RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRRG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000126460

Ensembl transcript IDs: ENST00000246794.10, ENST00000543867.2, ENST00000596877.5, ENST00000597121.5

Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTaGGTACCCTGTGGCACTGGAGGGGGCTGTCAGGTCATATCTGCC +
Preference number: 1 (lower is better)
Translates to: GSARRHACAQAGLCV*VPCGTGGGCQVISA
Trigger: GGCAGATATGACCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR CCA 90 bp CTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGCCGGGGCTaGGCTCCTGGGTCCGAATTTCCCCGCGCGTCTGCCTACCACGGG +
Preference number: 1 (lower is better)
Translates to: LSGHICPYTRWHSRG*APGSEFPRASAYHG
Trigger: CCCGTGGTAGGCAGACGCGCGGGGAAATTCGGACCCAGGAGCCCAGCCCCGGCTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR CCA 90 bp CGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGGCACTaGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCAC +
Preference number: 1 (lower is better)
Translates to: RVCTGGALRVRTLWH*RGLSGHICPYTRWH
Trigger: GTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGCACACGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR TCA 90 bp CCAGCTTCGGCGTCTATGAGGCCTAGCGGCTTCCGGAATCCGGTATaGATCAGGGGCACGGTTCGGAGAGCCGGGTCTCGAAAGCAGCTC +
Preference number: 1 (lower is better)
Translates to: PASASMRPSGFRNPV*IRGTVRRAGSRKQL
Trigger: GAGCTGCTTTCGAGACCCGGCTCTCCGAACCGTGCCCCTGATTCATACCGGATTCCGGAAGCCGCTAGGCCTCATAGACGCCGAAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR CCA 90 bp AAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCCTGTaGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGA +
Preference number: 1 (lower is better)
Translates to: KTRVCTGGALRVRTL*HWRGLSGHICPYTR
Trigger: TCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR TCA 90 bp AGGAACACCTCTCTTCCAGACACTCCCGTTCCAGGTTCCCTGGTGTaGGCAGCTCCAGGTCCCAGTGGTTGGCTCTTGGAATCCGGGTAT +
Preference number: 1 (lower is better)
Translates to: RNTSLPDTPVPGSLV*AAPGPSGWLLESGY
Trigger: ATACCCGGATTCCAAGAGCCAACCACTGGGACCTGGAGCTGCTCACACCAGGGAACCTGGAACGGGAGTGTCTGGAAGAGAGGTGTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR GCA 90 bp GAAGGGTTTTTATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTaGAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCAAATATGCCC +
Preference number: 1 (lower is better)
Translates to: EGFLFRGTAQLQLPG*NASLPAPSALANMP
Trigger: GGGCATATTTGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATAAAAACCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp GGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCCGGCGGAAACGCGTGTaGCAGGGCAGGCCTCGGGCC +
Preference number: 2 (lower is better)
Translates to: GECTKTRVCTGGALRVRTRRKRV*QGRPRA
Trigger: GGCCCGAGGCCTGCCCTGGCACACGCGTTTCCGCCG...GGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR TCA 90 bp GGTCCGAATTTCCCCGCGCGTCTGCCTACCACGGGGGCGGAACTGACCAGTGCCGAGTGTGGGGGCCCGTaGGGGGCCAGGACACGGGAA +
Preference number: 2 (lower is better)
Translates to: GPNFPARLPTTGAELTSAECGGP*GARTRE
Trigger: TTCCCGTGTCCTGGCCCCTCACGGGCCCCCACACTC...GGCACTGGTCAGTTCCGCCCCCGTGGTAGGCAGACGCGCGGGGAAATTCGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR CCA 90 bp CAGGCGGGGCTCTGCGTGTGCGTACCCTGTGGCACTGGAGGGGGCTGTCAGGTCACGGTCAGGAGAGTGTaGGGGCCCGTGAGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: QAGLCVCVPCGTGGGCQVTVRRV*GPVRGQ
Trigger: CTGGCCCCTCACGGGCCCCCACACTCTCCTGACCGT...GACCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR CCA 90 bp GCCGGGGCTGGGCTCCTGGGTCCGAATTTCCCCGCGCGTCTGCCTACCACGGGGTGGCACAGCCGGGGCTaGGCTCCTGGGTCCGAATTT +
Preference number: 2 (lower is better)
Translates to: AGAGLLGPNFPARLPTTGWHSRG*APGSEF
Trigger: AAATTCGGACCCAGGAGCCCAGCCCCGGCTGTGCCA...CCCCGTGGTAGGCAGACGCGCGGGGAAATTCGGACCCAGGAGCCCAGCCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR TCA 90 bp TCAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCCCACGGGGGCGGAACTaGCCAGTGCCCTCACGGTCA +
Preference number: 2 (lower is better)
Translates to: STPAPWVQCEPARTERACPRGRN*PVPSRS
Trigger: TGACCGTGAGGGCACTGGTCAGTTCCGCCCCCGTGG...GCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp GGTCCGAATTTCCCCGCGCGTCTGCCTACCACGGGGGCGGAACTGACCAGTGCCGCACAGGCGGGGCTCTaGGTGTGCGTACCCTGTGGC +
Preference number: 2 (lower is better)
Translates to: GPNFPARLPTTGAELTSAAQAGL*VCVPCG
Trigger: GCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGC...GGCACTGGTCAGTTCCGCCCCCGTGGTAGGCAGACGCGCGGGGAAATTCGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR CCA 90 bp CTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCAAATCCGGGGCTGGGCTCCTaGGTCCGAATTTCCCCGCGC +
Preference number: 2 (lower is better)
Translates to: LQLPGCNASLPAPSALANPGLGS*VRISPR
Trigger: GCGCGGGGAAATTCGGACCCAGGAGCCCAGCCCCGG...ATTTGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR TCA 90 bp ACGAAGTGCCCCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGGAGTGTGGGGGCCCGTaGGGGGCCAGGACACGGGAA +
Preference number: 2 (lower is better)
Translates to: TKCPCTARGVHEDTRVHRECGGP*GARTRE
Trigger: TTCCCGTGTCCTGGCCCCTCACGGGCCCCCACACTC...CCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGGGGCACTTCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp GGGCTCTGCGTGTGCGTACCCTGTGGCACTGGAGGGGGCTGTCAGGTCATATCTCGGCGGAAACGCGTGTaGCAGGGCAGGCCTCGGGCC +
Preference number: 2 (lower is better)
Translates to: GLCVCVPCGTGGGCQVISRRKRV*QGRPRA
Trigger: GGCCCGAGGCCTGCCCTGGCACACGCGTTTCCGCCG...AGATATGACCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp GCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGACGAAGACACGCGTGTaGACAGGCGGGGCTCTGCGT +
Preference number: 2 (lower is better)
Translates to: ARGVHEDTRVHRRGSACATKTRV*TGGALR
Trigger: ACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGT...CGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp ACCACGGGGGCGGAACTGACCAGTGCCCTCACGGTCAGGAGAGTGTGGGGGCCCGTACCGCACGGGGAGTaGACGAAGACACGCGTGTGC +
Preference number: 2 (lower is better)
Translates to: TTGAELTSALTVRRVWGPVPHGE*TKTRVC
Trigger: GCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTAC...GGGCCCCCACACTCTCCTGACCGTGAGGGCACTGGTCAGTTCCGCCCCCGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp GGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCCTCCAGCTCCCTGGGTaGAATGCGAGCCTGCCCGCA +
Preference number: 2 (lower is better)
Translates to: GECTKTRVCTGGALRVRTLQLPG*NASLPA
Trigger: TGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAG...GGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR CCA 90 bp CTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCAAATTGGGGACAGGGCTGCTaGCCTCGGTGCTGTCGCCAG +
Preference number: 2 (lower is better)
Translates to: LQLPGCNASLPAPSALANWGQGC*PRCCRQ
Trigger: CTGGCGACAGCACCGAGGCCAGCAGCCCTGTCCCCA...ATTTGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR-3UTR CCA 90 bp CAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCAATGAGCCCGGCCTCTTaGGGACAGGGCTGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: QLQLPGCNASLPAPSALAMSPAS*GQGCWP
Trigger: AGGCCAGCAGCCCTGTCCCCAAGAGGCCGGGCTCAT...TGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR-3UTR TCA 90 bp GTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGAGGCCTCGGGCCGGATaGCCCCTACTCCCACCATTC +
Preference number: 2 (lower is better)
Translates to: VHEDTRVHRRGSACAYPVRPRAG*PLLPPF
Trigger: GAATGGTGGGAGTAGGGGTCATCCGGCCCGAGGCCT...CACAGGGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp TCAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCGTACCGCACGGGGAGTaGACGAAGACACGCGTGTGC +
Preference number: 2 (lower is better)
Translates to: STPAPWVQCEPARTERACVPHGE*TKTRVC
Trigger: GCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTAC...GCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp GGTCCGAATTTCCCCGCGCGTCTGCCTACCACGGGGGCGGAACTGACCAGTGCCCCCTGGGTTACGAAGTaGCCCTGTACCGCACGGGGA +
Preference number: 2 (lower is better)
Translates to: GPNFPARLPTTGAELTSAPWVTK*PCTARG
Trigger: TCCCCGTGCGGTACAGGGGCACTTCGTAACCCAGGG...GGCACTGGTCAGTTCCGCCCCCGTGGTAGGCAGACGCGCGGGGAAATTCGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp ACGAAGTGCCCCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGGGTGCAATGCGAGCCTaGCCGCACCGAGCGCGCTTG +
Preference number: 2 (lower is better)
Translates to: TKCPCTARGVHEDTRVHRGAMRA*PHRARL
Trigger: CAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACC...CCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGGGGCACTTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp ACGAAGTGCCCCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGGCTCCCTGGGTGCAATaGGAGCCTGCCCGCACCGAG +
Preference number: 2 (lower is better)
Translates to: TKCPCTARGVHEDTRVHRAPWVQ*EPARTE
