RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRRT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000163704

Ensembl transcript IDs: ENST00000295984.7, ENST00000411976.2, ENST00000412055.6

Found 469 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCATCGGGCAGGGTCCTaGCCCTGCGTCAGGACCGCT +
Preference number: 2 (lower is better)
Translates to: SRQARLITPRWGVWGTCSHRAGS*PCVRTA
Trigger: AGCGGTCCTGACGCAGGGCCAGGACCCTGCCCGATG...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
3UTR-3UTR GCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCAAGACACGGCCTCTGTaGAAAATGCCGGCTCGGCCT +
Preference number: 2 (lower is better)
Translates to: SRQARLITPRWGVWGTCSKTRPL*KMPARP
Trigger: AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTT...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295984.7
3UTR-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAGTAGGCCATGCCATGTaGGCATCGGGCAGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: PESMHTHPVFRIRHGLCAVGHAM*ASGRVL
Trigger: CAGGACCCTGCCCGATGCCCACATGGCATGGCCTAC...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
3UTR-3UTR GCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAATGTCCCAGTAGGCCATaGCATGTGGGCATCGGGCAG +
Preference number: 2 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKCPSRP*HVGIGQ
Trigger: CTGCCCGATGCCCACATGGCATGGCCTACTGGGACA...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
3UTR-3UTR GCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGTGTCCCAGTAGGCCATaGCATGTGGGCATCGGGCAG +
Preference number: 2 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRCPSRP*HVGIGQ
Trigger: CTGCCCGATGCCCACATGGCATGGCCTACTGGGACA...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
3UTR-3UTR GCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAACTCGGCCTCCCAAAGTaGTGGGATTCCTGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKLGLPK*WDSWRE
Trigger: CTCACGCCAGGAATCCCAGCACTTTGGGAGGCCGAG...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
3UTR-3UTR CCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTAGGCCATGCCATGTaGGCATCGGGCAGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: LAQRGQSRQARLITPRWGVGHAM*ASGRVL
Trigger: CAGGACCCTGCCCGATGCCCACATGGCATGGCCTAC...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
3UTR-3UTR TCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGATCGAGACCAGGAGGCTaGTCTCGAACTCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: LAQRGQSRQARLITPRWGSRPGG*SRTPDL
Trigger: GAGGTCAGGAGTTCGAGATCAGCCTCCTGGTCTCGA...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412055.6
3UTR-3UTR GCA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAATCATGCCCGAATCCATaGACACCCACCCTGTATTCC +
Preference number: 2 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAESCPNP*TPTLYS
Trigger: GGAATACAGGGTGGGTGTGCATGGATTCGGGCATGA...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412055.6
3UTR-3UTR CCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACCATCGGGCAGGGTCCTaGCCCTGCGTCAGGACCGCT +
Preference number: 2 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHHRAGS*PCVRTA
Trigger: AGCGGTCCTGACGCAGGGCCAGGACCCTGCCCGATG...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
3UTR-3UTR GCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGCTCCCTGTTCTTCATaGCCGAATCCATGCACACCC +
Preference number: 2 (lower is better)
Translates to: LAQRGQSRQARLITPRWGAPCSS*PNPCTP
Trigger: GGGTGTGCATGGATTCGGGCATGAAGAACAGGGAGC...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
3UTR-3UTR GCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTCTCGGCCTCCCAAAGTaGTGGGATTCCTGGCGTGAG +
Preference number: 2 (lower is better)
Translates to: ISLAQRGQSRQARLITPRLGLPK*WDSWRE
Trigger: CTCACGCCAGGAATCCCAGCACTTTGGGAGGCCGAG...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
3UTR-3UTR CAA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTGCTGTCCCCCGGGGGTaGCCGTCAGGTAGAGAGGCC +
Preference number: 3 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAAVPRG*PSGREA
Trigger: GGCCTCTCTACCTGACGGCAACCCCCGGGGGACAGC...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000412055.6
3UTR CCA 72 bp TTTAAAGGCTCAACTGTCCCAGTAGGCCATGCCATGTaGGCATCGGGCAGGGTCCTGGCCCTGCGTCAGGAC +
Preference number: 3 (lower is better)
Translates to: FKGSTVPVGHAM*ASGRVLALRQD
Trigger: GTCCTGACGCAGGGCCAGGACCCTGCCCGATGCCCACATGGCATGGCCTACTGGGACAGTTGAGCCTTTAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCGAGCCCCAGGCGCCTaGACTGGGCGTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSRAPGA*TGRGQL
Trigger: CAGCTGGCCACGCCCAGTTCAGGCGCCTGGGGCTCG...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCCCTGCTGGGGCGGCTaGCAGCGCAGCCAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSPCWGG*QRSQRQ
Trigger: TTGGCGCTGGCTGCGCTGGCAGCCGCCCCAGCAGGG...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCGGCTTTGGGATGGCTaGCCCGGCGCGGCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSRLWDG*PGAAAE
Trigger: CTCTGCGGCCGCGCCGGGGCAGCCATCCCAAAGCCG...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCACGAGCCCCAGGCGCCTaGACTGGGCGTGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PVFRIRHGLCAKCRLGLPRAPGA*TGRGQL
Trigger: CAGCTGGCCACGCCCAGTTCAGGCGCCTGGGGCTCG...TGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCGTCGAGCTCGGCTTTaGGATGGCTGCCCCGGCGCG +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSRRARL*DGCPGA
Trigger: CGCGCCGGGGCAGCCATCCCAAAGCCGAGCTCGACG...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp TGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAAAGCACGCGCACGTCGCTaGGCGACCTGCAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: CIPHKTRPLCKMPARPPKARARR*ATCSGR
Trigger: GCGGCCGCTGCAGGTCGCTCAGCGACGTGCGCGTGC...TTTGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR GCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCGGTGCTTCCACTACGTaGTGTGGGACCGGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSGASTT*CGTGPR
Trigger: GCGCGGGCCGGTCCCACAGCACGTAGTGGAAGCACC...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCCCTGGCCGTCCCCCTaGCGAGCGGCGGTAGAATCA +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSPWPSP*RAAVES
Trigger: TGATTCTACCGCCGCTCGGCAGGGGGACGGCCAGGG...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTTCCGGAGGGGGAGGCTaGCCCAGGGCTCGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPASGGGG*PRARCV
Trigger: CACGCAGCGAGCCCTGGGCCAGCCTCCCCCTCCGGA...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCTGGGGCTGAAGCCATaGAGCTGGCGGTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSLGLKP*SWRWAP
Trigger: CGGAGCCCACCGCCAGCTCCATGGCTTCAGCCCCAG...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTTGCAGTGGCGTTGGCTaGGGGGCTGGAGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PPCIPHKTRPLCKMPARPCSGVG*GAGGWG
Trigger: GCCCCAGCCTCCAGCCCCCCAGCCAACGCCACTGCA...AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp CCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAAGCAAGCGTGCTCCGTaGGCGGCCTGGGTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: PVFRIRHGLCAKCRLGLPSKRAP*AAWVSR
Trigger: CCGCGAGACCCAGGCCGCCCACGGAGCACGCTTGCT...TGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAGCTCGGCTTTGGGATaGCTGCCCCGGCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCASSALG*LPRRGR
Trigger: GCGGCCGCGCCGGGGCAGCCATCCCAAAGCCGAGCT...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCAAAGGCCTGGGGCTCTaGGCCCACAGAGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSKGLGL*AHRALG
Trigger: CCCAAGGGCTCTGTGGGCTCAGAGCCCCAGGCCTTT...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTGCTGGAGGCTGGGGCTaGAGCCATGGAGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: PPCIPHKTRPLCKMPARPAGGWG*SHGAGG
Trigger: ACCGCCAGCTCCATGGCTTCAGCCCCAGCCTCCAGC...AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR TCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCACACCTCGCTCTTTCCTaGCGGCGCCGGGCACGCCAG +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCAHLALS*RRRARQ
Trigger: CTGGCGTGCCCGGCGCCGTCAGGAAAGAGCGAGGTG...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAGCACGCGCACGTCGCTaGGCGACCTGCAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKARARR*ATCSGR
Trigger: GCGGCCGCTGCAGGTCGCTCAGCGACGTGCGCGTGC...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCTCGGCTTCATCTGGCTaGAGGGCCCCCATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSSASSG*RAPMGL
Trigger: GAGCCCCATGGGGGCCCTGCAGCCAGATGAAGCCGA...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAAACACCGCGGCCACCAATaGCAGCCGGGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CIPHKTRPLCKMPARPPKHRGHQ*QPGPCW
Trigger: CCAGCAGGGCCCCGGCTGGCATTGGTGGCCGCGGTG...TTTGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR GCA 90 bp TGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAAAGGCACAGGCAGAGCGTaGCCAGAGCCACGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: CIPHKTRPLCKMPARPPKGTGRA*PEPRPR
Trigger: GCGCGGCCGTGGCTCTGGGCACGCTCTGCCTGTGCC...TTTGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR GCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCTGTCTCGCACTAGGTaGTCGCGGAAGAGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSLSRTR*SRKSAA
Trigger: CGCCGCGCTCTTCCGCGAGCACCTAGTGCGAGACAG...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAGGGCCCGTACAGGGCTaGGCCAAGGGGAGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: PVFRIRHGLCAKCRLGLPGPVQG*AKGRGY
Trigger: GTAGCCTCTCCCCTTGGCCCAGCCCTGTACGGGCCC...TGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCATGCAGTGGCGTTGGCTaGGGGGCTGGAGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCACSGVG*GAGGWG
Trigger: GCCCCAGCCTCCAGCCCCCCAGCCAACGCCACTGCA...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCAGCTCGCTCAGCGATaGCGCCGGTCCCACACCGTT +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSQLAQR*RRSHTV
Trigger: AACGGTGTGGGACCGGCGCCATCGCTGAGCGAGCTG...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAGGGGACCTGGGGAGCTaGCTTCCCAGGACACCTCAG +
Preference number: 4 (lower is better)
Translates to: PVFRIRHGLCAKCRLGLPGDLGS*LPRTPQ
Trigger: CTGAGGTGTCCTGGGAAGTCAGCTCCCCAGGTCCCC...TGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR GCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCGGGGCTGCTGGATCCTaGTGGGTGAAGTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSGAAGS*WVKWGP
Trigger: AGGTCCCCACTTCACCCAGCAGGATCCAGCAGCCCC...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCCTGCTGGGGCGGCTaGCAGCGCAGCCAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRPCWGG*QRSQRQ
Trigger: TTGGCGCTGGCTGCGCTGGCAGCCGCCCCAGCAGGG...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGGGCACAGGCAGAGCGTaGCCAGAGCCACGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRGTGRA*PEPRPR
Trigger: GCGCGGCCGTGGCTCTGGGCACGCTCTGCCTGTGCC...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCAGCCCACAGAGCCCTTaGGGTGGGCTCCAGGGATCA +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSSPQSP*GGLQGS
Trigger: TGATCCCTGGAGCCCACCCCAAGGGCTCTGTGGGCT...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTGGGCCCGTACAGGGCTaGGCCAAGGGGAGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAGPVQG*AKGRGY
Trigger: GTAGCCTCTCCCCTTGGCCCAGCCCTGTACGGGCCC...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCGTGTGGGGTGGGCCCTaGTGGTCTGAGGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSVWGGP*WSEGEV
Trigger: CACTTCTCCCTCAGACCACCAGGGCCCACCCCACAC...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTGAAGGTCAGCCTGCTTaGGCGGGGGACCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAEGQPA*AGDLGS
Trigger: GCTCCCCAGGTCCCCCGCCCAAGCAGGCTGACCTTC...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAAAGCAAGCGTGCTCCGTaGGCGGCCTGGGTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAESKRAP*AAWVSR
Trigger: CCGCGAGACCCAGGCCGCCCACGGAGCACGCTTGCT...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR CCA 90 bp TGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAAACCCAGGCGCCTGAACTaGGCGTGGCCAGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: CIPHKTRPLCKMPARPPKPRRLN*AWPAAH
Trigger: GTGGGCAGCTGGCCACGCCCAGTTCAGGCGCCTGGG...TTTGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp CCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCAGCTCGCTCAGCGATaGCGCCGGTCCCACACCGTT +
Preference number: 4 (lower is better)
Translates to: PPCIPHKTRPLCKMPARPQLAQR*RRSHTV
Trigger: AACGGTGTGGGACCGGCGCCATCGCTGAGCGAGCTG...AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCGGAGGCCGCAGCGCTaGAACACACTGTCTCGCACT +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSRRPQR*NTLSRT
Trigger: AGTGCGAGACAGTGTGTTCCAGCGCTGCGGCCTCCG...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCAGCTCGGCTTTGGGATaGCTGCCCCGGCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGSSALG*LPRRGR
Trigger: GCGGCCGCGCCGGGGCAGCCATCCCAAAGCCGAGCT...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAAACGTCGAGCTCGGCTTTaGGATGGCTGCCCCGGCGCG +
Preference number: 4 (lower is better)
Translates to: CIPHKTRPLCKMPARPPKRRARL*DGCPGA
Trigger: CGCGCCGGGGCAGCCATCCCAAAGCCGAGCTCGACG...TTTGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCATTCCACTACGTGCTGTaGGACCGGCCCGCGCACGCG +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCAFHYVL*DRPAHA
Trigger: CGCGTGCGCGGGCCGGTCCCACAGCACGTAGTGGAA...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCGGCTTGCCGCGCGGCTaGACCTCTCCCTGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGGLPRG*TSPWPS
Trigger: GGACGGCCAGGGAGAGGTCCAGCCGCGCGGCAAGCC...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCATCGGGCAGGGTCCTaGCCCTGCGTCAGGACCGCT +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAHRAGS*PCVRTA
Trigger: AGCGGTCCTGACGCAGGGCCAGGACCCTGCCCGATG...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTGGGGACCTGGGGAGCTaGCTTCCCAGGACACCTCAG +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAGDLGS*LPRTPQ
Trigger: CTGAGGTGTCCTGGGAAGTCAGCTCCCCAGGTCCCC...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCACTGAGGGACCAGGGATaGGAGACTTGGGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PVFRIRHGLCAKCRLGLPLRDQG*ETWGCL
Trigger: CAGGCACCCCCAAGTCTCTCATCCCTGGTCCCTCAG...TGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR TCA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCAATGAGGCCCCGGCGTaGCGTCGAGGGGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGNEAPA*RRGGLD
Trigger: GTCCAGGCCCCCTCGACGTCACGCCGGGGCCTCATT...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCATGCACCAGCGCCACTaGTCCCAGCAGGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSMHQRH*SQQEWV
