RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRR5L (Homo sapiens)

Ensembl gene IDs: ENSG00000135362

Ensembl transcript IDs: ENST00000378867.7, ENST00000389693.3, ENST00000524380.5, ENST00000525672.1, ENST00000526679.1, ENST00000526682.5, ENST00000526728.5, ENST00000527172.5, ENST00000527487.1, ENST00000527751.5, ENST00000529020.1, ENST00000529034.5, ENST00000530050.5, ENST00000530252.1, ENST00000530627.1, ENST00000530639.6, ENST00000531269.5, ENST00000532121.5, ENST00000532578.1, ENST00000532843.1

Found 436 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGAGCATCAGGCAGTCCAACATCGGAGGGAGAAAGGCCCAGAGATaGGGATCTGAGTCAGGCTGGCAAGGCTGGAGTCAGAAAGTGACC +
Preference number: 1 (lower is better)
Translates to: GSIRQSNIGGRKAQR*GSESGWQGWSQKVT
Trigger: GGTCACTTTCTGACTCCAGCCTTGCCAGCCTGACTCAGATCCTCATCTCTGGGCCTTTCTCCCTCCGATGTTGGACTGCCTGATGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR GCA 90 bp GCTCCAGCCTCGCGGCCCTCCTGGGTCAAAAGCCAAAGGCCTCTGTaGAAGCAGCACATAGGATCTGGATGTAGGTTGAGGATAGATCCT +
Preference number: 1 (lower is better)
Translates to: APASRPSWVKSQRPL*KQHIGSGCRLRIDP
Trigger: AGGATCTATCCTCAACCTACATCCAGATCCTATGTGCTGCTTGCACAGAGGCCTTTGGCTTTTGACCCAGGAGGGCCGCGAGGCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR GCA 90 bp CCTGGAGGGAGCAGTAGAAGGATGCAGCACCGTGCCAAGGCCTGCTaGCCCCAAGTGCTTCACATGCTAGAAATTCTCAGCATTTCTTTA +
Preference number: 1 (lower is better)
Translates to: PGGSSRRMQHRAKAC*PQVLHMLEILSISL
Trigger: TAAAGAAATGCTGAGAATTTCTAGCATGTGAAGCACTTGGGGGCAGCAGGCCTTGGCACGGTGCTGCATCCTTCTACTGCTCCCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR CCA 90 bp ATGTGTTGTCCTGACAACCTCCTGCTCCAGAAATGCCAGGAGCATTaGATATGTCATTGGGAGCATCAGGCAGTCCAACATCGGAGGGAG +
Preference number: 1 (lower is better)
Translates to: MCCPDNLLLQKCQEH*ICHWEHQAVQHRRE
Trigger: CTCCCTCCGATGTTGGACTGCCTGATGCTCCCAATGACATATCCAATGCTCCTGGCATTTCTGGAGCAGGAGGTTGTCAGGACAACACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR CCA 90 bp ATCAGTGAGACCGACAACTACAAAGAGGAGGATAGGGATTCAAGGTaGATAAAAGCCCCCAGACCTGGAGGGAGCAGTAGAAGGATGCAG +
Preference number: 1 (lower is better)
Translates to: ISETDNYKEEDRDSR*IKAPRPGGSSRRMQ
Trigger: CTGCATCCTTCTACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTCTTTGTAGTTGTCGGTCTCACTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR CCA 90 bp GGGAAATGCCATCAAGAGTTACATAATGAGAAGGTCTCATCACCGTaGCAGCTTAGACTGATCTTCACCTTCTCCCAGCACCCTCTTGCC +
Preference number: 1 (lower is better)
Translates to: GKCHQELHNEKVSSP*QLRLIFTFSQHPLA
Trigger: GGCAAGAGGGTGCTGGGAGAAGGTGAAGATCAGTCTAAGCTGCCACGGTGATGAGACCTTCTCATTATGTAACTCTTGATGGCATTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR TCA 90 bp AGAGATGAGGATCTGAGTCAGGCTGGCAAGGCTGGAGTCAGAAAGTaGCCATTAGGCAACTGGTCACTACAATTGGTGGCTACAAAGAAG +
Preference number: 1 (lower is better)
Translates to: RDEDLSQAGKAGVRK*PLGNWSLQLVATKK
Trigger: CTTCTTTGTAGCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTGCCAGCCTGACTCAGATCCTCATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR GCA 90 bp CTTGGTGGTTATATGTGTTGTCCTGACAACCTCCTGCTCCAGAAATaGCAGGAGCATTGGATATGTCATTGGGAGCATCAGGCAGTCCAA +
Preference number: 1 (lower is better)
Translates to: LGGYMCCPDNLLLQK*QEHWICHWEHQAVQ
Trigger: TTGGACTGCCTGATGCTCCCAATGACATATCCAATGCTCCTGGCATTTCTGGAGCAGGAGGTTGTCAGGACAACACATATAACCACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR GCA 90 bp GCCAACACATCCTTGGTGGTTATATGTGTTGTCCTGACAACCTCCTaGTCCAGAAATGCCAGGAGCATTGGATATGTCATTGGGAGCATC +
Preference number: 1 (lower is better)
Translates to: ANTSLVVICVVLTTS*SRNARSIGYVIGSI
Trigger: GATGCTCCCAATGACATATCCAATGCTCCTGGCATTTCTGGAGCAGGAGGTTGTCAGGACAACACATATAACCACCAAGGATGTGTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR CCA 90 bp CTTTTCCTAGAAACCATGAAATTTACGAATTTACACAAGCCATTGTaGGTTCAAGTCCAGCTGCTTCTAGAGCTCTGTGACCTAACAGCC +
Preference number: 1 (lower is better)
Translates to: LFLETMKFTNLHKPL*VQVQLLLELCDLTA
Trigger: GGCTGTTAGGTCACAGAGCTCTAGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCTAGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTGCCTATGAGGCAAACTaGGTCTCCCCACCCCAATGC +
Preference number: 2 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSAYEAN*VSPPQC
Trigger: GCATTGGGGTGGGGAGACCCAGTTTGCCTCATAGGC...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR TCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTAGAATCCTCTGCCTATaGGGCAAACTGGGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSRILCL*GKLGLP
Trigger: GGGGAGACCCAGTTTGCCTCATAGGCAGAGGATTCT...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTAGTAATCCACGGAGATaGAGGGGTCCTCATCCTGGT +
Preference number: 2 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSSNPRR*RGPHPG
Trigger: ACCAGGATGAGGACCCCTCCATCTCCGTGGATTACT...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACTACAGGCCAGTTGGTTaGTATCAGCTGGCCCCTCAT +
Preference number: 2 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNYRPVG*YQLAPH
Trigger: ATGAGGGGCCAGCTGATACCAACCAACTGGCCTGTA...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR TCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCCCCTTAGGTCATTTTaGCCAGGACAGTACCCTAAA +
Preference number: 2 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSPLRSF*PGQYPK
Trigger: TTTAGGGTACTGTCCTGGTCAAAATGACCTAAGGGG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCATTGGATATGTCATTaGGAGCATCAGGCAGTCCAA +
Preference number: 2 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSHWICH*EHQAVQ
Trigger: TTGGACTGCCTGATGCTCCCAATGACATATCCAATG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR TCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACGAGAAAGTCCGTTTCTaGAATGAGAGAGACAAGAGG +
Preference number: 2 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNEKVRF*NERDKR
Trigger: CCTCTTGTCTCTCTCATTTCAGAAACGGACTTTCTC...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTAGTAATCCACGGAGATaGAGGGGTCCTCATCCTGGT +
Preference number: 2 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSSNPRR*RGPHPG
Trigger: ACCAGGATGAGGACCCCTCCATCTCCGTGGATTACT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR TCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACCTTGTGTTTTTAGTGTaGAGACTCACCCCACTGAAA +
Preference number: 2 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNLVFLV*RLTPLK
Trigger: TTTCAGTGGGGTGAGTCTTCACACTAAAAACACAAG...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTATCCTCACCCACCAGTaGGGTAACTTTCCCAGCAAT +
Preference number: 2 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSILTHQ*GNFPSN
Trigger: ATTGCTGGGAAAGTTACCCCACTGGTGGGTGAGGAT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR TCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTCCCCTTAGGTCATTTTaGCCAGGACAGTACCCTAAA +
Preference number: 2 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSPLRSF*PGQYPK
Trigger: TTTAGGGTACTGTCCTGGTCAAAATGACCTAAGGGG...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR TCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTCCAGAGATGAGGATCTaGGTCAGGCTGGCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASPEMRI*VRLARL
Trigger: CAGCCTTGCCAGCCTGACTCAGATCCTCATCTCTGG...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTGCCTCGCGGCCCTCCTaGGTCAAAAGCCAAAGGCCT +
Preference number: 2 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSASRPS*VKSQRP
Trigger: AGGCCTTTGGCTTTTGACCCAGGAGGGCCGCGAGGC...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR TCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTCCAGAGATGAGGATCTaGGTCAGGCTGGCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAPEMRI*VRLARL
Trigger: CAGCCTTGCCAGCCTGACTCAGATCCTCATCTCTGG...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTAGGCCAACACATCCTTaGTGGTTATATGTGTTGTCC +
Preference number: 2 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSRPTHP*WLYVLS
Trigger: GGACAACACATATAACCACCAAGGATGTGTTGGCCT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTGAGGGGTCCTCATCCTaGTTGCAAAACAGGAGATGG +
Preference number: 2 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASEGSSS*LQNRRW
Trigger: CCATCTCCTGTTTTGCAACCAGGATGAGGACCCCTC...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTACTGGTCACTACAATTaGTGGCTACAAAGAAGTGGT +
Preference number: 2 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSTGHYN*WLQRSG
Trigger: ACCACTTCTTTGTAGCCACCAATTGTAGTGACCAGT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR TCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTGCTGGAGTCAGAAAGTaGCCATTAGGCAACTGGTCA +
Preference number: 2 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASAGVRK*PLGNWS
Trigger: TGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGC...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR TCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTAGAATCCTCTGCCTATaGGGCAAACTGGGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSRILCL*GKLGLP
Trigger: GGGGAGACCCAGTTTGCCTCATAGGCAGAGGATTCT...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR TCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTCGTGGCAGCTTAGACTaGTCTTCACCTTCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSRGSLD*SSPSPS
Trigger: GCTGGGAGAAGGTGAAGATCAGTCTAAGCTGCCACG...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR GCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTGTCCTGACAACCTCCTaGTCCAGAAATGCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSVLTTS*SRNARS
Trigger: GCTCCTGGCATTTCTGGAGCAGGAGGTTGTCAGGAC...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGGATCTGAGTCAGGCTaGCAAGGCTGGAGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAGSESG*QGWSQK
Trigger: TTTCTGACTCCAGCCTTGCCAGCCTGACTCAGATCC...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTTTGGTTGGTATCAGCTaGCCCCTCATACCCACCATA +
Preference number: 2 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASLVGIS*PLIPTI
Trigger: TATGGTGGGTATGAGGGGCCAGCTGATACCAACCAA...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR GCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTAGCCAAAGGCCTCTGTaGAAGCAGCACATAGGATCT +
Preference number: 2 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPASQRPL*KQHIGS
Trigger: AGATCCTATGTGCTGCTTGCACAGAGGCCTTTGGCT...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTGAGGGGTCCTCATCCTaGTTGCAAAACAGGAGATGG +
Preference number: 2 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSEGSSS*LQNRRW
Trigger: CCATCTCCTGTTTTGCAACCAGGATGAGGACCCCTC...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTTCACTCTACACAAAATaGGGGAGAGGAGTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASSLYTK*GRGVPS
Trigger: AGAGGGAACTCCTCTCCCCCATTTTGTGTAGAGTGA...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTTACAGGCCAGTTGGTTaGTATCAGCTGGCCCCTCAT +
Preference number: 2 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSYRPVG*YQLAPH
Trigger: ATGAGGGGCCAGCTGATACCAACCAACTGGCCTGTA...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR TCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTAGTCCGTTTCTGAAATaGGAGAGACAAGAGGCACCA +
Preference number: 2 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPASPFLK*ERQEAP
Trigger: TGGTGCCTCTTGTCTCTCTCATTTCAGAAACGGACT...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR GCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTAGCCAAAGGCCTCTGTaGAAGCAGCACATAGGATCT +
Preference number: 2 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSSQRPL*KQHIGS
Trigger: AGATCCTATGTGCTGCTTGCACAGAGGCCTTTGGCT...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTCATTGGATATGTCATTaGGAGCATCAGGCAGTCCAA +
Preference number: 2 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASHWICH*EHQAVQ