Trigger: CTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGC...CCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGGGGCACTTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR CCA 90 bp CACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGGCACTGGAGGGCGTACCCTGTGGCACTaGAGGGGGCTGTCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: HACAQAGLCVCVPCGTGGRTLWH*RGLSGH
Trigger: ATGACCTGACAGCCCCCTCCAGTGCCACAGGGTACG...CCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR TCA 90 bp GGAACAGCTCAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCCAGCTTCGGCGTCTATaGGGCCTAGCGGCTTCCGGA +
Preference number: 2 (lower is better)
Translates to: GTAQLQLPGCNASLPAPSQLRRL*GLAASG
Trigger: TCCGGAAGCCGCTAGGCCTCATAGACGCCGAAGCTG...GCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR CCA 90 bp TACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGCGTACCCTGTGGCACTaGAGGGGGCTGTCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: YRTGSARRHACAQAGLCVRTLWH*RGLSGH
Trigger: ATGACCTGACAGCCCCCTCCAGTGCCACAGGGTACG...CACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp TTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACTCTTGGGGACAGGGCTaGTGGCCTCGGTGCTGTCGC +
Preference number: 2 (lower is better)
Translates to: LGEQLNSSSLGAMRACPHSWGQG*WPRCCR
Trigger: GCGACAGCACCGAGGCCAGCAGCCCTGTCCCCAAGA...GTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR-3UTR CCA 90 bp TGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGCCGGGGCACGGTCAGGAGAGTGTaGGGGCCCGTGAGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: WRGLSGHICPYTRWHSRGTVRRV*GPVRGQ
Trigger: CTGGCCCCTCACGGGCCCCCACACTCTCCTGACCGT...GCCCCGGCTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR CCA 90 bp CCCGCCCTTTCCCTGGGTTACGAAGTGCCCCTGTACCGCACGGGGAGTGCACGATGCCCATACACAAGATaGCACAGCCGGGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: PALSLGYEVPLYRTGSARCPYTR*HSRGWA
Trigger: AGCCCAGCCCCGGCTGTGCCATCTTGTGTATGGGCA...TCGTGCACTCCCCGTGCGGTACAGGGGCACTTCGTAACCCAGGGAAAGGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp CCTGGGTTACGAAGTGCCCCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGGGCGGAACTGACCAGTaGCCTCACGGTCAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: PGLRSAPVPHGECTKTRVGGTDQ*PHGQES
Trigger: ACTCTCCTGACCGTGAGGGCACTGGTCAGTTCCGCC...CACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGGGGCACTTCGTAACCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR CCA 90 bp GCTCCTGGGTCCGAATTTCCCCGCGCGTCTGCCTACCACGGGGGCGGAACTGACCCAGGTCCCAGTGGTTaGCTCTTGGAATCCGGGTAT +
Preference number: 2 (lower is better)
Translates to: APGSEFPRASAYHGGGTDPGPSG*LLESGY
Trigger: ATACCCGGATTCCAAGAGCCAACCACTGGGACCTGG...GTCAGTTCCGCCCCCGTGGTAGGCAGACGCGCGGGGAAATTCGGACCCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR-3UTR CCA 90 bp TATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGAGGCAGGGGCGTCGGTaGGCCCAGAGGGTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: YLGEQLNSSSLGAMRACPRQGRR*AQRVQR
Trigger: CCTTTGAACCCTCTGGGCCCACCGACGCCCCTGCCT...CGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR-3UTR GCA 90 bp GGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCGTCCACGCCCTCCTTTaGCATTGTAGATGTAGCTCT +
Preference number: 2 (lower is better)
Translates to: GECTKTRVCTGGALRVRTVHALL*HCRCSS
Trigger: AGAGCTACATCTACAATGGCAAAGGAGGGCGTGGAC...GGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR-3UTR CCA 90 bp AAACATGTGTATATCCATACGCGGCGGAAACGCGTGTGCCAGGGCAGGCCTCGGCCGTTCCAGGTTCCCTaGTGTGAGCAGCTCCAGGTC +
Preference number: 2 (lower is better)
Translates to: KHVYIHTRRKRVCQGRPRPFQVP*CEQLQV
Trigger: GACCTGGAGCTGCTCACACCAGGGAACCTGGAACGG...CCGAGGCCTGCCCTGGCACACGCGTTTCCGCCGCGTATGGATATACACATGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR-3UTR TCA 90 bp GCCAGGACACGGGAACACGTTGCCGAAAACATGTGTATATCCATACGCGGCGGACAGCTTCGGCGTCTATaGGGCCTAGCGGCTTCCGGA +
Preference number: 2 (lower is better)
Translates to: ARTREHVAENMCISIRGGQLRRL*GLAASG
Trigger: TCCGGAAGCCGCTAGGCCTCATAGACGCCGAAGCTG...TCCGCCGCGTATGGATATACACATGTTTTCGGCAACGTGTTCCCGTGTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp GGTTTTTATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCAATGCGAGCCGCGGGGCTCTGCGTGTaGGTACCCTGTGGCACTGGA +
Preference number: 2 (lower is better)
Translates to: GFYLGEQLNSSSLGAMRAAGLCV*VPCGTG
Trigger: TCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGC...GGCTCGCATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATAAAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp CTTTCCGAAGGGTTTTTATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCATTTCCCCGCGCGTCTaGCTACCACGGGGGCGGAAC +
Preference number: 2 (lower is better)
Translates to: LSEGFLFRGTAQLQLPGCISPRV*LPRGRN
Trigger: GTTCCGCCCCCGTGGTAGGCAGACGCGCGGGGAAAT...GCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATAAAAACCCTTCGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR TCA 90 bp GTTGCCGAAAACATGTGTATATCCATACGCGGCGGAAACGCGTGTGCCAGGGCATTCCGGAATCCGGTATaGATCAGGGGCACGGTTCGG +
Preference number: 2 (lower is better)
Translates to: VAENMCISIRGGNACARAFRNPV*IRGTVR
Trigger: CCGAACCGTGCCCCTGATTCATACCGGATTCCGGAA...TGCCCTGGCACACGCGTTTCCGCCGCGTATGGATATACACATGTTTTCGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR GCA 90 bp CCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCAAATATGACACGGGAACACGTTaGCGAAAACATGTGTATATC +
Preference number: 2 (lower is better)
Translates to: PAPWVQCEPARTERACKYDTGTR*RKHVYI
Trigger: GATATACACATGTTTTCGGCAACGTGTTCCCGTGTC...ATATTTGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR TCA 90 bp CTCCCAAAAGCGCTCCGTGAGAGTGTTGTCCTCAAAATACTCCCTGGCCTCTTCTTCCGGAATCCGGTATaGATCAGGGGCACGGTTCGG +
Preference number: 2 (lower is better)
Translates to: LPKALRESVVLKILPGLFFRNPV*IRGTVR
Trigger: CCGAACCGTGCCCCTGATTCATACCGGATTCCGGAA...GAAGAGGCCAGGGAGTATTTTGAGGACAACACTCTCACGGAGCGCTTTTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR-3UTR GCA 90 bp GAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGCCGGGGCTGCTGTCAGGTCATATCTaGCCATACACAAGATGGCAC +
Preference number: 2 (lower is better)
Translates to: EGAVRSYLPIHKMAQPGLLSGHI*PYTRWH
Trigger: GTGCCATCTTGTGTATGGGCAGATATGACCTGACAG...CAGCCCCGGCTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR CCA 90 bp GGTTTTTATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCAATGCGAGCCAGCTCCAGGTCCCAGTaGTTGGCTCTTGGAATCCGG +
Preference number: 2 (lower is better)
Translates to: GFYLGEQLNSSSLGAMRASSRSQ*LALGIR
Trigger: CCGGATTCCAAGAGCCAACCACTGGGACCTGGAGCT...GGCTCGCATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATAAAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR-3UTR GCA 90 bp GTGGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGGACACGGGAACACGTTaGCGAAAACATGTGTATATC +
Preference number: 2 (lower is better)
Translates to: VALEGAVRSYLPIHKMAQDTGTR*RKHVYI
Trigger: GATATACACATGTTTTCGGCAACGTGTTCCCGTGTC...CTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR GCA 72 bp CGCGCGTCTGCCTACCACGGGGGCGGAACTGACCAGTaGCCTCACGGTCAGGAGAGTGTGGGGGCCCGTGAG +
Preference number: 3 (lower is better)
Translates to: RASAYHGGGTDQ*PHGQESVGARE
Trigger: CTCACGGGCCCCCACACTCTCCTGACCGTGAGGGCACTGGTCAGTTCCGCCCCCGTGGTAGGCAGACGCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR GCA 72 bp CGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTaGGTACCCTGTGGCACTGGAGGGGGCTGTCAGGTC +
Preference number: 3 (lower is better)
Translates to: RRHACAQAGLCV*VPCGTGGGCQV
Trigger: GACCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR GCA 72 bp CCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGTaGACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGG +
Preference number: 3 (lower is better)
Translates to: PVPHGECTKTRV*TGGALRVRTLW
Trigger: CCACAGGGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR CCA 72 bp GCGGAACTGACCAGTGCCCTCACGGTCAGGAGAGTGTaGGGGCCCGTGAGGGGCCAGGACACGGGAACACGT +
Preference number: 3 (lower is better)
Translates to: AELTSALTVRRV*GPVRGQDTGTR
Trigger: ACGTGTTCCCGTGTCCTGGCCCCTCACGGGCCCCCACACTCTCCTGACCGTGAGGGCACTGGTCAGTTCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR GCA 72 bp AGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTaGGTGTGCGTACCCTGTGGCACTGGAGGGGGCTGT +
Preference number: 3 (lower is better)
Translates to: SARRHACAQAGL*VCVPCGTGGGC
Trigger: ACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR CCA 72 bp GTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCCTGTaGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCA +
Preference number: 3 (lower is better)
Translates to: VCTGGALRVRTL*HWRGLSGHICP
Trigger: TGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGCACAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR CAA 90 bp AGTGCCCCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGCCCAGTGGTTGGCTCTaGGAATCCGGGTATGGCTAC +
Preference number: 3 (lower is better)
