TGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTGAGAGCCCAAACACCTaGTCACATAGGTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: WEPVRIRRVDSEDPKACVESPNT*SHRSSW
Trigger: CCAGCTAGACCTATGTGAGCAGGTGTTTGGGCTCTC...AACACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR GCA 90 bp GACACATGCCAATTACGTGCGGAACAGGTGCTGAATTCCAATTCCTGGGAGTTTGTTACACTTAGCACATaGCAGGGGTCTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: DTCQLRAEQVLNSNSWEFVTLST*QGSVSP
Trigger: TGGGGACACAGACCCCTGGCATGTGCTAAGTGTAAC...AAACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp GACACATGCCAATTACGTGCGGAACAGGTGCTGAATTCCAATTCCTGGGAGTTTAATCTGGCTCTCCTTTaGCAGCTTGAGCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: DTCQLRAEQVLNSNSWEFNLALL*QLEPGL
Trigger: CAGACCTGGCTCAAGCTGGCAAAGGAGAGCCAGATT...AAACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp CCCTTAATCTGGCTCTCCTTTGCCAGCTTGAGCCAGGTCTGTAGCTGCTGGAAGGGGAATAAGGATGTTTaGAGACACATGCCAATTACG +
Preference number: 4 (lower is better)
Translates to: PLIWLSFASLSQVCSCWKGNKDV*RHMPIT
Trigger: CGTAATTGGCATGTGTCTGCAAACATCCTTATTCCC...CTTCCAGCAGCTACAGACCTGGCTCAAGCTGGCAAAGGAGAGCCAGATTAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR CCA 90 bp ATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCACATGCCAGCCACCCCACTTTTaGGAGGGCTGCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: IRRVDSEDPKACVTLSTCQPPHF*EGCSTW
Trigger: CCAGGTGCTGCAGCCCTCCCAAAAGTGGGGTGGCTG...GCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR TCA 90 bp TGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTAACTCGGTACATGTCTaGTACAACCACTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: WEPVRIRRVDSEDPKACVNSVHV*YNHCRS
Trigger: TGACCGGCAGTGGTTGTATCAGACATGTACCGAGTT...AACACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR TCA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGGGAAGTACCAGGGAGTaGTATTTGATTGTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GLALSSQALEEGISTRIMGSTRE*YLIVGK
Trigger: TTTTCCCACAATCAAATATCACTCCCTGGTACTTCC...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR GCA 90 bp GTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCAAGGGGTCCAGCAGTTaGTCCAGCCACCCCACTTTT +
Preference number: 4 (lower is better)
Translates to: VRIRRVDSEDPKACVTLSKGSSS*SSHPTF
Trigger: AAAAGTGGGGTGGCTGGAGCAACTGCTGGACCCCTT...GCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR GCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACTCCGTCCGCAATGCTaGTTGAGCCGCCCCACCCGA +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLLRPQC*LSRPTR
Trigger: TCGGGTGGGGCGGCTCAAGCAGCATTGCGGACGGAG...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR GCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGAGCGGCGCTCCCGTCTaGCCATCATACTGCACTACA +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRASGAPV*PSYCTT
Trigger: TGTAGTGCAGTATGATGGGCAGACGGGAGCGCCGCT...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR GCA 90 bp GAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTACAGTTACACTTAGCACATaGCAGGGGTCTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: EPVRIRRVDSEDPKACVTVTLST*QGSVSP
Trigger: TGGGGACACAGACCCCTGGCATGTGCTAAGTGTAAC...TGTAACACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR GCA 90 bp ATGTCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTCACATGCCAATTACGTaGGGAACAGGTGCTGAATTC +
Preference number: 4 (lower is better)
Translates to: MSKQWEPVRIRRVDSEDPHMPIT*GTGAEF
Trigger: GAATTCAGCACCTGTTCCGCACGTAATTGGCATGTG...AGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR GCA 90 bp TGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTTTCTGGCCCAGGCTGTaGAAGACAATCTCTCATCAC +
Preference number: 4 (lower is better)
Translates to: WEPVRIRRVDSEDPKACVFWPRL*KTISHH
Trigger: GTGATGAGAGATTGTCTTGCACAGCCTGGGCCAGAA...AACACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR CCA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTCAAGCCAGACGGCCATaGTGTTCGGGACTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: DQQGEGTSISHICLTFNIQARRP*CSGLCS
Trigger: AGAACAGAGTCCCGAACACCATGGCCGTCTGGCTTG...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTAAGAGGGCCCAGCCACTaGGCAAGCCAGACGGCCATG +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLRGPSH*ASQTAM
Trigger: CATGGCCGTCTGGCTTGCCCAGTGGCTGGGCCCTCT...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp ATGTCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAATATGGGTCCATCCTaGCCAACCCAATGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: MSKQWEPVRIRRVDSEDPNMGPS*PTQCWS
Trigger: TGACCAACATTGGGTTGGCCAGGATGGACCCATATT...AGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR CCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGGACAAGAAGCGGAGCTaGGCCATTTCCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRADKKRS*AISRPP
Trigger: TGGAGGCCTGGAAATGGCCCAGCTCCGCTTCTTGTC...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR CCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACCCAACAGCTCCGCCTaGTTTTCAGCGCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLPNSSA*FSARPR
Trigger: CCTGGGCCGCGCTGAAAACCAGGCGGAGCTGTTGGG...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR CCA 90 bp CACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGGAAGGCAGTGCTGGGAGCTaGGAGAAAGGACATCTGGGA +
Preference number: 4 (lower is better)
Translates to: HFKLGIRMFADTCQLRAEGSAGS*EKGHLG
Trigger: TCCCAGATGTCCTTTCTCCCAGCTCCCAGCACTGCC...TTCCGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTGCCATGTCCAAGCAGTaGGAGCCAGTGCGGATAAGA +
Preference number: 4 (lower is better)
Translates to: DQQGEGTSISHICLTFNIAMSKQ*EPVRIR
Trigger: TCTTATCCGCACTGGCTCCCACTGCTTGGACATGGC...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR TCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTAATGGCCTCTCATCACTaGGCCAGGCCCAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLMASHH*ARPKAA
Trigger: GGCAGCCTTGGGCCTGGCTCAGTGATGAGAGGCCAT...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR TCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGTGTCCAGGACTGAGGTaGCCATGCAGGGAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRACPGLR*PCREWK
Trigger: TTTCCACTCCCTGCATGGTCACCTCAGTCCTGGACA...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTGTCTGCCCATCATACTaGACTACACCTCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: DQQGEGTSISHICLTFNIVCPSY*TTPPTS
Trigger: ACTGGTGGGAGGTGTAGTGCAGTATGATGGGCAGAC...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR GCA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTACAGTTGAGGTTCTGTaGTCCTCAGCTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: DQQGEGTSISHICLTFNITVEVL*SSAVPL
Trigger: CAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGT...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp CACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGGAAAGCCAGGTCTGTAGCTaGTGGAAGATGTTCTGGCGC +
Preference number: 4 (lower is better)
Translates to: HFKLGIRMFADTCQLRAESQVCS*WKMFWR
Trigger: GCGCCAGAACATCTTCCAGCAGCTACAGACCTGGCT...TTCCGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGAATATGGGTCCATCCTaGCCAACCCAATGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWNMGPS*PTQCWS
