RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRRX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000116132

Ensembl transcript IDs: ENST00000239461.11, ENST00000367760.7, ENST00000476867.6, ENST00000485529.5, ENST00000495280.5, ENST00000496573.1, ENST00000497230.2, ENST00000553786.1

Found 333 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCTGTGTGACGCCTCTCACTGGTAAGGACCACGTGGCAGCCATCTaGATTGTTTATGGCTGGTATGAAAAGTTCCTATGGAGGACCCAG +
Preference number: 1 (lower is better)
Translates to: CCVTPLTGKDHVAAI*IVYGWYEKFLWRTQ
Trigger: CTGGGTCCTCCATAGGAACTTTTCATACCAGCCATAAACAATCCAGATGGCTGCCACGTGGTCCTTACCAGTGAGAGGCGTCACACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CCA 90 bp TCTTCCTCCACTGAAATCAGCCAGGGAGAACACGTAGGCTTGGCCTaGTTTCTCAGAGTACTCAGGTATATTTTCAAAGAAAGTCACTCT +
Preference number: 1 (lower is better)
Translates to: SSSTEISQGEHVGLA*FLRVLRYIFKESHS
Trigger: AGAGTGACTTTCTTTGAAAATATACCTGAGTACTCTGAGAAACCAGGCCAAGCCTACGTGTTCTCCCTGGCTGATTTCAGTGGAGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR TCA 90 bp ACCTGCCAAGTACCCTACAAATCAGCATCTTGTTTGAAGGGAGATTaGGGACACAGGCAGATAGTTCCTATGTATTCACCTGTATCTGGT +
Preference number: 1 (lower is better)
Translates to: TCQVPYKSASCLKGD*GHRQIVPMYSPVSG
Trigger: ACCAGATACAGGTGAATACATAGGAACTATCTGCCTGTGTCCTCAATCTCCCTTCAAACAAGATGCTGATTTGTAGGGTACTTGGCAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR GCA 90 bp GACAAATGGATGAATGGGGGAACTCTTCAGGAAGCAAGTAATGCGTaGTGTTCAGCAAGCCTACATGAACCATTCAGTAAGAAATGTTTT +
Preference number: 1 (lower is better)
Translates to: DKWMNGGTLQEASNA*CSASLHEPFSKKCF
Trigger: AAAACATTTCTTACTGAATGGTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTGAAGAGTTCCCCCATTCATCCATTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR CCA 90 bp AGATTGAGGACACAGGCAGATAGTTCCTATGTATTCACCTGTATCTaGTATCATGATGGTGAGGAACAGGGTTATGTCTTGACATTTGCA +
Preference number: 1 (lower is better)
Translates to: RLRTQADSSYVFTCI*YHDGEEQGYVLTFA
Trigger: TGCAAATGTCAAGACATAACCCTGTTCCTCACCATCATGATACCAGATACAGGTGAATACATAGGAACTATCTGCCTGTGTCCTCAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR GCA 90 bp GATATAACTAATGTTTCAAGATCAGTAAGGCACACCACATCTGAGTaGAATAGGGCCCAGAATAAGACTTTCCTAGATGTAGGGTCTCTA +
Preference number: 1 (lower is better)
Translates to: DITNVSRSVRHTTSE*NRAQNKTFLDVGSL
Trigger: TAGAGACCCTACATCTAGGAAAGTCTTATTCTGGGCCCTATTGCACTCAGATGTGGTGTGCCTTACTGATCTTGAAACATTAGTTATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CCA 90 bp AGCCATTCTCTTCAAGCTCCAAACCTCCAAAGTTCACCAGTTACTTaGATTATACTCATTTCACTTAGAATGTTTCAGTCTGTTGGGATG +
Preference number: 1 (lower is better)
Translates to: SHSLQAPNLQSSPVT*IILISLRMFQSVGM
Trigger: CATCCCAACAGACTGAAACATTCTAAGTGAAATGAGTATAATCCAAGTAACTGGTGAACTTTGGAGGTTTGGAGCTTGAAGAGAATGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR CCA 90 bp GTACTCAGGTATATTTTCAAAGAAAGTCACTCTAGACTAATCCAATaGGTTAGGAATTTGTGTCTCAGCTTCCCTTCTGGCAGCCTATAT +
Preference number: 1 (lower is better)
Translates to: VLRYIFKESHSRLIQ*VRNLCLSFPSGSLY
Trigger: ATATAGGCTGCCAGAAGGGAAGCTGAGACACAAATTCCTAACCCATTGGATTAGTCTAGAGTGACTTTCTTTGAAAATATACCTGAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR TCA 90 bp CAGGCTTTGAACCACACCCATTTTCCAAGCCATTTAGCGTGTTCATaGACACACCAAATTTCTCTTATACCAATGTTTATAAGAGAAATA +
Preference number: 1 (lower is better)
Translates to: QALNHTHFPSHLACS*THQISLIPMFIREI
Trigger: TATTTCTCTTATAAACATTGGTATAAGAGAAATTTGGTGTGTTCATGAACACGCTAAATGGCTTGGAAAATGGGTGTGGTTCAAAGCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CCA 90 bp GAGGAACAGGGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACAGAAACAAGTGGTGGTaGTATCCCAGAGGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: EEQGYVLTFAALRTSTDNRNKWW*YPRGRR
Trigger: CCTCCTCCCTCTGGGATACCACCACCACTTGTTTCT...GTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACCCTGTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR CCA 90 bp GAGGAACAGGGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACCACAGAAACAAGTGGTaGTGGTATCCCAGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: EEQGYVLTFAALRTSTDNHRNKW*WYPRGR
Trigger: CCTCCCTCTGGGATACCACCACCACTTGTTTCTGTG...GTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACCCTGTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR GCA 90 bp ACCCAGACAGAAAAAGGGGCAATACTTCCTGGTTGTGACCAAATTCAAACCAGATGCCCCTCTCACTTCTaGCCCAAACCCTGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: TQTEKGAILPGCDQIQTRCPSHF*PKPCCW
Trigger: CCAGCAGCAGGGTTTGGGGCAGAAGTGAGAGGGGCA...TCTGGTTTGAATTTGGTCACAACCAGGAAGTATTGCCCCTTTTTCTGTCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CCA 90 bp GAGGAACAGGGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACACACACAGAAACAAGTaGTGGTGGTATCCCAGAGGG +
Preference number: 2 (lower is better)
Translates to: EEQGYVLTFAALRTSTDNTHRNK*WWYPRG
Trigger: CCCTCTGGGATACCACCACCACTTGTTTCTGTGTGT...GTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACCCTGTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR GCA 90 bp GGGGAACTCTTCAGGAAGCAAGTAATGCGTGCTGTTCAGCAAGCCTACATGAACATTTTGCTCCTCTCCTaGTTTTCTCTGCCATGGTCC +
Preference number: 2 (lower is better)
Translates to: GELFRKQVMRAVQQAYMNILLLS*FSLPWS
Trigger: GGACCATGGCAGAGAAAAGCAGGAGAGGAGCAAAAT...GTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTGAAGAGTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR CCA 90 bp GGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACTGGCTTAAGGGCACGAAAGAGATGTaGGCATGCCTTTTAGAACTC +
Preference number: 2 (lower is better)
Translates to: GYVLTFAALRTSTDNWLKGTKEM*ACLLEL
Trigger: GAGTTCTAAAAGGCATGCCCACATCTCTTTCGTGCC...CTTAAGCCAGTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR CAA 90 bp TTCACCTGTATCTGGTATCATGATGGTGAGGAACAGGGTTATGTCTaGACATTTGCAGCCCTGAGGACCTCCACTGACAACTGGCTTAAG +
Preference number: 2 (lower is better)
Translates to: FTCIWYHDGEEQGYV*TFAALRTSTDNWLK
Trigger: CTTAAGCCAGTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACCCTGTTCCTCACCATCATGATACCAGATACAGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR TCA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATTGCTGTTGGCCATGTTaGTGCCCTGTGCAGGGCTAT +
Preference number: 2 (lower is better)
Translates to: PPADEEITEQDRCLMVFDCCWPC*CPVQGY
Trigger: ATAGCCCTGCACAGGGCATCAACATGGCCAACAGCA...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367760.7
3UTR-3UTR CCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAACCTTCAGTCTCAGGTTaGCAATGCTGTTGGCCATGT +
Preference number: 2 (lower is better)
Translates to: QNKHTQKQVVVVSQREEEPSVSG*QCCWPC
Trigger: ACATGGCCAACAGCATTGCCAACCTGAGACTGAAGG...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367760.7
3UTR-3UTR TCA 90 bp GGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACTGGCTTAAGTGGTGGCTGTTAGATTaGAATAACATCACCATTAGC +
Preference number: 2 (lower is better)
Translates to: GYVLTFAALRTSTDNWLKWWLLD*NNITIS
Trigger: GCTAATGGTGATGTTATTTCAATCTAACAGCCACCA...CTTAAGCCAGTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR TCA 90 bp TTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACAAGTTACGTCCCAACATGACCGACCGCTaGGAAACATGTGGAAGTGGA +
Preference number: 2 (lower is better)
Translates to: LLQSLPLALYLEFYKLRPNMTDR*ETCGSG
Trigger: TCCACTTCCACATGTTTCTCAGCGGTCGGTCATGTT...GGGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR TCA 90 bp TCCAATGGGTTAGGAATTTGTGTCTCAGCTTCCCTTCTGGCAGCCTATATTTTCCTTTGCAAGAGTTCCTaGGTCCAAGAGGAGATTGGT +
Preference number: 2 (lower is better)
Translates to: SNGLGICVSASLLAAYIFLCKSS*VQEEIG
Trigger: ACCAATCTCCTCTTGGACTCAGGAACTCTTGCAAAG...GAAAATATAGGCTGCCAGAAGGGAAGCTGAGACACAAATTCCTAACCCATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CCA 90 bp CATGATAGATCAGATGTATCAGCATTTCACCAGAGCTCAGGCTCCAAACTCAAGCGCAGCCAATTACATTaGATCAGACAGTCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: HDRSDVSAFHQSSGSKLKRSQLH*IRQSSE
Trigger: CTCACTGGACTGTCTGATCCAATGTAATTGGCTGCG...CTTGAGTTTGGAGCCTGAGCTCTGGTGAAATGCTGATACATCTGATCTATCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR CCA 90 bp GAGGAACAGGGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACTATCATTTGGGTTTATaGGTTCAGGCTTTGCTGTTT +
Preference number: 2 (lower is better)
Translates to: EEQGYVLTFAALRTSTDNYHLGL*VQALLF
Trigger: AAACAGCAAAGCCTGAACCCATAAACCCAAATGATA...GTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACCCTGTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR TCA 90 bp AGACGCAGCCAATTACATTGGATCAGACAGTCCAGTGAGCAGATGTTGTGCACACAAAGATGGAGACAATaGGAAAGGGAATTATGTCTG +
Preference number: 2 (lower is better)
Translates to: RRSQLHWIRQSSEQMLCTQRWRQ*ERELCL
Trigger: CAGACATAATTCCCTTTCTCATTGTCTCCATCTTTG...TGTGCACAACATCTGCTCACTGGACTGTCTGATCCAATGTAATTGGCTGCGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR TCA 90 bp ACTTTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATCCAAGAGGAGATTGGTaGGATAGCCTGCCCCTCTCA +
Preference number: 2 (lower is better)
Translates to: TFLDVGSLCAKTKRIQANPRGDW*DSLPLS
Trigger: TGAGAGGGGCAGGCTATCTCACCAATCTCCTCTTGG...ATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CCA 90 bp GGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACTGGCTTAAGGATAATACATGCTTATaGTATTGGTTCACCAGCAGT +
Preference number: 2 (lower is better)
Translates to: GYVLTFAALRTSTDNWLKDNTCL*YWFTSS
Trigger: ACTGCTGGTGAACCAATACCATAAGCATGTATTATC...CTTAAGCCAGTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR CCA 90 bp TTCAAAGCCAGTTTTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACCGCTGAGAAACATGTaGAAGTGGAGCAAGGGAGAG +
Preference number: 2 (lower is better)
Translates to: FKASFTAKFAFGPILGVLPLRNM*KWSKGE
Trigger: CTCTCCCTTGCTCCACTTCCACATGTTTCTCAGCGG...TAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAAACTGGCTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CAA 90 bp AATAGTTCTTCCTCCACTGAAATCAGCCAGGGAGAACACGTAGGCTaGGCCTGGTTTCTCAGAGTACTCAGGTATATTTTCAAAGAAAGT +
Preference number: 2 (lower is better)
Translates to: NSSSSTEISQGEHVG*AWFLRVLRYIFKES
Trigger: ACTTTCTTTGAAAATATACCTGAGTACTCTGAGAAACCAGGCCAAGCCTACGTGTTCTCCCTGGCTGATTTCAGTGGAGGAAGAACTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CAA 90 bp AAGGGGCAATACTTCCTGGTTGTGACCAAATTCAAACCAGAGATCTaGAAGCATCAGGCTTTGAACCACACCCATTTTCCAAGCCATTTA +
Preference number: 2 (lower is better)
Translates to: KGQYFLVVTKFKPEI*KHQALNHTHFPSHL
Trigger: TAAATGGCTTGGAAAATGGGTGTGGTTCAAAGCCTGATGCTTCAAGATCTCTGGTTTGAATTTGGTCACAACCAGGAAGTATTGCCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR GCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTATTTTGCTCCTCTCCTaGTTTTCTCTGCCATGGTCC +
Preference number: 2 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPILLLS*FSLPWS
Trigger: GGACCATGGCAGAGAAAAGCAGGAGAGGAGCAAAAT...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
3UTR-3UTR GCA 90 bp TTGAGGACACAGGCAGATAGTTCCTATGTATTCACCTGTATCTGGTATCATGATTTATGTCTTGACATTTaGAGCCCTGAGGACCTCCAC +
Preference number: 2 (lower is better)
Translates to: LRTQADSSYVFTCIWYHDLCLDI*SPEDLH
Trigger: GTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAA...ATCATGATACCAGATACAGGTGAATACATAGGAACTATCTGCCTGTGTCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR GCA 90 bp TTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATTTTATTGGTGAGATAGCCTaGCCCTCTCACTTCTGCCCC +
Preference number: 2 (lower is better)
Translates to: FLDVGSLCAKTKRIQANFIGEIA*PSHFCP
Trigger: GGGGCAGAAGTGAGAGGGGCAGGCTATCTCACCAAT...AAAATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAATTGACTGTTGGCACCTaGTTCCTCTGTAAACTATAT +
Preference number: 2 (lower is better)
Translates to: QNKHTQKQVVVVSQREEELTVGT*FLCKLY
Trigger: ATATAGTTTACAGAGGAACCAGGTGCCAACAGTCAA...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367760.7
3UTR-3UTR CCA 90 bp ACCCAGACAGAAAAAGGGGCAATACTTCCTGGTTGTGACCAAATTCAAACCAGATTGCAAGAGGAACACTaGGCACAGCTTAATGATCTT +
Preference number: 2 (lower is better)
Translates to: TQTEKGAILPGCDQIQTRLQEEH*AQLNDL
Trigger: AAGATCATTAAGCTGTGCCCAGTGTTCCTCTTGCAA...TCTGGTTTGAATTTGGTCACAACCAGGAAGTATTGCCCCTTTTTCTGTCTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR TCA 90 bp TCCAATGGGTTAGGAATTTGTGTCTCAGCTTCCCTTCTGGCAGCCTATATTTTCCAAATACACACAAACTaGTCCCCAGAGAAAACTTCA +
Preference number: 2 (lower is better)
Translates to: SNGLGICVSASLLAAYIFQIHTN*SPEKTS
Trigger: TGAAGTTTTCTCTGGGGATCAGTTTGTGTGTATTTG...GAAAATATAGGCTGCCAGAAGGGAAGCTGAGACACAAATTCCTAACCCATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAATGCTTTTCTCTGCCATaGTCCCAATATTTTAGTTCT +
Preference number: 2 (lower is better)
Translates to: QNKHTQKQVVVVSQREEECFSLP*SQYFSS
Trigger: AGAACTAAAATATTGGGACCATGGCAGAGAAAAGCA...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
3UTR-3UTR GCA 90 bp TTCAAAGCCAGTTTTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTAGAAATGTCGGTGAGCTaGACAAGCAGCTTGAAACAT +
Preference number: 2 (lower is better)
Translates to: FKASFTAKFAFGPILGVLEMSVS*TSSLKH
Trigger: ATGTTTCAAGCTGCTTGTGCAGCTCACCGACATTTC...TAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAAACTGGCTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CCA 90 bp CCAGCACAGATTCTTCAGAAAGACTTTGGCTTTTCGAAAGCTCCTAGAGCTTCTTGCTTTTCTCTGCCATaGTCCCAATATTTTAGTTCT +
Preference number: 2 (lower is better)
Translates to: PAQILQKDFGFSKAPRASCFSLP*SQYFSS
