RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRRG3 (Homo sapiens)

Ensembl gene IDs: ENSG00000130032

Ensembl transcript IDs: ENST00000370353.3, ENST00000370354.5, ENST00000448324.1, ENST00000448726.5, ENST00000538575.5, ENST00000652529.1, ENST00000674374.1, ENST00000674441.1, ENST00000674457.1

Found 915 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCCGGGGCTGACTGCTCAGCACTGCGTCTCCCTCAGCCAGGGCTaGACGCAGCTGTGTGGGTGGTGTGTACACGCCAGGCACCTGTGC +
Preference number: 1 (lower is better)
Translates to: LPGLTAQHCVSLSQG*TQLCGWCVHARHLC
Trigger: GCACAGGTGCCTGGCGTGTACACACCACCCACACAGCTGCGTCCAGCCCTGGCTGAGGGAGACGCAGTGCTGAGCAGTCAGCCCCGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CCA 90 bp CAGCACTGCGTCTCCCTCAGCCAGGGCTGGACGCAGCTGTGTGGGTaGTGTGTACACGCCAGGCACCTGTGCACCCCACTCTTGCACTTG +
Preference number: 1 (lower is better)
Translates to: QHCVSLSQGWTQLCG*CVHARHLCTPLLHL
Trigger: CAAGTGCAAGAGTGGGGTGCACAGGTGCCTGGCGTGTACACACCACCCACACAGCTGCGTCCAGCCCTGGCTGAGGGAGACGCAGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CCA 90 bp TGCTCAGCACTGCGTCTCCCTCAGCCAGGGCTGGACGCAGCTGTGTaGGTGGTGTGTACACGCCAGGCACCTGTGCACCCCACTCTTGCA +
Preference number: 1 (lower is better)
Translates to: CSALRLPQPGLDAAV*VVCTRQAPVHPTLA
Trigger: TGCAAGAGTGGGGTGCACAGGTGCCTGGCGTGTACACACCACCCACACAGCTGCGTCCAGCCCTGGCTGAGGGAGACGCAGTGCTGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CCA 90 bp AAAACCCCAGCCACAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTaGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGC +
Preference number: 1 (lower is better)
Translates to: KTPATGWSGPSWWPH*GRDTSLLTGSTSQG
Trigger: GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTGTGGCTGGGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR GCA 90 bp CAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTaGTCAGTCAGCCTCCAACGGGCCTGTGAGGTAGGGGGAAGGATG +
Preference number: 1 (lower is better)
Translates to: QTSLAPRQFKHFAGI*SVSLQRACEVGGRM
Trigger: CATCCTTCCCCCTACCTCACAGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR GCA 90 bp AAGGACACATGTTGCCCTCCATGGGCCAGGCCTTGGGCCTCTTCCTaGTCTCTCCCATTACCACCCAGCTGCAACTCAGATGCCAAAGGC +
Preference number: 1 (lower is better)
Translates to: KDTCCPPWARPWASS*SLPLPPSCNSDAKG
Trigger: GCCTTTGGCATCTGAGTTGCAGCTGGGTGGTAATGGGAGAGAGCAGGAAGAGGCCCAAGGCCTGGCCCATGGAGGGCAACATGTGTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR GCA 90 bp GGCCTCTTCCTGCTCTCTCCCATTACCACCCAGCTGCAACTCAGATaGCAAAGGCAGCGGGCATTTCTTGGCAAACTCCCTTTGGCTCTG +
Preference number: 1 (lower is better)
Translates to: GLFLLSPITTQLQLR*QRQRAFLGKLPLAL
Trigger: CAGAGCCAAAGGGAGTTTGCCAAGAAATGCCCGCTGCCTTTGGCATCTGAGTTGCAGCTGGGTGGTAATGGGAGAGAGCAGGAAGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR GCA 90 bp AACTTTGGGGGTTGGGTGTCCAATATAGTTAATGCCACGTTTCCTTaGTCAGGGCCCTGTCATCAGGCTACTCAGCCCTGCGAGGGGAGG +
Preference number: 1 (lower is better)
Translates to: NFGGWVSNIVNATFP*SGPCHQATQPCEGR
Trigger: CCTCCCCTCGCAGGGCTGAGTAGCCTGATGACAGGGCCCTGAGCAAGGAAACGTGGCATTAACTATATTGGACACCCAACCCCCAAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 90 bp CCTCCAGCCAGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTaGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAA +
Preference number: 1 (lower is better)
Translates to: PPASPTAPRPGLWTF*PQSTQWGYSFGIRE
Trigger: TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACTGGCTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR CCA 90 bp GATGGAGACGGAAGTAGGGGGAGGTGGTATCAACAGTGTCTAGCATaGTCACTGACAGTTAAAGGGCAGGTGCCTTCTGCCCCACTGCTG +
Preference number: 1 (lower is better)
Translates to: DGDGSRGRWYQQCLA*SLTVKGQVPSAPLL
Trigger: CAGCAGTGGGGCAGAAGGCACCTGCCCTTTAACTGTCAGTGACCATGCTAGACACTGTTGATACCACCTCCCCCTACTTCCGTCTCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 90 bp GTAAGCAAGGACAGAAATCACAGAACTGTGGAGGGTAAGGGGTGCTaGAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTA +
Preference number: 1 (lower is better)
Translates to: VSKDRNHRTVEGKGC*KAGFLPLPLRPRAL
Trigger: TAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCACCCCTTACCCTCCACAGTTCTGTGATTTCTGTCCTTGCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR TCA 90 bp TTAAAGGGCAGGTGCCTTCTGCCCCACTGCTGTCCAAAGCCTCACTaGAAACAGACTGGCACCTGGCAACAGCAGAGCAAACCCCATATG +
Preference number: 1 (lower is better)
Translates to: LKGRCLLPHCCPKPH*KQTGTWQQQSKPHM
Trigger: CATATGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGACAGCAGTGGGGCAGAAGGCACCTGCCCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 90 bp CAGGGAGCTCTGGAAAGGGAGGACGAGAGGATGGAAAGGGTCAACTaGCGGGAGATTGACTCTCCAAGTGGAGACTCAACATCAGAGGCA +
Preference number: 1 (lower is better)
Translates to: QGALEREDERMERVN*REIDSPSGDSTSEA
Trigger: TGCCTCTGATGTTGAGTCTCCACTTGGAGAGTCAATCTCCCGTCAGTTGACCCTTTCCATCCTCTCGTCCTCCCTTTCCAGAGCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 90 bp AGAATGTCACCTGCATTCACCAGCATCTCTGGCATCAGGGAGCTCTaGAAAGGGAGGACGAGAGGATGGAAAGGGTCAACTGACGGGAGA +
Preference number: 1 (lower is better)
Translates to: RMSPAFTSISGIREL*KGRTRGWKGSTDGR
Trigger: TCTCCCGTCAGTTGACCCTTTCCATCCTCTCGTCCTCCCTTTCCAGAGCTCCCTGATGCCAGAGATGCTGGTGAATGCAGGTGACATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 90 bp AACACAGCTGGTCCACATGTCTGGAGAGACAAGCACACTAGAAACTaGATGGCAGAGTCCACGTGGGCCCCTTGGTCAATGTGGAAGAGG +
Preference number: 1 (lower is better)
Translates to: NTAGPHVWRDKHTRN*MAESTWAPWSMWKR
Trigger: CCTCTTCCACATTGACCAAGGGGCCCACGTGGACTCTGCCATTCAGTTTCTAGTGTGCTTGTCTCTCCAGACATGTGGACCAGCTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 90 bp AATGTGCTGCAGAAACCATCCCAGAGACCGTGGTGCAACCCCACCTaGCAGAACACCATGAAGCATCTGAACCGAACATCACAGGCCTTA +
Preference number: 1 (lower is better)
Translates to: NVLQKPSQRPWCNPT*QNTMKHLNRTSQAL
Trigger: TAAGGCCTGTGATGTTCGGTTCAGATGCTTCATGGTGTTCTGCCAGGTGGGGTTGCACCACGGTCTCTGGGATGGTTTCTGCAGCACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 90 bp GTCCCAATCCTGAAGATCTGTGTTAATGCTCGGGCTGGGGGTGGGTaGAGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAA +
Preference number: 1 (lower is better)
Translates to: VPILKICVNARAGGG*RAGTVQQSDISTVK
Trigger: TTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCTTCACCCACCCCCAGCCCGAGCATTAACACAGATCTTCAGGATTGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CCA 90 bp AAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATaGAGCTGCTTTGTCTTCTTCCAAAGCCTTTTTCAAGGAGGCAAA +
Preference number: 1 (lower is better)
Translates to: KGRVSGGCIGWRPAE*SCFVFFQSLFQGGK
Trigger: TTTGCCTCCTTGAAAAAGGCTTTGGAAGAAGACAAAGCAGCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 90 bp CCTGCGAGGGGAGGTGACATTCCTCTTTTCAGACCGGATCCCTCCTaGTACAAATATAGCTGCACACCGGCTATTGTTTCAGATAAGCAA +
Preference number: 1 (lower is better)
Translates to: PARGGDIPLFRPDPS*YKYSCTPAIVSDKQ
Trigger: TTGCTTATCTGAAACAATAGCCGGTGTGCAGCTATATTTGTACCAGGAGGGATCCGGTCTGAAAAGAGGAATGTCACCTCCCCTCGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 90 bp ATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTTTaGACACAGCTGGTCCACATGTCTGGAGAGACAAGCACACTAGAA +
Preference number: 1 (lower is better)
Translates to: MHHSQKVGSCQWVVV*TQLVHMSGETSTLE
Trigger: TTCTAGTGTGCTTGTCTCTCCAGACATGTGGACCAGCTGTGTTCAAACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 90 bp TCCAAAGCCTTTTTCAAGGAGGCAAACAGTGACAACTTTGGGGGTTaGGTGTCCAATATAGTTAATGCCACGTTTCCTTGCTCAGGGCCC +
Preference number: 1 (lower is better)
Translates to: SKAFFKEANSDNFGG*VSNIVNATFPCSGP
Trigger: GGGCCCTGAGCAAGGAAACGTGGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTTGAAAAAGGCTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 90 bp TCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAAGCCAGTTCCTaGTGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGA +
Preference number: 1 (lower is better)
Translates to: STQWGYSFGIREASS*WKDRMLEAWGSSQR
Trigger: TCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAACTGGCTTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR TCA 90 bp TTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTaGGGTCAGGAGGATGGAGACGGAAGTAGGGGGAGGTGGTATCAA +
Preference number: 1 (lower is better)
Translates to: LLQFLKHHRGEMVWC*GQEDGDGSRGRWYQ
Trigger: TTGATACCACCTCCCCCTACTTCCGTCTCCATCCTCCTGACCTCAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 90 bp CCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTaGCATAAGAGAAGCCAGTTCCTGATGGAAAGACAGGATGTTGGA +
Preference number: 1 (lower is better)
Translates to: PVDILATINSMGLFL*HKRSQFLMERQDVG
Trigger: TCCAACATCCTGTCTTTCCATCAGGAACTGGCTTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR TCA 90 bp ATCAGAAGCAAGTTTGTCTGTTGCCCCCAGGCTCCAATGAAATGCTaGCATATACTGAATGTACAGATTTCCCAGCTGACAAGGGTCAAC +
Preference number: 1 (lower is better)
Translates to: IRSKFVCCPQAPMKC*HILNVQISQLTRVN
Trigger: GTTGACCCTTGTCAGCTGGGAAATCTGTACATTCAGTATATGTCAGCATTTCATTGGAGCCTGGGGGCAACAGACAAACTTGCTTCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR TCA 90 bp TCTTCTCCTGAGATGCGCACCATCGTTAAGGAGAAATCCTCAATCTaGAGTTCAATTTCAATGCACCATTCGCAAAAAGTAGGCTCATGC +
Preference number: 1 (lower is better)
Translates to: SSPEMRTIVKEKSSI*SSISMHHSQKVGSC
Trigger: GCATGAGCCTACTTTTTGCGAATGGTGCATTGAAATTGAACTTCAGATTGAGGATTTCTCCTTAACGATGGTGCGCATCTCAGGAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 90 bp AGTGAAACAACTGTTGAGGCATTGAGCTTGAGAGGGTGTGCTATTTaGGTATGTTTGTCAGATAAATTCTTGCTAGAGAGAGACTCGCTG +
Preference number: 1 (lower is better)
Translates to: SETTVEALSLRGCAI*VCLSDKFLLERDSL
Trigger: CAGCGAGTCTCTCTCTAGCAAGAATTTATCTGACAAACATACCCAAATAGCACACCCTCTCAAGCTCAATGCCTCAACAGTTGTTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR GCA 90 bp CAGAGTTTGAAAAGATATGTACAGGGCATTCATAAAATCCAAGTGTaGATCGCAAGGAGTGATGCCTGCTGTGTGCTGTACAGTCTTTTT +
Preference number: 1 (lower is better)
Translates to: QSLKRYVQGIHKIQV*IARSDACCVLYSLF
Trigger: AAAAAGACTGTACAGCACACAGCAGGCATCACTCCTTGCGATGCACACTTGGATTTTATGAATGCCCTGTACATATCTTTTCAAACTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 90 bp TTTTATGTAGCCAGAATCACAGCTACTGTGAATTGTCTTAAGTTGTaGTTTTCTCGAAGTTCTGAAGTAGTGGGCTTCAAATTAATGGGC +
Preference number: 1 (lower is better)
Translates to: FYVARITATVNCLKL*FSRSSEVVGFKLMG
Trigger: GCCCATTAATTTGAAGCCCACTACTTCAGAACTTCGAGAAAATCACAACTTAAGACAATTCACAGTAGCTGTGATTCTGGCTACATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR TCA 90 bp CATATACTGAATGTACAGATTTCCCAGCTGACAAGGGTCAACACATaGATACAAGCACAGTTTAAAGTGGTATCAAAATTAATCCATTTC +
Preference number: 1 (lower is better)
Translates to: HILNVQISQLTRVNT*IQAQFKVVSKLIHF
Trigger: GAAATGGATTAATTTTGATACCACTTTAAACTGTGCTTGTATTCATGTGTTGACCCTTGTCAGCTGGGAAATCTGTACATTCAGTATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CAA 90 bp GTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTaGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCC +
Preference number: 2 (lower is better)
Translates to: VGGLGVIPKSWALWP*ALPGGFDSCVVPTP
Trigger: GGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR TCA 90 bp TGTGCCCGGCGCGACTGGCTAGGTACCGGTTCTGAGCATAGGAGGGGTGGTGACCACATACATGGCATCTaGGCTCTGCGAGGGGTCTCG +
Preference number: 2 (lower is better)
Translates to: CARRDWLGTGSEHRRGGDHIHGI*ALRGVS
Trigger: CGAGACCCCTCGCAGAGCTCAGATGCCATGTATGTG...GTCACCACCCCTCCTATGCTCAGAACCGGTACCTAGCCAGTCGCGCCGGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370354.5
3UTR-3UTR GCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAAGGGGGCTTCGACTCATaGGTGGTCCCTACCCCCACC +
Preference number: 2 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQGGFDS*VVPTPT
Trigger: GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCC...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR GCA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGGGGGCTTCGACTCATaGGTGGTCCCTACCCCCACC +
Preference number: 2 (lower is better)
Translates to: APRQFKHFAGICSVSLQRGGFDS*VVPTPT
Trigger: GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCC...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR GCA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCTGGAAGAGGAAACTCTaGCACCCAGCCCTCTGGCCC +
Preference number: 2 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGWKRKL*HPALWP
Trigger: GGGCCAGAGGGCTGGGTGGCAGAGTTTCCTCTTCCA...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGCTTCGACTCATGCGTaGTCCCTACCCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: GGLGVIPKSWALWPLALPASTHA*SLPPPS
Trigger: GGAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGC...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp GTGCTGAAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACGGGCACTTTGGCCTTTaGCTCTTCCCGGGGGCTTCG +
Preference number: 2 (lower is better)
Translates to: VLKGWLPSLTPEAQSSRHGHFGL*LFPGAS
Trigger: CGAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCC...GTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCTCCAGAAGTCCTCTGTaGCCTGAAGGCAGGGCTGCA +
Preference number: 2 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFSRSPL*PEGRAA
Trigger: TGCAGCCCTGCCTTCAGGCCACAGAGGACTTCTGGA...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CAA 90 bp ACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTaGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: TGCWRLGGHPKELGT*AFGSSRGLRLMRGP
Trigger: GGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR GCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTGGGGGCTTCGACTCATaGGTGGTCCCTACCCCCACC +
Preference number: 2 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPGGFDS*VVPTPT
Trigger: GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCC...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCGCTTCGACTCATGCGTaGTCCCTACCCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICASTHA*SLPPPS
Trigger: GGAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGC...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATGCTTCGACTCATGCGTaGTCCCTACCCCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYASTHA*SLPPPS
Trigger: GGAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGC...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCGGGCACTTTGGCCTTTaGCTCTTCCCGGGGGCTTCG +
Preference number: 2 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICGHFGL*LFPGAS
Trigger: CGAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCC...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCGGGAGGACGAGAGGATaGAAAGGGTCAACTGACGGG +
Preference number: 2 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSGRTRG*KGSTDG
Trigger: CCCGTCAGTTGACCCTTTCCATCCTCTCGTCCTCCC...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp GTGCTGAAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACCCCAGGCCAGGCCTGTaGACATTCTGGCCACAATCA +
Preference number: 2 (lower is better)
Translates to: VLKGWLPSLTPEAQSSRHPRPGL*TFWPQS
Trigger: TGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGG...GTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTGGGGTGCTGAAAGGCTaGCTTCCTTCCCTTACCCCT +
Preference number: 2 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPGVLKG*LPSLTP
Trigger: AGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCACCCC...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCAAACAGACTGGCACCTaGCAACAGCAGAGCAAACCC +
Preference number: 2 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFKQTGT*QQQSKP
Trigger: GGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTT...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR TCA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCGAGGGTAAGGGGTGCTaGAAGGCTGGCTTCCTTCCC +
Preference number: 2 (lower is better)
Translates to: SEPNITGLKQPPVTLPTAEGKGC*KAGFLP
Trigger: GGGAAGGAAGCCAGCCTTTCAGCACCCCTTACCCTC...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR TCA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCCAGTGGGTAGTGGTTTaGACACAGCTGGTCCACATG +
Preference number: 2 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSQWVVV*TQLVHM
Trigger: CATGTGGACCAGCTGTGTTCAAACCACTACCCACTG...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR TCA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCTGTCCAAAGCCTCACTaGAAACAGACTGGCACCTGG +
Preference number: 2 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGCPKPH*KQTGTW
Trigger: CCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGACA...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR TCA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCCAACTGACGGGAGATTaGCTCTCCAAGTGGAGACTC +
Preference number: 2 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSQLTGD*LSKWRL
Trigger: GAGTCTCCACTTGGAGAGTCAATCTCCCGTCAGTTG...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp AGACTGGCACCTGGCAACAGCAGAGCAAACCCCATATGGGCCTTCAACCCCAGGGGAAAGACAGGATGTTaGAGGCTTGGGGGTCATCCC +
Preference number: 2 (lower is better)
Translates to: RLAPGNSRANPIWAFNPRGKTGC*RLGGHP
Trigger: GGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCC...CCTGGGGTTGAAGGCCCATATGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCCCCAGGCCAGGCCTGTaGACATTCTGGCCACAATCA +
Preference number: 2 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICPRPGL*TFWPQS
Trigger: TGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGG...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCTGGAGTGGTCCAAGCTaGTGGCCTCACTGGGGTAGG +
Preference number: 2 (lower is better)
Translates to: SEPNITGLKQPPVTLPTAWSGPS*WPHWGR
Trigger: CCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCA...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CAA 90 bp GATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTaGGGCACTTTGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATG +
Preference number: 2 (lower is better)
Translates to: DGKTGCWRLGGHPKE*GTLAFGSSRGLRLM
Trigger: CATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR TCA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCAAGCACACTAGAAACTaGATGGCAGAGTCCACGTGG +
Preference number: 2 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGKHTRN*MAESTW
Trigger: CCACGTGGACTCTGCCATTCAGTTTCTAGTGTGCTT...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR GCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAAGGGGGCTTCGACTCATaGGTGGTCCCTACCCCCACC +
Preference number: 2 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQGGFDS*VVPTPT
Trigger: GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCC...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR GCA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCCTGAAGGACACATGTTaGCCTCCATGGGCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: SEPNITGLKQPPVTLPTALKDTC*PPWARP
Trigger: AGGCCTGGCCCATGGAGGGCAACATGTGTCCTTCAG...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR GCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAAGGCTGGGGGTTGCGATaGTCCACCCACTGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQGWGLR*STHWER
Trigger: CCTCTCCCAGTGGGTGGAGCATCGCAACCCCCAGCC...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CCA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGAAACAGACTGGCACCTaGCAACAGCAGAGCAAACCC +
Preference number: 2 (lower is better)
Translates to: APRQFKHFAGICSVSLQRKQTGT*QQQSKP
Trigger: GGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTT...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCAGTGGTCCAAGCTGGTaGCCTCACTGGGGTAGGGAC +
Preference number: 2 (lower is better)
Translates to: QVETQHQRHMRASAKTAPSGPSW*PHWGRD
Trigger: GTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACT...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCACCCCAGCCACAGGGTaGAGTGGTCCAAGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: CPGVLRFLSAADTHRTEATPATG*SGPSWW
Trigger: CCACCAGCTTGGACCACTCCACCCTGTGGCTGGGGT...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CCACTCTTGCACTTGTGCTTTCATTTTGAAAACCGGAGGCGATGGGAAGCGGGGCACAGAACAGAAGCCTaGGCCAGGGGCACCATGCCA +
Preference number: 2 (lower is better)
Translates to: PLLHLCFHFENRRRWEAGHRTEA*ARGTMP
Trigger: TGGCATGGTGCCCCTGGCCCAGGCTTCTGTTCTGTG...CCCCGCTTCCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAGTGCAAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CCA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTAGGATGTTGGAGGCTTaGGGGTCATCCCAAAGAGTT +
Preference number: 2 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGRMLEA*GSSQRV
Trigger: AACTCTTTGGGATGACCCCCAAGCCTCCAACATCCT...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAAAGGATGTTGGAGGCTTaGGGGTCATCCCAAAGAGTT +
Preference number: 2 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQRMLEA*GSSQRV
Trigger: AACTCTTTGGGATGACCCCCAAGCCTCCAACATCCT...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTGGCCTGTGGACATTCTaGCCACAATCAACTCAATGG +
Preference number: 2 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPGLWTF*PQSTQW
Trigger: CCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCC...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACGGGGTGCTGAAAGGCTaGCTTCCTTCCCTTACCCCT +
Preference number: 2 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHGVLKG*LPSLTP
Trigger: AGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCACCCC...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCGAAATCACAGAACTGTaGAGGGTAAGGGGTGCTGAA +
Preference number: 2 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSEITEL*RVRGAE
Trigger: TTCAGCACCCCTTACCCTCCACAGTTCTGTGATTTC...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCGAAATCACAGAACTGTaGAGGGTAAGGGGTGCTGAA +
Preference number: 2 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGEITEL*RVRGAE
Trigger: TTCAGCACCCCTTACCCTCCACAGTTCTGTGATTTC...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR TCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTAGAGAAGCCAGTTCCTaGTGGAAAGACAGGATGTTG +
Preference number: 2 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPREASS*WKDRML
Trigger: CAACATCCTGTCTTTCCATCAGGAACTGGCTTCTCT...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR TCA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGAGAGAAGCCAGTTCCTaGTGGAAAGACAGGATGTTG +
Preference number: 2 (lower is better)
Translates to: SHSPQARPVDILATINSMREASS*WKDRML
Trigger: CAACATCCTGTCTTTCCATCAGGAACTGGCTTCTCT...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR GCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAATGGAAGAGGAAACTCTaGCACCCAGCCCTCTGGCCC +
Preference number: 2 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQWKRKL*HPALWP
Trigger: GGGCCAGAGGGCTGGGTGGCAGAGTTTCCTCTTCCA...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR GCA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCAATAGACGCAGGCCATaGATTCTTGCACCACACAAA +
Preference number: 2 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSNRRRP*ILAPHK
Trigger: TTTGTGTGGTGCAAGAATGCATGGCCTGCGTCTATT...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR GCA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCCCATTACCACCCAGCTaGAACTCAGATGCCAAAGGC +
Preference number: 2 (lower is better)
Translates to: SEPNITGLKQPPVTLPTAPLPPS*NSDAKG
Trigger: GCCTTTGGCATCTGAGTTGCAGCTGGGTGGTAATGG...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR GCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAACACGCCAGGCACCTGTaGACCCCACTCTTGCACTTG +
Preference number: 2 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQHARHL*TPLLHL
Trigger: CAAGTGCAAGAGTGGGGTGCACAGGTGCCTGGCGTG...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CCA 90 bp GTTCTGAGCATAGGAGGGGTGGTGACGGGTCGCTTTCTGCAGCTGGCACCTCCAAGAGTAGACTGCATTTaGGTACCCTTTCCAGAACTC +
Preference number: 2 (lower is better)
Translates to: VLSIGGVVTGRFLQLAPPRVDCI*VPFPEL
Trigger: GAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCT...TGGAGGTGCCAGCTGCAGAAAGCGACCCGTCACCACCCCTCCTATGCTCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
3UTR-3UTR CCA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCGGAAAGACAGGATGTTaGAGGCTTGGGGGTCATCCC +
Preference number: 2 (lower is better)
Translates to: QVETQHQRHMRASAKTAPGKTGC*RLGGHP
Trigger: GGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCC...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CCACTCTTGCACTTGTGCTTTCATTTTGAAAACCGGAGGCGATGGGAAGCGGGGCTCCTTCCAGGAGTGTaGGGACAGGTTTTAGGGGAG +
Preference number: 2 (lower is better)
Translates to: PLLHLCFHFENRRRWEAGLLPGV*GQVLGE
Trigger: CTCCCCTAAAACCTGTCCCCACACTCCTGGAAGGAG...CCCCGCTTCCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAGTGCAAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CAA 90 bp TGGCATCTGAGCTCTGCGAGGGGTCTCGGACAGAGTAGACTGCATTaGGGTACCCTTTCCAGAACTCCATTTTATCTGCTCCGTGATGGC +
Preference number: 2 (lower is better)
Translates to: WHLSSARGLGQSRLH*GTLSRTPFYLLRDG
Trigger: GCCATCACGGAGCAGATAAAATGGAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTGTCCGAGACCCCTCGCAGAGCTCAGATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370354.5
3UTR CAA 90 bp TGGAAAGGGAGGACGAGAGGATGGAAAGGGTCAACTGACGGGAGATaGACTCTCCAAGTGGAGACTCAACATCAGAGGCATATGAGGGCC +
Preference number: 2 (lower is better)
Translates to: WKGRTRGWKGSTDGR*TLQVETQHQRHMRA
Trigger: GGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTGGAGAGTCAATCTCCCGTCAGTTGACCCTTTCCATCCTCTCGTCCTCCCTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CAA 90 bp CTCGCTGCCCACAGTCTGAAAGGAAAAGCTCCCACGTTTGAATATTaGGAGGCGAATGATGGAGCGGCCAGTCTGACAGCGAAGCATCTG +
Preference number: 2 (lower is better)
Translates to: LAAHSLKGKAPTFEY*EANDGAASLTAKHL
Trigger: CAGATGCTTCGCTGTCAGACTGGCCGCTCCATCATTCGCCTCCAAATATTCAAACGTGGGAGCTTTTCCTTTCAGACTGTGGGCAGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR TCA 90 bp CCACTCTTGCACTTGTGCTTTCATTTTGAAAACCGGAGGCGATGGGAAGCGGGGTGTCCAAAGCCTCACTaGAAACAGACTGGCACCTGG +
Preference number: 2 (lower is better)
Translates to: PLLHLCFHFENRRRWEAGCPKPH*KQTGTW
Trigger: CCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGACA...CCCCGCTTCCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAGTGCAAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR GCA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCCAGTTAAAGGGCAGGTaGCTTCTGCCCCACTGCTGT +
Preference number: 2 (lower is better)
Translates to: CPGVLRFLSAADTHRTEAQLKGR*LLPHCC
Trigger: ACAGCAGTGGGGCAGAAGGCACCTGCCCTTTAACTG...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAACCCAGGCCAGGCCTGTaGACATTCTGGCCACAATCA +
Preference number: 2 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQPRPGL*TFWPQS
Trigger: TGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGG...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CCA 90 bp TCCAAAGCCTCACTGAAAACAGACTGGCACCTGGCAACAGCAGAGCAAACCCCAGCCCCTTGGTCAATGTaGAAGAGGAAACTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: SKASLKTDWHLATAEQTPAPWSM*KRKLCH
Trigger: GTGGCAGAGTTTCCTCTTCCACATTGACCAAGGGGC...TGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAAATGGCAGAGTCCACGTaGGCCCCTTGGTCAATGTGG +
Preference number: 2 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQMAEST*APWSMW
Trigger: CCACATTGACCAAGGGGCCCACGTGGACTCTGCCAT...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CCA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCGATTTTAAATTGCTGTaGTTGCCAATAGACGCAGGC +
Preference number: 2 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSDFKLL*LPIDAG
Trigger: GCCTGCGTCTATTGGCAACCACAGCAATTTAAAATC...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR TCA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCCAACTGACGGGAGATTaGCTCTCCAAGTGGAGACTC +
Preference number: 2 (lower is better)
Translates to: CPGVLRFLSAADTHRTEAQLTGD*LSKWRL
Trigger: GAGTCTCCACTTGGAGAGTCAATCTCCCGTCAGTTG...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR GCA 90 bp GATGACAATCAGCAGTGCCACCCCCAGAAGGGGTACCACCACATACATGGCATCTCGGACAGAGTAGACTaGATTTGGGTACCCTTTCCA +
Preference number: 2 (lower is better)
Translates to: DDNQQCHPQKGYHHIHGISDRVD*IWVPFP
Trigger: TGGAAAGGGTACCCAAATGCAGTCTACTCTGTCCGA...GATGCCATGTATGTGGTGGTACCCCTTCTGGGGGTGGCACTGCTGATTGTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370354.5
3UTR-3UTR GCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAACACTTCGCAGGCATTTaGTCAGTCAGCCTCCAACGG +
Preference number: 2 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQHFAGI*SVSLQR
Trigger: CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTG...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CCA 90 bp GCTTTCTGCAGCTGGCACCTCCAGATGATGAACAAGGCGATGACAATCAGCAGTGTACCACCACATACATaGCATCTGAGCTCTGCGAGG +
Preference number: 2 (lower is better)
Translates to: AFCSWHLQMMNKAMTISSVPPHT*HLSSAR
Trigger: CCTCGCAGAGCTCAGATGCCATGTATGTGGTGGTAC...ACTGCTGATTGTCATCGCCTTGTTCATCATCTGGAGGTGCCAGCTGCAGAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370354.5
3UTR-3UTR CCA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCGACAACTTTGGGGGTTaGGTGTCCAATATAGTTAAT +
Preference number: 2 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSDNFGG*VSNIVN
Trigger: ATTAACTATATTGGACACCCAACCCCCAAAGTTGTC...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAAAAGATCAACTCTGGCTaGGGGTTGCGATGCTCCACC +
Preference number: 2 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQKINSG*GLRCST
Trigger: GGTGGAGCATCGCAACCCCCAGCCAGAGTTGATCTT...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CAA 90 bp CATAAGAGAAGCCAGTTCCTGATGGAAAGACAGGATGTTGGAGGCTaGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTT +
Preference number: 2 (lower is better)
Translates to: HKRSQFLMERQDVGG*GVIPKSWALWPLAL
Trigger: AAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAACTGGCTTCTCTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR TCA 90 bp TCCAAAGCCTCACTGAAAACAGACTGGCACCTGGCAACAGCAGAGCAAACCCCAAGAGAAGCCAGTTCCTaGTGGAAAGACAGGATGTTG +
Preference number: 2 (lower is better)
Translates to: SKASLKTDWHLATAEQTPREASS*WKDRML
Trigger: CAACATCCTGTCTTTCCATCAGGAACTGGCTTCTCT...TGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR TCA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCAAGCACACTAGAAACTaGATGGCAGAGTCCACGTGG +
Preference number: 2 (lower is better)
Translates to: CPGVLRFLSAADTHRTEAKHTRN*MAESTW
Trigger: CCACGTGGACTCTGCCATTCAGTTTCTAGTGTGCTT...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR TCA 90 bp AAGGAGGCAAACAGTGACAACTTTGGGGGTTGGGTGTCCAATATAGTTAATGCCCCCTGCGAGGGGAGGTaGCATTCCTCTTTTCAGACC +
Preference number: 2 (lower is better)
Translates to: KEANSDNFGGWVSNIVNAPCEGR*HSSFQT
Trigger: GGTCTGAAAAGAGGAATGTCACCTCCCCTCGCAGGG...GGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGCCACAATCAACTCAATaGGGTTATTCCTTTGGCATA +
Preference number: 2 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQPQSTQ*GYSFGI