Trigger: AACCCACTCCTGCTGGGAGCAGTGGCGCTGGTGCAT...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAACTGGGCGTGGCCAGCTaGCCACTCTCCGCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKLGVAS*PLSAGL
Trigger: CAACCCGGCGGAGAGTGGGCAGCTGGCCACGCCCAG...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCTGGGCGTGGCCAGCTaGCCACTCTCCGCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRLGVAS*PLSAGL
Trigger: CAACCCGGCGGAGAGTGGGCAGCTGGCCACGCCCAG...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCGGTCCCACACCGTTaGGGGACAGTCCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRPVPHR*GTVPGH
Trigger: GTGGCCCGGGACTGTCCCGCAACGGTGTGGGACCGG...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCATGGGGTGGGCCCTGGTaGTCTGAGGGAGAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: PVFRIRHGLCAKCRLGLPWGGPW*SEGEVG
Trigger: ACCCACTTCTCCCTCAGACCACCAGGGCCCACCCCA...TGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp CCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTAGACTTGGGGGTGCCTaGGGCCTCCACAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PPCIPHKTRPLCKMPARPRLGGA*GLHSSS
Trigger: AGAGGAGCTGTGGAGGCCCCAGGCACCCCCAAGTCT...AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAATGGGTTTTGCAGCGGTaGCGGCAGCCCCGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKWVLQR*RQPRAQ
Trigger: CTGGGCGCGGGGCTGCCGCCACCGCTGCAAAACCCA...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTAGGCGCAGCCAGAAGTaGACACCCCACCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPARRSQK*TPHQAH
Trigger: GTGGGCCTGGTGGGGTGTCCACTTCTGGCTGCGCCT...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAACGCCTGAACTGGGCGTaGCCAGCTGCCCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAERLNWA*PAAHSP
Trigger: CGGAGAGTGGGCAGCTGGCCACGCCCAGTTCAGGCG...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR CCA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCCCAGGCGCCTGAACTaGGCGTGGCCAGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGPRRLN*AWPAAH
Trigger: GTGGGCAGCTGGCCACGCCCAGTTCAGGCGCCTGGG...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGGCTGGAGGCTGGGGCTaGAGCCATGGAGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRAGGWG*SHGAGG
Trigger: ACCGCCAGCTCCATGGCTTCAGCCCCAGCCTCCAGC...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCCTGCGTCAGGAGGTTaGGCACAGACCATGTGGACA +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSPASGG*AQTMWT
Trigger: TGTCCACATGGTCTGTGCTCAACCTCCTGACGCAGG...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTGATGTCCAAGCTGCCTaGACCAACGTTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PPCIPHKTRPLCKMPARPDVQAA*TNVAGP
Trigger: GGGCCCAGCAACGTTGGTGCAGGCAGCTTGGACATC...AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR GCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGAGAAGCCGCAGCGGCTaGCCCGTCGGGTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRRSRSG*PVGCFH
Trigger: GTGGAAGCACCCGACGGGGCAGCCGCTGCGGCTTCT...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCCTGGCCGTCCCCCTaGCGAGCGGCGGTAGAATCA +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRPWPSP*RAAVES
Trigger: TGATTCTACCGCCGCTCGGCAGGGGGACGGCCAGGG...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTTGTCCCAGTAGGCCATaGCATGTGGGCATCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPCIPHKTRPLCKMPARPCPSRP*HVGIGQ
Trigger: CTGCCCGATGCCCACATGGCATGGCCTACTGGGACA...AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR GCA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAACTGTCCCCCGGGGGTTaGCGTCAGGTAGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAELSPGG*RQVERP
Trigger: AGGCCTCTCTACCTGACGGCAACCCCCGGGGGACAG...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCACACAGCCCCATGGGCTaGAGGCCATGGTCTACTCCG +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCAHSPMG*RPWSTP
Trigger: CGGAGTAGACCATGGCCTCCAGCCCATGGGGCTGTG...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCACAGCCCCATGGGCTaGAGGCCATGGTCTACTCCG +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAHSPMG*RPWSTP
Trigger: CGGAGTAGACCATGGCCTCCAGCCCATGGGGCTGTG...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAGCCCACAGAGCCCTTaGGGTGGGCTCCAGGGATCA +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCASPQSP*GGLQGS
Trigger: TGATCCCTGGAGCCCACCCCAAGGGCTCTGTGGGCT...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAATGAGGGTGGCCCACTaGGTGGGGAGCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCAMRVAH*VGSHCF
Trigger: GAAGCAGTGGCTCCCCACCCAGTGGGCCACCCTCAT...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCATGGGGTGGGCCCTGGTaGTCTGAGGGAGAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCAWGGPW*SEGEVG
Trigger: ACCCACTTCTCCCTCAGACCACCAGGGCCCACCCCA...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAGTGTGGGGTGGGCCCTaGTGGTCTGAGGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCAVWGGP*WSEGEV
Trigger: CACTTCTCCCTCAGACCACCAGGGCCCACCCCACAC...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTAGGCGGGTGGATCCGTaGGCTGGGGTCCTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPARRVDP*AGVLVN
Trigger: ATTCACCAGGACCCCAGCCCACGGATCCACCCGCCT...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAACTCCTCGGCTTCATCTaGCTGCAGGGCCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAELLGFI*LQGPHG
Trigger: CCCATGGGGGCCCTGCAGCCAGATGAAGCCGAGGAG...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR CCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCTGGGGCTGAAGCCATaGAGCTGGCGGTGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRLGLKP*SWRWAP
Trigger: CGGAGCCCACCGCCAGCTCCATGGCTTCAGCCCCAG...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCACTCATCACTCCACGTTaGGGAGTCTGGGGCACCTGC +
Preference number: 4 (lower is better)
Translates to: PVFRIRHGLCAKCRLGLPLITPR*GVWGTC
Trigger: GCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAG...TGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR TCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGAAAGGCCTGGGGCTCTaGGCCCACAGAGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRKGLGL*AHRALG
Trigger: CCCAAGGGCTCTGTGGGCTCAGAGCCCCAGGCCTTT...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCGAACTGTGGCTACCCTaGGTTGACGTCTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSELWLP*VDVWEL
Trigger: CAACTCCCAGACGTCAACTCAGGGTAGCCACAGTTC...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCCGATCAGGAGCCTCTaGGGCGGGTGGATCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSPIRSL*GGWIRG
Trigger: CCCACGGATCCACCCGCCTCAGAGGCTCCTGATCGG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCCCCCGTGTTCACCTTaGGCGCGTCCCTGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSPPCSP*ARPCSR
Trigger: TCGGCTGCAGGGACGCGCGCAAGGTGAACACGGGGG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp CCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCATGGTCTACTCCGATaGCTGGGCCTAAAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PPCIPHKTRPLCKMPARPHGLLR*LGLKPP
Trigger: TGGGGGCTTTAGGCCCAGGCATCGGAGTAGACCATG...AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR GCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCTCTCTGAGCTCCTTGTaGTGCTTTGGGCCCGTACAG +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSSLSSL*CFGPVQ
Trigger: CTGTACGGGCCCAAAGCAGCACAAGGAGCTCAGAGA...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCGGGGGAGATGGGGTCTaGTCCATTCATTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSGGDGV*SIHCCS
Trigger: AGAGCAGCAATGAATGGAGCAGACCCCATCTCCCCC...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGTCGGCTTCATCTGGCTaGAGGGCCCCCATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRSASSG*RAPMGL
Trigger: GAGCCCCATGGGGGCCCTGCAGCCAGATGAAGCCGA...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAATGGCCCAGGGCTCGCTaGGTGGTGACTCGAATGAGG +
Preference number: 4 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAEWPRAR*VVTRMR
Trigger: CCTCATTCGAGTCACCACGCAGCGAGCCCTGGGCCA...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR GCA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCAGCAGGAGTGGGTTTTaGAGCGGTGGCGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGSRSGF*SGGGSP
Trigger: GGGGCTGCCGCCACCGCTGCAAAACCCACTCCTGCT...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAATTAGCCCAGCAAGCGTaGTCCGTGGGCGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKLAQQA*SVGGLG
Trigger: ACCCAGGCCGCCCACGGAGCACGCTTGCTGGGCTAA...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTTGCCTGCACCAACGTTaGTGGGCCCTGCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: PPCIPHKTRPLCKMPARPCLHQR*WALHSS
Trigger: ACTGCTATGCAGGGCCCAGCAACGTTGGTGCAGGCA...AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR GCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGGGCTGCCCCGTCGGGTaGTTCCACTACGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRGCPVG*FHYVLW
Trigger: CCACAGCACGTAGTGGAAGCACCCGACGGGGCAGCC...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAAGAAGCCGCAGCGGCTaGCCCGTCGGGTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGRSRSG*PVGCFH
Trigger: GTGGAAGCACCCGACGGGGCAGCCGCTGCGGCTTCT...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGGGATTCCCCAGGCTTaGCGCGCGGCTGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGGIPQA*RAAGPL
Trigger: GAGAGGTCCAGCCGCGCGGCAAGCCTGGGGAATCCC...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAAAGCAGGGTCCTGGCCCTaGGTCAGGACCGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: CIPHKTRPLCKMPARPPKAGSWP*VRTALQ
Trigger: TTGAAGAGCGGTCCTGACGCAGGGCCAGGACCCTGC...TTTGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAATGGGCTGGAGGCCATaGTCTACTCCGATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCAMGWRP*STPMPG
Trigger: CCCAGGCATCGGAGTAGACCATGGCCTCCAGCCCAT...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCACATACACAGCCCCATaGGCTGGAGGCCATGGTCTA +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSTYTAP*AGGHGL
Trigger: TAGACCATGGCCTCCAGCCCATGGGGCTGTGTATGT...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCTTCGGAGTTTTCAAGTaGCCTGGGAAAGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSFGVFK*PGKAPP
Trigger: GGGAGGGGCTTTCCCAGGCCACTTGAAAACTCCGAA...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAACAGAGCCCTTGGGGTaGGCTCCAGGGATCATAGGG +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCATEPLG*APGIIG
Trigger: CCCTATGATCCCTGGAGCCCACCCCAAGGGCTCTGT...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGGGCCCGTACAGGGCTaGGCCAAGGGGAGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSGPVQG*AKGRGY
Trigger: GTAGCCTCTCCCCTTGGCCCAGCCCTGTACGGGCCC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCGGGTGGCCCACTGGGTaGGGAGCCACTGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGGWPTG*GATASC
Trigger: GCAAGAAGCAGTGGCTCCCCACCCAGTGGGCCACCC...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAAATGAGGGTGGCCCACTaGGTGGGGAGCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAEMRVAH*VGSHCF
Trigger: GAAGCAGTGGCTCCCCACCCAGTGGGCCACCCTCAT...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAGGCCACTGTCCCTCTTaGCCTTCATGCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCAGHCPS*PSCCRE
Trigger: CTCCCTGCAGCATGAAGGCCAAGAGGGACAGTGGCC...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCATGGGAAACAAGGGTGTaGGGTGGGCCCTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCAWETRV*GGPWWS
Trigger: AGACCACCAGGGCCCACCCCACACCCTTGTTTCCCA...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCGGCCAATGCCAAGTCTaGCTGGGCCCCTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGGQCQV*LGPWLL
Trigger: CAGGAGCCAGGGGCCCAGCCAGACTTGGCATTGGCC...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGGGCCAATGCCAAGTCTaGCTGGGCCCCTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRGQCQV*LGPWLL
Trigger: CAGGAGCCAGGGGCCCAGCCAGACTTGGCATTGGCC...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGAAGGTCAGCCTGCTTaGGCGGGGGACCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSEGQPA*AGDLGS
Trigger: GCTCCCCAGGTCCCCCGCCCAAGCAGGCTGACCTTC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCATTGCTGCTCTCTCTaGCTTAGACGGCCGATCAGG +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSHCCSL*LRRPIR
Trigger: CCTGATCGGCCGTCTAAGCCAGAGAGAGCAGCAATG...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAACTCCTCGGCTTCATCTaGCTGCAGGGCCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKLLGFI*LQGPHG
Trigger: CCCATGGGGGCCCTGCAGCCAGATGAAGCCGAGGAG...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAAGGCGCAGCCAGAAGTaGACACCCCACCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKRRSQK*TPHQAH
Trigger: GTGGGCCTGGTGGGGTGTCCACTTCTGGCTGCGCCT...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCTGCATAGCAGTTATTaGGTCGCTCCGGCACCTCGC +
Preference number: 4 (lower is better)
Translates to: PPCIPHKTRPLCKMPARPLHSSY*VAPAPR
Trigger: GCGAGGTGCCGGAGCGACCCAATAACTGCTATGCAG...AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTGCTCGATGGTATCACTaGAGGCGCTGCGGGATTCCC +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAARWYH*RRCGIP
Trigger: GGGAATCCCGCAGCGCCTCCAGTGATACCATCGAGC...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAAAGTAGGCCATGCCATGTaGGCATCGGGCAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CIPHKTRPLCKMPARPPKVGHAM*ASGRVL
Trigger: CAGGACCCTGCCCGATGCCCACATGGCATGGCCTAC...TTTGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR TCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCAAAGGCCTGGGGCTCTaGGCCCACAGAGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSKGLGL*AHRALG
Trigger: CCCAAGGGCTCTGTGGGCTCAGAGCCCCAGGCCTTT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR TCA 90 bp CCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTTGGGAGCTTGGTCCTTaGGCCATCTGGAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: PPCIPHKTRPLCKMPARPWELGP*AIWRSS
Trigger: TGATGACCTCCAGATGGCTCAAGGACCAAGCTCCCA...AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR TCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGGGGACCTGGGGAGCTaGCTTCCCAGGACACCTCAG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSGDLGS*LPRTPQ
Trigger: CTGAGGTGTCCTGGGAAGTCAGCTCCCCAGGTCCCC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR TCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCTGAGGGACCAGGGATaGGAGACTTGGGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRLRDQG*ETWGCL
Trigger: CAGGCACCCCCAAGTCTCTCATCCCTGGTCCCTCAG...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCGCCACTGCTTCTTGCTaGAGAAGCTCTTGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSATASC*RSSCES