Trigger: AGAACTAAAATATTGGGACCATGGCAGAGAAAAGCA...AGAAGCTCTAGGAGCTTTCGAAAAGCCAAAGTCTTTCTGAAGAATCTGTGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR CCA 90 bp TTGAGGACACAGGCAGATAGTTCCTATGTATTCACCTGTATCTGGTATCATGATCTAGCTGAAGAAGCCTaGAGTACATTAAGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: LRTQADSSYVFTCIWYHDLAEEA*STLSKA
Trigger: TGCTTTGCTTAATGTACTCCAGGCTTCTTCAGCTAG...ATCATGATACCAGATACAGGTGAATACATAGGAACTATCTGCCTGTGTCCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR CCA 90 bp ATTATACTCATTTCACTTAGAATGTTTCAGTCTGTTGGGATGTACAGTTCCTTCGTCCCTTTCCTCCCATaGCTACAAAGTGCTGGACAT +
Preference number: 2 (lower is better)
Translates to: IILISLRMFQSVGMYSSFVPFLP*LQSAGH
Trigger: ATGTCCAGCACTTTGTAGCCATGGGAGGAAAGGGAC...GAAGGAACTGTACATCCCAACAGACTGAAACATTCTAAGTGAAATGAGTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR CCA 90 bp ACCCAGACAGAAAAAGGGGCAATACTTCCTGGTTGTGACCAAATTCAAACCAGATCTAGACTAATCCAATaGGTTAGGAATTTGTGTCTC +
Preference number: 2 (lower is better)
Translates to: TQTEKGAILPGCDQIQTRSRLIQ*VRNLCL
Trigger: GAGACACAAATTCCTAACCCATTGGATTAGTCTAGA...TCTGGTTTGAATTTGGTCACAACCAGGAAGTATTGCCCCTTTTTCTGTCTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CAA 90 bp ATTTTCAAAGAAAGTCACTCTAGACTAATCCAATGGGTTAGGAATTaGTGTCTCAGCTTCCCTTCTGGCAGCCTATATTTTCTGAACAGC +
Preference number: 2 (lower is better)
Translates to: IFKESHSRLIQWVRN*CLSFPSGSLYFLNS
Trigger: GCTGTTCAGAAAATATAGGCTGCCAGAAGGGAAGCTGAGACACAAATTCCTAACCCATTGGATTAGTCTAGAGTGACTTTCTTTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR TCA 90 bp AATGTTTCAGTCTGTTGGGATGTACAGTTCCTTCAAAACTTGATAATCCACAGCGGAAAAACCTTACCATaGCCAACAAAGATGGAGACA +
Preference number: 2 (lower is better)
Translates to: NVSVCWDVQFLQNLIIHSGKTLP*PTKMET
Trigger: TGTCTCCATCTTTGTTGGTCATGGTAAGGTTTTTCC...GCTGTGGATTATCAAGTTTTGAAGGAACTGTACATCCCAACAGACTGAAACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR TCA 90 bp TTGAGGACACAGGCAGATAGTTCCTATGTATTCACCTGTATCTGGTATCATGATACCATTAGCTCAATCTaGTATGCCAAGGGAAATACA +
Preference number: 2 (lower is better)
Translates to: LRTQADSSYVFTCIWYHDTISSI*YAKGNT
Trigger: TGTATTTCCCTTGGCATATCAGATTGAGCTAATGGT...ATCATGATACCAGATACAGGTGAATACATAGGAACTATCTGCCTGTGTCCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR GCA 90 bp ATGGGACCTGTTCTCAAACAGCTGCCCTATCAATTATTCTGTGGCTTTAATGAAAAAGAGATGTGGGCATaGCTTTTAGAACTCACTCTT +
Preference number: 2 (lower is better)
Translates to: MGPVLKQLPYQLFCGFNEKEMWA*LLELTL
Trigger: AAGAGTGAGTTCTAAAAGGCATGCCCACATCTCTTT...TTCATTAAAGCCACAGAATAATTGATAGGGCAGCTGTTTGAGAACAGGTCCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR GCA 90 bp TTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATTTTCAAAGCCAGTTTTACTaGAAAGTTTGCCTTTGGCCC +
Preference number: 2 (lower is better)
Translates to: FLDVGSLCAKTKRIQANFQSQFY*KVCLWP
Trigger: GGGCCAAAGGCAAACTTTGCAGTAAAACTGGCTTTG...AAAATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CCA 90 bp AATCTGATATGCCAAGGGAAATACAAATGTGTGCTAAAAGTGCATCTTAAACCCTTCTATAAAGAGAACTaGGAAGAGGACAGGGTAAGG +
Preference number: 2 (lower is better)
Translates to: NLICQGKYKCVLKVHLKPFYKEN*EEDRVR
Trigger: CCTTACCCTGTCCTCTTCCCAGTTCTCTTTATAGAA...GGGTTTAAGATGCACTTTTAGCACACATTTGTATTTCCCTTGGCATATCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR CCA 90 bp ACTTTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATCAGCTTATAATCTCCTaGGAAAATGTGGGGATGTCA +
Preference number: 2 (lower is better)
Translates to: TFLDVGSLCAKTKRIQANQLIIS*ENVGMS
Trigger: TGACATCCCCACATTTTCCCAGGAGATTATAAGCTG...ATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CCA 90 bp GATATAACTAATGTTTCAAGATCAGTAAGGCACACCACATCTGAGTGCAATAGGTGCAAAGTTTGCCTTTaGCCCTATACTTGGAGTTTT +
Preference number: 2 (lower is better)
Translates to: DITNVSRSVRHTTSECNRCKVCL*PYTWSF
Trigger: AAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCA...CCTATTGCACTCAGATGTGGTGTGCCTTACTGATCTTGAAACATTAGTTATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CAA 90 bp AATTCAAAGCCAGTTTTACTGCAAAGTTTGCCTTTGGCCCTATACTaGGAGTTTTACAAGTTACGTCCCTACATTTGCATAATACAACGA +
Preference number: 2 (lower is better)
Translates to: NSKPVLLQSLPLALY*EFYKLRPYICIIQR
Trigger: TCGTTGTATTATGCAAATGTAGGGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAAACTGGCTTTGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR GCA 90 bp ATTATACTCATTTCACTTAGAATGTTTCAGTCTGTTGGGATGTACAGTTCCTTCCTGTTCTCAAACAGCTaGCCTATCAATTATTCTGTG +
Preference number: 2 (lower is better)
Translates to: IILISLRMFQSVGMYSSFLFSNS*PINYSV
Trigger: CACAGAATAATTGATAGGGCAGCTGTTTGAGAACAG...GAAGGAACTGTACATCCCAACAGACTGAAACATTCTAAGTGAAATGAGTATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR CAA 90 bp CAGTTACTTGGATTATACTCATTTCACTTAGAATGTTTCAGTCTGTaGGGATGTACAGTTCCTTCAAAACTTGATAATCCACAGCAACTA +
Preference number: 2 (lower is better)
Translates to: QLLGLYSFHLECFSL*GCTVPSKLDNPQQL
Trigger: TAGTTGCTGTGGATTATCAAGTTTTGAAGGAACTGTACATCCCAACAGACTGAAACATTCTAAGTGAAATGAGTATAATCCAAGTAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR CAA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAAATGCTGTTGGCCATGTaGATGCCCTGTGCAGGGCTA +
Preference number: 3 (lower is better)
Translates to: QNKHTQKQVVVVSQREEEMLLAM*MPCAGL
Trigger: TAGCCCTGCACAGGGCATCAACATGGCCAACAGCAT...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367760.7
3UTR-3UTR CAA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAAGCCTTCAGTCTCAGGTaGGCAATGCTGTTGGCCATG +
Preference number: 3 (lower is better)
Translates to: QNKHTQKQVVVVSQREEEAFSLR*AMLLAM
Trigger: CATGGCCAACAGCATTGCCAACCTGAGACTGAAGGC...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367760.7
3UTR TCA 72 bp AGAAATGTCGGTGAGCTGCACAAGCAGCTTGAAACATaGCCGACCGCTGAGAAACATGTGGAAGTGGAGCAA +
Preference number: 3 (lower is better)
Translates to: RNVGELHKQLET*PTAEKHVEVEQ
Trigger: TTGCTCCACTTCCACATGTTTCTCAGCGGTCGGTCATGTTTCAAGCTGCTTGTGCAGCTCACCGACATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CCA 72 bp ACGCCTCTCACTGGTAAGGACCACGTGGCAGCCATCTaGATTGTTTATGGCTGGTATGAAAAGTTCCTATGG +
Preference number: 3 (lower is better)
Translates to: TPLTGKDHVAAI*IVYGWYEKFLW
Trigger: CCATAGGAACTTTTCATACCAGCCATAAACAATCCAGATGGCTGCCACGTGGTCCTTACCAGTGAGAGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CCA 72 bp AAGGACCACGTGGCAGCCATCTGGATTGTTTATGGCTaGTATGAAAAGTTCCTATGGAGGACCCAGACAGAA +
Preference number: 3 (lower is better)
Translates to: KDHVAAIWIVYG*YEKFLWRTQTE
Trigger: TTCTGTCTGGGTCCTCCATAGGAACTTTTCATACCAGCCATAAACAATCCAGATGGCTGCCACGTGGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CAA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTCCCTGTGCAGGGCTATaGTTGGCACATGTGGCAGAA +
Preference number: 3 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPPCAGL*LAHVAE
Trigger: TTCTGCCACATGTGCCAACAATAGCCCTGCACAGGG...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367760.7
3UTR TCA 72 bp TCATACAATCATGGGGGTGGGTGGGCTGAACCTAGCTaGAGAAGCCTGGAGTACATTAAGCAAAGCATGAAT +
Preference number: 3 (lower is better)
Translates to: SYNHGGGWAEPS*RSLEYIKQSMN
Trigger: ATTCATGCTTTGCTTAATGTACTCCAGGCTTCTTCAGCTAGGTTCAGCCCACCCACCCCCATGATTGTATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR CAA 90 bp AATGAATTTTTGAATAGTTCTTCCTCCACTGAAATCAGCCAGGGAGAACACGTAAGCTGCACAAGCAGCTaGAAACATGACCGACCGCTG +
Preference number: 3 (lower is better)
Translates to: NEFLNSSSSTEISQGEHVSCTSS*KHDRPL
Trigger: CAGCGGTCGGTCATGTTTCAAGCTGCTTGTGCAGCT...TACGTGTTCTCCCTGGCTGATTTCAGTGGAGGAAGAACTATTCAAAAATTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR GCA 72 bp ATGAATGGGGGAACTCTTCAGGAAGCAAGTAATGCGTaGTGTTCAGCAAGCCTACATGAACCATTCAGTAAG +
Preference number: 3 (lower is better)
Translates to: MNGGTLQEASNA*CSASLHEPFSK
Trigger: CTTACTGAATGGTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTGAAGAGTTCCCCCATTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR CAA 90 bp GATATAACTAATGTTTCAAGATCAGTAAGGCACACCACATCTGAGTGCAATAGGGGAGAACACGTAGGCTaGGCCTGGTTTCTCAGAGTA +
Preference number: 3 (lower is better)
Translates to: DITNVSRSVRHTTSECNRGEHVG*AWFLRV
Trigger: TACTCTGAGAAACCAGGCCAAGCCTACGTGTTCTCC...CCTATTGCACTCAGATGTGGTGTGCCTTACTGATCTTGAAACATTAGTTATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CCA 72 bp ACTGAAATCAGCCAGGGAGAACACGTAGGCTTGGCCTaGTTTCTCAGAGTACTCAGGTATATTTTCAAAGAA +
Preference number: 3 (lower is better)
Translates to: TEISQGEHVGLA*FLRVLRYIFKE
Trigger: TTCTTTGAAAATATACCTGAGTACTCTGAGAAACCAGGCCAAGCCTACGTGTTCTCCCTGGCTGATTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CAA 90 bp TCCAATGGGTTAGGAATTTGTGTCTCAGCTTCCCTTCTGGCAGCCTATATTTTCTCATCTTTGAAACCTTaGCAAGAGTTCCTGAGTCCA +
Preference number: 3 (lower is better)
Translates to: SNGLGICVSASLLAAYIFSSLKP*QEFLSP
Trigger: TGGACTCAGGAACTCTTGCAAAGGTTTCAAAGATGA...GAAAATATAGGCTGCCAGAAGGGAAGCTGAGACACAAATTCCTAACCCATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CCA 72 bp ACACAGGCAGATAGTTCCTATGTATTCACCTGTATCTaGTATCATGATGGTGAGGAACAGGGTTATGTCTTG +
Preference number: 3 (lower is better)
Translates to: TQADSSYVFTCI*YHDGEEQGYVL
Trigger: CAAGACATAACCCTGTTCCTCACCATCATGATACCAGATACAGGTGAATACATAGGAACTATCTGCCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR CAA 90 bp TTGAGGACACAGGCAGATAGTTCCTATGTATTCACCTGTATCTGGTATCATGATGCAGTGAATGTTTCTTaGGCTGACCAGCACTTGTTA +
Preference number: 3 (lower is better)
Translates to: LRTQADSSYVFTCIWYHDAVNVS*ADQHLL
Trigger: TAACAAGTGCTGGTCAGCCAAAGAAACATTCACTGC...ATCATGATACCAGATACAGGTGAATACATAGGAACTATCTGCCTGTGTCCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR CAA 90 bp ACCCAGACAGAAAAAGGGGCAATACTTCCTGGTTGTGACCAAATTCAAACCAGAGATTCTTCCTCATCTTaGAAACCTTTGCAAGAGTTC +
Preference number: 3 (lower is better)
Translates to: TQTEKGAILPGCDQIQTRDSSSS*KPLQEF
Trigger: GAACTCTTGCAAAGGTTTCAAAGATGAGGAAGAATC...TCTGGTTTGAATTTGGTCACAACCAGGAAGTATTGCCCCTTTTTCTGTCTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CAA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTTGTAAACTATATTCCTaGGCCTTCAGTCTCAGGTTG +
Preference number: 3 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPCKLYS*AFSLRL
Trigger: CAACCTGAGACTGAAGGCCAAGGAATATAGTTTACA...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367760.7
3UTR-3UTR CAA 90 bp TTCAAAGCCAGTTTTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTAGGGGATGTCAGCAAGTaGAATGTCTCTGAAGAGATT +
Preference number: 3 (lower is better)
Translates to: FKASFTAKFAFGPILGVLGDVSK*NVSEEI
Trigger: AATCTCTTCAGAGACATTCAACTTGCTGACATCCCC...TAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAAACTGGCTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CAA 90 bp AATGAATTTTTGAATAGTTCTTCCTCCACTGAAATCAGCCAGGGAGAACACGTATTTGTTCCAGAATTGTaGCAAGAGGAACACTGGGCA +
Preference number: 3 (lower is better)
Translates to: NEFLNSSSSTEISQGEHVFVPEL*QEEHWA
Trigger: TGCCCAGTGTTCCTCTTGCAACAATTCTGGAACAAA...TACGTGTTCTCCCTGGCTGATTTCAGTGGAGGAAGAACTATTCAAAAATTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CAA 90 bp GATATAACTAATGTTTCAAGATCAGTAAGGCACACCACATCTGAGTGCAATAGGCAATGGGTTAGGAATTaGTGTCTCAGCTTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: DITNVSRSVRHTTSECNRQWVRN*CLSFPS
Trigger: AGAAGGGAAGCTGAGACACAAATTCCTAACCCATTG...CCTATTGCACTCAGATGTGGTGTGCCTTACTGATCTTGAAACATTAGTTATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CAA 90 bp ATGGGACCTGTTCTCAAACAGCTGCCCTATCAATTATTCTGTGGCTTTAATGAAGTGAGGGTGTGTAATTaGCTTTTTGTATTGTTTGGG +
Preference number: 3 (lower is better)
Translates to: MGPVLKQLPYQLFCGFNEVRVCN*LFVLFG
Trigger: CCCAAACAATACAAAAAGCAAATTACACACCCTCAC...TTCATTAAAGCCACAGAATAATTGATAGGGCAGCTGTTTGAGAACAGGTCCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR CCA 72 bp TTAACATTGTACACTTTTATAGTCCCTTTCCTCCCATaGCTACAAAGTGCTGGACATACAGAGAATACAGGA +
Preference number: 3 (lower is better)
Translates to: LTLYTFIVPFLP*LQSAGHTENTG
Trigger: TCCTGTATTCTCTGTATGTCCAGCACTTTGTAGCCATGGGAGGAAAGGGACTATAAAAGTGTACAATGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR GCA 72 bp ATTTGGAAACAGGGTAAAGTTTTGTTCCAGAATTGTTaGAAGAGGAACACTGGGCACAGCTTAATGATCTTT +
Preference number: 3 (lower is better)
Translates to: IWKQGKVLFQNC*KRNTGHSLMIF
Trigger: AAAGATCATTAAGCTGTGCCCAGTGTTCCTCTTGCAACAATTCTGGAACAAAACTTTACCCTGTTTCCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CCA 72 bp TTAATTCAAAGCCAGTTTTACTGCAAAGTTTGCCTTTaGCCCTATACTTGGAGTTTTACAAGTTACGTCCCT +
Preference number: 3 (lower is better)
Translates to: LIQSQFYCKVCL*PYTWSFTSYVP
Trigger: AGGGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAAACTGGCTTTGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CCA 72 bp TATATTTTCAAAGAAAGTCACTCTAGACTAATCCAATaGGTTAGGAATTTGTGTCTCAGCTTCCCTTCTGGC +
Preference number: 3 (lower is better)
Translates to: YIFKESHSRLIQ*VRNLCLSFPSG
Trigger: GCCAGAAGGGAAGCTGAGACACAAATTCCTAACCCATTGGATTAGTCTAGAGTGACTTTCTTTGAAAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR-3UTR CAA 90 bp AATCTGATATGCCAAGGGAAATACAAATGTGTGCTAAAAGTGCATCTTAAACCCTTCTTCAGAAAGACTTaGGCTTTTCGAAAGCTCCTA +
Preference number: 3 (lower is better)
Translates to: NLICQGKYKCVLKVHLKPFFRKT*AFRKLL
Trigger: TAGGAGCTTTCGAAAAGCCAAAGTCTTTCTGAAGAA...GGGTTTAAGATGCACTTTTAGCACACATTTGTATTTCCCTTGGCATATCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR CCA 72 bp TTTGGGTTTATGGGTTCAGGCTTTGCTGTTTGCCACTaGAAATGGATGTCTGAATCAAAATTTCAAATGATT +
Preference number: 3 (lower is better)
Translates to: FGFMGSGFAVCH*KWMSESKFQMI
Trigger: AATCATTTGAAATTTTGATTCAGACATCCATTTCCAGTGGCAAACAGCAAAGCCTGAACCCATAAACCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR-3UTR CAA 90 bp AATCTGATATGCCAAGGGAAATACAAATGTGTGCTAAAAGTGCATCTTAAACCCACAAAGTTGGCATGTTaGACCAAAATTGATCCAAAG +