Trigger: TGACCAACATTGGGTTGGCCAGGATGGACCCATATT...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000454665.6
CDS-3UTR CCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGCAGGTCTGTAGCTGCTaGAAGATGTTCTGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRAQVCSC*KMFWRP
Trigger: AGGGCGCCAGAACATCTTCCAGCAGCTACAGACCTG...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGGAGAGCCCAAACACCTaGTCACATAGGTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRAESPNT*SHRSSW
Trigger: CCAGCTAGACCTATGTGAGCAGGTGTTTGGGCTCTC...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGGTTACACTTAGCACATaGCAGGGGTCTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRAVTLST*QGSVSP
Trigger: TGGGGACACAGACCCCTGGCATGTGCTAAGTGTAAC...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGATGTTTGCAGACACATaGCAATTACGTGCGGAACAG +
Preference number: 4 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWMFADT*QLRAEQ
Trigger: CTGTTCCGCACGTAATTGGCATGTGTCTGCAAACAT...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp TCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAATGTTTGCAGACACATaGCAATTACGTGCGGAACAG +
Preference number: 4 (lower is better)
Translates to: SKQWEPVRIRRVDSEDPKMFADT*QLRAEQ
Trigger: CTGTTCCGCACGTAATTGGCATGTGTCTGCAAACAT...TTTAGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR CCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTATGCTGGAAGATGTTCTaGCGCCCTAGGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLCWKMF*RPRRRL
Trigger: CAGCCTCCGCCTAGGGCGCCAGAACATCTTCCAGCA...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp CACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGGAATATCCTCCCAGGCCCTaGAAGAAGGAATCTCCACCA +
Preference number: 4 (lower is better)
Translates to: HFKLGIRMFADTCQLRAEYPPRP*KKESPP
Trigger: TGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATA...TTCCGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR CCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGTATCCTCCCAGGCCCTaGAAGAAGGAATCTCCACCA +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRAYPPRP*KKESPP
Trigger: TGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATA...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR TCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTAGTCTGTCGGACACGTTaGAGGGGTCCAGCAGTTGCT +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLVCRTR*RGPAVA
Trigger: AGCAACTGCTGGACCCCTTCAACGTGTCCGACAGAC...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR TCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACCCACACCAGACAGTTaGGGTTCTGTGCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLPTPDS*GSVLLS
Trigger: GCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGG...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR TCA 90 bp CACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGGAAAACTCGGTACATGTCTaGTACAACCACTGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: HFKLGIRMFADTCQLRAENSVHV*YNHCRS
Trigger: TGACCGGCAGTGGTTGTATCAGACATGTACCGAGTT...TTCCGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGTTCTGGCCCAGGCTGTaGAAGACAATCTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRAFWPRL*KTICRK
Trigger: CTTCCTACAGATTGTCTTGCACAGCCTGGGCCAGAA...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421826.6
CDS-3UTR CCA 90 bp GTTGCCTCTTACCCACAAGGAAATATGAAACTGGATAAAACTCTAAAACTACCAGACGCGAAAATGAGATaGGGGAACTTCAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: VASYPQGNMKLDKTLKLPDAKMR*GNFSRA
Trigger: GGCCCGGCTGAAGTTCCCCCATCTCATTTTCGCGTC...TGGTAGTTTTAGAGTTTTATCCAGTTTCATATTTCCTTGTGGGTAAGAGGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR CCA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTACTTCACCCTTAATCTaGCTCTCCTTTGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: DQQGEGTSISHICLTFNITSPLI*LSFASL
Trigger: CAAGCTGGCAAAGGAGAGCCAGATTAAGGGTGAAGT...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR TCA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGCTTTCTTTTGTTCAGTaGACAAGTATGTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWLSFVQ*TSMSRT
Trigger: AGTCCTGGACATACTTGTTCACTGAACAAAAGAAAG...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR TCA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTTACAGTGAGAGAAACTaGGAAGCAAGGACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: DQQGEGTSISHICLTFNIYSERN*EARTGS
Trigger: TGAACCTGTCCTTGCTTCTCAGTTTCTCTCACTGTA...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp GTTGCCTCTTACCCACAAGGAAATATGAAACTGGATAAAACTCTAAAACTACCACCCTCACCCCCTAGATaGAGGAATATGGGTCCATCC +
Preference number: 4 (lower is better)
Translates to: VASYPQGNMKLDKTLKLPPSPPR*RNMGPS
Trigger: GGATGGACCCATATTCCTGCATCTAGGGGGTGAGGG...TGGTAGTTTTAGAGTTTTATCCAGTTTCATATTTCCTTGTGGGTAAGAGGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR GCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTAAGCCAGGTCTGTAGCTaGTGGAAGATGTTCTGGCGC +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLSQVCS*WKMFWR
Trigger: GCGCCAGAACATCTTCCAGCAGCTACAGACCTGGCT...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGCACATGCCAATTACGTaGGGAACAGGTGCTGAATTC +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRAHMPIT*GTGAEF
Trigger: GAATTCAGCACCTGTTCCGCACGTAATTGGCATGTG...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGACTTCACCCTTAATCTaGCTCTCCTTTGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRATSPLI*LSFASL
Trigger: CAAGCTGGCAAAGGAGAGCCAGATTAAGGGTGAAGT...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR TCA 90 bp GAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCACATGCCAGGCTTTCTTTTGTTCAGTaGACAAGTATGTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: EELILRILKPVLHLAHARLSFVQ*TSMSRT
Trigger: AGTCCTGGACATACTTGTTCACTGAACAAAAGAAAG...CCTGGCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATCAACTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR TCA 90 bp GTTGCCTCTTACCCACAAGGAAATATGAAACTGGATAAAACTCTAAAACTACCAGTGCGGAACAGGTGCTaGATTCCAATTCCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: VASYPQGNMKLDKTLKLPVRNRC*IPIPGS
Trigger: ACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCAC...TGGTAGTTTTAGAGTTTTATCCAGTTTCATATTTCCTTGTGGGTAAGAGGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR TCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGTACAGTGAGAGAAACTaGGAAGCAAGGACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRAYSERN*EARTGS
Trigger: TGAACCTGTCCTTGCTTCTCAGTTTCTCTCACTGTA...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR TCA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGCCAGGGAGTGATATTTaGTTGTGGGAAAAGATGGTG +
Preference number: 4 (lower is better)
Translates to: KHFKLGIRMFADTCQLRAPGSDI*LWEKMV
Trigger: CACCATCTTTTCCCACAATCAAATATCACTCCCTGG...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR GCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTAGAGAGCCCAAACACCTaGTCACATAGGTCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLESPNT*SHRSSW