Trigger: GGACTCACAAGAGCTTCTGCAGCAAGAAGCAGTGGC...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCGGGGCTGCTGGATCCTaGTGGGTGAAGTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGGAAGS*WVKWGP
Trigger: AGGTCCCCACTTCACCCAGCAGGATCCAGCAGCCCC...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTGCCAACATCAGGGGCTaGTGGATCCTGCTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAANIRG*WILLGE
Trigger: TTCACCCAGCAGGATCCAGCAGCCCCTGATGTTGGC...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAGGGGGAGATGGGGTCTaGTCCATTCATTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PVFRIRHGLCAKCRLGLPGGDGV*SIHCCS
Trigger: AGAGCAGCAATGAATGGAGCAGACCCCATCTCCCCC...TGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR GCA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAAGAGCAGAGTCAGGGCTaGCAGCGCCGTAAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAEEQSQG*QRRKQQ
Trigger: TTGCTGCTTACGGCGCTGGCAGCCCTGACTCTGCTC...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR GCA 90 bp TGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAAAAGCAACCCTACACCATaGACCAGCGCCACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: CIPHKTRPLCKMPARPPKSNPTP*TSATAP
Trigger: GGGAGCAGTGGCGCTGGTGCATGGTGTAGGGTTGCT...TTTGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR GCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGACTGTCTCGCACTAGGTaGTCGCGGAAGAGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGLSRTR*SRKSAA
Trigger: CGCCGCGCTCTTCCGCGAGCACCTAGTGCGAGACAG...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTAAGACACGGCCTCTGTaGAAAATGCCGGCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAKTRPL*KMPARP
Trigger: AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTT...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR GCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCATGCTCTCACCTGGCTaGAGGGCCCCCATGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSMLSPG*RAPMGL
Trigger: GAGCCCCATGGGGGCCCTGCAGCCAGGTGAGAGCAT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTTCCAGTCCTCACTaGATGAGCCTGCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRPSSPH*MSLRAA
Trigger: TGCGGCGCGCAGGCTCATCCAGTGAGGACTGGAAGG...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAACACGTCAAAGGCCTaGGGCTCTGAGCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCANTSKA*GSEPTE
Trigger: CTCTGTGGGCTCAGAGCCCCAGGCCTTTGACGTGTT...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTAACACGTCAAAGGCCTaGGGCTCTGAGCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPANTSKA*GSEPTE
Trigger: CTCTGTGGGCTCAGAGCCCCAGGCCTTTGACGTGTT...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCCTTGTGCTGCTTTaGGCCCGTACAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGLLVLL*ARTGLG
Trigger: GCCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAG...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGGGTGGCCCACTGGGTaGGGAGCCACTGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSGWPTG*GATASC
Trigger: GCAAGAAGCAGTGGCTCCCCACCCAGTGGGCCACCC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGGCCAATGCCAAGTCTaGCTGGGCCCCTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSGQCQV*LGPWLL
Trigger: CAGGAGCCAGGGGCCCAGCCAGACTTGGCATTGGCC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTGGTGGATCCGTGGGCTaGGGTCCTGGTGAATCCTTA +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAGGSVG*GPGESL
Trigger: TAAGGATTCACCAGGACCCCAGCCCACGGATCCACC...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCAGGTTGATGGGCGATaGCGGCCGCAGATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRQVDGR*RPQIQL
Trigger: GAGCTGGATCTGCGGCCGCCATCGCCCATCAACCTG...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCGGAGGCCGCAGCGCTaGAACACACTGTCTCGCACT +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRRRPQR*NTLSRT
Trigger: AGTGCGAGACAGTGTGTTCCAGCGCTGCGGCCTCCG...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCTCTTCAAAGCTCGATaGTATCACTGGAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SRQARLITPRWGVWGTCSLFKAR*YHWRRC
Trigger: GCAGCGCCTCCAGTGATACCATCGAGCTTTGAAGAG...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCGGGATGAAAGTGAGATaGGGGTGGCCCACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGGMKVR*GWPTGW
Trigger: CCACCCAGTGGGCCACCCTCATCTCACTTTCATCCC...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCAGCACTGGCCTCTTaGCAGTACCTGAGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAPALAS*QYLSGK
Trigger: TTTCCCACTCAGGTACTGTCAAGAGGCCAGTGCTGG...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCAACTGGGGGTACTaGGCCAACATCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGLNWGY*ANIRGC
Trigger: GCAGCCCCTGATGTTGGCTCAGTACCCCCAGTTGAG...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAACTCAACTGGGGGTACTaGGCCAACATCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKLNWGY*ANIRGC
Trigger: GCAGCCCCTGATGTTGGCTCAGTACCCCCAGTTGAG...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCTGAGGGACCAGGGATaGGAGACTTGGGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSLRDQG*ETWGCL
Trigger: CAGGCACCCCCAAGTCTCTCATCCCTGGTCCCTCAG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR TCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTAATGAGGCCCCGGCGTaGCGTCGAGGGGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPRNEAPA*RRGGLD
Trigger: GTCCAGGCCCCCTCGACGTCACGCCGGGGCCTCATT...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGGGGCTGCTGGATCCTaGTGGGTGAAGTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSGAAGS*WVKWGP
Trigger: AGGTCCCCACTTCACCCAGCAGGATCCAGCAGCCCC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAAAGGCTTCTGGCCAATaGCAAGTCTGGCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKKASGQ*QVWLGP
Trigger: GGGGCCCAGCCAGACTTGGCATTGGCCAGAAGCCTT...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACCACCGCGGCCACCAATaGCAGCCGGGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHHRGHQ*QPGPCW
Trigger: CCAGCAGGGCCCCGGCTGGCATTGGTGGCCGCGGTG...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAGAGCAGAGTCAGGGCTaGCAGCGCCGTAAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKEQSQG*QRRKQQ
Trigger: TTGCTGCTTACGGCGCTGGCAGCCCTGACTCTGCTC...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAAACGTTGCTGGGCCCTaGATAGCAGTTATTGGGTCG +
Preference number: 4 (lower is better)
Translates to: PVFRIRHGLCAKCRLGLPNVAGP*IAVIGS
Trigger: CGACCCAATAACTGCTATGCAGGGCCCAGCAACGTT...TGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR GCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACCGGCTTTGGGATGGCTaGCCCGGCGCGGCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHRLWDG*PGAAAE
Trigger: CTCTGCGGCCGCGCCGGGGCAGCCATCCCAAAGCCG...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGTATCACTGGAGGCGCTaGGGGATTCCCCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRYHWRR*GIPQAC
Trigger: GCAAGCCTGGGGAATCCCGCAGCGCCTCCAGTGATA...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGCAGGGTCCTGGCCCTaGGTCAGGACCGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGAGSWP*VRTALQ
Trigger: TTGAAGAGCGGTCCTGACGCAGGGCCAGGACCCTGC...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTTCATGCCCGAATCCATaGACACCCACCCTGTATTCC +
Preference number: 4 (lower is better)
Translates to: PPCIPHKTRPLCKMPARPSCPNP*TPTLYS
Trigger: GGAATACAGGGTGGGTGTGCATGGATTCGGGCATGA...AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCCTTCCAGTCCTCACTaGATGAGCCTGCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSPSSPH*MSLRAA
Trigger: TGCGGCGCGCAGGCTCATCCAGTGAGGACTGGAAGG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCACAGCCCCATGGGCTaGAGGCCATGGTCTACTCCG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSHSPMG*RPWSTP
Trigger: CGGAGTAGACCATGGCCTCCAGCCCATGGGGCTGTG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTACATACACAGCCCCATaGGCTGGAGGCCATGGTCTA +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPATYTAP*AGGHGL
Trigger: TAGACCATGGCCTCCAGCCCATGGGGCTGTGTATGT...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTTTCGGAGTTTTCAAGTaGCCTGGGAAAGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAFGVFK*PGKAPP
Trigger: GGGAGGGGCTTTCCCAGGCCACTTGAAAACTCCGAA...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCAGCCCACAGAGCCCTTaGGGTGGGCTCCAGGGATCA +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSSPQSP*GGLQGS
Trigger: TGATCCCTGGAGCCCACCCCAAGGGCTCTGTGGGCT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCTCCTTGTGCTGCTTTaGGCCCGTACAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSLLVLL*ARTGLG
Trigger: GCCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAACCAGCCGTGGGAGCTTaGTCCTTGAGCCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKPAVGA*SLSHLE
Trigger: CTCCAGATGGCTCAAGGACCAAGCTCCCACGGCTGG...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCATGAGGGTGGCCCACTaGGTGGGGAGCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSMRVAH*VGSHCF
Trigger: GAAGCAGTGGCTCCCCACCCAGTGGGCCACCCTCAT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp TGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAAAACCCTCATCTCTAGGTaGCCACTGTCCCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: CIPHKTRPLCKMPARPPKTLISR*PLSLLA
Trigger: GGCCAAGAGGGACAGTGGCCACCTAGAGATGAGGGT...TTTGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTGGGGTGGGCCCTGGTaGTCTGAGGGAGAAGTGGGT +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSWGGPW*SEGEVG
Trigger: ACCCACTTCTCCCTCAGACCACCAGGGCCCACCCCA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGTGTGGGGTGGGCCCTaGTGGTCTGAGGGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSVWGGP*WSEGEV
Trigger: CACTTCTCCCTCAGACCACCAGGGCCCACCCCACAC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCAGGCGGGTGGATCCGTaGGCTGGGGTCCTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSRRVDP*AGVLVN
Trigger: ATTCACCAGGACCCCAGCCCACGGATCCACCCGCCT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCATTGCTGCTCTCTCTaGCTTAGACGGCCGATCAGG +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAHCCSL*LRRPIR
Trigger: CCTGATCGGCCGTCTAAGCCAGAGAGAGCAGCAATG...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCAGACTTGGGGGTGCCTaGGGCCTCCACAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSRLGGA*GLHSSS
Trigger: AGAGGAGCTGTGGAGGCCCCAGGCACCCCCAAGTCT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCCGGAGGGGGAGGCTaGCCCAGGGCTCGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSSGGGG*PRARCV
Trigger: CACGCAGCGAGCCCTGGGCCAGCCTCCCCCTCCGGA...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCACTGCACCAACGTTGCTaGGCCCTGCATAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: PVFRIRHGLCAKCRLGLPLHQRC*ALHSSY
Trigger: ATAACTGCTATGCAGGGCCCAGCAACGTTGGTGCAG...TGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAGTAGCTGTACCGTGCTaGGCAACTCATCTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PESMHTHPVFRIRHGLCAVAVPC*ATHLGA
Trigger: TGCCCCTAGATGAGTTGCCCAGCACGGTACAGCTAC...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGGCTTGCCGCGCGGCTaGACCTCTCCCTGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHGLPRG*TSPWPS
Trigger: GGACGGCCAGGGAGAGGTCCAGCCGCGCGGCAAGCC...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCTCATCACTCCACGTTaGGGAGTCTGGGGCACCTGC +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRLITPR*GVWGTC
Trigger: GCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAG...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGGGATGAAAGTGAGATaGGGGTGGCCCACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSGMKVR*GWPTGW
Trigger: CCACCCAGTGGGCCACCCTCATCTCACTTTCATCCC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR TCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGTGGCTACCCTGAGTTaGCGTCTGGGAGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSVATLS*RLGVVG
Trigger: CCCCACAACTCCCAGACGTCAACTCAGGGTAGCCAC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR TCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTGGCTACCCTGAGTTaGCGTCTGGGAGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGVATLS*RLGVVG
Trigger: CCCCACAACTCCCAGACGTCAACTCAGGGTAGCCAC...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCTCAACTGGGGGTACTaGGCCAACATCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSLNWGY*ANIRGC
Trigger: GCAGCCCCTGATGTTGGCTCAGTACCCCCAGTTGAG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR TCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGCTGCGGCTCAGGTTaGTGGGCGATGGCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPRCCGSG*WAMAAA
Trigger: TGCGGCCGCCATCGCCCATCAACCTGAGCCGCAGCA...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCAACTGATCTTGAGTaGACCCCTGGAGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAPTDLE*TPGEAV
Trigger: GACAGCTTCTCCAGGGGTTCACTCAAGATCAGTTGG...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAATCGAGACCAGGAGGCTaGTCTCGAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKSRPGG*SRTPDL
Trigger: GAGGTCAGGAGTTCGAGATCAGCCTCCTGGTCTCGA...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR GCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCTGAGCTCCTTGTGCTaGTTTGGGCCCGTACAGGGC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSLSSLC*FGPVQG
Trigger: GCCCTGTACGGGCCCAAAGCAGCACAAGGAGCTCAG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTGGAGCCACTGCTTCTTaGTGCAGAAGCTCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAGATAS*CRSSCE
Trigger: CTCACAAGAGCTTCTGCAGCAAGAAGCAGTGGCTCC...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAGTGGGGACCTTGAGCTaGCTCCTGCAAGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKVGTLS*LLQVFL
Trigger: GAGGAACACTTGCAGGAGGCAGCTCAAGGTCCCCAC...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCAAGGCTTCTGGCCAATaGCAAGTCTGGCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSKASGQ*QVWLGP
Trigger: GGGGCCCAGCCAGACTTGGCATTGGCCAGAAGCCTT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAAAGGCTTCTGGCCAATaGCAAGTCTGGCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGKASGQ*QVWLGP
Trigger: GGGGCCCAGCCAGACTTGGCATTGGCCAGAAGCCTT...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTTGCTCCATTCATTGCTaGTCTCTCTGGCTTAGACGG +
Preference number: 4 (lower is better)
Translates to: PPCIPHKTRPLCKMPARPCSIHC*SLWLRR
Trigger: CCGTCTAAGCCAGAGAGAGCAGCAATGAATGGAGCA...AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR GCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAATGCACCAGCGCCACTaGTCCCAGCAGGAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGMHQRH*SQQEWV