Preference number: 3 (lower is better)
Translates to: NLICQGKYKCVLKVHLKPTKLAC*TKIDPK
Trigger: CTTTGGATCAATTTTGGTCAAACATGCCAACTTTGT...GGGTTTAAGATGCACTTTTAGCACACATTTGTATTTCCCTTGGCATATCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR TCA 72 bp AACCACACCCATTTTCCAAGCCATTTAGCGTGTTCATaGACACACCAAATTTCTCTTATACCAATGTTTATA +
Preference number: 3 (lower is better)
Translates to: NHTHFPSHLACS*THQISLIPMFI
Trigger: TATAAACATTGGTATAAGAGAAATTTGGTGTGTTCATGAACACGCTAAATGGCTTGGAAAATGGGTGTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR GCA 72 bp CATGTATATTTCTTGATCAAGTGCTTAGATAATACATaGTTATGGTATTGGTTCACCAGCAGTGAATGTTTC +
Preference number: 3 (lower is better)
Translates to: HVYFLIKCLDNT*LWYWFTSSECF
Trigger: GAAACATTCACTGCTGGTGAACCAATACCATAAGCATGTATTATCTAAGCACTTGATCAAGAAATATACATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp TGCACAAGCAGCTTGAAACATGACCGACCGCTGAGAAACATGTGGAAGTGGAGCCCGCCCAGCGCCGGTTaGCGCTCCAGAACGTGCCCG +
Preference number: 4 (lower is better)
Translates to: CTSSLKHDRPLRNMWKWSPPSAG*RSRTCP
Trigger: CGGGCACGTTCTGGAGCGGCAACCGGCGCTGGGCGG...GCTCCACTTCCACATGTTTCTCAGCGGTCGGTCATGTTTCAAGCTGCTTGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAACCGCCCAGCGCCGGTTaGCGCTCCAGAACGTGCCCG +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEEPPSAG*RSRTCP
Trigger: CGGGCACGTTCTGGAGCGGCAACCGGCGCTGGGCGG...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR TCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAATGTCGCTGCCGCTGGTaGGTCCCGGCGACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEECRCRW*VPATPA
Trigger: TGCTGGAGTCGCCGGGACTCACCAGCGGCAGCGACA...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR GCA 90 bp CAGGAAGCAAGTAATGCGTGCTGTTCAGCAAGCCTACATGAACCATTCAGTAAGGCAGGGTGTCGAGGTTaGCCGGGCTGTCCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: QEASNACCSASLHEPFSKAGCRG*PGCPSG
Trigger: GCCGCTTGGACAGCCCGGGCAACCTCGACACCCTGC...CTTACTGAATGGTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAAGCAGGGTGTCGAGGTTaGCCGGGCTGTCCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEEAGCRG*PGCPSG
Trigger: GCCGCTTGGACAGCCCGGGCAACCTCGACACCCTGC...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR GCA 90 bp GTTGATGCCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATAGCTGGTCATTGTCCTaGTGCGGGGTGTCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: VDALCRAIVGTCGRISSHSWSLS*CGVSLP
Trigger: CGGCAGCGACACCCCGCAGCAGGACAATGACCAGCT...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGCATCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR TCA 90 bp CATGATAGATCAGATGTATCAGCATTTCACCAGAGCTCAGGCTCCAAACTCAAGGCACTCTCGCCTCGGTaGGGTTCACCCGGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: HDRSDVSAFHQSSGSKLKALSPR*GSPGGQ
Trigger: TTGCCCGCCGGGTGAACCTCACCGAGGCGAGAGTGC...CTTGAGTTTGGAGCCTGAGCTCTGGTGAAATGCTGATACATCTGATCTATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp AATGTCTCTGAAGAGATTAACCCAGTAAGAAATGTCGGTGAGCTGCACAAGCAGGCACTCTCGCCTCGGTaGGGTTCACCCGGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: NVSEEINPVRNVGELHKQALSPR*GSPGGQ
Trigger: TTGCCCGCCGGGTGAACCTCACCGAGGCGAGAGTGC...CTGCTTGTGCAGCTCACCGACATTTCTTACTGGGTTAATCTCTTCAGAGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTCCGCCCAGCGCCGGTTaGCGCTCCAGAACGTGCCCG +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPPPSAG*RSRTCP
Trigger: CGGGCACGTTCTGGAGCGGCAACCGGCGCTGGGCGG...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CCA 90 bp GGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACTGGCTTAAGGAACGTGCCCGTAGCTaGAGGTCATGGTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GYVLTFAALRTSTDNWLKERARS*RSWSPP
Trigger: TGGGGGAGACCATGACCTCCAGCTACGGGCACGTTC...CTTAAGCCAGTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp GAGGAACAGGGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACTGCTGTTGGCCATGTTaGTGCCCTGTGCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: EEQGYVLTFAALRTSTDNCCWPC*CPVQGY
Trigger: ATAGCCCTGCACAGGGCATCAACATGGCCAACAGCA...GTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACCCTGTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp GTTGATGCCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATCATTGGTTGATTTCCTaGGGCCAAGTCCGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: VDALCRAIVGTCGRISSHHWLIS*GQVRRG
Trigger: ACCGCGCCGGACTTGGCCTCAGGAAATCAACCAATG...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGCATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR GCA 90 bp ACCCAGACAGAAAAAGGGGCAATACTTCCTGGTTGTGACCAAATTCAAACCAGAGTTCTCATCCGCCTGTaGCGCCACCATGTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: TQTEKGAILPGCDQIQTRVLIRL*RHHVPG
Trigger: GCCGGGGACATGGTGGCGGCACAGGCGGATGAGAAC...TCTGGTTTGAATTTGGTCACAACCAGGAAGTATTGCCCCTTTTTCTGTCTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp CAGGAAGCAAGTAATGCGTGCTGTTCAGCAAGCCTACATGAACCATTCAGTAAGAGCTGGTCATTGTCCTaGTGCGGGGTGTCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QEASNACCSASLHEPFSKSWSLS*CGVSLP
Trigger: CGGCAGCGACACCCCGCAGCAGGACAATGACCAGCT...CTTACTGAATGGTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTGCACTCTCGCCTCGGTaGGGTTCACCCGGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPALSPR*GSPGGQ
Trigger: TTGCCCGCCGGGTGAACCTCACCGAGGCGAGAGTGC...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR TCA 90 bp GTTGATGCCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATTGCTGTTGGCCATGTTaGTGCCCTGTGCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: VDALCRAIVGTCGRISSHCCWPC*CPVQGY
Trigger: ATAGCCCTGCACAGGGCATCAACATGGCCAACAGCA...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGCATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR GCA 90 bp AGACGCAGCCAATTACATTGGATCAGACAGTCCAGTGAGCAGATGTTGTGCACACGAGGTACGATGGGCTaGTCCACAGCAGTCACGTCT +
Preference number: 4 (lower is better)
Translates to: RRSQLHWIRQSSEQMLCTRGTMG*STAVTS
Trigger: AGACGTGACTGCTGTGGAGCAGCCCATCGTACCTCG...TGTGCACAACATCTGCTCACTGGACTGTCTGATCCAATGTAATTGGCTGCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAACGTAGCTGGAGGTCATaGTCTCCCCCACCGATCCCA +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEERSWRS*SPPPIP
Trigger: TGGGATCGGTGGGGGAGACCATGACCTCCAGCTACG...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR GCA 90 bp GTTGATGCCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATAAGTTCTTTTTCGCCTaGAGGGTGTCGAGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: VDALCRAIVGTCGRISSHKFFFA*RVSRLP
Trigger: GGGCAACCTCGACACCCTGCAGGCGAAAAAGAACTT...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGCATCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR GCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTGTTCTCATCCGCCTGTaGCGCCACCATGTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPVLIRL*RHHVPG
Trigger: GCCGGGGACATGGTGGCGGCACAGGCGGATGAGAAC...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR GCA 90 bp TTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACAAGTTACGTCCCTGGTCATTGTCCTGCTaGGGGGTGTCGCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LLQSLPLALYLEFYKLRPWSLSC*GVSLPL
Trigger: CAGCGGCAGCGACACCCCGCAGCAGGACAATGACCA...GGGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp GGGGAACTCTTCAGGAAGCAAGTAATGCGTGCTGTTCAGCAAGCCTACATGAACTGGCTCTCTCATTCCTaGGGAACTTGGCTCTTCGGT +
Preference number: 4 (lower is better)
Translates to: GELFRKQVMRAVQQAYMNWLSHS*GTWLFG
Trigger: ACCGAAGAGCCAAGTTCCGCAGGAATGAGAGAGCCA...GTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTGAAGAGTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp AATGTCTCTGAAGAGATTAACCCAGTAAGAAATGTCGGTGAGCTGCACAAGCAGTGCCCCTCTCACTTCTaGCCCAAACCCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NVSEEINPVRNVGELHKQCPSHF*PKPCCW
Trigger: CCAGCAGCAGGGTTTGGGGCAGAAGTGAGAGGGGCA...CTGCTTGTGCAGCTCACCGACATTTCTTACTGGGTTAATCTCTTCAGAGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CCA 90 bp ACCCAGACAGAAAAAGGGGCAATACTTCCTGGTTGTGACCAAATTCAAACCAGACGTAGCTGGAGGTCATaGTCTCCCCCACCGATCCCA +
Preference number: 4 (lower is better)
Translates to: TQTEKGAILPGCDQIQTRRSWRS*SPPPIP
Trigger: TGGGATCGGTGGGGGAGACCATGACCTCCAGCTACG...TCTGGTTTGAATTTGGTCACAACCAGGAAGTATTGCCCCTTTTTCTGTCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CCA 90 bp GAGGAACAGGGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACTCCAAAGCCTGCAGCTaGCTGCTATTGAAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: EEQGYVLTFAALRTSTDNSKACS*LLLKVV
Trigger: GACAACCTTCAATAGCAGCCAGCTGCAGGCTTTGGA...GTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACCCTGTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp AATCTGATATGCCAAGGGAAATACAAATGTGTGCTAAAAGTGCATCTTAAACCCTGTCGCTGCCGCTGGTaGGTCCCGGCGACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: NLICQGKYKCVLKVHLKPCRCRW*VPATPA
Trigger: TGCTGGAGTCGCCGGGACTCACCAGCGGCAGCGACA...GGGTTTAAGATGCACTTTTAGCACACATTTGTATTTCCCTTGGCATATCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp TGCACAAGCAGCTTGAAACATGACCGACCGCTGAGAAACATGTGGAAGTGGAGCAAGCAGCTTGAAACATaGCCGACCGCTGAGAAACAT +
Preference number: 4 (lower is better)
Translates to: CTSSLKHDRPLRNMWKWSKQLET*PTAEKH
Trigger: ATGTTTCTCAGCGGTCGGTCATGTTTCAAGCTGCTT...GCTCCACTTCCACATGTTTCTCAGCGGTCGGTCATGTTTCAAGCTGCTTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR TCA 90 bp TGCACAAGCAGCTTGAAACATGACCGACCGCTGAGAAACATGTGGAAGTGGAGCCTTTGCAAGAGTTCCTaGGTCCAAGAGGAGATTGGT +
Preference number: 4 (lower is better)
Translates to: CTSSLKHDRPLRNMWKWSLCKSS*VQEEIG
Trigger: ACCAATCTCCTCTTGGACTCAGGAACTCTTGCAAAG...GCTCCACTTCCACATGTTTCTCAGCGGTCGGTCATGTTTCAAGCTGCTTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp AATGTTTCAGTCTGTTGGGATGTACAGTTCCTTCAAAACTTGATAATCCACAGCGTTCTCATCCGCCTGTaGCGCCACCATGTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: NVSVCWDVQFLQNLIIHSVLIRL*RHHVPG
Trigger: GCCGGGGACATGGTGGCGGCACAGGCGGATGAGAAC...GCTGTGGATTATCAAGTTTTGAAGGAACTGTACATCCCAACAGACTGAAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp TTGAGGACACAGGCAGATAGTTCCTATGTATTCACCTGTATCTGGTATCATGATTGGTCATTGTCCTGCTaGGGGGTGTCGCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LRTQADSSYVFTCIWYHDWSLSC*GVSLPL
Trigger: CAGCGGCAGCGACACCCCGCAGCAGGACAATGACCA...ATCATGATACCAGATACAGGTGAATACATAGGAACTATCTGCCTGTGTCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTTGGTCATTGTCCTGCTaGGGGGTGTCGCTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPWSLSC*GVSLPL
Trigger: CAGCGGCAGCGACACCCCGCAGCAGGACAATGACCA...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR GCA 90 bp AGACGCAGCCAATTACATTGGATCAGACAGTCCAGTGAGCAGATGTTGTGCACAACACGCTCCAAAGCCTaGAGCTGGCTGCTATTGAAG +
Preference number: 4 (lower is better)
Translates to: RRSQLHWIRQSSEQMLCTTRSKA*SWLLLK
Trigger: CTTCAATAGCAGCCAGCTGCAGGCTTTGGAGCGTGT...TGTGCACAACATCTGCTCACTGGACTGTCTGATCCAATGTAATTGGCTGCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp GTTGATGCCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATAAAGCCTTTGTGCTGTaGCTGACGTTTCACAGACCC +
Preference number: 4 (lower is better)
Translates to: VDALCRAIVGTCGRISSHKAFVL*LTFHRP
Trigger: GGGTCTGTGAAACGTCAGGCACAGCACAAAGGCTTT...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGCATCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR CCA 90 bp GTTGATGCCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATTCCAAAGCCTGCAGCTaGCTGCTATTGAAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: VDALCRAIVGTCGRISSHSKACS*LLLKVV
Trigger: GACAACCTTCAATAGCAGCCAGCTGCAGGCTTTGGA...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGCATCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR CCA 90 bp AATGTAGTTGGTCAAGTCCACCTGGCAAGTTACAAAAGCATGGCTGGGAACAAACAGGACGAGGTACGATaGGCTGCTCCACAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: NVVGQVHLASYKSMAGNKQDEVR*AAPQQS
Trigger: TGACTGCTGTGGAGCAGCCCATCGTACCTCGTCCTG...TTTGTTCCCAGCCATGCTTTTGTAACTTGCCAGGTGGACTTGACCAACTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp GTTGATGCCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATGTGGATTCTCAGGAGTaGCTAAAGTTTCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: VDALCRAIVGTCGRISSHVDSQE*LKFQEE
Trigger: CTCCTCCTGAAACTTTAGTCACTCCTGAGAATCCAC...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGCATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR TCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAATTCCGCAGCATTGGTTaGTTTCCTGAGGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEEFRSIG*FPEAKS
Trigger: GGACTTGGCCTCAGGAAATCAACCAATGCTGCGGAA...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR TCA 90 bp AATGTCTCTGAAGAGATTAACCCAGTAAGAAATGTCGGTGAGCTGCACAAGCAGCCAAGAGGAGATTGGTaGGATAGCCTGCCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: NVSEEINPVRNVGELHKQPRGDW*DSLPLS
Trigger: TGAGAGGGGCAGGCTATCTCACCAATCTCCTCTTGG...CTGCTTGTGCAGCTCACCGACATTTCTTACTGGGTTAATCTCTTCAGAGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAAAAGTTCTTTTTCGCCTaGAGGGTGTCGAGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEEKFFFA*RVSRLP
Trigger: GGGCAACCTCGACACCCTGCAGGCGAAAAAGAACTT...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR GCA 90 bp GATATAACTAATGTTTCAAGATCAGTAAGGCACACCACATCTGAGTGCAATAGGAGCTGGTCATTGTCCTaGTGCGGGGTGTCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: DITNVSRSVRHTTSECNRSWSLS*CGVSLP