Trigger: CCAGCTAGACCTATGTGAGCAGGTGTTTGGGCTCTC...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR GCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTAGTTACACTTAGCACATaGCAGGGGTCTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLVTLST*QGSVSP
Trigger: TGGGGACACAGACCCCTGGCATGTGCTAAGTGTAAC...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp TGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTCTGAATTCCAATTCCTaGGAGTTTCTTCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: WEPVRIRRVDSEDPKACVLNSNS*EFLLSK
Trigger: TTTTGAAAGAAGAAACTCCCAGGAATTGGAATTCAG...AACACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR CCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTAAAGCTTAAACACTTCTaGCCCAGGCTGTGCAAGACA +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLKLKHF*PRLCKT
Trigger: TGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTT...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp GTTGCCTCTTACCCACAAGGAAATATGAAACTGGATAAAACTCTAAAACTACCACCTAGAGTTGGAAGCTaGAAGTACCAGGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: VASYPQGNMKLDKTLKLPPRVGS*KYQGVI
Trigger: TATCACTCCCTGGTACTTCCAGCTTCCAACTCTAGG...TGGTAGTTTTAGAGTTTTATCCAGTTTCATATTTCCTTGTGGGTAAGAGGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR CCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACCTAGAGTTGGAAGCTaGAAGTACCAGGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLPRVGS*KYQGVI
Trigger: TATCACTCCCTGGTACTTCCAGCTTCCAACTCTAGG...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR GCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTAATGTTTGCAGACACATaGCAATTACGTGCGGAACAG +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLMFADT*QLRAEQ
Trigger: CTGTTCCGCACGTAATTGGCATGTGTCTGCAAACAT...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTCTGAATTCCAATTCCTaGGAGTTTCTTCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: DQQGEGTSISHICLTFNILNSNS*EFLLSK
Trigger: TTTTGAAAGAAGAAACTCCCAGGAATTGGAATTCAG...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR TCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTAGGAAGTACCAGGGAGTaGTATTTGATTGTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLGSTRE*YLIVGK
Trigger: TTTTCCCACAATCAAATATCACTCCCTGGTACTTCC...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR GCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTAGGGAATAAGGATGTTTaGAGACACATGCCAATTACG +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLGNKDV*RHMPIT
Trigger: CGTAATTGGCATGTGTCTGCAAACATCCTTATTCCC...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CCA 90 bp CACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGGAACTGAATTCCAATTCCTaGGAGTTTCTTCTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: HFKLGIRMFADTCQLRAELNSNS*EFLLSK
Trigger: TTTTGAAAGAAGAAACTCCCAGGAATTGGAATTCAG...TTCCGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR TCA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACTTTCTTTTGTTCAGTaGACAAGTATGTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLLSFVQ*TSMSRT
Trigger: AGTCCTGGACATACTTGTTCACTGAACAAAAGAAAG...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS GCA 90 bp AGCGCGGCCCAGGGGCCCGCAAGCGCTCAGCTCCGTCCGCAATGCTaGTTGAGCCGCCCCACCCGAGCGCAGCCGCCGCTCCACTTCAGC +
Preference number: 5 (lower is better)
Translates to: SAAQGPASAQLRPQC*LSRPTRAQPPLHFS
Trigger: GCTGAAGTGGAGCGGCGGCTGCGCTCGGGTGGGGCGGCTCAAGCAGCATTGCGGACGGAGCTGAGCGCTTGCGGGCCCCTGGGCCGCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230582.8
ENST00000377456.6
ENST00000462664.4
ENST00000468138.5
ENST00000471463.5
ENST00000481125.5
CDS TCA 90 bp CGGCCCAGGGGCCCGCAAGCGCTCAGCTCCGTCCGCAATGCTGCTTaGGCCGCCCCACCCGAGCGCAGCCGCCGCTCCACTTCAGCGAAG +
Preference number: 5 (lower is better)
Translates to: RPRGPQALSSVRNAA*AAPPERSRRSTSAK
Trigger: CTTCGCTGAAGTGGAGCGGCGGCTGCGCTCGGGTGGGGCGGCTCAAGCAGCATTGCGGACGGAGCTGAGCGCTTGCGGGCCCCTGGGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230582.8
ENST00000377456.6
ENST00000462664.4
ENST00000468138.5
ENST00000471463.5
ENST00000481125.5
CDS GCA 90 bp TTCAGCGCGGCCCAGGGGCCCGCAAGCGCTCAGCTCCGTCCGCAATaGTGCTTGAGCCGCCCCACCCGAGCGCAGCCGCCGCTCCACTTC +
Preference number: 5 (lower is better)
Translates to: FSAAQGPASAQLRPQ*CLSRPTRAQPPLHF
Trigger: GAAGTGGAGCGGCGGCTGCGCTCGGGTGGGGCGGCTCAAGCAGCATTGCGGACGGAGCTGAGCGCTTGCGGGCCCCTGGGCCGCGCTGAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230582.8
ENST00000377456.6
ENST00000462664.4
ENST00000468138.5
ENST00000471463.5
ENST00000481125.5
CDS GCA 90 bp GCACCGCCCGACGAAGCCCGCAGTAGGGCGTGGAGTGGCTGCGGTTaGCCCCGCCCCCGAGGAGAAGTCCGCAGAGCTGTCGCACGCTTA +
Preference number: 5 (lower is better)
Translates to: APPDEARSRAWSGCG*PRPRGEVRRAVARL
Trigger: TAAGCGTGCGACAGCTCTGCGGACTTCTCCTCGGGGGCGGGGGCAACCGCAGCCACTCCACGCCCTACTGCGGGCTTCGTCGGGCGGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230582.8
ENST00000377456.6
ENST00000462664.4
ENST00000468138.5
ENST00000471463.5
ENST00000481125.5
CDS GCA 90 bp TCACCTGCACCGCCCGACGAAGCCCGCAGTAGGGCGTGGAGTGGCTaGGGTTGCCCCCGCCCCCGAGGAGAAGTCCGCAGAGCTGTCGCA +
Preference number: 5 (lower is better)
Translates to: SPAPPDEARSRAWSG*GCPRPRGEVRRAVA
Trigger: TGCGACAGCTCTGCGGACTTCTCCTCGGGGGCGGGGGCAACCGCAGCCACTCCACGCCCTACTGCGGGCTTCGTCGGGCGGTGCAGGTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462664.4
CDS CCA 90 bp AGGGAGTGCTCACCTGCACCGCCCGACGAAGCCCGCAGTAGGGCGTaGAGTGGCTGCGGTTGCCCCCGCCCCCGAGGAGAAGTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: RECSPAPPDEARSRA*SGCGCPRPRGEVRR
Trigger: TCTGCGGACTTCTCCTCGGGGGCGGGGGCAACCGCAGCCACTCCACGCCCTACTGCGGGCTTCGTCGGGCGGTGCAGGTGAGCACTCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462664.4
CDS GCA 90 bp CAATCTGCACCGCCCGACGAAGCCCGCAGTAGGGCGTGGAGTGGCTaGGGTTGCCCCCGCCCCCGAGGAGAAGTCCGCAGAGCTGTCGCA +
Preference number: 5 (lower is better)
Translates to: QSAPPDEARSRAWSG*GCPRPRGEVRRAVA
Trigger: TGCGACAGCTCTGCGGACTTCTCCTCGGGGGCGGGGGCAACCGCAGCCACTCCACGCCCTACTGCGGGCTTCGTCGGGCGGTGCAGATTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000468138.5
ENST00000481125.5
CDS GCA 90 bp ACATCTGCACCGCCCGACGAAGCCCGCAGTAGGGCGTGGAGTGGCTaGGGTTGCCCCCGCCCCCGAGGAGAAGTCCGCAGAGCTGTCGCA +
Preference number: 5 (lower is better)
Translates to: TSAPPDEARSRAWSG*GCPRPRGEVRRAVA
Trigger: TGCGACAGCTCTGCGGACTTCTCCTCGGGGGCGGGGGCAACCGCAGCCACTCCACGCCCTACTGCGGGCTTCGTCGGGCGGTGCAGATGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471463.5
CDS CCA 90 bp TCACAGGTGACATCTGCACCGCCCGACGAAGCCCGCAGTAGGGCGTaGAGTGGCTGCGGTTGCCCCCGCCCCCGAGGAGAAGTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: SQVTSAPPDEARSRA*SGCGCPRPRGEVRR
Trigger: TCTGCGGACTTCTCCTCGGGGGCGGGGGCAACCGCAGCCACTCCACGCCCTACTGCGGGCTTCGTCGGGCGGTGCAGATGTCACCTGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471463.5
CDS CCA 90 bp TGTGCAAGACAATCTGCACCGCCCGACGAAGCCCGCAGTAGGGCGTaGAGTGGCTGCGGTTGCCCCCGCCCCCGAGGAGAAGTCCGCAGA +
Preference number: 5 (lower is better)
Translates to: CARQSAPPDEARSRA*SGCGCPRPRGEVRR
Trigger: TCTGCGGACTTCTCCTCGGGGGCGGGGGCAACCGCAGCCACTCCACGCCCTACTGCGGGCTTCGTCGGGCGGTGCAGATTGTCTTGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000468138.5
ENST00000481125.5