Trigger: AACCCACTCCTGCTGGGAGCAGTGGCGCTGGTGCAT...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAATGCCTGCACCAACGTTaGTGGGCCCTGCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKCLHQR*WALHSS
Trigger: ACTGCTATGCAGGGCCCAGCAACGTTGGTGCAGGCA...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCACCGGTCCCACACCGTTaGGGGACAGTCCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSPVPHR*GTVPGH
Trigger: GTGGCCCGGGACTGTCCCGCAACGGTGTGGGACCGG...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGACTCGGCCTCCCAAAGTaGTGGGATTCCTGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGLGLPK*WDSWRE
Trigger: CTCACGCCAGGAATCCCAGCACTTTGGGAGGCCGAG...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCATGGGCTGGAGGCCATaGTCTACTCCGATGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSMGWRP*STPMPG
Trigger: CCCAGGCATCGGAGTAGACCATGGCCTCCAGCCCAT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCACAGAGCCCTTGGGGTaGGCTCCAGGGATCATAGGG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSTEPLG*APGIIG
Trigger: CCCTATGATCCCTGGAGCCCACCCCAAGGGCTCTGT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCTCTTCAGCAGGGGCGTaGCGGACATCAGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGSSAGA*RTSEFL
Trigger: CAGGAACTCTGATGTCCGCCACGCCCCTGCTGAAGA...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAGAGGTCATCAGTTACTaGGAGTCGTTCTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PVFRIRHGLCAKCRLGLPEVISY*ESFSLS
Trigger: GCTCAGAGAGAACGACTCCCAGTAACTGATGACCTC...TGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCCAGCCGTGGGAGCTTaGTCCTTGAGCCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSPAVGA*SLSHLE
Trigger: CTCCAGATGGCTCAAGGACCAAGCTCCCACGGCTGG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGGCCACTGTCCCTCTTaGCCTTCATGCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSGHCPS*PSCCRE
Trigger: CTCCCTGCAGCATGAAGGCCAAGAGGGACAGTGGCC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGATGGGAAACAAGGGTGTaGGGTGGGCCCTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGWETRV*GGPWWS
Trigger: AGACCACCAGGGCCCACCCCACACCCTTGTTTCCCA...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTGGGAAACAAGGGTGTaGGGTGGGCCCTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSWETRV*GGPWWS
Trigger: AGACCACCAGGGCCCACCCCACACCCTTGTTTCCCA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp TGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAAAAACATCAGGGGCTGCTaGATCCTGCTGGGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: CIPHKTRPLCKMPARPPKNIRGC*ILLGEV
Trigger: CACTTCACCCAGCAGGATCCAGCAGCCCCTGATGTT...TTTGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTGAAGGTCAGCCTGCTTaGGCGGGGGACCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPREGQPA*AGDLGS
Trigger: GCTCCCCAGGTCCCCCGCCCAAGCAGGCTGACCTTC...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGCTGCAGGGCCCCCATaGGGCTCTCTGTTCGGTTTA +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSAAGPP*GSLFGL
Trigger: TAAACCGAACAGAGAGCCCCATGGGGGCCCTGCAGC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATGGGTTTTGCAGCGGTaGCGGCAGCCCCGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSWVLQR*RQPRAQ
Trigger: CTGGGCGCGGGGCTGCCGCCACCGCTGCAAAACCCA...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACAGTCCCGGGCCACCCTaGGGTCCGCGACCCAACGAC +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHSPGPP*GPRPND
Trigger: GTCGTTGGGTCGCGGACCCCAGGGTGGCCCGGGACT...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCAAGTCCCGGGCCACCCTaGGGTCCGCGACCCAACGAC +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSSPGPP*GPRPND
Trigger: GTCGTTGGGTCGCGGACCCCAGGGTGGCCCGGGACT...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTTCCACTACGTGCTGTaGGACCGGCCCGCGCACGCG +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPRFHYVL*DRPAHA
Trigger: CGCGTGCGCGGGCCGGTCCCACAGCACGTAGTGGAA...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAACTGATGACAGCCCGTaGCGCCAGGGGTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGTDDSP*RQGFQL
Trigger: CAGTTGGAACCCCTGGCGCCACGGGCTGTCATCAGT...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAAAAAACGGCATGGGGGTaGGGTGAGTTCAAACCTGGC +
Preference number: 4 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAEKTAWG*GEFKPG
Trigger: GCCAGGTTTGAACTCACCCCACCCCCATGCCGTTTT...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR TCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGGAACTGTGGCTACCCTaGGTTGACGTCTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRELWLP*VDVWEL
Trigger: CAACTCCCAGACGTCAACTCAGGGTAGCCACAGTTC...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAACCTCTTGACAGTACCTaGGTGGGAAACAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAEPLDST*VGNKGV
Trigger: CACACCCTTGTTTCCCACTCAGGTACTGTCAAGAGG...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR TCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCACCGATCAGGAGCCTCTaGGGCGGGTGGATCCGTGGG +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSPIRSL*GGWIRG
Trigger: CCCACGGATCCACCCGCCTCAGAGGCTCCTGATCGG...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACCCGATCAGGAGCCTCTaGGGCGGGTGGATCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHPIRSL*GGWIRG
Trigger: CCCACGGATCCACCCGCCTCAGAGGCTCCTGATCGG...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACTGCTGCGGCTCAGGTTaGTGGGCGATGGCGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHCCGSG*WAMAAA
Trigger: TGCGGCCGCCATCGCCCATCAACCTGAGCCGCAGCA...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAACCAACTGATCTTGAGTaGACCCCTGGAGAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAEPTDLE*TPGEAV
Trigger: GACAGCTTCTCCAGGGGTTCACTCAAGATCAGTTGG...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR GCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACCCCCCGTGTTCACCTTaGGCGCGTCCCTGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHPPCSP*ARPCSR
Trigger: TCGGCTGCAGGGACGCGCGCAAGGTGAACACGGGGG...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCATGGTCTACTCCGATaGCTGGGCCTAAAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSHGLLR*LGLKPP
Trigger: TGGGGGCTTTAGGCCCAGGCATCGGAGTAGACCATG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGACATGGTCTACTCCGATaGCTGGGCCTAAAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGHGLLR*LGLKPP
Trigger: TGGGGGCTTTAGGCCCAGGCATCGGAGTAGACCATG...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGTCTCTGAGCTCCTTGTaGTGCTTTGGGCCCGTACAG +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRSLSSL*CFGPVQ
Trigger: CTGTACGGGCCCAAAGCAGCACAAGGAGCTCAGAGA...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTGGGGACCTTGAGCTaGCTCCTGCAAGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGVGTLS*LLQVFL
Trigger: GAGGAACACTTGCAGGAGGCAGCTCAAGGTCCCCAC...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGTGGGGACCTTGAGCTaGCTCCTGCAAGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSVGTLS*LLQVFL
Trigger: GAGGAACACTTGCAGGAGGCAGCTCAAGGTCCCCAC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGCCAACATCAGGGGCTaGTGGATCCTGCTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSANIRG*WILLGE
Trigger: TTCACCCAGCAGGATCCAGCAGCCCCTGATGTTGGC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTAGCAGGAGTGGGTTTTaGAGCGGTGGCGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPRSRSGF*SGGGSP
Trigger: GGGGCTGCCGCCACCGCTGCAAAACCCACTCCTGCT...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGGTGCTTCCACTACGTaGTGTGGGACCGGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHGASTT*CGTGPR
Trigger: GCGCGGGCCGGTCCCACAGCACGTAGTGGAAGCACC...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAGCAGTAGCTGTACCGTaGTGGGCAACTCATCTAGGG +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKAVAVP*WATHLG
Trigger: CCCTAGATGAGTTGCCCAGCACGGTACAGCTACTGC...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGGGATTCCCCAGGCTTaGCGCGCGGCTGGACCTCTC +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHGIPQA*RAAGPL
Trigger: GAGAGGTCCAGCCGCGCGGCAAGCCTGGGGAATCCC...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAGCTCCCTGTTCTTCATaGCCGAATCCATGCACACCC +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKAPCSS*PNPCTP
Trigger: GGGTGTGCATGGATTCGGGCATGAAGAACAGGGAGC...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCAACACGTCAAAGGCCTaGGGCTCTGAGCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSNTSKA*GSEPTE
Trigger: CTCTGTGGGCTCAGAGCCCCAGGCCTTTGACGTGTT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTCTTCAGCAGGGGCGTaGCGGACATCAGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSSSAGA*RTSEFL
Trigger: CAGGAACTCTGATGTCCGCCACGCCCCTGCTGAAGA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCACCCTCATCTCTAGGTaGCCACTGTCCCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSTLISR*PLSLLA
Trigger: GGCCAAGAGGGACAGTGGCCACCTAGAGATGAGGGT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTTTGACAGTACCTGAGTaGGAAACAAGGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: NLDKRGSSLHVGESGAPALTVPE*ETRVWG
Trigger: ACCCCACACCCTTGTTTCCCACTCAGGTACTGTCAA...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGAACATCAGGGGCTGCTaGATCCTGCTGGGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRNIRGC*ILLGEV
Trigger: CACTTCACCCAGCAGGATCCAGCAGCCCCTGATGTT...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCAGGAGGAAGGCTTCTaGCCAATGCCAAGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRQEEGF*PMPSLA
Trigger: AGCCAGACTTGGCATTGGCCAGAAGCCTTCCTCCTG...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGGTGGATCCGTGGGCTaGGGTCCTGGTGAATCCTTA +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSGGSVG*GPGESL
Trigger: TAAGGATTCACCAGGACCCCAGCCCACGGATCCACC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCACGCCTGAACTGGGCGTaGCCAGCTGCCCACTCTCCG +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSRLNWA*PAAHSP
Trigger: CGGAGAGTGGGCAGCTGGCCACGCCCAGTTCAGGCG...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTGGGAGCTTGGTCCTTaGGCCATCTGGAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSWELGP*AIWRSS
Trigger: TGATGACCTCCAGATGGCTCAAGGACCAAGCTCCCA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR TCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGAACTGTGGCTACCCTaGGTTGACGTCTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSELWLP*VDVWEL
Trigger: CAACTCCCAGACGTCAACTCAGGGTAGCCACAGTTC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR TCA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTTGACAGTACCTaGGTGGGAAACAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRPLDST*VGNKGV
Trigger: CACACCCTTGTTTCCCACTCAGGTACTGTCAAGAGG...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCCAGCACTGGCCTCTTaGCAGTACCTGAGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSPALAS*QYLSGK
Trigger: TTTCCCACTCAGGTACTGTCAAGAGGCCAGTGCTGG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTCTCTGAGCTCCTTGTaGTGCTTTGGGCCCGTACAG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSSLSSL*CFGPVQ
Trigger: CTGTACGGGCCCAAAGCAGCACAAGGAGCTCAGAGA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCGGAGCCACTGCTTCTTaGTGCAGAAGCTCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGGATAS*CRSSCE
Trigger: CTCACAAGAGCTTCTGCAGCAAGAAGCAGTGGCTCC...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGGGGGAGATGGGGTCTaGTCCATTCATTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSGGDGV*SIHCCS
Trigger: AGAGCAGCAATGAATGGAGCAGACCCCATCTCCCCC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATTAGCCCAGCAAGCGTaGTCCGTGGGCGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSLAQQA*SVGGLG
Trigger: ACCCAGGCCGCCCACGGAGCACGCTTGCTGGGCTAA...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGGCTGCCCCGTCGGGTaGTTCCACTACGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHGCPVG*FHYVLW
Trigger: CCACAGCACGTAGTGGAAGCACCCGACGGGGCAGCC...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCACATACACAGCCCCATaGGCTGGAGGCCATGGTCTA +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSTYTAP*AGGHGL
Trigger: TAGACCATGGCCTCCAGCCCATGGGGCTGTGTATGT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTTCGGAGTTTTCAAGTaGCCTGGGAAAGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSFGVFK*PGKAPP
Trigger: GGGAGGGGCTTTCCCAGGCCACTTGAAAACTCCGAA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGATGTGACTGTCAGCTCTaGGGTTCTCCGGGAACACGT +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGCDCQL*GSPGTR
Trigger: ACGTGTTCCCGGAGAACCCCAGAGCTGACAGTCACA...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTGTGACTGTCAGCTCTaGGGTTCTCCGGGAACACGT +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSCDCQL*GSPGTR
Trigger: ACGTGTTCCCGGAGAACCCCAGAGCTGACAGTCACA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAAGAGGTCATCAGTTACTaGGAGTCGTTCTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAEEVISY*ESFSLS
Trigger: GCTCAGAGAGAACGACTCCCAGTAACTGATGACCTC...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR CCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGGGTGGCCCACTGGGTaGGGAGCCACTGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHGWPTG*GATASC
Trigger: GCAAGAAGCAGTGGCTCCCCACCCAGTGGGCCACCC...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCAACATCAGGGGCTGCTaGATCCTGCTGGGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSNIRGC*ILLGEV
Trigger: CACTTCACCCAGCAGGATCCAGCAGCCCCTGATGTT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCAGGAGGAAGGCTTCTaGCCAATGCCAAGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSQEEGF*PMPSLA
Trigger: AGCCAGACTTGGCATTGGCCAGAAGCCTTCCTCCTG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCATTGCTGCTCTCTCTaGCTTAGACGGCCGATCAGG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSHCCSL*LRRPIR
Trigger: CCTGATCGGCCGTCTAAGCCAGAGAGAGCAGCAATG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGCTCCCAGCAGGAGTaGGTTTTGCAGCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPRCSQQE*VLQRWR
Trigger: CCGCCACCGCTGCAAAACCCACTCCTGCTGGGAGCA...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTAGCTGTACCGTGCTaGGCAACTCATCTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGVAVPC*ATHLGA
Trigger: TGCCCCTAGATGAGTTGCCCAGCACGGTACAGCTAC...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTGGGATGAAAGTGAGATaGGGGTGGCCCACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPRGMKVR*GWPTGW
Trigger: CCACCCAGTGGGCCACCCTCATCTCACTTTCATCCC...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCCTCTTGACAGTACCTaGGTGGGAAACAAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSPLDST*VGNKGV
