Pregenerated sensors for PRRX2 (Homo sapiens)
Ensembl gene IDs: ENSG00000167157Ensembl transcript IDs: ENST00000372469.6
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGCTGCAGGGGCCTCAACAGCCTCGTGGGCTCGGGAGTCCAGGCTaGACAGACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCC | + |
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Preference number: 1 (lower is better) Translates to: RLQGPQQPRGLGSPG*TDGPGELIQEKVTS Trigger: GGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTCTGTCCAGCCTGGACTCCCGAGCCCACGAGGCTGTTGAGGCCCCTGCAGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| 3UTR GCA 90 bp | CAGGCTCTTCCACCTTCCGGCCCAACCCCTCCAAGGGTTGTGGGCTaGAGTCTCTGGTGGCCAAGGACAGAAGAGCTGGGCCCGGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: QALPPSGPTPPRVVG*SLWWPRTEELGPAA Trigger: TGCAGCCGGGCCCAGCTCTTCTGTCCTTGGCCACCAGAGACTGCAGCCCACAACCCTTGGAGGGGTTGGGCCGGAAGGTGGAAGAGCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| 3UTR GCA 90 bp | CGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTaGCCCCTTTTCTATTGCTGTCCACCCAGGGAGGCGTCTGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: RARRAHPGEGHFLGV*PLFYCCPPREASGS Trigger: GGACCCAGACGCCTCCCTGGGTGGACAGCAATAGAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| 3UTR GCA 90 bp | CATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCTATTaGTGTCCACCCAGGGAGGCGTCTGGGTCCTGGTGGGACTGGACT | + |
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Preference number: 1 (lower is better) Translates to: HPGEGHFLGVCPLFY*CPPREASGSWWDWT Trigger: AGTCCAGTCCCACCAGGACCCAGACGCCTCCCTGGGTGGACAGCAATAGAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCGGCCCAACCCCTCCAAGGGTTGTGGGCTGCAGTCTCTGGTGGCCAAGGCTCGGGAGTCCAGGCTaGACAGACGGGCCAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: PSGPTPPRVVGCSLWWPRLGSPG*TDGPGE Trigger: CTCTCCTGGCCCGTCTGTCCAGCCTGGACTCCCGAG...CCTTGGCCACCAGAGACTGCAGCCCACAACCCTTGGAGGGGTTGGGCCGGAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| 3UTR-3UTR CCA 90 bp | CCCGGCTGCAGGGGCCTCAACAGCCTCGTGGGCTCGGGAGTCCAGGCTGGACAGGAGAAGGTCACTTCCTaGGCGTCTGCCCCCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PGCRGLNSLVGSGVQAGQEKVTS*ASAPFS Trigger: AGAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTC...CTGTCCAGCCTGGACTCCCGAGCCCACGAGGCTGTTGAGGCCCCTGCAGCCGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| 3UTR-3UTR GCA 90 bp | CCGGCTGCAGGGGCCTCAACAGCCTCGTGGGCTCGGGAGTCCAGGCTGGACAGACACTTCCTGGGCGTCTaGCCCCTTTTCTATTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: PAAGASTASWARESRLDRHFLGV*PLFYCC Trigger: ACAGCAATAGAAAAGGGGGCAGACGCCCAGGAAGTG...TCTGTCCAGCCTGGACTCCCGAGCCCACGAGGCTGTTGAGGCCCCTGCAGCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| 3UTR CAA 90 bp | TCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCTATaGCTGTCCACCCAGGGAGGCGTCTGGGTCCTGGTGGGACTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SSRRRSLPGRLPPFL*LSTQGGVWVLVGLD Trigger: GTCCAGTCCCACCAGGACCCAGACGCCTCCCTGGGTGGACAGCAATAGAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTGGACAGACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGTGCCCCCTTTTCTATTaGTGTCCACCCAGGGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: QAGQTGQESSSRRRSLPGCPLFY*CPPREA Trigger: CGCCTCCCTGGGTGGACAGCAATAGAAAAGGGGGCA...CCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTCTGTCCAGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| 3UTR-3UTR CCA 90 bp | AGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCTATTGCTGACCCAGGGAGGCGTCTaGGTCCTGGTGGGACTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SSSRRRSLPGRLPPFLLLTQGGV*VLVGLD Trigger: GTCCAGTCCCACCAGGACCCAGACGCCTCCCTGGGT...CAGCAATAGAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| 3UTR GCA 72 bp | TCTCTGGTGGCCAAGGACAGAAGAGCTGGGCCCGGCTaGAGGGGCCTCAACAGCCTCGTGGGCTCGGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: SLVAKDRRAGPG*RGLNSLVGSGV Trigger: GACTCCCGAGCCCACGAGGCTGTTGAGGCCCCTGCAGCCGGGCCCAGCTCTTCTGTCCTTGGCCACCAGAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| 3UTR CCA 72 bp | GGGCCTCAACAGCCTCGTGGGCTCGGGAGTCCAGGCTaGACAGACGGGCCAGGAGAGCTCATCCAGGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: GPQQPRGLGSPG*TDGPGELIQEK Trigger: CTTCTCCTGGATGAGCTCTCCTGGCCCGTCTGTCCAGCCTGGACTCCCGAGCCCACGAGGCTGTTGAGGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| 3UTR CCA 72 bp | CCAACCCCTCCAAGGGTTGTGGGCTGCAGTCTCTGGTaGCCAAGGACAGAAGAGCTGGGCCCGGCTGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: PTPPRVVGCSLW*PRTEELGPAAG Trigger: CCCTGCAGCCGGGCCCAGCTCTTCTGTCCTTGGCCACCAGAGACTGCAGCCCACAACCCTTGGAGGGGTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| 3UTR CCA 72 bp | GGCCCAACCCCTCCAAGGGTTGTGGGCTGCAGTCTCTaGTGGCCAAGGACAGAAGAGCTGGGCCCGGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: GPTPPRVVGCSL*WPRTEELGPAA Trigger: TGCAGCCGGGCCCAGCTCTTCTGTCCTTGGCCACCAGAGACTGCAGCCCACAACCCTTGGAGGGGTTGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| 3UTR GCA 72 bp | CCACCTTCCGGCCCAACCCCTCCAAGGGTTGTGGGCTaGAGTCTCTGGTGGCCAAGGACAGAAGAGCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: PPSGPTPPRVVG*SLWWPRTEELG Trigger: GCCCAGCTCTTCTGTCCTTGGCCACCAGAGACTGCAGCCCACAACCCTTGGAGGGGTTGGGCCGGAAGGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR GCA 90 bp | GCAGGGGCCTCAACAGCCTCGTGGGCTCGGGAGTCCAGGCTGGACAGACGGGCCGGACACTCACCATCCTaGGGCGCCGCCTCGCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: AGASTASWARESRLDRRAGHSPS*GAASLP Trigger: CGGCAGCGAGGCGGCGCCGCAGGATGGTGAGTGTCC...GGCCCGTCTGTCCAGCCTGGACTCCCGAGCCCACGAGGCTGTTGAGGCCCCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR GCA 90 bp | GCAGGCTCTTCCACCTTCCGGCCCAACCCCTCCAAGGGTTGTGGGCTGCAGTCTCGGGGAGCCACGGGCTaGTCGATGGCGGCCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: AGSSTFRPNPSKGCGLQSRGATG*SMAASW Trigger: CCAGGAGGCCGCCATCGAGCAGCCCGTGGCTCCCCG...AGACTGCAGCCCACAACCCTTGGAGGGGTTGGGCCGGAAGGTGGAAGAGCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | GCTGCAGGGGCCTCAACAGCCTCGTGGGCTCGGGAGTCCAGGCTGGACAGACGGCAAGGACAGAAGAGCTaGGCCCGGCTGCAGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: AAGASTASWARESRLDRRQGQKS*ARLQGP Trigger: AGGCCCCTGCAGCCGGGCCCAGCTCTTCTGTCCTTG...CCGTCTGTCCAGCCTGGACTCCCGAGCCCACGAGGCTGTTGAGGCCCCTGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | GGCAGGCTCTTCCACCTTCCGGCCCAACCCCTCCAAGGGTTGTGGGCTGCAGTCCCACGGGCTGCTCGATaGCGGCCTCCTGGCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GRLFHLPAQPLQGLWAAVPRAAR*RPPGCR Trigger: CCTACAGCCAGGAGGCCGCCATCGAGCAGCCCGTGG...GACTGCAGCCCACAACCCTTGGAGGGGTTGGGCCGGAAGGTGGAAGAGCCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | GCTGCAGGGGCCTCAACAGCCTCGTGGGCTCGGGAGTCCAGGCTGGACAGACGGCCCCTCCAAGGGTTGTaGGCTGCAGTCTCTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: AAGASTASWARESRLDRRPLQGL*AAVSGG Trigger: GCCACCAGAGACTGCAGCCCACAACCCTTGGAGGGG...CCGTCTGTCCAGCCTGGACTCCCGAGCCCACGAGGCTGTTGAGGCCCCTGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | GGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTAAGTTCTTGCGCGCCTaGGCGCAGTCGCCGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GPGELIQEKVTSWASAPFKFLRA*AQSPGP Trigger: GGGGCCCGGCGACTGCGCCCAGGCGCGCAAGAACTT...AAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR TCA 90 bp | GACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCGCAGTTGGCTGCTGTTaGACGTGGTGCGGTTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: DGPGELIQEKVTSWASAPAVGCC*TWCGSA Trigger: GGCGGAACCGCACCACGTTCAACAGCAGCCAACTGC...GGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGACAGACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGTACCGCGCCCCGGGCTaGGACACTCACCATCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: QAGQTGQESSSRRRSLPGYRAPG*DTHHPA Trigger: CGCAGGATGGTGAGTGTCCCAGCCCGGGGCGCGGTA...CCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTCTGTCCAGCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | GGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTGCTTCTTCTTCCGCTTaGCGGCGCTACCGCGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: GPGELIQEKVTSWASAPFASSSA*RRYRAP Trigger: CGGGGCGCGGTAGCGCCGCCAAGCGGAAGAAGAAGC...AAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | GACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCGCGAGGCAGAGCGGCTaGCCAGCATGGCCCTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: DGPGELIQEKVTSWASAPARQSG*PAWPFH Trigger: ATGAAAGGGCCATGCTGGCCAGCCGCTCTGCCTCGC...GGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | GGCAGGCTCTTCCACCTTCCGGCCCAACCCCTCCAAGGGTTGTGGGCTGCAGTCCCCAGGGCTGTAGGGTaGCACTGTGCTGTAGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GRLFHLPAQPLQGLWAAVPRAVG*HCAVGG Trigger: TCCCCCTACAGCACAGTGCCACCCTACAGCCCTGGG...GACTGCAGCCCACAACCCTTGGAGGGGTTGGGCCGGAAGGTGGAAGAGCCTGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | GCTGCAGGGGCCTCAACAGCCTCGTGGGCTCGGGAGTCCAGGCTGGACAGACGGTTCACCGTAGGCACCTaGCTGTGGTGCAGGCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: AAGASTASWARESRLDRRFTVGT*LWCRLN Trigger: GTTCAGCCTGCACCACAGCCAGGTGCCTACGGTGAA...CCGTCTGTCCAGCCTGGACTCCCGAGCCCACGAGGCTGTTGAGGCCCCTGCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | AGACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCACCCAGGGAGGCGTCTaGGTCCTGGTGGGACTGGAC | + |
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Preference number: 4 (lower is better) Translates to: RRARRAHPGEGHFLGVCPTQGGV*VLVGLD Trigger: GTCCAGTCCCACCAGGACCCAGACGCCTCCCTGGGT...GGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | ACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTCTCGGGAGTCCAGGCTaGACAGACGGGCCAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TGQESSSRRRSLPGRLPPLGSPG*TDGPGE Trigger: CTCTCCTGGCCCGTCTGTCCAGCCTGGACTCCCGAG...AGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR TCA 90 bp | GCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCCGGCCCGCCCGGCGCTaGCGTCGGGGAAACAAACTT | + |