CDS CCA 90 bp CCGCTCCACTTCAGCGAAGGCGACGGACACCGCCGCCCGGCACTGTaGGAAGCAAGAGGCGATGTCCGCCAAGACTTAGGCTGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: PLHFSEGDGHRRPAL*EARGDVRQDLGWAS
Trigger: CGAGGCCCAGCCTAAGTCTTGGCGGACATCGCCTCTTGCTTCCCACAGTGCCGGGCGGCGGTGTCCGTCGCCTTCGCTGAAGTGGAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377456.6
ENST00000468138.5
ENST00000471463.5
CDS GCA 90 bp GCTCCCGTCTGCCCATCATACTGCACTACACCTCCCACCAGTGCCTaGAGCGCCCCCAACAGCTCCGCCTGGTTTTCAGCGCGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: APVCPSYCTTPPTSA*SAPNSSAWFSARPR
Trigger: CCTGGGCCGCGCTGAAAACCAGGCGGAGCTGTTGGGGGCGCTGCAGGCACTGGTGGGAGGTGTAGTGCAGTATGATGGGCAGACGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230582.8
ENST00000377456.6
ENST00000462664.4
ENST00000468138.5
ENST00000471463.5
ENST00000481125.5
CDS GCA 90 bp TCAAGGGACTCCGCCCGCTGGGACCCCTCCCCGTCCCGCACCTGCTaGCCGCCATCCTTACGTCATTATACTCGGAGAAATCCAGCACGG +
Preference number: 5 (lower is better)
Translates to: SRDSARWDPSPSRTC*PPSLRHYTRRNPAR
Trigger: CCGTGCTGGATTTCTCCGAGTATAATGACGTAAGGATGGCGGGCAGCAGGTGCGGGACGGGGAGGGGTCCCAGCGGGCGGAGTCCCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495683.5
CDS CCA 90 bp GCCAAGAGTCCCCAGAGGGAAACCAAGAGCAGAGGGCCCAGCCACTaGGCAAGCCAGACGGCCATGGTGTTCGGGACTCTGTTCTCCCCC +
Preference number: 5 (lower is better)
Translates to: AKSPQRETKSRGPSH*ASQTAMVFGTLFSP
Trigger: GGGGGAGAACAGAGTCCCGAACACCATGGCCGTCTGGCTTGCCCAGTGGCTGGGCCCTCTGCTCTTGGTTTCCCTCTGGGGACTCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS GCA 90 bp GTGTCAAGGGACTCCGCCCGCTGGGACCCCTCCCCGTCCCGCACCTaGTGCCCGCCATCCTTACGTCATTATACTCGGAGAAATCCAGCA +
Preference number: 5 (lower is better)
Translates to: VSRDSARWDPSPSRT*CPPSLRHYTRRNPA
Trigger: TGCTGGATTTCTCCGAGTATAATGACGTAAGGATGGCGGGCAGCAGGTGCGGGACGGGGAGGGGTCCCAGCGGGCGGAGTCCCTTGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495683.5
CDS CCA 90 bp TTAGGCTGGGCCTCGGCTTTCCCTACCCAGGACCTGCGTCCTCCTTaGGTTCCCCACTTTCCCCTAGCGGGACTCAGAGGGTGCAGACCT +
Preference number: 5 (lower is better)
Translates to: LGWASAFPTQDLRPP*VPHFPLAGLRGCRP
Trigger: AGGTCTGCACCCTCTGAGTCCCGCTAGGGGAAAGTGGGGAACCCAAGGAGGACGCAGGTCCTGGGTAGGGAAAGCCGAGGCCCAGCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377456.6
ENST00000468138.5
CDS CCA 90 bp CCGGCACTGTGGGAAGCAAGAGGCGATGTCCGCCAAGACTTAGGCTaGGCCTCGGCTTTCCCTACCCAGGACCTGCGTCCTCCTTGGGTT +
Preference number: 5 (lower is better)
Translates to: PALWEARGDVRQDLG*ASAFPTQDLRPPWV
Trigger: AACCCAAGGAGGACGCAGGTCCTGGGTAGGGAAAGCCGAGGCCCAGCCTAAGTCTTGGCGGACATCGCCTCTTGCTTCCCACAGTGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377456.6
ENST00000468138.5
ENST00000471463.5
CDS GCA 90 bp CGACGGACACCGCCGCCCGGCACTCCAGGGACCCGCCGATCGCGGTaGTCATTAGGCTTCGGGATACCACGTCATTATACTCGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: RRTPPPGTPGTRRSR*SLGFGIPRHYTRRN
Trigger: ATTTCTCCGAGTATAATGACGTGGTATCCCGAAGCCTAATGAGCACCGCGATCGGCGGGTCCCTGGAGTGCCGGGCGGCGGTGTCCGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS-3UTR CAA 90 bp CCACTGCCGGTCACCCACACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCCGTCTGTCGGACACGTaGAAGGGGTCCAGCAGTTGC +
Preference number: 5 (lower is better)
Translates to: PLPVTHTRQLRFCAPQLCRLSDT*KGSSSC
Trigger: GCAACTGCTGGACCCCTTCAACGTGTCCGACAGACG...GCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGTGACCGGCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR CAA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGCGTCCGCAATGCTGCTaGAGCCGCCCCACCCGAGCG +
Preference number: 5 (lower is better)
Translates to: GLALSSQALEEGISTRIMRPQCC*SRPTRA
Trigger: CGCTCGGGTGGGGCGGCTCAAGCAGCATTGCGGACG...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS CCA 90 bp CTCAGCTGTGCCACTGTCTCTGCTCGGGAAAAGCTTAAACACTTCTaGCCCAGGCTGTGCAAGACAATCTTCAGCCGGGCCCAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: LSCATVSAREKLKHF*PRLCKTIFSRAQAA
Trigger: GGCCGCCTGGGCCCGGCTGAAGATTGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTTTTCCCGAGCAGAGACAGTGGCACAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485993.4
CDS CCA 90 bp CTCAGCTGTGCCACTGTCTCTGCTCGGGAAAAGCTTAAACACTTCTaGCCCAGGCTGTGCAAGACAATCTGCACCGCCCGACGAAGCCCG +
Preference number: 5 (lower is better)
Translates to: LSCATVSAREKLKHF*PRLCKTICTARRSP
Trigger: CGGGCTTCGTCGGGCGGTGCAGATTGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTTTTCCCGAGCAGAGACAGTGGCACAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000468138.5
ENST00000481125.5
CDS CCA 90 bp CTCAGCTGTGCCACTGTCTCTGCTCGGGAAAAGCTTAAACACTTCTaGCCCAGGCTGTGCAAGACAATCTCCAGGGACCCGCCGATCGCG +
Preference number: 5 (lower is better)
Translates to: LSCATVSAREKLKHF*PRLCKTISRDPPIA
Trigger: CGCGATCGGCGGGTCCCTGGAGATTGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTTTTCCCGAGCAGAGACAGTGGCACAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488649.5
ENST00000492575.5
CDS-3UTR CAA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGCCAGCCACCCCACTTTaGGGAGGGCTGCAGCACCTG +
Preference number: 5 (lower is better)
Translates to: GLALSSQALEEGISTRIMPATPL*GGLQHL
Trigger: CAGGTGCTGCAGCCCTCCCAAAAGTGGGGTGGCTGG...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR CAA 90 bp GCCGAACTCGGTACATGTCTGATACAACCACTGCCGGTCACCCACACCAGACAGGAAGGGGTCCAGCAGTaGCTCCAGCCACCCCACTTT +
Preference number: 5 (lower is better)
Translates to: AELGTCLIQPLPVTHTRQEGVQQ*LQPPHF
Trigger: AAAGTGGGGTGGCTGGAGCAACTGCTGGACCCCTTC...CTGTCTGGTGTGGGTGACCGGCAGTGGTTGTATCAGACATGTACCGAGTTCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR CAA 90 bp ACAACCACTGCCGGTCACCCACACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTCGTCTGTCGGACACGTaGAAGGGGTCCAGCAGTTGC +
Preference number: 5 (lower is better)
Translates to: TTTAGHPHQTVEVLCSSARLSDT*KGSSSC
Trigger: GCAACTGCTGGACCCCTTCAACGTGTCCGACAGACG...AGCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGTGACCGGCAGTGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS GCA 90 bp CCTCTCATCACTGAGCCAGGCCCAAGGCTGCCCTCACCCCCTAGATaGAGGAATATGGGTCCATCCTGGCCAACCCAATGTTGGTCATTC +
Preference number: 5 (lower is better)
Translates to: PLITEPGPRLPSPPR*RNMGPSWPTQCWSF
Trigger: GAATGACCAACATTGGGTTGGCCAGGATGGACCCATATTCCTGCATCTAGGGGGTGAGGGCAGCCTTGGGCCTGGCTCAGTGATGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000470870.5
CDS CCA 90 bp CTGAGCCAGGCCCAAGGCTGCCCTCACCCCCTAGATGCAGGAATATaGGTCCATCCTGGCCAACCCAATGTTGGTCATTCACCCAGTAAC +
Preference number: 5 (lower is better)
Translates to: LSQAQGCPHPLDAGI*VHPGQPNVGHSPSN
Trigger: GTTACTGGGTGAATGACCAACATTGGGTTGGCCAGGATGGACCCATATTCCTGCATCTAGGGGGTGAGGGCAGCCTTGGGCCTGGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000454665.6
ENST00000470870.5
CDS-3UTR CAA 90 bp CTGGGCCATTTCCAGGCCTCCAGCAGGTATACTCAGGCCATAAAATCTGTGTTCCCAGCCACCCCACTTTaGGGAGGGCTGCAGCACCTG +
Preference number: 5 (lower is better)
Translates to: LGHFQASSRYTQAIKSVFPATPL*GGLQHL
Trigger: CAGGTGCTGCAGCCCTCCCAAAAGTGGGGTGGCTGG...GAACACAGATTTTATGGCCTGAGTATACCTGCTGGAGGCCTGGAAATGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468930.5
CDS-3UTR CAA 90 bp AGCCGAACTCGGTACATGTCTGATACAACCACTGCCGGTCACCCACACCAGACAGAAGGGGTCCAGCAGTaGCTCCAGCCACCCCACTTT +