Trigger: TATGCCAAAGGAATAACCCCATTGAGTTGATTGTGG...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCATTCACCAGCATCTCTaGCATCAGGGAGCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: CPGVLRFLSAADTHRTEAIHQHL*HQGALE
Trigger: TTCCAGAGCTCCCTGATGCCAGAGATGCTGGTGAAT...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAATGGTGCAACCCCACCTaGCAGAACACCATGAAGCAT +
Preference number: 2 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQWCNPT*QNTMKH
Trigger: ATGCTTCATGGTGTTCTGCCAGGTGGGGTTGCACCA...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR TCA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGAGAAATCCTCAATCTaGAGTTCAATTTCAATGCAC +
Preference number: 2 (lower is better)
Translates to: APRQFKHFAGICSVSLQREKSSI*SSISMH
Trigger: GTGCATTGAAATTGAACTTCAGATTGAGGATTTCTC...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR GCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAAGCAAGGAGTGATGCCTaGTGTGTGCTGTACAGTCTT +
Preference number: 2 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQARSDA*CVLYSL
Trigger: AAGACTGTACAGCACACAGCAGGCATCACTCCTTGC...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CCA 90 bp AAGGAGGCAAACAGTGACAACTTTGGGGGTTGGGTGTCCAATATAGTTAATGCCGGAAAGACAGGATGTTaGAGGCTTGGGGGTCATCCC +
Preference number: 2 (lower is better)
Translates to: KEANSDNFGGWVSNIVNAGKTGC*RLGGHP
Trigger: GGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCC...GGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCGATTTTAAATTGCTGTaGTTGCCAATAGACGCAGGC +
Preference number: 2 (lower is better)
Translates to: SEPNITGLKQPPVTLPTADFKLL*LPIDAG
Trigger: GCCTGCGTCTATTGGCAACCACAGCAATTTAAAATC...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCAGCTTGTCAGCTCAGTaGATTTTAAATTGCTGTGGT +
Preference number: 2 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICSLSAQ*ILNCCG
Trigger: ACCACAGCAATTTAAAATCCACTGAGCTGACAAGCT...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CAA 90 bp AATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTTaGAACACAGCTGGTCCACATGTCTGGAGAGACAAGCACACTAGA +
Preference number: 2 (lower is better)
Translates to: NAPFAKSRLMPVGSG*NTAGPHVWRDKHTR
Trigger: TCTAGTGTGCTTGTCTCTCCAGACATGTGGACCAGCTGTGTTCAAACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR TCA 90 bp GATTTTAAATTGCTGTGGTTGCCAATAGACGCAGGCCATGCATTCTTGCACCACCAGTGGGTAGTGGTTTaGACACAGCTGGTCCACATG +
Preference number: 2 (lower is better)
Translates to: DFKLLWLPIDAGHAFLHHQWVVV*TQLVHM
Trigger: CATGTGGACCAGCTGTGTTCAAACCACTACCCACTG...GTGGTGCAAGAATGCATGGCCTGCGTCTATTGGCAACCACAGCAATTTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR GCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAACCTGCAGAATGGAGCTaGTTTGTCTTCTTCCAAAGC +
Preference number: 2 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQPAEWS*FVFFQS
Trigger: GCTTTGGAAGAAGACAAAGCAGCTCCATTCTGCAGG...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACAGGATGTTGGAGGCTTaGGGGTCATCCCAAAGAGTT +
Preference number: 2 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNRMLEA*GSSQRV
Trigger: AACTCTTTGGGATGACCCCCAAGCCTCCAACATCCT...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAGGATGTTGGAGGCTTaGGGGTCATCCCAAAGAGTT +
Preference number: 2 (lower is better)
Translates to: RPVDILATINSMGLFLWHRMLEA*GSSQRV
Trigger: AACTCTTTGGGATGACCCCCAAGCCTCCAACATCCT...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp TTCAATTTCAATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTCTCCTTCCAGGAGTGTaGGGACAGGTTTTAGGGGAG +
Preference number: 2 (lower is better)
Translates to: FNFNAPFAKSRLMPVGSGLLPGV*GQVLGE
Trigger: CTCCCCTAAAACCTGTCCCCACACTCCTGGAAGGAG...ACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCATTGAAATTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAAGGAAAGACAGGATGTTaGAGGCTTGGGGGTCATCCC +
Preference number: 2 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREGKTGC*RLGGHP
Trigger: GGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCC...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp GTTTCCACTGTCACAAATTCACAATGTCAGAGCAAAATAACAGATGTGTTCAGGGGGAGGACGAGAGGATaGAAAGGGTCAACTGACGGG +
Preference number: 2 (lower is better)
Translates to: VSTVTNSQCQSKITDVFRGRTRG*KGSTDG
Trigger: CCCGTCAGTTGACCCTTTCCATCCTCTCGTCCTCCC...CCTGAACACATCTGTTATTTTGCTCTGACATTGTGAATTTGTGACAGTGGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CCA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGCCCAGGCCAGGCCTGTaGACATTCTGGCCACAATCA +
Preference number: 2 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLPRPGL*TFWPQS
Trigger: TGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGG...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGGGGGTGCTGAAAGGCTaGCTTCCTTCCCTTACCCCT +
Preference number: 2 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLGVLKG*LPSLTP
Trigger: AGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCACCCC...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR GCA 90 bp AAGGAGGCAAACAGTGACAACTTTGGGGGTTGGGTGTCCAATATAGTTAATGCCTGGTACAAATATAGCTaGACACCGGCTATTGTTTCA +
Preference number: 2 (lower is better)
Translates to: KEANSDNFGGWVSNIVNAWYKYS*TPAIVS
Trigger: TGAAACAATAGCCGGTGTGCAGCTATATTTGTACCA...GGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CAA 90 bp GCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTaGAGAGGGTGTGCTATTTGGGTATGTTTGTCAGATAAATTCTTG +
Preference number: 2 (lower is better)
Translates to: AVRYQYSETTVEALS*RGCAIWVCLSDKFL
Trigger: CAAGAATTTATCTGACAAACATACCCAAATAGCACACCCTCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CCA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGGCTGGTCCACATGTCTaGAGAGACAAGCACACTAGA +
Preference number: 2 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLAGPHV*RDKHTR
Trigger: TCTAGTGTGCTTGTCTCTCCAGACATGTGGACCAGC...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp GTTTCCACTGTCACAAATTCACAATGTCAGAGCAAAATAACAGATGTGTTCAGGCAACAGTGTCTAGCATaGTCACTGACAGTTAAAGGG +
Preference number: 2 (lower is better)
Translates to: VSTVTNSQCQSKITDVFRQQCLA*SLTVKG
Trigger: CCCTTTAACTGTCAGTGACCATGCTAGACACTGTTG...CCTGAACACATCTGTTATTTTGCTCTGACATTGTGAATTTGTGACAGTGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CCA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGGAAATCACAGAACTGTaGAGGGTAAGGGGTGCTGAA +
Preference number: 2 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLEITEL*RVRGAE
Trigger: TTCAGCACCCCTTACCCTCCACAGTTCTGTGATTTC...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CCA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGCAACAGTGTCTAGCATaGTCACTGACAGTTAAAGGG +
Preference number: 2 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLQQCLA*SLTVKG
Trigger: CCCTTTAACTGTCAGTGACCATGCTAGACACTGTTG...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CAA 90 bp AAGAGTCAGCATTGTATCAAATCCACCTCCATACAAACACAGAGTTaGAAAAGATATGTACAGGGCATTCATAAAATCCAAGTGTGCATC +
Preference number: 2 (lower is better)
Translates to: KSQHCIKSTSIQTQS*KRYVQGIHKIQVCI
Trigger: GATGCACACTTGGATTTTATGAATGCCCTGTACATATCTTTTCAAACTCTGTGTTTGTATGGAGGTGGATTTGATACAATGCTGACTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR GCA 72 bp CCCACGGCCTGTCCTCAGCCCCTGAAGGACACATGTTaGCCTCCATGGGCCAGGCCTTGGGCCTCTTCCTGC +
Preference number: 3 (lower is better)
Translates to: PTACPQPLKDTC*PPWARPWASSC
Trigger: GCAGGAAGAGGCCCAAGGCCTGGCCCATGGAGGGCAACATGTGTCCTTCAGGGGCTGAGGACAGGCCGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 72 bp GTCTCCCTCAGCCAGGGCTGGACGCAGCTGTGTGGGTaGTGTGTACACGCCAGGCACCTGTGCACCCCACTC +
Preference number: 3 (lower is better)
Translates to: VSLSQGWTQLCG*CVHARHLCTPL
Trigger: GAGTGGGGTGCACAGGTGCCTGGCGTGTACACACCACCCACACAGCTGCGTCCAGCCCTGGCTGAGGGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CAA 90 bp GTGCTGAAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACTGGGCACTTTGGCCTTaGGCTCTTCCCGGGGGCTTC +
Preference number: 3 (lower is better)
Translates to: VLKGWLPSLTPEAQSSRHWALWP*ALPGGF
Trigger: GAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCCA...GTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR GCA 72 bp CTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTaGTCAGTCAGCCTCCAACGGGCCTGTGAGGTAGGG +
Preference number: 3 (lower is better)
Translates to: LAPRQFKHFAGI*SVSLQRACEVG
Trigger: CCCTACCTCACAGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 72 bp TGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTaGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCC +
Preference number: 3 (lower is better)
Translates to: WGSSQRVGHFGL*LFPGASTHAWS
Trigger: GGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR CCA 72 bp GCCACAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTaGGGTAGGGACACAAGCCTTCTAACTGGAAGCACG +
Preference number: 3 (lower is better)
Translates to: ATGWSGPSWWPH*GRDTSLLTGST
Trigger: CGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTGGGCACTTTGGCCTTaGGCTCTTCCCGGGGGCTTC +
Preference number: 3 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICWALWP*ALPGGF
Trigger: GAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCCA...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 72 bp AGACTGGCACCTGGCAACAGCAGAGCAAACCCCATATaGGCCTTCAACCCCAGGCCACGGGCTTCTCCACAA +
Preference number: 3 (lower is better)
Translates to: RLAPGNSRANPI*AFNPRPRASPQ
Trigger: TTGTGGAGAAGCCCGTGGCCTGGGGTTGAAGGCCCATATGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAAGGTCATCCCAAAGAGTaGGGCACTTTGGCCTTTGGC +
Preference number: 3 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQGHPKE*GTLAFG
Trigger: GCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACC...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGGTCATCCCAAAGAGTaGGGCACTTTGGCCTTTGGC +
Preference number: 3 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQGHPKE*GTLAFG
Trigger: GCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACC...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGTGGAAAGACAGGATGTaGGAGGCTTGGGGGTCATCC +
Preference number: 3 (lower is better)
Translates to: SHSPQARPVDILATINSMWKDRM*EAWGSS
Trigger: GGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCA...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCTGGGCACTTTGGCCTTaGGCTCTTCCCGGGGGCTTC +
Preference number: 3 (lower is better)
Translates to: CPGVLRFLSAADTHRTEAWALWP*ALPGGF
Trigger: GAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCCA...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATAAAGAGTTGGGCACTTaGGCCTTTGGCTCTTCCCGG +
Preference number: 3 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYKELGT*AFGSSR
Trigger: CCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTT...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCCCTGAAGGACACATGTaGCCCTCCATGGGCCAGGCC +
Preference number: 3 (lower is better)
Translates to: CPGVLRFLSAADTHRTEAPEGHM*PSMGQA
Trigger: GGCCTGGCCCATGGAGGGCAACATGTGTCCTTCAGG...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 72 bp GACAGAAATCACAGAACTGTGGAGGGTAAGGGGTGCTaGAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCC +
Preference number: 3 (lower is better)
Translates to: DRNHRTVEGKGC*KAGFLPLPLRP
Trigger: GGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCACCCCTTACCCTCCACAGTTCTGTGATTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR GCA 72 bp CCTCCAGATGATGAACAAGGCGATGACAATCAGCAGTaGCACCCCCAGAAGGGGTACCACCACATACATGGC +
Preference number: 3 (lower is better)
Translates to: PPDDEQGDDNQQ*HPQKGYHHIHG
Trigger: GCCATGTATGTGGTGGTACCCCTTCTGGGGGTGGCACTGCTGATTGTCATCGCCTTGTTCATCATCTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370354.5
3UTR CCA 72 bp TCATCCTTCACACACCCTGTCCTCCTTCCAGGAGTGTaGGGACAGGTTTTAGGGGAGGCGGACATCACAGAT +
Preference number: 3 (lower is better)
Translates to: SSFTHPVLLPGV*GQVLGEADITD
Trigger: ATCTGTGATGTCCGCCTCCCCTAAAACCTGTCCCCACACTCCTGGAAGGAGGACAGGGTGTGTGAAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 72 bp ATGCCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTaGAGACCTGCAGAATGGAGCTGCTTTGTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: MPKGRVSGGCIG*RPAEWSCFVFF
Trigger: GAAGAAGACAAAGCAGCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 72 bp TCATGGGATGTCACTGGGTTGTCAAAAGATCAACTCTaGCTGGGGGTTGCGATGCTCCACCCACTGGGAGAG +
Preference number: 3 (lower is better)
Translates to: SWDVTGLSKDQL*LGVAMLHPLGE
Trigger: CTCTCCCAGTGGGTGGAGCATCGCAACCCCCAGCCAGAGTTGATCTTTTGACAACCCAGTGACATCCCATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CAA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATTGGGCACTTTGGCCTTaGGCTCTTCCCGGGGGCTTC +
Preference number: 3 (lower is better)
Translates to: RPVDILATINSMGLFLWHWALWP*ALPGGF
Trigger: GAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCCA...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACGGTCATCCCAAAGAGTaGGGCACTTTGGCCTTTGGC +
Preference number: 3 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHGHPKE*GTLAFG
Trigger: GCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACC...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp AGACTGGCACCTGGCAACAGCAGAGCAAACCCCATATGGGCCTTCAACCCCAGGGTTTTTGCTCAGTCCTaGTCCCTGTCCTCCAAATGT +
Preference number: 3 (lower is better)
Translates to: RLAPGNSRANPIWAFNPRVFAQS*SLSSKC
Trigger: ACATTTGGAGGACAGGGACAAGGACTGAGCAAAAAC...CCTGGGGTTGAAGGCCCATATGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 72 bp GGTCCACATGTCTGGAGAGACAAGCACACTAGAAACTaGATGGCAGAGTCCACGTGGGCCCCTTGGTCAATG +
Preference number: 3 (lower is better)
Translates to: GPHVWRDKHTRN*MAESTWAPWSM
Trigger: CATTGACCAAGGGGCCCACGTGGACTCTGCCATTCAGTTTCTAGTGTGCTTGTCTCTCCAGACATGTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR GCA 72 bp GGTTGGGTGTCCAATATAGTTAATGCCACGTTTCCTTaGTCAGGGCCCTGTCATCAGGCTACTCAGCCCTGC +
Preference number: 3 (lower is better)
Translates to: GWVSNIVNATFP*SGPCHQATQPC
Trigger: GCAGGGCTGAGTAGCCTGATGACAGGGCCCTGAGCAAGGAAACGTGGCATTAACTATATTGGACACCCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR GCA 72 bp CAGCTGTGTGGGTGGTGTGTACACGCCAGGCACCTGTaGACCCCACTCTTGCACTTGTGCTTTCATTTTGAA +
Preference number: 3 (lower is better)
Translates to: QLCGWCVHARHL*TPLLHLCFHFE
Trigger: TTCAAAATGAAAGCACAAGTGCAAGAGTGGGGTGCACAGGTGCCTGGCGTGTACACACCACCCACACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CCA 72 bp CAGAAACCATCCCAGAGACCGTGGTGCAACCCCACCTaGCAGAACACCATGAAGCATCTGAACCGAACATCA +
Preference number: 3 (lower is better)
Translates to: QKPSQRPWCNPT*QNTMKHLNRTS
Trigger: TGATGTTCGGTTCAGATGCTTCATGGTGTTCTGCCAGGTGGGGTTGCACCACGGTCTCTGGGATGGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp ATAGGAGGGGTGGTGACGGGTCGCTTTCTGCAGCTGGCACCTCCAGATGATGAACAGAGTAGACTGCATTaGGGTACCCTTTCCAGAACT +
Preference number: 3 (lower is better)
Translates to: IGGVVTGRFLQLAPPDDEQSRLH*GTLSRT
Trigger: AGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTG...TTCATCATCTGGAGGTGCCAGCTGCAGAAAGCGACCCGTCACCACCCCTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
3UTR-3UTR CAA 90 bp GTGCTGAAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACCAGTTAGGGAATTATTaGGCAACAAGGAGGCTAAGG +
Preference number: 3 (lower is better)
Translates to: VLKGWLPSLTPEAQSSRHQLGNY*ATRRLR
Trigger: CCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTG...GTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTCAGTTAGGGAATTATTaGGCAACAAGGAGGCTAAGG +
Preference number: 3 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGQLGNY*ATRRLR
Trigger: CCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTG...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCTGGAAAGACAGGATGTaGGAGGCTTGGGGGTCATCC +
Preference number: 3 (lower is better)
Translates to: CPGVLRFLSAADTHRTEAWKDRM*EAWGSS
Trigger: GGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCA...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 72 bp CTGGAAAGGGAGGACGAGAGGATGGAAAGGGTCAACTaGCGGGAGATTGACTCTCCAAGTGGAGACTCAACA +
Preference number: 3 (lower is better)
Translates to: LEREDERMERVN*REIDSPSGDST
Trigger: TGTTGAGTCTCCACTTGGAGAGTCAATCTCCCGTCAGTTGACCCTTTCCATCCTCTCGTCCTCCCTTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 72 bp GCTCTGCGAGGGGTCTCGGACAGAGTAGACTGCATTTaGGTACCCTTTCCAGAACTCCATTTTATCTGCTCC +
Preference number: 3 (lower is better)
Translates to: ALRGVSDRVDCI*VPFPELHFICS
Trigger: GGAGCAGATAAAATGGAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTGTCCGAGACCCCTCGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370354.5
3UTR-3UTR CAA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCCCGGGTGCTAGAGTTTaGTTCTATTGTGTTAATTAT +
Preference number: 3 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFPGARV*FYCVNY
Trigger: ATAATTAACACAATAGAACAAAACTCTAGCACCCGG...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTCAGTTAGGGAATTATTaGGCAACAAGGAGGCTAAGG +
Preference number: 3 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPQLGNY*ATRRLR
Trigger: CCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTG...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCCAGTTAGGGAATTATTaGGCAACAAGGAGGCTAAGG +
Preference number: 3 (lower is better)
Translates to: SEPNITGLKQPPVTLPTAQLGNY*ATRRLR
Trigger: CCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTG...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAAGAGTTGGGCACTTaGGCCTTTGGCTCTTCCCGG +
Preference number: 3 (lower is better)
Translates to: RPVDILATINSMGLFLWHKELGT*AFGSSR
Trigger: CCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTT...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATTGGAAAGACAGGATGTaGGAGGCTTGGGGGTCATCC +
Preference number: 3 (lower is better)
Translates to: RPVDILATINSMGLFLWHWKDRM*EAWGSS
Trigger: GGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCA...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCCAGAGGAGAAATGGTTaGGTGTTGAGGTCAGGAGGA +
Preference number: 3 (lower is better)
Translates to: CPGVLRFLSAADTHRTEAQRRNG*VLRSGG
Trigger: TCCTCCTGACCTCAACACCAAACCATTTCTCCTCTG...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp CCACTCTTGCACTTGTGCTTTCATTTTGAAAACCGGAGGCGATGGGAAGCGGGGGCAGGCCATGCATTCTaGCACCACACAAAAATTTGC +
Preference number: 3 (lower is better)
Translates to: PLLHLCFHFENRRRWEAGAGHAF*HHTKIC
Trigger: GCAAATTTTTGTGTGGTGCAAGAATGCATGGCCTGC...CCCCGCTTCCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAGTGCAAGAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR TCA 72 bp TCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTTTaGACACAGCTGGTCCACATGTCTGGAGAGACAAGC +
Preference number: 3 (lower is better)
Translates to: SQKVGSCQWVVV*TQLVHMSGETS
Trigger: GCTTGTCTCTCCAGACATGTGGACCAGCTGTGTTCAAACCACTACCCACTGGCATGAGCCTACTTTTTGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 72 bp GCACACACACATACTCCTAGAAAGACAGAGCCTCCGTaGGCGAGAGAGACTCTCTCCATGATCTCTCTCTTG +
Preference number: 3 (lower is better)
Translates to: AHTHTPRKTEPP*ARETLSMISLL
Trigger: CAAGAGAGAGATCATGGAGAGAGTCTCTCTCGCTCACGGAGGCTCTGTCTTTCTAGGAGTATGTGTGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR GCA 72 bp GTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTaGCAAGATATCCATCTCAGCCTCAACTGTGAGTGT +
Preference number: 3 (lower is better)
Translates to: VKLKSHLDQQLC*QDIHLSLNCEC
Trigger: ACACTCACAGTTGAGGCTGAGATGGATATCTTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR GCA 72 bp CTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTaGTGCCAAGATATCCATCTCAGCCTCAACTGTGAG +
Preference number: 3 (lower is better)
Translates to: LVKLKSHLDQQL*CQDIHLSLNCE
Trigger: CTCACAGTTGAGGCTGAGATGGATATCTTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CCA 72 bp GATAAGTTTCTTCTCACCTGCTCCCAGGTCACACTCTaGCACCTACTTGAAGAAATACTGGGAGAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: DKFLLTCSQVTL*HLLEEILGEPG
Trigger: CCCTGGCTCTCCCAGTATTTCTTCAAGTAGGTGCCAGAGTGTGACCTGGGAGCAGGTGAGAAGAAACTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 72 bp GCTCTGCTGCCAAGATATCCATCTCAGCCTCAACTGTaGGTGTCCACACATGAGACAGCACACACACATACT +
Preference number: 3 (lower is better)
Translates to: ALLPRYPSQPQL*VSTHETAHTHT
Trigger: AGTATGTGTGTGTGCTGTCTCATGTGTGGACACTCACAGTTGAGGCTGAGATGGATATCTTGGCAGCAGAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CCA 72 bp CCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATaGGGTTATTCCTTTGGCATAAGAGAAGCCAGTTCC +
Preference number: 3 (lower is better)
Translates to: PGLWTFWPQSTQ*GYSFGIREASS
Trigger: GGAACTGGCTTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
3UTR CCA 72 bp TTTGGAAGCACCCTAAGGAATTCACATTCATGGCAGTaGGATTGGAAGTTGAAAAAGAGGCCTCCCGGGGCT +
Preference number: 3 (lower is better)
Translates to: FGSTLRNSHSWQ*DWKLKKRPPGA
Trigger: AGCCCCGGGAGGCCTCTTTTTCAACTTCCAATCCCACTGCCATGAATGTGAATTCCTTAGGGTGCTTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CAA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACCAGGATGTTGGAGGCTaGGGGGTCATCCCAAAGAGT +
Preference number: 3 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHQDVGG*GVIPKS
Trigger: ACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp CCACTCTTGCACTTGTGCTTTCATTTTGAAAACCGGAGGCGATGGGAAGCGGGGACGAAAGAGTCAGCATaGTATCAAATCCACCTCCAT +
Preference number: 3 (lower is better)
Translates to: PLLHLCFHFENRRRWEAGTKESA*YQIHLH
Trigger: ATGGAGGTGGATTTGATACAATGCTGACTCTTTCGT...CCCCGCTTCCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAGTGCAAGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR TCA 72 bp CTCTGTGGCCTGAAGGCAGGGCTGCATTCAAGGAAATaGGTCCCAATGTCTGCCTTAGAGAGATATTTTGAC +
Preference number: 3 (lower is better)
Translates to: LCGLKAGLHSRK*VPMSALERYFD
Trigger: GTCAAAATATCTCTCTAAGGCAGACATTGGGACTCATTTCCTTGAATGCAGCCCTGCCTTCAGGCCACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 72 bp CACCCTGTACATACGAGAAGTGCTGAACTGCAAAGCTaGAGGCACGGTGAAGGGATCCTTAATATCTTGAGC +
Preference number: 3 (lower is better)
Translates to: HPVHTRSAELQS*RHGEGILNILS
Trigger: GCTCAAGATATTAAGGATCCCTTCACCGTGCCTTCAGCTTTGCAGTTCAGCACTTCTCGTATGTACAGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CCA 72 bp GGAGGTGACATTCCTCTTTTCAGACCGGATCCCTCCTaGTACAAATATAGCTGCACACCGGCTATTGTTTCA +
Preference number: 3 (lower is better)
Translates to: GGDIPLFRPDPS*YKYSCTPAIVS
Trigger: TGAAACAATAGCCGGTGTGCAGCTATATTTGTACCAGGAGGGATCCGGTCTGAAAAGAGGAATGTCACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp AAGGAGGCAAACAGTGACAACTTTGGGGGTTGGGTGTCCAATATAGTTAATGCCTGTGATAAATTTCCCTaGGCCTCCTATGAACGGCCC +
Preference number: 3 (lower is better)
Translates to: KEANSDNFGGWVSNIVNACDKFP*ASYERP
Trigger: GGGCCGTTCATAGGAGGCCAAGGGAAATTTATCACA...GGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp TCCAAAGCCTCACTGAAAACAGACTGGCACCTGGCAACAGCAGAGCAAACCCCACCGGGTGCTAGAGTTTaGTTCTATTGTGTTAATTAT +
Preference number: 3 (lower is better)
Translates to: SKASLKTDWHLATAEQTPPGARV*FYCVNY
Trigger: ATAATTAACACAATAGAACAAAACTCTAGCACCCGG...TGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 72 bp TTTTTCAAGGAGGCAAACAGTGACAACTTTGGGGGTTaGGTGTCCAATATAGTTAATGCCACGTTTCCTTGC +
Preference number: 3 (lower is better)
Translates to: FFKEANSDNFGG*VSNIVNATFPC
Trigger: GCAAGGAAACGTGGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CCA 72 bp ACAATGTCAGAGCAAAATAACAGATGTGTTCAGGCCTaGGAAATTGGTATCGATGAGGGGAGATGGATTGAG +
Preference number: 3 (lower is better)
Translates to: TMSEQNNRCVQA*EIGIDEGRWIE
Trigger: CTCAATCCATCTCCCCTCATCGATACCAATTTCCCAGGCCTGAACACATCTGTTATTTTGCTCTGACATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR-3UTR CAA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGAAAGAGTTGGGCACTTaGGCCTTTGGCTCTTCCCGG +
Preference number: 3 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLKELGT*AFGSSR
Trigger: CCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTT...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR-3UTR CAA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGCAGGATGTTGGAGGCTaGGGGGTCATCCCAAAGAGT +
Preference number: 3 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLQDVGG*GVIPKS
Trigger: ACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 72 bp TATAGCTGCACACCGGCTATTGTTTCAGATAAGCAATaGGAAAAGGCAACGTGCACACATAGATACACACAC +
Preference number: 3 (lower is better)
Translates to: YSCTPAIVSDKQ*EKATCTHRYTH
Trigger: GTGTGTGTATCTATGTGTGCACGTTGCCTTTTCTCATTGCTTATCTGAAACAATAGCCGGTGTGCAGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 72 bp TTGAATATTTGGAGGCGAATGATGGAGCGGCCAGTCTaGCAGCGAAGCATCTGCTTTACAGAATATTTAGAA +
Preference number: 3 (lower is better)
Translates to: LNIWRRMMERPV*QRSICFTEYLE
Trigger: TTCTAAATATTCTGTAAAGCAGATGCTTCGCTGTCAGACTGGCCGCTCCATCATTCGCCTCCAAATATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CCA 72 bp ACTGTTGAGGCATTGAGCTTGAGAGGGTGTGCTATTTaGGTATGTTTGTCAGATAAATTCTTGCTAGAGAGA +
Preference number: 3 (lower is better)
Translates to: TVEALSLRGCAI*VCLSDKFLLER
Trigger: TCTCTCTAGCAAGAATTTATCTGACAAACATACCCAAATAGCACACCCTCTCAAGCTCAATGCCTCAACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR TCA 72 bp GAGATGCGCACCATCGTTAAGGAGAAATCCTCAATCTaGAGTTCAATTTCAATGCACCATTCGCAAAAAGTA +
Preference number: 3 (lower is better)
Translates to: EMRTIVKEKSSI*SSISMHHSQKV
Trigger: TACTTTTTGCGAATGGTGCATTGAAATTGAACTTCAGATTGAGGATTTCTCCTTAACGATGGTGCGCATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR TCA 72 bp GCCAGAATCACAGCTACTGTGAATTGTCTTAAGTTGTaGTTTTCTCGAAGTTCTGAAGTAGTGGGCTTCAAA +
Preference number: 3 (lower is better)
Translates to: ARITATVNCLKL*FSRSSEVVGFK
Trigger: TTTGAAGCCCACTACTTCAGAACTTCGAGAAAATCACAACTTAAGACAATTCACAGTAGCTGTGATTCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR TCA 72 bp AACTATGTTATTCACAGGATAAATAACGGAGTAGAGTaGAAGGCTGCAATATCCAACATCCCTGTGATGGAG +
Preference number: 3 (lower is better)
Translates to: NYVIHRINNGVE*KAAISNIPVME
Trigger: CTCCATCACAGGGATGTTGGATATTGCAGCCTTTCACTCTACTCCGTTATTTATCCTGTGAATAACATAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR TCA 72 bp AATGTACAGATTTCCCAGCTGACAAGGGTCAACACATaGATACAAGCACAGTTTAAAGTGGTATCAAAATTA +
Preference number: 3 (lower is better)
Translates to: NVQISQLTRVNT*IQAQFKVVSKL
Trigger: TAATTTTGATACCACTTTAAACTGTGCTTGTATTCATGTGTTGACCCTTGTCAGCTGGGAAATCTGTACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCTACCCCGGTACACCATaGCCCGGGGGAGGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLYPGTP*PGGGCA
Trigger: GGCACACCCTCCCCCGGGTCATGGTGTACCGGGGTA...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GTTCTGAGCATAGGAGGGGTGGTGACGGGTCGCTTTCTGCAGCTGGCACCTCCAGGCGGCCGCCCTGTTTaGGCACGCAGCCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: VLSIGGVVTGRFLQLAPPGGRPV*ARSPPP
Trigger: AGGTGGCGGGCTGCGTGCGCAAACAGGGCGGCCGCC...TGGAGGTGCCAGCTGCAGAAAGCGACCCGTCACCACCCCTCCTATGCTCAGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR GCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGGGCGGCCGCCCTGTTTaGGCACGCAGCCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRGGRPV*ARSPPP
Trigger: AGGTGGCGGGCTGCGTGCGCAAACAGGGCGGCCGCC...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCCCATCCCAGAGACCGTaGTGCAACCCCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLPSQRP*CNPTWQ
Trigger: CTGCCAGGTGGGGTTGCACCACGGTCTCTGGGATGG...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGTACCCCGGTACACCATaGCCCGGGGGAGGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRYPGTP*PGGGCA
Trigger: GGCACACCCTCCCCCGGGTCATGGTGTACCGGGGTA...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGGAGGCCTCCCGGGGCTaGCTGCTCAGCACTGCGTCT +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGREASRG*LLSTAS
Trigger: AGACGCAGTGCTGAGCAGTCAGCCCCGGGAGGCCTC...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCAGGGAGGTAGAGGGTaGTCTCTAGCCGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTQGGRG*SLAGLW
Trigger: CCACAGTCCGGCTAGAGAGCACCCTCTACCTCCCTG...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGAGCCCGCCACCTCGCTaGTGCGCCTCTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRSPPPR*CASSSR
Trigger: CCTGCTGGAAGAGGCGCAGCAGCGAGGTGGCGGGCT...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCACATGTTGCCCTCCATaGGCCAGGCCTTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTTCCPP*ARPWAS
Trigger: AGAGGCCCAAGGCCTGGCCCATGGAGGGCAACATGT...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTACCCCGGTACACCATaGCCCGGGGGAGGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGYPGTP*PGGGCA
Trigger: GGCACACCCTCCCCCGGGTCATGGTGTACCGGGGTA...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTGAAGGACACATGTTaGCCTCCATGGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTLKDTC*PPWARP
Trigger: AGGCCTGGCCCATGGAGGGCAACATGTGTCCTTCAG...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGGGCTGGGGGTTGCGATaGTCCACCCACTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRGWGLR*STHWER
Trigger: CCTCTCCCAGTGGGTGGAGCATCGCAACCCCCAGCC...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCGGCTGGGGGTTGCGATaGTCCACCCACTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSGWGLR*STHWER
Trigger: CCTCTCCCAGTGGGTGGAGCATCGCAACCCCCAGCC...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCAGGGTCTCACTTCTCTaGCATTCAGGCCCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFRVSLL*HSGPPG
Trigger: GCCCGGCGGGCCTGAATGGCAGAGAAGTGAGACCCT...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674441.1
CDS-3UTR CCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGGCCCCAGCACCACCTaGGGGCTGTTCGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQGPSTT*GLFAAS
Trigger: AGAGGCAGCGAACAGCCCCCAGGTGGTGCTGGGGCC...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCGGGGTGCTGAAAGGCTaGCTTCCTTCCCTTACCCCT +
Preference number: 4 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTGVLKG*LPSLTP
Trigger: AGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCACCCC...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTGGCCCGCCGGGCTCCTaGGGCCAACGAAAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPGPPGS*GQRKER
Trigger: CCTCTCTTTTCGTTGGCCCCAGGAGCCCGGCGGGCC...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674441.1
CDS-3UTR TCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCGTGCATCGCAAGGAGTaGTGCCTGCTGTGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLVHRKE*CLLCAV
Trigger: TACAGCACACAGCAGGCATCACTCCTTGCGATGCAC...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGACTCTCGCTCGATGGTaGCCTGGCGCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRTLARW*PGAAPP
Trigger: TGGAGGAGCTGCGCCAGGGCACCATCGAGCGAGAGT...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCGATGACAATCAGCAGTaGCACCCCCAGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTDDNQQ*HPQKGY
Trigger: GTACCCCTTCTGGGGGTGGCACTGCTGATTGTCATC...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGACTGGCACCTGGCAACAGCAGAGCAAACCCCATATGGGCCTTCAACCCCAGGCTGGGGGCTGTTCGCTaGCTCTCGGTGCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RLAPGNSRANPIWAFNPRLGAVR*LSVPRR