Translates to: SAPVPHGECTKTRVCTGGPSGWL*ESGYGY
Trigger: GTAGCCATACCCGGATTCCAAGAGCCAACCACTGGG...CCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGGGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR-3UTR CAA 90 bp GCGTGTGCGTACCCTGTGGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATAAATGAGCCCGGCCTCTaGGGGACAGGGCTGCTGGCC +
Preference number: 3 (lower is better)
Translates to: ACAYPVALEGAVRSYLPINEPGL*GTGLLA
Trigger: GGCCAGCAGCCCTGTCCCCAAGAGGCCGGGCTCATT...TATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR TCA 72 bp GCAGATACCAAAAGGCTCCCAGGCCGGCCAGGACAATaGGCAGGATGCCACCTGTCAGCCCCACAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: ADTKRLPGRPGQ*AGCHLSAPQPG
Trigger: GCCTGGCTGTGGGGCTGACAGGTGGCATCCTGCTCATTGTCCTGGCCGGCCTGGGAGCCTTTTGGTATCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR CCA 72 bp CATATCTGCCCATACACAAGATGGCACAGCCGGGGCTaGGCTCCTGGGTCCGAATTTCCCCGCGCGTCTGCC +
Preference number: 3 (lower is better)
Translates to: HICPYTRWHSRG*APGSEFPRASA
Trigger: GGCAGACGCGCGGGGAAATTCGGACCCAGGAGCCCAGCCCCGGCTGTGCCATCTTGTGTATGGGCAGATATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR TCA 72 bp GCGTCTATGAGGCCTAGCGGCTTCCGGAATCCGGTATaGATCAGGGGCACGGTTCGGAGAGCCGGGTCTCGA +
Preference number: 3 (lower is better)
Translates to: ASMRPSGFRNPV*IRGTVRRAGSR
Trigger: TCGAGACCCGGCTCTCCGAACCGTGCCCCTGATTCATACCGGATTCCGGAAGCCGCTAGGCCTCATAGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR GCA 72 bp ACCCTGTGGCACTGGAGGGGGCTGTCAGGTCATATCTaGCCATACACAAGATGGCACAGCCGGGGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: TLWHWRGLSGHI*PYTRWHSRGWA
Trigger: AGCCCAGCCCCGGCTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCACAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR CCA 72 bp ACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGGCACTaGAGGGGGCTGTCAGGTCATATCTGCCCATACACA +
Preference number: 3 (lower is better)
Translates to: TGGALRVRTLWH*RGLSGHICPYT
Trigger: TGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR CAA 90 bp CACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGGCACTGGAGGGGGCTGTCAGGGGACACGGGAACACGTaGCCGAAAACATGTGTATAT +
Preference number: 3 (lower is better)
Translates to: HRRGSACAYPVALEGAVRGHGNT*PKTCVY
Trigger: ATATACACATGTTTTCGGCAACGTGTTCCCGTGTCC...CCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR GCA 72 bp TTATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTaGAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCA +
Preference number: 3 (lower is better)
Translates to: LFRGTAQLQLPG*NASLPAPSALA
Trigger: TGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR-3UTR CAA 90 bp GGGTGGAGGTGCGTCGTGTACCCCAGAGGCTGCCAGCGCCTGCTCATAGGTGGGGGACACGGGAACACGTaGCCGAAAACATGTGTATAT +
Preference number: 3 (lower is better)
Translates to: GWRCVVYPRGCQRLLIGGGHGNT*PKTCVY
Trigger: ATATACACATGTTTTCGGCAACGTGTTCCCGTGTCC...CCCACCTATGAGCAGGCGCTGGCAGCCTCTGGGGTACACGACGCACCTCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR CCA 72 bp AGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATaGCACAGCCGGGGCTGGGCTCCTGGGTCCGAATTT +
Preference number: 3 (lower is better)
Translates to: RGLSGHICPYTR*HSRGWAPGSEF
Trigger: AAATTCGGACCCAGGAGCCCAGCCCCGGCTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
3UTR TCA 72 bp TCTCTTCCAGACACTCCCGTTCCAGGTTCCCTGGTGTaGGCAGCTCCAGGTCCCAGTGGTTGGCTCTTGGAA +
Preference number: 3 (lower is better)
Translates to: SLPDTPVPGSLV*AAPGPSGWLLE
Trigger: TTCCAAGAGCCAACCACTGGGACCTGGAGCTGCTCACACCAGGGAACCTGGAACGGGAGTGTCTGGAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR-3UTR CAA 90 bp CCCTGTGGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCCGCTCCGTGAGAGTGTaGTCCTCAAAATACTCCCTG +
Preference number: 3 (lower is better)
Translates to: PCGTGGGCQVISAHTQDGRSVRV*SSKYSL
Trigger: CAGGGAGTATTTTGAGGACAACACTCTCACGGAGCG...GCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCACAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597121.5
3UTR-3UTR CAA 90 bp CTTTCCGAAGGGTTTTTATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCTCCAGGTCCCAGTGGTaGGCTCTTGGAATCCGGGTA +
Preference number: 3 (lower is better)
Translates to: LSEGFLFRGTAQLQLPGCSRSQW*ALGIRV
Trigger: TACCCGGATTCCAAGAGCCAACCACTGGGACCTGGA...GCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATAAAAACCCTTCGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR GCA 90 bp GCCGGGGCTGGGCTCCTGGGTCCGAATTTCCCCGCGCGTCTGCCTACCACGGGGGCACAGGCGGGGCTCTaGGTGTGCGTACCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AGAGLLGPNFPARLPTTGAQAGL*VCVPCG
Trigger: GCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGC...CCCCGTGGTAGGCAGACGCGCGGGGAAATTCGGACCCAGGAGCCCAGCCCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR TCA 90 bp CACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGGCACTGGAGGGGGCTGTCAGGGAGTGTGGGGGCCCGTaGGGGGCCAGGACACGGGAA +
Preference number: 4 (lower is better)
Translates to: HRRGSACAYPVALEGAVRECGGP*GARTRE
Trigger: TTCCCGTGTCCTGGCCCCTCACGGGCCCCCACACTC...CCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp TGGCCTCGGTGCTGTCGCCAGCGCAGATACCAAAAGGCTCCCAGGCCGGCCAGGCGGCGGAAACGCGTGTaGCAGGGCAGGCCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: WPRCCRQRRYQKAPRPARRRKRV*QGRPRA
Trigger: GGCCCGAGGCCTGCCCTGGCACACGCGTTTCCGCCG...CCTGGCCGGCCTGGGAGCCTTTTGGTATCTGCGCTGGCGACAGCACCGAGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR TCA 90 bp GTGGGGGTGGAGGCAGGGGCGTCGGTGGGCCCAGAGGGTTCAAAGGACTCAGAGCCACGGGGGCGGAACTaGCCAGTGCCCTCACGGTCA +
Preference number: 4 (lower is better)
Translates to: VGVEAGASVGPEGSKDSEPRGRN*PVPSRS
Trigger: TGACCGTGAGGGCACTGGTCAGTTCCGCCCCCGTGG...CTCTGAGTCCTTTGAACCCTCTGGGCCCACCGACGCCCCTGCCTCCACCCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR GCA 90 bp GCACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGGCACTGGAGGGGGCTGTCAGTCTTGGGGACAGGGCTaGTGGCCTCGGTGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: AQAGLCVCVPCGTGGGCQSWGQG*WPRCCR
Trigger: GCGACAGCACCGAGGCCAGCAGCCCTGTCCCCAAGA...CTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp GCCGGGGCTGGGCTCCTGGGTCCGAATTTCCCCGCGCGTCTGCCTACCACGGGGGTGTACCCCAGAGGCTaGCAGCGCCTGCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: AGAGLLGPNFPARLPTTGVYPRG*QRLLIG
Trigger: ACCTATGAGCAGGCGCTGGCAGCCTCTGGGGTACAC...CCCCGTGGTAGGCAGACGCGCGGGGAAATTCGGACCCAGGAGCCCAGCCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp TACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGGGTGCAATGCGAGCCTaGCCGCACCGAGCGCGCTTG +
Preference number: 4 (lower is better)
Translates to: YRTGSARRHACAQAGLCVGAMRA*PHRARL
Trigger: CAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACC...CACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp CGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACGCTCCCTGGGTGCAATaGGAGCCTGCCCGCACCGAG +
Preference number: 4 (lower is better)
Translates to: RGVHEDTRVHRRGSACAYAPWVQ*EPARTE
Trigger: CTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGC...GTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp ACGGGGGCGGAACTGACCAGTGCCCTCACGGTCAGGAGAGTGTGGGGGCCCGTGCTCCAGCTCCCTGGGTaGAATGCGAGCCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: TGAELTSALTVRRVWGPVLQLPG*NASLPA
Trigger: TGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAG...CACGGGCCCCCACACTCTCCTGACCGTGAGGGCACTGGTCAGTTCCGCCCCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp ACCACGGGGGCGGAACTGACCAGTGCCCTCACGGTCAGGAGAGTGTGGGGGCCCAGGCAGGGGCGTCGGTaGGCCCAGAGGGTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: TTGAELTSALTVRRVWGPRQGRR*AQRVQR
Trigger: CCTTTGAACCCTCTGGGCCCACCGACGCCCCTGCCT...GGGCCCCCACACTCTCCTGACCGTGAGGGCACTGGTCAGTTCCGCCCCCGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp TACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGGGCTGCTGGCCTCGGTaGTGTCGCCAGCGCAGATAC +
Preference number: 4 (lower is better)
Translates to: YRTGSARRHACAQAGLCVGCWPR*CRQRRY
Trigger: GTATCTGCGCTGGCGACAGCACCGAGGCCAGCAGCC...CACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp CAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCATCTTGGGGACAGGGCTaGTGGCCTCGGTGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: QLQLPGCNASLPAPSALASWGQG*WPRCCR
Trigger: GCGACAGCACCGAGGCCAGCAGCCCTGTCCCCAAGA...TGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp CCGAATTTCCCCGCGCGTCTGCCTACCACGGGGGCGGAACTGACCAGTGCCCTCGCGGGGCTCTGCGTGTaGGTACCCTGTGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: PNFPARLPTTGAELTSALAGLCV*VPCGTG
Trigger: TCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGC...GAGGGCACTGGTCAGTTCCGCCCCCGTGGTAGGCAGACGCGCGGGGAAATTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp ACGGGGGCGGAACTGACCAGTGCCCTCACGGTCAGGAGAGTGTGGGGGCCCGTGGTACCGCACGGGGAGTaGACGAAGACACGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: TGAELTSALTVRRVWGPVVPHGE*TKTRVC