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Preference number: 4 (lower is better) Translates to: ARRAHPGEGHFLGVCPLFRPARR*RRGNKL Trigger: AAGTTTGTTTCCCCGACGTCAGCGCCGGGCGGGCCG...GAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR TCA 90 bp | GGACAGACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCTGGCTGTAGGACTTaGGCAGCGAGGCAGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GQTGQESSSRRRSLPGRLPGCRT*AARQSG Trigger: GCCGCTCTGCCTCGCTGCTCAAGTCCTACAGCCAGG...CAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTCTGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR GCA 90 bp | GCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCAGAGCTGGGCCCGGCTaGAGGGGCCTCAACAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: ARRAHPGEGHFLGVCPLFRAGPG*RGLNSL Trigger: GAGGCTGTTGAGGCCCCTGCAGCCGGGCCCAGCTCT...GAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR GCA 90 bp | CAGGCTGGACAGACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGGTGCGGTTCCGCCGCTaGTTCTTCTTCCGCTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: QAGQTGQESSSRRRSLPGVRFRR*FFFRLA Trigger: CGCCAAGCGGAAGAAGAAGCAGCGGCGGAACCGCAC...CCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTCTGTCCAGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR GCA 90 bp | GCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCCGTCGGGGTAGTGCGTaGGCTCGAACACGCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ARRAHPGEGHFLGVCPLFRRGSA*ARTRAP Trigger: TGGAGCGCGTGTTCGAGCGCACGCACTACCCCGACG...GAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR GCA 90 bp | ACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTGGCCCTTTCATTCCTaGGGAACTTGGCGCGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: TGQESSSRRRSLPGRLPPWPFHS*GTWRGG Trigger: ACCGCCGCGCCAAGTTCCGCAGGAATGAAAGGGCCA...AGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR GCA 90 bp | GCAGGCTCTTCCACCTTCCGGCCCAACCCCTCCAAGGGTTGTGGGCTGCAGTCTCCAAGGGTTGTGGGCTaGAGTCTCTGGTGGCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: AGSSTFRPNPSKGCGLQSPRVVG*SLWWPR Trigger: CCTTGGCCACCAGAGACTGCAGCCCACAACCCTTGG...AGACTGCAGCCCACAACCCTTGGAGGGGTTGGGCCGGAAGGTGGAAGAGCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR GCA 90 bp | GGACAGACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGACGCGCTCCAGCGCCTaGAGTTGGCTGCTGTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: GQTGQESSSRRRSLPGRLTRSSA*SWLLLN Trigger: GTTCAACAGCAGCCAACTGCAGGCGCTGGAGCGCGT...CAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTCTGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR GCA 90 bp | AGACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCTGCCCCCTTTTCTATTaGTGTCCACCCAGGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: RRARRAHPGEGHFLGVCPCPLFY*CPPREA Trigger: CGCCTCCCTGGGTGGACAGCAATAGAAAAGGGGGCA...GGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | AGACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCGGGTCCTGGTGGGACTaGACTTCAGTTCACCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: RRARRAHPGEGHFLGVCPGSWWD*TSVHRR Trigger: CCTACGGTGAACTGAAGTCCAGTCCCACCAGGACCC...GGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | AGACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCGTGGGCTGCAGTCTCTaGTGGCCAAGGACAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: RRARRAHPGEGHFLGVCPVGCSL*WPRTEE Trigger: CTCTTCTGTCCTTGGCCACCAGAGACTGCAGCCCAC...GGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR GCA 90 bp | CCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCTTCACCGAGAAGTTCTTaGGCGCCTGGGCGCAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: PGELIQEKVTSWASAPFSSPRSS*APGRSR Trigger: GCGACTGCGCCCAGGCGCGCAAGAACTTCTCGGTGA...AGAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | GGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCCAGCGCCTGCAGTTaGCTGCTGTTGAACGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GPGELIQEKVTSWASAPFSSACS*LLLNVV