Trigger: CCTTCTGGGCACCGAGAGGCAGCGAACAGCCCCCAG...CCTGGGGTTGAAGGCCCATATGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGCTGGGGGCTGTTCGCTaGCTCTCGGTGCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SHSPQARPVDILATINSMLGAVR*LSVPRR
Trigger: CCTTCTGGGCACCGAGAGGCAGCGAACAGCCCCCAG...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGCTGGGGGCTGTTCGCTaGCTCTCGGTGCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: APRQFKHFAGICSVSLQRLGAVR*LSVPRR
Trigger: CCTTCTGGGCACCGAGAGGCAGCGAACAGCCCCCAG...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTCTGGGGGCTGTTCGCTaGCTCTCGGTGCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVLGAVR*LSVPRR
Trigger: CCTTCTGGGCACCGAGAGGCAGCGAACAGCCCCCAG...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGGGGGCTTCGACTCATaGGTGGTCCCTACCCCCACC +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQGGFDS*VVPTPT
Trigger: GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCC...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCCAGTTAAAGGGCAGGTaGCTTCTGCCCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLQLKGR*LLPHCC
Trigger: ACAGCAGTGGGGCAGAAGGCACCTGCCCTTTAACTG...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTCCGCCACCTCGCTGCTaGGCCTCTTCCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPPPPRC*ASSSRG
Trigger: GCCCCTGCTGGAAGAGGCGCAGCAGCGAGGTGGCGG...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCCACTGTAAGACACGCTaGCCTCCTCACTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLHCKTR*PPHCCS
Trigger: AGAGCAGCAGTGAGGAGGCCAGCGTGTCTTACAGTG...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGGGGCACTTTGGCCTTTaGCTCTTCCCGGGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGGHFGL*LFPGAS
Trigger: CGAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCC...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGGGGCACTTTGGCCTTTaGCTCTTCCCGGGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRGHFGL*LFPGAS
Trigger: CGAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCC...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCCCATCCCAGAGACCGTaGTGCAACCCCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGPSQRP*CNPTWQ
Trigger: CTGCCAGGTGGGGTTGCACCACGGTCTCTGGGATGG...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCCACAGAACAGAAGCCTaGGCCAGGGGCACCATGCCA +
Preference number: 4 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFHRTEA*ARGTMP
Trigger: TGGCATGGTGCCCCTGGCCCAGGCTTCTGTTCTGTG...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGGAAAACCGGAGGCGATaGGAAGCGGGGGAGGGACAG +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRENRRR*EAGEGQ
Trigger: CTGTCCCTCCCCCGCTTCCCATCGCCTCCGGTTTTC...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGTCCCTTGGCCTCCTATaGACGGCCCGGGTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: SHSPQARPVDILATINSMSLGLL*TARVLE
Trigger: CTCTAGCACCCGGGCCGTTCATAGGAGGCCAAGGGA...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTTCCCTTGGCCTCCTATaGACGGCCCGGGTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPSLGLL*TARVLE
Trigger: CTCTAGCACCCGGGCCGTTCATAGGAGGCCAAGGGA...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCTGTCCAAAGCCTCACTaGAAACAGACTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTCPKPH*KQTGTW
Trigger: CCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGACA...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTCCTCCAACGGGCCTGTaGGGTAGGGGGAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVPPTGL*GRGKDG
Trigger: TCCATCCTTCCCCCTACCTCACAGGCCCGTTGGAGG...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCCAACTGACGGGAGATTaGCTCTCCAAGTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLQLTGD*LSKWRL
Trigger: GAGTCTCCACTTGGAGAGTCAATCTCCCGTCAGTTG...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCAACTCCCTTTGGCTCTaGTCAGTGGAGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLNSLWL*SVELMP
Trigger: AGGCATGAGCTCCACTGATCAGAGCCAAAGGGAGTT...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCCAAGGAGGCAAACAGTaGCAACTTTGGGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLQGGKQ*QLWGLG
Trigger: ACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTTG...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTGAGGCCTCCCGGGGCTaGCTGCTCAGCACTGCGTCT +
Preference number: 4 (lower is better)
Translates to: DRMLEAWGSSQRVGHFGLEASRG*LLSTAS
Trigger: AGACGCAGTGCTGAGCAGTCAGCCCCGGGAGGCCTC...AAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp AGACTGGCACCTGGCAACAGCAGAGCAAACCCCATATGGGCCTTCAACCCCAGGGTGCGTCGTCCTCCATaGAGCCACCCATGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: RLAPGNSRANPIWAFNPRVRRPP*SHPWLP
Trigger: CGGAAGCCATGGGTGGCTGCATGGAGGACGACGCAC...CCTGGGGTTGAAGGCCCATATGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS-3UTR GCA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTACTCTCGCTCGATGGTaGCCTGGCGCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGTLARW*PGAAPP
Trigger: TGGAGGAGCTGCGCCAGGGCACCATCGAGCGAGAGT...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTACTCTCGCTCGATGGTaGCCTGGCGCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVTLARW*PGAAPP
Trigger: TGGAGGAGCTGCGCCAGGGCACCATCGAGCGAGAGT...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCGACCAGCAGCTCTGCTaGCAAGATATCCATCTCAGC +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLDQQLC*QDIHLS
Trigger: GCTGAGATGGATATCTTGGCAGCAGAGCTGCTGGTC...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCCCGCCACCTCGCTGCTaGGCCTCTTCCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: QVETQHQRHMRASAKTAPPPPRC*ASSSRG
Trigger: GCCCCTGCTGGAAGAGGCGCAGCAGCGAGGTGGCGG...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCGTCGCTTTCTGCAGCTaGCACCTCCAGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTVAFCS*HLQMMN
Trigger: GTTCATCATCTGGAGGTGCCAGCTGCAGAAAGCGAC...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTTGTGCCCGGCGCGACTaGCTAGGTACCGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPCARRD*LGTGSE
Trigger: CTCAGAACCGGTACCTAGCCAGTCGCGCCGGGCACA...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGTGTGCCCGGCGCGACTaGCTAGGTACCGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SHSPQARPVDILATINSMCARRD*LGTGSE
Trigger: CTCAGAACCGGTACCTAGCCAGTCGCGCCGGGCACA...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGGCCCCAGCACCACCTaGGGGCTGTTCGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLGPSTT*GLFAAS
Trigger: AGAGGCAGCGAACAGCCCCCAGGTGGTGCTGGGGCC...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCTCACTGCTGCTCTCTTaGGGCGCAGTCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGSLLLS*GAVTSS
Trigger: CGAGGAGGTGACTGCGCCCCAAGAGAGCAGCAGTGA...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTGCTTCGACTCATGCGTaGTCCCTACCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVASTHA*SLPPPS
Trigger: GGAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGC...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGCTTCGACTCATGCGTaGTCCCTACCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: SHSPQARPVDILATINSMASTHA*SLPPPS
Trigger: GGAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGC...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCAGTGGTCCAAGCTGGTaGCCTCACTGGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGSGPSW*PHWGRD
Trigger: GTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACT...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCTGGAGTGGTCCAAGCTaGTGGCCTCACTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGWSGPS*WPHWGR
Trigger: CCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCA...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGACCCCAGCCACAGGGTaGAGTGGTCCAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: APRQFKHFAGICSVSLQRTPATG*SGPSWW
Trigger: CCACCAGCTTGGACCACTCCACCCTGTGGCTGGGGT...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCGGGAGGACGAGAGGATaGAAAGGGTCAACTGACGGG +
Preference number: 4 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFGRTRG*KGSTDG
Trigger: CCCGTCAGTTGACCCTTTCCATCCTCTCGTCCTCCC...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GTTCTGAGCATAGGAGGGGTGGTGACGGGTCGCTTTCTGCAGCTGGCACCTCCACACATACATGGCATCTaGGCTCTGCGAGGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: VLSIGGVVTGRFLQLAPPHIHGI*ALRGVS
Trigger: CGAGACCCCTCGCAGAGCTCAGATGCCATGTATGTG...TGGAGGTGCCAGCTGCAGAAAGCGACCCGTCACCACCCCTCCTATGCTCAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR TCA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGCACATACATGGCATCTaGGCTCTGCGAGGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGHIHGI*ALRGVS
Trigger: CGAGACCCCTCGCAGAGCTCAGATGCCATGTATGTG...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGAGGGTAAGGGGTGCTaGAAGGCTGGCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: APRQFKHFAGICSVSLQREGKGC*KAGFLP
Trigger: GGGAAGGAAGCCAGCCTTTCAGCACCCCTTACCCTC...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGCCCTGCGAGGGGAGGTaGCATTCCTCTTTTCAGACC +
Preference number: 4 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGPCEGR*HSSFQT
Trigger: GGTCTGAAAAGAGGAATGTCACCTCCCCTCGCAGGG...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TCAGCAGTGCCACCCCCAGAAGGGGTACCACCACATACATGGCATCTGAGCTCTACTCTCGCTCGATGGTaGCCTGGCGCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SAVPPPEGVPPHTWHLSSTLARW*PGAAPP
Trigger: TGGAGGAGCTGCGCCAGGGCACCATCGAGCGAGAGT...AGAGCTCAGATGCCATGTATGTGGTGGTACCCCTTCTGGGGGTGGCACTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR GCA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGATGGCATCTGAGCTCTaGGAGGGGTCTCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGMASEL*EGSRTE
Trigger: CTCTGTCCGAGACCCCTCGCAGAGCTCAGATGCCAT...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGACTGGCACCTGGCAACAGCAGAGCAAACCCCATATGGGCCTTCAACCCCAGGCAGGGAGGTAGAGGGTaGTCTCTAGCCGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: RLAPGNSRANPIWAFNPRQGGRG*SLAGLW
Trigger: CCACAGTCCGGCTAGAGAGCACCCTCTACCTCCCTG...CCTGGGGTTGAAGGCCCATATGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTCAGGGAGGTAGAGGGTaGTCTCTAGCCGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVQGGRG*SLAGLW
Trigger: CCACAGTCCGGCTAGAGAGCACCCTCTACCTCCCTG...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGTGGCCTCCTCACTGCTaGTCTCTTGGGGCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQWPPHC*SLGAQS
Trigger: TGACTGCGCCCCAAGAGAGCAGCAGTGAGGAGGCCA...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTTGGCCTCCTCACTGCTaGTCTCTTGGGGCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPWPPHC*SLGAQS
Trigger: TGACTGCGCCCCAAGAGAGCAGCAGTGAGGAGGCCA...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTCGCTGGCCTCCTCACTaGTGCTCTCTTGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPRWPPH*CSLGAQ
Trigger: CTGCGCCCCAAGAGAGCAGCAGTGAGGAGGCCAGCG...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTCGCTGGCCTCCTCACTaGTGCTCTCTTGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: DRMLEAWGSSQRVGHFGLRWPPH*CSLGAQ
Trigger: CTGCGCCCCAAGAGAGCAGCAGTGAGGAGGCCAGCG...AAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGCGCTGGCCTCCTCACTaGTGCTCTCTTGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLRWPPH*CSLGAQ
Trigger: CTGCGCCCCAAGAGAGCAGCAGTGAGGAGGCCAGCG...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGGGGGCTTCGACTCATaGGTGGTCCCTACCCCCACC +
Preference number: 4 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLGGFDS*VVPTPT
Trigger: GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCC...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCGATGAAGGGCAGGAGTaGAATGCTGAAGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSDEGQE*NAEGPG
Trigger: CCCTGGGCCTTCAGCATTGCACTCCTGCCCTTCATC...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCAAGTTTCTTCTCACCTaGTCCCAGGTCACACTCTGG +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLKFLLT*SQVTLW
Trigger: CCAGAGTGTGACCTGGGAGCAGGTGAGAAGAAACTT...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCCCTTGGGCCTCTTCCTaGTCTCTCCCATTACCACCC +
Preference number: 4 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSPWASS*SLPLPP
Trigger: GGGTGGTAATGGGAGAGAGCAGGAAGAGGCCCAAGG...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGCGTGTGAGCGGGGGTTaGATAGGGTGGAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: APRQFKHFAGICSVSLQRRVSGG*IGWRPA
Trigger: TGCAGGTCTCCACCCTATGCAACCCCCGCTCACACG...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGCACGCCAGGCACCTGTaGACCCCACTCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: SHSPQARPVDILATINSMHARHL*TPLLHL
Trigger: CAAGTGCAAGAGTGGGGTGCACAGGTGCCTGGCGTG...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp GACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTCCTCCCGGGGCTGACTaGTCAGCACTGCGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: DRMLEAWGSSQRVGHFGLPPGAD*SALRLP
Trigger: AGGGAGACGCAGTGCTGAGCAGTCAGCCCCGGGAGG...AAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCCTCCAGGAACTCATTaGCACGAGGGAATCGTTTCA +
Preference number: 4 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTPPGTH*HEGIVS
Trigger: TGAAACGATTCCCTCGTGCCAATGAGTTCCTGGAGG...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCCCTCCAGGAACTCATTaGCACGAGGGAATCGTTTCA +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLPPGTH*HEGIVS
Trigger: TGAAACGATTCCCTCGTGCCAATGAGTTCCTGGAGG...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTCCAGAAGGCTCCCCTTaGCTATGCACAGTACCCCGG +
Preference number: 4 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGPEGSP*LCTVPR
Trigger: CCGGGGTACTGTGCATAGCCAAGGGGAGCCTTCTGG...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGCCAGAAGGCTCCCCTTaGCTATGCACAGTACCCCGG +
Preference number: 4 (lower is better)
Translates to: APRQFKHFAGICSVSLQRPEGSP*LCTVPR
Trigger: CCGGGGTACTGTGCATAGCCAAGGGGAGCCTTCTGG...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGTCACTGCTGCTCTCTTaGGGCGCAGTCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQSLLLS*GAVTSS
Trigger: CGAGGAGGTGACTGCGCCCCAAGAGAGCAGCAGTGA...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTTCACTGCTGCTCTCTTaGGGCGCAGTCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPSLLLS*GAVTSS
Trigger: CGAGGAGGTGACTGCGCCCCAAGAGAGCAGCAGTGA...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCCACTGTAAGACACGCTaGCCTCCTCACTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFHCKTR*PPHCCS
Trigger: AGAGCAGCAGTGAGGAGGCCAGCGTGTCTTACAGTG...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCTGTCAGCGCCAGGGTTaGCGGCCACTATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GGLGVIPKSWALWPLALPCQRQG*RPLSPR
Trigger: ACGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACA...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGTGTCAGCGCCAGGGTTaGCGGCCACTATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQCQRQG*RPLSPR
Trigger: ACGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACA...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATGGGCACTTTGGCCTTTaGCTCTTCCCGGGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYGHFGL*LFPGAS
Trigger: CGAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCC...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGCCCAGGCCAGGCCTGTaGACATTCTGGCCACAATCA +
Preference number: 4 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGPRPGL*TFWPQS
Trigger: TGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGG...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCCCCAGGCCAGGCCTGTaGACATTCTGGCCACAATCA +
Preference number: 4 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGPRPGL*TFWPQS
Trigger: TGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGG...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCACCCCAGCCACAGGGTaGAGTGGTCCAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICTPATG*SGPSWW
Trigger: CCACCAGCTTGGACCACTCCACCCTGTGGCTGGGGT...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCATTCACCAGCATCTCTaGCATCAGGGAGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLIHQHL*HQGALE
Trigger: TTCCAGAGCTCCCTGATGCCAGAGATGCTGGTGAAT...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCCCATCCCAGAGACCGTaGTGCAACCCCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICPSQRP*CNPTWQ
Trigger: CTGCCAGGTGGGGTTGCACCACGGTCTCTGGGATGG...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCGGGGGTTGCATAGGGTaGAGACCTGCAGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGGGCIG*RPAEWS
Trigger: GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCC...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTCACAGAACAGAAGCCTaGGCCAGGGGCACCATGCCA +
Preference number: 4 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGHRTEA*ARGTMP
Trigger: TGGCATGGTGCCCCTGGCCCAGGCTTCTGTTCTGTG...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTCTGGACGCAGCTGTGTaGGTGGTGTGTACACGCCAG +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVLDAAV*VVCTRQ
Trigger: CTGGCGTGTACACACCACCCACACAGCTGCGTCCAG...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CAA 72 bp TGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTaGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATG +
Preference number: 4 (lower is better)
Translates to: WRLGGHPKELGT*AFGSSRGLRLM
Trigger: CATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTCACATACATGGCATCTaGGCTCTGCGAGGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGHIHGI*ALRGVS
Trigger: CGAGACCCCTCGCAGAGCTCAGATGCCATGTATGTG...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAACACATACATGGCATCTaGGCTCTGCGAGGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQHIHGI*ALRGVS
Trigger: CGAGACCCCTCGCAGAGCTCAGATGCCATGTATGTG...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGTACCCCGGTACACCATaGCCCGGGGGAGGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELYPGTP*PGGGCA
Trigger: GGCACACCCTCCCCCGGGTCATGGTGTACCGGGGTA...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAACCCTGCGAGGGGAGGTaGCATTCCTCTTTTCAGACC +
Preference number: 4 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQPCEGR*HSSFQT
Trigger: GGTCTGAAAAGAGGAATGTCACCTCCCCTCGCAGGG...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTCGCTGCCTCTCGGTaGCCAGAAGGCTCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPFAASR*PEGSPW
Trigger: CCAAGGGGAGCCTTCTGGGCACCGAGAGGCAGCGAA...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGTTCGCTGCCTCTCGGTaGCCAGAAGGCTCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLFAASR*PEGSPW
Trigger: CCAAGGGGAGCCTTCTGGGCACCGAGAGGCAGCGAA...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGCACTTCGCAGGCATTTaGTCAGTCAGCCTCCAACGG +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRHFAGI*SVSLQR
Trigger: CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTG...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCCAGCTGCAACTCAGATaGCAAAGGCAGCGGGCATTT +
Preference number: 4 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFQLQLR*QRQRAF
Trigger: AAATGCCCGCTGCCTTTGGCATCTGAGTTGCAGCTG...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCCCATTACCACCCAGCTaGAACTCAGATGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFPLPPS*NSDAKG
Trigger: GCCTTTGGCATCTGAGTTGCAGCTGGGTGGTAATGG...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTCCTTGGGCCTCTTCCTaGTCTCTCCCATTACCACCC +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVPWASS*SLPLPP
Trigger: GGGTGGTAATGGGAGAGAGCAGGAAGAGGCCCAAGG...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCCCTTGGGCCTCTTCCTaGTCTCTCCCATTACCACCC +
Preference number: 4 (lower is better)
Translates to: GGLGVIPKSWALWPLALPPWASS*SLPLPP
Trigger: GGGTGGTAATGGGAGAGAGCAGGAAGAGGCCCAAGG...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GTGCTGAAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACCTGAAGGACACATGTTaGCCTCCATGGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VLKGWLPSLTPEAQSSRHLKDTC*PPWARP
Trigger: AGGCCTGGCCCATGGAGGGCAACATGTGTCCTTCAG...GTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATCGTGTGAGCGGGGGTTaGATAGGGTGGAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYRVSGG*IGWRPA
Trigger: TGCAGGTCTCCACCCTATGCAACCCCCGCTCACACG...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCGGTTCTGAGCATAGGAGGGGTGGTGACGGGTCGCTTTCTGCAGCTGGCACCTGTCGCTTTCTGCAGCTaGCACCTCCAGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: PVLSIGGVVTGRFLQLAPVAFCS*HLQMMN
Trigger: GTTCATCATCTGGAGGTGCCAGCTGCAGAAAGCGAC...AGGTGCCAGCTGCAGAAAGCGACCCGTCACCACCCCTCCTATGCTCAGAACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CCA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCTGGTGCTGGACAGTCTaGAGAGAGAGAGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSWCWTV*RERAQG
Trigger: TCCCTGAGCTCTCTCTCTCCAGACTGTCCAGCACCA...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGTGGTGCTGGACAGTCTaGAGAGAGAGAGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRWCWTV*RERAQG
Trigger: TCCCTGAGCTCTCTCTCTCCAGACTGTCCAGCACCA...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCTATCTCCTCGTACTTTaGGGGTGGGTCACTGTAAGA +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLYLLVL*GWVTVR
Trigger: TCTTACAGTGACCCACCCCCAAAGTACGAGGAGATA...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCTATCTCCTCGTACTTTaGGGGTGGGTCACTGTAAGA +
Preference number: 4 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTYLLVL*GWVTVR
Trigger: TCTTACAGTGACCCACCCCCAAAGTACGAGGAGATA...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTTCGACTCATGCGTaGTCCCTACCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLASTHA*SLPPPS
Trigger: GGAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGC...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCCCCAGGCCAGGCCTGTaGACATTCTGGCCACAATCA +
Preference number: 4 (lower is better)
Translates to: GGLGVIPKSWALWPLALPPRPGL*TFWPQS
Trigger: TGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGG...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCGAAATCACAGAACTGTaGAGGGTAAGGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLEITEL*RVRGAE
Trigger: TTCAGCACCCCTTACCCTCCACAGTTCTGTGATTTC...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGCTCCTTCCAGGAGTGTaGGGACAGGTTTTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRLLPGV*GQVLGE
Trigger: CTCCCCTAAAACCTGTCCCCACACTCCTGGAAGGAG...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTGCTGAAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACTCCAGAAGTCCTCTGTaGCCTGAAGGCAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VLKGWLPSLTPEAQSSRHSRSPL*PEGRAA
Trigger: TGCAGCCCTGCCTTCAGGCCACAGAGGACTTCTGGA...GTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTGGCATCAGGGAGCTCTaGAAAGGGAGGACGAGAGGA +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVGIREL*KGRTRG
Trigger: TCCTCTCGTCCTCCCTTTCCAGAGCTCCCTGATGCC...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCAGACCGGATCCCTCCTaGTACAAATATAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTRPDPS*YKYSCT
Trigger: TGTGCAGCTATATTTGTACCAGGAGGGATCCGGTCT...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTGAGGGTAAGGGGTGCTaGAAGGCTGGCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPEGKGC*KAGFLP
Trigger: GGGAAGGAAGCCAGCCTTTCAGCACCCCTTACCCTC...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGCAGTGGGTAGTGGTTTaGACACAGCTGGTCCACATG +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRQWVVV*TQLVHM
Trigger: CATGTGGACCAGCTGTGTTCAAACCACTACCCACTG...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TCCAAAGCCTCACTGAAAACAGACTGGCACCTGGCAACAGCAGAGCAAACCCCACCTCCAACGGGCCTGTaGGGTAGGGGGAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: SKASLKTDWHLATAEQTPPPTGL*GRGKDG
Trigger: TCCATCCTTCCCCCTACCTCACAGGCCCGTTGGAGG...TGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGAACTCCCTTTGGCTCTaGTCAGTGGAGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRNSLWL*SVELMP
Trigger: AGGCATGAGCTCCACTGATCAGAGCCAAAGGGAGTT...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTTTAAGCAACCTCCTGTaGCTCTTCCCACGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPLSNLL*LFPRPV
Trigger: GACAGGCCGTGGGAAGAGTCACAGGAGGTTGCTTAA...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTGCTGAACTGCAAAGCTaGAGGCACGGTGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVAELQS*RHGEGI
Trigger: GATCCCTTCACCGTGCCTTCAGCTTTGCAGTTCAGC...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAAATGGAGCGGCCAGTCTaGCAGCGAAGCATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQMERPV*QRSICF
Trigger: AAAGCAGATGCTTCGCTGTCAGACTGGCCGCTCCAT...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGATCCTTGGCCTGCCATaGTGCTCCCTCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLILGLP*CSLSCR
Trigger: CCTGCAGCTGAGGGAGCATCATGGCAGGCCAAGGAT...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674441.1
CDS-3UTR GCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTACCCATGGCTTCCGCTaGTTCTCATTCTGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPTHGFR*FSFCPK
Trigger: CTTGGGGCAGAATGAGAAGCAGCGGAAGCCATGGGT...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS-3UTR GCA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCACTTCTCTTGTGGGGTaGGTCGTCCTCCATGCAGCC +
Preference number: 4 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICTSLVG*VVLHAA
Trigger: GGCTGCATGGAGGACGACGCACCCCACAAGAGAAGT...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS-3UTR GCA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACACTCTCGCTCGATGGTaGCCTGGCGCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHTLARW*PGAAPP
Trigger: TGGAGGAGCTGCGCCAGGGCACCATCGAGCGAGAGT...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTTGCAGATCTCCTCCATaGACTCTCGCTCGATGGTGC +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVCRSPP*TLARWC
Trigger: GCACCATCGAGCGAGAGTGCATGGAGGAGATCTGCA...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTGCAGATCTCCTCCATaGACTCTCGCTCGATGGTGC +
Preference number: 4 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGCRSPP*TLARWC
Trigger: GCACCATCGAGCGAGAGTGCATGGAGGAGATCTGCA...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAAGATGACAATCAGCAGTaGCACCCCCAGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQDDNQQ*HPQKGY
Trigger: GTACCCCTTCTGGGGGTGGCACTGCTGATTGTCATC...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGACTGGCACCTGGCAACAGCAGAGCAAACCCCATATGGGCCTTCAACCCCAGGGATGACAATCAGCAGTaGCACCCCCAGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: RLAPGNSRANPIWAFNPRDDNQQ*HPQKGY
Trigger: GTACCCCTTCTGGGGGTGGCACTGCTGATTGTCATC...CCTGGGGTTGAAGGCCCATATGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCTTCGCTGCCTCTCGGTaGCCAGAAGGCTCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPFAASR*PEGSPW
Trigger: CCAAGGGGAGCCTTCTGGGCACCGAGAGGCAGCGAA...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGCTGGGGGCTGTTCGCTaGCTCTCGGTGCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELLGAVR*LSVPRR
Trigger: CCTTCTGGGCACCGAGAGGCAGCGAACAGCCCCCAG...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTCAGTTAAAGGGCAGGTaGCTTCTGCCCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGQLKGR*LLPHCC
Trigger: ACAGCAGTGGGGCAGAAGGCACCTGCCCTTTAACTG...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCCAGCTGCAACTCAGATaGCAAAGGCAGCGGGCATTT +
Preference number: 4 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGQLQLR*QRQRAF
Trigger: AAATGCCCGCTGCCTTTGGCATCTGAGTTGCAGCTG...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGCACGCCAGGCACCTGTaGACCCCACTCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLHARHL*TPLLHL
Trigger: CAAGTGCAAGAGTGGGGTGCACAGGTGCCTGGCGTG...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCGAGCTTGAGAGGGTGTaGTATTTGGGTATGTTTGTC +
Preference number: 4 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTELERV*YLGMFV
Trigger: GACAAACATACCCAAATAGCACACCCTCTCAAGCTC...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGCCGAATGGGCATCCTTaGCCTCCAGAAACACTGCCA +
Preference number: 4 (lower is better)
Translates to: SHSPQARPVDILATINSMPNGHP*PPETLP
Trigger: TGGCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGG...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTCGTTTCAGGACCGAATaGGCATCCTTGGCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVRFRTE*ASLASR
Trigger: TCTGGAGGCCAAGGATGCCCATTCGGTCCTGAAACG...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674457.1
CDS-3UTR CCA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCAGAGTAGACTGCATTTaGGTACCCTTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLRVDCI*VPFPEL
Trigger: GAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCT...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CTGAGCATAGGAGGGGTGGTGACGGGTCGCTTTCTGCAGCTGGCACCTCCAGATGTACCACCACATACATaGCATCTGAGCTCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: LSIGGVVTGRFLQLAPPDVPPHT*HLSSAR
Trigger: CCTCGCAGAGCTCAGATGCCATGTATGTGGTGGTAC...ATCTGGAGGTGCCAGCTGCAGAAAGCGACCCGTCACCACCCCTCCTATGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CCA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGGTCGCTTTCTGCAGCTaGCACCTCCAGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGVAFCS*HLQMMN
Trigger: GTTCATCATCTGGAGGTGCCAGCTGCAGAAAGCGAC...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GGTCGCTTTCTGCAGCTGGCACCTCCAGATGATGAACAAGGCGATGACAATCAGTGTGCCCGGCGCGACTaGCTAGGTACCGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GRFLQLAPPDDEQGDDNQCARRD*LGTGSE
Trigger: CTCAGAACCGGTACCTAGCCAGTCGCGCCGGGCACA...CTGATTGTCATCGCCTTGTTCATCATCTGGAGGTGCCAGCTGCAGAAAGCGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGCACTGTAAGACACGCTaGCCTCCTCACTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQHCKTR*PPHCCS
Trigger: AGAGCAGCAGTGAGGAGGCCAGCGTGTCTTACAGTG...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGTCAGCGCCAGGGTTaGCGGCCACTATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: DRMLEAWGSSQRVGHFGLCQRQG*RPLSPR
Trigger: ACGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACA...AAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAAGGAAAGACAGGATGTTaGAGGCTTGGGGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQGKTGC*RLGGHP
Trigger: GGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCC...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGGAAAGACAGGATGTTaGAGGCTTGGGGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQGKTGC*RLGGHP
Trigger: GGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCC...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCGGGGTGCTGAAAGGCTaGCTTCCTTCCCTTACCCCT +
Preference number: 4 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICGVLKG*LPSLTP