Trigger: GCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTAC...CACGGGCCCCCACACTCTCCTGACCGTGAGGGCACTGGTCAGTTCCGCCCCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp GCAGGCCTCGGGCCGGATGACCCCTACTCCCACCATTCCCCACTCCAAGTCCAGGCTCCCTGGGTGCAATaGGAGCCTGCCCGCACCGAG +
Preference number: 4 (lower is better)
Translates to: AGLGPDDPYSHHSPLQVQAPWVQ*EPARTE
Trigger: CTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGC...CTGGACTTGGAGTGGGGAATGGTGGGAGTAGGGGTCATCCGGCCCGAGGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp GAAGTGCCCCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGTGGGGACAGGGCTGCTaGCCTCGGTGCTGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: EVPLYRTGSARRHACAQAWGQGC*PRCCRQ
Trigger: CTGGCGACAGCACCGAGGCCAGCAGCCCTGTCCCCA...CGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGGGGCACTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp GCTCCCAGGCCGGCCAGGACAATGAGCAGGATGCCACCTGTCAGCCCCACAGCCATGAGCCCGGCCTCTTaGGGACAGGGCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: APRPARTMSRMPPVSPTAMSPAS*GQGCWP
Trigger: AGGCCAGCAGCCCTGTCCCCAAGAGGCCGGGCTCAT...GGCTGTGGGGCTGACAGGTGGCATCCTGCTCATTGTCCTGGCCGGCCTGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR CCA 90 bp GGAACAGCTCAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCACGGTCAGGAGAGTGTaGGGGCCCGTGAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GTAQLQLPGCNASLPAPSTVRRV*GPVRGQ
Trigger: CTGGCCCCTCACGGGCCCCCACACTCTCCTGACCGT...GCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp ACGAAGTGCCCCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCCGGGGCTGGGCTCCTaGGTCCGAATTTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: TKCPCTARGVHEDTRVHRPGLGS*VRISPR
Trigger: GCGCGGGGAAATTCGGACCCAGGAGCCCAGCCCCGG...CCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGGGGCACTTCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp TGGCACAGCCGGGGCTGGGCTCCTGGGTCCGAATTTCCCCGCGCGTCTGCCTACTGGCACAGCCGGGGCTaGGCTCCTGGGTCCGAATTT +
Preference number: 4 (lower is better)
Translates to: WHSRGWAPGSEFPRASAYWHSRG*APGSEF
Trigger: AAATTCGGACCCAGGAGCCCAGCCCCGGCTGTGCCA...GTAGGCAGACGCGCGGGGAAATTCGGACCCAGGAGCCCAGCCCCGGCTGTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR TCA 90 bp AGTGCCCCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGCCCGGTAACCAGGCCTaGTCCCCGTTTCTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SAPVPHGECTKTRVCTGGPGNQA*SPFLAG
Trigger: ACCTGCCAGAAACGGGGATCAGGCCTGGTTACCGGG...CCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGGGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246794.10
CDS-3UTR TCA 90 bp GCTCCCAGGCCGGCCAGGACAATGAGCAGGATGCCACCTGTCAGCCCCACAGCCGGCCGGCCAGGACAATaGGCAGGATGCCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: APRPARTMSRMPPVSPTAGRPGQ*AGCHLS
Trigger: TGACAGGTGGCATCCTGCTCATTGTCCTGGCCGGCC...GGCTGTGGGGCTGACAGGTGGCATCCTGCTCATTGTCCTGGCCGGCCTGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR GCA 90 bp GCACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGGCACTGGAGGGGGCTGTCAGGGCGGAACTGACCAGTaGCCTCACGGTCAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: AQAGLCVCVPCGTGGGCQGGTDQ*PHGQES
Trigger: ACTCTCCTGACCGTGAGGGCACTGGTCAGTTCCGCC...CTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp CACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGGCACTGGAGGGGGCTGTCAGGGAAGCTCTGGGCCTCTaGGGGACCCAGGAAGACTTC +
Preference number: 4 (lower is better)
Translates to: HRRGSACAYPVALEGAVREALGL*GTQEDF
Trigger: GAAGTCTTCCTGGGTCCCCCAGAGGCCCAGAGCTTC...CCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp TACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGCTACTCAGGAAGCTCTaGGCCTCTGGGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: YRTGSARRHACAQAGLCVLLRKL*ASGGPR
Trigger: CCTGGGTCCCCCAGAGGCCCAGAGCTTCCTGAGTAG...CACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp CTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCAAATATGAGCCCGGCCTCTTaGGGACAGGGCTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LQLPGCNASLPAPSALANMSPAS*GQGCWP
Trigger: AGGCCAGCAGCCCTGTCCCCAAGAGGCCGGGCTCAT...ATTTGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp CCTGGGTTACGAAGTGCCCCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGACGGTCAGGAGAGTGTaGGGGCCCGTGAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PGLRSAPVPHGECTKTRVTVRRV*GPVRGQ
Trigger: CTGGCCCCTCACGGGCCCCCACACTCTCCTGACCGT...CACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGGGGCACTTCGTAACCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp TCAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCCGTGTGCGTACCCTGTaGCACTGGAGGGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: STPAPWVQCEPARTERACRVRTL*HWRGLS
Trigger: TGACAGCCCCCTCCAGTGCCACAGGGTACGCACACG...GCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp GGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCCCCCCGCCCTTTCCCTaGGTTACGAAGTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GECTKTRVCTGGALRVRTPPPFP*VTKCPC
Trigger: ACAGGGGCACTTCGTAACCCAGGGAAAGGGCGGGGG...GGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR TCA 90 bp CCCGCCCTTTCCCTGGGTTACGAAGTGCCCCTGTACCGCACGGGGAGTGCACGAGGCCGGCCAGGACAATaGGCAGGATGCCACCTGTCA +
Preference number: 4 (lower is better)
Translates to: PALSLGYEVPLYRTGSARGRPGQ*AGCHLS
Trigger: TGACAGGTGGCATCCTGCTCATTGTCCTGGCCGGCC...TCGTGCACTCCCCGTGCGGTACAGGGGCACTTCGTAACCCAGGGAAAGGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp AGTGCCCCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGGCGGAACTGACCAGTaGCCTCACGGTCAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: SAPVPHGECTKTRVCTGGGGTDQ*PHGQES
Trigger: ACTCTCCTGACCGTGAGGGCACTGGTCAGTTCCGCC...CCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGGGGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp GACAGGGCTGCTGGCCTCGGTGCTGTCGCCAGCGCAGATACCAAAAGGCTCCCAATTTCCCCGCGCGTCTaGCTACCACGGGGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: DRAAGLGAVASADTKRLPISPRV*LPRGRN
Trigger: GTTCCGCCCCCGTGGTAGGCAGACGCGCGGGGAAAT...TGGGAGCCTTTTGGTATCTGCGCTGGCGACAGCACCGAGGCCAGCAGCCCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR GCA 90 bp GAAGTGCCCCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGACGAAGACACGCGTGTaGACAGGCGGGGCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: EVPLYRTGSARRHACAQATKTRV*TGGALR
Trigger: ACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGT...CGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGGGGCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp GAAGTGCCCCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGCCCTGGGTTACGAAGTaGCCCTGTACCGCACGGGGA +
Preference number: 4 (lower is better)
Translates to: EVPLYRTGSARRHACAQAPWVTK*PCTARG
Trigger: TCCCCGTGCGGTACAGGGGCACTTCGTAACCCAGGG...CGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGGGGCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp TTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACGGTGCAATGCGAGCCTaGCCGCACCGAGCGCGCTTG +
Preference number: 4 (lower is better)
Translates to: LGEQLNSSSLGAMRACPHGAMRA*PHRARL
Trigger: CAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACC...GTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp CGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACGAAGCTCTGGGCCTCTaGGGGACCCAGGAAGACTTC +
Preference number: 4 (lower is better)
Translates to: RGVHEDTRVHRRGSACAYEALGL*GTQEDF
Trigger: GAAGTCTTCCTGGGTCCCCCAGAGGCCCAGAGCTTC...GTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp TGGCACAGCCGGGGCTGGGCTCCTGGGTCCGAATTTCCCCGCGCGTCTGCCTACAGCTCCAGGTCCCAGTaGTTGGCTCTTGGAATCCGG +
Preference number: 4 (lower is better)
Translates to: WHSRGWAPGSEFPRASAYSSRSQ*LALGIR
Trigger: CCGGATTCCAAGAGCCAACCACTGGGACCTGGAGCT...GTAGGCAGACGCGCGGGGAAATTCGGACCCAGGAGCCCAGCCCCGGCTGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp AGTGCCCCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGTGCCCATACACAAGATaGCACAGCCGGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SAPVPHGECTKTRVCTGGCPYTR*HSRGWA
Trigger: AGCCCAGCCCCGGCTGTGCCATCTTGTGTATGGGCA...CCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGGGGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp ATGGCACAGCCGGGGCTGGGCTCCTGGGTCCGAATTTCCCCGCGCGTCTGCCTATGCCCATACACAAGATaGCACAGCCGGGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: MAQPGLGSWVRISPRVCLCPYTR*HSRGWA
Trigger: AGCCCAGCCCCGGCTGTGCCATCTTGTGTATGGGCA...TAGGCAGACGCGCGGGGAAATTCGGACCCAGGAGCCCAGCCCCGGCTGTGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp GTGGGGGTGGAGGCAGGGGCGTCGGTGGGCCCAGAGGGTTCAAAGGACTCAGAGAAAGCAGTGGGGTCCTaGAGGAAGGAGCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VGVEAGASVGPEGSKDSEKAVGS*RKEQGL