Trigger: CACACCCTTGTTTCCCACTCAGGTACTGTCAAGAGG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR TCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCAGGCATGGGGGTGGGGTaGGTTCAAACCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSGMGVG*VQTWLS
Trigger: GGACAGCCAGGTTTGAACTCACCCCACCCCCATGCC...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR GCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTCTGAGCTCCTTGTGCTaGTTTGGGCCCGTACAGGGC +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPRLSSLC*FGPVQG
Trigger: GCCCTGTACGGGCCCAAAGCAGCACAAGGAGCTCAG...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGCCACTGCTTCTTGCTaGAGAAGCTCTTGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSATASC*RSSCES
Trigger: GGACTCACAAGAGCTTCTGCAGCAAGAAGCAGTGGC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGGAGCCACTGCTTCTTaGTGCAGAAGCTCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSGATAS*CRSSCE
Trigger: CTCACAAGAGCTTCTGCAGCAAGAAGCAGTGGCTCC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACTGGCCCAGGGCTCGCTaGGTGGTGACTCGAATGAGG +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHWPRAR*VVTRMR
Trigger: CCTCATTCGAGTCACCACGCAGCGAGCCCTGGGCCA...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTAGCAACCCTACACCATaGACCAGCGCCACTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPRSNPTP*TSATAP
Trigger: GGGAGCAGTGGCGCTGGTGCATGGTGTAGGGTTGCT...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTGCGCACGACAAGCCCTaGGTCAGGAGGTTGAGCACA +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPRAHDKP*VRRLST
Trigger: TGTGCTCAACCTCCTGACGCAGGGCTTGTCGTGCGC...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCACCTTCCAGTCCTCACTaGATGAGCCTGCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSPSSPH*MSLRAA
Trigger: TGCGGCGCGCAGGCTCATCCAGTGAGGACTGGAAGG...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACCTCCTTGTGCTGCTTTaGGCCCGTACAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHLLVLL*ARTGLG
Trigger: GCCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAG...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAATTGACAGTACCTGAGTaGGAAACAAGGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKLTVPE*ETRVWG
Trigger: ACCCCACACCCTTGTTTCCCACTCAGGTACTGTCAA...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCAAGGCGGGTGGATCCGTaGGCTGGGGTCCTGGTGAAT +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSRRVDP*AGVLVN
Trigger: ATTCACCAGGACCCCAGCCCACGGATCCACCCGCCT...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACAGACTTGGGGGTGCCTaGGGCCTCCACAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHRLGGA*GLHSSS
Trigger: AGAGGAGCTGTGGAGGCCCCAGGCACCCCCAAGTCT...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTGCTGCAGGGCCCCCATaGGGCTCTCTGTTCGGTTTA +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPRAAGPP*GSLFGL
Trigger: TAAACCGAACAGAGAGCCCCATGGGGGCCCTGCAGC...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATGCTCCCAGCAGGAGTaGGTTTTGCAGCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSCSQQE*VLQRWR
Trigger: CCGCCACCGCTGCAAAACCCACTCCTGCTGGGAGCA...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACCAGGTTGATGGGCGATaGCGGCCGCAGATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHQVDGR*RPQIQL
Trigger: GAGCTGGATCTGCGGCCGCCATCGCCCATCAACCTG...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCAGTAGGCCATGCCATGTaGGCATCGGGCAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSVGHAM*ASGRVL
Trigger: CAGGACCCTGCCCGATGCCCACATGGCATGGCCTAC...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTGGCTACCCTGAGTTaGCGTCTGGGAGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHVATLS*RLGVVG
Trigger: CCCCACAACTCCCAGACGTCAACTCAGGGTAGCCAC...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCACTGAGCTCCTTGTGCTaGTTTGGGCCCGTACAGGGC +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSLSSLC*FGPVQG
Trigger: GCCCTGTACGGGCCCAAAGCAGCACAAGGAGCTCAG...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTGCTCCATTCATTGCTaGTCTCTCTGGCTTAGACGG +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSCSIHC*SLWLRR
Trigger: CCGTCTAAGCCAGAGAGAGCAGCAATGAATGGAGCA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAGTCTGCTCCATTCATTaGTGCTCTCTCTGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKVCSIH*CSLWLR
Trigger: TCTAAGCCAGAGAGAGCAGCAATGAATGGAGCAGAC...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGCGCACGACAAGCCCTaGGTCAGGAGGTTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHAHDKP*VRRLST
Trigger: TGTGCTCAACCTCCTGACGCAGGGCTTGTCGTGCGC...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGATGTCCAAGCTGCCTaGACCAACGTTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHDVQAA*TNVAGP
Trigger: GGGCCCAGCAACGTTGGTGCAGGCAGCTTGGACATC...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACTATCACTGGAGGCGCTaGGGGATTCCCCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHYHWRR*GIPQAC
Trigger: GCAAGCCTGGGGAATCCCGCAGCGCCTCCAGTGATA...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACCTCGGCCTCCCAAAGTaGTGGGATTCCTGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHLGLPK*WDSWRE
Trigger: CTCACGCCAGGAATCCCAGCACTTTGGGAGGCCGAG...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACACAGAGCCCTTGGGGTaGGCTCCAGGGATCATAGGG +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHTEPLG*APGIIG
Trigger: CCCTATGATCCCTGGAGCCCACCCCAAGGGCTCTGT...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTCTTCAGCAGGGGCGTaGCGGACATCAGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPRSSAGA*RTSEFL
Trigger: CAGGAACTCTGATGTCCGCCACGCCCCTGCTGAAGA...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGAGGTCATCAGTTACTaGGAGTCGTTCTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSEVISY*ESFSLS
Trigger: GCTCAGAGAGAACGACTCCCAGTAACTGATGACCTC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACCCAGCCGTGGGAGCTTaGTCCTTGAGCCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHPAVGA*SLSHLE
Trigger: CTCCAGATGGCTCAAGGACCAAGCTCCCACGGCTGG...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCAGGCCACTGTCCCTCTTaGCCTTCATGCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSGHCPS*PSCCRE
Trigger: CTCCCTGCAGCATGAAGGCCAAGAGGGACAGTGGCC...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTACCCTCATCTCTAGGTaGCCACTGTCCCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPRTLISR*PLSLLA
Trigger: GGCCAAGAGGGACAGTGGCCACCTAGAGATGAGGGT...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTTGACAGTACCTGAGTaGGAAACAAGGGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSLTVPE*ETRVWG
Trigger: ACCCCACACCCTTGTTTCCCACTCAGGTACTGTCAA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCAGCTGCAGGGCCCCCATaGGGCTCTCTGTTCGGTTTA +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSAAGPP*GSLFGL
Trigger: TAAACCGAACAGAGAGCCCCATGGGGGCCCTGCAGC...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCAACTGATGACAGCCCGTaGCGCCAGGGGTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSTDDSP*RQGFQL
Trigger: CAGTTGGAACCCCTGGCGCCACGGGCTGTCATCAGT...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGCTCGATGGTATCACTaGAGGCGCTGCGGGATTCCC +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHARWYH*RRCGIP
Trigger: GGGAATCCCGCAGCGCCTCCAGTGATACCATCGAGC...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTCCAGCACTGGCCTCTTaGCAGTACCTGAGTGGGAAA +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPRPALAS*QYLSGK
Trigger: TTTCCCACTCAGGTACTGTCAAGAGGCCAGTGCTGG...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACCCTGCGTCAGGAGGTTaGGCACAGACCATGTGGACA +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHPASGG*AQTMWT
Trigger: TGTCCACATGGTCTGTGCTCAACCTCCTGACGCAGG...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGCCAACATCAGGGGCTaGTGGATCCTGCTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHANIRG*WILLGE
Trigger: TTCACCCAGCAGGATCCAGCAGCCCCTGATGTTGGC...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGCTCCATTCATTaGTGCTCTCTCTGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: LAQRGQSRQARLITPRWGVCSIH*CSLWLR
Trigger: TCTAAGCCAGAGAGAGCAGCAATGAATGGAGCAGAC...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGTCTGCTCCATTCATTaGTGCTCTCTCTGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSVCSIH*CSLWLR
Trigger: TCTAAGCCAGAGAGAGCAGCAATGAATGGAGCAGAC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCACTGCATAGCAGTTATTaGGTCGCTCCGGCACCTCGC +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSLHSSY*VAPAPR
Trigger: GCGAGGTGCCGGAGCGACCCAATAACTGCTATGCAG...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR TCA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCACTCCTTTAAGGAGGTaGTTGTCTCCATTCATTCCC +
Preference number: 4 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSTPLRR*LSPFIP
Trigger: GGGAATGAATGGAGACAATCACCTCCTTAAAGGAGT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR GCA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTAACGTTGCTGGGCCCTaGATAGCAGTTATTGGGTCG +
Preference number: 4 (lower is better)
Translates to: ISLAQRGQSRQARLITPRNVAGP*IAVIGS
Trigger: CGACCCAATAACTGCTATGCAGGGCCCAGCAACGTT...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCAGCAGTAGCTGTACCGTaGTGGGCAACTCATCTAGGG +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSAVAVP*WATHLG
Trigger: CCCTAGATGAGTTGCCCAGCACGGTACAGCTACTGC...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACTGTGACTGTCAGCTCTaGGGTTCTCCGGGAACACGT +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHCDCQL*GSPGTR
Trigger: ACGTGTTCCCGGAGAACCCCAGAGCTGACAGTCACA...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACCAGGAGGAAGGCTTCTaGCCAATGCCAAGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHQEEGF*PMPSLA
Trigger: AGCCAGACTTGGCATTGGCCAGAAGCCTTCCTCCTG...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCAGCCACTGCTTCTTGCTaGAGAAGCTCTTGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSATASC*RSSCES
Trigger: GGACTCACAAGAGCTTCTGCAGCAAGAAGCAGTGGC...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACTCATGCCCGAATCCATaGACACCCACCCTGTATTCC +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHSCPNP*TPTLYS
Trigger: GGAATACAGGGTGGGTGTGCATGGATTCGGGCATGA...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCACTGCACCAACGTTGCTaGGCCCTGCATAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSLHQRC*ALHSSY
Trigger: ATAACTGCTATGCAGGGCCCAGCAACGTTGGTGCAG...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCACTCTTCAAAGCTCGATaGTATCACTGGAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSLFKAR*YHWRRC
Trigger: GCAGCGCCTCCAGTGATACCATCGAGCTTTGAAGAG...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATGCTCCATTCATTGCTaGTCTCTCTGGCTTAGACGG +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSCSIHC*SLWLRR
Trigger: CCGTCTAAGCCAGAGAGAGCAGCAATGAATGGAGCA...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR GCA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGCTCACTGCAACCTCTaGCTCCCTGTTCAAGCAATT +
Preference number: 4 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHAHCNL*LPVQAI
Trigger: AATTGCTTGAACAGGGAGGCAGAGGTTGCAGTGAGC...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR GCA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCAAAGACACGGCCTCTGTaGAAAATGCCGGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSKTRPL*KMPAEK
Trigger: TTTTTCAGCCGGCATTTTGCACAGAGGCCGTGTCTT...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412055.6
3UTR CAA 72 bp TTTCCCAGTGAGTATGAATTTATTATCCTAGGTTGTTaGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: FPSEYEFIILGC*KEALGNSFKEV
Trigger: CACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAGGATAATAAATTCATACTCACTGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS CCA 90 bp GCAGCCCCAGCGCGCCCGCCACAGCCAACAGCCGAGGGCCCGGGCTaGCATCCCAGCCCCGTGGGCCGTCCAGCAGGCGGCGACGGCACA +
Preference number: 5 (lower is better)
Translates to: AAPARPPQPTAEGPG*HPSPVGRPAGGDGT
Trigger: TGTGCCGTCGCCGCCTGCTGGACGGCCCACGGGGCTGGGATGCCAGCCCGGGCCCTCGGCTGTTGGCTGTGGCGGGCGCGCTGGGGCTGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 90 bp CCCACGCGGCCTGGGCCCGGGTACAGCCAGAGCGCAGCCGCCAGCTaGAAGCCGCTAGCCAGCAGCCCCAGCGCGCCCGCCACAGCCAAC +
Preference number: 5 (lower is better)
Translates to: PTRPGPGYSQSAAAS*KPLASSPSAPATAN
Trigger: GTTGGCTGTGGCGGGCGCGCTGGGGCTGCTGGCTAGCGGCTTGCAGCTGGCGGCTGCGCTCTGGCTGTACCCGGGCCCAGGCCGCGTGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 90 bp CGCCACAGCCAACAGCCGAGGGCCCGGGCTGGCATCCCAGCCCCGTaGGCCGTCCAGCAGGCGGCGACGGCACAGGCAGAGCGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: RHSQQPRARAGIPAP*AVQQAATAQAERAQ
Trigger: CTGGGCACGCTCTGCCTGTGCCGTCGCCGCCTGCTGGACGGCCCACGGGGCTGGGATGCCAGCCCGGGCCCTCGGCTGTTGGCTGTGGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 90 bp GCGCCTCCAGGCGGCGGGGAGGCCAGGCCGCGGAGGCCGCAGCGCTaGAACACACTGTCTCGCACTAGGTGCTCGCGGAAGAGCGCGGCG +
Preference number: 5 (lower is better)
Translates to: APPGGGEARPRRPQR*NTLSRTRCSRKSAA
Trigger: CGCCGCGCTCTTCCGCGAGCACCTAGTGCGAGACAGTGTGTTCCAGCGCTGCGGCCTCCGCGGCCTGGCCTCCCCGCCGCCTGGAGGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 90 bp GACGGCGCCGGGCACGCCAGACGCATCAGCTTAGCCCAGCAAGCGTaGTCCGTGGGCGGCCTGGGTCTCGCGGCAGCCACCGCGGCCAAC +
Preference number: 5 (lower is better)
Translates to: DGAGHARRISLAQQA*SVGGLGLAAATAAN
Trigger: GTTGGCCGCGGTGGCTGCCGCGAGACCCAGGCCGCCCACGGAGCACGCTTGCTGGGCTAAGCTGATGCGTCTGGCGTGCCCGGCGCCGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 90 bp GATGGCGCCGGTCCCACACCGTTGCGGGACAGTCCCGGGCCACCCTaGGGTCCGCGACCCAACGACGCAGCCGAGCCCCAGGCGCCTGAA +
Preference number: 5 (lower is better)
Translates to: DGAGPTPLRDSPGPP*GPRPNDAAEPQAPE
Trigger: TTCAGGCGCCTGGGGCTCGGCTGCGTCGTTGGGTCGCGGACCCCAGGGTGGCCCGGGACTGTCCCGCAACGGTGTGGGACCGGCGCCATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS TCA 90 bp CTTCCACTACGTGCTGTGGGACCGGCCCGCGCACGCGCACGTCGCTaGGCGACCTGCAGCGGCCGCGGAGGAGCGAGGAGCCAGCGTCGT +
Preference number: 5 (lower is better)
Translates to: LPLRAVGPARARARR*ATCSGRGGARSQRR
Trigger: ACGACGCTGGCTCCTCGCTCCTCCGCGGCCGCTGCAGGTCGCTCAGCGACGTGCGCGTGCGCGGGCCGGTCCCACAGCACGTAGTGGAAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 90 bp CTGCCAGAAGCCGCAGCGGCTGCCCCGTCGGGTGCTTCCACTACGTaGTGTGGGACCGGCCCGCGCACGCGCACGTCGCTGAGCGACCTG +
Preference number: 5 (lower is better)
Translates to: LPEAAAAAPSGASTT*CGTGPRTRTSLSDL
Trigger: CAGGTCGCTCAGCGACGTGCGCGTGCGCGGGCCGGTCCCACAGCACGTAGTGGAAGCACCCGACGGGGCAGCCGCTGCGGCTTCTGGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 90 bp GAAGTGGACACCCCACCAGGCCCACGAGAAGCGGCCCACGCGGCCTaGGCCCGGGTACAGCCAGAGCGCAGCCGCCAGCTGCAAGCCGCT +
Preference number: 5 (lower is better)
Translates to: EVDTPPGPREAAHAA*ARVQPERSRQLQAA