Trigger: TTGGACTGCCTGATGCTCCCAATGACATATCCAATG...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTTCACTCTACACAAAATaGGGGAGAGGAGTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPASLYTK*GRGVPS
Trigger: AGAGGGAACTCCTCTCCCCCATTTTGTGTAGAGTGA...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR TCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTTTATATGTGTTGTCCTaGCAACCTCCTGCTCCAGAA +
Preference number: 2 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPALYVLS*QPPAPE
Trigger: TTCTGGAGCAGGAGGTTGTCAGGACAACACATATAA...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR TCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTCTTGTGTTTTTAGTGTaGAGACTCACCCCACTGAAA +
Preference number: 2 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASLVFLV*RLTPLK
Trigger: TTTCAGTGGGGTGAGTCTTCACACTAAAAACACAAG...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR GCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTCTCCTGCTCCAGAAATaGCAGGAGCATTGGATATGT +
Preference number: 2 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSLLLQK*QEHWIC
Trigger: ACATATCCAATGCTCCTGGCATTTCTGGAGCAGGAG...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTACTGGTCACTACAATTaGTGGCTACAAAGAAGTGGT +
Preference number: 2 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASTGHYN*WLQRSG
Trigger: ACCACTTCTTTGTAGCCACCAATTGTAGTGACCAGT...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTGATAGGGATTCAAGGTaGATAAAAGCCCCCAGACCT +
Preference number: 2 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSDRDSR*IKAPRP
Trigger: AGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATC...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTGGTCACTACAATTGGTaGCTACAAAGAAGTGGTCAC +
Preference number: 2 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSGHYNW*LQRSGH
Trigger: GTGACCACTTCTTTGTAGCCACCAATTGTAGTGACC...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTAAATGCCAGGAGCATTaGATATGTCATTGGGAGCAT +
Preference number: 2 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAKCQEH*ICHWEH
Trigger: ATGCTCCCAATGACATATCCAATGCTCCTGGCATTT...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTAGGCCAACACATCCTTaGTGGTTATATGTGTTGTCC +
Preference number: 2 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSRPTHP*WLYVLS
Trigger: GGACAACACATATAACCACCAAGGATGTGTTGGCCT...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTAAATGCCAGGAGCATTaGATATGTCATTGGGAGCAT +
Preference number: 2 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSKCQEH*ICHWEH
Trigger: ATGCTCCCAATGACATATCCAATGCTCCTGGCATTT...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CAA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTGTGAGTTCCTTGAGCTaGAGAGGAAGCCTGAGAGGG +
Preference number: 3 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSVSSLS*RGSLRG
Trigger: CCCTCTCAGGCTTCCTCTCAAGCTCAAGGAACTCAC...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CAA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACCTGGGGGTGAGTTCCTaGAGCTTGAGAGGAAGCCTG +
Preference number: 3 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNLGVSS*SLRGSL
Trigger: CAGGCTTCCTCTCAAGCTCAAGGAACTCACCCCCAG...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR TCA 72 bp CAACATCGGAGGGAGAAAGGCCCAGAGATGAGGATCTaGGTCAGGCTGGCAAGGCTGGAGTCAGAAAGTGAC +
Preference number: 3 (lower is better)
Translates to: QHRREKGPEMRI*VRLARLESESD
Trigger: GTCACTTTCTGACTCCAGCCTTGCCAGCCTGACTCAGATCCTCATCTCTGGGCCTTTCTCCCTCCGATGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR GCA 72 bp AGCAGTAGAAGGATGCAGCACCGTGCCAAGGCCTGCTaGCCCCAAGTGCTTCACATGCTAGAAATTCTCAGC +
Preference number: 3 (lower is better)
Translates to: SSRRMQHRAKAC*PQVLHMLEILS
Trigger: GCTGAGAATTTCTAGCATGTGAAGCACTTGGGGGCAGCAGGCCTTGGCACGGTGCTGCATCCTTCTACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CAA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACGCATTGGATATGTCATaGGGAGCATCAGGCAGTCCA +
Preference number: 3 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNALDMS*GASGSP
Trigger: TGGACTGCCTGATGCTCCCAATGACATATCCAATGC...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CAA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACGAAATGCCAGGAGCATaGGATATGTCATTGGGAGCA +
Preference number: 3 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNEMPGA*DMSLGA
Trigger: TGCTCCCAATGACATATCCAATGCTCCTGGCATTTC...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CAA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTATACAGGCCAGTTGGTaGGTATCAGCTGGCCCCTCA +
Preference number: 3 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSIQASW*VSAGPS
Trigger: TGAGGGGCCAGCTGATACCAACCAACTGGCCTGTAT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR TCA 72 bp GATCTGAGTCAGGCTGGCAAGGCTGGAGTCAGAAAGTaGCCATTAGGCAACTGGTCACTACAATTGGTGGCT +
Preference number: 3 (lower is better)
Translates to: DLSQAGKAGVRK*PLGNWSLQLVA
Trigger: AGCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTGCCAGCCTGACTCAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR CCA 72 bp CTGCTCCAGAAATGCCAGGAGCATTGGATATGTCATTaGGAGCATCAGGCAGTCCAACATCGGAGGGAGAAA +
Preference number: 3 (lower is better)
Translates to: LLQKCQEHWICH*EHQAVQHRREK
Trigger: TTTCTCCCTCCGATGTTGGACTGCCTGATGCTCCCAATGACATATCCAATGCTCCTGGCATTTCTGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR CCA 72 bp CCTGACAACCTCCTGCTCCAGAAATGCCAGGAGCATTaGATATGTCATTGGGAGCATCAGGCAGTCCAACAT +
Preference number: 3 (lower is better)
Translates to: PDNLLLQKCQEH*ICHWEHQAVQH
Trigger: ATGTTGGACTGCCTGATGCTCCCAATGACATATCCAATGCTCCTGGCATTTCTGGAGCAGGAGGTTGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR TCA 72 bp AGGCCAACACATCCTTGGTGGTTATATGTGTTGTCCTaGCAACCTCCTGCTCCAGAAATGCCAGGAGCATTG +
Preference number: 3 (lower is better)
Translates to: RPTHPWWLYVLS*QPPAPEMPGAL
Trigger: CAATGCTCCTGGCATTTCTGGAGCAGGAGGTTGTCAGGACAACACATATAACCACCAAGGATGTGTTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CAA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTATACAGGCCAGTTGGTaGGTATCAGCTGGCCCCTCA +
Preference number: 3 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASIQASW*VSAGPS
Trigger: TGAGGGGCCAGCTGATACCAACCAACTGGCCTGTAT...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR GCA 72 bp TATATGTGTTGTCCTGACAACCTCCTGCTCCAGAAATaGCAGGAGCATTGGATATGTCATTGGGAGCATCAG +
Preference number: 3 (lower is better)
Translates to: YMCCPDNLLLQK*QEHWICHWEHQ
Trigger: CTGATGCTCCCAATGACATATCCAATGCTCCTGGCATTTCTGGAGCAGGAGGTTGTCAGGACAACACATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR CCA 72 bp AGTCAAATCCAGATAGATAGATACAGGCCAGTTGGTTaGTATCAGCTGGCCCCTCATACCCACCATAGGAAA +
Preference number: 3 (lower is better)
Translates to: SQIQIDRYRPVG*YQLAPHTHHRK
Trigger: TTTCCTATGGTGGGTATGAGGGGCCAGCTGATACCAACCAACTGGCCTGTATCTATCTATCTGGATTTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CAA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGTGAGTTCCTTGAGCTaGAGAGGAAGCCTGAGAGGG +
Preference number: 3 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAVSSLS*RGSLRG
Trigger: CCCTCTCAGGCTTCCTCTCAAGCTCAAGGAACTCAC...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CAA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTATAGATACAGGCCAGTaGGTTGGTATCAGCTGGCCC +
Preference number: 3 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASIDTGQ*VGISWP
Trigger: GGGCCAGCTGATACCAACCAACTGGCCTGTATCTAT...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR TCA 72 bp CCCACCATAGGAAAGCATGATGAGAAAGTCCGTTTCTaGAATGAGAGAGACAAGAGGCACCAGCTTCTTATC +
Preference number: 3 (lower is better)
Translates to: PTIGKHDEKVRF*NERDKRHQLLI
Trigger: GATAAGAAGCTGGTGCCTCTTGTCTCTCTCATTTCAGAAACGGACTTTCTCATCATGCTTTCCTATGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR GCA 72 bp TCCTTGGTGGTTATATGTGTTGTCCTGACAACCTCCTaGTCCAGAAATGCCAGGAGCATTGGATATGTCATT +
Preference number: 3 (lower is better)
Translates to: SLVVICVVLTTS*SRNARSIGYVI
Trigger: AATGACATATCCAATGCTCCTGGCATTTCTGGAGCAGGAGGTTGTCAGGACAACACATATAACCACCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR TCA 72 bp AGAGGTTTACAACAACGGTTTCCCCTTAGGTCATTTTaGCCAGGACAGTACCCTAAAGGAAATAAGGCAGCA +
Preference number: 3 (lower is better)
Translates to: RGLQQRFPLRSF*PGQYPKGNKAA
Trigger: TGCTGCCTTATTTCCTTTAGGGTACTGTCCTGGTCAAAATGACCTAAGGGGAAACCGTTGTTGTAAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CAA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCATTGGATATGTCATaGGGAGCATCAGGCAGTCCA +
Preference number: 3 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAALDMS*GASGSP
Trigger: TGGACTGCCTGATGCTCCCAATGACATATCCAATGC...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR CCA 72 bp GAAACCATGAAATTTACGAATTTACACAAGCCATTGTaGGTTCAAGTCCAGCTGCTTCTAGAGCTCTGTGAC +
Preference number: 3 (lower is better)
Translates to: ETMKFTNLHKPL*VQVQLLLELCD
Trigger: GTCACAGAGCTCTAGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CAA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGAAATGCCAGGAGCATaGGATATGTCATTGGGAGCA +
Preference number: 3 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAEMPGA*DMSLGA
Trigger: TGCTCCCAATGACATATCCAATGCTCCTGGCATTTC...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CAA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTGGATCTGGATGTAGGTaGAGGATAGATCCTCACCCA +
Preference number: 3 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSGSGCR*RIDPHP
Trigger: TGGGTGAGGATCTATCCTCAACCTACATCCAGATCC...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CAA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTAAGGCCAACACATCCTaGGTGGTTATATGTGTTGTC +
Preference number: 3 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSKANTS*VVICVV
Trigger: GACAACACATATAACCACCAAGGATGTGTTGGCCTT...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR-3UTR CAA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTATCAGCAGATCTCTTTaGGACATTTCTCTCCCATCA +
Preference number: 3 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSISRSL*DISLPS
Trigger: TGATGGGAGAGAAATGTCCAAAAGAGATCTGCTGAT...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR TCA 72 bp AACAGTCATCAGCACTTAAGTACACTGGGTCTATACTaGCACTTCCATTCTCATTTTAAGAGCTTATATATT +
Preference number: 3 (lower is better)
Translates to: NSHQHLSTLGLY*HFHSHFKSLYI
Trigger: AATATATAAGCTCTTAAAATGAGAATGGAAGTGTCAGTATAGACCCAGTGTACTTAAGTGCTGATGACTGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCCTTGGGCCGGACCCTaGAGTGCCGCCTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSPWAGP*SAAWPA
Trigger: CGCTGGCCAGGCGGCACTCCAGGGTCCGGCCCAAGG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp GGTCAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGAGCTGGAGCTCAGCTaGAGAGCCTGCCGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GQDHLIQWPADCGYRGGIELELS*RACRAA
Trigger: AGCAGCTCGGCAGGCTCTGCAGCTGAGCTCCAGCTC...TATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR CCA 90 bp GACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAGGCCTGCCGAGCTGCTTaGAATCGGGGAAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: DHLIQWPADCGYRGGIVQACRAA*NRGRSL
Trigger: CAGCGACCTTCCCCGATTCCAAGCAGCTCGGCAGGC...CTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR TCA 90 bp CAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCATTCAGTGGCCGGCTaGCTGCGGTTATCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QDHLIQWPADCGYRGGIVHSVAG*LRLSGR
Trigger: CCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATG...AACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR GCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGACACAACGGGAGATCTaGAGCCGACCCCCGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMTQREI*SRPPPP