Trigger: CAGCCCCTGCTCCTTCCTCCAGGACCCCACTGCTTT...CTCTGAGTCCTTTGAACCCTCTGGGCCCACCGACGCCCCTGCCTCCACCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR CCA 90 bp ATGGCACAGCCGGGGCTGGGCTCCTGGGTCCGAATTTCCCCGCGCGTCTGCCTAGGGGATGGAAAGCAGTaGGGTCCTGGAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: MAQPGLGSWVRISPRVCLGDGKQ*GPGGRS
Trigger: GCTCCTTCCTCCAGGACCCCACTGCTTTCCATCCCC...TAGGCAGACGCGCGGGGAAATTCGGACCCAGGAGCCCAGCCCCGGCTGTGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR CCA 90 bp CACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGGCACTGGAGGGGGAGTCATAGGGGGATaGAAAGCAGTGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: HACAQAGLCVCVPCGTGGGVIGG*KAVGSW
Trigger: CCAGGACCCCACTGCTTTCCATCCCCCTATGACTCC...CCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR TCA 90 bp GCACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGGCACTGGAGGGGGCTGTCAGACCTGCCCAGAAATGTaGGCACTGCCCCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: AQAGLCVCVPCGTGGGCQTCPEM*ALPLPL
Trigger: AAGAGGAAGGGGCAGTGCTCACATTTCTGGGCAGGT...CTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR TCA 90 bp CAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCAAAAGCAGCTCTTCAGTaGGGCCTCCTGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QLQLPGCNASLPAPSALAKAALQ*GLLRLV
Trigger: CACCAGCCTCAGGAGGCCTCACTGAAGAGCTGCTTT...TGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR TCA 90 bp ACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTTTCCGGAATCCGGTATaGATCAGGGGCACGGTTCGG +
Preference number: 4 (lower is better)
Translates to: TARGVHEDTRVHRRGSACFRNPV*IRGTVR
Trigger: CCGAACCGTGCCCCTGATTCATACCGGATTCCGGAA...ACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp CACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGGCACTGGAGGGCCAGGTCCCAGTGGTTaGCTCTTGGAATCCGGGTAT +
Preference number: 4 (lower is better)
Translates to: HACAQAGLCVCVPCGTGGPGPSG*LLESGY
Trigger: ATACCCGGATTCCAAGAGCCAACCACTGGGACCTGG...CCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR TCA 90 bp GTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGTTCCGGAATCCGGTATaGATCAGGGGCACGGTTCGG +
Preference number: 4 (lower is better)
Translates to: VHEDTRVHRRGSACAYPVFRNPV*IRGTVR
Trigger: CCGAACCGTGCCCCTGATTCATACCGGATTCCGGAA...CACAGGGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR TCA 90 bp CCCTGTGGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCCCACGGGGGCGGAACTaGCCAGTGCCCTCACGGTCA +
Preference number: 4 (lower is better)
Translates to: PCGTGGGCQVISAHTQDGPRGRN*PVPSRS
Trigger: TGACCGTGAGGGCACTGGTCAGTTCCGCCCCCGTGG...GCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp TTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCCCTGGGTTACGAAGTaGCCCTGTACCGCACGGGGA +
Preference number: 4 (lower is better)
Translates to: LGEQLNSSSLGAMRACPHPWVTK*PCTARG
Trigger: TCCCCGTGCGGTACAGGGGCACTTCGTAACCCAGGG...GTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp CCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCAAATATCCGTTCCAGGTTCCCTaGTGTGAGCAGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PAPWVQCEPARTERACKYPFQVP*CEQLQV
Trigger: GACCTGGAGCTGCTCACACCAGGGAACCTGGAACGG...ATATTTGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp TTCCCCACTCCAAGTCCAGCTTCGGCGTCTATGAGGCCTAGCGGCTTCCGGAATTGGGGACAGGGCTGCTaGCCTCGGTGCTGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: FPTPSPASASMRPSGFRNWGQGC*PRCCRQ
Trigger: CTGGCGACAGCACCGAGGCCAGCAGCCCTGTCCCCA...ATTCCGGAAGCCGCTAGGCCTCATAGACGCCGAAGCTGGACTTGGAGTGGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp GTGGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGCCGGGGCTGGGCTCCTaGGTCCGAATTTCCCCGCGC +
Preference number: 4 (lower is better)
Translates to: VALEGAVRSYLPIHKMAQPGLGS*VRISPR
Trigger: GCGCGGGGAAATTCGGACCCAGGAGCCCAGCCCCGG...CTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp GGGCTCTGCGTGTGCGTACCCTGTGGCACTGGAGGGGGCTGTCAGGTCATATCTTGGCACAGCCGGGGCTaGGCTCCTGGGTCCGAATTT +
Preference number: 4 (lower is better)
Translates to: GLCVCVPCGTGGGCQVISWHSRG*APGSEF
Trigger: AAATTCGGACCCAGGAGCCCAGCCCCGGCTGTGCCA...AGATATGACCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp CCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCAAATATCGTACCCTGTGGCACTaGAGGGGGCTGTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: PAPWVQCEPARTERACKYRTLWH*RGLSGH
Trigger: ATGACCTGACAGCCCCCTCCAGTGCCACAGGGTACG...ATATTTGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR TCA 90 bp TTCCCCACTCCAAGTCCAGCTTCGGCGTCTATGAGGCCTAGCGGCTTCCGGAATAGGCCTCGGGCCGGATaGCCCCTACTCCCACCATTC +
Preference number: 4 (lower is better)
Translates to: FPTPSPASASMRPSGFRNRPRAG*PLLPPF
Trigger: GAATGGTGGGAGTAGGGGTCATCCGGCCCGAGGCCT...ATTCCGGAAGCCGCTAGGCCTCATAGACGCCGAAGCTGGACTTGGAGTGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp CGCGCGTCTGCCTACCACGGGGGCGGAACTGACCAGTGCCCTCACGGTCAGGAGGTCCACGCCCTCCTTTaGCATTGTAGATGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: RASAYHGGGTDQCPHGQEVHALL*HCRCSS
Trigger: AGAGCTACATCTACAATGGCAAAGGAGGGCGTGGAC...CTCCTGACCGTGAGGGCACTGGTCAGTTCCGCCCCCGTGGTAGGCAGACGCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp ACGGGGGCGGAACTGACCAGTGCCCTCACGGTCAGGAGAGTGTGGGGGCCCGTGGTCCACGCCCTCCTTTaGCATTGTAGATGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: TGAELTSALTVRRVWGPVVHALL*HCRCSS
Trigger: AGAGCTACATCTACAATGGCAAAGGAGGGCGTGGAC...CACGGGCCCCCACACTCTCCTGACCGTGAGGGCACTGGTCAGTTCCGCCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp GTGGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGGCACAGGCGGGGCTCTaGGTGTGCGTACCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VALEGAVRSYLPIHKMAQAQAGL*VCVPCG
Trigger: GCCACAGGGTACGCACACGCAGAGCCCCGCCTGTGC...CTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp GAACACCTCTCTTCCAGACACTCCCGTTCCAGGTTCCCTGGTGTGAGCAGCTCCCTCCAGCTCCCTGGGTaGAATGCGAGCCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: EHLSSRHSRSRFPGVSSSLQLPG*NASLPA
Trigger: TGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAG...GGAGCTGCTCACACCAGGGAACCTGGAACGGGAGTGTCTGGAAGAGAGGTGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR CCA 90 bp TTCCCCACTCCAAGTCCAGCTTCGGCGTCTATGAGGCCTAGCGGCTTCCGGAATAGGCAGGGGCGTCGGTaGGCCCAGAGGGTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: FPTPSPASASMRPSGFRNRQGRR*AQRVQR
Trigger: CCTTTGAACCCTCTGGGCCCACCGACGCCCCTGCCT...ATTCCGGAAGCCGCTAGGCCTCATAGACGCCGAAGCTGGACTTGGAGTGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp CTGTCGCCAGCGCAGATACCAAAAGGCTCCCAGGCCGGCCAGGACAATGAGCAGGAAGGAGGAAGGGGCTaGGTCCTGGACTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LSPAQIPKGSQAGQDNEQEGGRG*VLDSWK
Trigger: CTTCCAGGAGTCCAGGACCCAGCCCCTTCCTCCTTC...CTGCTCATTGTCCTGGCCGGCCTGGGAGCCTTTTGGTATCTGCGCTGGCGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR TCA 90 bp CGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCCCAAAAGCGCTCCGTaGGAGTGTTGTCCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: RGVHEDTRVHRRGSACAYPKSAP*ECCPQN
Trigger: ATTTTGAGGACAACACTCTCACGGAGCGCTTTTGGG...GTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR TCA 90 bp ACCCTGTGGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGAGGCCTCGGGCCGGATaGCCCCTACTCCCACCATTC +
Preference number: 4 (lower is better)
Translates to: TLWHWRGLSGHICPYTRWRPRAG*PLLPPF
Trigger: GAATGGTGGGAGTAGGGGTCATCCGGCCCGAGGCCT...CCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCACAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp TTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCAGTGTACCCCAGAGGCTaGCAGCGCCTGCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: FRGTAQLQLPGCNASLPAVYPRG*QRLLIG
Trigger: ACCTATGAGCAGGCGCTGGCAGCCTCTGGGGTACAC...TGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp CTTTCCGAAGGGTTTTTATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCCGGCGGAAACGCGTGTaGCAGGGCAGGCCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: LSEGFLFRGTAQLQLPGCRRKRV*QGRPRA
Trigger: GGCCCGAGGCCTGCCCTGGCACACGCGTTTCCGCCG...GCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATAAAAACCCTTCGGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp TATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGACGAAGACACGCGTGTaGACAGGCGGGGCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: YLGEQLNSSSLGAMRACPTKTRV*TGGALR
Trigger: ACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGT...CGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp TCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCAAATAGGTCTGTCTCCTCACTaGGTGAAGTATCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SSSLGAMRACPHRARLQIGLSPH*VKYPGR
Trigger: CCTGCCTGGATACTTCACCCAGTGAGGAGACAGACC...TATTTGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp TTCCCCACTCCAAGTCCAGCTTCGGCGTCTATGAGGCCTAGCGGCTTCCGGAATCTACTCAGGAAGCTCTaGGCCTCTGGGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: FPTPSPASASMRPSGFRNLLRKL*ASGGPR