Trigger: AGCGGCTTGCAGCTGGCGGCTGCGCTCTGGCTGTACCCGGGCCCAGGCCGCGTGGGCCGCTTCTCGTGGGCCTGGTGGGGTGTCCACTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 90 bp GCCAGGGCGAGCGCCCATGTCAGCTCCAGGAGGCGCAGCCAGAAGTaGACACCCCACCAGGCCCACGAGAAGCGGCCCACGCGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: ARASAHVSSRRRSQK*TPHQAHEKRPTRPG
Trigger: CCCAGGCCGCGTGGGCCGCTTCTCGTGGGCCTGGTGGGGTGTCCACTTCTGGCTGCGCCTCCTGGAGCTGACATGGGCGCTCGCCCTGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 90 bp AGAAGCCGCAGCGGCTGCCCCGTCGGGTGCTTCCACTACGTGCTGTaGGACCGGCCCGCGCACGCGCACGTCGCTGAGCGACCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: RSRSGCPVGCFHYVL*DRPAHAHVAERPAA
Trigger: CGCTGCAGGTCGCTCAGCGACGTGCGCGTGCGCGGGCCGGTCCCACAGCACGTAGTGGAAGCACCCGACGGGGCAGCCGCTGCGGCTTCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 90 bp ACCCCTGGAGAAGCTGTCGAGGGAGCTGCCAGAAGCCGCAGCGGCTaGCCCGTCGGGTGCTTCCACTACGTGCTGTGGGACCGGCCCGCG +
Preference number: 5 (lower is better)
Translates to: TPGEAVEGAARSRSG*PVGCFHYVLWDRPA
Trigger: CGCGGGCCGGTCCCACAGCACGTAGTGGAAGCACCCGACGGGGCAGCCGCTGCGGCTTCTGGCAGCTCCCTCGACAGCTTCTCCAGGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 90 bp ATGCACCAGCGCCACTGCTCCCAGCAGGAGTGGGTTTTGCAGCGGTaGCGGCAGCCCCGCGCCCAGGCCGAGCAGAGTCAGGGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: MHQRHCSQQEWVLQR*RQPRAQAEQSQGCQ
Trigger: CTGGCAGCCCTGACTCTGCTCGGCCTGGGCGCGGGGCTGCCGCCACCGCTGCAAAACCCACTCCTGCTGGGAGCAGTGGCGCTGGTGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 90 bp CAGGTTGATGGGCGATGGCGGCCGCAGATCCAGCTCGCTCAGCGATaGCGCCGGTCCCACACCGTTGCGGGACAGTCCCGGGCCACCCTG +
Preference number: 5 (lower is better)
Translates to: QVDGRWRPQIQLAQR*RRSHTVAGQSRATL
Trigger: CAGGGTGGCCCGGGACTGTCCCGCAACGGTGTGGGACCGGCGCCATCGCTGAGCGAGCTGGATCTGCGGCCGCCATCGCCCATCAACCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 90 bp GTATCACTGGAGGCGCTGCGGGATTCCCCAGGCTTGCCGCGCGGCTaGACCTCTCCCTGGCCGTCCCCCTGCCGAGCGGCGGTAGAATCA +
Preference number: 5 (lower is better)
Translates to: VSLEALRDSPGLPRG*TSPWPSPCRAAVES
Trigger: TGATTCTACCGCCGCTCGGCAGGGGGACGGCCAGGGAGAGGTCCAGCCGCGCGGCAAGCCTGGGGAATCCCGCAGCGCCTCCAGTGATAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 90 bp CAGCAGGTCTGTCGCGAGCAACCCTACACCATGCACCAGCGCCACTaGTCCCAGCAGGAGTGGGTTTTGCAGCGGTGGCGGCAGCCCCGC +
Preference number: 5 (lower is better)
Translates to: QQVCREQPYTMHQRH*SQQEWVLQRWRQPR
Trigger: GCGGGGCTGCCGCCACCGCTGCAAAACCCACTCCTGCTGGGAGCAGTGGCGCTGGTGCATGGTGTAGGGTTGCTCGCGACAGACCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 90 bp GGGCAGGGTCCTGGCCCTGCGTCAGGACCGCTCTTCAAAGCTCGATaGTATCACTGGAGGCGCTGCGGGATTCCCCAGGCTTGCCGCGCG +
Preference number: 5 (lower is better)
Translates to: GQGPGPASGPLFKAR*YHWRRCGIPQACRA
Trigger: CGCGCGGCAAGCCTGGGGAATCCCGCAGCGCCTCCAGTGATACCATCGAGCTTTGAAGAGCGGTCCTGACGCAGGGCCAGGACCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS TCA 90 bp CCACGGCCGCGCCCCAGGCGCACGACAAGCCCTGCGTCAGGAGGTTaGGCACAGACCATGTGGACAGCAGGTCTGTCGCGAGCAACCCTA +
Preference number: 5 (lower is better)
Translates to: PRPRPRRTTSPASGG*AQTMWTAGLSRATL
Trigger: TAGGGTTGCTCGCGACAGACCTGCTGTCCACATGGTCTGTGCTCAACCTCCTGACGCAGGGCTTGTCGTGCGCCTGGGGCGCGGCCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 90 bp GCGTCAGGACCGCTCTTCAAAGCTCGATGGTATCACTGGAGGCGCTaGGGGATTCCCCAGGCTTGCCGCGCGGCTGGACCTCTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: ASGPLFKARWYHWRR*GIPQACRAAGPLPG
Trigger: GCCAGGGAGAGGTCCAGCCGCGCGGCAAGCCTGGGGAATCCCGCAGCGCCTCCAGTGATACCATCGAGCTTTGAAGAGCGGTCCTGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCGCCGGTCCCACACCGTaGCGGGACAGTCCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: SRQARLITPRWGVWGTCSAGPTP*RDSPGP
Trigger: TGGCCCGGGACTGTCCCGCAACGGTGTGGGACCGGC...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 90 bp CCAAGCTGCCTGCACCAACGTTGCTGGGCCCTGCATAGCAGTTATTaGGTCGCTCCGGCACCTCGCTCTTTCCTGACGGCGCCGGGCACG +
Preference number: 5 (lower is better)
Translates to: PSCLHQRCWALHSSY*VAPAPRSFLTAPGT
Trigger: CGTGCCCGGCGCCGTCAGGAAAGAGCGAGGTGCCGGAGCGACCCAATAACTGCTATGCAGGGCCCAGCAACGTTGGTGCAGGCAGCTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCTCGTCGAGCTCGGCTTaGGGATGGCTGCCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: SRQARLITPRWGVWGTCSSSSSA*GWLPRR
Trigger: GCGCCGGGGCAGCCATCCCAAAGCCGAGCTCGACGA...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCGGGATTCCCCAGGCTaGCCGCGCGGCTGGACCTCT +
Preference number: 5 (lower is better)
Translates to: SRQARLITPRWGVWGTCSRDSPG*PRGWTS
Trigger: AGAGGTCCAGCCGCGCGGCAAGCCTGGGGAATCCCG...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS TCA 90 bp CCCTGCATAGCAGTTATTGGGTCGCTCCGGCACCTCGCTCTTTCCTaGCGGCGCCGGGCACGCCAGACGCATCAGCTTAGCCCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: PCIAVIGSLRHLALS*RRRARQTHQLSPAS
Trigger: GCTTGCTGGGCTAAGCTGATGCGTCTGGCGTGCCCGGCGCCGTCAGGAAAGAGCGAGGTGCCGGAGCGACCCAATAACTGCTATGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAGCCCCCGTGTTCACCTaGCGCGCGTCCCTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: PESMHTHPVFRIRHGLCAAPVFT*RASLQP
Trigger: CGGCTGCAGGGACGCGCGCAAGGTGAACACGGGGGC...TGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCTCAGCGCCAGCCCTCTaGGGGGTCTCAACCGGCAGC +
Preference number: 5 (lower is better)
Translates to: SRQARLITPRWGVWGTCSSAPAL*GVSTGS
Trigger: GCTGCCGGTTGAGACCCCCAAGAGGGCTGGCGCTGA...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTGGAAGGTCAGCCTGCTaGGGCGGGGGACCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: PPCIPHKTRPLCKMPARPGRSAC*GGGPGE
Trigger: CTCCCCAGGTCCCCCGCCCAAGCAGGCTGACCTTCC...AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CAA 90 bp CCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCACCAGGGATGAGAGACTaGGGGGTGCCTGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PVFRIRHGLCAKCRLGLPPGMRD*GVPGAS
Trigger: GGAGGCCCCAGGCACCCCCAAGTCTCTCATCCCTGG...TGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CAA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAAGCCGGTCCCACACCGTaGCGGGACAGTCCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAEAGPTP*RDSPGP
Trigger: TGGCCCGGGACTGTCCCGCAACGGTGTGGGACCGGC...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS TCA 90 bp GCCCACTGGGTGGGGAGCCACTGCTTCTTGCTGCAGAAGCTCTTGTaGGTCCAGAGGTCCTGTCCAGCCGTGGGAGCTTGGTCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: AHWVGSHCFLLQKLL*VQRSCPAVGAWSLS
Trigger: GCTCAAGGACCAAGCTCCCACGGCTGGACAGGACCTCTGGACTCACAAGAGCTTCTGCAGCAAGAAGCAGTGGCTCCCCACCCAGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CCA 90 bp TTAGACGGCCGATCAGGAGCCTCTGAGGCGGGTGGATCCGTGGGCTaGGGTCCTGGTGAATCCTTAGCGTCAGGAAGGTCAGCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LDGRSGASEAGGSVG*GPGESLASGRSACL
Trigger: CAAGCAGGCTGACCTTCCTGACGCTAAGGATTCACCAGGACCCCAGCCCACGGATCCACCCGCCTCAGAGGCTCCTGATCGGCCGTCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS-3UTR CAA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTATGCTGCGGCTCAGGTaGATGGGCGATGGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAMLRLR*MGDGGR
Trigger: GCGGCCGCCATCGCCCATCAACCTGAGCCGCAGCAT...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAACGGGATTCCCCAGGCTaGCCGCGCGGCTGGACCTCT +
Preference number: 5 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAERDSPG*PRGWTS
Trigger: AGAGGTCCAGCCGCGCGGCAAGCCTGGGGAATCCCG...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR CAA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCGCTCATCACTCCACGTaGGGGAGTCTGGGGCACCTG +
Preference number: 5 (lower is better)
Translates to: SRQARLITPRWGVWGTCSAHHST*GSLGHL
Trigger: CAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGC...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 90 bp ACAGACCATGTGGACAGCAGGTCTGTCGCGAGCAACCCTACACCATaGACCAGCGCCACTGCTCCCAGCAGGAGTGGGTTTTGCAGCGGT +
Preference number: 5 (lower is better)
Translates to: TDHVDSRSVASNPTP*TSATAPSRSGFCSG
Trigger: ACCGCTGCAAAACCCACTCCTGCTGGGAGCAGTGGCGCTGGTGCATGGTGTAGGGTTGCTCGCGACAGACCTGCTGTCCACATGGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 90 bp CTCCGCCGGGTTGCGGATGAGGCTCTTGCTGATGTCCAAGCTGCCTaGACCAACGTTGCTGGGCCCTGCATAGCAGTTATTGGGTCGCTC +
Preference number: 5 (lower is better)
Translates to: LRRVADEALADVQAA*TNVAGPCIAVIGSL
Trigger: GAGCGACCCAATAACTGCTATGCAGGGCCCAGCAACGTTGGTGCAGGCAGCTTGGACATCAGCAAGAGCCTCATCCGCAACCCGGCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGCCCCCGTGTTCACCTaGCGCGCGTCCCTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: LAQRGQSRQARLITPRWGAPVFT*RASLQP
Trigger: CGGCTGCAGGGACGCGCGCAAGGTGAACACGGGGGC...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGCCCCCGTGTTCACCTaGCGCGCGTCCCTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSAPVFT*RASLQP
Trigger: CGGCTGCAGGGACGCGCGCAAGGTGAACACGGGGGC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGGGAAGGTCAGCCTGCTaGGGCGGGGGACCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRGRSAC*GGGPGE
Trigger: CTCCCCAGGTCCCCCGCCCAAGCAGGCTGACCTTCC...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS TCA 90 bp TCAGGCATCTCTTCAGCAGGGGCGTGGCGGACATCAGAGTTCCTGTaGCTGTCAGCTCTGGGGTTCTCCGGGAACACGTCAAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SGISSAGAWRTSEFL*LSALGFSGNTSKAW
Trigger: CCAGGCCTTTGACGTGTTCCCGGAGAACCCCAGAGCTGACAGTCACAGGAACTCTGATGTCCGCCACGCCCCTGCTGAAGAGATGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS GCA 90 bp GAGGTCATCAGTTACTGGGAGTCGTTCTCTCTGAGCTCCTTGTGCTaGTTTGGGCCCGTACAGGGCTGGGCCAAGGGGAGAGGCTACAGG +
Preference number: 5 (lower is better)
Translates to: EVISYWESFSLSSLC*FGPVQGWAKGRGYR
Trigger: CCTGTAGCCTCTCCCCTTGGCCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAGCTCAGAGAGAACGACTCCCAGTAACTGATGACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS GCA 90 bp CTGGAGGTCATCAGTTACTGGGAGTCGTTCTCTCTGAGCTCCTTGTaGTGCTTTGGGCCCGTACAGGGCTGGGCCAAGGGGAGAGGCTAC +
Preference number: 5 (lower is better)
Translates to: LEVISYWESFSLSSL*CFGPVQGWAKGRGY
Trigger: GTAGCCTCTCCCCTTGGCCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAGCTCAGAGAGAACGACTCCCAGTAACTGATGACCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CCA 90 bp TCGTTCTCTCTGAGCTCCTTGTGCTGCTTTGGGCCCGTACAGGGCTaGGCCAAGGGGAGAGGCTACAGGCTTCTCAGGCATCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SFSLSSLCCFGPVQG*AKGRGYRLLRHLFS
Trigger: GCTGAAGAGATGCCTGAGAAGCCTGTAGCCTCTCCCCTTGGCCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAGCTCAGAGAGAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CCA 90 bp AACCCACCCTGTCCTTCCAGCACTGGCCTCTTGACAGTACCTGAGTaGGAAACAAGGGTGTGGGGTGGGCCCTGGTGGTCTGAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: NPPCPSSTGLLTVPE*ETRVWGGPWWSEGE
Trigger: TTCTCCCTCAGACCACCAGGGCCCACCCCACACCCTTGTTTCCCACTCAGGTACTGTCAAGAGGCCAGTGCTGGAAGGACAGGGTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS-3UTR CAA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCGTGGGAGCTTGGTCCTaGAGCCATCTGGAGGTCATC +
Preference number: 5 (lower is better)
Translates to: SRQARLITPRWGVWGTCSVGAWS*SHLEVI
Trigger: GATGACCTCCAGATGGCTCAAGGACCAAGCTCCCAC...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGGAAGGTCAGCCTGCTaGGGCGGGGGACCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSGRSAC*GGGPGE
Trigger: CTCCCCAGGTCCCCCGCCCAAGCAGGCTGACCTTCC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCAGCAGGAGTGGGTTTaGCAGCGGTGGCGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGQQEWV*QRWRQP
Trigger: GGGCTGCCGCCACCGCTGCAAAACCCACTCCTGCTG...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp TGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAAACCACTCTCCGCCGGGTaGCGGATGAGGCTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: CIPHKTRPLCKMPARPPKPLSAG*RMRLLL
Trigger: CAGCAAGAGCCTCATCCGCAACCCGGCGGAGAGTGG...TTTGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CAA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGATCGTCGAGCTCGGCTTaGGGATGGCTGCCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: LAQRGQSRQARLITPRWGSSSSA*GWLPRR
Trigger: GCGCCGGGGCAGCCATCCCAAAGCCGAGCTCGACGA...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 90 bp CATCAGTTACTGGGAGTCGTTCTCTCTGAGCTCCTTGTGCTGCTTTaGGCCCGTACAGGGCTGGGCCAAGGGGAGAGGCTACAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: HQLLGVVLSELLVLL*ARTGLGQGERLQAS
Trigger: AGAAGCCTGTAGCCTCTCCCCTTGGCCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAGCTCAGAGAGAACGACTCCCAGTAACTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CCA 90 bp TTGACAGTACCTGAGTGGGAAACAAGGGTGTGGGGTGGGCCCTGGTaGTCTGAGGGAGAAGTGGGTGGGACCCTGCTCTTAGTTTTGGCC +
Preference number: 5 (lower is better)
Translates to: LTVPEWETRVWGGPW*SEGEVGGTLLLVLA
Trigger: GGCCAAAACTAAGAGCAGGGTCCCACCCACTTCTCCCTCAGACCACCAGGGCCCACCCCACACCCTTGTTTCCCACTCAGGTACTGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS-3UTR CAA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCTTCTCTCTGAGCTCCTaGTGCTGCTTTGGGCCCGTA +
Preference number: 5 (lower is better)
Translates to: SRQARLITPRWGVWGTCSFSLSS*CCFGPV
Trigger: TACGGGCCCAAAGCAGCACAAGGAGCTCAGAGAGAA...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTCAGCGCCAGCCCTCTaGGGGGTCTCAACCGGCAGC +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSSAPAL*GVSTGS
Trigger: GCTGCCGGTTGAGACCCCCAAGAGGGCTGGCGCTGA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCCCAGGGATGAGAGACTaGGGGGTGCCTGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSPGMRD*GVPGAS
Trigger: GGAGGCCCCAGGCACCCCCAAGTCTCTCATCCCTGG...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGACCAGGGATGAGAGACTaGGGGGTGCCTGGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LAQRGQSRQARLITPRWGPGMRD*GVPGAS
Trigger: GGAGGCCCCAGGCACCCCCAAGTCTCTCATCCCTGG...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGACAGCAGGAGTGGGTTTaGCAGCGGTGGCGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: LAQRGQSRQARLITPRWGQQEWV*QRWRQP
Trigger: GGGCTGCCGCCACCGCTGCAAAACCCACTCCTGCTG...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCCTGCGTCAGGAGGTaGAGCACAGACCATGTGGAC +
Preference number: 5 (lower is better)
Translates to: NLDKRGSSLHVGESGAPAPCVRR*STDHVD
Trigger: GTCCACATGGTCTGTGCTCAACCTCCTGACGCAGGG...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp TCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTCCTTGCGGATGAGGCTCTaGCTGATGTCCAAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: SRQARLITPRWGVWGTCSLRMRL*LMSKLP
Trigger: AGGCAGCTTGGACATCAGCAAGAGCCTCATCCGCAA...GGAGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAAGCTCATCACTCCACGTaGGGGAGTCTGGGGCACCTG +