Preference number: 5 (lower is better)
Translates to: SRTRYMSDTTTAGHPHQTEGVQQ*LQPPHF
Trigger: AAAGTGGGGTGGCTGGAGCAACTGCTGGACCCCTTC...TGTCTGGTGTGGGTGACCGGCAGTGGTTGTATCAGACATGTACCGAGTTCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS GCA 90 bp TCTCTCATCACTGAGCCAGGCCCAAGGCTGCCCTCACCCCCTAGATaGAGGAATATGGGTCCATCCTGGCCAACCCAATGTTGGTCATTC +
Preference number: 5 (lower is better)
Translates to: SLITEPGPRLPSPPR*RNMGPSWPTQCWSF
Trigger: GAATGACCAACATTGGGTTGGCCAGGATGGACCCATATTCCTGCATCTAGGGGGTGAGGGCAGCCTTGGGCCTGGCTCAGTGATGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR CAA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGGAAGGGGTCCAGCAGTaGCTCCAGCCACCCCACTTT +
Preference number: 5 (lower is better)
Translates to: GLALSSQALEEGISTRIMEGVQQ*LQPPHF
Trigger: AAAGTGGGGTGGCTGGAGCAACTGCTGGACCCCTTC...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR CAA 90 bp CACCCACACCAGACAGTTGAGGTTCTGTGCTCCTCAGCTGTGCCACTGTCTCTGACCCACACCAGACAGTaGAGGTTCTGTGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: HPHQTVEVLCSSAVPLSLTHTRQ*RFCAPQ
Trigger: CTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGT...CAGAGACAGTGGCACAGCTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468930.5
ENST00000470870.5
CDS-3UTR CAA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGCCAGCCACCCCACTTTaGGGAGGGCTGCAGCACCTG +
Preference number: 5 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWPATPL*GGLQHL
Trigger: CAGGTGCTGCAGCCCTCCCAAAAGTGGGGTGGCTGG...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CAA 90 bp GCTGTGCCACTGTCTCTGCTCGGGAAAAGCTTAAACACTTCTGGCCCAGGCTGTACCCACACCAGACAGTaGAGGTTCTGTGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: AVPLSLLGKSLNTSGPGCTHTRQ*RFCAPQ
Trigger: CTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGT...ACAGCCTGGGCCAGAAGTGTTTAAGCTTTTCCCGAGCAGAGACAGTGGCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468930.5
CDS-3UTR CAA 90 bp ATCTGGCTCTCCTTTGCCAGCTTGAGCCAGGTCTGTAGCTGCTGGAAGATGTTCCTCTCCTTTGCCAGCTaGAGCCAGGTCTGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: IWLSFASLSQVCSCWKMFLSFAS*SQVCSC
Trigger: GCAGCTACAGACCTGGCTCAAGCTGGCAAAGGAGAG...GAACATCTTCCAGCAGCTACAGACCTGGCTCAAGCTGGCAAAGGAGAGCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS-3UTR CAA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGCCTAAGCAGGCACCCTaGGGATTAGCCCTATCCTCC +
Preference number: 5 (lower is better)
Translates to: GLALSSQALEEGISTRIMPKQAP*GLALSS
Trigger: GGAGGATAGGGCTAATCCCAAGGGTGCCTGCTTAGG...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS CCA 90 bp TGCGTGAGGAGGCATGTGAGGGCCAAGCACATGCATACACTAGTATaGCTTCCACCTTCTCCAGCCCAACATCTGCAGGTTACACAGTGC +
Preference number: 5 (lower is better)
Translates to: CVRRHVRAKHMHTLV*LPPSPAQHLQVTQC
Trigger: GCACTGTGTAACCTGCAGATGTTGGGCTGGAGAAGGTGGAAGCCATACTAGTGTATGCATGTGCTTGGCCCTCACATGCCTCCTCACGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS-3UTR CAA 90 bp GATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCACATGCCAGGGGTCTGTGGAAGGGGTCCAGCAGTaGCTCCAGCCACCCCACTTT +
Preference number: 5 (lower is better)
Translates to: DSEDPKACVTLSTCQGSVEGVQQ*LQPPHF
Trigger: AAAGTGGGGTGGCTGGAGCAACTGCTGGACCCCTTC...CACAGACCCCTGGCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR CAA 90 bp GGCCCTGGAAGAAGGAATCTCCACCAGAATCATGAATCCCTAGAGTTGGAAGCTCGTCTGTCGGACACGTaGAAGGGGTCCAGCAGTTGC +
Preference number: 5 (lower is better)
Translates to: GPGRRNLHQNHESLELEARLSDT*KGSSSC
Trigger: GCAACTGCTGGACCCCTTCAACGTGTCCGACAGACG...AGCTTCCAACTCTAGGGATTCATGATTCTGGTGGAGATTCCTTCTTCCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR CAA 90 bp GATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCACATGCCAGGGGTCTGTGCGTCTGTCGGACACGTaGAAGGGGTCCAGCAGTTGC +
Preference number: 5 (lower is better)
Translates to: DSEDPKACVTLSTCQGSVRLSDT*KGSSSC
Trigger: GCAACTGCTGGACCCCTTCAACGTGTCCGACAGACG...CACAGACCCCTGGCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR CAA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTCCAGCCACCCCACTTTaGGGAGGGCTGCAGCACCTG +
Preference number: 5 (lower is better)
Translates to: DQQGEGTSISHICLTFNIPATPL*GGLQHL
Trigger: CAGGTGCTGCAGCCCTCCCAAAAGTGGGGTGGCTGG...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CAA 90 bp GTGCGGATAAGAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCCCAGCCACCCCACTTTaGGGAGGGCTGCAGCACCTG +
Preference number: 5 (lower is better)
Translates to: VRIRRVDSEDPKACVTLSPATPL*GGLQHL
Trigger: CAGGTGCTGCAGCCCTCCCAAAAGTGGGGTGGCTGG...GCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATCAACTCTTCTTATCCGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR CAA 90 bp GACACATGCCAATTACGTGCGGAACAGGTGCTGAATTCCAATTCCTGGGAGTTTGAAGGGGTCCAGCAGTaGCTCCAGCCACCCCACTTT +
Preference number: 5 (lower is better)
Translates to: DTCQLRAEQVLNSNSWEFEGVQQ*LQPPHF
Trigger: AAAGTGGGGTGGCTGGAGCAACTGCTGGACCCCTTC...AAACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CAA 90 bp CAGGAGCTGGAGTGGCAGAATTTGAACCAGAATCTGATCAGCAGGGCGAGGGCATTAACAAACAGCACTTaGTTAGCCCCAGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: QELEWQNLNQNLISRARALTNST*LAPGVW
Trigger: CCAGACCCCTGGGGCTAACAAAGTGCTGTTTGTTAA...TGCCCTCGCCCTGCTGATCAGATTCTGGTTCAAATTCTGCCACTCCAGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS TCA 90 bp GCAGTGCTGGGAGCTGGGAGAAAGGACATCTGGGATTCTCACAGGTaGCATCTGTGTAGGGAGATACCTGTAAGTGTGGGTATACAGGCA +
Preference number: 5 (lower is better)
Translates to: AVLGAGRKDIWDSHR*HLCREIPVSVGIQA
Trigger: TGCCTGTATACCCACACTTACAGGTATCTCCCTACACAGATGTCACCTGTGAGAATCCCAGATGTCCTTTCTCCCAGCTCCCAGCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS-3UTR CAA 90 bp GAAGAGTTGATTCTGAGGATCCTAAAGCCTGTGTTACACTTAGCACATGCCAGGCGTCTGTCGGACACGTaGAAGGGGTCCAGCAGTTGC +
Preference number: 5 (lower is better)
Translates to: EELILRILKPVLHLAHARRLSDT*KGSSSC
Trigger: GCAACTGCTGGACCCCTTCAACGTGTCCGACAGACG...CCTGGCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGAATCAACTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR CAA 90 bp GGCCCTGGAAGAAGGAATCTCCACCAGAATCATGAATCCCTAGAGTTGGAAGCTACCCACACCAGACAGTaGAGGTTCTGTGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: GPGRRNLHQNHESLELEATHTRQ*RFCAPQ
Trigger: CTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGT...AGCTTCCAACTCTAGGGATTCATGATTCTGGTGGAGATTCCTTCTTCCAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR CAA 90 bp GGATTAGCCCTATCCTCCCAGGCCCTGGAAGAAGGAATCTCCACCAGAATCATGTTAACAAACAGCACTTaGTTAGCCCCAGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: GLALSSQALEEGISTRIMLTNST*LAPGVW
Trigger: CCAGACCCCTGGGGCTAACAAAGTGCTGTTTGTTAA...CATGATTCTGGTGGAGATTCCTTCTTCCAGGGCCTGGGAGGATAGGGCTAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR CAA 90 bp GACACATGCCAATTACGTGCGGAACAGGTGCTGAATTCCAATTCCTGGGAGTTTCCTAAGCAGGCACCCTaGGGATTAGCCCTATCCTCC +
Preference number: 5 (lower is better)
Translates to: DTCQLRAEQVLNSNSWEFPKQAP*GLALSS
Trigger: GGAGGATAGGGCTAATCCCAAGGGTGCCTGCTTAGG...AAACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS TCA 90 bp GCTGTGATGGAAAAAGGCCACAAGGCAGGGATCCCAGAGGAAACATaGTGGGCTCAGGGAAAGCATCCTGCAAAGGATAAGACCTTGAGA +