Trigger: CCTGGGTCCCCCAGAGGCCCAGAGCTTCCTGAGTAG...ATTCCGGAAGCCGCTAGGCCTCATAGACGCCGAAGCTGGACTTGGAGTGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp CAGGCCGGCCAGGACAATGAGCAGGATGCCACCTGTCAGCCCCACAGCCAGGCTCCAGTGGTTGGCTCTTaGAATCCGGGTATGGCTACT +
Preference number: 4 (lower is better)
Translates to: QAGQDNEQDATCQPHSQAPVVGS*NPGMAT
Trigger: AGTAGCCATACCCGGATTCCAAGAGCCAACCACTGG...AGCCTGGCTGTGGGGCTGACAGGTGGCATCCTGCTCATTGTCCTGGCCGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR GCA 90 bp GTTGCCGAAAACATGTGTATATCCATACGCGGCGGAAACGCGTGTGCCAGGGCAATTTCCCCGCGCGTCTaGCTACCACGGGGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: VAENMCISIRGGNACARAISPRV*LPRGRN
Trigger: GTTCCGCCCCCGTGGTAGGCAGACGCGCGGGGAAAT...TGCCCTGGCACACGCGTTTCCGCCGCGTATGGATATACACATGTTTTCGGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp GCTCCCAGGCCGGCCAGGACAATGAGCAGGATGCCACCTGTCAGCCCCACAGCCCTGTCAGGTCATATCTaGCCATACACAAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: APRPARTMSRMPPVSPTALSGHI*PYTRWH
Trigger: GTGCCATCTTGTGTATGGGCAGATATGACCTGACAG...GGCTGTGGGGCTGACAGGTGGCATCCTGCTCATTGTCCTGGCCGGCCTGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR CCA 90 bp CCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCAAATATCCAGTGGTTGGCTCTTaGAATCCGGGTATGGCTACT +
Preference number: 4 (lower is better)
Translates to: PAPWVQCEPARTERACKYPVVGS*NPGMAT
Trigger: AGTAGCCATACCCGGATTCCAAGAGCCAACCACTGG...ATATTTGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp GTGGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGCGTGTGCGTACCCTGTaGCACTGGAGGGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: VALEGAVRSYLPIHKMAQRVRTL*HWRGLS
Trigger: TGACAGCCCCCTCCAGTGCCACAGGGTACGCACACG...CTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp GAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGCCGGGGCTGGGAAGGAGCAGGGGCTaGGAATCCAGATTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: EGAVRSYLPIHKMAQPGLGRSRG*ESRFLG
Trigger: ACCCAGGAATCTGGATTCCCAGCCCCTGCTCCTTCC...CAGCCCCGGCTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR TCA 90 bp GCGTGTGCGTACCCTGTGGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATAACCTGCCCAGAAATGTaGGCACTGCCCCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ACAYPVALEGAVRSYLPITCPEM*ALPLPL
Trigger: AAGAGGAAGGGGCAGTGCTCACATTTCTGGGCAGGT...TATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR TCA 90 bp GTTGCCGAAAACATGTGTATATCCATACGCGGCGGAAACGCGTGTGCCAGGGCACAGCTTCGGCGTCTATaGGGCCTAGCGGCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: VAENMCISIRGGNACARAQLRRL*GLAASG
Trigger: TCCGGAAGCCGCTAGGCCTCATAGACGCCGAAGCTG...TGCCCTGGCACACGCGTTTCCGCCGCGTATGGATATACACATGTTTTCGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp CTGTCGCCAGCGCAGATACCAAAAGGCTCCCAGGCCGGCCAGGACAATGAGCAGCTTGGAATCCGGGTATaGCTACTCAGGAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSPAQIPKGSQAGQDNEQLGIRV*LLRKLW
Trigger: CCAGAGCTTCCTGAGTAGCCATACCCGGATTCCAAG...CTGCTCATTGTCCTGGCCGGCCTGGGAGCCTTTTGGTATCTGCGCTGGCGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR CCA 90 bp GAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGCCGGGGCTGCCAGGTCCCAGTGGTTaGCTCTTGGAATCCGGGTAT +
Preference number: 4 (lower is better)
Translates to: EGAVRSYLPIHKMAQPGLPGPSG*LLESGY
Trigger: ATACCCGGATTCCAAGAGCCAACCACTGGGACCTGG...CAGCCCCGGCTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp ACCCTGTGGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCCGTTCCAGGTTCCCTaGTGTGAGCAGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: TLWHWRGLSGHICPYTRWPFQVP*CEQLQV
Trigger: GACCTGGAGCTGCTCACACCAGGGAACCTGGAACGG...CCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCACAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp CCCGTGAGGGGCCAGGACACGGGAACACGTTGCCGAAAACATGTGTATATCCATCCCCCGCCCTTTCCCTaGGTTACGAAGTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: PVRGQDTGTRCRKHVYIHPPPFP*VTKCPC
Trigger: ACAGGGGCACTTCGTAACCCAGGGAAAGGGCGGGGG...ATGGATATACACATGTTTTCGGCAACGTGTTCCCGTGTCCTGGCCCCTCACGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR TCA 90 bp GTGGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGAAAGCAGCTCTTCAGTaGGGCCTCCTGAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VALEGAVRSYLPIHKMAQKAALQ*GLLRLV
Trigger: CACCAGCCTCAGGAGGCCTCACTGAAGAGCTGCTTT...CTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp AACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCAAGACACGGGAACACGTTaGCGAAAACATGTGTATATC +
Preference number: 4 (lower is better)
Translates to: NSSSLGAMRACPHRARLQDTGTR*RKHVYI
Trigger: GATATACACATGTTTTCGGCAACGTGTTCCCGTGTC...TTGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp CCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCACCGAGCGCGCTTGCAAATATCTGTCAGGTCATATCTaGCCATACACAAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: PAPWVQCEPARTERACKYLSGHI*PYTRWH
Trigger: GTGCCATCTTGTGTATGGGCAGATATGACCTGACAG...ATATTTGCAAGCGCGCTCGGTGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp TCGTCCACGCCCTCCTTTGCCATTGTAGATGTAGCTCTCCCAAAAGCGCTCCGTTCAACTCCAGCTCCCTaGGTGCAATGCGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSTPSFAIVDVALPKALRSTPAP*VQCEPA
Trigger: GGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGA...ACGGAGCGCTTTTGGGAGAGCTACATCTACAATGGCAAAGGAGGGCGTGGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR CCA 90 bp GTTGCCGAAAACATGTGTATATCCATACGCGGCGGAAACGCGTGTGCCAGGGCAGAAGGGGCTGGGTCCTaGACTCCTGGAAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VAENMCISIRGGNACARAEGAGS*TPGRGR
Trigger: CCTTCCTCTTCCAGGAGTCCAGGACCCAGCCCCTTC...TGCCCTGGCACACGCGTTTCCGCCGCGTATGGATATACACATGTTTTCGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR TCA 90 bp CTTTCCGAAGGGTTTTTATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCCAGCTTCGGCGTCTATaGGGCCTAGCGGCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: LSEGFLFRGTAQLQLPGCQLRRL*GLAASG
Trigger: TCCGGAAGCCGCTAGGCCTCATAGACGCCGAAGCTG...GCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATAAAAACCCTTCGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp TCCTTTCCGAAGGGTTTTTATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCGGGGCTCTGCGTGTaGGTACCCTGTGGCACTGGA +
Preference number: 4 (lower is better)
Translates to: SFPKGFYLGEQLNSSSLGAGLCV*VPCGTG
Trigger: TCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGC...ACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATAAAAACCCTTCGGAAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp GGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCAAGTATCCAGGCAGGTaGTTAATGCCATATATAGCA +
Preference number: 4 (lower is better)
Translates to: GECTKTRVCTGGALRVRTKYPGR*LMPYIA
Trigger: TGCTATATATGGCATTAACCACCTGCCTGGATACTT...GGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp CTCCCAAAAGCGCTCCGTGAGAGTGTTGTCCTCAAAATACTCCCTGGCCTCTTCCGTACCCTGTGGCACTaGAGGGGGCTGTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LPKALRESVVLKILPGLFRTLWH*RGLSGH
Trigger: ATGACCTGACAGCCCCCTCCAGTGCCACAGGGTACG...GAAGAGGCCAGGGAGTATTTTGAGGACAACACTCTCACGGAGCGCTTTTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR CCA 90 bp GGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGCCGGAAGAGGAAGGACTTaGTCTGTCTCCTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: GTGGGCQVISAHTQDGTAGRGRT*SVSSLG
Trigger: ACCCAGTGAGGAGACAGACCAAGTCCTTCCTCTTCC...GGCTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR CCA 90 bp GTGGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGTGGGTCCTGGACTCCTaGAAGAGGAAGGACTTGGTC +
Preference number: 4 (lower is better)
Translates to: VALEGAVRSYLPIHKMAQWVLDS*KRKDLV
Trigger: GACCAAGTCCTTCCTCTTCCAGGAGTCCAGGACCCA...CTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR CCA 90 bp CCGAAGGGTTTTTATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCAATGTCAACTCCAGCTCCCTaGGTGCAATGCGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PKGFYLGEQLNSSSLGAMSTPAP*VQCEPA
Trigger: GGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGA...CATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATAAAAACCCTTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR TCA 90 bp GTGGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGCCCAAAAGCGCTCCGTaGGAGTGTTGTCCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: VALEGAVRSYLPIHKMAQPKSAP*ECCPQN
Trigger: ATTTTGAGGACAACACTCTCACGGAGCGCTTTTGGG...CTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp TTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCAATGCGAGCCTGCCCGCAGACACGGGAACACGTTaGCGAAAACATGTGTATATC +
Preference number: 4 (lower is better)
Translates to: FRGTAQLQLPGCNASLPADTGTR*RKHVYI
Trigger: GATATACACATGTTTTCGGCAACGTGTTCCCGTGTC...TGCGGGCAGGCTCGCATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp ACGAAGTGCCCCTGTACCGCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGAAGTATCCAGGCAGGTaGTTAATGCCATATATAGCA +
