Pregenerated sensors for PRRT1B (Homo sapiens)
Ensembl gene IDs: ENSG00000283526Ensembl transcript IDs: ENST00000636672.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTCCCAGGAAGGCCTTGAGAGGAGGCTCCTGGGAAATGGGGCTCTaGTGGGCTCCTGTCCCACGGCTGGGGCCGGGCTCTGGAGACACC | + |
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Preference number: 1 (lower is better) Translates to: SPRKALRGGSWEMGL*WAPVPRLGPGSGDT Trigger: GGTGTCTCCAGAGCCCGGCCCCAGCCGTGGGACAGGAGCCCACCAGAGCCCCATTTCCCAGGAGCCTCCTCTCAAGGCCTTCCTGGGACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR CCA 90 bp | GGTGGGCTCCTGTCCCACGGCTGGGGCCGGGCTCTGGAGACACCTTaGATTAGGACACTGACTGAGGCTCCAGTGGGCCACCTGTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: GGLLSHGWGRALETP*IRTLTEAPVGHLWR Trigger: CCTCCACAGGTGGCCCACTGGAGCCTCAGTCAGTGTCCTAATCCAAGGTGTCTCCAGAGCCCGGCCCCAGCCGTGGGACAGGAGCCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR CCA 90 bp | GATGAAGGCAAGAGGAGTCCCAGGAAGGCCTTGAGAGGAGGCTCCTaGGAAATGGGGCTCTGGTGGGCTCCTGTCCCACGGCTGGGGCCG | + |
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Preference number: 1 (lower is better) Translates to: DEGKRSPRKALRGGS*EMGLWWAPVPRLGP Trigger: CGGCCCCAGCCGTGGGACAGGAGCCCACCAGAGCCCCATTTCCCAGGAGCCTCCTCTCAAGGCCTTCCTGGGACTCCTCTTGCCTTCATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR CCA 90 bp | GCAAGAGCTGGCCACCGGCAGGGATCTGAGTCCAGAGAAAGGGTCTaGCCCGGCCAGTTTTCCGTGGACATTCCGGCATCCGGCATCTCC | + |
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Preference number: 1 (lower is better) Translates to: ARAGHRQGSESRERV*PGQFSVDIPASGIS Trigger: GGAGATGCCGGATGCCGGAATGTCCACGGAAAACTGGCCGGGCCAGACCCTTTCTCTGGACTCAGATCCCTGCCGGTGGCCAGCTCTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR TCA 90 bp | CCCCAGATTCCCTCTGCAGGCAAGAGCTGGCCACCGGCAGGGATCTaGGTCCAGAGAAAGGGTCTGGCCCGGCCAGTTTTCCGTGGACAT | + |
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Preference number: 1 (lower is better) Translates to: PQIPSAGKSWPPAGI*VQRKGLARPVFRGH Trigger: ATGTCCACGGAAAACTGGCCGGGCCAGACCCTTTCTCTGGACTCAGATCCCTGCCGGTGGCCAGCTCTTGCCTGCAGAGGGAATCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR GCA 90 bp | TTGAGGGCTGCCAAGCCTGCCCTCTTCTGGCCCCCAGATTCCCTCTaGAGGCAAGAGCTGGCCACCGGCAGGGATCTGAGTCCAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: LRAAKPALFWPPDSL*RQELATGRDLSPEK Trigger: TTTCTCTGGACTCAGATCCCTGCCGGTGGCCAGCTCTTGCCTGCAGAGGGAATCTGGGGGCCAGAAGAGGGCAGGCTTGGCAGCCCTCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR TCA 90 bp | ACAGAGAAGGCTTTGGTCCCTACGATGGCCTCCCAAGAGCACAGATaGAGGCAAGAGGAGTCCCAGGAAGGCCTTGAGAGGAGGCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: TEKALVPTMASQEHR*RQEESQEGLERRLL Trigger: CAGGAGCCTCCTCTCAAGGCCTTCCTGGGACTCCTCTTGCCTTCATCTGTGCTCTTGGGAGGCCATCGTAGGGACCAAAGCCTTCTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGTCCCACGGCTGGGGCCGGGCTCTGGAGACACCTTGGATTAGGACACTGGAGGGCTGCCAAGCCTaGCCTCTTCTGGCCCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LLSHGWGRALETPWIRTLEGCQA*PLLAPR Trigger: TCTGGGGGCCAGAAGAGGGCAGGCTTGGCAGCCCTC...CAGTGTCCTAATCCAAGGTGTCTCCAGAGCCCGGCCCCAGCCGTGGGACAGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGACACCTTGGATTAGGACACTGACTGAGGCTCCAGTGGGCCACCTGTGGTCCAGAGAAAGGGTCTaGCCCGGCCAGTTTTCCGTG | + |