Trigger: AGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCACCCC...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGCTCCTTCCAGGAGTGTaGGGACAGGTTTTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: APRQFKHFAGICSVSLQRLLPGV*GQVLGE
Trigger: CTCCCCTAAAACCTGTCCCCACACTCCTGGAAGGAG...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGTCCACGTGGGCCCCTTaGTCAATGTGGAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRSTWAP*SMWKRK
Trigger: TTTCCTCTTCCACATTGACCAAGGGGCCCACGTGGA...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCCAAAGCCTCACTGAAAACAGACTGGCACCTGGCAACAGCAGAGCAAACCCCAACCCCAGCCACAGGGTaGAGTGGTCCAAGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SKASLKTDWHLATAEQTPTPATG*SGPSWW
Trigger: CCACCAGCTTGGACCACTCCACCCTGTGGCTGGGGT...TGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTACGCAGCTGTGTGGGTaGTGTGTACACGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: DRMLEAWGSSQRVGHFGLTQLCG*CVHARH
Trigger: GTGCCTGGCGTGTACACACCACCCACACAGCTGCGT...AAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCCGATGCTCCACCCACTaGGAGAGGGGAAGCATCCGG +
Preference number: 4 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPRCSTH*ERGSIR
Trigger: CCGGATGCTTCCCCTCTCCCAGTGGGTGGAGCATCG...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATCCGAATGGGCATCCTTaGCCTGCCATGATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYPNGHP*PAMMLP
Trigger: AGGGAGCATCATGGCAGGCCAAGGATGCCCATTCGG...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674441.1
CDS-3UTR TCA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCGAGGGTAAGGGGTGCTaGAAGGCTGGCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPEGKGC*KAGFLP
Trigger: GGGAAGGAAGCCAGCCTTTCAGCACCCCTTACCCTC...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGTCCCTTGGCCTCCTATaGACGGCCCGGGTGCTAGAG +
Preference number: 4 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELSLGLL*TARVLE
Trigger: CTCTAGCACCCGGGCCGTTCATAGGAGGCCAAGGGA...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGAAGCACACTAGAAACTaGATGGCAGAGTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGKHTRN*MAESTW
Trigger: CCACGTGGACTCTGCCATTCAGTTTCTAGTGTGCTT...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTTGTCCAAAGCCTCACTaGAAACAGACTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPCPKPH*KQTGTW
Trigger: CCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGACA...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCGAAATGGTTTGGTGTTaGGGTCAGGAGGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSEMVWC*GQEDGD
Trigger: GTCTCCATCCTCCTGACCTCAACACCAAACCATTTC...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGCCTCCAACGGGCCTGTaGGGTAGGGGGAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELPPTGL*GRGKDG
Trigger: TCCATCCTTCCCCCTACCTCACAGGCCCGTTGGAGG...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCCCTGTCCTCAGCCCCTaGAGGACACATGTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: QVETQHQRHMRASAKTAPPVLSP*RTHVAL
Trigger: GAGGGCAACATGTGTCCTTCAGGGGCTGAGGACAGG...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCGTTTCAGATAAGCAATaGGAAAAGGCAACGTGCACA +
Preference number: 4 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTVSDKQ*EKATCT
Trigger: TGTGCACGTTGCCTTTTCTCATTGCTTATCTGAAAC...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCGGAAGCATCCGGCTCTaGCTACTTGACAAAAAGACA +
Preference number: 4 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFGSIRL*LLDKKT
Trigger: TGTCTTTTTGTCAAGTAGTCAGAGCCGGATGCTTCC...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTATATTTGGAGGCGAATaGTGGAGCGGCCAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGIFGGE*WSGQSD
Trigger: GTCAGACTGGCCGCTCCATCATTCGCCTCCAAATAT...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp TCCAAAGCCTCACTGAAAACAGACTGGCACCTGGCAACAGCAGAGCAAACCCCATGGCCTCCTCACTGCTaGTCTCTTGGGGCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SKASLKTDWHLATAEQTPWPPHC*SLGAQS
Trigger: TGACTGCGCCCCAAGAGAGCAGCAGTGAGGAGGCCA...TGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTGGCCTCCTCACTGCTaGTCTCTTGGGGCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHWPPHC*SLGAQS
Trigger: TGACTGCGCCCCAAGAGAGCAGCAGTGAGGAGGCCA...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAACGCTGGCCTCCTCACTaGTGCTCTCTTGGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQRWPPH*CSLGAQ
Trigger: CTGCGCCCCAAGAGAGCAGCAGTGAGGAGGCCAGCG...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTAATGCCACGTTTCCTTaGTCAGGGCCCTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPNATFP*SGPCHQ
Trigger: CTGATGACAGGGCCCTGAGCAAGGAAACGTGGCATT...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGCGAGAAGTGCTGAACTaGAAAGCTGAAGGCACGGTG +
Preference number: 4 (lower is better)
Translates to: SHSPQARPVDILATINSMREVLN*KAEGTV
Trigger: CACCGTGCCTTCAGCTTTGCAGTTCAGCACTTCTCG...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCAGCAAGTTTGTCTGTTaGCCCCAGGCTCCAATGAAA +
Preference number: 4 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFSKFVC*PQAPMK
Trigger: TTTCATTGGAGCCTGGGGGCAACAGACAAACTTGCT...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGTACCACCACATACATaGCATCTGAGCTCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: APRQFKHFAGICSVSLQRVPPHT*HLSSAR
Trigger: CCTCGCAGAGCTCAGATGCCATGTATGTGGTGGTAC...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGTACCACCACATACATaGCATCTGAGCTCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQVPPHT*HLSSAR
Trigger: CCTCGCAGAGCTCAGATGCCATGTATGTGGTGGTAC...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTGCTGAAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACGTACCACCACATACATaGCATCTGAGCTCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: VLKGWLPSLTPEAQSSRHVPPHT*HLSSAR
Trigger: CCTCGCAGAGCTCAGATGCCATGTATGTGGTGGTAC...GTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTGTCGCTTTCTGCAGCTaGCACCTCCAGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPVAFCS*HLQMMN
Trigger: GTTCATCATCTGGAGGTGCCAGCTGCAGAAAGCGAC...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTCACTGCTGCTCTCTTaGGGCGCAGTCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHSLLLS*GAVTSS
Trigger: CGAGGAGGTGACTGCGCCCCAAGAGAGCAGCAGTGA...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCCTCGTACTTTGGGGGTaGGTCACTGTAAGACACGCT +
Preference number: 4 (lower is better)
Translates to: GGLGVIPKSWALWPLALPLVLWG*VTVRHA
Trigger: AGCGTGTCTTACAGTGACCCACCCCCAAAGTACGAG...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTGCTGAAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACCTCGTACTTTGGGGGTaGGTCACTGTAAGACACGCT +
Preference number: 4 (lower is better)
Translates to: VLKGWLPSLTPEAQSSRHLVLWG*VTVRHA
Trigger: AGCGTGTCTTACAGTGACCCACCCCCAAAGTACGAG...GTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGCTTCGACTCATGCGTaGTCCCTACCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELASTHA*SLPPPS
Trigger: GGAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGC...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGGGCCTGTGGACATTCTaGCCACAATCAACTCAATGG +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRGLWTF*PQSTQW
Trigger: CCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCC...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGCCCCTTGGTCAATGTaGAAGAGGAAACTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQAPWSM*KRKLCH
Trigger: GTGGCAGAGTTTCCTCTTCCACATTGACCAAGGGGC...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCTCCACGTGGGCCCCTTaGTCAATGTGGAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GGLGVIPKSWALWPLALPSTWAP*SMWKRK
Trigger: TTTCCTCTTCCACATTGACCAAGGGGCCCACGTGGA...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGCACAAGCCTTCTAACTaGAAGCACGTCCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: APRQFKHFAGICSVSLQRHKPSN*KHVPGQ
Trigger: TTGCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTG...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCTGGAGTGGTCCAAGCTaGTGGCCTCACTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: QVETQHQRHMRASAKTAPWSGPS*WPHWGR
Trigger: CCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCA...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTGGCATCAGGGAGCTCTaGAAAGGGAGGACGAGAGGA +
Preference number: 4 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPGIREL*KGRTRG
Trigger: TCCTCTCGTCCTCCCTTTCCAGAGCTCCCTGATGCC...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTGCAGCGGGCATTTCTTaGCAAACTCCCTTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGAAGIS*QTPFGS
Trigger: AGAGCCAAAGGGAGTTTGCCAAGAAATGCCCGCTGC...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCACTCTTGCACTTGTGCTTTCATTTTGAAAACCGGAGGCGATGGGAAGCGGGGACATGTTGCCCTCCATaGGCCAGGCCTTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PLLHLCFHFENRRRWEAGTCCPP*ARPWAS
Trigger: AGAGGCCCAAGGCCTGGCCCATGGAGGGCAACATGT...CCCCGCTTCCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAGTGCAAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGTGGTGCAACCCCACCTaGCAGAACACCATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: APRQFKHFAGICSVSLQRWCNPT*QNTMKH
Trigger: ATGCTTCATGGTGTTCTGCCAGGTGGGGTTGCACCA...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCTGGTGCAACCCCACCTaGCAGAACACCATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: GGLGVIPKSWALWPLALPWCNPT*QNTMKH
Trigger: ATGCTTCATGGTGTTCTGCCAGGTGGGGTTGCACCA...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTTGGTGCAACCCCACCTaGCAGAACACCATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPWCNPT*QNTMKH
Trigger: ATGCTTCATGGTGTTCTGCCAGGTGGGGTTGCACCA...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCAGACCGGATCCCTCCTaGTACAAATATAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFRPDPS*YKYSCT
Trigger: TGTGCAGCTATATTTGTACCAGGAGGGATCCGGTCT...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCGGGGGTTGCATAGGGTaGAGACCTGCAGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: SEPNITGLKQPPVTLPTAGGCIG*RPAEWS
Trigger: GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCC...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGTCAAAAGATCAACTCTaGCTGGGGGTTGCGATGCTC +
Preference number: 4 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGSKDQL*LGVAML
Trigger: GAGCATCGCAACCCCCAGCCAGAGTTGATCTTTTGA...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGACCTCAGAGATAGATaGGGAGATACAGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: APRQFKHFAGICSVSLQRDLRDR*GDTAQR
Trigger: TCTCTGGGCTGTATCTCCTCATCTATCTCTGAGGTC...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS-3UTR TCA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCCACATACATGGCATCTaGGCTCTGCGAGGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPHIHGI*ALRGVS
Trigger: CGAGACCCCTCGCAGAGCTCAGATGCCATGTATGTG...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGAGAGAAGCCAGTTCCTaGTGGAAAGACAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGREASS*WKDRML
Trigger: CAACATCCTGTCTTTCCATCAGGAACTGGCTTCTCT...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGAGGGTAAGGGGTGCTaGAAGGCTGGCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELEGKGC*KAGFLP
Trigger: GGGAAGGAAGCCAGCCTTTCAGCACCCCTTACCCTC...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTAACATCAGAGGCATATaGGGGCCTCAGCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGNIRGI*GPQLRL
Trigger: CAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTT...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGATGGAAAGGGTCAACTaGCGGGAGATTGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: SHSPQARPVDILATINSMMERVN*REIDSP
Trigger: TGGAGAGTCAATCTCCCGTCAGTTGACCCTTTCCAT...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATAACTCCCTTTGGCTCTaGTCAGTGGAGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYNSLWL*SVELMP
Trigger: AGGCATGAGCTCCACTGATCAGAGCCAAAGGGAGTT...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GTGCTGAAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACTCTCAGCCTCAACTGTaGGTGTCCACACATGAGACA +
Preference number: 4 (lower is better)
Translates to: VLKGWLPSLTPEAQSSRHSQPQL*VSTHET
Trigger: TGTCTCATGTGTGGACACTCACAGTTGAGGCTGAGA...GTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATCTCAGCCTCAACTGTaGGTGTCCACACATGAGACA +
Preference number: 4 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQSQPQL*VSTHET
Trigger: TGTCTCATGTGTGGACACTCACAGTTGAGGCTGAGA...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCATATTTGGAGGCGAATaGTGGAGCGGCCAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICIFGGE*WSGQSD
Trigger: GTCAGACTGGCCGCTCCATCATTCGCCTCCAAATAT...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp CATACATGGCATCTGAGCTCTGCGAGGGGTCTCGGACAGAGTAGACTGCATTTGGGCCTCCAGAAACACTaGGGAGAGAGCCCTACTGAG +
Preference number: 4 (lower is better)
Translates to: HTWHLSSARGLGQSRLHLGLQKH*GESPTE
Trigger: CTCAGTAGGGCTCTCTCCTCAGTGTTTCTGGAGGCC...CAAATGCAGTCTACTCTGTCCGAGACCCCTCGCAGAGCTCAGATGCCATGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR TCA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCATCCTTGGCCTGCCATaGTGCTCCCTCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CPGVLRFLSAADTHRTEAILGLP*CSLSCR
Trigger: CCTGCAGCTGAGGGAGCATCATGGCAGGCCAAGGAT...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674441.1
CDS-3UTR GCA 90 bp GCTCTGCGAGGGGTCTCGGACAGAGTAGACTGCATTTGGGTACCCTTTCCAGAATGCAGATCTCCTCCATaGACTCTCGCTCGATGGTGC +
Preference number: 4 (lower is better)
Translates to: ALRGVSDRVDCIWVPFPECRSPP*TLARWC
Trigger: GCACCATCGAGCGAGAGTGCATGGAGGAGATCTGCA...TTCTGGAAAGGGTACCCAAATGCAGTCTACTCTGTCCGAGACCCCTCGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR GCA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCTCGGACAGAGTAGACTaGATTTGGGTACCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSSDRVD*IWVPFP
Trigger: TGGAAAGGGTACCCAAATGCAGTCTACTCTGTCCGA...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCATGGCATCTGAGCTCTaGGAGGGGTCTCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPMASEL*EGSRTE
Trigger: CTCTGTCCGAGACCCCTCGCAGAGCTCAGATGCCAT...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACATGGCATCTGAGCTCTaGGAGGGGTCTCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHMASEL*EGSRTE
Trigger: CTCTGTCCGAGACCCCTCGCAGAGCTCAGATGCCAT...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGATGACAATCAGCAGTaGCACCCCCAGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLDDNQQ*HPQKGY
Trigger: GTACCCCTTCTGGGGGTGGCACTGCTGATTGTCATC...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATGGGGGCTTCGACTCATaGGTGGTCCCTACCCCCACC +
Preference number: 4 (lower is better)
Translates to: RPVDILATINSMGLFLWHGGFDS*VVPTPT
Trigger: GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCC...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTCACTTCGCAGGCATTTaGTCAGTCAGCCTCCAACGG +
Preference number: 4 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPHFAGI*SVSLQR
Trigger: CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTG...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CCACTCTTGCACTTGTGCTTTCATTTTGAAAACCGGAGGCGATGGGAAGCGGGGGATGAAGGGCAGGAGTaGAATGCTGAAGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PLLHLCFHFENRRRWEAGDEGQE*NAEGPG
Trigger: CCCTGGGCCTTCAGCATTGCACTCCTGCCCTTCATC...CCCCGCTTCCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAGTGCAAGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACGATGAAGGGCAGGAGTaGAATGCTGAAGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHDEGQE*NAEGPG
Trigger: CCCTGGGCCTTCAGCATTGCACTCCTGCCCTTCATC...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCCTGAAGGACACATGTTaGCCTCCATGGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QVETQHQRHMRASAKTAPLKDTC*PPWARP
Trigger: AGGCCTGGCCCATGGAGGGCAACATGTGTCCTTCAG...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTGCAAGGAGTGATGCCTaGTGTGTGCTGTACAGTCTT +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVARSDA*CVLYSL
Trigger: AAGACTGTACAGCACACAGCAGGCATCACTCCTTGC...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGCCTGCAGAATGGAGCTaGTTTGTCTTCTTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGPAEWS*FVFFQS
Trigger: GCTTTGGAAGAAGACAAAGCAGCTCCATTCTGCAGG...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCCTCCCGGGGCTGACTaGTCAGCACTGCGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RAGTVQQSDISTVKQLLRPPGAD*SALRLP
Trigger: AGGGAGACGCAGTGCTGAGCAGTCAGCCCCGGGAGG...CCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCGAGCTTGAGAGGGTGTaGTATTTGGGTATGTTTGTC +
Preference number: 4 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFELERV*YLGMFV
Trigger: GACAAACATACCCAAATAGCACACCCTCTCAAGCTC...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAAGGCGGCCGCCCTGTTTaGGCACGCAGCCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREGGRPV*ARSPPP
Trigger: AGGTGGCGGGCTGCGTGCGCAAACAGGGCGGCCGCC...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATCTCGTACTTTGGGGGTaGGTCACTGTAAGACACGCT +
Preference number: 4 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYLVLWG*VTVRHA
Trigger: AGCGTGTCTTACAGTGACCCACCCCCAAAGTACGAG...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGAGGATGTTGGAGGCTTaGGGGTCATCCCAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: SHSPQARPVDILATINSMRMLEA*GSSQRV
Trigger: AACTCTTTGGGATGACCCCCAAGCCTCCAACATCCT...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCAGGATGTTGGAGGCTTaGGGGTCATCCCAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: GGLGVIPKSWALWPLALPRMLEA*GSSQRV
Trigger: AACTCTTTGGGATGACCCCCAAGCCTCCAACATCCT...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGGCCTGTGGACATTCTaGCCACAATCAACTCAATGG +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQGLWTF*PQSTQW
Trigger: CCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCC...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTGGCCTGTGGACATTCTaGCCACAATCAACTCAATGG +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVGLWTF*PQSTQW
Trigger: CCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCC...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAAGGCCTGTGGACATTCTaGCCACAATCAACTCAATGG +
Preference number: 4 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQGLWTF*PQSTQW
Trigger: CCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCC...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCCCCAGGCCAGGCCTGTaGACATTCTGGCCACAATCA +
Preference number: 4 (lower is better)
Translates to: QVETQHQRHMRASAKTAPPRPGL*TFWPQS
Trigger: TGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGG...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCGGGGTGCTGAAAGGCTaGCTTCCTTCCCTTACCCCT +
Preference number: 4 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPGVLKG*LPSLTP
Trigger: AGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCACCCC...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGTGATAAATTTCCCTTaGCCTCCTATGAACGGCCCG +
Preference number: 4 (lower is better)
Translates to: SHSPQARPVDILATINSMVINFP*PPMNGP
Trigger: CGGGCCGTTCATAGGAGGCCAAGGGAAATTTATCAC...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTGTGATAAATTTCCCTTaGCCTCCTATGAACGGCCCG +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVVINFP*PPMNGP
Trigger: CGGGCCGTTCATAGGAGGCCAAGGGAAATTTATCAC...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCATGGCAGAGTCCACGTaGGCCCCTTGGTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: QVETQHQRHMRASAKTAPMAEST*APWSMW
Trigger: CCACATTGACCAAGGGGCCCACGTGGACTCTGCCAT...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCACTCTTGCACTTGTGCTTTCATTTTGAAAACCGGAGGCGATGGGAAGCGGGGATGGCAGAGTCCACGTaGGCCCCTTGGTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: PLLHLCFHFENRRRWEAGMAEST*APWSMW
Trigger: CCACATTGACCAAGGGGCCCACGTGGACTCTGCCAT...CCCCGCTTCCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAGTGCAAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGAGAGCAAACCCCATATaGGCCTTCAACCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLRANPI*AFNPRP
Trigger: TGGCCTGGGGTTGAAGGCCCATATGGGGTTTGCTCT...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCCAAAGCCTCACTGAAAACAGACTGGCACCTGGCAACAGCAGAGCAAACCCCAGGCATCAGGGAGCTCTaGAAAGGGAGGACGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SKASLKTDWHLATAEQTPGIREL*KGRTRG
Trigger: TCCTCTCGTCCTCCCTTTCCAGAGCTCCCTGATGCC...TGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCACGCAGCTGTGTGGGTaGTGTGTACACGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: CPGVLRFLSAADTHRTEATQLCG*CVHARH
Trigger: GTGCCTGGCGTGTACACACCACCCACACAGCTGCGT...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAAAGAGGCAAAAGCAGCTaGGGGATTTGTCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQRGKSS*GICPNP
Trigger: AGGATTGGGACAAATCCCCCAGCTGCTTTTGCCTCT...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGCCTTGCTCCCCTCAATaGATCTTTGCAACTTCCAAT +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRPCSPQ*IFATSN
Trigger: ATTGGAAGTTGCAAAGATTCATTGAGGGGAGCAAGG...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS-3UTR TCA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCTCAAACACTTCCTTaGCCTCCTCGTAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICSQTLP*PPRSCR
Trigger: TCTGCAGCTACGAGGAGGTCAAGGAAGTGTTTGAGA...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGAGAGAAGCCAGTTCCTaGTGGAAAGACAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQREASS*WKDRML
Trigger: CAACATCCTGTCTTTCCATCAGGAACTGGCTTCTCT...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAAAGAGAAGCCAGTTCCTaGTGGAAAGACAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQREASS*WKDRML
Trigger: CAACATCCTGTCTTTCCATCAGGAACTGGCTTCTCT...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCAAGCACACTAGAAACTaGATGGCAGAGTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICKHTRN*MAESTW
Trigger: CCACGTGGACTCTGCCATTCAGTTTCTAGTGTGCTT...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCTTAAGCAACCTCCTGTaGCTCTTCCCACGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPLSNLL*LFPRPV
Trigger: GACAGGCCGTGGGAAGAGTCACAGGAGGTTGCTTAA...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TCCAAAGCCTCACTGAAAACAGACTGGCACCTGGCAACAGCAGAGCAAACCCCAGTGCATCGCAAGGAGTaGTGCCTGCTGTGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SKASLKTDWHLATAEQTPVHRKE*CLLCAV
Trigger: TACAGCACACAGCAGGCATCACTCCTTGCGATGCAC...TGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGACACTTTCCTGTCCTaGATTCCTCATATTCGGGCT +
Preference number: 4 (lower is better)
Translates to: APRQFKHFAGICSVSLQRDTFLS*IPHIRA
Trigger: AGCCCGAATATGAGGAATTCAGGACAGGAAAGTGTC...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAAACATACGAGAAGTGCTaGACTGCAAAGCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQTYEKC*TAKLKA
Trigger: TGCCTTCAGCTTTGCAGTTCAGCACTTCTCGTATGT...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCCGCTGCTTCTCATTCTaGCCCAAGCTCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SEPNITGLKQPPVTLPTARCFSF*PKLFSR
Trigger: TCTGGAGAAGAGCTTGGGGCAGAATGAGAAGCAGCG...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS-3UTR GCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACACTCTCGCTCGATGGTaGCCTGGCGCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNTLARW*PGAAPP
Trigger: TGGAGGAGCTGCGCCAGGGCACCATCGAGCGAGAGT...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCTGCAGATCTCCTCCATaGACTCTCGCTCGATGGTGC +
Preference number: 4 (lower is better)
Translates to: QVETQHQRHMRASAKTAPCRSPP*TLARWC
Trigger: GCACCATCGAGCGAGAGTGCATGGAGGAGATCTGCA...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATCGGACAGAGTAGACTaGATTTGGGTACCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQSDRVD*IWVPFP
Trigger: TGGAAAGGGTACCCAAATGCAGTCTACTCTGTCCGA...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGTCGGACAGAGTAGACTaGATTTGGGTACCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQSDRVD*IWVPFP
Trigger: TGGAAAGGGTACCCAAATGCAGTCTACTCTGTCCGA...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CGCTTTCTGCAGCTGGCACCTCCAGATGATGAACAAGGCGATGACAATCAGCAGGATGACAATCAGCAGTaGCACCCCCAGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: RFLQLAPPDDEQGDDNQQDDNQQ*HPQKGY
Trigger: GTACCCCTTCTGGGGGTGGCACTGCTGATTGTCATC...CTGCTGATTGTCATCGCCTTGTTCATCATCTGGAGGTGCCAGCTGCAGAAAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR GCA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGAATAGACGCAGGCCATaGATTCTTGCACCACACAAA +
Preference number: 4 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGNRRRP*ILAPHK
Trigger: TTTGTGTGGTGCAAGAATGCATGGCCTGCGTCTATT...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCAAGTTTCTTCTCACCTaGTCCCAGGTCACACTCTGG +
Preference number: 4 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICKFLLT*SQVTLW
Trigger: CCAGAGTGTGACCTGGGAGCAGGTGAGAAGAAACTT...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGCATAAAATCCAAGTGTaGATCGCAAGGAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRHKIQV*IARSDA
Trigger: GGCATCACTCCTTGCGATGCACACTTGGATTTTATG...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGCCTGCAGAATGGAGCTaGTTTGTCTTCTTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQPAEWS*FVFFQS
Trigger: GCTTTGGAAGAAGACAAAGCAGCTCCATTCTGCAGG...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGCCCGCCACCTCGCTaGTGCGCCTCTTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHSPPPR*CASSSR
Trigger: CCTGCTGGAAGAGGCGCAGCAGCGAGGTGGCGGGCT...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674457.1
CDS-3UTR CCA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATTGTGCCCGGCGCGACTaGCTAGGTACCGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RPVDILATINSMGLFLWHCARRD*LGTGSE
Trigger: CTCAGAACCGGTACCTAGCCAGTCGCGCCGGGCACA...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAACCAGAAGGCTCCCCTTaGCTATGCACAGTACCCCGG +
Preference number: 4 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQPEGSP*LCTVPR
Trigger: CCGGGGTACTGTGCATAGCCAAGGGGAGCCTTCTGG...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACGGCCCCAGCACCACCTaGGGGCTGTTCGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHGPSTT*GLFAAS
Trigger: AGAGGCAGCGAACAGCCCCCAGGTGGTGCTGGGGCC...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TTCAATTTCAATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTGGCCCCAGCACCACCTaGGGGCTGTTCGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: FNFNAPFAKSRLMPVGSGGPSTT*GLFAAS
Trigger: AGAGGCAGCGAACAGCCCCCAGGTGGTGCTGGGGCC...ACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCATTGAAATTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGCTCGTACTTTGGGGGTaGGTCACTGTAAGACACGCT +
Preference number: 4 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLLVLWG*VTVRHA
Trigger: AGCGTGTCTTACAGTGACCCACCCCCAAAGTACGAG...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATATCTCCTCGTACTTTaGGGGTGGGTCACTGTAAGA +
Preference number: 4 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQYLLVL*GWVTVR
Trigger: TCTTACAGTGACCCACCCCCAAAGTACGAGGAGATA...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTGAAATCACAGAACTGTaGAGGGTAAGGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPEITEL*RVRGAE
Trigger: TTCAGCACCCCTTACCCTCCACAGTTCTGTGATTTC...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTGAAATCACAGAACTGTaGAGGGTAAGGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVEITEL*RVRGAE
Trigger: TTCAGCACCCCTTACCCTCCACAGTTCTGTGATTTC...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATGCTGGTCCACATGTCTaGAGAGACAAGCACACTAGA +
Preference number: 4 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYAGPHV*RDKHTR
Trigger: TCTAGTGTGCTTGTCTCTCCAGACATGTGGACCAGC...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTTGGTTTGAACACAGCTaGTCCACATGTCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVWFEHS*STCLER
Trigger: TCTCTCCAGACATGTGGACCAGCTGTGTTCAAACCA...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCAAACAGACTGGCACCTaGCAACAGCAGAGCAAACCC +
Preference number: 4 (lower is better)
Translates to: SEPNITGLKQPPVTLPTAKQTGT*QQQSKP
Trigger: GGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTT...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACGAAAACCGGAGGCGATaGGAAGCGGGGGAGGGACAG +
Preference number: 4 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNENRRR*EAGEGQ
Trigger: CTGTCCCTCCCCCGCTTCCCATCGCCTCCGGTTTTC...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCAAGATCAACTCTGGCTaGGGGTTGCGATGCTCCACC +
Preference number: 4 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPKINSG*GLRCST
Trigger: GGTGGAGCATCGCAACCCCCAGCCAGAGTTGATCTT...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCAAAAGATCAACTCTaGCTGGGGGTTGCGATGCTC +
Preference number: 4 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYSKDQL*LGVAML
Trigger: GAGCATCGCAACCCCCAGCCAGAGTTGATCTTTTGA...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATAGAGGCAAAAGCAGCTaGGGGATTTGTCCCAATCCT +
Preference number: 4 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYRGKSS*GICPNP
Trigger: AGGATTGGGACAAATCCCCCAGCTGCTTTTGCCTCT...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATCGATGAGGGGAGATaGATTGAGAGGCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVIDEGR*IERQKQ
Trigger: CTGCTTTTGCCTCTCAATCCATCTCCCCTCATCGAT...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCCGTTTCAGGACCGAATaGGCATCCTTGGCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPRFRTE*ASLACH
Trigger: ATGGCAGGCCAAGGATGCCCATTCGGTCCTGAAACG...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674441.1
3UTR CAA 72 bp AGCCAGTTCCTGATGGAAAGACAGGATGTTGGAGGCTaGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SQFLMERQDVGG*GVIPKSWALWP
Trigger: AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAACTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCCCCAAGAACATGTTCTaGGCATCTATAAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSPKNMF*ASIRTK
Trigger: CTTGGTTCTTATAGATGCTCAGAACATGTTCTTGGG...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS-3UTR TCA 90 bp CCACATACATGGCATCTGAGCTCTGCGAGGGGTCTCGGACAGAGTAGACTGCATTCTCAAACACTTCCTTaGCCTCCTCGTAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PHTWHLSSARGLGQSRLHSQTLP*PPRSCR
Trigger: TCTGCAGCTACGAGGAGGTCAAGGAAGTGTTTGAGA...ATGCAGTCTACTCTGTCCGAGACCCCTCGCAGAGCTCAGATGCCATGTATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR TCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTCTCAAACACTTCCTTaGCCTCCTCGTAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPSQTLP*PPRSCR
Trigger: TCTGCAGCTACGAGGAGGTCAAGGAAGTGTTTGAGA...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAATACCCCGGTACACCATaGCCCGGGGGAGGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREYPGTP*PGGGCA
Trigger: GGCACACCCTCCCCCGGGTCATGGTGTACCGGGGTA...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATAGAGAAGCCAGTTCCTaGTGGAAAGACAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYREASS*WKDRML