Preference number: 4 (lower is better)
Translates to: TKCPCTARGVHEDTRVHRKYPGR*LMPYIA
Trigger: TGCTATATATGGCATTAACCACCTGCCTGGATACTT...CCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGCGGTACAGGGGCACTTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp AGGGGCCAGGACACGGGAACACGTTGCCGAAAACATGTGTATATCCATACGCGGCTTGGAATCCGGGTATaGCTACTCAGGAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RGQDTGTRCRKHVYIHTRLGIRV*LLRKLW
Trigger: CCAGAGCTTCCTGAGTAGCCATACCCGGATTCCAAG...CCGCGTATGGATATACACATGTTTTCGGCAACGTGTTCCCGTGTCCTGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR GCA 90 bp GGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGCCCAGAAATGTGAGCACTaGCCCTTCCTCTTTAATCGA +
Preference number: 4 (lower is better)
Translates to: GTGGGCQVISAHTQDGTAQKCEH*PFLFNR
Trigger: TCGATTAAAGAGGAAGGGGCAGTGCTCACATTTCTG...GGCTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp TCCTTTCCGAAGGGTTTTTATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGGTCTGTCTCCTCACTaGGTGAAGTATCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SFPKGFYLGEQLNSSSLGGLSPH*VKYPGR
Trigger: CCTGCCTGGATACTTCACCCAGTGAGGAGACAGACC...ACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATAAAAACCCTTCGGAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CCA 90 bp CCGAAGGGTTTTTATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCAATGCCCAGGAAGACTTCTTaGTCTGTCTCCTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: PKGFYLGEQLNSSSLGAMPRKTS*SVSSLG
Trigger: ACCCAGTGAGGAGACAGACCAAGAAGTCTTCCTGGG...CATTGCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATAAAAACCCTTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246794.10
CDS-3UTR GCA 90 bp CTTTCCGAAGGGTTTTTATTTAGGGGAACAGCTCAACTCCAGCTCCCTGGGTGCCAGAAATGTGAGCACTaGCCCTTCCTCTTTAATCGA +
Preference number: 4 (lower is better)
Translates to: LSEGFLFRGTAQLQLPGCQKCEH*PFLFNR
Trigger: TCGATTAAAGAGGAAGGGGCAGTGCTCACATTTCTG...GCACCCAGGGAGCTGGAGTTGAGCTGTTCCCCTAAATAAAAACCCTTCGGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CAA 90 bp GGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCAATGAGCCCGGCCTCTaGGGGACAGGGCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GECTKTRVCTGGALRVRTNEPGL*GTGLLA
Trigger: GGCCAGCAGCCCTGTCCCCAAGAGGCCGGGCTCATT...GGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CAA 90 bp CAGGCGGGGCTCTGCGTGTGCGTACCCTGTGGCACTGGAGGGGGCTGTCAGGTCCCCAGTGGTTGGCTCTaGGAATCCGGGTATGGCTAC +
Preference number: 5 (lower is better)
Translates to: QAGLCVCVPCGTGGGCQVPSGWL*ESGYGY
Trigger: GTAGCCATACCCGGATTCCAAGAGCCAACCACTGGG...GACCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCCCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CAA 90 bp CGCGCGTCTGCCTACCACGGGGGCGGAACTGACCAGTGCCCTCACGGTCAGGAGTCCAGGTCCCAGTGGTaGGCTCTTGGAATCCGGGTA +
Preference number: 5 (lower is better)
Translates to: RASAYHGGGTDQCPHGQESRSQW*ALGIRV
Trigger: TACCCGGATTCCAAGAGCCAACCACTGGGACCTGGA...CTCCTGACCGTGAGGGCACTGGTCAGTTCCGCCCCCGTGGTAGGCAGACGCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CAA 90 bp GCACGGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGACCCAGGAAGACTTCTaGGTCTGTCTCCTCACTGGG +
Preference number: 5 (lower is better)
Translates to: ARGVHEDTRVHRRGSACATQEDF*VCLLTG
Trigger: CCCAGTGAGGAGACAGACCAAGAAGTCTTCCTGGGT...CGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246794.10
CDS CCA 90 bp CAGGTTCCCTGGTGTGAGCAGCTCCAGGTCCCAGTGGTTGGCTCTTaGAATCCGGGTATGGCTACTCAGGAAGCTCTGGGCCTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: QVPWCEQLQVPVVGS*NPGMATQEALGLWG
Trigger: CCCCCAGAGGCCCAGAGCTTCCTGAGTAGCCATACCCGGATTCCAAGAGCCAACCACTGGGACCTGGAGCTGCTCACACCAGGGAACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246794.10
ENST00000543867.2
ENST00000596877.5
ENST00000597121.5
CDS-3UTR CAA 90 bp GGGGAGTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCCGCTCCGTGAGAGTGTaGTCCTCAAAATACTCCCTG +
Preference number: 5 (lower is better)
Translates to: GECTKTRVCTGGALRVRTRSVRV*SSKYSL
Trigger: CAGGGAGTATTTTGAGGACAACACTCTCACGGAGCG...GGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCACTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CAA 90 bp GTGCACGAAGACACGCGTGTGCACAGGCGGGGCTCTGCGTGTGCGTACCCTGTGTGGAAGAGGAAGGACTaGGTCTGTCTCCTCACTGGG +
Preference number: 5 (lower is better)
Translates to: VHEDTRVHRRGSACAYPVWKRKD*VCLLTG
Trigger: CCCAGTGAGGAGACAGACCAAGTCCTTCCTCTTCCA...CACAGGGTACGCACACGCAGAGCCCCGCCTGTGCACACGCGTGTCTTCGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS CCA 90 bp GTGAGCAGCTCCAGGTCCCAGTGGTTGGCTCTTGGAATCCGGGTATaGCTACTCAGGAAGCTCTGGGCCTCTGGGGGACCCAGGAAGACT +
Preference number: 5 (lower is better)
Translates to: VSSSRSQWLALGIRV*LLRKLWASGGPRKT
Trigger: AGTCTTCCTGGGTCCCCCAGAGGCCCAGAGCTTCCTGAGTAGCCATACCCGGATTCCAAGAGCCAACCACTGGGACCTGGAGCTGCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000246794.10
ENST00000543867.2
ENST00000596877.5
ENST00000597121.5
CDS-3UTR CAA 90 bp CCCGTGAGGGGCCAGGACACGGGAACACGTTGCCGAAAACATGTGTATATCCATAATGAGCCCGGCCTCTaGGGGACAGGGCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PVRGQDTGTRCRKHVYIHNEPGL*GTGLLA
Trigger: GGCCAGCAGCCCTGTCCCCAAGAGGCCGGGCTCATT...ATGGATATACACATGTTTTCGGCAACGTGTTCCCGTGTCCTGGCCCCTCACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS CCA 90 bp CACTCCCGTTCCAGGTTCCCTGGTGTGAGCAGCTCCAGGTCCCAGTaGTTGGCTCTTGGAATCCGGGTATGGCTACTCAGGAAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: HSRSRFPGVSSSRSQ*LALGIRVWLLRKLW
Trigger: CCAGAGCTTCCTGAGTAGCCATACCCGGATTCCAAGAGCCAACCACTGGGACCTGGAGCTGCTCACACCAGGGAACCTGGAACGGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246794.10
ENST00000543867.2
ENST00000596877.5
ENST00000597121.5
CDS-3UTR CAA 90 bp GAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGCCGGGGCTGCCCAGTGGTTGGCTCTaGGAATCCGGGTATGGCTAC +
Preference number: 5 (lower is better)
Translates to: EGAVRSYLPIHKMAQPGLPSGWL*ESGYGY
Trigger: GTAGCCATACCCGGATTCCAAGAGCCAACCACTGGG...CAGCCCCGGCTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS CCA 90 bp GGCTCTTGGAATCCGGGTATGGCTACTCAGGAAGCTCTGGGCCTCTaGGGGACCCAGGAAGACTTCTGGACCCAAAGACATGAGGGACAG +
Preference number: 5 (lower is better)
Translates to: GSWNPGMATQEALGL*GTQEDFWTQRHEGQ
Trigger: CTGTCCCTCATGTCTTTGGGTCCAGAAGTCTTCCTGGGTCCCCCAGAGGCCCAGAGCTTCCTGAGTAGCCATACCCGGATTCCAAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543867.2
ENST00000597121.5
CDS-3UTR CAA 90 bp GGGCTCTGCGTGTGCGTACCCTGTGGCACTGGAGGGGGCTGTCAGGTCATATCTTTAATCGAGAACTCCTaGGCCAGCTACAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GLCVCVPCGTGGGCQVISLIENS*ASYSQL
Trigger: CAGCTGGCTGTAGCTGGCCAAGGAGTTCTCGATTAA...AGATATGACCTGACAGCCCCCTCCAGTGCCACAGGGTACGCACACGCAGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CAA 90 bp GAACACCTCTCTTCCAGACACTCCCGTTCCAGGTTCCCTGGTGTGAGCAGCTCCTCCAGGTCCCAGTGGTaGGCTCTTGGAATCCGGGTA +
Preference number: 5 (lower is better)
Translates to: EHLSSRHSRSRFPGVSSSSRSQW*ALGIRV
Trigger: TACCCGGATTCCAAGAGCCAACCACTGGGACCTGGA...GGAGCTGCTCACACCAGGGAACCTGGAACGGGAGTGTCTGGAAGAGAGGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR CAA 90 bp CAGGCCGGCCAGGACAATGAGCAGGATGCCACCTGTCAGCCCCACAGCCAGGCTGGACACGGGAACACGTaGCCGAAAACATGTGTATAT +
Preference number: 5 (lower is better)
Translates to: QAGQDNEQDATCQPHSQAGHGNT*PKTCVY
Trigger: ATATACACATGTTTTCGGCAACGTGTTCCCGTGTCC...AGCCTGGCTGTGGGGCTGACAGGTGGCATCCTGCTCATTGTCCTGGCCGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS CCA 90 bp CAGTGGTTGGCTCTTGGAATCCGGGTATGGCTACTCAGGAAGCTCTaGGCCTCTGGGGGACCCAGGAAGACTTCTTGGTCTGTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: QWLALGIRVWLLRKL*ASGGPRKTSWSVSS
Trigger: TGAGGAGACAGACCAAGAAGTCTTCCTGGGTCCCCCAGAGGCCCAGAGCTTCCTGAGTAGCCATACCCGGATTCCAAGAGCCAACCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000596877.5
CDS CCA 90 bp CAGTGGTTGGCTCTTGGAATCCGGGTATGGCTACTCAGGAAGCTCTaGGCCTCTGGGGGACCCAGGAAGACTTCTGGACCCAAAGACATG +
Preference number: 5 (lower is better)
Translates to: QWLALGIRVWLLRKL*ASGGPRKTSGPKDM
Trigger: CATGTCTTTGGGTCCAGAAGTCTTCCTGGGTCCCCCAGAGGCCCAGAGCTTCCTGAGTAGCCATACCCGGATTCCAAGAGCCAACCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543867.2
ENST00000597121.5
CDS GCA 90 bp AGAAACATTCCTGAGTCAGGGGGAGGCCAACGCCAAGTGTCTGGATaGCACTTCCCCCAAACACTCACCTTGGTCTGTCTCCTCACTGGG +
Preference number: 5 (lower is better)
Translates to: RNIPESGGGQRQVSG*HFPQTLTLVCLLTG
Trigger: CCCAGTGAGGAGACAGACCAAGGTGAGTGTTTGGGGGAAGTGGCATCCAGACACTTGGCGTTGGCCTCCCCCTGACTCAGGAATGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543867.2
CDS-3UTR CAA 90 bp GGCACTGGAGGGGGCTGTCAGGTCATATCTGCCCATACACAAGATGGCACAGCCCGCTCCGTGAGAGTGTaGTCCTCAAAATACTCCCTG +
Preference number: 5 (lower is better)