Trigger: CGGCAGCGACACCCCGCAGCAGGACAATGACCAGCT...CCTATTGCACTCAGATGTGGTGTGCCTTACTGATCTTGAAACATTAGTTATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAAACACGCTCCAAAGCCTaGAGCTGGCTGCTATTGAAG +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEETRSKA*SWLLLK
Trigger: CTTCAATAGCAGCCAGCTGCAGGCTTTGGAGCGTGT...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR GCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAATGGCTCTCTCATTCCTaGGGAACTTGGCTCTTCGGT +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEEWLSHS*GTWLFG
Trigger: ACCGAAGAGCCAAGTTCCGCAGGAATGAGAGAGCCA...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR GCA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATCGAGGTACGATGGGCTaGTCCACAGCAGTCACGTCT +
Preference number: 4 (lower is better)
Translates to: PPADEEITEQDRCLMVFDRGTMG*STAVTS
Trigger: AGACGTGACTGCTGTGGAGCAGCCCATCGTACCTCG...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTCGTAGCTGGAGGTCATaGTCTCCCCCACCGATCCCA +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPRSWRS*SPPPIP
Trigger: TGGGATCGGTGGGGGAGACCATGACCTCCAGCTACG...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTGAACGTGCCCGTAGCTaGAGGTCATGGTCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPERARS*RSWSPP
Trigger: TGGGGGAGACCATGACCTCCAGCTACGGGCACGTTC...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CCA 90 bp TTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACAAGTTACGTCCCCAGGACGAGGTACGATaGGCTGCTCCACAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LLQSLPLALYLEFYKLRPQDEVR*AAPQQS
Trigger: TGACTGCTGTGGAGCAGCCCATCGTACCTCGTCCTG...GGGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CCA 90 bp ACCCAGACAGAAAAAGGGGCAATACTTCCTGGTTGTGACCAAATTCAAACCAGAAGGAGAGATAATCGGTaGGTCTCGGAGCAGGACGAG +
Preference number: 4 (lower is better)
Translates to: TQTEKGAILPGCDQIQTRRRDNR*VSEQDE
Trigger: CTCGTCCTGCTCCGAGACCCACCGATTATCTCTCCT...TCTGGTTTGAATTTGGTCACAACCAGGAAGTATTGCCCCTTTTTCTGTCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CCA 90 bp CAGGAAGCAAGTAATGCGTGCTGTTCAGCAAGCCTACATGAACCATTCAGTAAGAGAAACAAGTGGTGGTaGTATCCCAGAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QEASNACCSASLHEPFSKRNKWW*YPRGRR
Trigger: CCTCCTCCCTCTGGGATACCACCACCACTTGTTTCT...CTTACTGAATGGTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAAAGAAACAAGTGGTGGTaGTATCCCAGAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEERNKWW*YPRGRR
Trigger: CCTCCTCCCTCTGGGATACCACCACCACTTGTTTCT...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAACACAGAAACAAGTGGTaGTGGTATCCCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEEHRNKW*WYPRGR
Trigger: CCTCCCTCTGGGATACCACCACCACTTGTTTCTGTG...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CCA 90 bp GGGGAACTCTTCAGGAAGCAAGTAATGCGTGCTGTTCAGCAAGCCTACATGAACCGCAGCCAATTACATTaGATCAGACAGTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: GELFRKQVMRAVQQAYMNRSQLH*IRQSSE
Trigger: CTCACTGGACTGTCTGATCCAATGTAATTGGCTGCG...GTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTGAAGAGTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR CAA 72 bp ATCTGGTATCATGATGGTGAGGAACAGGGTTATGTCTaGACATTTGCAGCCCTGAGGACCTCCACTGACAAC +
Preference number: 4 (lower is better)
Translates to: IWYHDGEEQGYV*TFAALRTSTDN
Trigger: GTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACCCTGTTCCTCACCATCATGATACCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR CAA 72 bp TCCTCCACTGAAATCAGCCAGGGAGAACACGTAGGCTaGGCCTGGTTTCTCAGAGTACTCAGGTATATTTTC +
Preference number: 4 (lower is better)
Translates to: SSTEISQGEHVG*AWFLRVLRYIF
Trigger: GAAAATATACCTGAGTACTCTGAGAAACCAGGCCAAGCCTACGTGTTCTCCCTGGCTGATTTCAGTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CAA 72 bp CTCTCACTGGTAAGGACCACGTGGCAGCCATCTGGATaGTTTATGGCTGGTATGAAAAGTTCCTATGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSLVRTTWQPSG*FMAGMKSSYGG
Trigger: TCCTCCATAGGAACTTTTCATACCAGCCATAAACAATCCAGATGGCTGCCACGTGGTCCTTACCAGTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR TCA 90 bp CCAGCACAGATTCTTCAGAAAGACTTTGGCTTTTCGAAAGCTCCTAGAGCTTCTAGCAGTCACGTCTCCTaGGTAGGATTTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PAQILQKDFGFSKAPRASSSHVS*VGFEEG
Trigger: TCCCTCCTCAAATCCTACTCAGGAGACGTGACTGCT...AGAAGCTCTAGGAGCTTTCGAAAAGCCAAAGTCTTTCTGAAGAATCTGTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp GAGGAACAGGGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACGGAAAAACCTTACCATaGCCAACAAAGATGGAGACA +
Preference number: 4 (lower is better)
Translates to: EEQGYVLTFAALRTSTDNGKTLP*PTKMET
Trigger: TGTCTCCATCTTTGTTGGTCATGGTAAGGTTTTTCC...GTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACCCTGTTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATCCTTTGTGCTGTGCCTaGCGTTTCACAGACCCCCTT +
Preference number: 4 (lower is better)
Translates to: PPADEEITEQDRCLMVFDPLCCA*RFTDPL
Trigger: AAGGGGGTCTGTGAAACGTCAGGCACAGCACAAAGG...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR TCA 90 bp AATGTCTCTGAAGAGATTAACCCAGTAAGAAATGTCGGTGAGCTGCACAAGCAGTTCCGCAGCATTGGTTaGTTTCCTGAGGCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: NVSEEINPVRNVGELHKQFRSIG*FPEAKS
Trigger: GGACTTGGCCTCAGGAAATCAACCAATGCTGCGGAA...CTGCTTGTGCAGCTCACCGACATTTCTTACTGGGTTAATCTCTTCAGAGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp AGACGCAGCCAATTACATTGGATCAGACAGTCCAGTGAGCAGATGTTGTGCACATTATGTCTTGACATTTaGAGCCCTGAGGACCTCCAC +
Preference number: 4 (lower is better)
Translates to: RRSQLHWIRQSSEQMLCTLCLDI*SPEDLH
Trigger: GTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAA...TGTGCACAACATCTGCTCACTGGACTGTCTGATCCAATGTAATTGGCTGCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp GTTGATGCCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATGGGAAGCGTTTTTATTaGCTAGCATGGCTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: VDALCRAIVGTCGRISSHGKRFY*LAWLSH
Trigger: ATGAGAGAGCCATGCTAGCCAATAAAAACGCTTCCC...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGCATCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR CCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTCAGGACGAGGTACGATaGGCTGCTCCACAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPQDEVR*AAPQQS
Trigger: TGACTGCTGTGGAGCAGCCCATCGTACCTCGTCCTG...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CCA 90 bp CAGGAAGCAAGTAATGCGTGCTGTTCAGCAAGCCTACATGAACCATTCAGTAAGACACACAGAAACAAGTaGTGGTGGTATCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: QEASNACCSASLHEPFSKTHRNK*WWYPRG
Trigger: CCCTCTGGGATACCACCACCACTTGTTTCTGTGTGT...CTTACTGAATGGTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAAACACACAGAAACAAGTaGTGGTGGTATCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEETHRNK*WWYPRG
Trigger: CCCTCTGGGATACCACCACCACTTGTTTCTGTGTGT...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CCA 90 bp TCCAATGGGTTAGGAATTTGTGTCTCAGCTTCCCTTCTGGCAGCCTATATTTTCTGGAGCAAGGGAGAGTaGGCCAGTCATTCACCTGTA +
Preference number: 4 (lower is better)
Translates to: SNGLGICVSASLLAAYIFWSKGE*ASHSPV
Trigger: TACAGGTGAATGACTGGCCCACTCTCCCTTGCTCCA...GAAAATATAGGCTGCCAGAAGGGAAGCTGAGACACAAATTCCTAACCCATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CCA 90 bp AATGTCTCTGAAGAGATTAACCCAGTAAGAAATGTCGGTGAGCTGCACAAGCAGCCGCTGAGAAACATGTaGAAGTGGAGCAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: NVSEEINPVRNVGELHKQPLRNM*KWSKGE
Trigger: CTCTCCCTTGCTCCACTTCCACATGTTTCTCAGCGG...CTGCTTGTGCAGCTCACCGACATTTCTTACTGGGTTAATCTCTTCAGAGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR TCA 90 bp GAGGAACAGGGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACTGGTGGCTGTTAGATTaGAATAACATCACCATTAGC +
Preference number: 4 (lower is better)
Translates to: EEQGYVLTFAALRTSTDNWWLLD*NNITIS
Trigger: GCTAATGGTGATGTTATTTCAATCTAACAGCCACCA...GTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACCCTGTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp CAGGAAGCAAGTAATGCGTGCTGTTCAGCAAGCCTACATGAACCATTCAGTAAGAATGGGACAAATGGATaGATGGGGGAACTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QEASNACCSASLHEPFSKNGTNG*MGELFR
Trigger: CCTGAAGAGTTCCCCCATTCATCCATTTGTCCCATT...CTTACTGAATGGTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAATTGGTTCACCAGCAGTaGATGTTTCTTTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEELVHQQ*MFLWLT
Trigger: GGTCAGCCAAAGAAACATTCACTGCTGGTGAACCAA...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp AGACGCAGCCAATTACATTGGATCAGACAGTCCAGTGAGCAGATGTTGTGCACATGTTTGAAGGGAGATTaGGGACACAGGCAGATAGTT +
Preference number: 4 (lower is better)
Translates to: RRSQLHWIRQSSEQMLCTCLKGD*GHRQIV
Trigger: AACTATCTGCCTGTGTCCTCAATCTCCCTTCAAACA...TGTGCACAACATCTGCTCACTGGACTGTCTGATCCAATGTAATTGGCTGCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp AATGAATTTTTGAATAGTTCTTCCTCCACTGAAATCAGCCAGGGAGAACACGTACATTGGTTGATTTCCTaGGGCCAAGTCCGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: NEFLNSSSSTEISQGEHVHWLIS*GQVRRG
Trigger: ACCGCGCCGGACTTGGCCTCAGGAAATCAACCAATG...TACGTGTTCTCCCTGGCTGATTTCAGTGGAGGAAGAACTATTCAAAAATTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAAATTTTGCTCCTCTCCTaGTTTTCTCTGCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEEILLLS*FSLPWS
Trigger: GGACCATGGCAGAGAAAAGCAGGAGAGGAGCAAAAT...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR GCA 90 bp AGACGCAGCCAATTACATTGGATCAGACAGTCCAGTGAGCAGATGTTGTGCACATATGGGTTCAGGCTTTaGTGTTTGCCACTGGAAATG +
Preference number: 4 (lower is better)
Translates to: RRSQLHWIRQSSEQMLCTYGFRL*CLPLEM
Trigger: CATTTCCAGTGGCAAACAGCAAAGCCTGAACCCATA...TGTGCACAACATCTGCTCACTGGACTGTCTGATCCAATGTAATTGGCTGCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATAGGCACAAACTGGCATaGAGAGGAGGCTTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: PPADEEITEQDRCLMVFDRHKLA*RGGFVG
Trigger: CCCTACAAAGCCTCCTCTGCATGCCAGTTTGTGCCT...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR GCA 90 bp TTTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACAAGTTACGTCCATTGGTGAGATAGCCTaGCCCTCTCACTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: FTAKFAFGPILGVLQVTSIGEIA*PSHFCP
Trigger: GGGGCAGAAGTGAGAGGGGCAGGCTATCTCACCAAT...GGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CCA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATTCTTCTGAGTTCAGCTaGTCATTGTCCTGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: PPADEEITEQDRCLMVFDSSEFS*SLSCCG
Trigger: CCCGCAGCAGGACAATGACCAGCTGAACTCAGAAGA...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CCA 90 bp TTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACAAGTTACGTCCCTCTTCTGAGTTCAGCTaGTCATTGTCCTGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: LLQSLPLALYLEFYKLRPSSEFS*SLSCCG
Trigger: CCCGCAGCAGGACAATGACCAGCTGAACTCAGAAGA...GGGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTAGGAGAGATAATCGGTaGGTCTCGGAGCAGGACGAG +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPRRDNR*VSEQDE
Trigger: CTCGTCCTGCTCCGAGACCCACCGATTATCTCTCCT...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CCA 90 bp CATGATAGATCAGATGTATCAGCATTTCACCAGAGCTCAGGCTCCAAACTCAAGGTCCCTTTCCTCCCATaGCTACAAAGTGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: HDRSDVSAFHQSSGSKLKVPFLP*LQSAGH
Trigger: ATGTCCAGCACTTTGTAGCCATGGGAGGAAAGGGAC...CTTGAGTTTGGAGCCTGAGCTCTGGTGAAATGCTGATACATCTGATCTATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp GTTGATGCCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATGATCAAGAAGCTCTCTaGCACTTCAAAAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: VDALCRAIVGTCGRISSHDQEAL*HFKRHK
Trigger: TTTGTGCCTTTTGAAGTGCCAGAGAGCTTCTTGATC...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGCATCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR TCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTAGCAGTCACGTCTCCTaGGTAGGATTTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPSSHVS*VGFEEG
Trigger: TCCCTCCTCAAATCCTACTCAGGAGACGTGACTGCT...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR TCA 90 bp GAGGAACAGGGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACCAAAGTTGGCATGTTTaGCCAAAATTGATCCAAAGT +
Preference number: 4 (lower is better)
Translates to: EEQGYVLTFAALRTSTDNQSWHV*PKLIQS
Trigger: ACTTTGGATCAATTTTGGTCAAACATGCCAACTTTG...GTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACCCTGTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp AATGTAGTTGGTCAAGTCCACCTGGCAAGTTACAAAAGCATGGCTGGGAACAAAATTTTGCTCCTCTCCTaGTTTTCTCTGCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: NVVGQVHLASYKSMAGNKILLLS*FSLPWS
Trigger: GGACCATGGCAGAGAAAAGCAGGAGAGGAGCAAAAT...TTTGTTCCCAGCCATGCTTTTGTAACTTGCCAGGTGGACTTGACCAACTACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTCTCTCCCCCTCTTCTTaGTGGGCTCCTTTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPLSPSS*WAPFSF
Trigger: GAAGGAAAAAGGAGCCCAGCAAGAAGAGGGGGAGAG...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR CCA 90 bp AATGTTTCAGTCTGTTGGGATGTACAGTTCCTTCAAAACTTGATAATCCACAGCAGGAGAGATAATCGGTaGGTCTCGGAGCAGGACGAG +
Preference number: 4 (lower is better)
Translates to: NVSVCWDVQFLQNLIIHSRRDNR*VSEQDE
Trigger: CTCGTCCTGCTCCGAGACCCACCGATTATCTCTCCT...GCTGTGGATTATCAAGTTTTGAAGGAACTGTACATCCCAACAGACTGAAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp TTGAGGACACAGGCAGATAGTTCCTATGTATTCACCTGTATCTGGTATCATGATCACAGAAACAAGTGGTaGTGGTATCCCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LRTQADSSYVFTCIWYHDHRNKW*WYPRGR