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Preference number: 2 (lower is better) Translates to: LETPWIRTLTEAPVGHLWSRERV*PGQFSV Trigger: CACGGAAAACTGGCCGGGCCAGACCCTTTCTCTGGA...CCACAGGTGGCCCACTGGAGCCTCAGTCAGTGTCCTAATCCAAGGTGTCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR-3UTR TCA 90 bp | AGACAGAGAAGGCTTTGGTCCCTACGATGGCCTCCCAAGAGCACAGATGAAGGCGTCCCAGGAAGGCCTTaGGAGGAGGCTCCTGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: RQRRLWSLRWPPKSTDEGVPGRP*EEAPGK Trigger: TTTCCCAGGAGCCTCCTCTCAAGGCCTTCCTGGGAC...GCCTTCATCTGTGCTCTTGGGAGGCCATCGTAGGGACCAAAGCCTTCTCTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR CCA 72 bp | AAGGCCTTGAGAGGAGGCTCCTGGGAAATGGGGCTCTaGTGGGCTCCTGTCCCACGGCTGGGGCCGGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: KALRGGSWEMGL*WAPVPRLGPGS Trigger: AGAGCCCGGCCCCAGCCGTGGGACAGGAGCCCACCAGAGCCCCATTTCCCAGGAGCCTCCTCTCAAGGCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR GCA 72 bp | GCCAAGCCTGCCCTCTTCTGGCCCCCAGATTCCCTCTaGAGGCAAGAGCTGGCCACCGGCAGGGATCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: AKPALFWPPDSL*RQELATGRDLS Trigger: ACTCAGATCCCTGCCGGTGGCCAGCTCTTGCCTGCAGAGGGAATCTGGGGGCCAGAAGAGGGCAGGCTTGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR TCA 72 bp | CCCTCTGCAGGCAAGAGCTGGCCACCGGCAGGGATCTaGGTCCAGAGAAAGGGTCTGGCCCGGCCAGTTTTC | + |
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Preference number: 3 (lower is better) Translates to: PSAGKSWPPAGI*VQRKGLARPVF Trigger: GAAAACTGGCCGGGCCAGACCCTTTCTCTGGACTCAGATCCCTGCCGGTGGCCAGCTCTTGCCTGCAGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR CCA 72 bp | GGCCACCGGCAGGGATCTGAGTCCAGAGAAAGGGTCTaGCCCGGCCAGTTTTCCGTGGACATTCCGGCATCC | + |
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Preference number: 3 (lower is better) Translates to: GHRQGSESRERV*PGQFSVDIPAS Trigger: GGATGCCGGAATGTCCACGGAAAACTGGCCGGGCCAGACCCTTTCTCTGGACTCAGATCCCTGCCGGTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR CCA 72 bp | AGTCCAGAGAAAGGGTCTGGCCCGGCCAGTTTTCCGTaGACATTCCGGCATCCGGCATCTCCGCAGGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: SPEKGSGPASFP*TFRHPASPQEP Trigger: TGGCTCCTGCGGAGATGCCGGATGCCGGAATGTCCACGGAAAACTGGCCGGGCCAGACCCTTTCTCTGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| 3UTR TCA 72 bp | GCTTTGGTCCCTACGATGGCCTCCCAAGAGCACAGATaGAGGCAAGAGGAGTCCCAGGAAGGCCTTGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: ALVPTMASQEHR*RQEESQEGLER Trigger: CCTCTCAAGGCCTTCCTGGGACTCCTCTTGCCTTCATCTGTGCTCTTGGGAGGCCATCGTAGGGACCAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR GCA 90 bp | CGGCCAGTTTTCCGTGGACATTCCGGCATCCGGCATCTCCGCAGGAGCCACAGCCGGGCCGGCTCCGCTTaGGCCGCGGGCTCAGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: RPVFRGHSGIRHLRRSHSRAGSA*AAGSGF Trigger: GAAACCTGAGCCCGCGGCGCAAGCGGAGCCGGCCCG...GCTGTGGCTCCTGCGGAGATGCCGGATGCCGGAATGTCCACGGAAAACTGGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CCA 90 bp | AGAGCTGGCCACCGGCAGGGATCTGAGTCCAGAGAAAGGGTCTGGCCCGGCCAGGCCTGTGCTCCACCGTaGCAGGGCCTGGCACGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RAGHRQGSESRERVWPGQACAPP*QGLARQ Trigger: CTGGCGTGCCAGGCCCTGCCACGGTGGAGCACAGGC...CTGGCCGGGCCAGACCCTTTCTCTGGACTCAGATCCCTGCCGGTGGCCAGCTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR GCA 90 bp | CCAGAGAAAGGGTCTGGCCCGGCCAGTTTTCCGTGGACATTCCGGCATCCGGCAGCAGACGGCGCGGGCTaGAGGACCACGGGCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: PEKGSGPASFPWTFRHPAADGAG*RTTGTC Trigger: GCAGGTGCCCGTGGTCCTGCAGCCCGCGCCGTCTGC...TGCCGGATGCCGGAATGTCCACGGAAAACTGGCCGGGCCAGACCCTTTCTCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR GCA 90 bp | CAGGCAAGAGCTGGCCACCGGCAGGGATCTGAGTCCAGAGAAAGGGTCTGGCCCGGGCCAGGTCACCCCTaGCCAGTGCTGCACGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QARAGHRQGSESRERVWPGPGHP*PVLHGP Trigger: AGGCCCGTGCAGCACTGGGCAGGGGTGACCTGGCCC...GGGCCAGACCCTTTCTCTGGACTCAGATCCCTGCCGGTGGCCAGCTCTTGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CCA 90 bp | CAAGAGCTGGCCACCGGCAGGGATCTGAGTCCAGAGAAAGGGTCTGGCCCGGCCCTCCTGTCCCACGGCTaGGGCCGGGCTCTGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: QELATGRDLSPEKGSGPALLSHG*GRALET Trigger: TGTCTCCAGAGCCCGGCCCCAGCCGTGGGACAGGAG...GGCCGGGCCAGACCCTTTCTCTGGACTCAGATCCCTGCCGGTGGCCAGCTCTTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR GCA 90 bp | CAGGCAAGAGCTGGCCACCGGCAGGGATCTGAGTCCAGAGAAAGGGTCTGGCCCAGGACCACGGGCACCTaGGGGAAGGGCGGGTACAGC | + |
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Preference number: 4 (lower is better) Translates to: QARAGHRQGSESRERVWPRTTGT*GKGGYS Trigger: GCTGTACCCGCCCTTCCCGCAGGTGCCCGTGGTCCT...GGGCCAGACCCTTTCTCTGGACTCAGATCCCTGCCGGTGGCCAGCTCTTGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR GCA 90 bp | CGGCCAGTTTTCCGTGGACATTCCGGCATCCGGCATCTCCGCAGGAGCCACAGCACCCCTGCCCAGTGCTaGACGGGCCTCGTGGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: RPVFRGHSGIRHLRRSHSTPAQC*TGLVGV Trigger: TACTCCCACGAGGCCCGTGCAGCACTGGGCAGGGGT...GCTGTGGCTCCTGCGGAGATGCCGGATGCCGGAATGTCCACGGAAAACTGGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR GCA 90 bp | AGGCAAGAGCTGGCCACCGGCAGGGATCTGAGTCCAGAGAAAGGGTCTGGCCCGTTTCGTGTCGGACCCTaGCCCTCCAGCTCCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RQELATGRDLSPEKGSGPFRVGP*PSSSCL Trigger: GAGGCAGGAGCTGGAGGGGCAGGGTCCGACACGAAA...CGGGCCAGACCCTTTCTCTGGACTCAGATCCCTGCCGGTGGCCAGCTCTTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR GCA 90 bp | CAGGCAAGAGCTGGCCACCGGCAGGGATCTGAGTCCAGAGAAAGGGTCTGGCCCCCCCCAGATTCCCTCTaGAGGCAAGAGCTGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: QARAGHRQGSESRERVWPPPDSL*RQELAT Trigger: GGTGGCCAGCTCTTGCCTGCAGAGGGAATCTGGGGG...GGGCCAGACCCTTTCTCTGGACTCAGATCCCTGCCGGTGGCCAGCTCTTGCCTG 64% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR GCA 90 bp | CCAGAGAAAGGGTCTGGCCCGGCCAGTTTTCCGTGGACATTCCGGCATCCGGCAGAGGGCTGCCAAGCCTaGCCTCTTCTGGCCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PEKGSGPASFPWTFRHPAEGCQA*PLLAPR Trigger: TCTGGGGGCCAGAAGAGGGCAGGCTTGGCAGCCCTC...TGCCGGATGCCGGAATGTCCACGGAAAACTGGCCGGGCCAGACCCTTTCTCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CCA 90 bp | CAAGAGCTGGCCACCGGCAGGGATCTGAGTCCAGAGAAAGGGTCTGGCCCGGCCCCGGCCAGTTTTCCGTaGACATTCCGGCATCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: QELATGRDLSPEKGSGPAPASFP*TFRHPA Trigger: TGCCGGATGCCGGAATGTCCACGGAAAACTGGCCGG...GGCCGGGCCAGACCCTTTCTCTGGACTCAGATCCCTGCCGGTGGCCAGCTCTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CCA 90 bp | AAGGGTCTGGCCCGGCCAGTTTTCCGTGGACATTCCGGCATCCGGCATCTCCGCGAGGCTCCTGGGAAATaGGGCTCTGGTGGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KGLARPVFRGHSGIRHLREAPGK*GSGGLL Trigger: CAGGAGCCCACCAGAGCCCCATTTCCCAGGAGCCTC...GCGGAGATGCCGGATGCCGGAATGTCCACGGAAAACTGGCCGGGCCAGACCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR GCA 90 bp | CTGGAGACACCTTGGATTAGGACACTGACTGAGGCTCCAGTGGGCCACCTGTGGGTCACCCCTGCCCAGTaGTGCACGGGCCTCGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LETPWIRTLTEAPVGHLWVTPAQ*CTGLVG Trigger: TCCCACGAGGCCCGTGCAGCACTGGGCAGGGGTGAC...CCACAGGTGGCCCACTGGAGCCTCAGTCAGTGTCCTAATCCAAGGTGTCTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CCA 90 bp | AGACAGAGAAGGCTTTGGTCCCTACGATGGCCTCCCAAGAGCACAGATGAAGGCAGAGCGCGGGCGGCGTaGGCGCGGCTGGGTAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: RQRRLWSLRWPPKSTDEGRARAA*ARLGRA Trigger: AGCTCTACCCAGCCGCGCCCACGCCGCCCGCGCTCT...GCCTTCATCTGTGCTCTTGGGAGGCCATCGTAGGGACCAAAGCCTTCTCTGTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR TCA 90 bp | CCAGAGAAAGGGTCTGGCCCGGCCAGTTTTCCGTGGACATTCCGGCATCCGGCACCACCGGCAGGGATCTaGGTCCAGAGAAAGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: PEKGSGPASFPWTFRHPAPPAGI*VQRKGL Trigger: CAGACCCTTTCTCTGGACTCAGATCCCTGCCGGTGG...TGCCGGATGCCGGAATGTCCACGGAAAACTGGCCGGGCCAGACCCTTTCTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR TCA 90 bp | AAGGGTCTGGCCCGGCCAGTTTTCCGTGGACATTCCGGCATCCGGCATCTCCGCCTTGGATTAGGACACTaGCTGAGGCTCCAGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: KGLARPVFRGHSGIRHLRLGLGH*LRLQWA Trigger: GGCCCACTGGAGCCTCAGTCAGTGTCCTAATCCAAG...GCGGAGATGCCGGATGCCGGAATGTCCACGGAAAACTGGCCGGGCCAGACCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CCA 90 bp | CGGCCAGTTTTCCGTGGACATTCCGGCATCCGGCATCTCCGCAGGAGCCACAGCTCCAGAGAAAGGGTCTaGCCCGGCCAGTTTTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: RPVFRGHSGIRHLRRSHSSRERV*PGQFSV Trigger: CACGGAAAACTGGCCGGGCCAGACCCTTTCTCTGGA...GCTGTGGCTCCTGCGGAGATGCCGGATGCCGGAATGTCCACGGAAAACTGGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CCA 