Preference number: 5 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAEAHHST*GSLGHL
Trigger: CAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGC...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS CCA 90 bp GCCGTGGGAGCTTGGTCCTTGAGCCATCTGGAGGTCATCAGTTACTaGGAGTCGTTCTCTCTGAGCTCCTTGTGCTGCTTTGGGCCCGTA +
Preference number: 5 (lower is better)
Translates to: AVGAWSLSHLEVISY*ESFSLSSLCCFGPV
Trigger: TACGGGCCCAAAGCAGCACAAGGAGCTCAGAGAGAACGACTCCCAGTAACTGATGACCTCCAGATGGCTCAAGGACCAAGCTCCCACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CCA 90 bp GTTTTGGCCTTCAGACCCTCATCTCTAGGTGGCCACTGTCCCTCTTaGCCTTCATGCTGCAGGGAGGGAGGAACTGTGGCTACCCTGAGT +
Preference number: 5 (lower is better)
Translates to: VLAFRPSSLGGHCPS*PSCCREGGTVATLS
Trigger: ACTCAGGGTAGCCACAGTTCCTCCCTCCCTGCAGCATGAAGGCCAAGAGGGACAGTGGCCACCTAGAGATGAGGGTCTGAAGGCCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CCA 90 bp TGGGACCCTGCTCTTAGTTTTGGCCTTCAGACCCTCATCTCTAGGTaGCCACTGTCCCTCTTGGCCTTCATGCTGCAGGGAGGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: WDPALSFGLQTLISR*PLSLLAFMLQGGRN
Trigger: GTTCCTCCCTCCCTGCAGCATGAAGGCCAAGAGGGACAGTGGCCACCTAGAGATGAGGGTCTGAAGGCCAAAACTAAGAGCAGGGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGCTCCTTGTGCTGCTTaGGGCCCGTACAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSAPCAA*GPYRAG
Trigger: CCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAGC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAATCCAGCCGTGGGAGCTaGGTCCTTGAGCCATCTGGA +
Preference number: 5 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAESSRGS*VLEPSG
Trigger: TCCAGATGGCTCAAGGACCAAGCTCCCACGGCTGGA...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR CAA 90 bp AATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTCTGGGGCACCTGCTTGTGGCTACCCTGAGTaGACGTCTGGGAGTTGTGGG +
Preference number: 5 (lower is better)
Translates to: NLDKRGSSLHVGESGAPACGYPE*TSGSCG
Trigger: CCCACAACTCCCAGACGTCAACTCAGGGTAGCCACA...AGCAGGTGCCCCAGACTCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTTCCAGCACTGGCCTCTaGACAGTACCTGAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: PPCIPHKTRPLCKMPARPSSTGL*TVPEWE
Trigger: TTCCCACTCAGGTACTGTCAAGAGGCCAGTGCTGGA...AGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CAA 90 bp TGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTCGGCCTCCCAAAGGTGAAGTGGGGACCTaGAGCTGCCTCCTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: CIPHKTRPLCKMPARPPKGEVGT*SCLLQV
Trigger: CACTTGCAGGAGGCAGCTCAAGGTCCCCACTTCACC...TTTGGGAGGCCGAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295984.7
CDS-3UTR CAA 90 bp CACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAAATGCCGGCTGAACCCTGCGTCAGGAGGTaGAGCACAGACCATGTGGAC +
Preference number: 5 (lower is better)
Translates to: HPPCIPHKTRPLCKMPAEPCVRR*STDHVD
Trigger: GTCCACATGGTCTGTGCTCAACCTCCTGACGCAGGG...TTCAGCCGGCATTTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR CAA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAATGGCCACTGTCCCTCTaGGCCTTCATGCTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKWPLSL*AFMLQG
Trigger: TCCCTGCAGCATGAAGGCCAAGAGGGACAGTGGCCA...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCTGGCCACTGTCCCTCTaGGCCTTCATGCTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGWPLSL*AFMLQG
Trigger: TCCCTGCAGCATGAAGGCCAAGAGGGACAGTGGCCA...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTCCAGCCGTGGGAGCTaGGTCCTTGAGCCATCTGGA +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSSSRGS*VLEPSG
Trigger: TCCAGATGGCTCAAGGACCAAGCTCCCACGGCTGGA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTGGCCACTGTCCCTCTaGGCCTTCATGCTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSWPLSL*AFMLQG
Trigger: TCCCTGCAGCATGAAGGCCAAGAGGGACAGTGGCCA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGGTGAAGTGGGGACCTaGAGCTGCCTCCTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSGEVGT*SCLLQV
Trigger: CACTTGCAGGAGGCAGCTCAAGGTCCCCACTTCACC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTATGCTGCGGCTCAGGTaGATGGGCGATGGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: ISLAQRGQSRQARLITPRMLRLR*MGDGGR
Trigger: GCGGCCGCCATCGCCCATCAACCTGAGCCGCAGCAT...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGCTGTCCCCCGGGGGTaGCCGTCAGGTAGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHAVPRG*PSGREA
Trigger: GGCCTCTCTACCTGACGGCAACCCCCGGGGGACAGC...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS-3UTR CAA 90 bp TTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGGGGAGTGGGAGCTTGGTCCTaGAGCCATCTGGAGGTCATC +
Preference number: 5 (lower is better)
Translates to: LAQRGQSRQARLITPRWGVGAWS*SHLEVI
Trigger: GATGACCTCCAGATGGCTCAAGGACCAAGCTCCCAC...TCCCCAACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCGTGGGAGCTTGGTCCTaGAGCCATCTGGAGGTCATC +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSVGAWS*SHLEVI
Trigger: GATGACCTCCAGATGGCTCAAGGACCAAGCTCCCAC...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTGTGGCTACCCTGAGTaGACGTCTGGGAGTTGTGGG +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSCGYPE*TSGSCG
Trigger: CCCACAACTCCCAGACGTCAACTCAGGGTAGCCACA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCTCCAGCACTGGCCTCTaGACAGTACCTGAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGSSTGL*TVPEWE
Trigger: TTCCCACTCAGGTACTGTCAAGAGGCCAGTGCTGGA...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACTCAGCGCCAGCCCTCTaGGGGGTCTCAACCGGCAGC +
Preference number: 5 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHSAPAL*GVSTGS
Trigger: GCTGCCGGTTGAGACCCCCAAGAGGGCTGGCGCTGA...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCCTCTGTGCAAATTGCGGATGAGGCTCTaGCTGATGTCCAAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: RIHAHPPCIPHKTRPLCKLRMRL*LMSKLP
Trigger: AGGCAGCTTGGACATCAGCAAGAGCCTCATCCGCAA...TTTGCACAGAGGCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCAGCTCCTTGTGCTGCTTaGGGCCCGTACAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSAPCAA*GPYRAG
Trigger: CCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAGC...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTTCTCTCTGAGCTCCTaGTGCTGCTTTGGGCCCGTA +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSFSLSS*CCFGPV
Trigger: TACGGGCCCAAAGCAGCACAAGGAGCTCAGAGAGAA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCTCCAGCACTGGCCTCTaGACAGTACCTGAGTGGGAA +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSSSTGL*TVPEWE
Trigger: TTCCCACTCAGGTACTGTCAAGAGGCCAGTGCTGGA...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACCCACTCTCCGCCGGGTaGCGGATGAGGCTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHPLSAG*RMRLLL
Trigger: CAGCAAGAGCCTCATCCGCAACCCGGCGGAGAGTGG...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTCCAGCCGTGGGAGCTaGGTCCTTGAGCCATCTGGA +
Preference number: 5 (lower is better)
Translates to: ISLAQRGQSRQARLITPRSSRGS*VLEPSG
Trigger: TCCAGATGGCTCAAGGACCAAGCTCCCACGGCTGGA...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp GTTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGACCCTGCTCTTAGTTTaGGCCTTCAGACCCTCATCT +
Preference number: 5 (lower is better)
Translates to: VLHARIHAHPPCIPHKTRTLLLV*AFRPSS
Trigger: AGATGAGGGTCTGAAGGCCAAAACTAAGAGCAGGGT...CCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp TTCTTCATGCCCGAATCCATGCACACCCACCCTGTATTCCGCATAAGACACGGCACCCTGCTCTTAGTTTaGGCCTTCAGACCCTCATCT +
Preference number: 5 (lower is better)
Translates to: FFMPESMHTHPVFRIRHGTLLLV*AFRPSS
Trigger: AGATGAGGGTCTGAAGGCCAAAACTAAGAGCAGGGT...GCCGTGTCTTATGCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTTGTGGCTACCCTGAGTaGACGTCTGGGAGTTGTGGG +
Preference number: 5 (lower is better)
Translates to: ISLAQRGQSRQARLITPRCGYPE*TSGSCG
Trigger: CCCACAACTCCCAGACGTCAACTCAGGGTAGCCACA...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCACCCTGCTCTTAGTTTaGGCCTTCAGACCCTCATCT +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSTLLLV*AFRPSS
Trigger: AGATGAGGGTCTGAAGGCCAAAACTAAGAGCAGGGT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGGTGAAGTGGGGACCTaGAGCTGCCTCCTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHGEVGT*SCLLQV
Trigger: CACTTGCAGGAGGCAGCTCAAGGTCCCCACTTCACC...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCATTATCCTAGGTTGTTaGAAGGAGGCCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSIILGC*KEALGN
Trigger: GTTGCCCAGGGCCTCCTTCAAACAACCTAGGATAAT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp CCTAAGGGTTTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATTCTCTCTGAGCTCCTaGTGCTGCTTTGGGCCCGTA +
Preference number: 5 (lower is better)
Translates to: PKGLFLWHKEDNLDKRGSFSLSS*CCFGPV
Trigger: TACGGGCCCAAAGCAGCACAAGGAGCTCAGAGAGAA...TGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAAACCCTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp ATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGTGGGTTCCAACTGATCTaGAGTGAACCCCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: ISLAQRGQSRQARLITPRGFQLI*SEPLEK
Trigger: CTTCTCCAGGGGTTCACTCAAGATCAGTTGGAACCC...ACGTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS-3UTR CAA 90 bp CTAGGTTGTTTGAAGGAGGCCCTGGGCAACTCCTTTAAGGAGGTGATTGTCTCCATTTATTATCCTAGGTaGTTTGAAGGAGGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: LGCLKEALGNSFKEVIVSIYYPR*FEGGPG
Trigger: CCCAGGGCCTCCTTCAAACAACCTAGGATAATAAAT...GGAGACAATCACCTCCTTAAAGGAGTTGCCCAGGGCCTCCTTCAAACAACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411976.2
CDS-3UTR CAA 90 bp TTATTTCTTTGGCACAAAGAGGACAATCTAGACAAGCGAGGCTCATCACTCCACGGGTTCCAACTGATCTaGAGTGAACCCCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LFLWHKEDNLDKRGSSLHGFQLI*SEPLEK
Trigger: CTTCTCCAGGGGTTCACTCAAGATCAGTTGGAACCC...GTGGAGTGATGAGCCTCGCTTGTCTAGATTGTCCTCTTTGTGCCAAAGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS TCA 72 bp CGTGCTGTGGGACCGGCCCGCGCACGCGCACGTCGCTaGGCGACCTGCAGCGGCCGCGGAGGAGCGAGGAGC +
Preference number: 6 (lower is better)
Translates to: RAVGPARARARR*ATCSGRGGARS
Trigger: GCTCCTCGCTCCTCCGCGGCCGCTGCAGGTCGCTCAGCGACGTGCGCGTGCGCGGGCCGGTCCCACAGCACG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 72 bp CGCCGAAGCCACGAGCACCAGCACCGCGGCCACCAATaGCAGCCGGGGCCCTGCTGGGGCGGCTGCCAGCGC +
Preference number: 6 (lower is better)
Translates to: RRSHEHQHRGHQ*QPGPCWGGCQR
Trigger: GCGCTGGCAGCCGCCCCAGCAGGGCCCCGGCTGGCATTGGTGGCCGCGGTGCTGGTGCTCGTGGCTTCGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 72 bp GGCCGTCCAGCAGGCGGCGACGGCACAGGCAGAGCGTaGCCAGAGCCACGGCCGCGCCCCAGGCGCACGACA +
Preference number: 6 (lower is better)
Translates to: GRPAGGDGTGRA*PEPRPRPRRTT
Trigger: TGTCGTGCGCCTGGGGCGCGGCCGTGGCTCTGGGCACGCTCTGCCTGTGCCGTCGCCGCCTGCTGGACGGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 72 bp GAGGCGCTGCGGGATTCCCCAGGCTTGCCGCGCGGCTaGACCTCTCCCTGGCCGTCCCCCTGCCGAGCGGCG +
Preference number: 6 (lower is better)
Translates to: EALRDSPGLPRG*TSPWPSPCRAA
Trigger: CGCCGCTCGGCAGGGGGACGGCCAGGGAGAGGTCCAGCCGCGCGGCAAGCCTGGGGAATCCCGCAGCGCCTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 72 bp GCCGCAGCGGCTGCCCCGTCGGGTGCTTCCACTACGTaGTGTGGGACCGGCCCGCGCACGCGCACGTCGCTG +
Preference number: 6 (lower is better)
Translates to: AAAAAPSGASTT*CGTGPRTRTSL
Trigger: CAGCGACGTGCGCGTGCGCGGGCCGGTCCCACAGCACGTAGTGGAAGCACCCGACGGGGCAGCCGCTGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 72 bp CAGCACCGCGGCCACCAATGCCAGCCGGGGCCCTGCTaGGGCGGCTGCCAGCGCAGCCAGCGCCAACAACGC +
Preference number: 6 (lower is better)
Translates to: QHRGHQCQPGPC*GGCQRSQRQQR
Trigger: GCGTTGTTGGCGCTGGCTGCGCTGGCAGCCGCCCCAGCAGGGCCCCGGCTGGCATTGGTGGCCGCGGTGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 72 bp CAACAGCCGAGGGCCCGGGCTGGCATCCCAGCCCCGTaGGCCGTCCAGCAGGCGGCGACGGCACAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: QQPRARAGIPAP*AVQQAATAQAE
Trigger: CTCTGCCTGTGCCGTCGCCGCCTGCTGGACGGCCCACGGGGCTGGGATGCCAGCCCGGGCCCTCGGCTGTTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 72 bp ACCCCACCAGGCCCACGAGAAGCGGCCCACGCGGCCTaGGCCCGGGTACAGCCAGAGCGCAGCCGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: TPPGPREAAHAA*ARVQPERSRQL
Trigger: CAGCTGGCGGCTGCGCTCTGGCTGTACCCGGGCCCAGGCCGCGTGGGCCGCTTCTCGTGGGCCTGGTGGGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 72 bp CACCAGCACCGCGGCCACCAATGCCAGCCGGGGCCCTaGTGGGGCGGCTGCCAGCGCAGCCAGCGCCAACAA +
Preference number: 6 (lower is better)
Translates to: HQHRGHQCQPGP*WGGCQRSQRQQ
Trigger: TTGTTGGCGCTGGCTGCGCTGGCAGCCGCCCCAGCAGGGCCCCGGCTGGCATTGGTGGCCGCGGTGCTGGTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 72 bp GGTCCCACACCGTTGCGGGACAGTCCCGGGCCACCCTaGGGTCCGCGACCCAACGACGCAGCCGAGCCCCAG +
Preference number: 6 (lower is better)
Translates to: GPTPLRDSPGPP*GPRPNDAAEPQ
Trigger: CTGGGGCTCGGCTGCGTCGTTGGGTCGCGGACCCCAGGGTGGCCCGGGACTGTCCCGCAACGGTGTGGGACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 72 bp AGCGAGGAGCCAGCGTCGTCGAGCTCGGCTTTGGGATaGCTGCCCCGGCGCGGCCGCAGAGCGCCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: SEEPASSSSALG*LPRRGRRAPPG
Trigger: GCCTGGAGGCGCTCTGCGGCCGCGCCGGGGCAGCCATCCCAAAGCCGAGCTCGACGACGCTGGCTCCTCGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 72 bp GGAGGAGCGAGGAGCCAGCGTCGTCGAGCTCGGCTTTaGGATGGCTGCCCCGGCGCGGCCGCAGAGCGCCTC +
Preference number: 6 (lower is better)
Translates to: GGARSQRRRARL*DGCPGAAAERL
Trigger: GAGGCGCTCTGCGGCCGCGCCGGGGCAGCCATCCCAAAGCCGAGCTCGACGACGCTGGCTCCTCGCTCCTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CAA 72 bp CGGAGGAGCGAGGAGCCAGCGTCGTCGAGCTCGGCTTaGGGATGGCTGCCCCGGCGCGGCCGCAGAGCGCCT +
Preference number: 6 (lower is better)
Translates to: RRSEEPASSSSA*GWLPRRGRRAP
Trigger: AGGCGCTCTGCGGCCGCGCCGGGGCAGCCATCCCAAAGCCGAGCTCGACGACGCTGGCTCCTCGCTCCTCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 72 bp GGAGCTGCCAGAAGCCGCAGCGGCTGCCCCGTCGGGTaGTTCCACTACGTGCTGTGGGACCGGCCCGCGCAC +
Preference number: 6 (lower is better)
Translates to: GAARSRSGCPVG*FHYVLWDRPAH
Trigger: GTGCGCGGGCCGGTCCCACAGCACGTAGTGGAAGCACCCGACGGGGCAGCCGCTGCGGCTTCTGGCAGCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 72 bp GGGCGATGGCGGCCGCAGATCCAGCTCGCTCAGCGATaGCGCCGGTCCCACACCGTTGCGGGACAGTCCCGG +
Preference number: 6 (lower is better)
Translates to: GRWRPQIQLAQR*RRSHTVAGQSR
Trigger: CCGGGACTGTCCCGCAACGGTGTGGGACCGGCGCCATCGCTGAGCGAGCTGGATCTGCGGCCGCCATCGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 72 bp GGCGGCGGGGAGGCCAGGCCGCGGAGGCCGCAGCGCTaGAACACACTGTCTCGCACTAGGTGCTCGCGGAAG +
Preference number: 6 (lower is better)
Translates to: GGGEARPRRPQR*NTLSRTRCSRK