Trigger: CCTCCCTCTGGGATACCACCACCACTTGTTTCTGTG...ATCATGATACCAGATACAGGTGAATACATAGGAACTATCTGCCTGTGTCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp GGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACTGGCTTAAGACATGCTTATGGTATTaGTTCACCAGCAGTGAATGT +
Preference number: 4 (lower is better)
Translates to: GYVLTFAALRTSTDNWLKTCLWY*FTSSEC
Trigger: ACATTCACTGCTGGTGAACCAATACCATAAGCATGT...CTTAAGCCAGTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp GGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACTGGCTTAAGGTATTCACCTGTATCTaGTATCATGATGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GYVLTFAALRTSTDNWLKVFTCI*YHDGEE
Trigger: TTCCTCACCATCATGATACCAGATACAGGTGAATAC...CTTAAGCCAGTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTGGTCTAGCAGGTGACTaGCGGAGAAGTTCTTTTTCG +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPGLAGD*RRSSFS
Trigger: CGAAAAAGAACTTCTCCGTCAGTCACCTGCTAGACC...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR TCA 90 bp TTGAGGACACAGGCAGATAGTTCCTATGTATTCACCTGTATCTGGTATCATGATGCAGCTGGCTGCTATTaGAGGTTGTCCTATTCCTTC +
Preference number: 4 (lower is better)
Translates to: LRTQADSSYVFTCIWYHDAAGCY*RLSYSF
Trigger: GAAGGAATAGGACAACCTTCAATAGCAGCCAGCTGC...ATCATGATACCAGATACAGGTGAATACATAGGAACTATCTGCCTGTGTCCTCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTGCAGCTGGCTGCTATTaGAGGTTGTCCTATTCCTTC +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPAAGCY*RLSYSF
Trigger: GAAGGAATAGGACAACCTTCAATAGCAGCCAGCTGC...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR TCA 90 bp CATGATAGATCAGATGTATCAGCATTTCACCAGAGCTCAGGCTCCAAACTCAAGCTCCTGAGTAGGATTTaGGGAGGGAAGCGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: HDRSDVSAFHQSSGSKLKLLSRI*GGKRFY
Trigger: ATAAAAACGCTTCCCTCCTCAAATCCTACTCAGGAG...CTTGAGTTTGGAGCCTGAGCTCTGGTGAAATGCTGATACATCTGATCTATCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp GATATAACTAATGTTTCAAGATCAGTAAGGCACACCACATCTGAGTGCAATAGGAGCAGTCACGTCTCCTaGGTAGGATTTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: DITNVSRSVRHTTSECNRSSHVS*VGFEEG
Trigger: TCCCTCCTCAAATCCTACTCAGGAGACGTGACTGCT...CCTATTGCACTCAGATGTGGTGTGCCTTACTGATCTTGAAACATTAGTTATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp AATGAATTTTTGAATAGTTCTTCCTCCACTGAAATCAGCCAGGGAGAACACGTAACACGCTCCAAAGCCTaGAGCTGGCTGCTATTGAAG +
Preference number: 4 (lower is better)
Translates to: NEFLNSSSSTEISQGEHVTRSKA*SWLLLK
Trigger: CTTCAATAGCAGCCAGCTGCAGGCTTTGGAGCGTGT...TACGTGTTCTCCCTGGCTGATTTCAGTGGAGGAAGAACTATTCAAAAATTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp AATGAATTTTTGAATAGTTCTTCCTCCACTGAAATCAGCCAGGGAGAACACGTATGGCTCTCTCATTCCTaGGGAACTTGGCTCTTCGGT +
Preference number: 4 (lower is better)
Translates to: NEFLNSSSSTEISQGEHVWLSHS*GTWLFG
Trigger: ACCGAAGAGCCAAGTTCCGCAGGAATGAGAGAGCCA...TACGTGTTCTCCCTGGCTGATTTCAGTGGAGGAAGAACTATTCAAAAATTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp TTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATTTTCGAGGTACGATGGGCTaGTCCACAGCAGTCACGTCT +
Preference number: 4 (lower is better)
Translates to: FLDVGSLCAKTKRIQANFRGTMG*STAVTS
Trigger: AGACGTGACTGCTGTGGAGCAGCCCATCGTACCTCG...AAAATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTCATGTTGATGCCCTGTaGAGGGCTATTGTTGGCACA +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPHVDAL*RAIVGT
Trigger: TGTGCCAACAATAGCCCTGCACAGGGCATCAACATG...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR GCA 90 bp CCAGCACAGATTCTTCAGAAAGACTTTGGCTTTTCGAAAGCTCCTAGAGCTTCTTCAGGCTTTGCTGTTTaGCACTGGAAATGGATGTCT +
Preference number: 4 (lower is better)
Translates to: PAQILQKDFGFSKAPRASSGFAV*HWKWMS
Trigger: AGACATCCATTTCCAGTGGCAAACAGCAAAGCCTGA...AGAAGCTCTAGGAGCTTTCGAAAAGCCAAAGTCTTTCTGAAGAATCTGTGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp ACCCAGACAGAAAAAGGGGCAATACTTCCTGGTTGTGACCAAATTCAAACCAGAGAAATGTCGGTGAGCTaGACAAGCAGCTTGAAACAT +
Preference number: 4 (lower is better)
Translates to: TQTEKGAILPGCDQIQTREMSVS*TSSLKH
Trigger: ATGTTTCAAGCTGCTTGTGCAGCTCACCGACATTTC...TCTGGTTTGAATTTGGTCACAACCAGGAAGTATTGCCCCTTTTTCTGTCTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp TCCAATGGGTTAGGAATTTGTGTCTCAGCTTCCCTTCTGGCAGCCTATATTTTCCAAAGCCAGTTTTACTaGAAAGTTTGCCTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SNGLGICVSASLLAAYIFQSQFY*KVCLWP
Trigger: GGGCCAAAGGCAAACTTTGCAGTAAAACTGGCTTTG...GAAAATATAGGCTGCCAGAAGGGAAGCTGAGACACAAATTCCTAACCCATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp TTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACAAGTTACGTCCCCACACCACATCTGAGTaGAATAGGGCCCAGAATAAG +
Preference number: 4 (lower is better)
Translates to: LLQSLPLALYLEFYKLRPHTTSE*NRAQNK
Trigger: CTTATTCTGGGCCCTATTGCACTCAGATGTGGTGTG...GGGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp TGCACAAGCAGCTTGAAACATGACCGACCGCTGAGAAACATGTGGAAGTGGAGCAAGGCACGCATAAATTaGCACGTTAATAATTTCAGT +
Preference number: 4 (lower is better)
Translates to: CTSSLKHDRPLRNMWKWSKARIN*HVNNFS
Trigger: ACTGAAATTATTAACGTGGCAATTTATGCGTGCCTT...GCTCCACTTCCACATGTTTCTCAGCGGTCGGTCATGTTTCAAGCTGCTTGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CCA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATGTGCAGGGCTATTGTTaGCACATGTGGCAGAATAAG +
Preference number: 4 (lower is better)
Translates to: PPADEEITEQDRCLMVFDVQGYC*HMWQNK
Trigger: CTTATTCTGCCACATGTGCCAACAATAGCCCTGCAC...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CCA 90 bp AGACGCAGCCAATTACATTGGATCAGACAGTCCAGTGAGCAGATGTTGTGCACAACAAAGAAAAAGAAATaGAAGATCAGTCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RRSQLHWIRQSSEQMLCTTKKKK*KISPGS
Trigger: GGAGCCAGGACTGATCTTCCATTTCTTTTTCTTTGT...TGTGCACAACATCTGCTCACTGGACTGTCTGATCCAATGTAATTGGCTGCGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAAATGGCTACAAAGTGCTaGACATACAGAGAATACAGG +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEEMATKC*TYREYR
Trigger: CCTGTATTCTCTGTATGTCCAGCACTTTGTAGCCAT...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTAAAATTGGAGACCCCTaGGAGGGCAGATCTCGACTT +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPKIGDP*EGRSRL
Trigger: AAGTCGAGATCTGCCCTCCCAGGGGTCTCCAATTTT...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR TCA 90 bp TTCAAAGCCAGTTTTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTAGGTCTAGCAGGTGACTaGCGGAGAAGTTCTTTTTCG +
Preference number: 4 (lower is better)
Translates to: FKASFTAKFAFGPILGVLGLAGD*RRSSFS
Trigger: CGAAAAAGAACTTCTCCGTCAGTCACCTGCTAGACC...TAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAAACTGGCTTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR TCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAACAAAGATGGAGACAATaGGAAAGGGAATTATGTCTG +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEEQRWRQ*ERELCL
Trigger: CAGACATAATTCCCTTTCTCATTGTCTCCATCTTTG...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAAACCATTAGCTCAATCTaGTATGCCAAGGGAAATACA +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEETISSI*YAKGNT
Trigger: TGTATTTCCCTTGGCATATCAGATTGAGCTAATGGT...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATTTCAGGAGGAGAGGGTaGTGTCTTGCAGATGTATTA +
Preference number: 4 (lower is better)
Translates to: PPADEEITEQDRCLMVFDFRRRG*CLADVL
Trigger: TAATACATCTGCAAGACATCACCCTCTCCTCCTGAA...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR TCA 90 bp GATATAACTAATGTTTCAAGATCAGTAAGGCACACCACATCTGAGTGCAATAGGAACATGACCGACCGCTaGGAAACATGTGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: DITNVSRSVRHTTSECNRNMTDR*ETCGSG
Trigger: TCCACTTCCACATGTTTCTCAGCGGTCGGTCATGTT...CCTATTGCACTCAGATGTGGTGTGCCTTACTGATCTTGAAACATTAGTTATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR TCA 90 bp ACCCAGACAGAAAAAGGGGCAATACTTCCTGGTTGTGACCAAATTCAAACCAGAGGGATGTCAGCAAGTTaGATGTCTCTGAAGAGATTA +
Preference number: 4 (lower is better)
Translates to: TQTEKGAILPGCDQIQTRGMSAS*MSLKRL
Trigger: TAATCTCTTCAGAGACATTCAACTTGCTGACATCCC...TCTGGTTTGAATTTGGTCACAACCAGGAAGTATTGCCCCTTTTTCTGTCTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR TCA 90 bp ACCCAGACAGAAAAAGGGGCAATACTTCCTGGTTGTGACCAAATTCAAACCAGATGTTTATGGCTGGTATaGAAAGTTCCTATGGAGGAC +
Preference number: 4 (lower is better)
Translates to: TQTEKGAILPGCDQIQTRCLWLV*KVPMED
Trigger: GTCCTCCATAGGAACTTTTCATACCAGCCATAAACA...TCTGGTTTGAATTTGGTCACAACCAGGAAGTATTGCCCCTTTTTCTGTCTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp ACTTTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATAAGTTCTTTTTCGCCTaGAGGGTGTCGAGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: TFLDVGSLCAKTKRIQANKFFFA*RVSRLP
Trigger: GGGCAACCTCGACACCCTGCAGGCGAAAAAGAACTT...ATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp AATGTTTCAGTCTGTTGGGATGTACAGTTCCTTCAAAACTTGATAATCCACAGCCATGTTGATGCCCTGTaGAGGGCTATTGTTGGCACA +
Preference number: 4 (lower is better)
Translates to: NVSVCWDVQFLQNLIIHSHVDAL*RAIVGT
Trigger: TGTGCCAACAATAGCCCTGCACAGGGCATCAACATG...GCTGTGGATTATCAAGTTTTGAAGGAACTGTACATCCCAACAGACTGAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAACTGTTCTCAAACAGCTaGCCTATCAATTATTCTGTG +
Preference number: 4 (lower is better)
Translates to: QNKHTQKQVVVVSQREEELFSNS*PINYSV
Trigger: CACAGAATAATTGATAGGGCAGCTGTTTGAGAACAG...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATGAAGCAAGTAATGCGTaGTGTTCAGCAAGCCTACAT +
Preference number: 4 (lower is better)
Translates to: PPADEEITEQDRCLMVFDEASNA*CSASLH
Trigger: ATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTC...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp AATCTGATATGCCAAGGGAAATACAAATGTGTGCTAAAAGTGCATCTTAAACCCTCTTCTGAGTTCAGCTaGTCATTGTCCTGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: NLICQGKYKCVLKVHLKPSSEFS*SLSCCG
Trigger: CCCGCAGCAGGACAATGACCAGCTGAACTCAGAAGA...GGGTTTAAGATGCACTTTTAGCACACATTTGTATTTCCCTTGGCATATCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp ATGGGACCTGTTCTCAAACAGCTGCCCTATCAATTATTCTGTGGCTTTAATGAAGTGCAGGGCTATTGTTaGCACATGTGGCAGAATAAG +
Preference number: 4 (lower is better)
Translates to: MGPVLKQLPYQLFCGFNEVQGYC*HMWQNK
Trigger: CTTATTCTGCCACATGTGCCAACAATAGCCCTGCAC...TTCATTAAAGCCACAGAATAATTGATAGGGCAGCTGTTTGAGAACAGGTCCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp CCAGCACAGATTCTTCAGAAAGACTTTGGCTTTTCGAAAGCTCCTAGAGCTTCTCTAGCTGAAGAAGCCTaGAGTACATTAAGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: PAQILQKDFGFSKAPRASLAEEA*STLSKA
Trigger: TGCTTTGCTTAATGTACTCCAGGCTTCTTCAGCTAG...AGAAGCTCTAGGAGCTTTCGAAAAGCCAAAGTCTTTCTGAAGAATCTGTGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTGAGCCTGTAATTACGTaGCAAAGCCTTTGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPEPVIT*QSLCAV
Trigger: CACAGCACAAAGGCTTTGCCACGTAATTACAGGCTC...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR CCA 90 bp TCCAATGGGTTAGGAATTTGTGTCTCAGCTTCCCTTCTGGCAGCCTATATTTTCTTGCAAGAGGAACACTaGGCACAGCTTAATGATCTT +
Preference number: 4 (lower is better)
Translates to: SNGLGICVSASLLAAYIFLQEEH*AQLNDL
Trigger: AAGATCATTAAGCTGTGCCCAGTGTTCCTCTTGCAA...GAAAATATAGGCTGCCAGAAGGGAAGCTGAGACACAAATTCCTAACCCATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CAA 72 bp ACCAAATTCAAACCAGAGATCTTGAAGCATCAGGCTTaGAACCACACCCATTTTCCAAGCCATTTAGCGTGT +
Preference number: 4 (lower is better)
Translates to: TKFKPEILKHQA*NHTHFPSHLAC
Trigger: ACACGCTAAATGGCTTGGAAAATGGGTGTGGTTCAAAGCCTGATGCTTCAAGATCTCTGGTTTGAATTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CAA 72 bp TACTTCCTGGTTGTGACCAAATTCAAACCAGAGATCTaGAAGCATCAGGCTTTGAACCACACCCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: YFLVVTKFKPEI*KHQALNHTHFP
Trigger: TGGAAAATGGGTGTGGTTCAAAGCCTGATGCTTCAAGATCTCTGGTTTGAATTTGGTCACAACCAGGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR TCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTCTCCTGAGTAGGATTTaGGGAGGGAAGCGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPLLSRI*GGKRFY
Trigger: ATAAAAACGCTTCCCTCCTCAAATCCTACTCAGGAG...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR TCA 90 bp TTTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACAAGTTACGTCCCTCCTGAGTAGGATTTaGGGAGGGAAGCGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: FTAKFAFGPILGVLQVTSLLSRI*GGKRFY
Trigger: ATAAAAACGCTTCCCTCCTCAAATCCTACTCAGGAG...GGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR TCA 90 bp AATGTAGTTGGTCAAGTCCACCTGGCAAGTTACAAAAGCATGGCTGGGAACAAAGCACTTGTTACTCTATaGTATTCCCAGACATTGCTT +
Preference number: 4 (lower is better)
Translates to: NVVGQVHLASYKSMAGNKALVTL*YSQTLL
Trigger: AAGCAATGTCTGGGAATATCATAGAGTAACAAGTGC...TTTGTTCCCAGCCATGCTTTTGTAACTTGCCAGGTGGACTTGACCAACTACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp AATGTCTCTGAAGAGATTAACCCAGTAAGAAATGTCGGTGAGCTGCACAAGCAGAATACTTCCTGGTTGTaGCCAAATTCAAACCAGAGA +
Preference number: 4 (lower is better)
Translates to: NVSEEINPVRNVGELHKQNTSWL*PNSNQR
Trigger: TCTCTGGTTTGAATTTGGTCACAACCAGGAAGTATT...CTGCTTGTGCAGCTCACCGACATTTCTTACTGGGTTAATCTCTTCAGAGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp ACTTTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATCATTCATGCAGTGTGTaGTGTGTGACGCCTCTCACT +
Preference number: 4 (lower is better)
Translates to: TFLDVGSLCAKTKRIQANHSCSV*CVTPLT
Trigger: AGTGAGAGGCGTCACACAGCACACACTGCATGAATG...ATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CCA 90 bp ACTTTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATTCCAAAGCCTGCAGCTaGCTGCTATTGAAGGTTGTC +
Preference number: 4 (lower is better)
Translates to: TFLDVGSLCAKTKRIQANSKACS*LLLKVV