Trigger: CGGGGGCGGGGGTCGGCTGCAGATCTCCCGTTGTGT...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000378867.7
CDS-3UTR GCA 90 bp GACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAGCAGAGCCTGCCGAGCTaGTTGGAATCGGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: DHLIQWPADCGYRGGIVQQSLPS*LESGKV
Trigger: GACCTTCCCCGATTCCAAGCAGCTCGGCAGGCTCTG...CTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR GCA 90 bp GGTCAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATACTCAGCTGCAGAGCCTaGCGAGCTGCTTGGAATCGG +
Preference number: 4 (lower is better)
Translates to: GQDHLIQWPADCGYRGGILSCRA*RAAWNR
Trigger: CCGATTCCAAGCAGCTCGGCAGGCTCTGCAGCTGAG...TATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR GCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCACCGTGCCAAGGCCTaGTGCCCCCAAGTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSHRAKA*CPQVLH
Trigger: GTGAAGCACTTGGGGGCAGCAGGCCTTGGCACGGTG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTACTCGACGGGCAGAATaGGAGCGAAGCCGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSTRRAE*ERSRGS
Trigger: TGACCCGCGGCTTCGCTCCCATTCTGCCCGTCGAGT...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTACTCGACGGGCAGAATaGGAGCGAAGCCGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: QDHLIQWPADCGYRGGIVTRRAE*ERSRGS
Trigger: TGACCCGCGGCTTCGCTCCCATTCTGCCCGTCGAGT...AACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR CCA 90 bp GACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAGCCCAGCAGGGAGATCTaGCGGATAGTCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: DHLIQWPADCGYRGGIVQPSREI*RIVSSW
Trigger: CCAGGAGCTGACTATCCGCCAGATCTCCCTGCTGGG...CTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR CCA 90 bp CAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTTGGACGAGGGCAGCTTaGACTGGGCCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QDHLIQWPADCGYRGGIVWTRAA*TGPAAA
Trigger: TGCTGCTGCTGGCCCAGTCCAAGCTGCCCTCGTCCA...AACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR CCA 90 bp CAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTTCAGGACAGTCACCTTaGGCCGGACCCTGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: QDHLIQWPADCGYRGGIVSGQSP*AGPWSA
Trigger: GGCACTCCAGGGTCCGGCCCAAGGTGACTGTCCTGA...AACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR CCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTACTTGTTCTCACTGCTaGCCTCCTCCCCCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSTCSHC*PPPPGP
Trigger: CGGGCCTGGGGGAGGAGGCCAGCAGTGAGAACAAGT...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp GGTCAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATACCCTGGAGTGCCGCCTaGCTGCAGGATGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: GQDHLIQWPADCGYRGGIPWSAA*LQDEQH
Trigger: ATGTTGCTCATCCTGCAGCCAGGCGGCACTCCAGGG...TATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR TCA 90 bp CAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTAACGCTGTTCCAGGCTaGGCTGGAGCTCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QDHLIQWPADCGYRGGIVNAVPG*AGAQLQ
Trigger: CTGCAGCTGAGCTCCAGCTCAGCCTGGAACAGCGTT...AACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR TCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACGGGCCTGTGGGCTCGTaGACACTCTGCAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNGPVGS*TLCRMS
Trigger: GCTCATCCTGCAGAGTGTTCACGAGCCCACAGGCCC...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTGGGTGGCGACTCAGCTaGGGGAAGCACAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSGWRLS*GKHSSA
Trigger: AGCTGAACTGTGCTTCCCTCAGCTGAGTCGCCACCC...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAGGACCGCCTGGCTGCAGGATaGGCAACATCTGGACAATGG +
Preference number: 4 (lower is better)
Translates to: HLIQWPADCGYRGGIVQDRLAAG*ATSGQW
Trigger: CCATTGTCCAGATGTTGCTCATCCTGCAGCCAGGCG...GTCCTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR GCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCAGAGCCTGCCGAGCTaGTTGGAATCGGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSQSLPS*LESGKV
Trigger: GACCTTCCCCGATTCCAAGCAGCTCGGCAGGCTCTG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCTCAGCTGCAGAGCCTaGCGAGCTGCTTGGAATCGG +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSLSCRA*RAAWNR
Trigger: CCGATTCCAAGCAGCTCGGCAGGCTCTGCAGCTGAG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCAGTGGCCGGCTGACTaGGGTTATCGGGGAGGCATA +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSQWPAD*GYRGGI
Trigger: TATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAGTGGCCGGCTGACTaGGGTTATCGGGGAGGCATA +
Preference number: 4 (lower is better)
Translates to: QDHLIQWPADCGYRGGIVQWPAD*GYRGGI
Trigger: TATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTG...AACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR GCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACCACCGTGCCAAGGCCTaGTGCCCCCAAGTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNHRAKA*CPQVLH
Trigger: GTGAAGCACTTGGGGGCAGCAGGCCTTGGCACGGTG...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACACTCGACGGGCAGAATaGGAGCGAAGCCGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNTRRAE*ERSRGS
Trigger: TGACCCGCGGCTTCGCTCCCATTCTGCCCGTCGAGT...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCCCAGCAGGGAGATCTaGCGGATAGTCAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSPSREI*RIVSSW
Trigger: CCAGGAGCTGACTATCCGCCAGATCTCCCTGCTGGG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACTGGACGAGGGCAGCTTaGACTGGGCCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNWTRAA*TGPAAA
Trigger: TGCTGCTGCTGGCCCAGTCCAAGCTGCCCTCGTCCA...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTGCATCATGGTGGCCATaGCCAGCAGCTGGATGTCCG +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSASWWP*PAAGCP
Trigger: CGGACATCCAGCTGCTGGCCATGGCCACCATGATGC...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp GACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAGGGGCATAGAGCTCGTTaGTTTGCAAGCCACCCCCTT +
Preference number: 4 (lower is better)
Translates to: DHLIQWPADCGYRGGIVQGHRAR*FASHPL
Trigger: AAGGGGGTGGCTTGCAAAGCAACGAGCTCTATGCCC...CTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR GCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGTGTGCCGCCGCACGCTaGCACACTTCTCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMCAAAR*HTSPGR
Trigger: CCTACCTGGAGAAGTGTGGCAGCGTGCGGCGGCACA...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTGCATTGGCCACCGTGTaGCGCCGCACGCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSALATV*RRTLPH
Trigger: GTGTGGCAGCGTGCGGCGGCACACGGTGGCCAATGC...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCTCCCCCAGGCCCGAGTaGATCATGGTGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGSPRPE*IMVAMA
Trigger: GGCCATGGCCACCATGATGCACTCGGGCCTGGGGGA...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACCGTGCCAAGGCCTGCTaGCCCCAAGTGCTTCACATG +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNRAKAC*PQVLHM
Trigger: CATGTGAAGCACTTGGGGGCAGCAGGCCTTGGCACG...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGAAGGATGCAGCACCGTaGCAAGGCCTGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMKDAAP*QGLLPP
Trigger: TGGGGGCAGCAGGCCTTGGCACGGTGCTGCATCCTT...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGTGGACGAGGGCAGCTTaGACTGGGCCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMWTRAA*TGPAAA
Trigger: TGCTGCTGCTGGCCCAGTCCAAGCTGCCCTCGTCCA...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGTCAGGACAGTCACCTTaGGCCGGACCCTGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMSGQSP*AGPWSA
Trigger: GGCACTCCAGGGTCCGGCCCAAGGTGACTGTCCTGA...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACGCCATGGCCAGCAGCTaGATGTCCGAGTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNAMASS*MSEWAL
Trigger: CAATGCCCACTCGGACATCCAGCTGCTGGCCATGGC...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACGCATCATGGTGGCCATaGCCAGCAGCTGGATGTCCG +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNASWWP*PAAGCP
Trigger: CGGACATCCAGCTGCTGGCCATGGCCACCATGATGC...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGGCCTCGCGGCCCTCCTaGGTCAAAAGCCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMASRPS*VKSQRP
Trigger: AGGCCTTTGGCTTTTGACCCAGGAGGGCCGCGAGGC...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACAGCTACGGTCCCCGCTaGTGCCGAGGAAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNSYGPR*CRGKEK
Trigger: TTTCTCCTTTCCTCGGCATCAGCGGGGACCGTAGCT...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCCATTCAGTGGCCGGCTaGCTGCGGTTATCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGHSVAG*LRLSGR
Trigger: CCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATG...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACTTCCCAGAGCCCTGCTaGGTAGGGGCTTCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNFPEPC*VGASGY
Trigger: ATAGCCTGAAGCCCCTACTCAGCAGGGCTCTGGGAA...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCGTGGCAGCTTAGACTaGTCTTCACCTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSRGSLD*SSPSPS
Trigger: GCTGGGAGAAGGTGAAGATCAGTCTAAGCTGCCACG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTGGGCATAGAGCTCGTTaGTTTGCAAGCCACCCCCTT +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSGHRAR*FASHPL
Trigger: AAGGGGGTGGCTTGCAAAGCAACGAGCTCTATGCCC...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTTCCCCCAGGCCCGAGTaGATCATGGTGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSSPRPE*IMVAMA
Trigger: GGCCATGGCCACCATGATGCACTCGGGCCTGGGGGA...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCCTTCCAAAAGGTCCTaGCCACATCTCCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSPSKRS*PHLPSL
Trigger: GAGAGAGGGGAGATGTGGGCAGGACCTTTTGGAAGG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp GGTCAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAAAGGAGCCCATCTTGTaGAACTCGACGGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: GQDHLIQWPADCGYRGGIKEPIL*NSTGRM
Trigger: CATTCTGCCCGTCGAGTTCCACAAGATGGGCTCCTT...TATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR CCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCGCCTGCCGAGCTGCTTaGAATCGGGGAAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGACRAA*NRGRSL
Trigger: CAGCGACCTTCCCCGATTCCAAGCAGCTCGGCAGGC...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAGGACAGGATGAGCAACATCTaGACAATGGACGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HLIQWPADCGYRGGIVQDRMSNI*TMDEGS
Trigger: GCTGCCCTCGTCCATTGTCCAGATGTTGCTCATCCT...GTCCTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR CCA 90 bp CATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAGGACGACCATCTCATTCAGTaGCCGGCTGACTGCGGTTAT +
Preference number: 4 (lower is better)
Translates to: HLIQWPADCGYRGGIVQDDHLIQ*PADCGY
Trigger: ATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTC...GTCCTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR CCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTTGTCCGAGTGGGCATTaGCCACCGTGTGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSCPSGH*PPCAAA
Trigger: TGCGGCGGCACACGGTGGCCAATGCCCACTCGGACA...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGCCGAGTGCATCATGGTaGCCATGGCCAGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMPSASW*PWPAAG
Trigger: TCCAGCTGCTGGCCATGGCCACCATGATGCACTCGG...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCGGCCCGAGTGCATCATaGTGGCCATGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGGPSAS*WPWPAA
Trigger: AGCTGCTGGCCATGGCCACCATGATGCACTCGGGCC...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCGCCTCGCGGCCCTCCTaGGTCAAAAGCCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGASRPS*VKSQRP