Trigger: CTTCCGCGAGCACCTAGTGCGAGACAGTGTGTTCCAGCGCTGCGGCCTCCGCGGCCTGGCCTCCCCGCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 72 bp AGCGGCTGCCCCGTCGGGTGCTTCCACTACGTGCTGTaGGACCGGCCCGCGCACGCGCACGTCGCTGAGCGA +
Preference number: 6 (lower is better)
Translates to: SGCPVGCFHYVL*DRPAHAHVAER
Trigger: TCGCTCAGCGACGTGCGCGTGCGCGGGCCGGTCCCACAGCACGTAGTGGAAGCACCCGACGGGGCAGCCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CAA 72 bp TGGATGAGCCTGCGCGCCGCAGCCCCCGTGTTCACCTaGCGCGCGTCCCTGCAGCCGATCGCCGCGCCGCAT +
Preference number: 6 (lower is better)
Translates to: WMSLRAAAPVFT*RASLQPIAAPH
Trigger: ATGCGGCGCGGCGATCGGCTGCAGGGACGCGCGCAAGGTGAACACGGGGGCTGCGGCGCGCAGGCTCATCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411976.2
ENST00000412055.6
CDS GCA 72 bp GGGCACGCCAGACGCATCAGCTTAGCCCAGCAAGCGTaGTCCGTGGGCGGCCTGGGTCTCGCGGCAGCCACC +
Preference number: 6 (lower is better)
Translates to: GHARRISLAQQA*SVGGLGLAAAT
Trigger: GGTGGCTGCCGCGAGACCCAGGCCGCCCACGGAGCACGCTTGCTGGGCTAAGCTGATGCGTCTGGCGTGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CAA 90 bp AGTCCTCACTGGATGAGCCTGCGCGCCGCAGCCCCCGTGTTCACCTaGCGCGCGTCCCTGCAGCCGATCGCCGCGCCGCATCCTCCGAGA +
Preference number: 6 (lower is better)
Translates to: SPHWMSLRAAAPVFT*RASLQPIAAPHPPR
Trigger: TCTCGGAGGATGCGGCGCGGCGATCGGCTGCAGGGACGCGCGCAAGGTGAACACGGGGGCTGCGGCGCGCAGGCTCATCCAGTGAGGACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412055.6
CDS CAA 72 bp ATGGTATCACTGGAGGCGCTGCGGGATTCCCCAGGCTaGCCGCGCGGCTGGACCTCTCCCTGGCCGTCCCCC +
Preference number: 6 (lower is better)
Translates to: MVSLEALRDSPG*PRGWTSPWPSP
Trigger: GGGGGACGGCCAGGGAGAGGTCCAGCCGCGCGGCAAGCCTGGGGAATCCCGCAGCGCCTCCAGTGATACCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS TCA 72 bp GAAGGTCAGCCTGCTTGGGCGGGGGACCTGGGGAGCTaGCTTCCCAGGACACCTCAGCGCCAGCCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: EGQPAWAGDLGS*LPRTPQRQPSW
Trigger: CCAAGAGGGCTGGCGCTGAGGTGTCCTGGGAAGTCAGCTCCCCAGGTCCCCCGCCCAAGCAGGCTGACCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS GCA 72 bp AGGCCGCAGCGCTGGAACACACTGTCTCGCACTAGGTaGTCGCGGAAGAGCGCGGCGTCGATGCTGCGGCTC +
Preference number: 6 (lower is better)
Translates to: RPQRWNTLSRTR*SRKSAASMLRL
Trigger: GAGCCGCAGCATCGACGCCGCGCTCTTCCGCGAGCACCTAGTGCGAGACAGTGTGTTCCAGCGCTGCGGCCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 72 bp GAAGCTGTCGAGGGAGCTGCCAGAAGCCGCAGCGGCTaGCCCGTCGGGTGCTTCCACTACGTGCTGTGGGAC +
Preference number: 6 (lower is better)
Translates to: EAVEGAARSRSG*PVGCFHYVLWD
Trigger: GTCCCACAGCACGTAGTGGAAGCACCCGACGGGGCAGCCGCTGCGGCTTCTGGCAGCTCCCTCGACAGCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CAA 90 bp GGCGTGGCCAGCTGCCCACTCTCCGCCGGGTTGCGGATGAGGCTCTaGCTGATGTCCAAGCTGCCTGCACCAACGTTGCTGGGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: GVASCPLSAGLRMRL*LMSKLPAPTLLGPA
Trigger: TGCAGGGCCCAGCAACGTTGGTGCAGGCAGCTTGGACATCAGCAAGAGCCTCATCCGCAACCCGGCGGAGAGTGGGCAGCTGGCCACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CAA 90 bp CAGGCGCCTGAACTGGGCGTGGCCAGCTGCCCACTCTCCGCCGGGTaGCGGATGAGGCTCTTGCTGATGTCCAAGCTGCCTGCACCAACG +
Preference number: 6 (lower is better)
Translates to: QAPELGVASCPLSAG*RMRLLLMSKLPAPT
Trigger: CGTTGGTGCAGGCAGCTTGGACATCAGCAAGAGCCTCATCCGCAACCCGGCGGAGAGTGGGCAGCTGGCCACGCCCAGTTCAGGCGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CAA 90 bp GGACCTGGGGAGCTGACTTCCCAGGACACCTCAGCGCCAGCCCTCTaGGGGGTCTCAACCGGCAGCTCCTCAGCAGGAGGAAGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: GPGELTSQDTSAPAL*GVSTGSSSAGGRLL
Trigger: CAGAAGCCTTCCTCCTGCTGAGGAGCTGCCGGTTGAGACCCCCAAGAGGGCTGGCGCTGAGGTGTCCTGGGAAGTCAGCTCCCCAGGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS TCA 72 bp CGCCCCAGGCGCACGACAAGCCCTGCGTCAGGAGGTTaGGCACAGACCATGTGGACAGCAGGTCTGTCGCGA +
Preference number: 6 (lower is better)
Translates to: RPRRTTSPASGG*AQTMWTAGLSR
Trigger: TCGCGACAGACCTGCTGTCCACATGGTCTGTGCTCAACCTCCTGACGCAGGGCTTGTCGTGCGCCTGGGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS TCA 72 bp GCAGTTATTGGGTCGCTCCGGCACCTCGCTCTTTCCTaGCGGCGCCGGGCACGCCAGACGCATCAGCTTAGC +
Preference number: 6 (lower is better)
Translates to: AVIGSLRHLALS*RRRARQTHQLS
Trigger: GCTAAGCTGATGCGTCTGGCGTGCCCGGCGCCGTCAGGAAAGAGCGAGGTGCCGGAGCGACCCAATAACTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 72 bp TGTCGCGAGCAACCCTACACCATGCACCAGCGCCACTaGTCCCAGCAGGAGTGGGTTTTGCAGCGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: CREQPYTMHQRH*SQQEWVLQRWR
Trigger: CCGCCACCGCTGCAAAACCCACTCCTGCTGGGAGCAGTGGCGCTGGTGCATGGTGTAGGGTTGCTCGCGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 72 bp CCGCTCTTCAAAGCTCGATGGTATCACTGGAGGCGCTaGGGGATTCCCCAGGCTTGCCGCGCGGCTGGACCT +
Preference number: 6 (lower is better)
Translates to: PLFKARWYHWRR*GIPQACRAAGP
Trigger: AGGTCCAGCCGCGCGGCAAGCCTGGGGAATCCCGCAGCGCCTCCAGTGATACCATCGAGCTTTGAAGAGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 72 bp TCAGCTCTGGGGTTCTCCGGGAACACGTCAAAGGCCTaGGGCTCTGAGCCCACAGAGCCCTTGGGGTGGGCT +
Preference number: 6 (lower is better)
Translates to: SALGFSGNTSKA*GSEPTEPLGWA
Trigger: AGCCCACCCCAAGGGCTCTGTGGGCTCAGAGCCCCAGGCCTTTGACGTGTTCCCGGAGAACCCCAGAGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CAA 72 bp GAGCTGACTTCCCAGGACACCTCAGCGCCAGCCCTCTaGGGGGTCTCAACCGGCAGCTCCTCAGCAGGAGGA +
Preference number: 6 (lower is better)
Translates to: ELTSQDTSAPAL*GVSTGSSSAGG
Trigger: TCCTCCTGCTGAGGAGCTGCCGGTTGAGACCCCCAAGAGGGCTGGCGCTGAGGTGTCCTGGGAAGTCAGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CAA 72 bp GAACTGGGCGTGGCCAGCTGCCCACTCTCCGCCGGGTaGCGGATGAGGCTCTTGCTGATGTCCAAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: ELGVASCPLSAG*RMRLLLMSKLP
Trigger: AGGCAGCTTGGACATCAGCAAGAGCCTCATCCGCAACCCGGCGGAGAGTGGGCAGCTGGCCACGCCCAGTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 72 bp ACAGCCCCATGGGCTGGAGGCCATGGTCTACTCCGATaGCTGGGCCTAAAGCCCCCACCTTCCAGTCCTCAC +
Preference number: 6 (lower is better)
Translates to: TAPWAGGHGLLR*LGLKPPPSSPH
Trigger: GTGAGGACTGGAAGGTGGGGGCTTTAGGCCCAGGCATCGGAGTAGACCATGGCCTCCAGCCCATGGGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CCA 72 bp CCTGGCCCTGCGTCAGGACCGCTCTTCAAAGCTCGATaGTATCACTGGAGGCGCTGCGGGATTCCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: PGPASGPLFKAR*YHWRRCGIPQA
Trigger: AGCCTGGGGAATCCCGCAGCGCCTCCAGTGATACCATCGAGCTTTGAAGAGCGGTCCTGACGCAGGGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CAA 72 bp CCTGGTGAATCCTTAGCGTCAGGAAGGTCAGCCTGCTaGGGCGGGGGACCTGGGGAGCTGACTTCCCAGGAC +
Preference number: 6 (lower is better)
Translates to: PGESLASGRSAC*GGGPGELTSQD
Trigger: GTCCTGGGAAGTCAGCTCCCCAGGTCCCCCGCCCAAGCAGGCTGACCTTCCTGACGCTAAGGATTCACCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS TCA 72 bp CAGCCCGTGGCGCCAGGGGTTCCAACTGATCTTGAGTaGACCCCTGGAGAAGCTGTCGAGGGAGCTGCCAGA +
Preference number: 6 (lower is better)
Translates to: QPVAPGVPTDLE*TPGEAVEGAAR
Trigger: TCTGGCAGCTCCCTCGACAGCTTCTCCAGGGGTTCACTCAAGATCAGTTGGAACCCCTGGCGCCACGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 72 bp GTGGACAGCAGGTCTGTCGCGAGCAACCCTACACCATaGACCAGCGCCACTGCTCCCAGCAGGAGTGGGTTT +
Preference number: 6 (lower is better)
Translates to: VDSRSVASNPTP*TSATAPSRSGF
Trigger: AAACCCACTCCTGCTGGGAGCAGTGGCGCTGGTGCATGGTGTAGGGTTGCTCGCGACAGACCTGCTGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 72 bp CTGAGCTCCTTGTGCTGCTTTGGGCCCGTACAGGGCTaGGCCAAGGGGAGAGGCTACAGGCTTCTCAGGCAT +
Preference number: 6 (lower is better)
Translates to: LSSLCCFGPVQG*AKGRGYRLLRH
Trigger: ATGCCTGAGAAGCCTGTAGCCTCTCCCCTTGGCCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CCA 72 bp CTGGGAGTCGTTCTCTCTGAGCTCCTTGTGCTGCTTTaGGCCCGTACAGGGCTGGGCCAAGGGGAGAGGCTA +
Preference number: 6 (lower is better)
Translates to: LGVVLSELLVLL*ARTGLGQGERL
Trigger: TAGCCTCTCCCCTTGGCCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAGCTCAGAGAGAACGACTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CCA 72 bp CGATCAGGAGCCTCTGAGGCGGGTGGATCCGTGGGCTaGGGTCCTGGTGAATCCTTAGCGTCAGGAAGGTCA +
Preference number: 6 (lower is better)
Translates to: RSGASEAGGSVG*GPGESLASGRS
Trigger: TGACCTTCCTGACGCTAAGGATTCACCAGGACCCCAGCCCACGGATCCACCCGCCTCAGAGGCTCCTGATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CCA 72 bp CTGCACCAACGTTGCTGGGCCCTGCATAGCAGTTATTaGGTCGCTCCGGCACCTCGCTCTTTCCTGACGGCG +
Preference number: 6 (lower is better)
Translates to: LHQRCWALHSSY*VAPAPRSFLTA
Trigger: CGCCGTCAGGAAAGAGCGAGGTGCCGGAGCGACCCAATAACTGCTATGCAGGGCCCAGCAACGTTGGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CAA 72 bp AGCTGCCCACTCTCCGCCGGGTTGCGGATGAGGCTCTaGCTGATGTCCAAGCTGCCTGCACCAACGTTGCTG +
Preference number: 6 (lower is better)
Translates to: SCPLSAGLRMRL*LMSKLPAPTLL
Trigger: CAGCAACGTTGGTGCAGGCAGCTTGGACATCAGCAAGAGCCTCATCCGCAACCCGGCGGAGAGTGGGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CAA 90 bp CTGTCCACTGATGACAGCCCGTGGCGCCAGGGGTTCCAACTGATCTaGAGTGAACCCCTGGAGAAGCTGTCGAGGGAGCTGCCAGAAGCC +
Preference number: 6 (lower is better)
Translates to: LSTDDSPWRQGFQLI*SEPLEKLSRELPEA
Trigger: GGCTTCTGGCAGCTCCCTCGACAGCTTCTCCAGGGGTTCACTCAAGATCAGTTGGAACCCCTGGCGCCACGGGCTGTCATCAGTGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS GCA 72 bp GATGTCCAAGCTGCCTGCACCAACGTTGCTGGGCCCTaGATAGCAGTTATTGGGTCGCTCCGGCACCTCGCT +
Preference number: 6 (lower is better)
Translates to: DVQAACTNVAGP*IAVIGSLRHLA
Trigger: AGCGAGGTGCCGGAGCGACCCAATAACTGCTATGCAGGGCCCAGCAACGTTGGTGCAGGCAGCTTGGACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CAA 72 bp GATGACAGCCCGTGGCGCCAGGGGTTCCAACTGATCTaGAGTGAACCCCTGGAGAAGCTGTCGAGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: DDSPWRQGFQLI*SEPLEKLSREL
Trigger: CAGCTCCCTCGACAGCTTCTCCAGGGGTTCACTCAAGATCAGTTGGAACCCCTGGCGCCACGGGCTGTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CAA 90 bp CATCTGGAGGTCATCAGTTACTGGGAGTCGTTCTCTCTGAGCTCCTaGTGCTGCTTTGGGCCCGTACAGGGCTGGGCCAAGGGGAGAGGC +
Preference number: 6 (lower is better)
Translates to: HLEVISYWESFSLSS*CCFGPVQGWAKGRG
Trigger: GCCTCTCCCCTTGGCCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAGCTCAGAGAGAACGACTCCCAGTAACTGATGACCTCCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS GCA 72 bp AGTTACTGGGAGTCGTTCTCTCTGAGCTCCTTGTGCTaGTTTGGGCCCGTACAGGGCTGGGCCAAGGGGAGA +
Preference number: 6 (lower is better)
Translates to: SYWESFSLSSLC*FGPVQGWAKGR
Trigger: TCTCCCCTTGGCCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAGCTCAGAGAGAACGACTCCCAGTAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS GCA 72 bp ATCAGTTACTGGGAGTCGTTCTCTCTGAGCTCCTTGTaGTGCTTTGGGCCCGTACAGGGCTGGGCCAAGGGG +
Preference number: 6 (lower is better)
Translates to: ISYWESFSLSSL*CFGPVQGWAKG
Trigger: CCCCTTGGCCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAGCTCAGAGAGAACGACTCCCAGTAACTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS GCA 72 bp TGCTGGATCCTGCTGGGTGAAGTGGGGACCTTGAGCTaGCTCCTGCAAGTGTTCCTCAAACCCACCCTGTCC +
Preference number: 6 (lower is better)
Translates to: CWILLGEVGTLS*LLQVFLKPTLS
Trigger: GGACAGGGTGGGTTTGAGGAACACTTGCAGGAGGCAGCTCAAGGTCCCCACTTCACCCAGCAGGATCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CCA 72 bp TGTCCTTCCAGCACTGGCCTCTTGACAGTACCTGAGTaGGAAACAAGGGTGTGGGGTGGGCCCTGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: CPSSTGLLTVPE*ETRVWGGPWWS
Trigger: AGACCACCAGGGCCCACCCCACACCCTTGTTTCCCACTCAGGTACTGTCAAGAGGCCAGTGCTGGAAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CAA 90 bp CCCTGGTGGTCTGAGGGAGAAGTGGGTGGGACCCTGCTCTTAGTTTaGGCCTTCAGACCCTCATCTCTAGGTGGCCACTGTCCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: PWWSEGEVGGTLLLV*AFRPSSLGGHCPSW
Trigger: CCAAGAGGGACAGTGGCCACCTAGAGATGAGGGTCTGAAGGCCAAAACTAAGAGCAGGGTCCCACCCACTTCTCCCTCAGACCACCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CAA 90 bp AGTTTTGGCCTTCAGACCCTCATCTCTAGGTGGCCACTGTCCCTCTaGGCCTTCATGCTGCAGGGAGGGAGGAACTGTGGCTACCCTGAG +
Preference number: 6 (lower is better)
Translates to: SFGLQTLISRWPLSL*AFMLQGGRNCGYPE
Trigger: CTCAGGGTAGCCACAGTTCCTCCCTCCCTGCAGCATGAAGGCCAAGAGGGACAGTGGCCACCTAGAGATGAGGGTCTGAAGGCCAAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS TCA 72 bp TCCAGAGGTCCTGTCCAGCCGTGGGAGCTTGGTCCTTaGGCCATCTGGAGGTCATCAGTTACTGGGAGTCGT +
Preference number: 6 (lower is better)
Translates to: SRGPVQPWELGP*AIWRSSVTGSR
Trigger: ACGACTCCCAGTAACTGATGACCTCCAGATGGCTCAAGGACCAAGCTCCCACGGCTGGACAGGACCTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CCA 72 bp TTCAGACCCTCATCTCTAGGTGGCCACTGTCCCTCTTaGCCTTCATGCTGCAGGGAGGGAGGAACTGTGGCT +
Preference number: 6 (lower is better)
Translates to: FRPSSLGGHCPS*PSCCREGGTVA
Trigger: AGCCACAGTTCCTCCCTCCCTGCAGCATGAAGGCCAAGAGGGACAGTGGCCACCTAGAGATGAGGGTCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CAA 72 bp GTCATCAGTTACTGGGAGTCGTTCTCTCTGAGCTCCTaGTGCTGCTTTGGGCCCGTACAGGGCTGGGCCAAG +
Preference number: 6 (lower is better)
Translates to: VISYWESFSLSS*CCFGPVQGWAK
Trigger: CTTGGCCCAGCCCTGTACGGGCCCAAAGCAGCACAAGGAGCTCAGAGAGAACGACTCCCAGTAACTGATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS TCA 72 bp ATCTGGAGGTCATCAGTTACTGGGAGTCGTTCTCTCTaGGCTCCTTGTGCTGCTTTGGGCCCGTACAGGGCT +
Preference number: 6 (lower is better)
Translates to: IWRSSVTGSRSL*APCAALGPYRA
Trigger: AGCCCTGTACGGGCCCAAAGCAGCACAAGGAGCTCAGAGAGAACGACTCCCAGTAACTGATGACCTCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS GCA 72 bp GTTGCGGATGAGGCTCTTGCTGATGTCCAAGCTGCCTaGACCAACGTTGCTGGGCCCTGCATAGCAGTTATT +
Preference number: 6 (lower is better)
Translates to: VADEALADVQAA*TNVAGPCIAVI
Trigger: AATAACTGCTATGCAGGGCCCAGCAACGTTGGTGCAGGCAGCTTGGACATCAGCAAGAGCCTCATCCGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295984.7
ENST00000412055.6
CDS CCA 72 bp GCTCTTAGTTTTGGCCTTCAGACCCTCATCTCTAGGTaGCCACTGTCCCTCTTGGCCTTCATGCTGCAGGGA +
Preference number: 6 (lower is better)
Translates to: ALSFGLQTLISR*PLSLLAFMLQG
Trigger: TCCCTGCAGCATGAAGGCCAAGAGGGACAGTGGCCACCTAGAGATGAGGGTCTGAAGGCCAAAACTAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CAA 72 bp TCTGAGGGAGAAGTGGGTGGGACCCTGCTCTTAGTTTaGGCCTTCAGACCCTCATCTCTAGGTGGCCACTGT +
Preference number: 6 (lower is better)
Translates to: SEGEVGGTLLLV*AFRPSSLGGHC
Trigger: ACAGTGGCCACCTAGAGATGAGGGTCTGAAGGCCAAAACTAAGAGCAGGGTCCCACCCACTTCTCCCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6
CDS CCA 72 bp GCTTGGTCCTTGAGCCATCTGGAGGTCATCAGTTACTaGGAGTCGTTCTCTCTGAGCTCCTTGTGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: AWSLSHLEVISY*ESFSLSSLCCF
Trigger: AAAGCAGCACAAGGAGCTCAGAGAGAACGACTCCCAGTAACTGATGACCTCCAGATGGCTCAAGGACCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295984.7
ENST00000411976.2
ENST00000412055.6