Trigger: GACAACCTTCAATAGCAGCCAGCTGCAGGCTTTGGA...ATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CCA 90 bp ATGGGACCTGTTCTCAAACAGCTGCCCTATCAATTATTCTGTGGCTTTAATGAAGGGAAGCGTTTTTATTaGCTAGCATGGCTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: MGPVLKQLPYQLFCGFNEGKRFY*LAWLSH
Trigger: ATGAGAGAGCCATGCTAGCCAATAAAAACGCTTCCC...TTCATTAAAGCCACAGAATAATTGATAGGGCAGCTGTTTGAGAACAGGTCCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp AATCTGATATGCCAAGGGAAATACAAATGTGTGCTAAAAGTGCATCTTAAACCCCCTTCAGTCTCAGGTTaGCAATGCTGTTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: NLICQGKYKCVLKVHLKPPSVSG*QCCWPC
Trigger: ACATGGCCAACAGCATTGCCAACCTGAGACTGAAGG...GGGTTTAAGATGCACTTTTAGCACACATTTGTATTTCCCTTGGCATATCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATCTAGCTGAAGAAGCCTaGAGTACATTAAGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: PPADEEITEQDRCLMVFDLAEEA*STLSKA
Trigger: TGCTTTGCTTAATGTACTCCAGGCTTCTTCAGCTAG...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CCA 90 bp AATGTAGTTGGTCAAGTCCACCTGGCAAGTTACAAAAGCATGGCTGGGAACAAAACTTCACCTATCATTTaGGTTTATGGGTTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: NVVGQVHLASYKSMAGNKTSPII*VYGFRL
Trigger: AAGCCTGAACCCATAAACCCAAATGATAGGTGAAGT...TTTGTTCCCAGCCATGCTTTTGTAACTTGCCAGGTGGACTTGACCAACTACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp TTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATTTTCACGTAGGCTTGGCCTaGTTTCTCAGAGTACTCAGG +
Preference number: 4 (lower is better)
Translates to: FLDVGSLCAKTKRIQANFHVGLA*FLRVLR
Trigger: CCTGAGTACTCTGAGAAACCAGGCCAAGCCTACGTG...AAAATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CAA 72 bp AACTTCACCTATCATTTGGGTTTATGGGTTCAGGCTTaGCTGTTTGCCACTGGAAATGGATGTCTGAATCAA +
Preference number: 4 (lower is better)
Translates to: NFTYHLGLWVQA*LFATGNGCLNQ
Trigger: TTGATTCAGACATCCATTTCCAGTGGCAAACAGCAAAGCCTGAACCCATAAACCCAAATGATAGGTGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
3UTR CAA 72 bp GAAAGTCACTCTAGACTAATCCAATGGGTTAGGAATTaGTGTCTCAGCTTCCCTTCTGGCAGCCTATATTTT +
Preference number: 4 (lower is better)
Translates to: ESHSRLIQWVRN*CLSFPSGSLYF
Trigger: AAAATATAGGCTGCCAGAAGGGAAGCTGAGACACAAATTCCTAACCCATTGGATTAGTCTAGAGTGACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR TCA 90 bp ATTATACTCATTTCACTTAGAATGTTTCAGTCTGTTGGGATGTACAGTTCCTTCGGTCTAGCAGGTGACTaGCGGAGAAGTTCTTTTTCG +
Preference number: 4 (lower is better)
Translates to: IILISLRMFQSVGMYSSFGLAGD*RRSSFS
Trigger: CGAAAAAGAACTTCTCCGTCAGTCACCTGCTAGACC...GAAGGAACTGTACATCCCAACAGACTGAAACATTCTAAGTGAAATGAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp TTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATTTTGCAGCTGGCTGCTATTaGAGGTTGTCCTATTCCTTC +
Preference number: 4 (lower is better)
Translates to: FLDVGSLCAKTKRIQANFAAGCY*RLSYSF
Trigger: GAAGGAATAGGACAACCTTCAATAGCAGCCAGCTGC...AAAATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR TCA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATTTTAAAGCCCTAATGTaGAAATGGGACCTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PPADEEITEQDRCLMVFDFKALM*KWDLFS
Trigger: TGAGAACAGGTCCCATTTTCACATTAGGGCTTTAAA...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp TTGAGGACACAGGCAGATAGTTCCTATGTATTCACCTGTATCTGGTATCATGATAATCAGCATCTTGTTTaGAGGGAGATTGAGGACACA +
Preference number: 4 (lower is better)
Translates to: LRTQADSSYVFTCIWYHDNQHLV*REIEDT
Trigger: TGTGTCCTCAATCTCCCTTCAAACAAGATGCTGATT...ATCATGATACCAGATACAGGTGAATACATAGGAACTATCTGCCTGTGTCCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp ACTTTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATTTTCATCCCCATTCATaGAGTGTGTGCTGTGTGACG +
Preference number: 4 (lower is better)
Translates to: TFLDVGSLCAKTKRIQANFHPHS*SVCCVT
Trigger: CGTCACACAGCACACACTGCATGAATGGGGATGAAA...ATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CCA 90 bp TTCAAAGCCAGTTTTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTAGGGAAGCGTTTTTATTaGCTAGCATGGCTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: FKASFTAKFAFGPILGVLGKRFY*LAWLSH
Trigger: ATGAGAGAGCCATGCTAGCCAATAAAAACGCTTCCC...TAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAAACTGGCTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTTTCTATAAAGAGAACTaGGAAGAGGACAGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPFYKEN*EEDRVR
Trigger: CCTTACCCTGTCCTCTTCCCAGTTCTCTTTATAGAA...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp CAGGAAGCAAGTAATGCGTGCTGTTCAGCAAGCCTACATGAACCATTCAGTAAGTTAAGTCACCTCTTCTaGTTTAATTTAACCTGCCAA +
Preference number: 4 (lower is better)
Translates to: QEASNACCSASLHEPFSKLSHLF*FNLTCQ
Trigger: TTGGCAGGTTAAATTAAACCAGAAGAGGTGACTTAA...CTTACTGAATGGTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp TTTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACAAGTTACGTCCTCTCAGCTTCCCTTCTaGCAGCCTATATTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FTAKFAFGPILGVLQVTSSQLPF*QPIFSE
Trigger: TTCAGAAAATATAGGCTGCCAGAAGGGAAGCTGAGA...GGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CCA 90 bp AATGTCTCTGAAGAGATTAACCCAGTAAGAAATGTCGGTGAGCTGCACAAGCAGTATGAAAAGTTCCTATaGAGGACCCAGACAGAAAAA +
Preference number: 4 (lower is better)
Translates to: NVSEEINPVRNVGELHKQYEKFL*RTQTEK
Trigger: TTTTTCTGTCTGGGTCCTCCATAGGAACTTTTCATA...CTGCTTGTGCAGCTCACCGACATTTCTTACTGGGTTAATCTCTTCAGAGACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATCTTACTCTCTCTAACTaGAATTCCCATGATAGATCA +
Preference number: 4 (lower is better)
Translates to: PPADEEITEQDRCLMVFDLTLSN*NSHDRS
Trigger: TGATCTATCATGGGAATTGCAGTTAGAGAGAGTAAG...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp ACTTTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATTTGTTCCAGAATTGTTaGAAGAGGAACACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: TFLDVGSLCAKTKRIQANLFQNC*KRNTGH
Trigger: GTGCCCAGTGTTCCTCTTGCAACAATTCTGGAACAA...ATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CCA 90 bp AATGAATTTTTGAATAGTTCTTCCTCCACTGAAATCAGCCAGGGAGAACACGTACAGCTTATAATCTCCTaGGAAAATGTGGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: NEFLNSSSSTEISQGEHVQLIIS*ENVGMS
Trigger: TGACATCCCCACATTTTCCCAGGAGATTATAAGCTG...TACGTGTTCTCCCTGGCTGATTTCAGTGGAGGAAGAACTATTCAAAAATTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR TCA 90 bp AATCTGATATGCCAAGGGAAATACAAATGTGTGCTAAAAGTGCATCTTAAACCCGAATGTTTCTTTGGCTaGCCAGCACTTGTTACTCTA +
Preference number: 4 (lower is better)
Translates to: NLICQGKYKCVLKVHLKPECFFG*PALVTL
Trigger: TAGAGTAACAAGTGCTGGTCAGCCAAAGAAACATTC...GGGTTTAAGATGCACTTTTAGCACACATTTGTATTTCCCTTGGCATATCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTTGCTTTTCTCTGCCATaGTCCCAATATTTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPCFSLP*SQYFSS
Trigger: AGAACTAAAATATTGGGACCATGGCAGAGAAAAGCA...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CCA 90 bp ATGGGACCTGTTCTCAAACAGCTGCCCTATCAATTATTCTGTGGCTTTAATGAAAATGTTTCAGTCTGTTaGGATGTACAGTTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: MGPVLKQLPYQLFCGFNENVSVC*DVQFLQ
Trigger: TTGAAGGAACTGTACATCCCAACAGACTGAAACATT...TTCATTAAAGCCACAGAATAATTGATAGGGCAGCTGTTTGAGAACAGGTCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTTATCATTTGGGTTTATaGGTTCAGGCTTTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPYHLGL*VQALLF
Trigger: AAACAGCAAAGCCTGAACCCATAAACCCAAATGATA...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp TTCAAAGCCAGTTTTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACTTTGGCCCTATACTTaGAGTTTTACAAGTTACGTC +
Preference number: 4 (lower is better)
Translates to: FKASFTAKFAFGPILGVLLWPYT*SFTSYV
Trigger: GACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAG...TAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAAACTGGCTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CAA 72 bp TTTAATTCAAAGCCAGTTTTACTGCAAAGTTTGCCTTaGGCCCTATACTTGGAGTTTTACAAGTTACGTCCC +
Preference number: 4 (lower is better)
Translates to: FNSKPVLLQSLP*ALYLEFYKLRP
Trigger: GGGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAAACTGGCTTTGAATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR TCA 90 bp GATATAACTAATGTTTCAAGATCAGTAAGGCACACCACATCTGAGTGCAATAGGCATTTAGCGTGTTCATaGACACACCAAATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: DITNVSRSVRHTTSECNRHLACS*THQISL
Trigger: AAGAGAAATTTGGTGTGTTCATGAACACGCTAAATG...CCTATTGCACTCAGATGTGGTGTGCCTTACTGATCTTGAAACATTAGTTATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTTGCTTAGATAATACATaGTTATGGTATTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPCLDNT*LWYWFT
Trigger: GGTGAACCAATACCATAAGCATGTATTATCTAAGCA...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp AATCTGATATGCCAAGGGAAATACAAATGTGTGCTAAAAGTGCATCTTAAACCCTTGACTGTTGGCACCTaGTTCCTCTGTAAACTATAT +
Preference number: 4 (lower is better)
Translates to: NLICQGKYKCVLKVHLKPLTVGT*FLCKLY
Trigger: ATATAGTTTACAGAGGAACCAGGTGCCAACAGTCAA...GGGTTTAAGATGCACTTTTAGCACACATTTGTATTTCCCTTGGCATATCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp AATGTTTCAGTCTGTTGGGATGTACAGTTCCTTCAAAACTTGATAATCCACAGCTGCTTTTCTCTGCCATaGTCCCAATATTTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: NVSVCWDVQFLQNLIIHSCFSLP*SQYFSS
Trigger: AGAACTAAAATATTGGGACCATGGCAGAGAAAAGCA...GCTGTGGATTATCAAGTTTTGAAGGAACTGTACATCCCAACAGACTGAAACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp AATCTGATATGCCAAGGGAAATACAAATGTGTGCTAAAAGTGCATCTTAAACCCTTTGCTGTTTGCCACTaGAAATGGATGTCTGAATCA +
Preference number: 4 (lower is better)
Translates to: NLICQGKYKCVLKVHLKPFAVCH*KWMSES
Trigger: TGATTCAGACATCCATTTCCAGTGGCAAACAGCAAA...GGGTTTAAGATGCACTTTTAGCACACATTTGTATTTCCCTTGGCATATCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR TCA 90 bp TTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATTTTCAAATACACACAAACTaGTCCCCAGAGAAAACTTCA +
Preference number: 4 (lower is better)
Translates to: FLDVGSLCAKTKRIQANFQIHTN*SPEKTS
Trigger: TGAAGTTTTCTCTGGGGATCAGTTTGTGTGTATTTG...AAAATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR GCA 90 bp ATTATACTCATTTCACTTAGAATGTTTCAGTCTGTTGGGATGTACAGTTCCTTCGATATTCCCAGACATTaGTTGCTTGAGACATTGGAT +
Preference number: 4 (lower is better)
Translates to: IILISLRMFQSVGMYSSFDIPRH*LLETLD
Trigger: ATCCAATGTCTCAAGCAAGCAATGTCTGGGAATATC...GAAGGAACTGTACATCCCAACAGACTGAAACATTCTAAGTGAAATGAGTATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR GCA 90 bp AATCTGATATGCCAAGGGAAATACAAATGTGTGCTAAAAGTGCATCTTAAACCCTGGTTTAATTTAACCTaGCAAGTACCCTACAAATCA +
Preference number: 4 (lower is better)
Translates to: NLICQGKYKCVLKVHLKPWFNLT*QVPYKS
Trigger: TGATTTGTAGGGTACTTGGCAGGTTAAATTAAACCA...GGGTTTAAGATGCACTTTTAGCACACATTTGTATTTCCCTTGGCATATCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CCA 90 bp TTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATTTTTGGATTGTTTATGGCTaGTATGAAAAGTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: FLDVGSLCAKTKRIQANFWIVYG*YEKFLW
Trigger: CCATAGGAACTTTTCATACCAGCCATAAACAATCCA...AAAATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000497230.2
3UTR CAA 72 bp GGATTATACTCATTTCACTTAGAATGTTTCAGTCTGTaGGGATGTACAGTTCCTTCAAAACTTGATAATCCA +
Preference number: 4 (lower is better)
Translates to: GLYSFHLECFSL*GCTVPSKLDNP
Trigger: TGGATTATCAAGTTTTGAAGGAACTGTACATCCCAACAGACTGAAACATTCTAAGTGAAATGAGTATAATCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS CCA 90 bp CCATGGCGCTGTACGGAGACGCTGTCCCCCAGGAGAGATAATCGGTaGGTCTCGGAGCAGGACGAGGTACGATGGGCTGCTCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: PWRCTETLSPRRDNR*VSEQDEVRWAAPQQ
Trigger: CTGCTGTGGAGCAGCCCATCGTACCTCGTCCTGCTCCGAGACCCACCGATTATCTCTCCTGGGGGACAGCGTCTCCGTACAGCGCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000476867.6
CDS CCA 90 bp ACGAGGATCTGTACGGAGACGCTGTCCCCCAGGAGAGATAATCGGTaGGTCTCGGAGCAGGACGAGGTACGATGGGCTGCTCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: TRICTETLSPRRDNR*VSEQDEVRWAAPQQ
Trigger: CTGCTGTGGAGCAGCCCATCGTACCTCGTCCTGCTCCGAGACCCACCGATTATCTCTCCTGGGGGACAGCGTCTCCGTACAGATCCTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367760.7
ENST00000495280.5
CDS CCA 90 bp TCATTCACCTGTACGGAGACGCTGTCCCCCAGGAGAGATAATCGGTaGGTCTCGGAGCAGGACGAGGTACGATGGGCTGCTCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: SFTCTETLSPRRDNR*VSEQDEVRWAAPQQ
Trigger: CTGCTGTGGAGCAGCCCATCGTACCTCGTCCTGCTCCGAGACCCACCGATTATCTCTCCTGGGGGACAGCGTCTCCGTACAGGTGAATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS CCA 90 bp CATGACCGACCGCTGAGAAACATGTGGAAGTGGAGCAAGGGAGAGTaGGCCAGTCATTCACCTGTACGGAGACGCTGTCCCCCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: HDRPLRNMWKWSKGE*ASHSPVRRRCPPGE
Trigger: CTCTCCTGGGGGACAGCGTCTCCGTACAGGTGAATGACTGGCCCACTCTCCCTTGCTCCACTTCCACATGTTTCTCAGCGGTCGGTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp AATGTAGTTGGTCAAGTCCACCTGGCAAGTTACAAAAGCATGGCTGGGAACAAAGCCGCCCAGCGCCGGTaGCCGCTCCAGAACGTGCCC +
Preference number: 5 (lower is better)
Translates to: NVVGQVHLASYKSMAGNKAAQRR*PLQNVP
Trigger: GGGCACGTTCTGGAGCGGCAACCGGCGCTGGGCGGC...TTTGTTCCCAGCCATGCTTTTGTAACTTGCCAGGTGGACTTGACCAACTACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS TCA 90 bp TGTAGAGCAGAGCGTTGTGCACCAGCCGCCTTCCGCAGCATTGGTTaGTTTCCTGAGGCCAAGTCCGGCGCGGTCCAAAGAGATAATCCA +
Preference number: 5 (lower is better)
Translates to: CRAERCAPAAFRSIG*FPEAKSGAVQRDNP
Trigger: TGGATTATCTCTTTGGACCGCGCCGGACTTGGCCTCAGGAAATCAACCAATGCTGCGGAAGGCGGCTGGTGCACAACGCTCTGCTCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR CAA 90 bp TTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACAAGTTACGTCCCGCCGCCCAGCGCCGGTaGCCGCTCCAGAACGTGCCC +