90 bp | CCCCCAGATTCCCTCTGCAGGCAAGAGCTGGCCACCGGCAGGGATCTGAGTCCATTGAGAGGAGGCTCCTaGGAAATGGGGCTCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PPDSLCRQELATGRDLSPLRGGS*EMGLWW Trigger: CCACCAGAGCCCCATTTCCCAGGAGCCTCCTCTCAA...TGGACTCAGATCCCTGCCGGTGGCCAGCTCTTGCCTGCAGAGGGAATCTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR TCA 90 bp | CAAGAGCTGGCCACCGGCAGGGATCTGAGTCCAGAGAAAGGGTCTGGCCCGGCCGAGGGTCACCAGCACTaGCTCCATCATGTAGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: QELATGRDLSPEKGSGPAEGHQH*LHHVVL Trigger: AAGGACTACATGATGGAGTCAGTGCTGGTGACCCTC...GGCCGGGCCAGACCCTTTCTCTGGACTCAGATCCCTGCCGGTGGCCAGCTCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CCA 90 bp | CCCCCAGATTCCCTCTGCAGGCAAGAGCTGGCCACCGGCAGGGATCTGAGTCCAAGACAGAGAAGGCTTTaGTCCCTACGATGGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PPDSLCRQELATGRDLSPRQRRL*SLRWPP Trigger: GGGAGGCCATCGTAGGGACCAAAGCCTTCTCTGTCT...TGGACTCAGATCCCTGCCGGTGGCCAGCTCTTGCCTGCAGAGGGAATCTGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR TCA 90 bp | GAAGACAGAGAAGGCTTTGGTCCCTACGATGGCCTCCCAAGAGCACAGATGAAGCCCCGAAGAGCAGGCTaGAGAGCACCAGCGAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: EDREGFGPYDGLPRAQMKPRRAG*RAPASG Trigger: CCCGCTCGCTGGTGCTCTTCAGCCTGCTCTTCGGGG...CTTCATCTGTGCTCTTGGGAGGCCATCGTAGGGACCAAAGCCTTCTCTGTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR GCA 90 bp | CAGGCAAGAGCTGGCCACCGGCAGGGATCTGAGTCCAGAGAAAGGGTCTGGCCCTCAGGGAAGGTAGAGTaGCACCACCACGTAGATGAC | + |
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Preference number: 4 (lower is better) Translates to: QARAGHRQGSESRERVWPSGKVE*HHHVDD Trigger: GTCATCTACGTGGTGGTGGCACTCTACCTTCCCTGA...GGGCCAGACCCTTTCTCTGGACTCAGATCCCTGCCGGTGGCCAGCTCTTGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR GCA 90 bp | TCCAGAGAAAGGGTCTGGCCCGGCCAGTTTTCCGTGGACATTCCGGCATCCGGCAAGTCAGTTGAGGGCTaGCAAGCCTGCCCTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SRERVWPGQFSVDIPASGKSVEG*QACPLL Trigger: CAGAAGAGGGCAGGCTTGGCAGCCCTCAACTGACTT...GCCGGATGCCGGAATGTCCACGGAAAACTGGCCGGGCCAGACCCTTTCTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR TCA 90 bp | GGCGGAGGTTGCAGTGTCCTTCCAGATGGCTCTGAAGACAGAGAAGGCTTTGGTGTCCCAGGAAGGCCTTaGGAGGAGGCTCCTGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GGGCSVLPDGSEDREGFGVPGRP*EEAPGK Trigger: TTTCCCAGGAGCCTCCTCTCAAGGCCTTCCTGGGAC...ACCAAAGCCTTCTCTGTCTTCAGAGCCATCTGGAAGGACACTGCAACCTCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CCA 90 bp | GAAGACAGAGAAGGCTTTGGTCCCTACGATGGCCTCCCAAGAGCACAGATGAAGTGGGAAATGGGGCTCTaGTGGGCTCCTGTCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: EDREGFGPYDGLPRAQMKWEMGL*WAPVPR Trigger: CCGTGGGACAGGAGCCCACCAGAGCCCCATTTCCCA...CTTCATCTGTGCTCTTGGGAGGCCATCGTAGGGACCAAAGCCTTCTCTGTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CCA 90 bp | TGGGGCCGGGCTCTGGAGACACCTTGGATTAGGACACTGACTGAGGCTCCAGTGCTTTGGTCCCTACGATaGCCTCCCAAGAGCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: WGRALETPWIRTLTEAPVLWSLR*PPKSTD Trigger: ATCTGTGCTCTTGGGAGGCCATCGTAGGGACCAAAG...CACTGGAGCCTCAGTCAGTGTCCTAATCCAAGGTGTCTCCAGAGCCCGGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CCA 90 bp | GAAGACAGAGAAGGCTTTGGTCCCTACGATGGCCTCCCAAGAGCACAGATGAAGGCTGGGGCCGGGCTCTaGAGACACCTTGGATTAGGA | + |