Trigger: AGGCCTTTGGCTTTTGACCCAGGAGGGCCGCGAGGC...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGAGCTACGGTCCCCGCTaGTGCCGAGGAAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMSYGPR*CRGKEK
Trigger: TTTCTCCTTTCCTCGGCATCAGCGGGGACCGTAGCT...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGCGTCAGGGTTGTCAGTaGTGTTGGGCTCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMRQGCQ*CWAHWS
Trigger: GCTCCAGTGAGCCCAACATCACTGACAACCCTGACG...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCCTCAGCTGCAGAGCCTaGCGAGCTGCTTGGAATCGG +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGLSCRA*RAAWNR
Trigger: CCGATTCCAAGCAGCTCGGCAGGCTCTGCAGCTGAG...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTGGCACTTGTTCTCACTaGTGGCCTCCTCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSGTCSH*WPPPPG
Trigger: GCCTGGGGGAGGAGGCCAGCAGTGAGAACAAGTGCC...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTAAGGAGCCCATCTTGTaGAACTCGACGGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSKEPIL*NSTGRM
Trigger: CATTCTGCCCGTCGAGTTCCACAAGATGGGCTCCTT...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACTCTCACTTGGGCCTGTaGGCTCGTGAACACTCTGCA +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNSHLGL*AREHSA
Trigger: TGCAGAGTGTTCACGAGCCCACAGGCCCAAGTGAGA...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCCCGAGTGCATCATGGTaGCCATGGCCAGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGPSASW*PWPAAG
Trigger: TCCAGCTGCTGGCCATGGCCACCATGATGCACTCGG...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTGGCCCGAGTGCATCATaGTGGCCATGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSGPSAS*WPWPAA
Trigger: AGCTGCTGGCCATGGCCACCATGATGCACTCGGGCC...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTGGATCTGAGTCAGGCTaGCAAGGCTGGAGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSGSESG*QGWSQK
Trigger: TTTCTGACTCCAGCCTTGCCAGCCTGACTCAGATCC...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTTACAGGCCAGTTGGTTaGTATCAGCTGGCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSYRPVG*YQLAPH
Trigger: ATGAGGGGCCAGCTGATACCAACCAACTGGCCTGTA...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTGGTCATAAGTCCTGGTaGCAGTTCAGCTTCACCTCT +
Preference number: 4 (lower is better)
Translates to: QDHLIQWPADCGYRGGIVGHKSW*QFSFTS
Trigger: AGAGGTGAAGCTGAACTGTCACCAGGACTTATGACC...AACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR TCA 90 bp GACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAGCACCTTCACACAGCTTaGTCTTCTCCTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: DHLIQWPADCGYRGGIVQHLHTA*SSPPQR
Trigger: TCTTTGTGGAGGAGAAGATCAAGCTGTGTGAAGGTG...CTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR TCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTGCTGGAGTCAGAAAGTaGCCATTAGGCAACTGGTCA +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSAGVRK*PLGNWS
Trigger: TGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGC...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCCCAGAGATGAGGATCTaGGTCAGGCTGGCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGPEMRI*VRLARL
Trigger: CAGCCTTGCCAGCCTGACTCAGATCCTCATCTCTGG...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCGCTTCTAGAGCTCTGTaGCCTAACAGCCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGASRAL*PNSPAH
Trigger: GTGGGCAGGGCTGTTAGGTCACAGAGCTCTAGAAGC...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGAGAATCCTCTGCCTATaGGGCAAACTGGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMRILCL*GKLGLP
Trigger: GGGGAGACCCAGTTTGCCTCATAGGCAGAGGATTCT...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGCCAGAAGGTTCCGAATaGCCTCGGAAAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMPEGSE*PRKGLL
Trigger: GAGAAGCCCTTTCCGAGGGCATTCGGAACCTTCTGG...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTGGCCGGACCCTGGAGTaGCGCCTGGCCAGCGTGTAC +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASGRTLE*RLASVY
Trigger: GTACACGCTGGCCAGGCGGCACTCCAGGGTCCGGCC...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTCAGTGGCCGGCTGACTaGGGTTATCGGGGAGGCATA +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSQWPAD*GYRGGI
Trigger: TATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTG...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGGTCCTGACAACCTCCTaGTCCAGAAATGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMVLTTS*SRNARS
Trigger: GCTCCTGGCATTTCTGGAGCAGGAGGTTGTCAGGAC...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTCGTGCCAAGGCCTGCTaGCCCCAAGTGCTTCACATG +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSRAKAC*PQVLHM
Trigger: CATGTGAAGCACTTGGGGGCAGCAGGCCTTGGCACG...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTTGGCCAGCGTGTACGTaGGGCCTGAGAAGCTACGGT +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSWPACT*GLRSYG
Trigger: ACCGTAGCTTCTCAGGCCCCACGTACACGCTGGCCA...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTAGCTGGATGTCCGAGTaGGCATTGGCCACCGTGTGC +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSSWMSE*ALATVC
Trigger: GCACACGGTGGCCAATGCCCACTCGGACATCCAGCT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR CAA 72 bp CCTGCTCCAGAAATGCCAGGAGCATTGGATATGTCATaGGGAGCATCAGGCAGTCCAACATCGGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: PAPEMPGALDMS*GASGSPTSEGE
Trigger: TTCTCCCTCCGATGTTGGACTGCCTGATGCTCCCAATGACATATCCAATGCTCCTGGCATTTCTGGAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTAGTCCGTTTCTGAAATaGGAGAGACAAGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSSPFLK*ERQEAP
Trigger: TGGTGCCTCTTGTCTCTCTCATTTCAGAAACGGACT...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAGGACCAGCCAGAACCTCAATaGGATTTTCACCTTCACACA +
Preference number: 4 (lower is better)
Translates to: HLIQWPADCGYRGGIVQDQPEPQ*DFHLHT
Trigger: TGTGTGAAGGTGAAAATCGCATTGAGGTTCTGGCTG...GTCCTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR GCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGGCCGGACCCTGGAGTaGCGCCTGGCCAGCGTGTAC +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAGRTLE*RLASVY
Trigger: GTACACGCTGGCCAGGCGGCACTCCAGGGTCCGGCC...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCTCCTGCTCCAGAAATaGCAGGAGCATTGGATATGT +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSLLLQK*QEHWIC
Trigger: ACATATCCAATGCTCCTGGCATTTCTGGAGCAGGAG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTGGAGCAGTAGAAGGATaGAGCACCGTGCCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSGAVEG*STVPRP
Trigger: AGGCCTTGGCACGGTGCTGCATCCTTCTACTGCTCC...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCTCCTGGCCCTGAACTaGATAAAATATTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QDHLIQWPADCGYRGGIVLLALN*IKYCLQ
Trigger: CTGCAGGCAATATTTTATCCAGTTCAGGGCCAGGAG...AACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR CCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCTCCTGGCCCTGAACTaGATAAAATATTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSLLALN*IKYCLQ
Trigger: CTGCAGGCAATATTTTATCCAGTTCAGGGCCAGGAG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACCAAATAACTCTCACTTaGGCCTGTGGGCTCGTGAAC +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNQITLT*ACGLVN
Trigger: GTTCACGAGCCCACAGGCCCAAGTGAGAGTTATTTG...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTCCTTGGGCCGGACCCTaGAGTGCCGCCTGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSPWAGP*SAAWPA
Trigger: CGCTGGCCAGGCGGCACTCCAGGGTCCGGCCCAAGG...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACCTCCTGCTCTGTCAGTaGGGTCAAGACCATCTCATT +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNLLLCQ*GQDHLI
Trigger: AATGAGATGGTCTTGACCCCACTGACAGAGCAGGAG...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGGAGGGGTCCTCATCCTaGTTGCAAAACAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMEGSSS*LQNRRW
Trigger: CCATCTCCTGTTTTGCAACCAGGATGAGGACCCCTC...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGAGTAATCCACGGAGATaGAGGGGTCCTCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMSNPRR*RGPHPG
Trigger: ACCAGGATGAGGACCCCTCCATCTCCGTGGATTACT...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACATCCTCACCCACCAGTaGGGTAACTTTCCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNILTHQ*GNFPSN
Trigger: ATTGCTGGGAAAGTTACCCCACTGGTGGGTGAGGAT...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACTTGGTTGGTATCAGCTaGCCCCTCATACCCACCATA +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNLVGIS*PLIPTI
Trigger: TATGGTGGGTATGAGGGGCCAGCTGATACCAACCAA...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACACCCTCTTGCCATATTaGAAGCCAAGGTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNTLLPY*KPRWLI
Trigger: GATGAGCCACCTTGGCTTCCAATATGGCAAGAGGGT...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGGAACACTCTGCAGGATaGGCAACATCTGGACAATGG +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMEHSAG*ATSGQW
Trigger: CCATTGTCCAGATGTTGCTCATCCTGCAGAGTGTTC...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTAGAATCCTCTGCCTATaGGGCAAACTGGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSRILCL*GKLGLP
Trigger: GGGGAGACCCAGTTTGCCTCATAGGCAGAGGATTCT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTAGGGAGCTCCGTGCTTaGGTTTCTCTCACACAACGG +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSRELRA*VSLTQR
Trigger: CCGTTGTGTGAGAGAAACGCAAGCACGGAGCTCCCT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378867.7
CDS-3UTR GCA 90 bp CATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAGGACAACTGGATAAAATATTaGCTGCAGGGTAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: HLIQWPADCGYRGGIVQDNWIKY*LQGRES
Trigger: ACTCTCCCTACCCTGCAGGCAATATTTTATCCAGTT...GTCCTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR GCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCATTGGCCACCGTGTaGCGCCGCACGCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAALATV*RRTLPH
Trigger: GTGTGGCAGCGTGCGGCGGCACACGGTGGCCAATGC...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGAGCCAAAGGCCTCTGTaGAAGCAGCACATAGGATCT +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMSQRPL*KQHIGS
Trigger: AGATCCTATGTGCTGCTTGCACAGAGGCCTTTGGCT...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTCCTTCCAAAAGGTCCTaGCCACATCTCCCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSPSKRS*PHLPSL
Trigger: GAGAGAGGGGAGATGTGGGCAGGACCTTTTGGAAGG...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCCTCCCAGCACCCTCTTaGCATATTGGAAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGLPAPS*HIGSQG
Trigger: ACCTTGGCTTCCAATATGGCAAGAGGGTGCTGGGAG...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCAGGATGAGCAACATCTaGACAATGGACGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGRMSNI*TMDEGS
Trigger: GCTGCCCTCGTCCATTGTCCAGATGTTGCTCATCCT...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTGGTCACTACAATTGGTaGCTACAAAGAAGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSGHYNW*LQRSGH
Trigger: GTGACCACTTCTTTGTAGCCACCAATTGTAGTGACC...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCGGATCTGAGTCAGGCTaGCAAGGCTGGAGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGGSESG*QGWSQK
Trigger: TTTCTGACTCCAGCCTTGCCAGCCTGACTCAGATCC...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACAACGTAGCCAACACCTaGTCTGGTTTCTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNNVANT*SGFFFQ
Trigger: CTGGAAGAAGAAACCAGACCAGGTGTTGGCTACGTT...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530639.6
CDS-3UTR TCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCGGTCATAAGTCCTGGTaGCAGTTCAGCTTCACCTCT +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGGHKSW*QFSFTS