Preference number: 5 (lower is better)
Translates to: LLQSLPLALYLEFYKLRPAAQRR*PLQNVP
Trigger: GGGCACGTTCTGGAGCGGCAACCGGCGCTGGGCGGC...GGGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTGCCGCCCAGCGCCGGTaGCCGCTCCAGAACGTGCCC +
Preference number: 5 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPAAQRR*PLQNVP
Trigger: GGGCACGTTCTGGAGCGGCAACCGGCGCTGGGCGGC...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS CCA 90 bp ACAAGCAGCTTGAAACATGACCGACCGCTGAGAAACATGTGGAAGTaGAGCAAGGGAGAGTGGGCCAGTCATTCACCTGTACGGAGACGC +
Preference number: 5 (lower is better)
Translates to: TSSLKHDRPLRNMWK*SKGEWASHSPVRRR
Trigger: GCGTCTCCGTACAGGTGAATGACTGGCCCACTCTCCCTTGCTCCACTTCCACATGTTTCTCAGCGGTCGGTCATGTTTCAAGCTGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS CCA 90 bp AGCTGCACAAGCAGCTTGAAACATGACCGACCGCTGAGAAACATGTaGAAGTGGAGCAAGGGAGAGTGGGCCAGTCATTCACCTGTACGG +
Preference number: 5 (lower is better)
Translates to: SCTSSLKHDRPLRNM*KWSKGEWASHSPVR
Trigger: CCGTACAGGTGAATGACTGGCCCACTCTCCCTTGCTCCACTTCCACATGTTTCTCAGCGGTCGGTCATGTTTCAAGCTGCTTGTGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS TCA 90 bp GTACGATGGGCTGCTCCACAGCAGTCACGTCTCCTGAGTAGGATTTaGGGAGGGAAGCGTTTTTATTGGCTAGCATGGCTCTCTCATTCC +
Preference number: 5 (lower is better)
Translates to: VRWAAPQQSRLLSRI*GGKRFYWLAWLSHS
Trigger: GGAATGAGAGAGCCATGCTAGCCAATAAAAACGCTTCCCTCCTCAAATCCTACTCAGGAGACGTGACTGCTGTGGAGCAGCCCATCGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239461.11
ENST00000367760.7
ENST00000476867.6
ENST00000495280.5
ENST00000497230.2
CDS-3UTR CAA 90 bp ATGGGACCTGTTCTCAAACAGCTGCCCTATCAATTATTCTGTGGCTTTAATGAATGCAGGGTGTCGAGGTaGCCCGGGCTGTCCAAGCGG +
Preference number: 5 (lower is better)
Translates to: MGPVLKQLPYQLFCGFNECRVSR*PGLSKR
Trigger: CCGCTTGGACAGCCCGGGCAACCTCGACACCCTGCA...TTCATTAAAGCCACAGAATAATTGATAGGGCAGCTGTTTGAGAACAGGTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTTGCAGGGTGTCGAGGTaGCCCGGGCTGTCCAAGCGG +
Preference number: 5 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPCRVSR*PGLSKR
Trigger: CCGCTTGGACAGCCCGGGCAACCTCGACACCCTGCA...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CAA 90 bp AATGTAGTTGGTCAAGTCCACCTGGCAAGTTACAAAAGCATGGCTGGGAACAAAGAGTTCAGCTGGTCATaGTCCTGCTGCGGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: NVVGQVHLASYKSMAGNKEFSWS*SCCGVS
Trigger: CGACACCCCGCAGCAGGACAATGACCAGCTGAACTC...TTTGTTCCCAGCCATGCTTTTGTAACTTGCCAGGTGGACTTGACCAACTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp AATGTCTCTGAAGAGATTAACCCAGTAAGAAATGTCGGTGAGCTGCACAAGCAGGAGTTCAGCTGGTCATaGTCCTGCTGCGGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: NVSEEINPVRNVGELHKQEFSWS*SCCGVS
Trigger: CGACACCCCGCAGCAGGACAATGACCAGCTGAACTC...CTGCTTGTGCAGCTCACCGACATTTCTTACTGGGTTAATCTCTTCAGAGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATGAGTTCAGCTGGTCATaGTCCTGCTGCGGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: PPADEEITEQDRCLMVFDEFSWS*SCCGVS
Trigger: CGACACCCCGCAGCAGGACAATGACCAGCTGAACTC...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CAA 90 bp CAGGAAGCAAGTAATGCGTGCTGTTCAGCAAGCCTACATGAACCATTCAGTAAGGCCTTCAGTCTCAGGTaGGCAATGCTGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: QEASNACCSASLHEPFSKAFSLR*AMLLAM
Trigger: CATGGCCAACAGCATTGCCAACCTGAGACTGAAGGC...CTTACTGAATGGTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp TCCAATGGGTTAGGAATTTGTGTCTCAGCTTCCCTTCTGGCAGCCTATATTTTCCCGCCTTCCGCAGCATaGGTTGATTTCCTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: SNGLGICVSASLLAAYIFPPSAA*VDFLRP
Trigger: TGGCCTCAGGAAATCAACCAATGCTGCGGAAGGCGG...GAAAATATAGGCTGCCAGAAGGGAAGCTGAGACACAAATTCCTAACCCATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS CCA 90 bp CTTGCTGGGCTCCTTTTTCCTTCTCAGTTGGATCAAGAAGCTCTCTaGCACTTCAAAAGGCACAAACTGGCATGCAGAGGAGGCTTTGTA +
Preference number: 5 (lower is better)
Translates to: LAGLLFPSQLDQEAL*HFKRHKLACRGGFV
Trigger: TACAAAGCCTCCTCTGCATGCCAGTTTGTGCCTTTTGAAGTGCCAGAGAGCTTCTTGATCCAACTGAGAAGGAAAAAGGAGCCCAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR CAA 90 bp GAGGAACAGGGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACGCAGTGAATGTTTCTTaGGCTGACCAGCACTTGTTA +
Preference number: 5 (lower is better)
Translates to: EEQGYVLTFAALRTSTDNAVNVS*ADQHLL
Trigger: TAACAAGTGCTGGTCAGCCAAAGAAACATTCACTGC...GTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACCCTGTTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAAGGGAATACAAGAAAATaGGAGACCCCTGGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: QNKHTQKQVVVVSQREEEGNTRK*ETPGRA
Trigger: TGCCCTCCCAGGGGTCTCCAATTTTCTTGTATTCCC...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS GCA 90 bp AGTGAATCAGAGTTTGCACAGTCACGCGATCCCAGATGTTTCCTGTaGACAGCAATCTCTGAAGAGCCCTGCTCTAGATTAGTATCACAC +
Preference number: 5 (lower is better)
Translates to: SESEFAQSRDPRCFL*TAISEEPCSRLVSH
Trigger: GTGTGATACTAATCTAGAGCAGGGCTCTTCAGAGATTGCTGTGCACAGGAAACATCTGGGATCGCGTGACTGTGCAAACTCTGATTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496573.1
CDS-3UTR CAA 90 bp GAGGAACAGGGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACCCAGACATTGCTTGCTaGAGACATTGGATAAAACCA +
Preference number: 5 (lower is better)
Translates to: EEQGYVLTFAALRTSTDNPDIAC*RHWIKP
Trigger: TGGTTTTATCCAATGTCTCAAGCAAGCAATGTCTGG...GTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACCCTGTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTCCGCCTTCCGCAGCATaGGTTGATTTCCTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPPPSAA*VDFLRP
Trigger: TGGCCTCAGGAAATCAACCAATGCTGCGGAAGGCGG...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR CAA 90 bp TGCACAAGCAGCTTGAAACATGACCGACCGCTGAGAAACATGTGGAAGTGGAGCTCATCTTTGAAACCTTaGCAAGAGTTCCTGAGTCCA +
Preference number: 5 (lower is better)
Translates to: CTSSLKHDRPLRNMWKWSSSLKP*QEFLSP
Trigger: TGGACTCAGGAACTCTTGCAAAGGTTTCAAAGATGA...GCTCCACTTCCACATGTTTCTCAGCGGTCGGTCATGTTTCAAGCTGCTTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp TGCACAAGCAGCTTGAAACATGACCGACCGCTGAGAAACATGTGGAAGTGGAGCAGTTTTGTTCCAGAATaGTTGCAAGAGGAACACTGG +
Preference number: 5 (lower is better)
Translates to: CTSSLKHDRPLRNMWKWSSFVPE*LQEEHW
Trigger: CCAGTGTTCCTCTTGCAACAATTCTGGAACAAAACT...GCTCCACTTCCACATGTTTCTCAGCGGTCGGTCATGTTTCAAGCTGCTTGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp TCCAATGGGTTAGGAATTTGTGTCTCAGCTTCCCTTCTGGCAGCCTATATTTTCGGAGAACACGTAGGCTaGGCCTGGTTTCTCAGAGTA +
Preference number: 5 (lower is better)
Translates to: SNGLGICVSASLLAAYIFGEHVG*AWFLRV
Trigger: TACTCTGAGAAACCAGGCCAAGCCTACGTGTTCTCC...GAAAATATAGGCTGCCAGAAGGGAAGCTGAGACACAAATTCCTAACCCATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp CAGGAAGCAAGTAATGCGTGCTGTTCAGCAAGCCTACATGAACCATTCAGTAAGTGCAGCTGGCTGCTATaGAAGGTTGTCCTATTCCTT +
Preference number: 5 (lower is better)
Translates to: QEASNACCSASLHEPFSKCSWLL*KVVLFL
Trigger: AAGGAATAGGACAACCTTCAATAGCAGCCAGCTGCA...CTTACTGAATGGTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp CAGGAAGCAAGTAATGCGTGCTGTTCAGCAAGCCTACATGAACCATTCAGTAAGAGGGAAGCGTTTTTATaGGCTAGCATGGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: QEASNACCSASLHEPFSKREAFL*ASMALS
Trigger: TGAGAGAGCCATGCTAGCCAATAAAAACGCTTCCCT...CTTACTGAATGGTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAAAGGGAAGCGTTTTTATaGGCTAGCATGGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: QNKHTQKQVVVVSQREEEREAFL*ASMALS
Trigger: TGAGAGAGCCATGCTAGCCAATAAAAACGCTTCCCT...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CAA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTATGCTGTTGGCCATGTaGATGCCCTGTGCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPMLLAM*MPCAGL
Trigger: TAGCCCTGCACAGGGCATCAACATGGCCAACAGCAT...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CAA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTGCCTTCAGTCTCAGGTaGGCAATGCTGTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPAFSLR*AMLLAM
Trigger: CATGGCCAACAGCATTGCCAACCTGAGACTGAAGGC...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CAA 90 bp GTTGATGCCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATTGTAAACTATATTCCTaGGCCTTCAGTCTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: VDALCRAIVGTCGRISSHCKLYS*AFSLRL
Trigger: CAACCTGAGACTGAAGGCCAAGGAATATAGTTTACA...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGCATCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR CAA 90 bp CAGGAAGCAAGTAATGCGTGCTGTTCAGCAAGCCTACATGAACCATTCAGTAAGTTCAGGCTTTGCTGTTaGCCACTGGAAATGGATGTC +
Preference number: 5 (lower is better)
Translates to: QEASNACCSASLHEPFSKFRLCC*PLEMDV
Trigger: GACATCCATTTCCAGTGGCAAACAGCAAAGCCTGAA...CTTACTGAATGGTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp GGTTATGTCTTGACATTTGCAGCCCTGAGGACCTCCACTGACAACTGGCTTAAGATTCCCAGACATTGCTaGCTTGAGACATTGGATAAA +
Preference number: 5 (lower is better)
Translates to: GYVLTFAALRTSTDNWLKIPRHC*LETLDK
Trigger: TTTATCCAATGTCTCAAGCAAGCAATGTCTGGGAAT...CTTAAGCCAGTTGTCAGTGGAGGTCCTCAGGGCTGCAAATGTCAAGACATAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATCGTGTAAACAACATCTaGGGAGGGACGAGGATCTGT +
Preference number: 5 (lower is better)
Translates to: PPADEEITEQDRCLMVFDRVNNI*GGTRIC
Trigger: ACAGATCCTCGTCCCTCCCAAGATGTTGTTTACACG...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR CAA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATTGCAGCTGGCTGCTATaGAAGGTTGTCCTATTCCTT +
Preference number: 5 (lower is better)
Translates to: PPADEEITEQDRCLMVFDCSWLL*KVVLFL
Trigger: AAGGAATAGGACAACCTTCAATAGCAGCCAGCTGCA...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000239461.11
ENST00000367760.7
CDS-3UTR CAA 90 bp ATGGGACCTGTTCTCAAACAGCTGCCCTATCAATTATTCTGTGGCTTTAATGAAGAACAGGGTTATGTCTaGACATTTGCAGCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: MGPVLKQLPYQLFCGFNEEQGYV*TFAALR
Trigger: CCTCAGGGCTGCAAATGTCAAGACATAACCCTGTTC...TTCATTAAAGCCACAGAATAATTGATAGGGCAGCTGTTTGAGAACAGGTCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp ACCCAGACAGAAAAAGGGGCAATACTTCCTGGTTGTGACCAAATTCAAACCAGAGGGGATGTCAGCAAGTaGAATGTCTCTGAAGAGATT +
Preference number: 5 (lower is better)
Translates to: TQTEKGAILPGCDQIQTRGDVSK*NVSEEI
Trigger: AATCTCTTCAGAGACATTCAACTTGCTGACATCCCC...TCTGGTTTGAATTTGGTCACAACCAGGAAGTATTGCCCCTTTTTCTGTCTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp ACCCAGACAGAAAAAGGGGCAATACTTCCTGGTTGTGACCAAATTCAAACCAGACAATGGGTTAGGAATTaGTGTCTCAGCTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: TQTEKGAILPGCDQIQTRQWVRN*CLSFPS
Trigger: AGAAGGGAAGCTGAGACACAAATTCCTAACCCATTG...TCTGGTTTGAATTTGGTCACAACCAGGAAGTATTGCCCCTTTTTCTGTCTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS TCA 90 bp TGTAAACAACATCTTGGGAGGGACGAGGATCTATTTTTGAAAGTGTaGAAGGGAGAAATAAGCCAAATGCGTTCAGCAGATGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: CKQHLGRDEDLFLKV*KGEISQMRSADVRQ
Trigger: CTGCCTGACATCTGCTGAACGCATTTGGCTTATTTCTCCCTTTCACACTTTCAAAAATAGATCCTCGTCCCTCCCAAGATGTTGTTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485529.5
CDS-3UTR CAA 90 bp TTTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACAAGTTACGTCCAGGGAAGCGTTTTTATaGGCTAGCATGGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: FTAKFAFGPILGVLQVTSREAFL*ASMALS
Trigger: TGAGAGAGCCATGCTAGCCAATAAAAACGCTTCCCT...GGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp ATTATACTCATTTCACTTAGAATGTTTCAGTCTGTTGGGATGTACAGTTCCTTCCCCTGTGCAGGGCTATaGTTGGCACATGTGGCAGAA +
Preference number: 5 (lower is better)
Translates to: IILISLRMFQSVGMYSSFPCAGL*LAHVAE
Trigger: TTCTGCCACATGTGCCAACAATAGCCCTGCACAGGG...GAAGGAACTGTACATCCCAACAGACTGAAACATTCTAAGTGAAATGAGTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp ATTATACTCATTTCACTTAGAATGTTTCAGTCTGTTGGGATGTACAGTTCCTTCATGCTGTTGGCCATGTaGATGCCCTGTGCAGGGCTA +
Preference number: 5 (lower is better)
Translates to: IILISLRMFQSVGMYSSFMLLAM*MPCAGL
Trigger: TAGCCCTGCACAGGGCATCAACATGGCCAACAGCAT...GAAGGAACTGTACATCCCAACAGACTGAAACATTCTAAGTGAAATGAGTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp CAGGAAGCAAGTAATGCGTGCTGTTCAGCAAGCCTACATGAACCATTCAGTAAGTTCTTCAGAAAGACTTaGGCTTTTCGAAAGCTCCTA +
Preference number: 5 (lower is better)
Translates to: QEASNACCSASLHEPFSKFFRKT*AFRKLL
Trigger: TAGGAGCTTTCGAAAAGCCAAAGTCTTTCTGAAGAA...CTTACTGAATGGTTCATGTAGGCTTGCTGAACAGCACGCATTACTTGCTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp CCAGCACAGATTCTTCAGAAAGACTTTGGCTTTTCGAAAGCTCCTAGAGCTTCTAACTTCACCTATCATTaGGGTTTATGGGTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: PAQILQKDFGFSKAPRASNFTYH*GLWVQA
Trigger: AGCCTGAACCCATAAACCCAAATGATAGGTGAAGTT...AGAAGCTCTAGGAGCTTTCGAAAAGCCAAAGTCTTTCTGAAGAATCTGTGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp AATGTAGTTGGTCAAGTCCACCTGGCAAGTTACAAAAGCATGGCTGGGAACAAACTACAAATCAGCATCTaGTTTGAAGGGAGATTGAGG +
Preference number: 5 (lower is better)
Translates to: NVVGQVHLASYKSMAGNKLQISI*FEGRLR
Trigger: CCTCAATCTCCCTTCAAACAAGATGCTGATTTGTAG...TTTGTTCCCAGCCATGCTTTTGTAACTTGCCAGGTGGACTTGACCAACTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp CCCCCAGCAGATGAAGAAATAACAGAGCAGGATAGGTGTCTTATGGTTTTTGATCTTTTTCCTTCTCAGTaGGATCAAGAAGCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: PPADEEITEQDRCLMVFDLFPSQ*DQEALW
Trigger: CCAGAGAGCTTCTTGATCCAACTGAGAAGGAAAAAG...ATCAAAAACCATAAGACACCTATCCTGCTCTGTTATTTCTTCATCTGCTGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS-3UTR CAA 90 bp TTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATTTTAGCTGCACAAGCAGCTaGAAACATGACCGACCGCTG +