Trigger: CAACATCCTGTCTTTCCATCAGGAACTGGCTTCTCT...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCAAGCACACTAGAAACTaGATGGCAGAGTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: SEPNITGLKQPPVTLPTAKHTRN*MAESTW
Trigger: CCACGTGGACTCTGCCATTCAGTTTCTAGTGTGCTT...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AGACTGGCACCTGGCAACAGCAGAGCAAACCCCATATGGGCCTTCAACCCCAGGCTGCATTCAAGGAAATaGGTCCCAATGTCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: RLAPGNSRANPIWAFNPRLHSRK*VPMSAL
Trigger: TAAGGCAGACATTGGGACTCATTTCCTTGAATGCAG...CCTGGGGTTGAAGGCCCATATGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTCTGCATTCAAGGAAATaGGTCCCAATGTCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVLHSRK*VPMSAL
Trigger: TAAGGCAGACATTGGGACTCATTTCCTTGAATGCAG...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGGTTTCAGATAAGCAATaGGAAAAGGCAACGTGCACA +
Preference number: 4 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGVSDKQ*EKATCT
Trigger: TGTGCACGTTGCCTTTTCTCATTGCTTATCTGAAAC...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCGTTTCAGATAAGCAATaGGAAAAGGCAACGTGCACA +
Preference number: 4 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGVSDKQ*EKATCT
Trigger: TGTGCACGTTGCCTTTTCTCATTGCTTATCTGAAAC...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCAGTGGGATTGGAAGTTaGAAAAGAGGCCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: CPGVLRFLSAADTHRTEASGIGS*KRGLPG
Trigger: CCCCGGGAGGCCTCTTTTTCAACTTCCAATCCCACT...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGTATCCAACATCCCTGTaGTGGAGAGAGAACAAGAGA +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQYPTSL*WRENKR
Trigger: TCTCTTGTTCTCTCTCCATCACAGGGATGTTGGATA...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp CCACATACATGGCATCTGAGCTCTGCGAGGGGTCTCGGACAGAGTAGACTGCATTGTTCTTGCTATTCCTaGGGCTACTCCTACTCCCAG +
Preference number: 4 (lower is better)
Translates to: PHTWHLSSARGLGQSRLHCSCYS*GYSYSQ
Trigger: CTGGGAGTAGGAGTAGCCTCAGGAATAGCAAGAACA...ATGCAGTCTACTCTGTCCGAGACCCCTCGCAGAGCTCAGATGCCATGTATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR TCA 90 bp AGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGATGGAGCGGCCAGTCTaGCAGCGAAGCATCTGCGGT +
Preference number: 4 (lower is better)
Translates to: RAGTVQQSDISTVKQLLRMERPV*QRSICG
Trigger: ACCGCAGATGCTTCGCTGTCAGACTGGCCGCTCCAT...CCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448324.1
CDS-3UTR GCA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGTGCAGATCTCCTCCATaGACTCTCGCTCGATGGTGC +
Preference number: 4 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELCRSPP*TLARWC
Trigger: GCACCATCGAGCGAGAGTGCATGGAGGAGATCTGCA...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACGGGGGCTTCGACTCATaGGTGGTCCCTACCCCCACC +
Preference number: 4 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHGGFDS*VVPTPT
Trigger: GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCC...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGGGGGGCTTCGACTCATaGGTGGTCCCTACCCCCACC +
Preference number: 4 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGGGFDS*VVPTPT
Trigger: GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCC...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
53% GC, longest homopolymer 8 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCTGGTACAAATATAGCTaGACACCGGCTATTGTTTCA +
Preference number: 4 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFWYKYS*TPAIVS
Trigger: TGAAACAATAGCCGGTGTGCAGCTATATTTGTACCA...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACCGTGTGAGCGGGGGTTaGATAGGGTGGAGACCTGCA +
Preference number: 4 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNRVSGG*IGWRPA
Trigger: TGCAGGTCTCCACCCTATGCAACCCCCGCTCACACG...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GATTTTAAATTGCTGTGGTTGCCAATAGACGCAGGCCATGCATTCTTGCACCACACTCTGGCTGGGGGTTaGGATGCTCCACCCACTGGG +
Preference number: 4 (lower is better)
Translates to: DFKLLWLPIDAGHAFLHHTLAGG*DAPPTG
Trigger: CCCAGTGGGTGGAGCATCGCAACCCCCAGCCAGAGT...GTGGTGCAAGAATGCATGGCCTGCGTCTATTGGCAACCACAGCAATTTAAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGCTAGACCAGCAGCTCTaGTGCCAAGATATCCATCTC +
Preference number: 4 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLLDQQL*CQDIHL
Trigger: GAGATGGATATCTTGGCAGCAGAGCTGCTGGTCTAG...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp GATGACAATCAGCAGTGCCACCCCCAGAAGGGGTACCACCACATACATGGCATCCCCCAGGGTGGTACATaGCGTTTTCTCTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: DDNQQCHPQKGYHHIHGIPQGGT*RFLFVL
Trigger: GAGAACAAAGAGAAAACGGCATGTACCACCCTGGGG...GATGCCATGTATGTGGTGGTACCCCTTCTGGGGGTGGCACTGCTGATTGTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR GCA 90 bp ATAGGAGGGGTGGTGACGGGTCGCTTTCTGCAGCTGGCACCTCCAGATGATGAAGAACTCCATTTTATCTaGTCCGTGATGGCCCTAGTG +
Preference number: 4 (lower is better)
Translates to: IGGVVTGRFLQLAPPDDEELHFI*SVMALV
Trigger: CACTAGGGCCATCACGGAGCAGATAAAATGGAGTTC...TTCATCATCTGGAGGTGCCAGCTGCAGAAAGCGACCCGTCACCACCCCTCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CCA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCAGAGTAGACTGCATTTaGGTACCCTTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: GGLGVIPKSWALWPLALPRVDCI*VPFPEL
Trigger: GAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCT...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACGTACCACCACATACATaGCATCTGAGCTCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHVPPHT*HLSSAR
Trigger: CCTCGCAGAGCTCAGATGCCATGTATGTGGTGGTAC...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCCAGAAGGCTCCCCTTaGCTATGCACAGTACCCCGG +
Preference number: 4 (lower is better)
Translates to: RAGTVQQSDISTVKQLLRPEGSP*LCTVPR
Trigger: CCGGGGTACTGTGCATAGCCAAGGGGAGCCTTCTGG...CCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTGGCCCCAGCACCACCTaGGGGCTGTTCGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFGPSTT*GLFAAS
Trigger: AGAGGCAGCGAACAGCCCCCAGGTGGTGCTGGGGCC...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGTGGTGCTGGACAGTCTaGAGAGAGAGAGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELWCWTV*RERAQG
Trigger: TCCCTGAGCTCTCTCTCTCCAGACTGTCCAGCACCA...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATTCACTGCTGCTCTCTTaGGGCGCAGTCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RPVDILATINSMGLFLWHSLLLS*GAVTSS
Trigger: CGAGGAGGTGACTGCGCCCCAAGAGAGCAGCAGTGA...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAGGAGGCAAACAGTGACAACTTTGGGGGTTGGGTGTCCAATATAGTTAATGCCGCTTCGACTCATGCGTaGTCCCTACCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: KEANSDNFGGWVSNIVNAASTHA*SLPPPS
Trigger: GGAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGC...GGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACGCCCCTTGGTCAATGTaGAAGAGGAAACTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHAPWSM*KRKLCH
Trigger: GTGGCAGAGTTTCCTCTTCCACATTGACCAAGGGGC...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTCAACAGTGTCTAGCATaGTCACTGACAGTTAAAGGG +
Preference number: 4 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGQQCLA*SLTVKG
Trigger: CCCTTTAACTGTCAGTGACCATGCTAGACACTGTTG...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTATTCACCAGCATCTCTaGCATCAGGGAGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPIHQHL*HQGALE
Trigger: TTCCAGAGCTCCCTGATGCCAGAGATGCTGGTGAAT...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATCACAGAACAGAAGCCTaGGCCAGGGGCACCATGCCA +
Preference number: 4 (lower is better)
Translates to: RPVDILATINSMGLFLWHHRTEA*ARGTMP
Trigger: TGGCATGGTGCCCCTGGCCCAGGCTTCTGTTCTGTG...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATCATGGCAGTGGGATTaGAAGTTGAAAAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQSWQWD*KLKKRP
Trigger: AGGCCTCTTTTTCAACTTCCAATCCCACTGCCATGA...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCTCTCAAACACTTCCTTaGCCTCCTCGTAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPSQTLP*PPRSCR
Trigger: TCTGCAGCTACGAGGAGGTCAAGGAAGTGTTTGAGA...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACCACATACATGGCATCTaGGCTCTGCGAGGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNHIHGI*ALRGVS
Trigger: CGAGACCCCTCGCAGAGCTCAGATGCCATGTATGTG...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTAGAGAAGCCAGTTCCTaGTGGAAAGACAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPREASS*WKDRML
Trigger: CAACATCCTGTCTTTCCATCAGGAACTGGCTTCTCT...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCATGGAAAGGGTCAACTaGCGGGAGATTGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: QVETQHQRHMRASAKTAPMERVN*REIDSP
Trigger: TGGAGAGTCAATCTCCCGTCAGTTGACCCTTTCCAT...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGATTTCTTTCAGCTGCTaGCACCCACAGAACAGAAGC +
Preference number: 4 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLISFSC*HPQNRS
Trigger: GCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAAT...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGCTTGTGCTTTCATTTTaGAAACCGGAGGCGATGGGA +
Preference number: 4 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLLVLSF*KPEAMG
Trigger: TCCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAG...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACAAGACAGAGCCTCCGTaGGCGAGAGAGACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNKTEPP*ARETLS
Trigger: GGAGAGAGTCTCTCTCGCTCACGGAGGCTCTGTCTT...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGAATAACGGAGTAGAGTaGAAGGCTGCAATATCCAAC +
Preference number: 4 (lower is better)
Translates to: SHSPQARPVDILATINSMNNGVE*KAAISN
Trigger: GTTGGATATTGCAGCCTTTCACTCTACTCCGTTATT...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp GACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTCGGACAGAGTAGACTaGATTTGGGTACCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: DRMLEAWGSSQRVGHFGLSDRVD*IWVPFP
Trigger: TGGAAAGGGTACCCAAATGCAGTCTACTCTGTCCGA...AAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACATGGCATCTGAGCTCTaGGAGGGGTCTCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNMASEL*EGSRTE
Trigger: CTCTGTCCGAGACCCCTCGCAGAGCTCAGATGCCAT...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AAGGAGGCAAACAGTGACAACTTTGGGGGTTGGGTGTCCAATATAGTTAATGCCTGGAAGAGGAAACTCTaGCACCCAGCCCTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KEANSDNFGGWVSNIVNAWKRKL*HPALWP
Trigger: GGGCCAGAGGGCTGGGTGGCAGAGTTTCCTCTTCCA...GGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTCAGGCCATGCATTCTTaGACCACACAAAAATTTGCT +
Preference number: 4 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPQAMHS*TTQKFA
Trigger: AGCAAATTTTTGTGTGGTGCAAGAATGCATGGCCTG...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCCAGGCCATGCATTCTTaGACCACACAAAAATTTGCT +
Preference number: 4 (lower is better)
Translates to: GGLGVIPKSWALWPLALPQAMHS*TTQKFA
Trigger: AGCAAATTTTTGTGTGGTGCAAGAATGCATGGCCTG...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCCCATTACCACCCAGCTaGAACTCAGATGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: CPGVLRFLSAADTHRTEAPLPPS*NSDAKG
Trigger: GCCTTTGGCATCTGAGTTGCAGCTGGGTGGTAATGG...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCAATGCCACGTTTCCTTaGTCAGGGCCCTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: CPGVLRFLSAADTHRTEANATFP*SGPCHQ
Trigger: CTGATGACAGGGCCCTGAGCAAGGAAACGTGGCATT...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAACCACTCTTGCACTTGTaGTTTCATTTTGAAAACCGG +
Preference number: 4 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQPLLHL*FHFENR
Trigger: CCGGTTTTCAAAATGAAAGCACAAGTGCAAGAGTGG...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp TTCAATTTCAATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTACTCTGGCTGGGGGTTaGGATGCTCCACCCACTGGG +
Preference number: 4 (lower is better)
Translates to: FNFNAPFAKSRLMPVGSGTLAGG*DAPPTG
Trigger: CCCAGTGGGTGGAGCATCGCAACCCCCAGCCAGAGT...ACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCATTGAAATTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGTTCTATAAGCTCAGTTaGACATATCAGGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRFYKLS*TYQGFH
Trigger: GTGGAAACCCTGATATGTGCAACTGAGCTTATAGAA...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGAACCTAGGCCTGCCTTaGCAGGGATCCACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGNLGLP*QGSTGP
Trigger: GGGCCCTGTGGATCCCTGGCAAGGCAGGCCTAGGTT...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674441.1
CDS-3UTR CCA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGTGTGCCCGGCGCGACTaGCTAGGTACCGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGCARRD*LGTGSE
Trigger: CTCAGAACCGGTACCTAGCCAGTCGCGCCGGGCACA...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCTATCTCCTCGTACTTTaGGGGTGGGTCACTGTAAGA +
Preference number: 4 (lower is better)
Translates to: SEPNITGLKQPPVTLPTAYLLVL*GWVTVR
Trigger: TCTTACAGTGACCCACCCCCAAAGTACGAGGAGATA...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGGGGCACTTTGGCCTTTaGCTCTTCCCGGGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGGHFGL*LFPGAS
Trigger: CGAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCC...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCAGGATGTTGGAGGCTTaGGGGTCATCCCAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: QVETQHQRHMRASAKTAPRMLEA*GSSQRV
Trigger: AACTCTTTGGGATGACCCCCAAGCCTCCAACATCCT...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTGAAATCACAGAACTGTaGAGGGTAAGGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPEITEL*RVRGAE
Trigger: TTCAGCACCCCTTACCCTCCACAGTTCTGTGATTTC...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCGGAAGTAGGGGGAGGTaGTATCAACAGTGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: QVETQHQRHMRASAKTAPGSRGR*YQQCLA
Trigger: TGCTAGACACTGTTGATACCACCTCCCCCTACTTCC...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGATTTTAAATTGCTGTaGTTGCCAATAGACGCAGGC +
Preference number: 4 (lower is better)
Translates to: GGLGVIPKSWALWPLALPDFKLL*LPIDAG
Trigger: GCCTGCGTCTATTGGCAACCACAGCAATTTAAAATC...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGCACAAGCCTTCTAACTaGAAGCACGTCCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELHKPSN*KHVPGQ
Trigger: TTGCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTG...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTAGGAATTCACATTCATaGCAGTGGGATTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVRNSHS*QWDWKL
Trigger: CAACTTCCAATCCCACTGCCATGAATGTGAATTCCT...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGATCGATGAGGGGAGATaGATTGAGAGGCAAAAGCAG +
Preference number: 4 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLIDEGR*IERQKQ
Trigger: CTGCTTTTGCCTCTCAATCCATCTCCCCTCATCGAT...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTTTCTGCAGCTGGCACCTCCAGATGATGAACAAGGCGATGACAATCAGCAGTGAACCAGCCCCAGGGTaGTACATGCCGTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: AFCSWHLQMMNKAMTISSEPAPG*YMPFSL
Trigger: AAGAGAAAACGGCATGTACCACCCTGGGGCTGGTTC...ACTGCTGATTGTCATCGCCTTGTTCATCATCTGGAGGTGCCAGCTGCAGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR TCA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACGAGGGTAAGGGGTGCTaGAAGGCTGGCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHEGKGC*KAGFLP
Trigger: GGGAAGGAAGCCAGCCTTTCAGCACCCCTTACCCTC...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACCCTGTCCTCAGCCCCTaGAGGACACATGTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHPVLSP*RTHVAL
Trigger: GAGGGCAACATGTGTCCTTCAGGGGCTGAGGACAGG...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGATTTTCTCGAAGTTCTaGAGTAGTGGGCTTCAAATT +
Preference number: 4 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGIFSKF*SSGLQI
Trigger: AATTTGAAGCCCACTACTTCAGAACTTCGAGAAAAT...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGATGGAGCGGCCAGTCTaGCAGCGAAGCATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RAGTVQQSDISTVKQLLRMERPV*QRSICF
Trigger: AAAGCAGATGCTTCGCTGTCAGACTGGCCGCTCCAT...CCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTACAGATTTCCCAGCTaGCAAGGGTCAACACATGAA +
Preference number: 4 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPYRFPS*QGSTHE
Trigger: TTCATGTGTTGACCCTTGTCAGCTGGGAAATCTGTA...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp CCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGGCCTAATGCTGACATATACTaGATGTACAGATTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGNSSTSQAFAQSASNGPNADIY*MYRFPS
Trigger: GCTGGGAAATCTGTACATTCAGTATATGTCAGCATT...AGGCCCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp GGACAGAGTAGACTGCATTTGGGTACCCTTTCCAGAACTCCATTTTATCTGCTCATGGCATCTGAGCTCTaGGAGGGGTCTCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: GQSRLHLGTLSRTPFYLLMASEL*EGSRTE
Trigger: CTCTGTCCGAGACCCCTCGCAGAGCTCAGATGCCAT...GAGCAGATAAAATGGAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR GCA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGTTCGCTGCCTCTCGGTaGCCAGAAGGCTCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKFAASR*PEGSPW
Trigger: CCAAGGGGAGCCTTCTGGGCACCGAGAGGCAGCGAA...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACCAGGGAGGTAGAGGGTaGTCTCTAGCCGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHQGGRG*SLAGLW
Trigger: CCACAGTCCGGCTAGAGAGCACCCTCTACCTCCCTG...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CATTTTGTTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGTGGAAGAGGAAACTCTaGCACCCAGCCCTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: HFVFAQSLSLSSKCKQGQWKRKL*HPALWP
Trigger: GGGCCAGAGGGCTGGGTGGCAGAGTTTCCTCTTCCA...CTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAACAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAACCATTACCACCCAGCTaGAACTCAGATGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQPLPPS*NSDAKG
Trigger: GCCTTTGGCATCTGAGTTGCAGCTGGGTGGTAATGG...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCCATAAAATCCAAGTGTaGATCGCAAGGAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: SEPNITGLKQPPVTLPTAHKIQV*IARSDA
Trigger: GGCATCACTCCTTGCGATGCACACTTGGATTTTATG...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACCCGAATGGGCATCCTTaGCCTCCAGAAACACTGCCA +
Preference number: 4 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNPNGHP*PPETLP
Trigger: TGGCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGG...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674457.1
CDS-3UTR CCA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCCCTCCAGGAACTCATTaGCACGAGGGAATCGTTTCA +
Preference number: 4 (lower is better)
Translates to: CPGVLRFLSAADTHRTEAPPGTH*HEGIVS
Trigger: TGAAACGATTCCCTCGTGCCAATGAGTTCCTGGAGG...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTAGAGTAGACTGCATTTaGGTACCCTTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPRVDCI*VPFPEL
Trigger: GAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCT...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CATTTTGTTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGCCAGAAGGCTCCCCTTaGCTATGCACAGTACCCCGG +
Preference number: 4 (lower is better)
Translates to: HFVFAQSLSLSSKCKQGQPEGSP*LCTVPR
Trigger: CCGGGGTACTGTGCATAGCCAAGGGGAGCCTTCTGG...CTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAACAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGGGGCACTTTGGCCTTTaGCTCTTCCCGGGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKGHFGL*LFPGAS
Trigger: CGAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCC...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGAGAGCAAACCCCATATaGGCCTTCAACCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RAGTVQQSDISTVKQLLRRANPI*AFNPRP
Trigger: TGGCCTGGGGTTGAAGGCCCATATGGGGTTTGCTCT...CCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCGATTTTAAATTGCTGTaGTTGCCAATAGACGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICDFKLL*LPIDAG
Trigger: GCCTGCGTCTATTGGCAACCACAGCAATTTAAAATC...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGAGGGTGTAGTGGTCCAAGCTGGTaGCCTCACTGGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: VRYQYSETTVEALSLRGCSGPSW*PHWGRD
Trigger: GTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACT...ACACCCTCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGACATGTTGCCCTCCATaGGCCAGGCCTTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGTCCPP*ARPWAS
Trigger: AGAGGCCCAAGGCCTGGCCCATGGAGGGCAACATGT...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGACAACTTTGGGGGTTaGGTGTCCAATATAGTTAAT +
Preference number: 4 (lower is better)
Translates to: GGLGVIPKSWALWPLALPDNFGG*VSNIVN
Trigger: ATTAACTATATTGGACACCCAACCCCCAAAGTTGTC...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGAGGGTGTCTGGACGCAGCTGTGTaGGTGGTGTGTACACGCCAG +
Preference number: 4 (lower is better)
Translates to: VRYQYSETTVEALSLRGCLDAAV*VVCTRQ
Trigger: CTGGCGTGTACACACCACCCACACAGCTGCGTCCAG...ACACCCTCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACCCACGTTTGAATATTTaGAGGCGAATGATGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHPRLNI*RRMMER
Trigger: CCGCTCCATCATTCGCCTCCAAATATTCAAACGTGG...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp GATTTTAAATTGCTGTGGTTGCCAATAGACGCAGGCCATGCATTCTTGCACCACCCGAATGGGCATCCTTaGCCTGCCATGATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: DFKLLWLPIDAGHAFLHHPNGHP*PAMMLP
Trigger: AGGGAGCATCATGGCAGGCCAAGGATGCCCATTCGG...GTGGTGCAAGAATGCATGGCCTGCGTCTATTGGCAACCACAGCAATTTAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674441.1
3UTR CAA 72 bp AGCTCTGCGAGGGGTCTCGGACAGAGTAGACTGCATTaGGGTACCCTTTCCAGAACTCCATTTTATCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSARGLGQSRLH*GTLSRTPFYLL
Trigger: GAGCAGATAAAATGGAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTGTCCGAGACCCCTCGCAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370354.5
3UTR CAA 72 bp AGGACGAGAGGATGGAAAGGGTCAACTGACGGGAGATaGACTCTCCAAGTGGAGACTCAACATCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: RTRGWKGSTDGR*TLQVETQHQRH
Trigger: ATGCCTCTGATGTTGAGTCTCCACTTGGAGAGTCAATCTCCCGTCAGTTGACCCTTTCCATCCTCTCGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CAA 72 bp CACAGTCTGAAAGGAAAAGCTCCCACGTTTGAATATTaGGAGGCGAATGATGGAGCGGCCAGTCTGACAGCG +
Preference number: 4 (lower is better)
Translates to: HSLKGKAPTFEY*EANDGAASLTA
Trigger: CGCTGTCAGACTGGCCGCTCCATCATTCGCCTCCAAATATTCAAACGTGGGAGCTTTTCCTTTCAGACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAAGCTCCTAAAGGCTaGGGCTCCTCCTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: RPVDILATINSMGLFLWHKAPKG*GSSFLA
Trigger: AGCAAGGAAGGAGGAGCCTCAGCCTTTAGGAGCTTT...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS-3UTR TCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAATCTCAAACACTTCCTTaGCCTCCTCGTAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQSQTLP*PPRSCR
Trigger: TCTGCAGCTACGAGGAGGTCAAGGAAGTGTTTGAGA...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATCAGTGGGTAGTGGTTTaGACACAGCTGGTCCACATG +
Preference number: 4 (lower is better)
Translates to: RPVDILATINSMGLFLWHQWVVV*TQLVHM
Trigger: CATGTGGACCAGCTGTGTTCAAACCACTACCCACTG...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGAGAAATCCTCAATCTaGAGTTCAATTTCAATGCAC +
Preference number: 4 (lower is better)
Translates to: GGLGVIPKSWALWPLALPEKSSI*SSISMH
Trigger: GTGCATTGAAATTGAACTTCAGATTGAGGATTTCTC...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTGAGAAATCCTCAATCTaGAGTTCAATTTCAATGCAC +
Preference number: 4 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVEKSSI*SSISMH
Trigger: GTGCATTGAAATTGAACTTCAGATTGAGGATTTCTC...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGCCTGTCCTCAGCCCCTaGAGGACACATGTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKPVLSP*RTHVAL
Trigger: GAGGGCAACATGTGTCCTTCAGGGGCTGAGGACAGG...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCTACAAACACAGAGTTTaGAAAGATATGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: GGLGVIPKSWALWPLALPYKHRV*KDMYRA
Trigger: TGCCCTGTACATATCTTTTCAAACTCTGTGTTTGTA...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCGGAAGCATCCGGCTCTaGCTACTTGACAAAAAGACA +
Preference number: 4 (lower is better)
Translates to: CPGVLRFLSAADTHRTEAGSIRL*LLDKKT
Trigger: TGTCTTTTTGTCAAGTAGTCAGAGCCGGATGCTTCC...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGAATCACAGCTACTGTaGATTGTCTTAAGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQESQLL*IVLSCD
Trigger: ATCACAACTTAAGACAATTCACAGTAGCTGTGATTC...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGATATTTGGAGGCGAATaGTGGAGCGGCCAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: RAGTVQQSDISTVKQLLRIFGGE*WSGQSD
Trigger: GTCAGACTGGCCGCTCCATCATTCGCCTCCAAATAT...CCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000448324.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACATGGCATCTGAGCTCTaGGAGGGGTCTCGGACAGAG +
Preference number: 4 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHMASEL*EGSRTE
Trigger: CTCTGTCCGAGACCCCTCGCAGAGCTCAGATGCCAT...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAACAGGGAGGTAGAGGGTaGTCTCTAGCCGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREQGGRG*SLAGLW
Trigger: CCACAGTCCGGCTAGAGAGCACCCTCTACCTCCCTG...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTTGGCCTCCTCACTGCTaGTCTCTTGGGGCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFWPPHC*SLGAQS
Trigger: TGACTGCGCCCCAAGAGAGCAGCAGTGAGGAGGCCA...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTCAGGCCATGCATTCTTaGACCACACAAAAATTTGCT +
Preference number: 4 (lower is better)
Translates to: DRMLEAWGSSQRVGHFGLQAMHS*TTQKFA
Trigger: AGCAAATTTTTGTGTGGTGCAAGAATGCATGGCCTG...AAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TCCAAAGCCTCACTGAAAACAGACTGGCACCTGGCAACAGCAGAGCAAACCCCAAATAGACGCAGGCCATaGATTCTTGCACCACACAAA +
Preference number: 4 (lower is better)
Translates to: SKASLKTDWHLATAEQTPNRRRP*ILAPHK
Trigger: TTTGTGTGGTGCAAGAATGCATGGCCTGCGTCTATT...TGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCAGCTGCAACTCAGATaGCAAAGGCAGCGGGCATTT +
Preference number: 4 (lower is better)
Translates to: RAGTVQQSDISTVKQLLRQLQLR*QRQRAF
Trigger: AAATGCCCGCTGCCTTTGGCATCTGAGTTGCAGCTG...CCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATGACCAGCAGCTCTGCTaGCAAGATATCCATCTCAGC +
Preference number: 4 (lower is better)
Translates to: RPVDILATINSMGLFLWHDQQLC*QDIHLS
Trigger: GCTGAGATGGATATCTTGGCAGCAGAGCTGCTGGTC...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAACTAGACCAGCAGCTCTaGTGCCAAGATATCCATCTC +
Preference number: 4 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQLDQQL*CQDIHL
Trigger: GAGATGGATATCTTGGCAGCAGAGCTGCTGGTCTAG...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp GGTCGCTTTCTGCAGCTGGCACCTCCAGATGATGAACAAGGCGATGACAATCAGAGAGTAGACTGCATTTaGGTACCCTTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: GRFLQLAPPDDEQGDDNQRVDCI*VPFPEL
Trigger: GAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCT...CTGATTGTCATCGCCTTGTTCATCATCTGGAGGTGCCAGCTGCAGAAAGCGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CCA 90 bp AGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGGTACCACCACATACATaGCATCTGAGCTCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: RAGTVQQSDISTVKQLLRVPPHT*HLSSAR
Trigger: CCTCGCAGAGCTCAGATGCCATGTATGTGGTGGTAC...CCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000448324.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATGTCGCTTTCTGCAGCTaGCACCTCCAGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: RPVDILATINSMGLFLWHVAFCS*HLQMMN
Trigger: GTTCATCATCTGGAGGTGCCAGCTGCAGAAAGCGAC...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACCTCGTACTTTGGGGGTaGGTCACTGTAAGACACGCT +
Preference number: 4 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNLVLWG*VTVRHA
Trigger: AGCGTGTCTTACAGTGACCCACCCCCAAAGTACGAG...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGTATCTCCTCGTACTTTaGGGGTGGGTCACTGTAAGA +
Preference number: 4 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELYLLVL*GWVTVR
Trigger: TCTTACAGTGACCCACCCCCAAAGTACGAGGAGATA...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTTGTCAGCGCCAGGGTTaGCGGCCACTATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFCQRQG*RPLSPR
Trigger: ACGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACA...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCCCAGGCCAGGCCTGTaGACATTCTGGCCACAATCA +
Preference number: 4 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGPRPGL*TFWPQS
Trigger: TGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGG...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGGGGGTGCTGAAAGGCTaGCTTCCTTCCCTTACCCCT +
Preference number: 4 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGGVLKG*LPSLTP
Trigger: AGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCACCCC...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAGGAGGCAAACAGTGACAACTTTGGGGGTTGGGTGTCCAATATAGTTAATGCCCTCCTTCCAGGAGTGTaGGGACAGGTTTTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: KEANSDNFGGWVSNIVNALLPGV*GQVLGE
Trigger: CTCCCCTAAAACCTGTCCCCACACTCCTGGAAGGAG...GGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGAAACAGACTGGCACCTaGCAACAGCAGAGCAAACCC +
Preference number: 4 (lower is better)
Translates to: RAGTVQQSDISTVKQLLRKQTGT*QQQSKP
Trigger: GGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTT...CCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACCAACAGTGTCTAGCATaGTCACTGACAGTTAAAGGG +
Preference number: 4 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHQQCLA*SLTVKG
Trigger: CCCTTTAACTGTCAGTGACCATGCTAGACACTGTTG...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTCCAGAAGTCCTCTGTaGCCTGAAGGCAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: HCSAVRYQYSETTVEALSSRSPL*PEGRAA
Trigger: TGCAGCCCTGCCTTCAGGCCACAGAGGACTTCTGGA...GCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGAGTGGTCCAAGCTGGTaGCCTCACTGGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKSGPSW*PHWGRD
Trigger: GTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACT...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAATGGAGTGGTCCAAGCTaGTGGCCTCACTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREWSGPS*WPHWGR
Trigger: CCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCA...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGAGGGTGTGGGAGGACGAGAGGATaGAAAGGGTCAACTGACGGG +
Preference number: 4 (lower is better)
Translates to: VRYQYSETTVEALSLRGCGRTRG*KGSTDG
Trigger: CCCGTCAGTTGACCCTTTCCATCCTCTCGTCCTCCC...ACACCCTCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACAGATGTGTTCAGGCCTaGGAAATTGGTATCGATGAG +
Preference number: 4 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHRCVQA*EIGIDE
Trigger: CTCATCGATACCAATTTCCCAGGCCTGAACACATCT...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp AGAGTAGACTGCATTTGGGTACCCTTTCCAGAACTCCATTTTATCTGCTCCGTGCCGAATGGGCATCCTTaGCCTCCAGAAACACTGAGG +