Trigger: AGAGGTGAAGCTGAACTGTCACCAGGACTTATGACC...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGCACCTTCACACAGCTTaGTCTTCTCCTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMHLHTA*SSPPQR
Trigger: TCTTTGTGGAGGAGAAGATCAAGCTGTGTGAAGGTG...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTGGGCCTGTGGGCTCGTaGACACTCTGCAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASGPVGS*TLCRMS
Trigger: GCTCATCCTGCAGAGTGTTCACGAGCCCACAGGCCC...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTCGTGTACGTGGGGCCTaGGAAGCTACGGTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPARVRGA*EATVPA
Trigger: AGCGGGGACCGTAGCTTCTCAGGCCCCACGTACACG...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCTTGTGTTTTTAGTGTaGAGACTCACCCCACTGAAA +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSLVFLV*RLTPLK
Trigger: TTTCAGTGGGGTGAGTCTTCACACTAAAAACACAAG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTTGGAAACAGACAACATaGAAGGTTTCTGTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSWKQTT*KVSVSS
Trigger: TGAGCTCACAGAAACCTTTCATGTTGTCTGTTTCCA...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGAAAGGAGAAACCACTTaGTTCACCAGCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMKGETT*FTSSSS
Trigger: ACTGGAGGAGCTGGTGAAGCAAGTGGTTTCTCCTTT...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTTGTGCCGCCGCACGCTaGCACACTTCTCCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASCAAAR*HTSPGR
Trigger: CCTACCTGGAGAAGTGTGGCAGCGTGCGGCGGCACA...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCAGCCAAAGGCCTCTGTaGAAGCAGCACATAGGATCT +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGSQRPL*KQHIGS
Trigger: AGATCCTATGTGCTGCTTGCACAGAGGCCTTTGGCT...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTGCCTGCCGAGCTGCTTaGAATCGGGGAAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASACRAA*NRGRSL
Trigger: CAGCGACCTTCCCCGATTCCAAGCAGCTCGGCAGGC...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGCTCCTGGCCCTGAACTaGATAAAATATTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMLLALN*IKYCLQ
Trigger: CTGCAGGCAATATTTTATCCAGTTCAGGGCCAGGAG...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTTCAGGACAGTCACCTTaGGCCGGACCCTGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASSGQSP*AGPWSA
Trigger: GGCACTCCAGGGTCCGGCCCAAGGTGACTGTCCTGA...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTGACCATCTCATTCAGTaGCCGGCTGACTGCGGTTAT +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSDHLIQ*PADCGY
Trigger: ATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTC...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTACTTGTTCTCACTGCTaGCCTCCTCCCCCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASTCSHC*PPPPGP
Trigger: CGGGCCTGGGGGAGGAGGCCAGCAGTGAGAACAAGT...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACCATTGGATATGTCATTaGGAGCATCAGGCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNHWICH*EHQAVQ
Trigger: TTGGACTGCCTGATGCTCCCAATGACATATCCAATG...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACAGGCCAACACATCCTTaGTGGTTATATGTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNRPTHP*WLYVLS
Trigger: GGACAACACATATAACCACCAAGGATGTGTTGGCCT...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACTTACACAAGCCATTGTaGGTTCAAGTCCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNLHKPL*VQVQLL
Trigger: AAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAA...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGAAGGTCTCATCACCGTaGCAGCTTAGACTGATCTTC +
Preference number: 4 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMKVSSP*QLRLIF
Trigger: GAAGATCAGTCTAAGCTGCCACGGTGATGAGACCTT...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTGGTCATAAGTCCTGGTaGCAGTTCAGCTTCACCTCT +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSGHKSW*QFSFTS
Trigger: AGAGGTGAAGCTGAACTGTCACCAGGACTTATGACC...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTCGTGTACGTGGGGCCTaGGAAGCTACGGTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSRVRGA*EATVPA
Trigger: AGCGGGGACCGTAGCTTCTCAGGCCCCACGTACACG...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCCCCCTTAGGTCATTTTaGCCAGGACAGTACCCTAAA +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGPLRSF*PGQYPK
Trigger: TTTAGGGTACTGTCCTGGTCAAAATGACCTAAGGGG...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTTCACTTGAAGAGTCATaGTTGCTTCCTGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSSLEES*LLPVIK
Trigger: TTTGATGACAGGAAGCAATCATGACTCTTCAAGTGA...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACCATGAAAGGTTTCTGTaGGCTCACTTGAAGAGTCAT +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNHERFL*AHLKSH
Trigger: ATGACTCTTCAAGTGAGCTCACAGAAACCTTTCATG...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACTGGAAACAGACAACATaGAAGGTTTCTGTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNWKQTT*KVSVSS
Trigger: TGAGCTCACAGAAACCTTTCATGTTGTCTGTTTCCA...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp GGTCAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAAAAGAACAGTCCTTTTaGAAGAAGCTGGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: GQDHLIQWPADCGYRGGIKEQSF*KKLVLK
Trigger: TTTCAGAACCAGCTTCTTGCAAAAGGACTGTTCTTT...TATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR GCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTAAGGATGCAGCACCGTaGCAAGGCCTGCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAKDAAP*QGLLPP
Trigger: TGGGGGCAGCAGGCCTTGGCACGGTGCTGCATCCTT...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTGCACGCATGCACATATaGTTAACCTTACAAACTGAA +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSARMHI*LTLQTE
Trigger: TTCAGTTTGTAAGGTTAAGCATATGTGCATGCGTGC...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTGGGCAGGTCCCACCTTaGTGGGGAGAGGTGAATGAC +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASGQVPP*WGEVND
Trigger: GTCATTCACCTCTCCCCAGCAAGGTGGGACCTGCCC...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530639.6
CDS-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTTGGCCAGCGTGTACGTaGGGCCTGAGAAGCTACGGT +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASWPACT*GLRSYG
Trigger: ACCGTAGCTTCTCAGGCCCCACGTACACGCTGGCCA...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTTGTCCGAGTGGGCATTaGCCACCGTGTGCCGCCGCA +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSCPSGH*PPCAAA
Trigger: TGCGGCGGCACACGGTGGCCAATGCCCACTCGGACA...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCTCACTCTACACAAAATaGGGGAGAGGAGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGSLYTK*GRGVPS
Trigger: AGAGGGAACTCCTCTCCCCCATTTTGTGTAGAGTGA...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTTATTGGAAGCCAAGGTaGCTCATCTCTTTGAGATTT +
Preference number: 4 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSYWKPR*LISLRF
Trigger: AAATCTCAAAGAGATGAGCCACCTTGGCTTCCAATA...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTACCCTCTTGCCATATTaGAAGCCAAGGTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSTLLPY*KPRWLI
Trigger: GATGAGCCACCTTGGCTTCCAATATGGCAAGAGGGT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACTCAGCAGATCTCTTTTaGACATTTCTCTCCCATCAC +
Preference number: 4 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNSADLF*TFLSHH
Trigger: GTGATGGGAGAGAAATGTCCAAAAGAGATCTGCTGA...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGGGCGCAGAGATCTCTaGGCCTGGCTTGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAGRRDL*AWLATH
Trigger: GTGAGTGGCAAGCCAGGCCCAGAGATCTCTGCGCCC...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530639.6
CDS-3UTR TCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTCATTCAGTGGCCGGCTaGCTGCGGTTATCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSHSVAG*LRLSGR
Trigger: CCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATG...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTCGTCAGGGTTGTCAGTaGTGTTGGGCTCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASRQGCQ*CWAHWS
Trigger: GCTCCAGTGAGCCCAACATCACTGACAACCCTGACG...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCGAGAAAGTCCGTTTCTaGAATGAGAGAGACAAGAGG +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGEKVRF*NERDKR
Trigger: CCTCTTGTCTCTCTCATTTCAGAAACGGACTTTCTC...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTCAGAGCCTGCCGAGCTaGTTGGAATCGGGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAQSLPS*LESGKV
Trigger: GACCTTCCCCGATTCCAAGCAGCTCGGCAGGCTCTG...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTGAGCTGGAGCTCAGCTaGAGAGCCTGCCGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSELELS*RACRAA
Trigger: AGCAGCTCGGCAGGCTCTGCAGCTGAGCTCCAGCTC...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTGGCACTTGTTCTCACTaGTGGCCTCCTCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSGTCSH*WPPPPG
Trigger: GCCTGGGGGAGGAGGCCAGCAGTGAGAACAAGTGCC...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCCATTGGATATGTCATTaGGAGCATCAGGCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGHWICH*EHQAVQ
Trigger: TTGGACTGCCTGATGCTCCCAATGACATATCCAATG...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTGCCTATGAGGCAAACTaGGTCTCCCCACCCCAATGC +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASAYEAN*VSPPQC
Trigger: GCATTGGGGTGGGGAGACCCAGTTTGCCTCATAGGC...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTAACGCTGTTCCAGGCTaGGCTGGAGCTCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSNAVPG*AGAQLQ
Trigger: CTGCAGCTGAGCTCCAGCTCAGCCTGGAACAGCGTT...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTGGGTGGCGACTCAGCTaGGGGAAGCACAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSGWRLS*GKHSSA
Trigger: AGCTGAACTGTGCTTCCCTCAGCTGAGTCGCCACCC...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTTTATATGTGTTGTCCTaGCAACCTCCTGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSLYVLS*QPPAPE
Trigger: TTCTGGAGCAGGAGGTTGTCAGGACAACACATATAA...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTTTCCCAGAGCCCTGCTaGGTAGGGGCTTCAGGCTAT +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAFPEPC*VGASGY
Trigger: ATAGCCTGAAGCCCCTACTCAGCAGGGCTCTGGGAA...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCCTTGTGTTTTTAGTGTaGAGACTCACCCCACTGAAA +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGLVFLV*RLTPLK
Trigger: TTTCAGTGGGGTGAGTCTTCACACTAAAAACACAAG...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTAGAGCTCTGTaGCCTAACAGCCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAASRAL*PNSPAH
Trigger: GTGGGCAGGGCTGTTAGGTCACAGAGCTCTAGAAGC...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTCCAGAAGGTTCCGAATaGCCTCGGAAAGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASPEGSE*PRKGLL
Trigger: GAGAAGCCCTTTCCGAGGGCATTCGGAACCTTCTGG...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCAACTGGATAAAATATTaGCTGCAGGGTAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGNWIKY*LQGRES
Trigger: ACTCTCCCTACCCTGCAGGCAATATTTTATCCAGTT...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTAGCTGGATGTCCGAGTaGGCATTGGCCACCGTGTGC +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSSWMSE*ALATVC
Trigger: GCACACGGTGGCCAATGCCCACTCGGACATCCAGCT...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTGCCATGGCCAGCAGCTaGATGTCCGAGTGGGCATTG +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSAMASS*MSEWAL
Trigger: CAATGCCCACTCGGACATCCAGCTGCTGGCCATGGC...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCCTATGAGGCAAACTaGGTCTCCCCACCCCAATGC +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAAYEAN*VSPPQC
Trigger: GCATTGGGGTGGGGAGACCCAGTTTGCCTCATAGGC...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTCGTGGCAGCTTAGACTaGTCTTCACCTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPARGSLD*SSPSPS