Preference number: 5 (lower is better)
Translates to: FLDVGSLCAKTKRIQANFSCTSS*KHDRPL
Trigger: CAGCGGTCGGTCATGTTTCAAGCTGCTTGTGCAGCT...AAAATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp TTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACAAGTTACGTCCCTTTGTTCCAGAATTGTaGCAAGAGGAACACTGGGCA +
Preference number: 5 (lower is better)
Translates to: LLQSLPLALYLEFYKLRPFVPEL*QEEHWA
Trigger: TGCCCAGTGTTCCTCTTGCAACAATTCTGGAACAAA...GGGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp TCCAATGGGTTAGGAATTTGTGTCTCAGCTTCCCTTCTGGCAGCCTATATTTTCTTCAAACCAGAGATCTaGAAGCATCAGGCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: SNGLGICVSASLLAAYIFFKPEI*KHQALN
Trigger: GTTCAAAGCCTGATGCTTCAAGATCTCTGGTTTGAA...GAAAATATAGGCTGCCAGAAGGGAAGCTGAGACACAAATTCCTAACCCATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp TTCAAAGCCAGTTTTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTATGCAGCTGGCTGCTATaGAAGGTTGTCCTATTCCTT +
Preference number: 5 (lower is better)
Translates to: FKASFTAKFAFGPILGVLCSWLL*KVVLFL
Trigger: AAGGAATAGGACAACCTTCAATAGCAGCCAGCTGCA...TAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAAACTGGCTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp AATGTAGTTGGTCAAGTCCACCTGGCAAGTTACAAAAGCATGGCTGGGAACAAAGTGAGGGTGTGTAATTaGCTTTTTGTATTGTTTGGG +
Preference number: 5 (lower is better)
Translates to: NVVGQVHLASYKSMAGNKVRVCN*LFVLFG
Trigger: CCCAAACAATACAAAAAGCAAATTACACACCCTCAC...TTTGTTCCCAGCCATGCTTTTGTAACTTGCCAGGTGGACTTGACCAACTACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp CAAAATAAACACACACAGAAACAAGTGGTGGTGGTATCCCAGAGGGAGGAGGAAACAAAGTTGGCATGTTaGACCAAAATTGATCCAAAG +
Preference number: 5 (lower is better)
Translates to: QNKHTQKQVVVVSQREEETKLAC*TKIDPK
Trigger: CTTTGGATCAATTTTGGTCAAACATGCCAACTTTGT...TTCCTCCTCCCTCTGGGATACCACCACCACTTGTTTCTGTGTGTGTTTATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp ATGGGACCTGTTCTCAAACAGCTGCCCTATCAATTATTCTGTGGCTTTAATGAATTATGGGTTCAGGCTTaGCTGTTTGCCACTGGAAAT +
Preference number: 5 (lower is better)
Translates to: MGPVLKQLPYQLFCGFNELWVQA*LFATGN
Trigger: ATTTCCAGTGGCAAACAGCAAAGCCTGAACCCATAA...TTCATTAAAGCCACAGAATAATTGATAGGGCAGCTGTTTGAGAACAGGTCCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp GTGGTATCCCAGAGGGAGGAGGAACATTTGTTAACTAATTTTCATTTTGCTCCTTTGTTTGAAGGGAGATaGAGGACACAGGCAGATAGT +
Preference number: 5 (lower is better)
Translates to: VVSQREEEHLLTNFHFAPLFEGR*RTQADS
Trigger: ACTATCTGCCTGTGTCCTCAATCTCCCTTCAAACAA...AGGAGCAAAATGAAAATTAGTTAACAAATGTTCCTCCTCCCTCTGGGATACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp TTTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTACAAGTTACGTCCTGGCAGCCATCTGGATaGTTTATGGCTGGTATGAAA +
Preference number: 5 (lower is better)
Translates to: FTAKFAFGPILGVLQVTSWQPSG*FMAGMK
Trigger: TTTCATACCAGCCATAAACAATCCAGATGGCTGCCA...GGACGTAACTTGTAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp ATGGGACCTGTTCTCAAACAGCTGCCCTATCAATTATTCTGTGGCTTTAATGAATGTAAACTATATTCCTaGGCCTTCAGTCTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: MGPVLKQLPYQLFCGFNECKLYS*AFSLRL
Trigger: CAACCTGAGACTGAAGGCCAAGGAATATAGTTTACA...TTCATTAAAGCCACAGAATAATTGATAGGGCAGCTGTTTGAGAACAGGTCCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp GATATAACTAATGTTTCAAGATCAGTAAGGCACACCACATCTGAGTGCAATAGGCTGCAAAGTTTGCCTTaGGCCCTATACTTGGAGTTT +
Preference number: 5 (lower is better)
Translates to: DITNVSRSVRHTTSECNRLQSLP*ALYLEF
Trigger: AAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAG...CCTATTGCACTCAGATGTGGTGTGCCTTACTGATCTTGAAACATTAGTTATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp AATCTGATATGCCAAGGGAAATACAAATGTGTGCTAAAAGTGCATCTTAAACCCTTGGCTGACCAGCACTaGTTACTCTATGATATTCCC +
Preference number: 5 (lower is better)
Translates to: NLICQGKYKCVLKVHLKPLADQH*LLYDIP
Trigger: GGGAATATCATAGAGTAACAAGTGCTGGTCAGCCAA...GGGTTTAAGATGCACTTTTAGCACACATTTGTATTTCCCTTGGCATATCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS-3UTR CAA 90 bp TTCAAAGCCAGTTTTACTGCAAAGTTTGCCTTTGGCCCTATACTTGGAGTTTTAGTTTTACTGCAAAGTTaGCCTTTGGCCCTATACTTG +
Preference number: 5 (lower is better)
Translates to: FKASFTAKFAFGPILGVLVLLQS*PLALYL
Trigger: CAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAAAC...TAAAACTCCAAGTATAGGGCCAAAGGCAAACTTTGCAGTAAAACTGGCTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp GATATAACTAATGTTTCAAGATCAGTAAGGCACACCACATCTGAGTGCAATAGGGTGATCAGAATGAACTaGGCTTTTCTTTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: DITNVSRSVRHTTSECNRVIRMN*AFLSSS
Trigger: AGAGGAGGAAAGAAAAGCCAAGTTCATTCTGATCAC...CCTATTGCACTCAGATGTGGTGTGCCTTACTGATCTTGAAACATTAGTTATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp ACTTTCCTAGATGTAGGGTCTCTATGTGCTAAGACAAAAAGAATTCAGGCTAATTTGAAGCATCAGGCTTaGAACCACACCCATTTTCCA +
Preference number: 5 (lower is better)
Translates to: TFLDVGSLCAKTKRIQANLKHQA*NHTHFP
Trigger: TGGAAAATGGGTGTGGTTCAAAGCCTGATGCTTCAA...ATTAGCCTGAATTCTTTTTGTCTTAGCACATAGAGACCCTACATCTAGGAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp GATATAACTAATGTTTCAAGATCAGTAAGGCACACCACATCTGAGTGCAATAGGGATTCTTCCTCATCTTaGAAACCTTTGCAAGAGTTC +
Preference number: 5 (lower is better)
Translates to: DITNVSRSVRHTTSECNRDSSSS*KPLQEF
Trigger: GAACTCTTGCAAAGGTTTCAAAGATGAGGAAGAATC...CCTATTGCACTCAGATGTGGTGTGCCTTACTGATCTTGAAACATTAGTTATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS-3UTR CAA 90 bp ATTATACTCATTTCACTTAGAATGTTTCAGTCTGTTGGGATGTACAGTTCCTTCGAATGTTTCAGTCTGTaGGGATGTACAGTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: IILISLRMFQSVGMYSSFECFSL*GCTVPS
Trigger: TGAAGGAACTGTACATCCCAACAGACTGAAACATTC...GAAGGAACTGTACATCCCAACAGACTGAAACATTCTAAGTGAAATGAGTATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239461.11
CDS CAA 90 bp GGTGTCGAGGTTGCCCGGGCTGTCCAAGCGGCCGCCCAGCGCCGGTaGCCGCTCCAGAACGTGCCCGTAGCTGGAGGTCATGGTCTCCCC +
Preference number: 6 (lower is better)
Translates to: GVEVARAVQAAAQRR*PLQNVPVAGGHGLP
Trigger: GGGGAGACCATGACCTCCAGCTACGGGCACGTTCTGGAGCGGCAACCGGCGCTGGGCGGCCGCTTGGACAGCCCGGGCAACCTCGACACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000239461.11
ENST00000367760.7
ENST00000497230.2
CDS CCA 72 bp CCAGCGCCGGTTGCCGCTCCAGAACGTGCCCGTAGCTaGAGGTCATGGTCTCCCCCACCGATCCCACCCACC +
Preference number: 6 (lower is better)
Translates to: PAPVAAPERARS*RSWSPPPIPPT
Trigger: GGTGGGTGGGATCGGTGGGGGAGACCATGACCTCCAGCTACGGGCACGTTCTGGAGCGGCAACCGGCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239461.11
ENST00000367760.7
ENST00000497230.2
CDS GCA 72 bp CGGAGAAGTTCTTTTTCGCCTGCAGGGTGTCGAGGTTaGCCGGGCTGTCCAAGCGGCCGCCCAGCGCCGGTT +
Preference number: 6 (lower is better)
Translates to: RRSSFSPAGCRG*PGCPSGRPAPV
Trigger: AACCGGCGCTGGGCGGCCGCTTGGACAGCCCGGGCAACCTCGACACCCTGCAGGCGAAAAAGAACTTCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239461.11
ENST00000367760.7
ENST00000497230.2
CDS CAA 72 bp ACGGAGAAGTTCTTTTTCGCCTGCAGGGTGTCGAGGTaGCCCGGGCTGTCCAAGCGGCCGCCCAGCGCCGGT +
Preference number: 6 (lower is better)
Translates to: TEKFFFACRVSR*PGLSKRPPSAG
Trigger: ACCGGCGCTGGGCGGCCGCTTGGACAGCCCGGGCAACCTCGACACCCTGCAGGCGAAAAAGAACTTCTCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000239461.11
ENST00000367760.7
ENST00000497230.2
CDS CAA 72 bp GAGCAGAGCGTTGTGCACCAGCCGCCTTCCGCAGCATaGGTTGATTTCCTGAGGCCAAGTCCGGCGCGGTCC +
Preference number: 6 (lower is better)
Translates to: EQSVVHQPPSAA*VDFLRPSPARS
Trigger: GGACCGCGCCGGACTTGGCCTCAGGAAATCAACCAATGCTGCGGAAGGCGGCTGGTGCACAACGCTCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367760.7
ENST00000497230.2
CDS TCA 72 bp GAGCGTTGTGCACCAGCCGCCTTCCGCAGCATTGGTTaGTTTCCTGAGGCCAAGTCCGGCGCGGTCCAAAGA +
Preference number: 6 (lower is better)
Translates to: ERCAPAAFRSIG*FPEAKSGAVQR
Trigger: TCTTTGGACCGCGCCGGACTTGGCCTCAGGAAATCAACCAATGCTGCGGAAGGCGGCTGGTGCACAACGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367760.7
ENST00000497230.2
CDS CCA 72 bp TGTACGGAGACGCTGTCCCCCAGGAGAGATAATCGGTaGGTCTCGGAGCAGGACGAGGTACGATGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: CTETLSPRRDNR*VSEQDEVRWAA
Trigger: AGCAGCCCATCGTACCTCGTCCTGCTCCGAGACCCACCGATTATCTCTCCTGGGGGACAGCGTCTCCGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239461.11
ENST00000367760.7
ENST00000476867.6
ENST00000495280.5
ENST00000497230.2
CDS CCA 72 bp GATAATCGGTGGGTCTCGGAGCAGGACGAGGTACGATaGGCTGCTCCACAGCAGTCACGTCTCCTGAGTAGG +
Preference number: 6 (lower is better)
Translates to: DNRWVSEQDEVR*AAPQQSRLLSR
Trigger: CCTACTCAGGAGACGTGACTGCTGTGGAGCAGCCCATCGTACCTCGTCCTGCTCCGAGACCCACCGATTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000239461.11
ENST00000367760.7
ENST00000476867.6
ENST00000495280.5
ENST00000497230.2
CDS CAA 90 bp CCTTCTGTAGAGCAGAGCGTTGTGCACCAGCCGCCTTCCGCAGCATaGGTTGATTTCCTGAGGCCAAGTCCGGCGCGGTCCAAAGAGATA +
Preference number: 6 (lower is better)
Translates to: PSVEQSVVHQPPSAA*VDFLRPSPARSKEI
Trigger: TATCTCTTTGGACCGCGCCGGACTTGGCCTCAGGAAATCAACCAATGCTGCGGAAGGCGGCTGGTGCACAACGCTCTGCTCTACAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS CCA 72 bp CCGCTGAGAAACATGTGGAAGTGGAGCAAGGGAGAGTaGGCCAGTCATTCACCTGTACGGAGACGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: PLRNMWKWSKGE*ASHSPVRRRCP
Trigger: GGGACAGCGTCTCCGTACAGGTGAATGACTGGCCCACTCTCCCTTGCTCCACTTCCACATGTTTCTCAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS TCA 72 bp AGGTACGATGGGCTGCTCCACAGCAGTCACGTCTCCTaGGTAGGATTTGAGGAGGGAAGCGTTTTTATTGGC +
Preference number: 6 (lower is better)
Translates to: RYDGLLHSSHVS*VGFEEGSVFIG
Trigger: GCCAATAAAAACGCTTCCCTCCTCAAATCCTACTCAGGAGACGTGACTGCTGTGGAGCAGCCCATCGTACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000239461.11
ENST00000367760.7
ENST00000476867.6
ENST00000495280.5
ENST00000497230.2
CDS CCA 72 bp AGCAGCTTGAAACATGACCGACCGCTGAGAAACATGTaGAAGTGGAGCAAGGGAGAGTGGGCCAGTCATTCA +
Preference number: 6 (lower is better)
Translates to: SSLKHDRPLRNM*KWSKGEWASHS
Trigger: TGAATGACTGGCCCACTCTCCCTTGCTCCACTTCCACATGTTTCTCAGCGGTCGGTCATGTTTCAAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497230.2
CDS CAA 72 bp AGAATCCGTTATGAAGCCCCTCGTGTAAACAACATCTaGGGAGGGACGAGGATCTGTACGGAGACGCTGTCC +
Preference number: 6 (lower is better)
Translates to: RIRYEAPRVNNI*GGTRICTETLS
Trigger: GGACAGCGTCTCCGTACAGATCCTCGTCCCTCCCAAGATGTTGTTTACACGAGGGGCTTCATAACGGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367760.7
ENST00000495280.5
CDS CAA 90 bp CACAAACTGGCATGCAGAGGAGGCTTTGTAGGGAATACAAGAAAATaGGAGACCCCTGGGAGGGCAGATCTCGACTTAATAGGAGCCTGT +
Preference number: 6 (lower is better)
Translates to: HKLACRGGFVGNTRK*ETPGRADLDLIGAC
Trigger: ACAGGCTCCTATTAAGTCGAGATCTGCCCTCCCAGGGGTCTCCAATTTTCTTGTATTCCCTACAAAGCCTCCTCTGCATGCCAGTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS TCA 72 bp CAAAGACACGCTCCAAAGCCTGCAGCTGGCTGCTATTaGAGGTTGTCCTATTCCTTCGCTGCTTTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: QRHAPKPAAGCY*RLSYSFAAFSS
Trigger: AGAAGAGAAAGCAGCGAAGGAATAGGACAACCTTCAATAGCAGCCAGCTGCAGGCTTTGGAGCGTGTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000239461.11
ENST00000367760.7
ENST00000497230.2
ENST00000553786.1
CDS TCA 72 bp GCCTGTAATTACGTGGCAAAGCCTTTGTGCTGTGCCTaGCGTTTCACAGACCCCCTTTCTCCATCACAATCT +
Preference number: 6 (lower is better)
Translates to: ACNYVAKPLCCA*RFTDPLSPSQS
Trigger: AGATTGTGATGGAGAAAGGGGGTCTGTGAAACGTCAGGCACAGCACAAAGGCTTTGCCACGTAATTACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS GCA 72 bp GAGTTTGCACAGTCACGCGATCCCAGATGTTTCCTGTaGACAGCAATCTCTGAAGAGCCCTGCTCTAGATTA +
Preference number: 6 (lower is better)
Translates to: EFAQSRDPRCFL*TAISEEPCSRL
Trigger: TAATCTAGAGCAGGGCTCTTCAGAGATTGCTGTGCACAGGAAACATCTGGGATCGCGTGACTGTGCAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496573.1
CDS CAA 72 bp TCAAAGACACGCTCCAAAGCCTGCAGCTGGCTGCTATaGAAGGTTGTCCTATTCCTTCGCTGCTTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: SKTRSKACSWLL*KVVLFLRCFLF
Trigger: GAAGAGAAAGCAGCGAAGGAATAGGACAACCTTCAATAGCAGCCAGCTGCAGGCTTTGGAGCGTGTCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000239461.11
ENST00000367760.7
ENST00000497230.2
ENST00000553786.1
CDS CCA 72 bp CTCCTTTTTCCTTCTCAGTTGGATCAAGAAGCTCTCTaGCACTTCAAAAGGCACAAACTGGCATGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: LLFPSQLDQEAL*HFKRHKLACRG
Trigger: TCCTCTGCATGCCAGTTTGTGCCTTTTGAAGTGCCAGAGAGCTTCTTGATCCAACTGAGAAGGAAAAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367760.7
CDS TCA 72 bp CATCTTGGGAGGGACGAGGATCTATTTTTGAAAGTGTaGAAGGGAGAAATAAGCCAAATGCGTTCAGCAGAT +
Preference number: 6 (lower is better)
Translates to: HLGRDEDLFLKV*KGEISQMRSAD
Trigger: ATCTGCTGAACGCATTTGGCTTATTTCTCCCTTTCACACTTTCAAAAATAGATCCTCGTCCCTCCCAAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485529.5
CDS GCA 72 bp AGATGTTTCCTGTGCACAGCAATCTCTGAAGAGCCCTaGTCTAGATTAGTATCACACTATGCTTCATTTAGT +
Preference number: 6 (lower is better)
Translates to: RCFLCTAISEEP*SRLVSHYASFS
Trigger: ACTAAATGAAGCATAGTGTGATACTAATCTAGAGCAGGGCTCTTCAGAGATTGCTGTGCACAGGAAACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496573.1
CDS CAA 72 bp GCTGATTATTTTGCTTCGGCATTAACTCCTCCAGATTaGTTTAAGATCCTGTTGGAAAATCTCATTTGCATG +
Preference number: 6 (lower is better)
Translates to: ADYFASALTPPD*FKILLENLICM
Trigger: CATGCAAATGAGATTTTCCAACAGGATCTTAAACAAATCTGGAGGAGTTAATGCCGAAGCAAAATAATCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553786.1