Preference number: 5 (lower is better)
Translates to: AVMEKGHKAGIPEET*WAQGKHPAKDKTLR
Trigger: TCTCAAGGTCTTATCCTTTGCAGGATGCTTTCCCTGAGCCCATCATGTTTCCTCTGGGATCCCTGCCTTGTGGCCTTTTTCCATCACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS CCA 90 bp GGTTCCCAGCAGGACAGCAGAGGTAGGCATAGAAAGCACAAGGGATaGACTACAGAGTTGTCCATGCAGAGTGAGGAGGACTCAGTAATT +
Preference number: 5 (lower is better)
Translates to: GSQQDSRGRHRKHKG*TTELSMQSEEDSVI
Trigger: AATTACTGAGTCCTCCTCACTCTGCATGGACAACTCTGTAGTCCATCCCTTGTGCTTTCTATGCCTACCTCTGCTGTCCTGCTGGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS-3UTR CAA 90 bp GACACATGCCAATTACGTGCGGAACAGGTGCTGAATTCCAATTCCTGGGAGTTTACCCACACCAGACAGTaGAGGTTCTGTGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: DTCQLRAEQVLNSNSWEFTHTRQ*RFCAPQ
Trigger: CTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGT...AAACTCCCAGGAATTGGAATTCAGCACCTGTTCCGCACGTAATTGGCATGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CAA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGACCCACACCAGACAGTaGAGGTTCTGTGCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWTHTRQ*RFCAPQ
Trigger: CTGAGGAGCACAGAACCTCAACTGTCTGGTGTGGGT...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CAA 90 bp GGTGCCATGTCCAAGCAGTGGGAGCCAGTGCGGATAAGAAGAGTTGATTCTGAGCTGGAGTGGCAGAATTaGAACCAGAATCTGATCAGC +
Preference number: 5 (lower is better)
Translates to: GAMSKQWEPVRIRRVDSELEWQN*NQNLIS
Trigger: GCTGATCAGATTCTGGTTCAAATTCTGCCACTCCAG...CTCAGAATCAACTCTTCTTATCCGCACTGGCTCCCACTGCTTGGACATGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS TCA 90 bp GCCCAACATCTGCAGGTTACACAGTGCCTGAGAGCTGGGTCGAAATaGGTCCAGACCACCTGTAAGATGACTTCTCTGGGCATAGTAAAA +
Preference number: 5 (lower is better)
Translates to: AQHLQVTQCLRAGSK*VQTTCKMTSLGIVK
Trigger: TTTTACTATGCCCAGAGAAGTCATCTTACAGGTGGTCTGGACTCATTTCGACCCAGCTCTCAGGCACTGTGTAACCTGCAGATGTTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS CCA 90 bp CTCAGCTGTGCCACTGTCTCTGCTCGGGAAAAGCTTAAACACTTCTaGCCCAGGCTGTGCAAGACAATGTCATTATACTCGGAGAAATCC +
Preference number: 5 (lower is better)
Translates to: LSCATVSAREKLKHF*PRLCKTMSLYSEKS
Trigger: GGATTTCTCCGAGTATAATGACATTGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTTTTCCCGAGCAGAGACAGTGGCACAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475106.2
CDS-3UTR CAA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGGAAGGGGTCCAGCAGTaGCTCCAGCCACCCCACTTT +
Preference number: 5 (lower is better)
Translates to: KHFKLGIRMFADTCQLRAEGVQQ*LQPPHF
Trigger: AAAGTGGGGTGGCTGGAGCAACTGCTGGACCCCTTC...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CAA 90 bp AAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGCGTCTGTCGGACACGTaGAAGGGGTCCAGCAGTTGC +
Preference number: 5 (lower is better)
Translates to: KHFKLGIRMFADTCQLRARLSDT*KGSSSC
Trigger: GCAACTGCTGGACCCCTTCAACGTGTCCGACAGACG...CGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CAA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTCTCTCCTTTGCCAGCTaGAGCCAGGTCTGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: DQQGEGTSISHICLTFNILSFAS*SQVCSC
Trigger: GCAGCTACAGACCTGGCTCAAGCTGGCAAAGGAGAG...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CAA 90 bp CAGCACTTTGTTAGCCCCAGGGGTCTGGCCACCGTAGTAGGAGTTCGTCTGAGCACAAGCTGCTTTCTTTaGTTCAGTGAACAAGTATGT +
Preference number: 5 (lower is better)
Translates to: QHFVSPRGLATVVGVRLSTSCFL*FSEQVC
Trigger: ACATACTTGTTCACTGAACAAAAGAAAGCAGCTTGT...GCTCAGACGAACTCCTACTACGGTGGCCAGACCCCTGGGGCTAACAAAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS CCA 90 bp ATGACCAGAACATTTCTAATACTCCCTTCGAGGAGTTTACAGTCCTaGCAGACAGACTCACACAGTCCCCTGACAGTGATAGCCCACAGT +
Preference number: 5 (lower is better)
Translates to: MTRTFLILPSRSLQS*QTDSHSPLTVIAHS
Trigger: ACTGTGGGCTATCACTGTCAGGGGACTGTGTGAGTCTGTCTGCCAGGACTGTAAACTCCTCGAAGGGAGTATTAGAAATGTTCTGGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS-3UTR CAA 90 bp AAAGTCCAGAAAAAGAAACTTACAGCAAAGCCCCTAACCCAGGAGCTGGAGTGGTTAACAAACAGCACTTaGTTAGCCCCAGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: KVQKKKLTAKPLTQELEWLTNST*LAPGVW
Trigger: CCAGACCCCTGGGGCTAACAAAGTGCTGTTTGTTAA...CCACTCCAGCTCCTGGGTTAGGGGCTTTGCTGTAAGTTTCTTTTTCTGGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CAA 90 bp AAAGCCTGTGTTACACTTAGCACATGCCAGGGGTCTGTGTCCCCATTAACAAACTTAACAAACAGCACTTaGTTAGCCCCAGGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: KACVTLSTCQGSVSPLTNLTNST*LAPGVW
Trigger: CCAGACCCCTGGGGCTAACAAAGTGCTGTTTGTTAA...GTTTGTTAATGGGGACACAGACCCCTGGCATGTGCTAAGTGTAACACAGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000454665.6
ENST00000466364.2
CDS-3UTR CAA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACTCTCCTTTGCCAGCTaGAGCCAGGTCTGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLLSFAS*SQVCSC
Trigger: GCAGCTACAGACCTGGCTCAAGCTGGCAAAGGAGAG...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CAA 90 bp GATCAGCAGGGCGAGGGCACCAGCATAAGTCACATTTGTTTGACATTTAACATTCTGGAGTGGCAGAATTaGAACCAGAATCTGATCAGC +
Preference number: 5 (lower is better)
Translates to: DQQGEGTSISHICLTFNILEWQN*NQNLIS
Trigger: GCTGATCAGATTCTGGTTCAAATTCTGCCACTCCAG...AATGTTAAATGTCAAACAAATGTGACTTATGCTGGTGCCCTCGCCCTGCTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS-3UTR CAA 90 bp GGCCCTGGAAGAAGGAATCTCCACCAGAATCATGAATCCCTAGAGTTGGAAGCTACAAGCTGCTTTCTTTaGTTCAGTGAACAAGTATGT +
Preference number: 5 (lower is better)
Translates to: GPGRRNLHQNHESLELEATSCFL*FSEQVC
Trigger: ACATACTTGTTCACTGAACAAAAGAAAGCAGCTTGT...AGCTTCCAACTCTAGGGATTCATGATTCTGGTGGAGATTCCTTCTTCCAGGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS-3UTR CAA 90 bp CACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACGTGCGGAACTGGAGTGGCAGAATTaGAACCAGAATCTGATCAGC +
Preference number: 5 (lower is better)
Translates to: HFKLGIRMFADTCQLRAELEWQN*NQNLIS
Trigger: GCTGATCAGATTCTGGTTCAAATTCTGCCACTCCAG...TTCCGCACGTAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS GCA 90 bp CAAAGGTCTGGAATGCTCGGAGCTCAAATTGTATTATGTCTGCCCTaGTTAAAACCCATAGCTCACTGTGCTTTCAGGGTAAAGATAACT +
Preference number: 5 (lower is better)
Translates to: QRSGMLGAQIVLCLP*LKPIAHCAFRVKIT
Trigger: AGTTATCTTTACCCTGAAAGCACAGTGAGCTATGGGTTTTAAGCAGGGCAGACATAATACAATTTGAGCTCCGAGCATTCCAGACCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS-3UTR CAA 90 bp GCAATAAAGCACTTTAAGTTGGGAATAAGGATGTTTGCAGACACATGCCAATTACATGAATCCCTAGAGTaGGAAGCTGGAAGTACCAGG +
Preference number: 5 (lower is better)
Translates to: AIKHFKLGIRMFADTCQLHESLE*EAGSTR
Trigger: CCTGGTACTTCCAGCTTCCAACTCTAGGGATTCATG...TAATTGGCATGTGTCTGCAAACATCCTTATTCCCAACTTAAAGTGCTTTATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000421826.6
CDS TCA 90 bp GCCCAAGTTTGCCCAAGATTACGAGTAGAAAATGGAGCTGGAATTTaGACATTTAATTTACCATATGTAGTATTTGGGACATGCTTATAC +
Preference number: 5 (lower is better)
Translates to: AQVCPRLRVENGAGI*TFNLPYVVFGTCLY
Trigger: GTATAAGCATGTCCCAAATACTACATATGGTAAATTAAATGTTCAAATTCCAGCTCCATTTTCTACTCGTAATCTTGGGCAAACTTGGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS GCA 72 bp GCCCAGGGGCCCGCAAGCGCTCAGCTCCGTCCGCAATaGTGCTTGAGCCGCCCCACCCGAGCGCAGCCGCCG +