Preference number: 4 (lower is better)
Translates to: RVDCIWVPFPELHFICSVPNGHP*PPETLR
Trigger: CCTCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGG...CACGGAGCAGATAAAATGGAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
3UTR CAA 72 bp TTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTTaGAACACAGCTGGTCCACATGTCTGGAGAGACAAG +
Preference number: 4 (lower is better)
Translates to: FAKSRLMPVGSG*NTAGPHVWRDK
Trigger: CTTGTCTCTCCAGACATGTGGACCAGCTGTGTTCAAACCACTACCCACTGGCATGAGCCTACTTTTTGCGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGCCAGAAACACTGCCATaGTGCTCCCTCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKPETLP*CSLSCR
Trigger: CCTGCAGCTGAGGGAGCATCATGGCAGTGTTTCTGG...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AAGGAGGCAAACAGTGACAACTTTGGGGGTTGGGTGTCCAATATAGTTAATGCCTGTCCAAAGCCTCACTaGAAACAGACTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: KEANSDNFGGWVSNIVNACPKPH*KQTGTW
Trigger: CCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGACA...GGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACGAAATGGTTTGGTGTTaGGGTCAGGAGGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNEMVWC*GQEDGD
Trigger: GTCTCCATCCTCCTGACCTCAACACCAAACCATTTC...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGCCCTGCGAGGGGAGGTaGCATTCCTCTTTTCAGACC +
Preference number: 4 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKPCEGR*HSSFQT
Trigger: GGTCTGAAAAGAGGAATGTCACCTCCCCTCGCAGGG...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GATTTTAAATTGCTGTGGTTGCCAATAGACGCAGGCCATGCATTCTTGCACCACCAAGGAGGCAAACAGTaGCAACTTTGGGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: DFKLLWLPIDAGHAFLHHQGGKQ*QLWGLG
Trigger: ACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTTG...GTGGTGCAAGAATGCATGGCCTGCGTCTATTGGCAACCACAGCAATTTAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAACCGGCTCTGACTACTTaGCAAAAAGACACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQPALTT*QKDTFL
Trigger: CAGGAAAGTGTCTTTTTGTCAAGTAGTCAGAGCCGG...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp GACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTGAATCGATGAAGTCCTaGAATGGAGCTTCATTACTT +
Preference number: 4 (lower is better)
Translates to: DRMLEAWGSSQRVGHFGLESMKS*NGASLL
Trigger: AAGTAATGAAGCTCCATTTCAGGACTTCATCGATTC...AAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp CACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCGATGACAATCAGCAGTaGCACCCCCAGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: HCSAVRYQYSETTVEALSDDNQQ*HPQKGY
Trigger: GTACCCCTTCTGGGGGTGGCACTGCTGATTGTCATC...GCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000448324.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CATTTTGTTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGGATGACAATCAGCAGTaGCACCCCCAGAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: HFVFAQSLSLSSKCKQGQDDNQQ*HPQKGY
Trigger: GTACCCCTTCTGGGGGTGGCACTGCTGATTGTCATC...CTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAACAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTGGTACAAATATAGCTaGACACCGGCTATTGTTTCA +
Preference number: 4 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPWYKYS*TPAIVS
Trigger: TGAAACAATAGCCGGTGTGCAGCTATATTTGTACCA...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AAGGAGGCAAACAGTGACAACTTTGGGGGTTGGGTGTCCAATATAGTTAATGCCAATGCCACGTTTCCTTaGTCAGGGCCCTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: KEANSDNFGGWVSNIVNANATFP*SGPCHQ
Trigger: CTGATGACAGGGCCCTGAGCAAGGAAACGTGGCATT...GGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACCCACTCTTGCACTTGTaGTTTCATTTTGAAAACCGG +
Preference number: 4 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHPLLHL*FHFENR
Trigger: CCGGTTTTCAAAATGAAAGCACAAGTGCAAGAGTGG...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATCCTCCAGGAACTCATTaGCACGAGGGAATCGTTTCA +
Preference number: 4 (lower is better)
Translates to: RPVDILATINSMGLFLWHPPGTH*HEGIVS
Trigger: TGAAACGATTCCCTCGTGCCAATGAGTTCCTGGAGG...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CATTTTGTTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGTGGTGCTGGACAGTCTaGAGAGAGAGAGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: HFVFAQSLSLSSKCKQGQWCWTV*RERAQG
Trigger: TCCCTGAGCTCTCTCTCTCCAGACTGTCCAGCACCA...CTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAACAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGTGGTGCTGGACAGTCTaGAGAGAGAGAGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGWCWTV*RERAQG
Trigger: TCCCTGAGCTCTCTCTCTCCAGACTGTCCAGCACCA...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACTGTAAGACACGCTaGCCTCCTCACTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGHCKTR*PPHCCS
Trigger: AGAGCAGCAGTGAGGAGGCCAGCGTGTCTTACAGTG...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGGGAAAGACAGGATGTTaGAGGCTTGGGGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGGKTGC*RLGGHP
Trigger: GGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCC...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TTCAATTTCAATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTGGAAAGACAGGATGTTaGAGGCTTGGGGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: FNFNAPFAKSRLMPVGSGGKTGC*RLGGHP
Trigger: GGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCC...ACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCATTGAAATTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATGGAAGTAGGGGGAGGTaGTATCAACAGTGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: RPVDILATINSMGLFLWHGSRGR*YQQCLA
Trigger: TGCTAGACACTGTTGATACCACCTCCCCCTACTTCC...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCCAAAGCCTCACTGAAAACAGACTGGCACCTGGCAACAGCAGAGCAAACCCCAGATTTTAAATTGCTGTaGTTGCCAATAGACGCAGGC +
Preference number: 4 (lower is better)
Translates to: SKASLKTDWHLATAEQTPDFKLL*LPIDAG
Trigger: GCCTGCGTCTATTGGCAACCACAGCAATTTAAAATC...TGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTTCCAGAAGTCCTCTGTaGCCTGAAGGCAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFSRSPL*PEGRAA
Trigger: TGCAGCCCTGCCTTCAGGCCACAGAGGACTTCTGGA...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAAAGACCGGATCCCTCCTaGTACAAATATAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQRPDPS*YKYSCT
Trigger: TGTGCAGCTATATTTGTACCAGGAGGGATCCGGTCT...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTTTCTTCCTTCTCATaGGATGTCACTGGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHFSSFS*DVTGLS
Trigger: TGACAACCCAGTGACATCCCATGAGAAGGAAGAAAA...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TTCAATTTCAATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTCGTTTCAGGACCGAATaGGCATCCTTGGCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: FNFNAPFAKSRLMPVGSGRFRTE*ASLACH
Trigger: ATGGCAGGCCAAGGATGCCCATTCGGTCCTGAAACG...ACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCATTGAAATTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674441.1
CDS-3UTR TCA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACCAGTGGGTAGTGGTTTaGACACAGCTGGTCCACATG +
Preference number: 4 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHQWVVV*TQLVHM
Trigger: CATGTGGACCAGCTGTGTTCAAACCACTACCCACTG...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCAACTGACGGGAGATTaGCTCTCCAAGTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGQLTGD*LSKWRL
Trigger: GAGTCTCCACTTGGAGAGTCAATCTCCCGTCAGTTG...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGTTAAGCAACCTCCTGTaGCTCTTCCCACGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKLSNLL*LFPRPV
Trigger: GACAGGCCGTGGGAAGAGTCACAGGAGGTTGCTTAA...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTACAAACACAGAGTTTaGAAAGATATGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPYKHRV*KDMYRA
Trigger: TGCCCTGTACATATCTTTTCAAACTCTGTGTTTGTA...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CATTTTGTTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGCAAGGAGGCAAACAGTaGCAACTTTGGGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: HFVFAQSLSLSSKCKQGQQGGKQ*QLWGLG
Trigger: ACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTTG...CTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAACAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACATTTCTTTCAGCTGCTaGCACCCACAGAACAGAAGC +
Preference number: 4 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNISFSC*HPQNRS
Trigger: GCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAAT...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAAAGTGGGATTGGAAGTTaGAAAAGAGGCCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: WTFWPQSTQWGYSFGIRESGIGS*KRGLPG
Trigger: CCCCGGGAGGCCTCTTTTTCAACTTCCAATCCCACT...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp TCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGAGCTGAACTGCAAAGCTaGAGGCACGGTGAAGGGATC +
Preference number: 4 (lower is better)
Translates to: SAVRYQYSETTVEALSLRAELQS*RHGEGI
Trigger: GATCCCTTCACCGTGCCTTCAGCTTTGCAGTTCAGC...TCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGAATAACGGAGTAGAGTaGAAGGCTGCAATATCCAAC +
Preference number: 4 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELNNGVE*KAAISN
Trigger: GTTGGATATTGCAGCCTTTCACTCTACTCCGTTATT...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCGATTTGTCCCAATCCTaGAGATCTGTGTTAATGCTC +
Preference number: 4 (lower is better)
Translates to: CPGVLRFLSAADTHRTEADLSQS*RSVLML
Trigger: GAGCATTAACACAGATCTTCAGGATTGGGACAAATC...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp GACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTACAAGGGTCAACACATaGATACAAGCACAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: DRMLEAWGSSQRVGHFGLTRVNT*IQAQFK
Trigger: TTTAAACTGTGCTTGTATTCATGTGTTGACCCTTGT...AAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACAATGCTGACATATACTaGATGTACAGATTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHNADIY*MYRFPS
Trigger: GCTGGGAAATCTGTACATTCAGTATATGTCAGCATT...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTGGCCTCCAGAAACACTaGCATGATGCTCCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFGLQKH*HDAPSA
Trigger: AGCTGAGGGAGCATCATGGCAGTGTTTCTGGAGGCC...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674457.1
CDS-3UTR GCA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGTGCAGATCTCCTCCATaGACTCTCGCTCGATGGTGC +
Preference number: 4 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKCRSPP*TLARWC
Trigger: GCACCATCGAGCGAGAGTGCATGGAGGAGATCTGCA...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGACACTTCGCAGGCATTTaGTCAGTCAGCCTCCAACGG +
Preference number: 4 (lower is better)
Translates to: SAVRYQYSETTVEALSLRHFAGI*SVSLQR
Trigger: CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTG...TCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp CACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCCGAGAAGTGCTGAACTaGAAAGCTGAAGGCACGGTG +
Preference number: 4 (lower is better)
Translates to: HCSAVRYQYSETTVEALSREVLN*KAEGTV
Trigger: CACCGTGCCTTCAGCTTTGCAGTTCAGCACTTCTCG...GCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGACCATGCAGCCACCCATaGCTTCCGCTGCTTCTCATT +
Preference number: 4 (lower is better)
Translates to: SAVRYQYSETTVEALSLRPCSHP*LPLLLI
Trigger: AATGAGAAGCAGCGGAAGCCATGGGTGGCTGCATGG...TCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS-3UTR CCA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTCCGAATGGGCATCCTTaGCCTCCAGAAACACTGCCA +
Preference number: 4 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFPNGHP*PPETLP
Trigger: TGGCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGG...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674457.1
CDS-3UTR CCA 90 bp CAGAGTAGACTGCATTTGGGTACCCTTTCCAGAACTCCATTTTATCTGCTCCGTCCTCCAGGAACTCATTaGCACGAGGGAATCGTTTCA +
Preference number: 4 (lower is better)
Translates to: QSRLHLGTLSRTPFYLLRPPGTH*HEGIVS
Trigger: TGAAACGATTCCCTCGTGCCAATGAGTTCCTGGAGG...ACGGAGCAGATAAAATGGAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CCA 90 bp CATTTTGTTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGGTACCACCACATACATaGCATCTGAGCTCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: HFVFAQSLSLSSKCKQGQVPPHT*HLSSAR
Trigger: CCTCGCAGAGCTCAGATGCCATGTATGTGGTGGTAC...CTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAACAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCGTCGCTTTCTGCAGCTaGCACCTCCAGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: HCSAVRYQYSETTVEALSVAFCS*HLQMMN
Trigger: GTTCATCATCTGGAGGTGCCAGCTGCAGAAAGCGAC...GCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000448324.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTCACTGTAAGACACGCTaGCCTCCTCACTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFHCKTR*PPHCCS
Trigger: AGAGCAGCAGTGAGGAGGCCAGCGTGTCTTACAGTG...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTTTCCACTGTCACAAATTCACAATGTCAGAGCAAAATAACAGATGTGTTCAGGTGTCAGCGCCAGGGTTaGCGGCCACTATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: VSTVTNSQCQSKITDVFRCQRQG*RPLSPR
Trigger: ACGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACA...CCTGAACACATCTGTTATTTTGCTCTGACATTGTGAATTTGTGACAGTGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACTCCACGTGGGCCCCTTaGTCAATGTGGAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHSTWAP*SMWKRK
Trigger: TTTCCTCTTCCACATTGACCAAGGGGCCCACGTGGA...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTAGAGCAAACCCCATATaGGCCTTCAACCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFRANPI*AFNPRP
Trigger: TGGCCTGGGGTTGAAGGCCCATATGGGGTTTGCTCT...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACGCAGCGGGCATTTCTTaGCAAACTCCCTTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHAAGIS*QTPFGS
Trigger: AGAGCCAAAGGGAGTTTGCCAAGAAATGCCCGCTGC...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCCAAAGCCTCACTGAAAACAGACTGGCACCTGGCAACAGCAGAGCAAACCCCAGACAACTTTGGGGGTTaGGTGTCCAATATAGTTAAT +
Preference number: 4 (lower is better)
Translates to: SKASLKTDWHLATAEQTPDNFGG*VSNIVN
Trigger: ATTAACTATATTGGACACCCAACCCCCAAAGTTGTC...TGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCTCACATTCATGGCAGTaGGATTGGAAGTTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPSHSWQ*DWKLKK
Trigger: CTTTTTCAACTTCCAATCCCACTGCCATGAATGTGA...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp CCACTCTTGCACTTGTGCTTTCATTTTGAAAACCGGAGGCGATGGGAAGCGGGGTCACATTCATGGCAGTaGGATTGGAAGTTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: PLLHLCFHFENRRRWEAGSHSWQ*DWKLKK
Trigger: CTTTTTCAACTTCCAATCCCACTGCCATGAATGTGA...CCCCGCTTCCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAGTGCAAGAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGAAAGATCAACTCTGGCTaGGGGTTGCGATGCTCCACC +
Preference number: 4 (lower is better)
Translates to: SAVRYQYSETTVEALSLRKINSG*GLRCST
Trigger: GGTGGAGCATCGCAACCCCCAGCCAGAGTTGATCTT...TCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp AGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCCACGTTTGAATATTTaGAGGCGAATGATGGAGCGG +
Preference number: 4 (lower is better)
Translates to: RAGTVQQSDISTVKQLLRPRLNI*RRMMER
Trigger: CCGCTCCATCATTCGCCTCCAAATATTCAAACGTGG...CCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000448324.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGACTGCATTTGGGTACCCTTTCCAGAACTCCATTTTATCTGCTCCGTGATGGCTTCCTTGCTTCTGATTaGTCTGCATTACCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RLHLGTLSRTPFYLLRDGFLASD*SALPGP
Trigger: AGGCCCTGGTAATGCAGACCAATCAGAAGCAAGGAA...GCCATCACGGAGCAGATAAAATGGAGTTCTGGAAAGGGTACCCAAATGCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CCA 90 bp CAGAGTAGACTGCATTTGGGTACCCTTTCCAGAACTCCATTTTATCTGCTCCGTGGCTATGCCTTAGGCTaGGTGTCTTTCCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QSRLHLGTLSRTPFYLLRGYALG*VSFLAS
Trigger: AGAAGCAAGGAAAGACACCCAGCCTAAGGCATAGCC...ACGGAGCAGATAAAATGGAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR TCA 90 bp TCCAAAGCCTCACTGAAAACAGACTGGCACCTGGCAACAGCAGAGCAAACCCCAGAGAAATCCTCAATCTaGAGTTCAATTTCAATGCAC +
Preference number: 4 (lower is better)
Translates to: SKASLKTDWHLATAEQTPEKSSI*SSISMH
Trigger: GTGCATTGAAATTGAACTTCAGATTGAGGATTTCTC...TGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTTTCAGTGAGGCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGAGGGTGTGAAATGGTTTGGTGTTaGGGTCAGGAGGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: VRYQYSETTVEALSLRGCEMVWC*GQEDGD
Trigger: GTCTCCATCCTCCTGACCTCAACACCAAACCATTTC...ACACCCTCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGAACATCAGAGGCATATaGGGGCCTCAGCTAAGACTG +
Preference number: 4 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGNIRGI*GPQLRL
Trigger: CAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTT...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAACAACTGACGGGAGATTaGCTCTCCAAGTGGAGACTC +
Preference number: 4 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREQLTGD*LSKWRL
Trigger: GAGTCTCCACTTGGAGAGTCAATCTCCCGTCAGTTG...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp AAGGAGGCAAACAGTGACAACTTTGGGGGTTGGGTGTCCAATATAGTTAATGCCATTTCTTTCAGCTGCTaGCACCCACAGAACAGAAGC +
Preference number: 4 (lower is better)
Translates to: KEANSDNFGGWVSNIVNAISFSC*HPQNRS
Trigger: GCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAAT...GGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp GTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGAGGGTGTAAGTTTCTTCTCACCTaGTCCCAGGTCACACTCTGG +
Preference number: 4 (lower is better)
Translates to: VRYQYSETTVEALSLRGCKFLLT*SQVTLW
Trigger: CCAGAGTGTGACCTGGGAGCAGGTGAGAAGAAACTT...ACACCCTCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp GATTTTAAATTGCTGTGGTTGCCAATAGACGCAGGCCATGCATTCTTGCACCACCCTGCAGAATGGAGCTaGTTTGTCTTCTTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: DFKLLWLPIDAGHAFLHHPAEWS*FVFFQS
Trigger: GCTTTGGAAGAAGACAAAGCAGCTCCATTCTGCAGG...GTGGTGCAAGAATGCATGGCCTGCGTCTATTGGCAACCACAGCAATTTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAAGTCGCTTTCTGCAGCTaGCACCTCCAGATGATGAAC +
Preference number: 4 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREVAFCS*HLQMMN
Trigger: GTTCATCATCTGGAGGTGCCAGCTGCAGAAAGCGAC...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGCCACAATCAACTCAATaGGGTTATTCCTTTGGCATA +
Preference number: 4 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELPQSTQ*GYSFGI
Trigger: TATGCCAAAGGAATAACCCCATTGAGTTGATTGTGG...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TTCAATTTCAATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTGTGATAAATTTCCCTTaGCCTCCTATGAACGGCCCG +
Preference number: 4 (lower is better)
Translates to: FNFNAPFAKSRLMPVGSGVINFP*PPMNGP
Trigger: CGGGCCGTTCATAGGAGGCCAAGGGAAATTTATCAC...ACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCATTGAAATTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGAGGGTGTGCTGGTCCACATGTCTaGAGAGACAAGCACACTAGA +
Preference number: 4 (lower is better)
Translates to: VRYQYSETTVEALSLRGCAGPHV*RDKHTR
Trigger: TCTAGTGTGCTTGTCTCTCCAGACATGTGGACCAGC...ACACCCTCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAAAAACAGACTGGCACCTaGCAACAGCAGAGCAAACCC +
Preference number: 4 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREKQTGT*QQQSKP
Trigger: GGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCTGTTT...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCGGAAGTAGGGGGAGGTaGTATCAACAGTGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: HCSAVRYQYSETTVEALSGSRGR*YQQCLA
Trigger: TGCTAGACACTGTTGATACCACCTCCCCCTACTTCC...GCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAAGCAGCGGGCATTTCTTaGCAAACTCCCTTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREAAGIS*QTPFGS
Trigger: AGAGCCAAAGGGAGTTTGCCAAGAAATGCCCGCTGC...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCGACAACTTTGGGGGTTaGGTGTCCAATATAGTTAAT +
Preference number: 4 (lower is better)
Translates to: CPGVLRFLSAADTHRTEADNFGG*VSNIVN
Trigger: ATTAACTATATTGGACACCCAACCCCCAAAGTTGTC...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp AGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGTCATGGCAGTGGGATTaGAAGTTGAAAAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RAGTVQQSDISTVKQLLRSWQWD*KLKKRP
Trigger: AGGCCTCTTTTTCAACTTCCAATCCCACTGCCATGA...CCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAACTCATGGGATGTCACTaGGTTGTCAAAAGATCAACT +
Preference number: 4 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQLMGCH*VVKRST
Trigger: AGTTGATCTTTTGACAACCCAGTGACATCCCATGAG...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CAA 72 bp AAGCTTGTCAGCTCAGTGGATTTTAAATTGCTGTGGTaGCCAATAGACGCAGGCCATGCATTCTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: KLVSSVDFKLLW*PIDAGHAFLHH
Trigger: GTGGTGCAAGAATGCATGGCCTGCGTCTATTGGCAACCACAGCAATTTAAAATCCACTGAGCTGACAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAATCTCAAACACTTCCTTaGCCTCCTCGTAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: WTFWPQSTQWGYSFGIRESQTLP*PPRSCR
Trigger: TCTGCAGCTACGAGGAGGTCAAGGAAGTGTTTGAGA...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp CATTTTGTTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGCCGGCTCTGACTACTTaGCAAAAAGACACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: HFVFAQSLSLSSKCKQGQPALTT*QKDTFL
Trigger: CAGGAAAGTGTCTTTTTGTCAAGTAGTCAGAGCCGG...CTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAACAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AAGGAGGCAAACAGTGACAACTTTGGGGGTTGGGTGTCCAATATAGTTAATGCCGAGAGACTCTCTCCATaGTCTCTCTCTTGGACAAAA +
Preference number: 4 (lower is better)
Translates to: KEANSDNFGGWVSNIVNAERLSP*SLSWTK
Trigger: TTTTGTCCAAGAGAGAGATCATGGAGAGAGTCTCTC...GGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp CATTTTGTTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGACATACGAGAAGTGCTaGACTGCAAAGCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HFVFAQSLSLSSKCKQGQTYEKC*TAKLKA
Trigger: TGCCTTCAGCTTTGCAGTTCAGCACTTCTCGTATGT...CTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAACAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGTGGAAGAGGAAACTCTaGCACCCAGCCCTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLWKRKL*HPALWP
Trigger: GGGCCAGAGGGCTGGGTGGCAGAGTTTCCTCTTCCA...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGGCAAGGAGTGATGCCTaGTGTGTGCTGTACAGTCTT +
Preference number: 4 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKARSDA*CVLYSL
Trigger: AAGACTGTACAGCACACAGCAGGCATCACTCCTTGC...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTGCAAGGAGTGATGCCTaGTGTGTGCTGTACAGTCTT +
Preference number: 4 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFARSDA*CVLYSL
Trigger: AAGACTGTACAGCACACAGCAGGCATCACTCCTTGC...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAGTAGAGTGAAAGGCTaGAATATCCAACATCCCTGT +
Preference number: 4 (lower is better)
Translates to: RPVDILATINSMGLFLWHSRVKG*NIQHPC
Trigger: ACAGGGATGTTGGATATTGCAGCCTTTCACTCTACT...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGCAAGTTTGTCTGTTaGCCCCAGGCTCCAATGAAA +
Preference number: 4 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHSKFVC*PQAPMK
Trigger: TTTCATTGGAGCCTGGGGGCAACAGACAAACTTGCT...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp GATTTTAAATTGCTGTGGTTGCCAATAGACGCAGGCCATGCATTCTTGCACCACAGAGTAGACTGCATTTaGGTACCCTTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: DFKLLWLPIDAGHAFLHHRVDCI*VPFPEL
Trigger: GAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCT...GTGGTGCAAGAATGCATGGCCTGCGTCTATTGGCAACCACAGCAATTTAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TTCAATTTCAATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTGAAATCACAGAACTGTaGAGGGTAAGGGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FNFNAPFAKSRLMPVGSGEITEL*RVRGAE
Trigger: TTCAGCACCCCTTACCCTCCACAGTTCTGTGATTTC...ACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCATTGAAATTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGGCTGGTCCACATGTCTaGAGAGACAAGCACACTAGA +
Preference number: 4 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKAGPHV*RDKHTR
Trigger: TCTAGTGTGCTTGTCTCTCCAGACATGTGGACCAGC...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACTGGTTTGAACACAGCTaGTCCACATGTCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHWFEHS*STCLER
Trigger: TCTCTCCAGACATGTGGACCAGCTGTGTTCAAACCA...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACAGGAATTCACATTCATaGCAGTGGGATTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNRNSHS*QWDWKL
Trigger: CAACTTCCAATCCCACTGCCATGAATGTGAATTCCT...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACCTCATGGGATGTCACTaGGTTGTCAAAAGATCAACT +
Preference number: 4 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNLMGCH*VVKRST
Trigger: AGTTGATCTTTTGACAACCCAGTGACATCCCATGAG...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
3UTR CAA 72 bp CAGAGCAAAATAACAGATGTGTTCAGGCCTGGGAAATaGGTATCGATGAGGGGAGATGGATTGAGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: QSKITDVFRPGK*VSMRGDGLRGK
Trigger: TTTGCCTCTCAATCCATCTCCCCTCATCGATACCAATTTCCCAGGCCTGAACACATCTGTTATTTTGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp TTCAATTTCAATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTCTGCATTCAAGGAAATaGGTCCCAATGTCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: FNFNAPFAKSRLMPVGSGLHSRK*VPMSAL
Trigger: TAAGGCAGACATTGGGACTCATTTCCTTGAATGCAG...ACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCATTGAAATTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAAGACACTTTCCTGTCCTaGATTCCTCATATTCGGGCT +
Preference number: 4 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREDTFLS*IPHIRA
Trigger: AGCCCGAATATGAGGAATTCAGGACAGGAAAGTGTC...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGAAGACAGAGCCTCCGTaGGCGAGAGAGACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLKTEPP*ARETLS
Trigger: GGAGAGAGTCTCTCTCGCTCACGGAGGCTCTGTCTT...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACGAATCGATGAAGTCCTaGAATGGAGCTTCATTACTT +
Preference number: 4 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNESMKS*NGASLL
Trigger: AAGTAATGAAGCTCCATTTCAGGACTTCATCGATTC...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGGCTCCAATGAAATGCTaGCATATACTGAATGTACAG +
Preference number: 4 (lower is better)
Translates to: RAGTVQQSDISTVKQLLRAPMKC*HILNVQ
Trigger: CTGTACATTCAGTATATGTCAGCATTTCATTGGAGC...CCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp AAGGAGGCAAACAGTGACAACTTTGGGGGTTGGGTGTCCAATATAGTTAATGCCAGTAGAGTGAAAGGCTaGAATATCCAACATCCCTGT +
Preference number: 4 (lower is better)
Translates to: KEANSDNFGGWVSNIVNASRVKG*NIQHPC
Trigger: ACAGGGATGTTGGATATTGCAGCCTTTCACTCTACT...GGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp GTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGAGGGTGTGAGCTTGAGAGGGTGTaGTATTTGGGTATGTTTGTC +
Preference number: 4 (lower is better)
Translates to: VRYQYSETTVEALSLRGCELERV*YLGMFV
Trigger: GACAAACATACCCAAATAGCACACCCTCTCAAGCTC...ACACCCTCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000448324.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACCCACAATCAACTCAATaGGGTTATTCCTTTGGCATA +
Preference number: 4 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNPQSTQ*GYSFGI
Trigger: TATGCCAAAGGAATAACCCCATTGAGTTGATTGTGG...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTTTCCACTGTCACAAATTCACAATGTCAGAGCAAAATAACAGATGTGTTCAGGGCCCCTTGGTCAATGTaGAAGAGGAAACTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VSTVTNSQCQSKITDVFRAPWSM*KRKLCH
Trigger: GTGGCAGAGTTTCCTCTTCCACATTGACCAAGGGGC...CCTGAACACATCTGTTATTTTGCTCTGACATTGTGAATTTGTGACAGTGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGATGGCAGAGTCCACGTaGGCCCCTTGGTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLMAEST*APWSMW
Trigger: CCACATTGACCAAGGGGCCCACGTGGACTCTGCCAT...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGATGGTTTGAACACAGCTaGTCCACATGTCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SAVRYQYSETTVEALSLRWFEHS*STCLER
Trigger: TCTCTCCAGACATGTGGACCAGCTGTGTTCAAACCA...TCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp TTCAATTTCAATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTCAACAGTGTCTAGCATaGTCACTGACAGTTAAAGGG +
Preference number: 4 (lower is better)
Translates to: FNFNAPFAKSRLMPVGSGQQCLA*SLTVKG
Trigger: CCCTTTAACTGTCAGTGACCATGCTAGACACTGTTG...ACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCATTGAAATTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GTTTCCACTGTCACAAATTCACAATGTCAGAGCAAAATAACAGATGTGTTCAGGCACAAGCCTTCTAACTaGAAGCACGTCCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: VSTVTNSQCQSKITDVFRHKPSN*KHVPGQ
Trigger: TTGCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTG...CCTGAACACATCTGTTATTTTGCTCTGACATTGTGAATTTGTGACAGTGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGGGGGGTTGCATAGGGTaGAGACCTGCAGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLGGCIG*RPAEWS
Trigger: GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCC...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGCCACGTTTGAATATTTaGAGGCGAATGATGGAGCGG +
Preference number: 4 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKPRLNI*RRMMER
Trigger: CCGCTCCATCATTCGCCTCCAAATATTCAAACGTGG...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp CATTTTGTTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAGATGTGTTCAGGCCTaGGAAATTGGTATCGATGAG +
Preference number: 4 (lower is better)
Translates to: HFVFAQSLSLSSKCKQGQRCVQA*EIGIDE
Trigger: CTCATCGATACCAATTTCCCAGGCCTGAACACATCT...CTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAACAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGGTGCATCGCAAGGAGTaGTGCCTGCTGTGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLVHRKE*CLLCAV
Trigger: TACAGCACACAGCAGGCATCACTCCTTGCGATGCAC...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp TCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGAGAGAGACTCTCTCCATaGTCTCTCTCTTGGACAAAA +
Preference number: 4 (lower is better)
Translates to: SAVRYQYSETTVEALSLRERLSP*SLSWTK
Trigger: TTTTGTCCAAGAGAGAGATCATGGAGAGAGTCTCTC...TCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp TCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGATATCCAACATCCCTGTaGTGGAGAGAGAACAAGAGA +
Preference number: 4 (lower is better)
Translates to: SAVRYQYSETTVEALSLRYPTSL*WRENKR
Trigger: TCTCTTGTTCTCTCTCCATCACAGGGATGTTGGATA...TCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp TTCAATTTCAATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTGATTTGTCCCAATCCTaGAGATCTGTGTTAATGCTC +
Preference number: 4 (lower is better)
Translates to: FNFNAPFAKSRLMPVGSGDLSQS*RSVLML