Trigger: GCTGGGAGAAGGTGAAGATCAGTCTAAGCTGCCACG...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTAATTGCCGAGGAGGATaGAGCAGGTCAAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPANCRGG*SRSREL
Trigger: GAGCTCCCTTGACCTGCTGCATCCTCCTCGGCAATT...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378867.7
CDS-3UTR GCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGGGCATAGAGCTCGTTaGTTTGCAAGCCACCCCCTT +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAGHRAR*FASHPL
Trigger: AAGGGGGTGGCTTGCAAAGCAACGAGCTCTATGCCC...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTACATTCCATTTTCCATaGTTCCTGGAGAATCCTCTG +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSTFHFP*FLENPL
Trigger: CAGAGGATTCTCCAGGAAGCATGGAAAATGGAATGT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTGGAGCAGTAGAAGGATaGAGCACCGTGCCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSGAVEG*STVPRP
Trigger: AGGCCTTGGCACGGTGCTGCATCCTTCTACTGCTCC...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTAGGATGAGCAACATCTaGACAATGGACGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASRMSNI*TMDEGS
Trigger: GCTGCCCTCGTCCATTGTCCAGATGTTGCTCATCCT...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTGACCATCTCATTCAGTaGCCGGCTGACTGCGGTTAT +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASDHLIQ*PADCGY
Trigger: ATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTC...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTAGTAATCCACGGAGATaGAGGGGTCCTCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASSNPRR*RGPHPG
Trigger: ACCAGGATGAGGACCCCTCCATCTCCGTGGATTACT...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTAAATGCCAGGAGCATTaGATATGTCATTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSKCQEH*ICHWEH
Trigger: ATGCTCCCAATGACATATCCAATGCTCCTGGCATTT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTTCAGCAGATCTCTTTTaGACATTTCTCTCCCATCAC +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSSADLF*TFLSHH
Trigger: GTGATGGGAGAGAAATGTCCAAAAGAGATCTGCTGA...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTCAGGTCCCACCTTGCTaGGGAGAGGTGAATGACCAT +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAQVPPC*GEVNDH
Trigger: ATGGTCATTCACCTCTCCCCAGCAAGGTGGGACCTG...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530639.6
CDS-3UTR TCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTTCACTTGAAGAGTCATaGTTGCTTCCTGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSSLEES*LLPVIK
Trigger: TTTGATGACAGGAAGCAATCATGACTCTTCAAGTGA...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCAAAGAACAGTCCTTTTaGAAGAAGCTGGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGKEQSF*KKLVLK
Trigger: TTTCAGAACCAGCTTCTTGCAAAAGGACTGTTCTTT...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTTCTCACTTGGGCCTGTaGGCTCGTGAACACTCTGCA +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSSHLGL*AREHSA
Trigger: TGCAGAGTGTTCACGAGCCCACAGGCCCAAGTGAGA...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGAACACTCTGCAGGATaGGCAACATCTGGACAATGG +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAEHSAG*ATSGQW
Trigger: CCATTGTCCAGATGTTGCTCATCCTGCAGAGTGTTC...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTAGTCCGTTTCTGAAATaGGAGAGACAAGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASSPFLK*ERQEAP
Trigger: TGGTGCCTCTTGTCTCTCTCATTTCAGAAACGGACT...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTAAAGAACAGTCCTTTTaGAAGAAGCTGGTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSKEQSF*KKLVLK
Trigger: TTTCAGAACCAGCTTCTTGCAAAAGGACTGTTCTTT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTAAAGGAGAAACCACTTaGTTCACCAGCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASKGETT*FTSSSS
Trigger: ACTGGAGGAGCTGGTGAAGCAAGTGGTTTCTCCTTT...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTCTCCTGCTCCAGAAATaGCAGGAGCATTGGATATGT +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASLLLQK*QEHWIC
Trigger: ACATATCCAATGCTCCTGGCATTTCTGGAGCAGGAG...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTCTCCCAGCACCCTCTTaGCATATTGGAAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSLPAPS*HIGSQG
Trigger: ACCTTGGCTTCCAATATGGCAAGAGGGTGCTGGGAG...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTTTGGTTGGTATCAGCTaGCCCCTCATACCCACCATA +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPALVGIS*PLIPTI
Trigger: TATGGTGGGTATGAGGGGCCAGCTGATACCAACCAA...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTAAGGTCTCATCACCGTaGCAGCTTAGACTGATCTTC +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASKVSSP*QLRLIF
Trigger: GAAGATCAGTCTAAGCTGCCACGGTGATGAGACCTT...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTGAGAAAGTCCGTTTCTaGAATGAGAGAGACAAGAGG +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASEKVRF*NERDKR
Trigger: CCTCTTGTCTCTCTCATTTCAGAAACGGACTTTCTC...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTTGGAGCTGTTATCAGTaGGACCGACAACTACAAAGA +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASWSCYQ*DRQLQR
Trigger: TCTTTGTAGTTGTCGGTCTCACTGATAACAGCTCCA...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTCAAATAACTCTCACTTaGGCCTGTGGGCTCGTGAAC +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSQITLT*ACGLVN
Trigger: GTTCACGAGCCCACAGGCCCAAGTGAGAGTTATTTG...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTCTCCTGCTCTGTCAGTaGGGTCAAGACCATCTCATT +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSLLLCQ*GQDHLI
Trigger: AATGAGATGGTCTTGACCCCACTGACAGAGCAGGAG...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTGGTCACTACAATTGGTaGCTACAAAGAAGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASGHYNW*LQRSGH
Trigger: GTGACCACTTCTTTGTAGCCACCAATTGTAGTGACC...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTAGGCCAACACATCCTTaGTGGTTATATGTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASRPTHP*WLYVLS
Trigger: GGACAACACATATAACCACCAAGGATGTGTTGGCCT...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTTTACACAAGCCATTGTaGGTTCAAGTCCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASLHKPL*VQVQLL
Trigger: AAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAA...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR CAA 72 bp CTAGAAACCATGAAATTTACGAATTTACACAAGCCATaGTGGGTTCAAGTCCAGCTGCTTCTAGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LETMKFTNLHKP*WVQVQLLLELC
Trigger: ACAGAGCTCTAGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTCACCTTCACACAGCTTaGTCTTCTCCTCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSHLHTA*SSPPQR
Trigger: TCTTTGTGGAGGAGAAGATCAAGCTGTGTGAAGGTG...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR TCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTTGGAGCTGTTATCAGTaGGACCGACAACTACAAAGA +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAWSCYQ*DRQLQR
Trigger: TCTTTGTAGTTGTCGGTCTCACTGATAACAGCTCCA...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTTCACTCTACACAAAATaGGGGAGAGGAGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSSLYTK*GRGVPS
Trigger: AGAGGGAACTCCTCTCCCCCATTTTGTGTAGAGTGA...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTCTAGGAGAGAAAAAGTaGTTAAGGACACCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPALGEKK*LRTPQL
Trigger: GAGCTGAGGTGTCCTTAACCACTTTTTCTCTCCTAG...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTCAGCCAGAACCTCAATaGGATTTTCACCTTCACACA +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSQPEPQ*DFHLHT
Trigger: TGTGTGAAGGTGAAAATCGCATTGAGGTTCTGGCTG...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTAACTGGATAAAATATTaGCTGCAGGGTAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPANWIKY*LQGRES
Trigger: ACTCTCCCTACCCTGCAGGCAATATTTTATCCAGTT...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTACATTCCATTTTCCATaGTTCCTGGAGAATCCTCTG +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPATFHFP*FLENPL
Trigger: CAGAGGATTCTCCAGGAAGCATGGAAAATGGAATGT...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTACTGGTCACTACAATTaGTGGCTACAAAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPATGHYN*WLQRSG
Trigger: ACCACTTCTTTGTAGCCACCAATTGTAGTGACCAGT...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR GCA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCACGCATGCACATATaGTTAACCTTACAAACTGAA +
Preference number: 4 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAARMHI*LTLQTE
Trigger: TTCAGTTTGTAAGGTTAAGCATATGTGCATGCGTGC...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CCA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTACTGGTCACTACAATTaGTGGCTACAAAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSTGHYN*WLQRSG
Trigger: ACCACTTCTTTGTAGCCACCAATTGTAGTGACCAGT...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
3UTR CAA 72 bp CATAAATTATCATGTTGCTACCTACTGATGCTCCATTaGCTAATGCATGTTAGTCAGTCTGTAGACTTTATC +
Preference number: 4 (lower is better)
Translates to: HKLSCCYLLMLH*LMHVSQSVDFI
Trigger: GATAAAGTCTACAGACTGACTAACATGCATTAGCAAATGGAGCATCAGTAGGTAGCAACATGATAATTTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS GCA 90 bp CTGCCCAGCTCTCCCTCCCTCCGTCCCTCCCTCCTCCCCCAGCTCTaGCCTCAGATGGGGTCCCGTCCAGCCTCGGTTCCTCTCCAGCGC +
Preference number: 5 (lower is better)
Translates to: LPSSPSLRPSLLPQL*PQMGSRPASVPLQR
Trigger: GCGCTGGAGAGGAACCGAGGCTGGACGGGACCCCATCTGAGGGCAGAGCTGGGGGAGGAGGGAGGGACGGAGGGAGGGAGAGCTGGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000526682.5
ENST00000527751.5
ENST00000530252.1
ENST00000532843.1
CDS CCA 90 bp TCCTCCCCCAGGCCCGAGTGCATCATGGTGGCCATGGCCAGCAGCTaGATGTCCGAGTGGGCATTGGCCACCGTGTGCCGCCGCACGCTG +
Preference number: 5 (lower is better)
Translates to: SSPRPECIMVAMASS*MSEWALATVCRRTL
Trigger: CAGCGTGCGGCGGCACACGGTGGCCAATGCCCACTCGGACATCCAGCTGCTGGCCATGGCCACCATGATGCACTCGGGCCTGGGGGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 90 bp CACTGCTGGCCTCCTCCCCCAGGCCCGAGTGCATCATGGTGGCCATaGCCAGCAGCTGGATGTCCGAGTGGGCATTGGCCACCGTGTGCC +
Preference number: 5 (lower is better)
Translates to: HCWPPPPGPSASWWP*PAAGCPSGHWPPCA
Trigger: GGCACACGGTGGCCAATGCCCACTCGGACATCCAGCTGCTGGCCATGGCCACCATGATGCACTCGGGCCTGGGGGAGGAGGCCAGCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 90 bp CCCGAGTGCATCATGGTGGCCATGGCCAGCAGCTGGATGTCCGAGTaGGCATTGGCCACCGTGTGCCGCCGCACGCTGCCACACTTCTCC +
Preference number: 5 (lower is better)
Translates to: PECIMVAMASSWMSE*ALATVCRRTLPHFS
Trigger: GGAGAAGTGTGGCAGCGTGCGGCGGCACACGGTGGCCAATGCCCACTCGGACATCCAGCTGCTGGCCATGGCCACCATGATGCACTCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 90 bp GGGCGCGTGGGTGCAGTGCGGAGCCCCGGGAATAAACCGCTTCTCTaGCTCTGGTCACCTACCCTGCGGGTGACCTGGAGACCAGGACGA +
Preference number: 5 (lower is better)
Translates to: GRVGAVRSPGNKPLL*LWSPTLRVTWRPGR
Trigger: TCGTCCTGGTCTCCAGGTCACCCGCAGGGTAGGTGACCAGAGCCAGAGAAGCGGTTTATTCCCGGGGCTCCGCACTGCACCCACGCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529020.1
CDS GCA 90 bp GCTGGATGTCCGAGTGGGCATTGGCCACCGTGTGCCGCCGCACGCTaGCACACTTCTCCAGGTAGGCTTCCCCCTCCTGCTCTGTCAGTG +
Preference number: 5 (lower is better)
Translates to: AGCPSGHWPPCAAAR*HTSPGRLPPPALSV
Trigger: CACTGACAGAGCAGGAGGGGGAAGCCTACCTGGAGAAGTGTGGCAGCGTGCGGCGGCACACGGTGGCCAATGCCCACTCGGACATCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 90 bp GCATCATGGTGGCCATGGCCAGCAGCTGGATGTCCGAGTGGGCATTaGCCACCGTGTGCCGCCGCACGCTGCCACACTTCTCCAGGTAGG +
Preference number: 5 (lower is better)
Translates to: ASWWPWPAAGCPSGH*PPCAAARCHTSPGR
Trigger: CCTACCTGGAGAAGTGTGGCAGCGTGCGGCGGCACACGGTGGCCAATGCCCACTCGGACATCCAGCTGCTGGCCATGGCCACCATGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 90 bp TGTTCTCACTGCTGGCCTCCTCCCCCAGGCCCGAGTGCATCATGGTaGCCATGGCCAGCAGCTGGATGTCCGAGTGGGCATTGGCCACCG +
