Pregenerated sensors for PRSS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000204983, ENSG00000274247Ensembl transcript IDs: ENST00000463701.1, ENST00000485223.1, ENST00000631597.1, ENST00000632438.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGGGTAGCCATAGCATTAGCATCTCCTGGGAACTTGTTAGAAATGTaGATTCTTGGTCCTTACCCCCACCTACTGATCAGAACCTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: RVAIALASPGNLLEM*ILGPYPHLLIRTLG Trigger: CCCCAAGGTTCTGATCAGTAGGTGGGGGTAAGGACCAAGAATTCACATTTCTAACAAGTTCCCAGGAGATGCTAATGCTATGGCTACCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000463701.1 ENST00000485223.1 |
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| CDS TCA 90 bp | AGCGTAGCCATAGCATTAGCATCTCCTGGGAACTTGTTAGAAATGTaGATTCTTGGTCCTTACCCCCACCTACTGATCAGAACCTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SVAIALASPGNLLEM*ILGPYPHLLIRTLG Trigger: CCCCAAGGTTCTGATCAGTAGGTGGGGGTAAGGACCAAGAATTCACATTTCTAACAAGTTCCCAGGAGATGCTAATGCTATGGCTACGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000631597.1 ENST00000632438.1 |
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| CDS GCA 72 bp | CTGATCAGAACCTTGGGGAAGGGGCCCAGTGATTTGTaGCTTAACAAGCCTGCAGGGCGTTCTGATGCATAC | + |
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Preference number: 6 (lower is better) Translates to: LIRTLGKGPSDL*LNKPAGRSDAY Trigger: GTATGCATCAGAACGCCCTGCAGGCTTGTTAAGGCACAAATCACTGGGCCCCTTCCCCAAGGTTCTGATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000463701.1 ENST00000485223.1 ENST00000631597.1 ENST00000632438.1 |
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| CDS CAA 72 bp | CTACTGATCAGAACCTTGGGGAAGGGGCCCAGTGATTaGTGCCTTAACAAGCCTGCAGGGCGTTCTGATGCA | + |
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Preference number: 6 (lower is better) Translates to: LLIRTLGKGPSD*CLNKPAGRSDA Trigger: TGCATCAGAACGCCCTGCAGGCTTGTTAAGGCACAAATCACTGGGCCCCTTCCCCAAGGTTCTGATCAGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000463701.1 ENST00000485223.1 ENST00000631597.1 ENST00000632438.1 |
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