Preference number: 6 (lower is better)
Translates to: AQGPASAQLRPQ*CLSRPTRAQPP
Trigger: CGGCGGCTGCGCTCGGGTGGGGCGGCTCAAGCAGCATTGCGGACGGAGCTGAGCGCTTGCGGGCCCCTGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230582.8
ENST00000377456.6
ENST00000462664.4
ENST00000468138.5
ENST00000471463.5
ENST00000481125.5
CDS GCA 72 bp CAGGGGCCCGCAAGCGCTCAGCTCCGTCCGCAATGCTaGTTGAGCCGCCCCACCCGAGCGCAGCCGCCGCTC +
Preference number: 6 (lower is better)
Translates to: QGPASAQLRPQC*LSRPTRAQPPL
Trigger: GAGCGGCGGCTGCGCTCGGGTGGGGCGGCTCAAGCAGCATTGCGGACGGAGCTGAGCGCTTGCGGGCCCCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230582.8
ENST00000377456.6
ENST00000462664.4
ENST00000468138.5
ENST00000471463.5
ENST00000481125.5
CDS CAA 72 bp GGGCCCGCAAGCGCTCAGCTCCGTCCGCAATGCTGCTaGAGCCGCCCCACCCGAGCGCAGCCGCCGCTCCAC +
Preference number: 6 (lower is better)
Translates to: GPASAQLRPQCC*SRPTRAQPPLH
Trigger: GTGGAGCGGCGGCTGCGCTCGGGTGGGGCGGCTCAAGCAGCATTGCGGACGGAGCTGAGCGCTTGCGGGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230582.8
ENST00000377456.6
ENST00000462664.4
ENST00000468138.5
ENST00000471463.5
ENST00000481125.5
CDS TCA 72 bp GGCCCGCAAGCGCTCAGCTCCGTCCGCAATGCTGCTTaGGCCGCCCCACCCGAGCGCAGCCGCCGCTCCACT +
Preference number: 6 (lower is better)
Translates to: GPQALSSVRNAA*AAPPERSRRST
Trigger: AGTGGAGCGGCGGCTGCGCTCGGGTGGGGCGGCTCAAGCAGCATTGCGGACGGAGCTGAGCGCTTGCGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230582.8
ENST00000377456.6
ENST00000462664.4
ENST00000468138.5
ENST00000471463.5
ENST00000481125.5
CDS GCA 72 bp CCGCCCGACGAAGCCCGCAGTAGGGCGTGGAGTGGCTaGGGTTGCCCCCGCCCCCGAGGAGAAGTCCGCAGA +
Preference number: 6 (lower is better)
Translates to: PPDEARSRAWSG*GCPRPRGEVRR
Trigger: TCTGCGGACTTCTCCTCGGGGGCGGGGGCAACCGCAGCCACTCCACGCCCTACTGCGGGCTTCGTCGGGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000230582.8
ENST00000377456.6
ENST00000462664.4
ENST00000468138.5
ENST00000471463.5
ENST00000481125.5
CDS CAA 90 bp GCGGCCCAGGGGCCCGCAAGCGCTCAGCTCCGTCCGCAATGCTGCTaGAGCCGCCCCACCCGAGCGCAGCCGCCGCTCCACTTCAGCGAA +
Preference number: 6 (lower is better)
Translates to: AAQGPASAQLRPQCC*SRPTRAQPPLHFSE
Trigger: TTCGCTGAAGTGGAGCGGCGGCTGCGCTCGGGTGGGGCGGCTCAAGCAGCATTGCGGACGGAGCTGAGCGCTTGCGGGCCCCTGGGCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230582.8
ENST00000377456.6
ENST00000462664.4
ENST00000468138.5
ENST00000471463.5
ENST00000481125.5
CDS GCA 72 bp GACGAAGCCCGCAGTAGGGCGTGGAGTGGCTGCGGTTaGCCCCGCCCCCGAGGAGAAGTCCGCAGAGCTGTC +
Preference number: 6 (lower is better)
Translates to: DEARSRAWSGCG*PRPRGEVRRAV
Trigger: GACAGCTCTGCGGACTTCTCCTCGGGGGCGGGGGCAACCGCAGCCACTCCACGCCCTACTGCGGGCTTCGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230582.8
ENST00000377456.6
ENST00000462664.4
ENST00000468138.5
ENST00000471463.5
ENST00000481125.5
CDS GCA 72 bp CCGCCGCCCGGCACTCCAGGGACCCGCCGATCGCGGTaGTCATTAGGCTTCGGGATACCACCTGTGGGCGGA +
Preference number: 6 (lower is better)
Translates to: PPPGTPGTRRSR*SLGFGIPPVGG
Trigger: TCCGCCCACAGGTGGTATCCCGAAGCCTAATGAGCACCGCGATCGGCGGGTCCCTGGAGTGCCGGGCGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481125.5
CDS GCA 72 bp CGCACGCTTAGCGGCGCTCCCGTCTGCCCATCATACTaGACTACACCTCCCACCAGTGCCTGCAGCGCCCCC +
Preference number: 6 (lower is better)
Translates to: RTLSGAPVCPSY*TTPPTSACSAP
Trigger: GGGGGCGCTGCAGGCACTGGTGGGAGGTGTAGTGCAGTATGATGGGCAGACGGGAGCGCCGCTAAGCGTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230582.8
ENST00000377456.6
ENST00000462664.4
ENST00000468138.5
ENST00000471463.5
ENST00000481125.5
CDS GCA 72 bp GACTCCGCCCGCTGGGACCCCTCCCCGTCCCGCACCTaGTGCCCGCCATCCTTACGTCATTATACTCGGAGA +
Preference number: 6 (lower is better)
Translates to: DSARWDPSPSRT*CPPSLRHYTRR
Trigger: TCTCCGAGTATAATGACGTAAGGATGGCGGGCAGCAGGTGCGGGACGGGGAGGGGTCCCAGCGGGCGGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495683.5
CDS GCA 72 bp GGGTCTGTGTCCCCTCCAGGGACCCGCCGATCGCGGTaGTCATTAGGCTTCGGGATACCACCTGTGGGCGGA +
Preference number: 6 (lower is better)
Translates to: GSVSPPGTRRSR*SLGFGIPPVGG
Trigger: TCCGCCCACAGGTGGTATCCCGAAGCCTAATGAGCACCGCGATCGGCGGGTCCCTGGAGGGGACACAGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495683.5
CDS CCA 72 bp GCAGAGGGCCCAGCCACTGGGCAAGCCAGACGGCCATaGTGTTCGGGACTCTGTTCTCCCCCAGGAGGACCT +
Preference number: 6 (lower is better)
Translates to: AEGPATGQARRP*CSGLCSPPGGP
Trigger: AGGTCCTCCTGGGGGAGAACAGAGTCCCGAACACCATGGCCGTCTGGCTTGCCCAGTGGCTGGGCCCTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS CCA 72 bp CCCCAGAGGGAAACCAAGAGCAGAGGGCCCAGCCACTaGGCAAGCCAGACGGCCATGGTGTTCGGGACTCTG +
Preference number: 6 (lower is better)
Translates to: PQRETKSRGPSH*ASQTAMVFGTL
Trigger: CAGAGTCCCGAACACCATGGCCGTCTGGCTTGCCCAGTGGCTGGGCCCTCTGCTCTTGGTTTCCCTCTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000421826.6
ENST00000454665.6
CDS CCA 72 bp GCCTCGGCTTTCCCTACCCAGGACCTGCGTCCTCCTTaGGTTCCCCACTTTCCCCTAGCGGGACTCAGAGGG +
Preference number: 6 (lower is better)
Translates to: ASAFPTQDLRPP*VPHFPLAGLRG
Trigger: CCCTCTGAGTCCCGCTAGGGGAAAGTGGGGAACCCAAGGAGGACGCAGGTCCTGGGTAGGGAAAGCCGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377456.6
ENST00000468138.5
CDS CCA 72 bp TTCAGCGAAGGCGACGGACACCGCCGCCCGGCACTGTaGGAAGCAAGAGGCGATGTCCGCCAAGACTTAGGC +
Preference number: 6 (lower is better)
Translates to: FSEGDGHRRPAL*EARGDVRQDLG
Trigger: GCCTAAGTCTTGGCGGACATCGCCTCTTGCTTCCCACAGTGCCGGGCGGCGGTGTCCGTCGCCTTCGCTGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377456.6
ENST00000468138.5
ENST00000471463.5
CDS CAA 72 bp GGCCTCGGCTTTCCCTACCCAGGACCTGCGTCCTCCTaGGGTTCCCCACTTTCCCCTAGCGGGACTCAGAGG +
Preference number: 6 (lower is better)
Translates to: GLGFPYPGPASS*GSPLSPSGTQR
Trigger: CCTCTGAGTCCCGCTAGGGGAAAGTGGGGAACCCAAGGAGGACGCAGGTCCTGGGTAGGGAAAGCCGAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377456.6
ENST00000468138.5
CDS CAA 90 bp CTTAGGCTGGGCCTCGGCTTTCCCTACCCAGGACCTGCGTCCTCCTaGGGTTCCCCACTTTCCCCTAGCGGGACTCAGAGGGTGCAGACC +
Preference number: 6 (lower is better)
Translates to: LRLGLGFPYPGPASS*GSPLSPSGTQRVQT
Trigger: GGTCTGCACCCTCTGAGTCCCGCTAGGGGAAAGTGGGGAACCCAAGGAGGACGCAGGTCCTGGGTAGGGAAAGCCGAGGCCCAGCCTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377456.6
ENST00000468138.5
CDS GCA 72 bp CCGCCGCCCGGCACTCCAGGGACCCGCCGATCGCGGTaGTCATTAGGCTTCGGGATACCACGTCATTATACT +
Preference number: 6 (lower is better)
Translates to: PPPGTPGTRRSR*SLGFGIPRHYT
Trigger: AGTATAATGACGTGGTATCCCGAAGCCTAATGAGCACCGCGATCGGCGGGTCCCTGGAGTGCCGGGCGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230582.8
CDS GCA 72 bp GGGCAGGAATCTTTGTCCGCTAACTCCTCCCAGCTGTaGCAGGGAGTGCTCACCTGCACCGCCCGACGAAGC +
Preference number: 6 (lower is better)
Translates to: GQESLSANSSQL*QGVLTCTARRS
Trigger: GCTTCGTCGGGCGGTGCAGGTGAGCACTCCCTGGCACAGCTGGGAGGAGTTAGCGGACAAAGATTCCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462664.4
CDS GCA 72 bp GGGGCTGGAGGAGGAGATGTTAAAGAGGCGGGAAAGTaGCAGGCGGGCAGAGACCACATCAGCCAGCGCAAG +
Preference number: 6 (lower is better)
Translates to: GAGGGDVKEAGK*QAGRDHISQRK