Trigger: GAGCATTAACACAGATCTTCAGGATTGGGACAAATC...ACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCATTGAAATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATACAAGGGTCAACACATaGATACAAGCACAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: RPVDILATINSMGLFLWHTRVNT*IQAQFK
Trigger: TTTAAACTGTGCTTGTATTCATGTGTTGACCCTTGT...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTTACAGATTTCCCAGCTaGCAAGGGTCAACACATGAA +
Preference number: 4 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFYRFPS*QGSTHE
Trigger: TTCATGTGTTGACCCTTGTCAGCTGGGAAATCTGTA...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp GATTTTAAATTGCTGTGGTTGCCAATAGACGCAGGCCATGCATTCTTGCACCACGCTCCAATGAAATGCTaGCATATACTGAATGTACAG +
Preference number: 4 (lower is better)
Translates to: DFKLLWLPIDAGHAFLHHAPMKC*HILNVQ
Trigger: CTGTACATTCAGTATATGTCAGCATTTCATTGGAGC...GTGGTGCAAGAATGCATGGCCTGCGTCTATTGGCAACCACAGCAATTTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGCAGTTAAAGGGCAGGTaGCTTCTGCCCCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLQLKGR*LLPHCC
Trigger: ACAGCAGTGGGGCAGAAGGCACCTGCCCTTTAACTG...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGAATAGACGCAGGCCATaGATTCTTGCACCACACAAA +
Preference number: 4 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKNRRRP*ILAPHK
Trigger: TTTGTGTGGTGCAAGAATGCATGGCCTGCGTCTATT...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAAAGAGTAGACTGCATTTaGGTACCCTTTCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: WTFWPQSTQWGYSFGIRERVDCI*VPFPEL
Trigger: GAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCT...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp GATTTTAAATTGCTGTGGTTGCCAATAGACGCAGGCCATGCATTCTTGCACCACCCACAATCAACTCAATaGGGTTATTCCTTTGGCATA +
Preference number: 4 (lower is better)
Translates to: DFKLLWLPIDAGHAFLHHPQSTQ*GYSFGI
Trigger: TATGCCAAAGGAATAACCCCATTGAGTTGATTGTGG...GTGGTGCAAGAATGCATGGCCTGCGTCTATTGGCAACCACAGCAATTTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR TCA 90 bp GTTTCCACTGTCACAAATTCACAATGTCAGAGCAAAATAACAGATGTGTTCAGGCTTGTGCTTTCATTTTaGAAACCGGAGGCGATGGGA +
Preference number: 4 (lower is better)
Translates to: VSTVTNSQCQSKITDVFRLVLSF*KPEAMG
Trigger: TCCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAG...CCTGAACACATCTGTTATTTTGCTCTGACATTGTGAATTTGTGACAGTGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp CACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTACACAAAAGACCCTaGACATTGACTAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: HCSAVRYQYSETTVEALSLHKRP*TLTKGK
Trigger: CTTCCCTTTAGTCAATGTTCAGGGTCTTTTGTGTAA...GCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp CATTTTGTTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGCCACAATCAACTCAATaGGGTTATTCCTTTGGCATA +
Preference number: 4 (lower is better)
Translates to: HFVFAQSLSLSSKCKQGQPQSTQ*GYSFGI
Trigger: TATGCCAAAGGAATAACCCCATTGAGTTGATTGTGG...CTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAACAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp CATTTTGTTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAGCTTGTCAGCTCAGTaGATTTTAAATTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: HFVFAQSLSLSSKCKQGQSLSAQ*ILNCCG
Trigger: ACCACAGCAATTTAAAATCCACTGAGCTGACAAGCT...CTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAACAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CCA 90 bp TCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGATTTTCTTCCTTCTCATaGGATGTCACTGGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: SAVRYQYSETTVEALSLRFSSFS*DVTGLS
Trigger: TGACAACCCAGTGACATCCCATGAGAAGGAAGAAAA...TCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp CACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTACAAACACAGAGTTTaGAAAGATATGTACAGGGCA +
Preference number: 4 (lower is better)
Translates to: HCSAVRYQYSETTVEALSYKHRV*KDMYRA
Trigger: TGCCCTGTACATATCTTTTCAAACTCTGTGTTTGTA...GCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACATTTTCTCGAAGTTCTaGAGTAGTGGGCTTCAAATT +
Preference number: 4 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHIFSKF*SSGLQI
Trigger: AATTTGAAGCCCACTACTTCAGAACTTCGAGAAAAT...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp CACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCGAATCACAGCTACTGTaGATTGTCTTAAGTTGTGAT +
Preference number: 4 (lower is better)
Translates to: HCSAVRYQYSETTVEALSESQLL*IVLSCD
Trigger: ATCACAACTTAAGACAATTCACAGTAGCTGTGATTC...GCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp GTTTCCACTGTCACAAATTCACAATGTCAGAGCAAAATAACAGATGTGTTCAGGCATAAAATCCAAGTGTaGATCGCAAGGAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: VSTVTNSQCQSKITDVFRHKIQV*IARSDA
Trigger: GGCATCACTCCTTGCGATGCACACTTGGATTTTATG...CCTGAACACATCTGTTATTTTGCTCTGACATTGTGAATTTGTGACAGTGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR GCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAATGGTACAAATATAGCTaGACACCGGCTATTGTTTCA +
Preference number: 4 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREWYKYS*TPAIVS
Trigger: TGAAACAATAGCCGGTGTGCAGCTATATTTGTACCA...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR GCA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAATTCTATAAGCTCAGTTaGACATATCAGGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREFYKLS*TYQGFH
Trigger: GTGGAAACCCTGATATGTGCAACTGAGCTTATAGAA...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR TCA 90 bp GTTTCCACTGTCACAAATTCACAATGTCAGAGCAAAATAACAGATGTGTTCAGGTTACACAAAAGACCCTaGACATTGACTAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VSTVTNSQCQSKITDVFRLHKRP*TLTKGK
Trigger: CTTCCCTTTAGTCAATGTTCAGGGTCTTTTGTGTAA...CCTGAACACATCTGTTATTTTGCTCTGACATTGTGAATTTGTGACAGTGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CCA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGAGCTTGTCAGCTCAGTaGATTTTAAATTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLSLSAQ*ILNCCG
Trigger: ACCACAGCAATTTAAAATCCACTGAGCTGACAAGCT...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
3UTR CAA 72 bp CATTGTATCAAATCCACCTCCATACAAACACAGAGTTaGAAAAGATATGTACAGGGCATTCATAAAATCCAA +
Preference number: 4 (lower is better)
Translates to: HCIKSTSIQTQS*KRYVQGIHKIQ
Trigger: TTGGATTTTATGAATGCCCTGTACATATCTTTTCAAACTCTGTGTTTGTATGGAGGTGGATTTGATACAATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS GCA 90 bp GGTCTCACTTCTCGTTCTCCGGGCCCAGAAGGCGGCCGCCCTGTTTaGGCACGCAGCCCGCCACCTCGCTGCTGCGCCTCTTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GLTSRSPGPEGGRPV*ARSPPPRCCASSSR
Trigger: CCTGCTGGAAGAGGCGCAGCAGCGAGGTGGCGGGCTGCGTGCGCAAACAGGGCGGCCGCCTTCTGGGCCCGGAGAACGAGAAGTGAGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCGCGTGTGAGCGGGGGTaGCATAGGGTGGAGACCTGC +
Preference number: 5 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLACERG*HRVETC
Trigger: GCAGGTCTCCACCCTATGCAACCCCCGCTCACACGC...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTAGGCGGCCGCCCTGTTaGCGCACGCAGCCCGCCACC +
Preference number: 5 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVRRPPC*RTQPAT
Trigger: GGTGGCGGGCTGCGTGCGCAAACAGGGCGGCCGCCT...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGAGGCGGCCGCCCTGTTaGCGCACGCAGCCCGCCACC +
Preference number: 5 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQRRPPC*RTQPAT
Trigger: GGTGGCGGGCTGCGTGCGCAAACAGGGCGGCCGCCT...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCTGGGCACTTTGGCCTTaGGCTCTTCCCGGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTWALWP*ALPGGF
Trigger: GAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCCA...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GGTCGCTTTCTGCAGCTGGCACCTCCAGATGATGAACAAGGCGATGACAATCAGAGGCGGCCGCCCTGTTaGCGCACGCAGCCCGCCACC +
Preference number: 5 (lower is better)
Translates to: GRFLQLAPPDDEQGDDNQRRPPC*RTQPAT
Trigger: GGTGGCGGGCTGCGTGCGCAAACAGGGCGGCCGCCT...CTGATTGTCATCGCCTTGTTCATCATCTGGAGGTGCCAGCTGCAGAAAGCGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CAA 90 bp AAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGTTGTCAGCGCCAGGGTaGGCGGCCACTATCTCCTCG +
Preference number: 5 (lower is better)
Translates to: KAGFLPLPLRPRALDTGRLSAPG*AATISS
Trigger: CGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACAA...CCTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCAGGATGTTGGAGGCTaGGGGGTCATCCCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTQDVGG*GVIPKS
Trigger: ACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCCCTGAAGGACACATGTaGCCCTCCATGGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGPEGHM*PSMGQA
Trigger: GGCCTGGCCCATGGAGGGCAACATGTGTCCTTCAGG...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTGCGTGTGAGCGGGGGTaGCATAGGGTGGAGACCTGC +
Preference number: 5 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVACERG*HRVETC
Trigger: GCAGGTCTCCACCCTATGCAACCCCCGCTCACACGC...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS CCA 90 bp GTCAGCGCCAGGGTTGGCGGCCACTATCTCCTCGTACTTTGGGGGTaGGTCACTGTAAGACACGCTGGCCTCCTCACTGCTGCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: VSARVGGHYLLVLWG*VTVRHAGLLTAALL
Trigger: CAAGAGAGCAGCAGTGAGGAGGCCAGCGTGTCTTACAGTGACCCACCCCCAAAGTACGAGGAGATAGTGGCCGCCAACCCTGGCGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAACCCAGAAGGCTCCCCTaGGCTATGCACAGTACCCCG +
Preference number: 5 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQPRRLP*AMHSTP
Trigger: CGGGGTACTGTGCATAGCCAAGGGGAGCCTTCTGGG...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTCCCAGAAGGCTCCCCTaGGCTATGCACAGTACCCCG +
Preference number: 5 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGPRRLP*AMHSTP
Trigger: CGGGGTACTGTGCATAGCCAAGGGGAGCCTTCTGGG...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GTGCTGAAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACCCCAGAAGGCTCCCCTaGGCTATGCACAGTACCCCG +
Preference number: 5 (lower is better)
Translates to: VLKGWLPSLTPEAQSSRHPRRLP*AMHSTP
Trigger: CGGGGTACTGTGCATAGCCAAGGGGAGCCTTCTGGG...GTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGTTGTCAGCGCCAGGGTaGGCGGCCACTATCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SHSPQARPVDILATINSMLSAPG*AATISS
Trigger: CGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACAA...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATTGTCAGCGCCAGGGTaGGCGGCCACTATCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQLSAPG*AATISS
Trigger: CGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACAA...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCTTGTCAGCGCCAGGGTaGGCGGCCACTATCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GGLGVIPKSWALWPLALPLSAPG*AATISS
Trigger: CGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACAA...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCCAAACGTCCCACTACTaGTCAGCGCCAGGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSQTSHY*SAPGLA
Trigger: CGCCAACCCTGGCGCTGACAAGTAGTGGGACGTTTG...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTGGGCACTTTGGCCTTaGGCTCTTCCCGGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGWALWP*ALPGGF
Trigger: GAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCCA...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS CCA 90 bp CTACTTGTCAGCGCCAGGGTTGGCGGCCACTATCTCCTCGTACTTTaGGGGTGGGTCACTGTAAGACACGCTGGCCTCCTCACTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LLVSARVGGHYLLVL*GWVTVRHAGLLTAA
Trigger: AGCAGCAGTGAGGAGGCCAGCGTGTCTTACAGTGACCCACCCCCAAAGTACGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACAAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATCTCACTGCTGCTCTCTaGGGGCGCAGTCACCTCCTC +
Preference number: 5 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYLTAAL*GRSHLL
Trigger: GAGGAGGTGACTGCGCCCCAAGAGAGCAGCAGTGAG...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCCCTGAAGGACACATGTaGCCCTCCATGGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICPEGHM*PSMGQA
Trigger: GGCCTGGCCCATGGAGGGCAACATGTGTCCTTCAGG...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAAACCGAATGGGCATCCTaGGCCTGCCATGATGCTCCC +
Preference number: 5 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQTEWAS*ACHDAP
Trigger: GGGAGCATCATGGCAGGCCAAGGATGCCCATTCGGT...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674441.1
CDS-3UTR CAA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTCAACCTAGGCCTGCCTaGCCAGGGATCCACAGGGCC +
Preference number: 5 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPQPRPA*PGIHRA
Trigger: GGCCCTGTGGATCCCTGGCAAGGCAGGCCTAGGTTG...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674441.1
CDS-3UTR CAA 90 bp CCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCCTCCAGAGTAGACTGCATTaGGGTACCCTTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: PLALPGGFDSCVVPTPTLQSRLH*GTLSRT
Trigger: AGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTG...GAGGGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCCAGGATGTTGGAGGCTaGGGGGTCATCCCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSQDVGG*GVIPKS
Trigger: ACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CCACTCTTGCACTTGTGCTTTCATTTTGAAAACCGGAGGCGATGGGAAGCGGGGGCGTGTGAGCGGGGGTaGCATAGGGTGGAGACCTGC +
Preference number: 5 (lower is better)
Translates to: PLLHLCFHFENRRRWEAGACERG*HRVETC
Trigger: GCAGGTCTCCACCCTATGCAACCCCCGCTCACACGC...CCCCGCTTCCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAGTGCAAGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGAACTCTGGCTGGGGGTaGCGATGCTCCACCCACTGG +
Preference number: 5 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLNSGWG*RCSTHW
Trigger: CCAGTGGGTGGAGCATCGCAACCCCCAGCCAGAGTT...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATACCGAATGGGCATCCTaGGCCTCCAGAAACACTGCC +
Preference number: 5 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYTEWAS*ASRNTA
Trigger: GGCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGGT...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674457.1
CDS-3UTR CAA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCCTCACTGCTGCTCTCTaGGGGCGCAGTCACCTCCTC +
Preference number: 5 (lower is better)
Translates to: QVETQHQRHMRASAKTAPLTAAL*GRSHLL
Trigger: GAGGAGGTGACTGCGCCCCAAGAGAGCAGCAGTGAG...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCCTATCTCCTCGTACTTaGGGGGTGGGTCACTGTAAG +
Preference number: 5 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGLSPRT*GVGHCK
Trigger: CTTACAGTGACCCACCCCCAAAGTACGAGGAGATAG...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTCAAACGTCCCACTACTaGTCAGCGCCAGGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: DRMLEAWGSSQRVGHFGLQTSHY*SAPGLA
Trigger: CGCCAACCCTGGCGCTGACAAGTAGTGGGACGTTTG...AAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GTGCTGAAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACGGTCATCCCAAAGAGTaGGGCACTTTGGCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: VLKGWLPSLTPEAQSSRHGHPKE*GTLAFG
Trigger: GCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACC...GTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGCAGGATGTTGGAGGCTaGGGGGTCATCCCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQQDVGG*GVIPKS
Trigger: ACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAACAGGATGTTGGAGGCTaGGGGGTCATCCCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQQDVGG*GVIPKS
Trigger: ACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTCAGGATGTTGGAGGCTaGGGGGTCATCCCAAAGAGT +
Preference number: 5 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGQDVGG*GVIPKS
Trigger: ACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp ACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTGGAAAGACAGGATGTaGGAGGCTTGGGGGTCATCC +
Preference number: 5 (lower is better)
Translates to: TAPRPGLWTFWPQSTQWGWKDRM*EAWGSS
Trigger: GGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCA...ACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CCACTCTTGCACTTGTGCTTTCATTTTGAAAACCGGAGGCGATGGGAAGCGGGGCCTGAAGGACACATGTaGCCCTCCATGGGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: PLLHLCFHFENRRRWEAGPEGHM*PSMGQA
Trigger: GGCCTGGCCCATGGAGGGCAACATGTGTCCTTCAGG...CCCCGCTTCCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAGTGCAAGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS TCA 90 bp GAATCGTTTCAGGACCGAATGGGCATCCTTGGCCTCCAGAAACACTaGGGAGAGAGCCCTACTGAGGCCTGCCATGATGCTCCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: ESFQDRMGILGLQKH*GESPTEACHDAPSA
Trigger: AGCTGAGGGAGCATCATGGCAGGCCTCAGTAGGGCTCTCTCCTCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGGTCCTGAAACGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CAA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCTCCTCCAGGAACTCATaGGCACGAGGGAATCGTTTC +
Preference number: 5 (lower is better)
Translates to: GGLGVIPKSWALWPLALPSSRNS*ARGNRF
Trigger: GAAACGATTCCCTCGTGCCAATGAGTTCCTGGAGGA...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GTGCTGAAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACTCCTCCAGGAACTCATaGGCACGAGGGAATCGTTTC +
Preference number: 5 (lower is better)
Translates to: VLKGWLPSLTPEAQSSRHSSRNS*ARGNRF
Trigger: GAAACGATTCCCTCGTGCCAATGAGTTCCTGGAGGA...GTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGCCCAGAAGGCTCCCCTaGGCTATGCACAGTACCCCG +
Preference number: 5 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELPRRLP*AMHSTP
Trigger: CGGGGTACTGTGCATAGCCAAGGGGAGCCTTCTGGG...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTGGAAAGACAGGATGTaGGAGGCTTGGGGGTCATCC +
Preference number: 5 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYWKDRM*EAWGSS
Trigger: GGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCA...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CAGGGTGGAGTGGTCCAAGCTGGTGGCCTCACTGGGGTAGGGACACAAGCCTTCGTTTTTGCTCAGTCCTaGTCCCTGTCCTCCAAATGT +
Preference number: 5 (lower is better)
Translates to: QGGVVQAGGLTGVGTQAFVFAQS*SLSSKC
Trigger: ACATTTGGAGGACAGGGACAAGGACTGAGCAAAAAC...GAAGGCTTGTGTCCCTACCCCAGTGAGGCCACCAGCTTGGACCACTCCACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GTGCTGAAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACCCAGTGGGTAGTGGTTaGAACACAGCTGGTCCACAT +
Preference number: 5 (lower is better)
Translates to: VLKGWLPSLTPEAQSSRHPVGSG*NTAGPH
Trigger: ATGTGGACCAGCTGTGTTCAAACCACTACCCACTGG...GTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCGGCAGCGGGCATTTCTaGGCAAACTCCCTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: SEPNITGLKQPPVTLPTAGSGHF*ANSLWL
Trigger: GAGCCAAAGGGAGTTTGCCAAGAAATGCCCGCTGCC...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGAAATCAGAAGCAAGTTaGTCTGTTGCCCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGKSEAS*SVAPRL
Trigger: GAGCCTGGGGGCAACAGACAAACTTGCTTCTGATTT...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp ATAGGAGGGGTGGTGACGGGTCGCTTTCTGCAGCTGGCACCTCCAGATGATGAAACCGAATGGGCATCCTaGGCCTCCAGAAACACTGAG +
Preference number: 5 (lower is better)
Translates to: IGGVVTGRFLQLAPPDDETEWAS*ASRNTE
Trigger: CTCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGGT...TTCATCATCTGGAGGTGCCAGCTGCAGAAAGCGACCCGTCACCACCCCTCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS CCA 90 bp TCCTCCAGGAACTCATTGGCACGAGGGAATCGTTTCAGGACCGAATaGGCATCCTTGGCCTCCAGAAACACTGCCATGATGCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: SSRNSLARGNRFRTE*ASLASRNTAMMLPQ
Trigger: CTGAGGGAGCATCATGGCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGGTCCTGAAACGATTCCCTCGTGCCAATGAGTTCCTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000448726.5
ENST00000538575.5
ENST00000652529.1
ENST00000674457.1
CDS CCA 90 bp TCCTCCAGGAACTCATTGGCACGAGGGAATCGTTTCAGGACCGAATaGGCATCCTTGGCCTCCAGAAACACTGAGGAGAGAGCCCTACTG +
Preference number: 5 (lower is better)
Translates to: SSRNSLARGNRFRTE*ASLASRNTEERALL
Trigger: CAGTAGGGCTCTCTCCTCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGGTCCTGAAACGATTCCCTCGTGCCAATGAGTTCCTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CAA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCCTCCAGGAACTCATaGGCACGAGGGAATCGTTTC +
Preference number: 5 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICSSRNS*ARGNRF
Trigger: GAAACGATTCCCTCGTGCCAATGAGTTCCTGGAGGA...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAACTCACTGCTGCTCTCTaGGGGCGCAGTCACCTCCTC +
Preference number: 5 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQLTAAL*GRSHLL
Trigger: GAGGAGGTGACTGCGCCCCAAGAGAGCAGCAGTGAG...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGCAAACGTCCCACTACTaGTCAGCGCCAGGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELQTSHY*SAPGLA
Trigger: CGCCAACCCTGGCGCTGACAAGTAGTGGGACGTTTG...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGGTTTTTGCTCAGTCCTaGTCCCTGTCCTCCAAATGT +
Preference number: 5 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGVFAQS*SLSSKC
Trigger: ACATTTGGAGGACAGGGACAAGGACTGAGCAAAAAC...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGTGATAAATTTCCCTaGGCCTCCTATGAACGGCCC +
Preference number: 5 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQCDKFP*ASYERP
Trigger: GGGCCGTTCATAGGAGGCCAAGGGAAATTTATCACA...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTCAGAGGAGAAATGGTTaGGTGTTGAGGTCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVQRRNG*VLRSGG
Trigger: TCCTCCTGACCTCAACACCAAACCATTTCTCCTCTG...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CCAAAAGGGCGTGTGAGCGGGGGTTGCATAGGGTGGAGACCTGCAGAATGGAGCGCAGGCCATGCATTCTaGCACCACACAAAAATTTGC +
Preference number: 5 (lower is better)
Translates to: PKGRVSGGCIGWRPAEWSAGHAF*HHTKIC
Trigger: GCAAATTTTTGTGTGGTGCAAGAATGCATGGCCTGC...GCTCCATTCTGCAGGTCTCCACCCTATGCAACCCCCGCTCACACGCCCTTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACGCACTTCGCAGGCATTaGCTCAGTCAGCCTCCAACG +
Preference number: 5 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHALRRH*LSQPPT
Trigger: CGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGC...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGTCAACTGACGGGAGATaGACTCTCCAAGTGGAGACT +
Preference number: 5 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQSTDGR*TLQVET
Trigger: AGTCTCCACTTGGAGAGTCAATCTCCCGTCAGTTGA...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGGCCTCACTGGGGTAGGGACACAAGCCTTCTAACTGGAAGCACGTCCCAGGGCGCTGCACACCGGCTATaGTTTCAGATAAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: WPHWGRDTSLLTGSTSQGAAHRL*FQISNE
Trigger: CTCATTGCTTATCTGAAACAATAGCCGGTGTGCAGC...GCCCTGGGACGTGCTTCCAGTTAGAAGGCTTGTGTCCCTACCCCAGTGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCACAACTGTTGAGGCATaGAGCTTGAGAGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: GGLGVIPKSWALWPLALPTTVEA*SLRGCA
Trigger: AGCACACCCTCTCAAGCTCAATGCCTCAACAGTTGT...GGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp GCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCTCAGTCAGCCTCCAACGGAAATCAGAAGCAAGTTaGTCTGTTGCCCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: APRQFKHFAGICSVSLQRKSEAS*SVAPRL
Trigger: GAGCCTGGGGGCAACAGACAAACTTGCTTCTGATTT...CCGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCTCCTCCAGGAACTCATaGGCACGAGGGAATCGTTTC +
Preference number: 5 (lower is better)
Translates to: SEPNITGLKQPPVTLPTASSRNS*ARGNRF
Trigger: GAAACGATTCCCTCGTGCCAATGAGTTCCTGGAGGA...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACCTCACTGCTGCTCTCTaGGGGCGCAGTCACCTCCTC +
Preference number: 5 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNLTAAL*GRSHLL
Trigger: GAGGAGGTGACTGCGCCCCAAGAGAGCAGCAGTGAG...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTCTATCTCCTCGTACTTaGGGGGTGGGTCACTGTAAG +
Preference number: 5 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPLSPRT*GVGHCK
Trigger: CTTACAGTGACCCACCCCCAAAGTACGAGGAGATAG...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGCTATCTCCTCGTACTTaGGGGGTGGGTCACTGTAAG +
Preference number: 5 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLLSPRT*GVGHCK
Trigger: CTTACAGTGACCCACCCCCAAAGTACGAGGAGATAG...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACTTGTCAGCGCCAGGGTaGGCGGCCACTATCTCCTCG +
Preference number: 5 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNLSAPG*AATISS
Trigger: CGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACAA...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAAGCAGGCCATGCATTCTaGCACCACACAAAAATTTGC +
Preference number: 5 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQAGHAF*HHTKIC
Trigger: GCAAATTTTTGTGTGGTGCAAGAATGCATGGCCTGC...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGGCCTTTGGCTCTTCCCGGGGGCTTCGACTCATGCGTGGTCCCTACCCCCACCATACAAACACAGAGTTaGAAAAGATATGTACAGGGC +
Preference number: 5 (lower is better)
Translates to: WPLALPGGFDSCVVPTPTIQTQS*KRYVQG
Trigger: GCCCTGTACATATCTTTTCAAACTCTGTGTTTGTAT...GGTGGGGGTAGGGACCACGCATGAGTCGAAGCCCCCGGGAAGAGCCAAAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GTGCTGAAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACACTTGTGCTTTCATTTaGAAAACCGGAGGCGATGGG +
Preference number: 5 (lower is better)
Translates to: VLKGWLPSLTPEAQSSRHTCAFI*KTGGDG
Trigger: CCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAGT...GTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTTCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp AGACTGGCACCTGGCAACAGCAGAGCAAACCCCATATGGGCCTTCAACCCCAGGCTGTGCACCCCACTCTaGCACTTGTGCTTTCATTTT +
Preference number: 5 (lower is better)
Translates to: RLAPGNSRANPIWAFNPRLCTPL*HLCFHF
Trigger: AAAATGAAAGCACAAGTGCAAGAGTGGGGTGCACAG...CCTGGGGTTGAAGGCCCATATGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp GATGACAATCAGCAGTGCCACCCCCAGAAGGGGTACCACCACATACATGGCATCTACCAGGGCCTGTTCTaGCTATTCCTGAGGCTACTC +
Preference number: 5 (lower is better)
Translates to: DDNQQCHPQKGYHHIHGIYQGLF*LFLRLL
Trigger: GAGTAGCCTCAGGAATAGCAAGAACAGGCCCTGGTA...GATGCCATGTATGTGGTGGTACCCCTTCTGGGGGTGGCACTGCTGATTGTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CAA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTCCTCCAGGAACTCATaGGCACGAGGGAATCGTTTC +
Preference number: 5 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHSSRNS*ARGNRF
Trigger: GAAACGATTCCCTCGTGCCAATGAGTTCCTGGAGGA...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TCAGCAGTGCCACCCCCAGAAGGGGTACCACCACATACATGGCATCTGAGCTCTCAGAGTAGACTGCATTaGGGTACCCTTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: SAVPPPEGVPPHTWHLSSQSRLH*GTLSRT
Trigger: AGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTG...AGAGCTCAGATGCCATGTATGTGGTGGTACCCCTTCTGGGGGTGGCACTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CAA 90 bp AGACTGGCACCTGGCAACAGCAGAGCAAACCCCATATGGGCCTTCAACCCCAGGCAGTTAGGGAATTATTaGGCAACAAGGAGGCTAAGG +
Preference number: 5 (lower is better)
Translates to: RLAPGNSRANPIWAFNPRQLGNY*ATRRLR
Trigger: CCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTG...CCTGGGGTTGAAGGCCCATATGGGGTTTGCTCTGCTGTTGCCAGGTGCCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCGGTCATCCCAAAGAGTaGGGCACTTTGGCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: CPGVLRFLSAADTHRTEAGHPKE*GTLAFG
Trigger: GCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACC...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGTGTGATAAATTTCCCTaGGCCTCCTATGAACGGCCC +
Preference number: 5 (lower is better)
Translates to: QDVGGLGVIPKSWALWPLCDKFP*ASYERP
Trigger: GGGCCGTTCATAGGAGGCCAAGGGAAATTTATCACA...CAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTTCGCAGGCATTTGCGCAGGCCATGCATTCTaGCACCACACAAAAATTTGC +
Preference number: 5 (lower is better)
Translates to: LRQTSLAPRQFKHFAGICAGHAF*HHTKIC
Trigger: GCAAATTTTTGTGTGGTGCAAGAATGCATGGCCTGC...GCAAATGCCTGCGAAGTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGACGAAAGAGTCAGCATaGTATCAAATCCACCTCCAT +
Preference number: 5 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGTKESA*YQIHLH
Trigger: ATGGAGGTGGATTTGATACAATGCTGACTCTTTCGT...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AAAGGCTGGCTTCCTTCCCTTACCCCTGAGGCCCAGAGCTCTAGACACAGGCAGGAAAAGCTCCCACGTTaGAATATTTGGAGGCGAATG +
Preference number: 5 (lower is better)
Translates to: KGWLPSLTPEAQSSRHRQEKLPR*NIWRRM
Trigger: CATTCGCCTCCAAATATTCAAACGTGGGAGCTTTTC...CTGCCTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp GTACCGGTTCTGAGCATAGGAGGGGTGGTGACGGGTCGCTTTCTGCAGCTGGCACATGCCGTTTTCTCTTaGTTCTCAAACACTTCCTTG +
Preference number: 5 (lower is better)
Translates to: VPVLSIGGVVTGRFLQLAHAVFS*FSNTSL
Trigger: CAAGGAAGTGTTTGAGAACAAAGAGAAAACGGCATG...TGCCAGCTGCAGAAAGCGACCCGTCACCACCCCTCCTATGCTCAGAACCGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS CCA 90 bp CCATTTTATCTGCTCCGTGATGGCCCTAGTGGCTATGCCTTAGGCTaGGTGTCTTTCCTTGCTTCTGATTGGTCTGCATTACCAGGGCCT +
Preference number: 5 (lower is better)
Translates to: PFYLLRDGPSGYALG*VSFLASDWSALPGP
Trigger: AGGCCCTGGTAATGCAGACCAATCAGAAGCAAGGAAAGACACCCAGCCTAAGGCATAGCCACTAGGGCCATCACGGAGCAGATAAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CAA 90 bp GTTCCTGATGGAAAGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGCTATCTCCTCGTACTTaGGGGGTGGGTCACTGTAAG +
Preference number: 5 (lower is better)
Translates to: VPDGKTGCWRLGGHPKELLSPRT*GVGHCK
Trigger: CTTACAGTGACCCACCCCCAAAGTACGAGGAGATAG...CAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCATCAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATCAGTTAGGGAATTATTaGGCAACAAGGAGGCTAAGG +
Preference number: 5 (lower is better)
Translates to: APRPGLWTFWPQSTQWGYQLGNY*ATRRLR
Trigger: CCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTG...ATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCCAGAGGAGAAATGGTTaGGTGTTGAGGTCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPQRRNG*VLRSGG
Trigger: TCCTCCTGACCTCAACACCAAACCATTTCTCCTCTG...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACTCAACTGACGGGAGATaGACTCTCCAAGTGGAGACT +
Preference number: 5 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHSTDGR*TLQVET
Trigger: AGTCTCCACTTGGAGAGTCAATCTCCCGTCAGTTGA...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTGCTGCACACCGGCTATaGTTTCAGATAAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: DRMLEAWGSSQRVGHFGLAAHRL*FQISNE
Trigger: CTCATTGCTTATCTGAAACAATAGCCGGTGTGCAGC...AAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AGACAGGATGTTGGAGGCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTCAAACAGTGACAACTTaGGGGGTTGGGTGTCCAATA +
Preference number: 5 (lower is better)
Translates to: RQDVGGLGVIPKSWALWPQTVTT*GVGCPI
Trigger: TATTGGACACCCAACCCCCAAAGTTGTCACTGTTTG...AGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGCCTCCAACATCCTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AGTCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATTGTCAGATAAATTCTaGCTAGAGAGAGACTCGCTG +
Preference number: 5 (lower is better)
Translates to: SPTAPRPGLWTFWPQSTQLSDKF*LERDSL