Trigger: CACCACGTTCAACAGCAGCCAACTGCAGGCGCTGGA...AAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | GCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCCCAGGAGAGATAATCTaGACTCAGGGCGGTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: ARRAHPGEGHFLGVCPLFPGEII*TQGGGP Trigger: CGGCCCACCGCCCTGAGTCCAGATTATCTCTCCTGG...GAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | GGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTGTAGGCACCTGGCTGTaGTGCAGGCTGAACTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: GPGELIQEKVTSWASAPFVGTWL*CRLNSL Trigger: CAAGGAGTTCAGCCTGCACCACAGCCAGGTGCCTAC...AAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR GCA 90 bp | GGCTGGACAGACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGCACTTCCTGGGCGTCTaGCCCCTTTTCTATTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GWTDGPGELIQEKVTSWAHFLGV*PLFYCC Trigger: ACAGCAATAGAAAAGGGGGCAGACGCCCAGGAAGTG...CGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTCTGTCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGACAGACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGGAGAAGGTCACTTCCTaGGCGTCTGCCCCCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: QAGQTGQESSSRRRSLPGEKVTS*ASAPFS Trigger: AGAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTC...CCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTCTGTCCAGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR GCA 90 bp | AGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCTATTGCTGGGCACCTGGCTGTGGTaGAGGCTGAACTCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SSSRRRSLPGRLPPFLLLGTWLW*RLNSLA Trigger: GGCCAAGGAGTTCAGCCTGCACCACAGCCAGGTGCC...CAGCAATAGAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CCA 90 bp | CCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCTGGCTGCAGTCTCTGGTaGCCAAGGACAGAAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PGELIQEKVTSWASAPFSGCSLW*PRTEEL Trigger: CAGCTCTTCTGTCCTTGGCCACCAGAGACTGCAGCC...AGAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR TCA 90 bp | TCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCTATTGCTGTCCACCAATACACAAACTAAATaGGGTCCTTGGCAGGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SRRRSLPGRLPPFLLLSTNTQTK*GPWQAL Trigger: AAGAGCCTGCCAAGGACCTCATTTAGTTTGTGTATT...GGTGGACAGCAATAGAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS CCA 90 bp | AGGGGGACGAGGCTGTCCAGGAGAGATAATCTGGACTCAGGGCGGTaGGCCGGGGAGCCACGGGCTGCTCGATGGCGGCCTCCTGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: RGTRLSRRDNLDSGR*AGEPRAARWRPPGC Trigger: ACAGCCAGGAGGCCGCCATCGAGCAGCCCGTGGCTCCCCGGCCCACCGCCCTGAGTCCAGATTATCTCTCCTGGACAGCCTCGTCCCCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CAA 90 bp | CCGGCTGCAGGGGCCTCAACAGCCTCGTGGGCTCGGGAGTCCAGGCTGGACAGACTCACCGAGAAGTTCTaGCGCGCCTGGGCGCAGTCG | + |
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Preference number: 5 (lower is better) Translates to: PAAGASTASWARESRLDRLTEKF*RAWAQS Trigger: CGACTGCGCCCAGGCGCGCAAGAACTTCTCGGTGAG...TCTGTCCAGCCTGGACTCCCGAGCCCACGAGGCTGTTGAGGCCCCTGCAGCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS TCA 90 bp | GGGGAGCCACGGGCTGCTCGATGGCGGCCTCCTGGCTGTAGGACTTaGGCAGCGAGGCAGAGCGGCTGGCCAGCATGGCCCTTTCATTCC | + |