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Preference number: 4 (lower is better) Translates to: EDREGFGPYDGLPRAQMKAGAGL*RHLGLG Trigger: TCCTAATCCAAGGTGTCTCCAGAGCCCGGCCCCAGC...CTTCATCTGTGCTCTTGGGAGGCCATCGTAGGGACCAAAGCCTTCTCTGTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CCA 90 bp | AGACAGAGAAGGCTTTGGTCCCTACGATGGCCTCCCAAGAGCACAGATGAAGGCGCTCTGGAGACACCTTaGATTAGGACACTGACTGAG | + |
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Preference number: 4 (lower is better) Translates to: RQRRLWSLRWPPKSTDEGALETP*IRTLTE Trigger: CTCAGTCAGTGTCCTAATCCAAGGTGTCTCCAGAGC...GCCTTCATCTGTGCTCTTGGGAGGCCATCGTAGGGACCAAAGCCTTCTCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS GCA 90 bp | CCAGCTCCTGCCTCCATGGTCCGAGCCCGCGGCGGCTGCAAGGGCTaGGCGGCTCCCTGGCCCGGCGCCTGCCGTCGGGCCGGCTCCGCT | + |
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Preference number: 5 (lower is better) Translates to: PAPASMVRARGGCKG*AAPWPGACRRAGSA Trigger: AGCGGAGCCGGCCCGACGGCAGGCGCCGGGCCAGGGAGCCGCGCAGCCCTTGCAGCCGCCGCGGGCTCGGACCATGGAGGCAGGAGCTGG 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CAA 90 bp | CTGGAGACACCTTGGATTAGGACACTGACTGAGGCTCCAGTGGGCCACCTGTGGTCGGGCCGGCTCCGCTaGCGCCGCGGGCTCAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LETPWIRTLTEAPVGHLWSGRLR*RRGLRF Trigger: AAACCTGAGCCCGCGGCGCAAGCGGAGCCGGCCCGA...CCACAGGTGGCCCACTGGAGCCTCAGTCAGTGTCCTAATCCAAGGTGTCTCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS CCA 90 bp | CTGACTCCATCATGTAGTCCTTTGGCAGGGGCCTGTGCTCCACCGTaGCAGGGCCTGGCACGCCAGCCATCGGGCCATTGTACACGGGGA | + |
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Preference number: 5 (lower is better) Translates to: LTPSCSPLAGACAPP*QGLARQPSGHCTRG Trigger: TCCCCGTGTACAATGGCCCGATGGCTGGCGTGCCAGGCCCTGCCACGGTGGAGCACAGGCCCCTGCCAAAGGACTACATGATGGAGTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS CCA 90 bp | AGGGATCTGAGTCCAGAGAAAGGGTCTGGCCCGGCCAGTTTTCCGTaGACATTCCGGCATCCGGCATCTCCGCAGGAGCCACAGCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: RDLSPEKGSGPASFP*TFRHPASPQEPQPQ Trigger: CTGAGGCTGTGGCTCCTGCGGAGATGCCGGATGCCGGAATGTCCACGGAAAACTGGCCGGGCCAGACCCTTTCTCTGGACTCAGATCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS TCA 90 bp | GGCGATGAGACCGGTGAGCAGACAGCAGAAGAGGGTCACCAGCACTaGCTCCATCATGTAGTCCTTTGGCAGGGGCCTGTGCTCCACCGT | + |