Trigger: CTTGCGCTGGCTGATGTGGTCTCTGCCCGCCTGGCACTTTCCCGCCTCTTTAACATCTCCTCCTCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000475106.2
ENST00000485993.4
CDS GCA 72 bp TGCCCATCATACTGCACTACACCTCCCACCAGTGCCTaGAGCGCCCCCAACAGCTCCGCCTGGTTTTCAGCG +
Preference number: 6 (lower is better)
Translates to: CPSYCTTPPTSA*SAPNSSAWFSA
Trigger: CGCTGAAAACCAGGCGGAGCTGTTGGGGGCGCTGCAGGCACTGGTGGGAGGTGTAGTGCAGTATGATGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230582.8
ENST00000377456.6
ENST00000462664.4
ENST00000468138.5
ENST00000471463.5
ENST00000481125.5
CDS CCA 72 bp TCAGCCAGCGCAAGGCGGCTGGACAAGAAGCGGAGCTaGGCCATTTCCAGGCCTCCAGCAGGTATACTCAGG +
Preference number: 6 (lower is better)
Translates to: SASARRLDKKRS*AISRPPAGILR
Trigger: CCTGAGTATACCTGCTGGAGGCCTGGAAATGGCCCAGCTCCGCTTCTTGTCCAGCCGCCTTGCGCTGGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000475106.2
ENST00000485993.4
CDS CCA 72 bp TGGGAAGCAAGAGGCGATGTCCGCCAAGACTTAGGCTaGGCCTCGGCTTTCCCTACCCAGGACCTGCGTCCT +
Preference number: 6 (lower is better)
Translates to: WEARGDVRQDLG*ASAFPTQDLRP
Trigger: AGGACGCAGGTCCTGGGTAGGGAAAGCCGAGGCCCAGCCTAAGTCTTGGCGGACATCGCCTCTTGCTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377456.6
ENST00000468138.5
ENST00000471463.5
CDS GCA 72 bp CGGGATGGCCTCTCATCACTGAGCCAGGCCCAAGGCTaGCCTCACCCCCTAGATGCAGGAATATGGGTCCAT +
Preference number: 6 (lower is better)
Translates to: RDGLSSLSQAQG*PHPLDAGIWVH
Trigger: ATGGACCCATATTCCTGCATCTAGGGGGTGAGGGCAGCCTTGGGCCTGGCTCAGTGATGAGAGGCCATCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230582.8
ENST00000470870.5
CDS GCA 72 bp CCTCCTCTTCGTCAGCTCCCGCCTTCTTCCAAAACCTaGGTATTCCCCCGAGCTCCGACCTTCCTTAGACCC +
Preference number: 6 (lower is better)
Translates to: PPLRQLPPSSKT*VFPRAPTFLRP
Trigger: GGGTCTAAGGAAGGTCGGAGCTCGGGGGAATACGCAGGTTTTGGAAGAAGGCGGGAGCTGACGAAGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000459736.5
ENST00000478690.5
ENST00000484493.5
CDS CAA 90 bp TTCTCGCTTGCCCAAGATCACACAACGGAAGTGGGGCAGGAATCTTaGTCCGCTAACTCCTCCCAGCTGTGCCAGGGAGTGCTCACCTGC +
Preference number: 6 (lower is better)
Translates to: FSLAQDHTTEVGQES*SANSSQLCQGVLTC
Trigger: GCAGGTGAGCACTCCCTGGCACAGCTGGGAGGAGTTAGCGGACAAAGATTCCTGCCCCACTTCCGTTGTGTGATCTTGGGCAAGCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462664.4
CDS CCA 72 bp GCCACTGTCTCTGCTCGGGAAAAGCTTAAACACTTCTaGCCCAGGCTGTGCAAGACAATCTGCACCGCCCGA +
Preference number: 6 (lower is better)
Translates to: ATVSAREKLKHF*PRLCKTICTAR
Trigger: TCGGGCGGTGCAGATTGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTTTTCCCGAGCAGAGACAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230582.8
ENST00000468138.5
ENST00000481125.5
CDS CCA 72 bp GCCACTGTCTCTGCTCGGGAAAAGCTTAAACACTTCTaGCCCAGGCTGTGCAAGACAATCTCCAGGGACCCG +
Preference number: 6 (lower is better)
Translates to: ATVSAREKLKHF*PRLCKTISRDP
Trigger: CGGGTCCCTGGAGATTGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTTTTCCCGAGCAGAGACAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488649.5
ENST00000492575.5
CDS CCA 72 bp GCCACTGTCTCTGCTCGGGAAAAGCTTAAACACTTCTaGCCCAGGCTGTGCAAGACAATCTTCAGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: ATVSAREKLKHF*PRLCKTIFSRA
Trigger: GGCCCGGCTGAAGATTGTCTTGCACAGCCTGGGCCAGAAGTGTTTAAGCTTTTCCCGAGCAGAGACAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485993.4
CDS GCA 72 bp CAAGACAATCTCTCATCACTGAGCCAGGCCCAAGGCTaGCCTCACCCCCTAGATGCAGGAATATGGGTCCAT +
Preference number: 6 (lower is better)
Translates to: QDNLSSLSQAQG*PHPLDAGIWVH
Trigger: ATGGACCCATATTCCTGCATCTAGGGGGTGAGGGCAGCCTTGGGCCTGGCTCAGTGATGAGAGATTGTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454665.6
CDS TCA 72 bp CTGCAGGTTACACAGTGCCTGAGAGCTGGGTCGAAATaGGTCCAGACCACCTGTAAGATGACTTCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: LQVTQCLRAGSK*VQTTCKMTSLG
Trigger: GCCCAGAGAAGTCATCTTACAGGTGGTCTGGACTCATTTCGACCCAGCTCTCAGGCACTGTGTAACCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS TCA 72 bp CTTCTCCAGCCCAACATCTGCAGGTTACACAGTGCCTaGGAGCTGGGTCGAAATGAGTCCAGACCACCTGTA +
Preference number: 6 (lower is better)
Translates to: LLQPNICRLHSA*ELGRNESRPPV
Trigger: TACAGGTGGTCTGGACTCATTTCGACCCAGCTCTCAGGCACTGTGTAACCTGCAGATGTTGGGCTGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS GCA 72 bp TCTGAGGATCCTAAAGCCTGTGTTACACTTAGCACATaGCAGGGGTCTGTGTCCCAGAAGCCGAACTCGGTA +
Preference number: 6 (lower is better)
Translates to: SEDPKACVTLST*QGSVSQKPNSV
Trigger: TACCGAGTTCGGCTTCTGGGACACAGACCCCTGGCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000459736.5
ENST00000481125.5
ENST00000492575.5
CDS GCA 72 bp TCTGAGGATCCTAAAGCCTGTGTTACACTTAGCACATaGCAGGGGTCTGTGTCCCCTCCGGATAGGATTGTC +
Preference number: 6 (lower is better)
Translates to: SEDPKACVTLST*QGSVSPPDRIV
Trigger: GACAATCCTATCCGGAGGGGACACAGACCCCTGGCATGTGCTAAGTGTAACACAGGCTTTAGGATCCTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478690.5
CDS CCA 72 bp CAGGACAGCAGAGGTAGGCATAGAAAGCACAAGGGATaGACTACAGAGTTGTCCATGCAGAGTGAGGAGGAC +
Preference number: 6 (lower is better)
Translates to: QDSRGRHRKHKG*TTELSMQSEED
Trigger: GTCCTCCTCACTCTGCATGGACAACTCTGTAGTCCATCCCTTGTGCTTTCTATGCCTACCTCTGCTGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS TCA 72 bp GAAAAAGGCCACAAGGCAGGGATCCCAGAGGAAACATaGTGGGCTCAGGGAAAGCATCCTGCAAAGGATAAG +
Preference number: 6 (lower is better)
Translates to: EKGHKAGIPEET*WAQGKHPAKDK
Trigger: CTTATCCTTTGCAGGATGCTTTCCCTGAGCCCATCATGTTTCCTCTGGGATCCCTGCCTTGTGGCCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS CCA 72 bp CAGAGAAAGAATAGGCTGAAGGGAAGATCACTCAAGTaGAGACCTCAGTGTGTGCGTGAGGAGGCATGTGAG +
Preference number: 6 (lower is better)
Translates to: QRKNRLKGRSLK*RPQCVREEACE
Trigger: CTCACATGCCTCCTCACGCACACACTGAGGTCTCCACTTGAGTGATCTTCCCTTCAGCCTATTCTTTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS CAA 90 bp GACAGCAGAGGTAGGCATAGAAAGCACAAGGGATGGACTACAGAGTaGTCCATGCAGAGTGAGGAGGACTCAGTAATTGACAGGCTAGCT +
Preference number: 6 (lower is better)
Translates to: DSRGRHRKHKGWTTE*SMQSEEDSVIDRLA
Trigger: AGCTAGCCTGTCAATTACTGAGTCCTCCTCACTCTGCATGGACAACTCTGTAGTCCATCCCTTGTGCTTTCTATGCCTACCTCTGCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS CCA 72 bp ACATTTCTAATACTCCCTTCGAGGAGTTTACAGTCCTaGCAGACAGACTCACACAGTCCCCTGACAGTGATA +
Preference number: 6 (lower is better)
Translates to: TFLILPSRSLQS*QTDSHSPLTVI
Trigger: TATCACTGTCAGGGGACTGTGTGAGTCTGTCTGCCAGGACTGTAAACTCCTCGAAGGGAGTATTAGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS GCA 72 bp GGAATGCTCGGAGCTCAAATTGTATTATGTCTGCCCTaGTTAAAACCCATAGCTCACTGTGCTTTCAGGGTA +
Preference number: 6 (lower is better)
Translates to: GMLGAQIVLCLP*LKPIAHCAFRV
Trigger: TACCCTGAAAGCACAGTGAGCTATGGGTTTTAAGCAGGGCAGACATAATACAATTTGAGCTCCGAGCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485603.1
CDS GCA 72 bp ATTATGTCTGCCCTGCTTAAAACCCATAGCTCACTGTaGTTTCAGGGTAAAGATAACTTCTGTAACATCAGA +
Preference number: 6 (lower is better)
Translates to: IMSALLKTHSSL*FQGKDNFCNIR
Trigger: TCTGATGTTACAGAAGTTATCTTTACCCTGAAAGCACAGTGAGCTATGGGTTTTAAGCAGGGCAGACATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485603.1