Preference number: 5 (lower is better)
Translates to: CSHCWPPPPGPSASW*PWPAAGCPSGHWPP
Trigger: CGGTGGCCAATGCCCACTCGGACATCCAGCTGCTGGCCATGGCCACCATGATGCACTCGGGCCTGGGGGAGGAGGCCAGCAGTGAGAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS GCA 90 bp AGCAGGCACTTGTTCTCACTGCTGGCCTCCTCCCCCAGGCCCGAGTaGATCATGGTGGCCATGGCCAGCAGCTGGATGTCCGAGTGGGCA +
Preference number: 5 (lower is better)
Translates to: SRHLFSLLASSPRPE*IMVAMASSWMSEWA
Trigger: TGCCCACTCGGACATCCAGCTGCTGGCCATGGCCACCATGATGCACTCGGGCCTGGGGGAGGAGGCCAGCAGTGAGAACAAGTGCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 90 bp GTGGGTGCAGTGCGGAGCCCCGGGAATAAACCGCTTCTCTGGCTCTaGTCACCTACCCTGCGGGTGACCTGGAGACCAGGACGAGGTCTG +
Preference number: 5 (lower is better)
Translates to: VGAVRSPGNKPLLWL*SPTLRVTWRPGRGL
Trigger: CAGACCTCGTCCTGGTCTCCAGGTCACCCGCAGGGTAGGTGACCAGAGCCAGAGAAGCGGTTTATTCCCGGGGCTCCGCACTGCACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529020.1
CDS CCA 90 bp CACCTCCGGAGAATCCTCGTGCAGTCAAACACAGGCGCGGGCGCGTaGGTGCAGTGCGGAGCCCCGGGAATAAACCGCTTCTCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: HLRRILVQSNTGAGA*VQCGAPGINRFSGS
Trigger: AGAGCCAGAGAAGCGGTTTATTCCCGGGGCTCCGCACTGCACCCACGCGCCCGCGCCTGTGTTTGACTGCACGAGGATTCTCCGGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529020.1
CDS CCA 90 bp ACTTGTTCTCACTGCTGGCCTCCTCCCCCAGGCCCGAGTGCATCATaGTGGCCATGGCCAGCAGCTGGATGTCCGAGTGGGCATTGGCCA +
Preference number: 5 (lower is better)
Translates to: TCSHCWPPPPGPSAS*WPWPAAGCPSGHWP
Trigger: TGGCCAATGCCCACTCGGACATCCAGCTGCTGGCCATGGCCACCATGATGCACTCGGGCCTGGGGGAGGAGGCCAGCAGTGAGAACAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS TCA 90 bp GCCTGGCCAGCGTGTACGTGGGGCCTGAGAAGCTACGGTCCCCGCTaGTGCCGAGGAAAGGAGAAACCACTTGCTTCACCAGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: AWPACTWGLRSYGPR*CRGKEKPLASPAPP
Trigger: TGGAGGAGCTGGTGAAGCAAGTGGTTTCTCCTTTCCTCGGCATCAGCGGGGACCGTAGCTTCTCAGGCCCCACGTACACGCTGGCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000530639.6
CDS GCA 90 bp GGCTGGCTCCTGTCCCCGTCCACTTCTCAGTTAGTGTTCCCAGGCTaGCTAGTCCAGCAAAGCGCCTGGGCAGCCACAACCACGCACTCA +
Preference number: 5 (lower is better)
Translates to: GWLLSPSTSQLVFPG*LVQQSAWAATTTHS
Trigger: TGAGTGCGTGGTTGTGGCTGCCCAGGCGCTTTGCTGGACTAGGCAGCCTGGGAACACTAACTGAGAAGTGGACGGGGACAGGAGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526679.1
CDS GCA 90 bp AGAATCCTCGTGCAGTCAAACACAGGCGCGGGCGCGTGGGTGCAGTaGGGAGCCCCGGGAATAAACCGCTTCTCTGGCTCTGGTCACCTA +
Preference number: 5 (lower is better)
Translates to: RILVQSNTGAGAWVQ*GAPGINRFSGSGHL
Trigger: TAGGTGACCAGAGCCAGAGAAGCGGTTTATTCCCGGGGCTCCGCACTGCACCCACGCGCCCGCGCCTGTGTTTGACTGCACGAGGATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529020.1
CDS CCA 90 bp CTTCCCGAGGAAGTTTTCTCACCGGAGAGAAATGAGCGACCTGGATaGTTCTCCCCGTCGCGCTCTGCCCAGCTCTCCCTCCCTCCGTCC +
Preference number: 5 (lower is better)
Translates to: LPEEVFSPERNERPG*FSPSRSAQLSLPPS
Trigger: GGACGGAGGGAGGGAGAGCTGGGCAGAGCGCGACGGGGAGAACCATCCAGGTCGCTCATTTCTCTCCGGTGAGAAAACTTCCTCGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526682.5
ENST00000527751.5
ENST00000530252.1
ENST00000532843.1
CDS CCA 90 bp CTGGAGTGCCGCCTGGCAGGAGCCCTGCTGAACACTGGCATTCACTaGCATTCATCCCCTGCACCGGAGCCAGCAAGAGCAGCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: LECRLAGALLNTGIH*HSSPAPEPARAAPF
Trigger: GAAAGGAGCTGCTCTTGCTGGCTCCGGTGCAGGGGATGAATGCCAGTGAATGCCAGTGTTCAGCAGGGCTCCTGCCAGGCGGCACTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530627.1
CDS CCA 90 bp GAGCTCATGAAGCGCGGTCTAGGCCTGCGGAAGGAGCCCATCTTGTaGAACTCGACGGGCAGAATGGGAGCGAAGCCGCGGGTCATAAGT +
Preference number: 5 (lower is better)
Translates to: ELMKRGLGLRKEPIL*NSTGRMGAKPRVIS
Trigger: ACTTATGACCCGCGGCTTCGCTCCCATTCTGCCCGTCGAGTTCCACAAGATGGGCTCCTTCCGCAGGCCTAGACCGCGCTTCATGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000378867.7
ENST00000524380.5
ENST00000526679.1
ENST00000526682.5
ENST00000526728.5
ENST00000527172.5
ENST00000527487.1
ENST00000529034.5
ENST00000530050.5
ENST00000530252.1
ENST00000530639.6
ENST00000532121.5
CDS-3UTR CAA 90 bp CATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAGGACATGGACGAGGGCAGCTaGGACTGGGCCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: HLIQWPADCGYRGGIVQDMDEGS*DWASSS
Trigger: GCTGCTGCTGGCCCAGTCCAAGCTGCCCTCGTCCAT...GTCCTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS GCA 90 bp CCTGGTGACAGTTCAGCTTCACCTCTAGGACCAGAAGGTTCCGAATaGCCTCGGAAAGGGCTTCTCCAGGGGCTGCCTTCAGGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: PGDSSASPLGPEGSE*PRKGLLQGLPSGPQ
Trigger: CTGAGGGCCTGAAGGCAGCCCCTGGAGAAGCCCTTTCCGAGGGCATTCGGAACCTTCTGGTCCTAGAGGTGAAGCTGAACTGTCACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000378867.7
ENST00000524380.5
ENST00000526679.1
ENST00000526682.5
ENST00000526728.5
ENST00000527172.5
ENST00000529034.5
ENST00000530050.5
ENST00000530252.1
ENST00000530639.6
ENST00000532121.5
CDS CCA 90 bp CAACACCTGGTCTGGTTTCTTCTTCCAGGGCAGGTCCCACCTTGCTaGGGAGAGGTGAATGACCATGGCCTTCCAGCCTCCCGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: QHLVWFLLPGQVPPC*GEVNDHGLPASREG
Trigger: CCCTTCTCGGGAGGCTGGAAGGCCATGGTCATTCACCTCTCCCCAGCAAGGTGGGACCTGCCCTGGAAGAAGAAACCAGACCAGGTGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529034.5
ENST00000530639.6
CDS CCA 90 bp CATGCCCTTGATGTTTCTCTTTATGTCCGAATTGCCTCTTCTCCTTaGGGTCCCCGGCGTGAATCACCCCGAGTCGCGCACACCCGCCGC +
Preference number: 5 (lower is better)
Translates to: HALDVSLYVRIASSP*GPRRESPRVAHTRR
Trigger: GCGGCGGGTGTGCGCGACTCGGGGTGATTCACGCCGGGGACCCCAAGGAGAAGAGGCAATTCGGACATAAAGAGAAACATCAAGGGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000524380.5
ENST00000526682.5
ENST00000527751.5
ENST00000532578.1
CDS-3UTR CAA 90 bp GACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAGTTCAGGACAGTCACCTaGGGCCGGACCCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: DHLIQWPADCGYRGGIVQFRTVT*GRTLEC
Trigger: GCACTCCAGGGTCCGGCCCAAGGTGACTGTCCTGAA...CTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR CAA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACATGTCCGAGTGGGCATaGGCCACCGTGTGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNMSEWA*ATVCRR
Trigger: GCGGCGGCACACGGTGGCCAATGCCCACTCGGACAT...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS TCA 90 bp CTCGACGGGCAGAATGGGAGCGAAGCCGCGGGTCATAAGTCCTGGTaGCAGTTCAGCTTCACCTCTAGGACCAGAAGGTTCCGAATGCCC +
Preference number: 5 (lower is better)
Translates to: LDGQNGSEAAGHKSW*QFSFTSRTRRFRMP
Trigger: GGGCATTCGGAACCTTCTGGTCCTAGAGGTGAAGCTGAACTGTCACCAGGACTTATGACCCGCGGCTTCGCTCCCATTCTGCCCGTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000378867.7
ENST00000524380.5
ENST00000526679.1
ENST00000526682.5
ENST00000526728.5
ENST00000527172.5
ENST00000527487.1
ENST00000529034.5
ENST00000530050.5
ENST00000530252.1
ENST00000530639.6
ENST00000532121.5
CDS GCA 90 bp CTCTGTCAGTGGGGTCAAGACCATCTCATTCAGTGGCCGGCTGACTaGGGTTATCGGGGAGGCATAGTTCAGGACAGTCACCTTGGGCCG +
Preference number: 5 (lower is better)
Translates to: LCQWGQDHLIQWPAD*GYRGGIVQDSHLGP
Trigger: CGGCCCAAGGTGACTGTCCTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTGACCCCACTGACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS GCA 90 bp AGCCAACACCTGGTCTGGTTTCTTCTTCCAGGGCAGGTCCCACCTTaGTGGGGAGAGGTGAATGACCATGGCCTTCCAGCCTCCCGAGAA +
Preference number: 5 (lower is better)
Translates to: SQHLVWFLLPGQVPP*WGEVNDHGLPASRE
Trigger: TTCTCGGGAGGCTGGAAGGCCATGGTCATTCACCTCTCCCCAGCAAGGTGGGACCTGCCCTGGAAGAAGAAACCAGACCAGGTGTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529034.5
ENST00000530639.6
CDS GCA 90 bp GCACCGGAGCCAGCAAGAGCAGCTCCTTTCAAACCCCCAGAGAGATaGAAAGCCTGGATAAGGCCGTCCTCGGGTCCTTTGTTGGGGACT +
Preference number: 5 (lower is better)
Translates to: APEPARAAPFKPPER*KAWIRPSSGPLLGT
Trigger: AGTCCCCAACAAAGGACCCGAGGACGGCCTTATCCAGGCTTTGCATCTCTCTGGGGGTTTGAAAGGAGCTGCTCTTGCTGGCTCCGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530627.1
CDS CCA 90 bp GCTGCCACACTTCTCCAGGTAGGCTTCCCCCTCCTGCTCTGTCAGTaGGGTCAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTAT +
Preference number: 5 (lower is better)
Translates to: AATLLQVGFPLLLCQ*GQDHLIQWPADCGY
Trigger: ATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTGACCCCACTGACAGAGCAGGAGGGGGAAGCCTACCTGGAGAAGTGTGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 90 bp TCACTTGCTTCCCCTGTAAACCTGGGAACAGCAGTGTCTGCTCCATaGTCCAGCATCCAGCACCCCCAGCACCATACCCAGGACGAGGTC +
Preference number: 5 (lower is better)
Translates to: SLASPVNLGTAVSAP*SSIQHPQHHTQDEV
Trigger: GACCTCGTCCTGGGTATGGTGCTGGGGGTGCTGGATGCTGGACCATGGAGCAGACACTGCTGTTCCCAGGTTTACAGGGGAAGCAAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525672.1
CDS CCA 90 bp CAAAAGCTGGTCTGGTTTCTTCTTCCAGGGCAGGTCCCACCTTGCTaGGGAGAGGTGAATGACCATGGCCTTCCAGCCTCCCGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: QKLVWFLLPGQVPPC*GEVNDHGLPASREG
Trigger: CCCTTCTCGGGAGGCTGGAAGGCCATGGTCATTCACCTCTCCCCAGCAAGGTGGGACCTGCCCTGGAAGAAGAAACCAGACCAGCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531269.5
CDS TCA 90 bp CCTGCTCTGTCAGTGGGGTCAAGACCATCTCATTCAGTGGCCGGCTaGCTGCGGTTATCGGGGAGGCATAGTTCAGGACAGTCACCTTGG +
Preference number: 5 (lower is better)
Translates to: PALSVGSRPSHSVAG*LRLSGRHSSGQSPW
Trigger: CCAAGGTGACTGTCCTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTGACCCCACTGACAGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS TCA 90 bp TCTGGTTTCTTCTTCCAGGGCAGGTCCCACCTTGCTGGGGAGAGGTaGATGACCATGGCCTTCCAGCCTCCCGAGAAGGGGATGTTCCAA +
Preference number: 5 (lower is better)
Translates to: SGFFFQGRSHLAGER*MTMAFQPPEKGMFQ
Trigger: TTGGAACATCCCCTTCTCGGGAGGCTGGAAGGCCATGGTCATTCACCTCTCCCCAGCAAGGTGGGACCTGCCCTGGAAGAAGAAACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529034.5
ENST00000530639.6
ENST00000531269.5
CDS-3UTR CAA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCGGAAGGAGCCCATCTaGTGGAACTCGACGGGCAGA +
Preference number: 5 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSRKEPI*WNSTGR
Trigger: TCTGCCCGTCGAGTTCCACAAGATGGGCTCCTTCCG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCGGAAGGAGCCCATCTaGTGGAACTCGACGGGCAGA +
Preference number: 5 (lower is better)
Translates to: QDHLIQWPADCGYRGGIVRKEPI*WNSTGR
Trigger: TCTGCCCGTCGAGTTCCACAAGATGGGCTCCTTCCG...AACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR CAA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGATGGACGAGGGCAGCTaGGACTGGGCCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMMDEGS*DWASSS
Trigger: GCTGCTGCTGGCCCAGTCCAAGCTGCCCTCGTCCAT...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS GCA 90 bp AGACAAAAGCTGGTCTGGTTTCTTCTTCCAGGGCAGGTCCCACCTTaGTGGGGAGAGGTGAATGACCATGGCCTTCCAGCCTCCCGAGAA +
Preference number: 5 (lower is better)
Translates to: RQKLVWFLLPGQVPP*WGEVNDHGLPASRE
Trigger: TTCTCGGGAGGCTGGAAGGCCATGGTCATTCACCTCTCCCCAGCAAGGTGGGACCTGCCCTGGAAGAAGAAACCAGACCAGCTTTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531269.5
CDS CCA 90 bp ACATCCACTTCTCCAGGAAACTGTAAGACACTGAGGACCGCAGGCTaGCTCCTGTCCCCGTCCACTTCTCAGTTAGTGTTCCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: TSTSPGNCKTLRTAG*LLSPSTSQLVFPGC
Trigger: GCAGCCTGGGAACACTAACTGAGAAGTGGACGGGGACAGGAGCCAGCCTGCGGTCCTCAGTGTCTTACAGTTTCCTGGAGAAGTGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526679.1
CDS CCA 90 bp CCAGCAAGAGCAGCTCCTTTCAAACCCCCAGAGAGATGCAAAGCCTaGATAAGGCCGTCCTCGGGTCCTTTGTTGGGGACTTGGTTCCCA +
Preference number: 5 (lower is better)
Translates to: PARAAPFKPPERCKA*IRPSSGPLLGTWFP
Trigger: TGGGAACCAAGTCCCCAACAAAGGACCCGAGGACGGCCTTATCCAGGCTTTGCATCTCTCTGGGGGTTTGAAAGGAGCTGCTCTTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530627.1