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Preference number: 5 (lower is better) Translates to: GDETGEQTAEEGHQH*LHHVVLWQGPVLHR Trigger: ACGGTGGAGCACAGGCCCCTGCCAAAGGACTACATGATGGAGTCAGTGCTGGTGACCCTCTTCTGCTGTCTGCTCACCGGTCTCATCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CAA 90 bp | TGGGGCCGGGCTCTGGAGACACCTTGGATTAGGACACTGACTGAGGCTCCAGTGCCATCATGTAGTCCTTaGGCAGGGGCCTGTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: WGRALETPWIRTLTEAPVPSCSP*AGACAP Trigger: TGGAGCACAGGCCCCTGCCAAAGGACTACATGATGG...CACTGGAGCCTCAGTCAGTGTCCTAATCCAAGGTGTCTCCAGAGCCCGGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS-3UTR CAA 90 bp | GAAGACAGAGAAGGCTTTGGTCCCTACGATGGCCTCCCAAGAGCACAGATGAAGAAGACAGAGAAGGCTTaGGTCCCTACGATGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: EDREGFGPYDGLPRAQMKKTEKA*VPTMAS Trigger: GGAGGCCATCGTAGGGACCAAAGCCTTCTCTGTCTT...CTTCATCTGTGCTCTTGGGAGGCCATCGTAGGGACCAAAGCCTTCTCTGTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS CCA 72 bp | CCTGCGGGAAGGGCGGGTACAGCAGCGGCGCGGCCTTaGGGTCCGGCGGCGCGTAGGGCGGGGGCTCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: PAGRAGTAAARP*GPAARRAGAPQ Trigger: TTGGGGAGCCCCCGCCCTACGCGCCGCCGGACCCCAAGGCCGCGCCGCTGCTGTACCCGCCCTTCCCGCAGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS GCA 72 bp | AGCGCAGACGGCGCGGGCTGCAGGACCACGGGCACCTaGGGGAAGGGCGGGTACAGCAGCGGCGCGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SADGAGCRTTGT*GKGGYSSGAAL Trigger: CAAGGCCGCGCCGCTGCTGTACCCGCCCTTCCCGCAGGTGCCCGTGGTCCTGCAGCCCGCGCCGTCTGCGCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS CCA 72 bp | ACCAGCGAGCGGGCCTTCCGCGAGGCCTCCTCAGCCTaGGCCAGGTCACCCCTGCCCAGTGCTGCACGGGCC | + |
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Preference number: 6 (lower is better) Translates to: TSERAFREASSA*ARSPLPSAARA Trigger: GGCCCGTGCAGCACTGGGCAGGGGTGACCTGGCCCAGGCTGAGGAGGCCTCGCGGAAGGCCCGCTCGCTGGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS GCA 72 bp | TCCGCGAGGCCTCCTCAGCCTGGGCCAGGTCACCCCTaGCCAGTGCTGCACGGGCCTCGTGGGAGTAGACGA | + |
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Preference number: 6 (lower is better) Translates to: SARPPQPGPGHP*PVLHGPRGSRR Trigger: TCGTCTACTCCCACGAGGCCCGTGCAGCACTGGGCAGGGGTGACCTGGCCCAGGCTGAGGAGGCCTCGCGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS CCA 72 bp | TCATGTAGTCCTTTGGCAGGGGCCTGTGCTCCACCGTaGCAGGGCCTGGCACGCCAGCCATCGGGCCATTGT | + |
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Preference number: 6 (lower is better) Translates to: SCSPLAGACAPP*QGLARQPSGHC Trigger: ACAATGGCCCGATGGCTGGCGTGCCAGGCCCTGCCACGGTGGAGCACAGGCCCCTGCCAAAGGACTACATGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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| CDS TCA 72 bp | ACCGGTGAGCAGACAGCAGAAGAGGGTCACCAGCACTaGCTCCATCATGTAGTCCTTTGGCAGGGGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: TGEQTAEEGHQH*LHHVVLWQGPV Trigger: CACAGGCCCCTGCCAAAGGACTACATGATGGAGTCAGTGCTGGTGACCCTCTTCTGCTGTCTGCTCACCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636672.1 |
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