Trigger: CAGCGAGTCTCTCTCTAGCAAGAATTTATCTGACAA...TTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp CATACATGGCATCTGAGCTCTGCGAGGGGTCTCGGACAGAGTAGACTGCATTTGGCTGGGTGTCTTTCCTaGCTTCTGATTGGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: HTWHLSSARGLGQSRLHLAGCLS*LLIGLH
Trigger: ATGCAGACCAATCAGAAGCAAGGAAAGACACCCAGC...CAAATGCAGTCTACTCTGTCCGAGACCCCTCGCAGAGCTCAGATGCCATGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS CCA 90 bp CCTAGTGGCTATGCCTTAGGCTGGGTGTCTTTCCTTGCTTCTGATTaGTCTGCATTACCAGGGCCTGTTCTTGCTATTCCTGAGGCTACT +
Preference number: 5 (lower is better)
Translates to: PSGYALGWVSFLASD*SALPGPVLAIPEAT
Trigger: AGTAGCCTCAGGAATAGCAAGAACAGGCCCTGGTAATGCAGACCAATCAGAAGCAAGGAAAGACACCCAGCCTAAGGCATAGCCACTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CAA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCCAGAGTAGACTGCATTaGGGTACCCTTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: QVETQHQRHMRASAKTAPQSRLH*GTLSRT
Trigger: AGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTG...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACCAGAGTAGACTGCATTaGGGTACCCTTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHQSRLH*GTLSRT
Trigger: AGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTG...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAATGGGCACTTTGGCCTTaGGCTCTTCCCGGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREWALWP*ALPGGF
Trigger: GAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCCA...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGTGGGCACTTTGGCCTTaGGCTCTTCCCGGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKWALWP*ALPGGF
Trigger: GAAGCCCCCGGGAAGAGCCAAAGGCCAAAGTGCCCA...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACTGGAAAGACAGGATGTaGGAGGCTTGGGGGTCATCC +
Preference number: 5 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNWKDRM*EAWGSS
Trigger: GGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCA...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CAAGTGGAGACTCAACATCAGAGGCATATGAGGGCCTCAGCTAAGACTGCTCCCGTTTTTGCTCAGTCCTaGTCCCTGTCCTCCAAATGT +
Preference number: 5 (lower is better)
Translates to: QVETQHQRHMRASAKTAPVFAQS*SLSSKC
Trigger: ACATTTGGAGGACAGGGACAAGGACTGAGCAAAAAC...GGGAGCAGTCTTAGCTGAGGCCCTCATATGCCTCTGATGTTGAGTCTCCACTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GCTTGGGGGTCATCCCAAAGAGTTGGGCACTTTGGCCTTTGGCTCTTCCCGGGGCCGGGTGCTAGAGTTTaGTTCTATTGTGTTAATTAT +
Preference number: 5 (lower is better)
Translates to: AWGSSQRVGHFGLWLFPGPGARV*FYCVNY
Trigger: ATAATTAACACAATAGAACAAAACTCTAGCACCCGG...CCCCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACCCCCAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TCTGAACCGAACATCACAGGCCTTAAGCAACCTCCTGTGACTCTTCCCACGGCCTTTAAATTGCTGTGGTaGCCAATAGACGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: SEPNITGLKQPPVTLPTAFKLLW*PIDAGH
Trigger: ATGGCCTGCGTCTATTGGCAACCACAGCAATTTAAA...GGCCGTGGGAAGAGTCACAGGAGGTTGCTTAAGGCCTGTGATGTTCGGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GATTTTAAATTGCTGTGGTTGCCAATAGACGCAGGCCATGCATTCTTGCACCACGCACTTCGCAGGCATTaGCTCAGTCAGCCTCCAACG +
Preference number: 5 (lower is better)
Translates to: DFKLLWLPIDAGHAFLHHALRRH*LSQPPT
Trigger: CGTTGGAGGCTGACTGAGCAAATGCCTGCGAAGTGC...GTGGTGCAAGAATGCATGGCCTGCGTCTATTGGCAACCACAGCAATTTAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCCAAACAGTGACAACTTaGGGGGTTGGGTGTCCAATA +
Preference number: 5 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPQTVTT*GVGCPI
Trigger: TATTGGACACCCAACCCCCAAAGTTGTCACTGTTTG...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGAGGGTCTCACTTCTCTaGTGGGGTGCGTCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKRVSLL*WGASSS
Trigger: GGAGGACGACGCACCCCACAAGAGAAGTGAGACCCT...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS-3UTR CAA 90 bp AGACTGCATTTGGGTACCCTTTCCAGAACTCCATTTTATCTGCTCCGTGATGGCTCCTCCAGGAACTCATaGGCACGAGGGAATCGTTTC +
Preference number: 5 (lower is better)
Translates to: RLHLGTLSRTPFYLLRDGSSRNS*ARGNRF
Trigger: GAAACGATTCCCTCGTGCCAATGAGTTCCTGGAGGA...GCCATCACGGAGCAGATAAAATGGAGTTCTGGAAAGGGTACCCAAATGCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS-3UTR CAA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACCTATCTCCTCGTACTTaGGGGGTGGGTCACTGTAAG +
Preference number: 5 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNLSPRT*GVGHCK
Trigger: CTTACAGTGACCCACCCCCAAAGTACGAGGAGATAG...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAACAAACGTCCCACTACTaGTCAGCGCCAGGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREQTSHY*SAPGLA
Trigger: CGCCAACCCTGGCGCTGACAAGTAGTGGGACGTTTG...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTCAAACGTCCCACTACTaGTCAGCGCCAGGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFQTSHY*SAPGLA
Trigger: CGCCAACCCTGGCGCTGACAAGTAGTGGGACGTTTG...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTCCGGGTGCTAGAGTTTaGTTCTATTGTGTTAATTAT +
Preference number: 5 (lower is better)
Translates to: QPPGQACGHSGHNQLNGVPGARV*FYCVNY
Trigger: ATAATTAACACAATAGAACAAAACTCTAGCACCCGG...AACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATCCAGTGGGTAGTGGTTaGAACACAGCTGGTCCACAT +
Preference number: 5 (lower is better)
Translates to: RPVDILATINSMGLFLWHPVGSG*NTAGPH
Trigger: ATGTGGACCAGCTGTGTTCAAACCACTACCCACTGG...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAACAGAGGAGAAATGGTTaGGTGTTGAGGTCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQQRRNG*VLRSGG
Trigger: TCCTCCTGACCTCAACACCAAACCATTTCTCCTCTG...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp CCACTCTTGCACTTGTGCTTTCATTTTGAAAACCGGAGGCGATGGGAAGCGGGGCAGAATGGAGCTGCTTaGTCTTCTTCCAAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: PLLHLCFHFENRRRWEAGQNGAA*SSSKAF
Trigger: AAAGGCTTTGGAAGAAGACAAAGCAGCTCCATTCTG...CCCCGCTTCCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAGTGCAAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp TCCCACAGCCCCCAGGCCAGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGATCCTTAATATCTaGAGCCTTTTCTTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: SHSPQARPVDILATINSMGILNI*SLFFEK
Trigger: CTTTTCAAAGAAAAGGCTCAAGATATTAAGGATCCC...CATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCTGGCCTGGGGGCTGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCGAAAAGCTCCCACGTTaGAATATTTGGAGGCGAATG +
Preference number: 5 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPEKLPR*NIWRRM
Trigger: CATTCGCCTCCAAATATTCAAACGTGGGAGCTTTTC...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTACCGAATGGGCATCCTaGGCCTGCCATGATGCTCCC +
Preference number: 5 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFTEWAS*ACHDAP
Trigger: GGGAGCATCATGGCAGGCCAAGGATGCCCATTCGGT...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674441.1
CDS-3UTR CAA 90 bp TTCAATTTCAATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTAAAGAGTTGGGCACTTaGGCCTTTGGCTCTTCCCGG +
Preference number: 5 (lower is better)
Translates to: FNFNAPFAKSRLMPVGSGKELGT*AFGSSR
Trigger: CCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTT...ACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCATTGAAATTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAAAGAGTTGGGCACTTaGGCCTTTGGCTCTTCCCGG +
Preference number: 5 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHKELGT*AFGSSR
Trigger: CCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTT...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACGGTCATCCCAAAGAGTaGGGCACTTTGGCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHGHPKE*GTLAFG
Trigger: GCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACC...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGGGCAGCGGGCATTTCTaGGCAAACTCCCTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKGSGHF*ANSLWL
Trigger: GAGCCAAAGGGAGTTTGCCAAGAAATGCCCGCTGCC...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGAGGCAGCGGGCATTTCTaGGCAAACTCCCTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: SAVRYQYSETTVEALSLRGSGHF*ANSLWL
Trigger: GAGCCAAAGGGAGTTTGCCAAGAAATGCCCGCTGCC...TCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp AAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCACGAAAGAGTCAGCATaGTATCAAATCCACCTCCAT +
Preference number: 5 (lower is better)
Translates to: KIGDLGKRRSSRTGHKRPTKESA*YQIHLH
Trigger: ATGGAGGTGGATTTGATACAATGCTGACTCTTTCGT...GGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GTTTCCACTGTCACAAATTCACAATGTCAGAGCAAAATAACAGATGTGTTCAGGAACTCTGGCTGGGGGTaGCGATGCTCCACCCACTGG +
Preference number: 5 (lower is better)
Translates to: VSTVTNSQCQSKITDVFRNSGWG*RCSTHW
Trigger: CCAGTGGGTGGAGCATCGCAACCCCCAGCCAGAGTT...CCTGAACACATCTGTTATTTTGCTCTGACATTGTGAATTTGTGACAGTGGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp AGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCCCACGTTTGAATATTaGGAGGCGAATGATGGAGCG +
Preference number: 5 (lower is better)
Translates to: RAGTVQQSDISTVKQLLRPTFEY*EANDGA
Trigger: CGCTCCATCATTCGCCTCCAAATATTCAAACGTGGG...CCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000448324.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CATTTTGTTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGGAGGCTCCTCCTTCCTaGCTCCCCTCAATGAATCTT +
Preference number: 5 (lower is better)
Translates to: HFVFAQSLSLSSKCKQGQEAPPS*LPSMNL
Trigger: AAGATTCATTGAGGGGAGCAAGGAAGGAGGAGCCTC...CTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAACAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS-3UTR CAA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGAAAGAGTTGGGCACTTaGGCCTTTGGCTCTTCCCGG +
Preference number: 5 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKKELGT*AFGSSR
Trigger: CCGGGAAGAGCCAAAGGCCAAAGTGCCCAACTCTTT...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGGGTCATCCCAAAGAGTaGGGCACTTTGGCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKGHPKE*GTLAFG
Trigger: GCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACC...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAAGGTCATCCCAAAGAGTaGGGCACTTTGGCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREGHPKE*GTLAFG
Trigger: GCCAAAGGCCAAAGTGCCCAACTCTTTGGGATGACC...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAATGGAAAGACAGGATGTaGGAGGCTTGGGGGTCATCC +
Preference number: 5 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREWKDRM*EAWGSS
Trigger: GGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCA...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTTGGAAAGACAGGATGTaGGAGGCTTGGGGGTCATCC +
Preference number: 5 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFWKDRM*EAWGSS
Trigger: GGATGACCCCCAAGCCTCCAACATCCTGTCTTTCCA...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGCCAGTGGGTAGTGGTTaGAACACAGCTGGTCCACAT +
Preference number: 5 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGPVGSG*NTAGPH
Trigger: ATGTGGACCAGCTGTGTTCAAACCACTACCCACTGG...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAATTTAAATTGCTGTGGTaGCCAATAGACGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQFKLLW*PIDAGH
Trigger: ATGGCCTGCGTCTATTGGCAACCACAGCAATTTAAA...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp TGCCCAGGAGTACTCAGATTTCTTTCAGCTGCTGACACCCACAGAACAGAAGCCACGAAAGAGTCAGCATaGTATCAAATCCACCTCCAT +
Preference number: 5 (lower is better)
Translates to: CPGVLRFLSAADTHRTEATKESA*YQIHLH
Trigger: ATGGAGGTGGATTTGATACAATGCTGACTCTTTCGT...GGCTTCTGTTCTGTGGGTGTCAGCAGCTGAAAGAAATCTGAGTACTCCTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATCAAACAGTGACAACTTaGGGGGTTGGGTGTCCAATA +
Preference number: 5 (lower is better)
Translates to: RPVDILATINSMGLFLWHQTVTT*GVGCPI
Trigger: TATTGGACACCCAACCCCCAAAGTTGTCACTGTTTG...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATCTGTGCACCCCACTCTaGCACTTGTGCTTTCATTTT +
Preference number: 5 (lower is better)
Translates to: RPVDILATINSMGLFLWHLCTPL*HLCFHF
Trigger: AAAATGAAAGCACAAGTGCAAGAGTGGGGTGCACAG...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS GCA 90 bp CTAAAGGCTGAGGCTCCTCCTTCCTTGCTCCCCTCAATGAATCTTTaGAACTTCCAATTGGAAAGGACCTCAGAGATAGATGAGGAGATA +
Preference number: 5 (lower is better)
Translates to: LKAEAPPSLLPSMNL*NFQLERTSEIDEEI
Trigger: TATCTCCTCATCTATCTCTGAGGTCCTTTCCAATTGGAAGTTGCAAAGATTCATTGAGGGGAGCAAGGAAGGAGGAGCCTCAGCCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS-3UTR CAA 90 bp CAAAAATTTGCTACAATTTTTAAAGCACCACAGAGGAGAAATGGTTTGGTGTTGCCCAGAAGGCTCCCCTaGGCTATGCACAGTACCCCG +
Preference number: 5 (lower is better)
Translates to: QKFATIFKAPQRRNGLVLPRRLP*AMHSTP
Trigger: CGGGGTACTGTGCATAGCCAAGGGGAGCCTTCTGGG...CAACACCAAACCATTTCTCCTCTGTGGTGCTTTAAAAATTGTAGCAAATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CATTTTGTTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGTGTGATAAATTTCCCTaGGCCTCCTATGAACGGCCC +
Preference number: 5 (lower is better)
Translates to: HFVFAQSLSLSSKCKQGQCDKFP*ASYERP
Trigger: GGGCCGTTCATAGGAGGCCAAGGGAAATTTATCACA...CTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAACAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGTCAACTGACGGGAGATaGACTCTCCAAGTGGAGACT +
Preference number: 5 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGSTDGR*TLQVET
Trigger: AGTCTCCACTTGGAGAGTCAATCTCCCGTCAGTTGA...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TCTAGAAGACTCTTCCTAAGGCAAACCTCGCTGGCTCCCCGGCAATTCAAGCACATACAAACACAGAGTTaGAAAAGATATGTACAGGGC +
Preference number: 5 (lower is better)
Translates to: SRRLFLRQTSLAPRQFKHIQTQS*KRYVQG
Trigger: GCCCTGTACATATCTTTTCAAACTCTGTGTTTGTAT...GTGCTTGAATTGCCGGGGAGCCAGCGAGGTTTGCCTTAGGAAGAGTCTTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATCAGAATGGAGCTGCTTaGTCTTCTTCCAAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: RPVDILATINSMGLFLWHQNGAA*SSSKAF
Trigger: AAAGGCTTTGGAAGAAGACAAAGCAGCTCCATTCTG...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TTCAATTTCAATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTCCCACGTTTGAATATTaGGAGGCGAATGATGGAGCG +
Preference number: 5 (lower is better)
Translates to: FNFNAPFAKSRLMPVGSGPTFEY*EANDGA
Trigger: CGCTCCATCATTCGCCTCCAAATATTCAAACGTGGG...ACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCATTGAAATTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp GCTTCATTACTTGTCAAGCTGAAAAGCCACCTAGACCAGCAGCTCTGCTGCCAATTGTCAGATAAATTCTaGCTAGAGAGAGACTCGCTG +
Preference number: 5 (lower is better)
Translates to: ASLLVKLKSHLDQQLCCQLSDKF*LERDSL
Trigger: CAGCGAGTCTCTCTCTAGCAAGAATTTATCTGACAA...TTGGCAGCAGAGCTGCTGGTCTAGGTGGCTTTTCAGCTTGACAAGTAATGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp GTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGAGGGTGTACAACTGTTGAGGCATaGAGCTTGAGAGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: VRYQYSETTVEALSLRGCTTVEA*SLRGCA
Trigger: AGCACACCCTCTCAAGCTCAATGCCTCAACAGTTGT...ACACCCTCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000448324.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCACAACTGTTGAGGCATaGAGCTTGAGAGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: HCSAVRYQYSETTVEALSTTVEA*SLRGCA
Trigger: AGCACACCCTCTCAAGCTCAATGCCTCAACAGTTGT...GCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000448324.1
ENST00000674457.1
CDS-3UTR CAA 90 bp GCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACAGAACCTTTGCAACTTCCAATaGGAAAGGACCTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: AQSLSLSSKCKQGQKSQNLCNFQ*ERTSEI
Trigger: TATCTCTGAGGTCCTTTCCAATTGGAAGTTGCAAAG...GTTCTGTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS-3UTR CAA 90 bp AGGGCAGGCACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCCCCTCAATGAATCTTaGCAACTTCCAATTGGAAAG +
Preference number: 5 (lower is better)
Translates to: RAGTVQQSDISTVKQLLRPLNES*QLPIGK
Trigger: CTTTCCAATTGGAAGTTGCAAAGATTCATTGAGGGG...CCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTGCCTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS-3UTR CAA 90 bp CATTTTGTTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGCAGAGTAGACTGCATTaGGGTACCCTTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: HFVFAQSLSLSSKCKQGQQSRLH*GTLSRT
Trigger: AGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTG...CTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAACAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TTTTTGCTCAGTCCTTGTCCCTGTCCTCCAAATGTAAGCAAGGACAGAAATCACGTTTTTGCTCAGTCCTaGTCCCTGTCCTCCAAATGT +
Preference number: 5 (lower is better)
Translates to: FLLSPCPCPPNVSKDRNHVFAQS*SLSSKC
Trigger: ACATTTGGAGGACAGGGACAAGGACTGAGCAAAAAC...GTGATTTCTGTCCTTGCTTACATTTGGAGGACAGGGACAAGGACTGAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AAAGTTAAAAAGAAAATAGGAGACCTCGGAAAGAGGCGTTCATCCAGGACAGGGGCTGCACACCGGCTATaGTTTCAGATAAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: KVKKKIGDLGKRRSSRTGAAHRL*FQISNE
Trigger: CTCATTGCTTATCTGAAACAATAGCCGGTGTGCAGC...CCCTGTCCTGGATGAACGCCTCTTTCCGAGGTCTCCTATTTTCTTTTTAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGACCCACGTTTGAATATTaGGAGGCGAATGATGGAGCG +
Preference number: 5 (lower is better)
Translates to: SAVRYQYSETTVEALSLRPTFEY*EANDGA
Trigger: CGCTCCATCATTCGCCTCCAAATATTCAAACGTGGG...TCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000448324.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTAAGCAAGTTTGTCTGTaGCCCCCAGGCTCCAATGAA +
Preference number: 5 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFKQVCL*PPGSNE
Trigger: TTCATTGGAGCCTGGGGGCAACAGACAAACTTGCTT...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp TCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGAAAGCAAGTTTGTCTGTaGCCCCCAGGCTCCAATGAA +
Preference number: 5 (lower is better)
Translates to: SAVRYQYSETTVEALSLRKQVCL*PPGSNE
Trigger: TTCATTGGAGCCTGGGGGCAACAGACAAACTTGCTT...TCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGCAGAGTAGACTGCATTaGGGTACCCTTTCCAGAACT +
Preference number: 5 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKQSRLH*GTLSRT
Trigger: AGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTG...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TTCAATTTCAATGCACCATTCGCAAAAAGTAGGCTCATGCCAGTGGGTAGTGGTCAGAATGGAGCTGCTTaGTCTTCTTCCAAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: FNFNAPFAKSRLMPVGSGQNGAA*SSSKAF
Trigger: AAAGGCTTTGGAAGAAGACAAAGCAGCTCCATTCTG...ACCACTACCCACTGGCATGAGCCTACTTTTTGCGAATGGTGCATTGAAATTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp CCTAAAACTCCACAGTTAGGGAATTATTTGGCAACAAGGAGGCTAAGGCTGTTTACTTGTGCTTTCATTTaGAAAACCGGAGGCGATGGG +
Preference number: 5 (lower is better)
Translates to: PKTPQLGNYLATRRLRLFTCAFI*KTGGDG
Trigger: CCCATCGCCTCCGGTTTTCAAAATGAAAGCACAAGT...AAACAGCCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTGTGGAGTTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp GTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGAGAGGGTGTGAAAAGCTCCCACGTTaGAATATTTGGAGGCGAATG +
Preference number: 5 (lower is better)
Translates to: VRYQYSETTVEALSLRGCEKLPR*NIWRRM
Trigger: CATTCGCCTCCAAATATTCAAACGTGGGAGCTTTTC...ACACCCTCTCAAGCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000448324.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGTTTTAAAAGGGACACTTTAGGATCTTCTCCTGAGATGCGCACCATCGTTAAGCAGTTAGGGAATTATTaGGCAACAAGGAGGCTAAGG +
Preference number: 5 (lower is better)
Translates to: CFKRDTLGSSPEMRTIVKQLGNY*ATRRLR
Trigger: CCTTAGCCTCCTTGTTGCCAAATAATTCCCTAACTG...CTTAACGATGGTGCGCATCTCAGGAGAAGATCCTAAAGTGTCCCTTTTAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp TGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATAAGAGAATTTAAATTGCTGTGGTaGCCAATAGACGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: WTFWPQSTQWGYSFGIREFKLLW*PIDAGH
Trigger: ATGGCCTGCGTCTATTGGCAACCACAGCAATTTAAA...TTCTCTTATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AGGCCTGTGGACATTCTGGCCACAATCAACTCAATGGGGTTATTCCTTTGGCATGGGATCCTTAATATCTaGAGCCTTTTCTTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: RPVDILATINSMGLFLWHGILNI*SLFFEK
Trigger: CTTTTCAAAGAAAAGGCTCAAGATATTAAGGATCCC...ATGCCAAAGGAATAACCCCATTGAGTTGATTGTGGCCAGAATGTCCACAGGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370353.3
ENST00000674457.1
CDS-3UTR CAA 90 bp CACTGTTCAGCAGTCAGATATCAGTACAGTGAAACAACTGTTGAGGCATTGAGCTTGTCAGATAAATTCTaGCTAGAGAGAGACTCGCTG +
Preference number: 5 (lower is better)
Translates to: HCSAVRYQYSETTVEALSLSDKF*LERDSL
Trigger: CAGCGAGTCTCTCTCTAGCAAGAATTTATCTGACAA...GCTCAATGCCTCAACAGTTGTTTCACTGTACTGATATCTGACTGCTGAACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000448324.1
ENST00000674457.1
CDS-3UTR CAA 90 bp AAGGAGGCAAACAGTGACAACTTTGGGGGTTGGGTGTCCAATATAGTTAATGCCATACAAACACAGAGTTaGAAAAGATATGTACAGGGC +
Preference number: 5 (lower is better)
Translates to: KEANSDNFGGWVSNIVNAIQTQS*KRYVQG
Trigger: GCCCTGTACATATCTTTTCAAACTCTGTGTTTGTAT...GGCATTAACTATATTGGACACCCAACCCCCAAAGTTGTCACTGTTTGCCTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370353.3
ENST00000674441.1
ENST00000674457.1
CDS GCA 72 bp TCTCGTTCTCCGGGCCCAGAAGGCGGCCGCCCTGTTTaGGCACGCAGCCCGCCACCTCGCTGCTGCGCCTCT +
Preference number: 6 (lower is better)
Translates to: SRSPGPEGGRPV*ARSPPPRCCAS
Trigger: AGAGGCGCAGCAGCGAGGTGGCGGGCTGCGTGCGCAAACAGGGCGGCCGCCTTCTGGGCCCGGAGAACGAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674457.1
CDS CAA 72 bp TTCTCGTTCTCCGGGCCCAGAAGGCGGCCGCCCTGTTaGCGCACGCAGCCCGCCACCTCGCTGCTGCGCCTC +
Preference number: 6 (lower is better)
Translates to: FSFSGPRRRPPC*RTQPATSLLRL
Trigger: GAGGCGCAGCAGCGAGGTGGCGGGCTGCGTGCGCAAACAGGGCGGCCGCCTTCTGGGCCCGGAGAACGAGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674457.1
CDS CAA 90 bp GGGTCTCACTTCTCGTTCTCCGGGCCCAGAAGGCGGCCGCCCTGTTaGCGCACGCAGCCCGCCACCTCGCTGCTGCGCCTCTTCCAGCAG +
Preference number: 6 (lower is better)
Translates to: GSHFSFSGPRRRPPC*RTQPATSLLRLFQQ
Trigger: CTGCTGGAAGAGGCGCAGCAGCGAGGTGGCGGGCTGCGTGCGCAAACAGGGCGGCCGCCTTCTGGGCCCGGAGAACGAGAAGTGAGACCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674457.1
CDS GCA 72 bp CCCAGCACCACCTGGGGGCTGTTCGCTGCCTCTCGGTaGCCAGAAGGCTCCCCTTGGCTATGCACAGTACCC +
Preference number: 6 (lower is better)
Translates to: PSTTWGLFAASR*PEGSPWLCTVP
Trigger: GGGTACTGTGCATAGCCAAGGGGAGCCTTCTGGGCACCGAGAGGCAGCGAACAGCCCCCAGGTGGTGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS GCA 72 bp GGGGTGGGTCACTGTAAGACACGCTGGCCTCCTCACTaGTGCTCTCTTGGGGCGCAGTCACCTCCTCGTAGG +
Preference number: 6 (lower is better)
Translates to: GVGHCKTRWPPH*CSLGAQSPPRR
Trigger: CCTACGAGGAGGTGACTGCGCCCCAAGAGAGCAGCAGTGAGGAGGCCAGCGTGTCTTACAGTGACCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS CCA 72 bp CTGTTCGCTGCCTCTCGGTGCCCAGAAGGCTCCCCTTaGCTATGCACAGTACCCCGGTACACCATGACCCGG +
Preference number: 6 (lower is better)
Translates to: LFAASRCPEGSP*LCTVPRYTMTR
Trigger: CCGGGTCATGGTGTACCGGGGTACTGTGCATAGCCAAGGGGAGCCTTCTGGGCACCGAGAGGCAGCGAACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS GCA 72 bp GTGGGTCACTGTAAGACACGCTGGCCTCCTCACTGCTaGTCTCTTGGGGCGCAGTCACCTCCTCGTAGGAGG +
Preference number: 6 (lower is better)
Translates to: VGHCKTRWPPHC*SLGAQSPPRRR
Trigger: CCTCCTACGAGGAGGTGACTGCGCCCCAAGAGAGCAGCAGTGAGGAGGCCAGCGTGTCTTACAGTGACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS CCA 72 bp AGCGCCAGGGTTGGCGGCCACTATCTCCTCGTACTTTaGGGGTGGGTCACTGTAAGACACGCTGGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: SARVGGHYLLVL*GWVTVRHAGLL
Trigger: GAGGAGGCCAGCGTGTCTTACAGTGACCCACCCCCAAAGTACGAGGAGATAGTGGCCGCCAACCCTGGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS CAA 72 bp CAGCGCCAGGGTTGGCGGCCACTATCTCCTCGTACTTaGGGGGTGGGTCACTGTAAGACACGCTGGCCTCCT +
Preference number: 6 (lower is better)
Translates to: QRQGWRPLSPRT*GVGHCKTRWPP
Trigger: AGGAGGCCAGCGTGTCTTACAGTGACCCACCCCCAAAGTACGAGGAGATAGTGGCCGCCAACCCTGGCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS CCA 72 bp CCTCGTACTTTGGGGGTGGGTCACTGTAAGACACGCTaGCCTCCTCACTGCTGCTCTCTTGGGGCGCAGTCA +
Preference number: 6 (lower is better)
Translates to: PRTLGVGHCKTR*PPHCCSLGAQS
Trigger: TGACTGCGCCCCAAGAGAGCAGCAGTGAGGAGGCCAGCGTGTCTTACAGTGACCCACCCCCAAAGTACGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS CAA 72 bp AGGGCACAAACGTCCCACTACTTGTCAGCGCCAGGGTaGGCGGCCACTATCTCCTCGTACTTTGGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: RAQTSHYLSAPG*AATISSYFGGG
Trigger: CCCACCCCCAAAGTACGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACAAGTAGTGGGACGTTTGTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS CAA 72 bp GCGTTCATCCAGGACAGGGCACAAACGTCCCACTACTaGTCAGCGCCAGGGTTGGCGGCCACTATCTCCTCG +
Preference number: 6 (lower is better)
Translates to: AFIQDRAQTSHY*SAPGLAATISS
Trigger: CGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACAAGTAGTGGGACGTTTGTGCCCTGTCCTGGATGAACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS CAA 90 bp ACTACTTGTCAGCGCCAGGGTTGGCGGCCACTATCTCCTCGTACTTaGGGGGTGGGTCACTGTAAGACACGCTGGCCTCCTCACTGCTGC +
Preference number: 6 (lower is better)
Translates to: TTCQRQGWRPLSPRT*GVGHCKTRWPPHCC
Trigger: GCAGCAGTGAGGAGGCCAGCGTGTCTTACAGTGACCCACCCCCAAAGTACGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACAAGTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS GCA 72 bp GGGTCTCACTTCTCTTGTGGGGTGCGTCGTCCTCCATaGAGCCACCCATGGCTTCCGCTGCTTCTCATTCTG +
Preference number: 6 (lower is better)
Translates to: GSHFSCGVRRPP*SHPWLPLLLIL
Trigger: CAGAATGAGAAGCAGCGGAAGCCATGGGTGGCTGCATGGAGGACGACGCACCCCACAAGAGAAGTGAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS CAA 90 bp CGGAAAGAGGCGTTCATCCAGGACAGGGCACAAACGTCCCACTACTaGTCAGCGCCAGGGTTGGCGGCCACTATCTCCTCGTACTTTGGG +
Preference number: 6 (lower is better)
Translates to: RKEAFIQDRAQTSHY*SAPGLAATISSYFG
Trigger: CCCAAAGTACGAGGAGATAGTGGCCGCCAACCCTGGCGCTGACAAGTAGTGGGACGTTTGTGCCCTGTCCTGGATGAACGCCTCTTTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS TCA 72 bp CAGGACCGAATGGGCATCCTTGGCCTCCAGAAACACTaGGGAGAGAGCCCTACTGAGGCCTGCCATGATGCT +
Preference number: 6 (lower is better)
Translates to: QDRMGILGLQKH*GESPTEACHDA
Trigger: AGCATCATGGCAGGCCTCAGTAGGGCTCTCTCCTCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS CAA 90 bp AACTCATTGGCACGAGGGAATCGTTTCAGGACCGAATGGGCATCCTaGGCCTCCAGAAACACTGAGGAGAGAGCCCTACTGAGGCCTGCC +
Preference number: 6 (lower is better)
Translates to: NSLARGNRFRTEWAS*ASRNTEERALLRPA
Trigger: GGCAGGCCTCAGTAGGGCTCTCTCCTCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGGTCCTGAAACGATTCCCTCGTGCCAATGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS CAA 72 bp GCACGAGGGAATCGTTTCAGGACCGAATGGGCATCCTaGGCCTCCAGAAACACTGCCATGATGCTCCCTCAG +
Preference number: 6 (lower is better)
Translates to: ARGNRFRTEWAS*ASRNTAMMLPQ
Trigger: CTGAGGGAGCATCATGGCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGGTCCTGAAACGATTCCCTCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000448726.5
ENST00000538575.5
ENST00000652529.1
ENST00000674457.1
CDS CAA 72 bp GCACGAGGGAATCGTTTCAGGACCGAATGGGCATCCTaGGCCTCCAGAAACACTGAGGAGAGAGCCCTACTG +
Preference number: 6 (lower is better)
Translates to: ARGNRFRTEWAS*ASRNTEERALL
Trigger: CAGTAGGGCTCTCTCCTCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGGTCCTGAAACGATTCCCTCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS CCA 72 bp AACTCATTGGCACGAGGGAATCGTTTCAGGACCGAATaGGCATCCTTGGCCTGCCATGATGCTCCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: NSLARGNRFRTE*ASLACHDAPSA
Trigger: AGCTGAGGGAGCATCATGGCAGGCCAAGGATGCCCATTCGGTCCTGAAACGATTCCCTCGTGCCAATGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674374.1
ENST00000674441.1
CDS TCA 72 bp TTGAATATTTGGAGGCGAATGATGGAGCGGCCAGTCTaGCAGCGAAGCATCTGCGGTTCTGAGCATAGGAGG +
Preference number: 6 (lower is better)
Translates to: LNIWRRMMERPV*QRSICGSEHRR
Trigger: CCTCCTATGCTCAGAACCGCAGATGCTTCGCTGTCAGACTGGCCGCTCCATCATTCGCCTCCAAATATTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448324.1
CDS CCA 72 bp AACTCATTGGCACGAGGGAATCGTTTCAGGACCGAATaGGCATCCTTGGCCTCCAGAAACACTGCCATGATG +
Preference number: 6 (lower is better)
Translates to: NSLARGNRFRTE*ASLASRNTAMM
Trigger: CATCATGGCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGGTCCTGAAACGATTCCCTCGTGCCAATGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370353.3
ENST00000448726.5
ENST00000538575.5
ENST00000652529.1
ENST00000674457.1
CDS CCA 72 bp AACTCATTGGCACGAGGGAATCGTTTCAGGACCGAATaGGCATCCTTGGCCTCCAGAAACACTGAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: NSLARGNRFRTE*ASLASRNTEER
Trigger: TCTCTCCTCAGTGTTTCTGGAGGCCAAGGATGCCCATTCGGTCCTGAAACGATTCCCTCGTGCCAATGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS CCA 72 bp CTGCTCCGTGATGGCCCTAGTGGCTATGCCTTAGGCTaGGTGTCTTTCCTTGCTTCTGATTGGTCTGCATTA +
Preference number: 6 (lower is better)
Translates to: LLRDGPSGYALG*VSFLASDWSAL
Trigger: TAATGCAGACCAATCAGAAGCAAGGAAAGACACCCAGCCTAAGGCATAGCCACTAGGGCCATCACGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS CCA 72 bp GCTCTGCGAGGGGTCTCGGACAGAGTAGACTGCATTTaGGTACCCTTTCCAGAACTCCATCGTTTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: ALRGVSDRVDCI*VPFPELHRFLF
Trigger: AAAGAGAAAACGATGGAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTGTCCGAGACCCCTCGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000652529.1
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS CAA 72 bp AGCTCTGCGAGGGGTCTCGGACAGAGTAGACTGCATTaGGGTACCCTTTCCAGAACTCCATCGTTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: SSARGLGQSRLH*GTLSRTPSFSL
Trigger: AAGAGAAAACGATGGAGTTCTGGAAAGGGTACCCAAATGCAGTCTACTCTGTCCGAGACCCCTCGCAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000370353.3
ENST00000538575.5
ENST00000652529.1
ENST00000674374.1
ENST00000674441.1
ENST00000674457.1
CDS CCA 72 bp TATGCCTTAGGCTGGGTGTCTTTCCTTGCTTCTGATTaGTCTGCATTACCAGGGCCTGTTCTTGCTATTCCT +
Preference number: 6 (lower is better)
Translates to: YALGWVSFLASD*SALPGPVLAIP
Trigger: AGGAATAGCAAGAACAGGCCCTGGTAATGCAGACCAATCAGAAGCAAGGAAAGACACCCAGCCTAAGGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370354.5
CDS GCA 72 bp GAGGCTCCTCCTTCCTTGCTCCCCTCAATGAATCTTTaGAACTTCCAATTGGAAAGGACCTCAGAGATAGAT +
Preference number: 6 (lower is better)
Translates to: EAPPSLLPSMNL*NFQLERTSEID
Trigger: ATCTATCTCTGAGGTCCTTTCCAATTGGAAGTTGCAAAGATTCATTGAGGGGAGCAAGGAAGGAGGAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS CAA 72 bp AAAGGAAAGCTCCTAAAGGCTGAGGCTCCTCCTTCCTaGCTCCCCTCAATGAATCTTTGCAACTTCCAATTG +
Preference number: 6 (lower is better)
Translates to: KGKLLKAEAPPS*LPSMNLCNFQL
Trigger: CAATTGGAAGTTGCAAAGATTCATTGAGGGGAGCAAGGAAGGAGGAGCCTCAGCCTTTAGGAGCTTTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370353.3
CDS CAA 72 bp TCCTTGCTCCCCTCAATGAATCTTTGCAACTTCCAATaGGAAAGGACCTCAGAGATAGATGAGGAGATACAG +
Preference number: 6 (lower is better)
Translates to: SLLPSMNLCNFQ*ERTSEIDEEIQ
Trigger: CTGTATCTCCTCATCTATCTCTGAGGTCCTTTCCAATTGGAAGTTGCAAAGATTCATTGAGGGGAGCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370353.3