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Preference number: 5 (lower is better) Translates to: GEPRAARWRPPGCRT*AARQSGWPAWPFHS Trigger: GGAATGAAAGGGCCATGCTGGCCAGCCGCTCTGCCTCGCTGCTCAAGTCCTACAGCCAGGAGGCCGCCATCGAGCAGCCCGTGGCTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS CCA 90 bp | TGGCACTGTGCTGTAGGGGGACGAGGCTGTCCAGGAGAGATAATCTaGACTCAGGGCGGTGGGCCGGGGAGCCACGGGCTGCTCGATGGC | + |
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Preference number: 5 (lower is better) Translates to: WHCAVGGRGCPGEII*TQGGGPGSHGLLDG Trigger: GCCATCGAGCAGCCCGTGGCTCCCCGGCCCACCGCCCTGAGTCCAGATTATCTCTCCTGGACAGCCTCGTCCCCCTACAGCACAGTGCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CAA 90 bp | CCGGCTGCAGGGGCCTCAACAGCCTCGTGGGCTCGGGAGTCCAGGCTGGACAGACTCCAGCGCCTGCAGTaGGCTGCTGTTGAACGTGGT | + |
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Preference number: 5 (lower is better) Translates to: PAAGASTASWARESRLDRLQRLQ*AAVERG Trigger: ACCACGTTCAACAGCAGCCAACTGCAGGCGCTGGAG...TCTGTCCAGCCTGGACTCCCGAGCCCACGAGGCTGTTGAGGCCCCTGCAGCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CAA 90 bp | GGACAGACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGTGCTTCTTCTTCCGCTaGGCGGCGCTACCGCGCCCC | + |
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Preference number: 5 (lower is better) Translates to: GQTGQESSSRRRSLPGRLCFFFR*AALPRP Trigger: GGGGCGCGGTAGCGCCGCCAAGCGGAAGAAGAAGCA...CAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTCTGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CAA 90 bp | GACGGGCCAGGAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCCTGAACTCCTTGGCCTaGAGACGGAGGCTGGCGATG | + |
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Preference number: 5 (lower is better) Translates to: DGPGELIQEKVTSWASAPLNSLA*RRRLAM Trigger: CATCGCCAGCCTCCGTCTCAAGGCCAAGGAGTTCAG...GGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTCCTGGCCCGTC 64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CAA 90 bp | CCTTCCGGCCCAACCCCTCCAAGGGTTGTGGGCTGCAGTCTCTGGTGGCCAAGGTGCAGGCTGAACTCCTaGGCCTTGAGACGGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: PSGPTPPRVVGCSLWWPRCRLNS*ALRRRL Trigger: CAGCCTCCGTCTCAAGGCCAAGGAGTTCAGCCTGCA...CCTTGGCCACCAGAGACTGCAGCCCACAACCCTTGGAGGGGTTGGGCCGGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CAA 90 bp | GAGAGCTCATCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCTATTGCGCGCCTCGCTGAGGTaGACGCGCCGGGCAAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: ESSSRRRSLPGRLPPFLLRASLR*TRRASS Trigger: GGAGCTTGCCCGGCGCGTCAACCTCAGCGAGGCGCG...CAATAGAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGATGAGCTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS CCA 90 bp | CCCCTTTTCTATTGCTGTCCACCCAGGGAGGCGTCTGGGTCCTGGTaGGACTGGACTTCAGTTCACCGTAGGCACCTGGCTGTGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: PLFYCCPPREASGSW*DWTSVHRRHLAVVQ Trigger: CTGCACCACAGCCAGGTGCCTACGGTGAACTGAAGTCCAGTCCCACCAGGACCCAGACGCCTCCCTGGGTGGACAGCAATAGAAAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS CCA 90 bp | TGCCCCCTTTTCTATTGCTGTCCACCCAGGGAGGCGTCTGGGTCCTaGTGGGACTGGACTTCAGTTCACCGTAGGCACCTGGCTGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: CPLFYCCPPREASGS*WDWTSVHRRHLAVV Trigger: CACCACAGCCAGGTGCCTACGGTGAACTGAAGTCCAGTCCCACCAGGACCCAGACGCCTCCCTGGGTGGACAGCAATAGAAAAGGGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS CCA 90 bp | TTCTATTGCTGTCCACCCAGGGAGGCGTCTGGGTCCTGGTGGGACTaGACTTCAGTTCACCGTAGGCACCTGGCTGTGGTGCAGGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: FYCCPPREASGSWWD*TSVHRRHLAVVQAE Trigger: TTCAGCCTGCACCACAGCCAGGTGCCTACGGTGAACTGAAGTCCAGTCCCACCAGGACCCAGACGCCTCCCTGGGTGGACAGCAATAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CAA 90 bp | TCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCTATTGCTGTCCACCTGCAGTTGGCTGCTGTaGAACGTGGTGCGGTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: SRRRSLPGRLPPFLLLSTCSWLL*NVVRFR Trigger: GCGGAACCGCACCACGTTCAACAGCAGCCAACTGCA...GGTGGACAGCAATAGAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS-3UTR CAA 90 bp | TCCAGGAGAAGGTCACTTCCTGGGCGTCTGCCCCCTTTTCTATTGCTGTCCACCCAACCCCTCCAAGGGTaGTGGGCTGCAGTCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: SRRRSLPGRLPPFLLLSTQPLQG*WAAVSG Trigger: ACCAGAGACTGCAGCCCACAACCCTTGGAGGGGTTG...GGTGGACAGCAATAGAAAAGGGGGCAGACGCCCAGGAAGTGACCTTCTCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS GCA 72 bp | GACACTCACCATCCTGCGGCGCCGCCTCGCTGCCGCTaGTGCCCCCGGACGGCTCCCGTGCTGCGCCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: DTHHPAAPPRCR*CPRTAPVLRPP Trigger: GGGAGGGCGCAGCACGGGAGCCGTCCGGGGGCAGCAGCGGCAGCGAGGCGGCGCCGCAGGATGGTGAGTGTC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS CCA 72 bp | TCCAGGAGGTGGCTCACCGAGAAGTTCTTGCGCGCCTaGGCGCAGTCGCCGGGCCCCAGCGCGGGTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: SRRWLTEKFLRA*AQSPGPSAGGG Trigger: GCCTCCACCCGCGCTGGGGCCCGGCGACTGCGCCCAGGCGCGCAAGAACTTCTCGGTGAGCCACCTCCTGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS CAA 90 bp | GCCGCCACCTCTTCCAGGTCCAGGAGGTGGCTCACCGAGAAGTTCTaGCGCGCCTGGGCGCAGTCGCCGGGCCCCAGCGCGGGTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: AATSSRSRRWLTEKF*RAWAQSPGPSAGGG Trigger: GCCTCCACCCGCGCTGGGGCCCGGCGACTGCGCCCAGGCGCGCAAGAACTTCTCGGTGAGCCACCTCCTGGACCTGGAAGAGGTGGCGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS TCA 72 bp | TCCCGCCGCCTCCTAGCCTCGCGGCCCGCCCGGCGCTaGCGTCGGGGAAACAAACTTTCCGCCCTCCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SRRLLASRPARR*RRGNKLSALPF Trigger: GAAGGGGAGGGCGGAAAGTTTGTTTCCCCGACGTCAGCGCCGGGCGGGCCGCGAGGCTAGGAGGCGGCGGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS TCA 72 bp | CGGGCTGCTCGATGGCGGCCTCCTGGCTGTAGGACTTaGGCAGCGAGGCAGAGCGGCTGGCCAGCATGGCCC | + |
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Preference number: 6 (lower is better) Translates to: RAARWRPPGCRT*AARQSGWPAWP Trigger: GGGCCATGCTGGCCAGCCGCTCTGCCTCGCTGCTCAAGTCCTACAGCCAGGAGGCCGCCATCGAGCAGCCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS CCA 72 bp | GCTGTAGGGGGACGAGGCTGTCCAGGAGAGATAATCTaGACTCAGGGCGGTGGGCCGGGGAGCCACGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: AVGGRGCPGEII*TQGGGPGSHGL Trigger: CAGCCCGTGGCTCCCCGGCCCACCGCCCTGAGTCCAGATTATCTCTCCTGGACAGCCTCGTCCCCCTACAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS GCA 72 bp | ACTGGACTTCAGTTCACCGTAGGCACCTGGCTGTGGTaGAGGCTGAACTCCTTGGCCTTGAGACGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TGLQFTVGTWLW*RLNSLALRRRL Trigger: CAGCCTCCGTCTCAAGGCCAAGGAGTTCAGCCTGCACCACAGCCAGGTGCCTACGGTGAACTGAAGTCCAGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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| CDS CCA 72 bp | CCTGGTGGGACTGGACTTCAGTTCACCGTAGGCACCTaGCTGTGGTGCAGGCTGAACTCCTTGGCCTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PGGTGLQFTVGT*LWCRLNSLALR Trigger: TCTCAAGGCCAAGGAGTTCAGCCTGCACCACAGCCAGGTGCCTACGGTGAACTGAAGTCCAGTCCCACCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372469.6 |
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