Translates to: GTGGGCQVISAHTQDGTARSVRV*SSKYSL
Trigger: CAGGGAGTATTTTGAGGACAACACTCTCACGGAGCG...GGCTGTGCCATCTTGTGTATGGGCAGATATGACCTGACAGCCCCCTCCAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS CCA 90 bp ACTCACCTTGGTCTGTCTCCTCACTGGGTGAAGTATCCAGGCAGGTaGTTAATGCCATATATAGCAGCAGCAGAGAGGGGTGGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: THLGLSPHWVKYPGR*LMPYIAAAERGGPS
Trigger: TGAGGGGCCACCCCTCTCTGCTGCTGCTATATATGGCATTAACCACCTGCCTGGATACTTCACCCAGTGAGGAGACAGACCAAGGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543867.2
CDS CCA 90 bp GCCAACGCCAAGTGTCTGGATGCCACTTCCCCCAAACACTCACCTTaGTCTGTCTCCTCACTGGGTGAAGTATCCAGGCAGGTGGTTAAT +
Preference number: 5 (lower is better)
Translates to: ANAKCLDATSPKHSP*SVSSLGEVSRQVVN
Trigger: ATTAACCACCTGCCTGGATACTTCACCCAGTGAGGAGACAGACCAAGGTGAGTGTTTGGGGGAAGTGGCATCCAGACACTTGGCGTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543867.2
CDS CCA 90 bp GAAGGACTTGGTCTGTCTCCTCACTGGGTGAAGTATCCAGGCAGGTaGTTAATGCCATATATAGCAGCAGCAGAGAGGGGTGGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: EGLGLSPHWVKYPGR*LMPYIAAAERGGPS
Trigger: TGAGGGGCCACCCCTCTCTGCTGCTGCTATATATGGCATTAACCACCTGCCTGGATACTTCACCCAGTGAGGAGACAGACCAAGTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS-3UTR CAA 90 bp CCCGTGAGGGGCCAGGACACGGGAACACGTTGCCGAAAACATGTGTATATCCATTTAATCGAGAACTCCTaGGCCAGCTACAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PVRGQDTGTRCRKHVYIHLIENS*ASYSQL
Trigger: CAGCTGGCTGTAGCTGGCCAAGGAGTTCTCGATTAA...ATGGATATACACATGTTTTCGGCAACGTGTTCCCGTGTCCTGGCCCCTCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS-3UTR CAA 90 bp TTCCCCACTCCAAGTCCAGCTTCGGCGTCTATGAGGCCTAGCGGCTTCCGGAATGGACACGGGAACACGTaGCCGAAAACATGTGTATAT +
Preference number: 5 (lower is better)
Translates to: FPTPSPASASMRPSGFRNGHGNT*PKTCVY
Trigger: ATATACACATGTTTTCGGCAACGTGTTCCCGTGTCC...ATTCCGGAAGCCGCTAGGCCTCATAGACGCCGAAGCTGGACTTGGAGTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000597121.5
CDS CCA 90 bp AGACTTCTTGGTCTGTCTCCTCACTGGGTGAAGTATCCAGGCAGGTaGTTAATGCCATATATAGCAGCAGCAGAGAGGGGTGGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: RLLGLSPHWVKYPGR*LMPYIAAAERGGPS
Trigger: TGAGGGGCCACCCCTCTCTGCTGCTGCTATATATGGCATTAACCACCTGCCTGGATACTTCACCCAGTGAGGAGACAGACCAAGAAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000596877.5
CDS CCA 90 bp GGTCCTGGACTCCTGGAAGAGGAAGGACTTGGTCTGTCTCCTCACTaGGTGAAGTATCCAGGCAGGTGGTTAATGCCATATATAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GPGLLEEEGLGLSPH*VKYPGRWLMPYIAA
Trigger: TGCTGCTATATATGGCATTAACCACCTGCCTGGATACTTCACCCAGTGAGGAGACAGACCAAGTCCTTCCTCTTCCAGGAGTCCAGGACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS CCA 90 bp TGGATGCCACTTCCCCCAAACACTCACCTTGGTCTGTCTCCTCACTaGGTGAAGTATCCAGGCAGGTGGTTAATGCCATATATAGCAGCA +
Preference number: 5 (lower is better)
Translates to: WMPLPPNTHLGLSPH*VKYPGRWLMPYIAA
Trigger: TGCTGCTATATATGGCATTAACCACCTGCCTGGATACTTCACCCAGTGAGGAGACAGACCAAGGTGAGTGTTTGGGGGAAGTGGCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543867.2
CDS CCA 72 bp TCCAGGTCCCAGTGGTTGGCTCTTGGAATCCGGGTATaGCTACTCAGGAAGCTCTGGGCCTCTGGGGGACCC +
Preference number: 6 (lower is better)
Translates to: SRSQWLALGIRV*LLRKLWASGGP
Trigger: GGGTCCCCCAGAGGCCCAGAGCTTCCTGAGTAGCCATACCCGGATTCCAAGAGCCAACCACTGGGACCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000246794.10
ENST00000543867.2
ENST00000596877.5
ENST00000597121.5
CDS CAA 90 bp TCCCGTTCCAGGTTCCCTGGTGTGAGCAGCTCCAGGTCCCAGTGGTaGGCTCTTGGAATCCGGGTATGGCTACTCAGGAAGCTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SRSRFPGVSSSRSQW*ALGIRVWLLRKLWA
Trigger: GGCCCAGAGCTTCCTGAGTAGCCATACCCGGATTCCAAGAGCCAACCACTGGGACCTGGAGCTGCTCACACCAGGGAACCTGGAACGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246794.10
ENST00000543867.2
ENST00000596877.5
ENST00000597121.5
CDS CCA 72 bp GCTCTTGGAATCCGGGTATGGCTACTCAGGAAGCTCTaGGCCTCTGGGGGACCCAGGAAGACTTCTGGACCC +
Preference number: 6 (lower is better)
Translates to: ALGIRVWLLRKL*ASGGPRKTSGP
Trigger: GGGTCCAGAAGTCTTCCTGGGTCCCCCAGAGGCCCAGAGCTTCCTGAGTAGCCATACCCGGATTCCAAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543867.2
ENST00000597121.5
CDS GCA 72 bp CCTGAGTCAGGGGGAGGCCAACGCCAAGTGTCTGGATaGCACTTCCCCCAAACACTCACCTTGGTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: PESGGGQRQVSG*HFPQTLTLVCL
Trigger: GAGACAGACCAAGGTGAGTGTTTGGGGGAAGTGGCATCCAGACACTTGGCGTTGGCCTCCCCCTGACTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543867.2
CDS CCA 72 bp TGGTGTGAGCAGCTCCAGGTCCCAGTGGTTGGCTCTTaGAATCCGGGTATGGCTACTCAGGAAGCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: WCEQLQVPVVGS*NPGMATQEALG
Trigger: GCCCAGAGCTTCCTGAGTAGCCATACCCGGATTCCAAGAGCCAACCACTGGGACCTGGAGCTGCTCACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246794.10
ENST00000543867.2
ENST00000596877.5
ENST00000597121.5
CDS CCA 72 bp GGGGCTGGGTCCTGGACTCCTGGAAGAGGAAGGACTTaGTCTGTCTCCTCACTGGGTGAAGTATCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: GAGSWTPGRGRT*SVSSLGEVSRQ
Trigger: CTGCCTGGATACTTCACCCAGTGAGGAGACAGACCAAGTCCTTCCTCTTCCAGGAGTCCAGGACCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597121.5
CDS CCA 72 bp AATCCGGGTATGGCTACTCAGGAAGCTCTGGGCCTCTaGGGGACCCAGGAAGACTTCTTGGTCTGTCTCCTC +
Preference number: 6 (lower is better)
Translates to: NPGMATQEALGL*GTQEDFLVCLL
Trigger: GAGGAGACAGACCAAGAAGTCTTCCTGGGTCCCCCAGAGGCCCAGAGCTTCCTGAGTAGCCATACCCGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000596877.5
CDS CCA 72 bp GCTCTTGGAATCCGGGTATGGCTACTCAGGAAGCTCTaGGCCTCTGGGGGACCCAGGAAGACTTCTTGGTCT +
Preference number: 6 (lower is better)
Translates to: ALGIRVWLLRKL*ASGGPRKTSWS
Trigger: AGACCAAGAAGTCTTCCTGGGTCCCCCAGAGGCCCAGAGCTTCCTGAGTAGCCATACCCGGATTCCAAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000596877.5
CDS CAA 72 bp AGGTTCCCTGGTGTGAGCAGCTCCAGGTCCCAGTGGTaGGCTCTTGGAATCCGGGTATGGCTACTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: RFPGVSSSRSQW*ALGIRVWLLRK
Trigger: CTTCCTGAGTAGCCATACCCGGATTCCAAGAGCCAACCACTGGGACCTGGAGCTGCTCACACCAGGGAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246794.10
ENST00000543867.2
ENST00000596877.5
ENST00000597121.5
CDS CCA 72 bp AATCCGGGTATGGCTACTCAGGAAGCTCTGGGCCTCTaGGGGACCCAGGAAGACTTCTGGACCCAAAGACAT +
Preference number: 6 (lower is better)
Translates to: NPGMATQEALGL*GTQEDFWTQRH
Trigger: ATGTCTTTGGGTCCAGAAGTCTTCCTGGGTCCCCCAGAGGCCCAGAGCTTCCTGAGTAGCCATACCCGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543867.2
ENST00000597121.5
CDS CCA 72 bp AAGTGTCTGGATGCCACTTCCCCCAAACACTCACCTTaGTCTGTCTCCTCACTGGGTGAAGTATCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: KCLDATSPKHSP*SVSSLGEVSRQ
Trigger: CTGCCTGGATACTTCACCCAGTGAGGAGACAGACCAAGGTGAGTGTTTGGGGGAAGTGGCATCCAGACACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543867.2
CDS CAA 72 bp GTGAGCACTGCCCCTTCCTCTTTAATCGAGAACTCCTaGGCCAGCTACAGCCAGGTTTCCGGAGAGAGAAAG +
Preference number: 6 (lower is better)
Translates to: VSTAPSSLIENS*ASYSQVSGERK
Trigger: CTTTCTCTCTCCGGAAACCTGGCTGTAGCTGGCCAAGGAGTTCTCGATTAAAGAGGAAGGGGCAGTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596877.5
CDS CCA 72 bp GGTCTGTCTCCTCACTGGGTGAAGTATCCAGGCAGGTaGTTAATGCCATATATAGCAGCAGCAGAGAGGGGT +
Preference number: 6 (lower is better)
Translates to: GLSPHWVKYPGR*LMPYIAAAERG
Trigger: ACCCCTCTCTGCTGCTGCTATATATGGCATTAACCACCTGCCTGGATACTTCACCCAGTGAGGAGACAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246794.10
ENST00000543867.2
ENST00000596877.5
ENST00000597121.5
CDS CCA 72 bp GGGGACCCAGGAAGACTTCTTGGTCTGTCTCCTCACTaGGTGAAGTATCCAGGCAGGTGGTTAATGCCATAT +
Preference number: 6 (lower is better)
Translates to: GDPGRLLGLSPH*VKYPGRWLMPY
Trigger: ATATGGCATTAACCACCTGCCTGGATACTTCACCCAGTGAGGAGACAGACCAAGAAGTCTTCCTGGGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000246794.10
ENST00000596877.5
CDS CAA 90 bp CCCAGAAATGTGAGCACTGCCCCTTCCTCTTTAATCGAGAACTCCTaGGCCAGCTACAGCCAGGTTTCCGGAGAGAGAAAGAGAAGAGAG +
Preference number: 6 (lower is better)
Translates to: PRNVSTAPSSLIENS*ASYSQVSGERKRRE
Trigger: CTCTCTTCTCTTTCTCTCTCCGGAAACCTGGCTGTAGCTGGCCAAGGAGTTCTCGATTAAAGAGGAAGGGGCAGTGCTCACATTTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596877.5
CDS CCA 72 bp CTTCCCCCAAACACTCACCTTGGTCTGTCTCCTCACTaGGTGAAGTATCCAGGCAGGTGGTTAATGCCATAT +
Preference number: 6 (lower is better)
Translates to: LPPNTHLGLSPH*VKYPGRWLMPY
Trigger: ATATGGCATTAACCACCTGCCTGGATACTTCACCCAGTGAGGAGACAGACCAAGGTGAGTGTTTGGGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543867.2
CDS CCA 72 bp CTCCTGGAAGAGGAAGGACTTGGTCTGTCTCCTCACTaGGTGAAGTATCCAGGCAGGTGGTTAATGCCATAT +
Preference number: 6 (lower is better)
Translates to: LLEEEGLGLSPH*VKYPGRWLMPY
Trigger: ATATGGCATTAACCACCTGCCTGGATACTTCACCCAGTGAGGAGACAGACCAAGTCCTTCCTCTTCCAGGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597121.5