CDS-3UTR CAA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTATGTCCGAGTGGGCATaGGCCACCGTGTGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSMSEWA*ATVCRR
Trigger: GCGGCGGCACACGGTGGCCAATGCCCACTCGGACAT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTGGGTTGTCAGTGATGTaGGGCTCACTGGAGCACTGC +
Preference number: 5 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSGLSVM*GSLEHC
Trigger: GCAGTGCTCCAGTGAGCCCAACATCACTGACAACCC...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCTGGGGGTGAGTTCCTaGAGCTTGAGAGGAAGCCTG +
Preference number: 5 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSLGVSS*SLRGSL
Trigger: CAGGCTTCCTCTCAAGCTCAAGGAACTCACCCCCAG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS GCA 90 bp TTAATCCTCACTTGCTTCCCCTGTAAACCTGGGAACAGCAGTGTCTaGTCCATGGTCCAGCATCCAGCACCCCCAGCACCATACCCAGGA +
Preference number: 5 (lower is better)
Translates to: LILTCFPCKPGNSSV*SMVQHPAPPAPYPG
Trigger: TCCTGGGTATGGTGCTGGGGGTGCTGGATGCTGGACCATGGAGCAGACACTGCTGTTCCCAGGTTTACAGGGGAAGCAAGTGAGGATTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525672.1
CDS-3UTR CAA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTAAGGGAGCTCCGTGCTaGCGTTTCTCTCACACAACG +
Preference number: 5 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSKGAPC*RFSHTT
Trigger: CGTTGTGTGAGAGAAACGCAAGCACGGAGCTCCCTT...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378867.7
CDS-3UTR CAA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTATGGACGAGGGCAGCTaGGACTGGGCCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSMDEGS*DWASSS
Trigger: GCTGCTGCTGGCCCAGTCCAAGCTGCCCTCGTCCAT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAGGACATAGAGCTCGTTGCTTaGCAAGCCACCCCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: HLIQWPADCGYRGGIVQDIELVA*QATPFE
Trigger: TTCAAAGGGGGTGGCTTGCAAAGCAACGAGCTCTAT...GTCCTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR CAA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTGCAAATAACTCTCACTaGGGCCTGTGGGCTCGTGAA +
Preference number: 5 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSANNSH*GLWARE
Trigger: TTCACGAGCCCACAGGCCCAAGTGAGAGTTATTTGC...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACTCCAGTCCGTCAGGGTaGTCAGTGATGTTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNSSPSG*SVMLGS
Trigger: TGAGCCCAACATCACTGACAACCCTGACGGACTGGA...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACGTGAGTTCCTTGAGCTaGAGAGGAAGCCTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNVSSLS*RGSLRG
Trigger: CCCTCTCAGGCTTCCTCTCAAGCTCAAGGAACTCAC...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACATACAGGCCAGTTGGTaGGTATCAGCTGGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNIQASW*VSAGPS
Trigger: TGAGGGGCCAGCTGATACCAACCAACTGGCCTGTAT...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTCACCCTCTTGCCATATaGGAAGCCAAGGTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSHPLAI*EAKVAH
Trigger: ATGAGCCACCTTGGCTTCCAATATGGCAAGAGGGTG...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTCGGAAGGAGCCCATCTaGTGGAACTCGACGGGCAGA +
Preference number: 5 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSRKEPI*WNSTGR
Trigger: TCTGCCCGTCGAGTTCCACAAGATGGGCTCCTTCCG...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTTGCAAGCCACCCCCTTaGAAAACGTTGATCACAGCA +
Preference number: 5 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSCKPPP*KTLITA
Trigger: TGCTGTGATCAACGTTTTCAAAGGGGGTGGCTTGCA...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTGGATCTGGATGTAGGTaGAGGATAGATCCTCACCCA +
Preference number: 5 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSGSGCR*RIDPHP
Trigger: TGGGTGAGGATCTATCCTCAACCTACATCCAGATCC...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS CCA 90 bp AACCACTTGCTTCACCAGCTCCTCCAGTTGCAAATAACTCTCACTTaGGCCTGTGGGCTCGTGAACACTCTGCAGGATGAGCAACATCTG +
Preference number: 5 (lower is better)
Translates to: NHLLHQLLQLQITLT*ACGLVNTLQDEQHL
Trigger: CAGATGTTGCTCATCCTGCAGAGTGTTCACGAGCCCACAGGCCCAAGTGAGAGTTATTTGCAACTGGAGGAGCTGGTGAAGCAAGTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CAAAAGGTCCTGCCCACATCTCCCCTCTCTCCCAGCACTGTAAAGCATGGAAACCACCAGCTCCTCCAGTaGCAAATAACTCTCACTTGG +
Preference number: 5 (lower is better)
Translates to: QKVLPTSPLSPSTVKHGNHQLLQ*QITLTW
Trigger: CCAAGTGAGAGTTATTTGCAACTGGAGGAGCTGGTG...GTTTCCATGCTTTACAGTGCTGGGAGAGAGGGGAGATGTGGGCAGGACCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCTCCAGTCCGTCAGGGTaGTCAGTGATGTTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGSSPSG*SVMLGS
Trigger: TGAGCCCAACATCACTGACAACCCTGACGGACTGGA...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTGAAATGCCAGGAGCATaGGATATGTCATTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSEMPGA*DMSLGA
Trigger: TGCTCCCAATGACATATCCAATGCTCCTGGCATTTC...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS TCA 90 bp GTAGCCATGCCGTCACATGGTCTTTCCTCTGTGCACTCATGCCCTTaGTGTTTCTCTTTATGTCCGAATTGCCTCTTCTCCTTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: VAMPSHGLSSVHSCP*CFSLCPNCLFSLGS
Trigger: GGACCCCAAGGAGAAGAGGCAATTCGGACATAAAGAGAAACATCAAGGGCATGAGTGCACAGAGGAAAGACCATGTGACGGCATGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000524380.5
ENST00000526682.5
ENST00000527751.5
ENST00000532578.1
CDS GCA 90 bp AGGGTTGATTTCCTTTGGGGTCTCTCTCCTTGGTTTACAGATGGCTaGCTTGTAGCCATGCCGTCACATGGTCTTTCCTCTGTGCACTCA +
Preference number: 5 (lower is better)
Translates to: RVDFLWGLSPWFTDG*LVAMPSHGLSSVHS
Trigger: TGAGTGCACAGAGGAAAGACCATGTGACGGCATGGCTACAAGGCAGCCATCTGTAAACCAAGGAGAGAGACCCCAAAGGAAATCAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000524380.5
ENST00000526682.5
ENST00000526728.5
ENST00000527172.5
ENST00000527751.5
ENST00000532578.1
CDS CCA 90 bp AGGCTAGAAGTCCACGATCAAGGTGTCAGCAGGGTTGATTTCCTTTaGGGTCTCTCTCCTTGGTTTACAGATGGCTGCCTTGTAGCCATG +
Preference number: 5 (lower is better)
Translates to: RLEVHDQGVSRVDFL*GLSPWFTDGCLVAM
Trigger: CATGGCTACAAGGCAGCCATCTGTAAACCAAGGAGAGAGACCCCAAAGGAAATCAACCCTGCTGACACCTTGATCGTGGACTTCTAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524380.5
ENST00000526682.5
ENST00000526728.5
ENST00000527172.5
ENST00000527751.5
ENST00000532578.1
CDS-3UTR CAA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGATAGAGCTCGTTGCTTaGCAAGCCACCCCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMIELVA*QATPFE
Trigger: TTCAAAGGGGGTGGCTTGCAAAGCAACGAGCTCTAT...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp GAGGAGGATAGGGATTCAAGGTGGATAAAAGCCCCCAGACCTGGAGGGAGCAGTAAGGCCAACACATCCTaGGTGGTTATATGTGTTGTC +
Preference number: 5 (lower is better)
Translates to: EEDRDSRWIKAPRPGGSSKANTS*VVICVV
Trigger: GACAACACATATAACCACCAAGGATGTGTTGGCCTT...ACTGCTCCCTCCAGGTCTGGGGGCTTTTATCCACCTTGAATCCCTATCCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTGTGAGTTCCTTGAGCTaGAGAGGAAGCCTGAGAGGG +
Preference number: 5 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSVSSLS*RGSLRG
Trigger: CCCTCTCAGGCTTCCTCTCAAGCTCAAGGAACTCAC...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CAAGACCATCTCATTCAGTGGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTTCAAAGAACAGTCCTTTaGCAAGAAGCTGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: QDHLIQWPADCGYRGGIVQRTVL*QEAGSE
Trigger: TTCAGAACCAGCTTCTTGCAAAAGGACTGTTCTTTG...AACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS-3UTR CAA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTTTCAGGACAGTCACCTaGGGCCGGACCCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASFRTVT*GRTLEC
Trigger: GCACTCCAGGGTCCGGCCCAAGGTGACTGTCCTGAA...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTGGCAGGAGCAGGCACTaGTTCTCACTGCTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASGRSRH*FSLLAS
Trigger: GGAGGCCAGCAGTGAGAACAAGTGCCTGCTCCTGCC...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CAAGGCTGGAGTCAGAAAGTGACCATTAGGCAACTGGTCACTACAATTGGTGGCGCATTGGATATGTCATaGGGAGCATCAGGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: QGWSQKVTIRQLVTTIGGALDMS*GASGSP
Trigger: TGGACTGCCTGATGCTCCCAATGACATATCCAATGC...GCCACCAATTGTAGTGACCAGTTGCCTAATGGTCACTTTCTGACTCCAGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGGAAATGCCAGGAGCATaGGATATGTCATTGGGAGCA +
Preference number: 5 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMEMPGA*DMSLGA
Trigger: TGCTCCCAATGACATATCCAATGCTCCTGGCATTTC...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS GCA 90 bp GTCATTTTCAGCCTACGACTATGGCTCCCGCGGACTCAGATAAACTaGACAGTCACACACAACGAGTTGCCACTGACTCATTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: VIFSLRLWLPRTQIN*TVTHNELPLTHFSP
Trigger: AGGAGAAAAATGAGTCAGTGGCAACTCGTTGTGTGTGACTGTGCAGTTTATCTGAGTCCGCGGGAGCCATAGTCGTAGGCTGAAAATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526679.1
CDS CCA 90 bp CTCTCCTTGGTTTACAGATGGCTGCCTTGTAGCCATGCCGTCACATaGTCTTTCCTCTGTGCACTCATGCCCTTGATGTTTCTCTTTATG +
Preference number: 5 (lower is better)
Translates to: LSLVYRWLPCSHAVT*SFLCALMPLMFLFM
Trigger: CATAAAGAGAAACATCAAGGGCATGAGTGCACAGAGGAAAGACCATGTGACGGCATGGCTACAAGGCAGCCATCTGTAAACCAAGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524380.5
ENST00000526682.5
ENST00000526728.5
ENST00000527172.5
ENST00000527751.5
ENST00000532578.1
CDS-3UTR CAA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTATAGAGCTCGTTGCTTaGCAAGCCACCCCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSIELVA*QATPFE
Trigger: TTCAAAGGGGGTGGCTTGCAAAGCAACGAGCTCTAT...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTCACCAGCTCCTCCAGTaGCAAATAACTCTCACTTGG +
Preference number: 5 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSHQLLQ*QITLTW
Trigger: CCAAGTGAGAGTTATTTGCAACTGGAGGAGCTGGTG...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTGGATCTGGATGTAGGTaGAGGATAGATCCTCACCCA +
Preference number: 5 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSGSGCR*RIDPHP
Trigger: TGGGTGAGGATCTATCCTCAACCTACATCCAGATCC...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS CCA 90 bp AACCACTTGCTTCACCAGCTCCTCCAGTTGCAAATAACTCTCACTTaGGCCTGTGGGCTCGTGAACACTCTGAACTGGATAAAATATTGC +
Preference number: 5 (lower is better)
Translates to: NHLLHQLLQLQITLT*ACGLVNTLNWIKYC
Trigger: GCAATATTTTATCCAGTTCAGAGTGTTCACGAGCCCACAGGCCCAAGTGAGAGTTATTTGCAACTGGAGGAGCTGGTGAAGCAAGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389693.3
CDS-3UTR CAA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTGGCAGGAGCAGGCACTaGTTCTCACTGCTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSGRSRH*FSLLAS
Trigger: GGAGGCCAGCAGTGAGAACAAGTGCCTGCTCCTGCC...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGATCAGCAGATCTCTTTaGGACATTTCTCTCCCATCA +
Preference number: 5 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMISRSL*DISLPS
Trigger: TGATGGGAGAGAAATGTCCAAAAGAGATCTGCTGAT...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp AGAAACCATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGGGTTGTCAGTGATGTaGGGCTCACTGGAGCACTGC +
Preference number: 5 (lower is better)
Translates to: RNHEIYEFTQAIVGSSPAGLSVM*GSLEHC
Trigger: GCAGTGCTCCAGTGAGCCCAACATCACTGACAACCC...AGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATGGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CACCATGGATCTCTTTATCCTGAACCACTTCCAGTCTCTTTTCCCAGGAGCTCTCAAAGAACAGTCCTTTaGCAAGAAGCTGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: HHGSLYPEPLPVSFPRSSQRTVL*QEAGSE
Trigger: TTCAGAACCAGCTTCTTGCAAAAGGACTGTTCTTTG...AGAGCTCCTGGGAAAAGAGACTGGAAGTGGTTCAGGATAAAGAGATCCATGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTGCAAATAACTCTCACTaGGGCCTGTGGGCTCGTGAA +
Preference number: 5 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASANNSH*GLWARE
Trigger: TTCACGAGCCCACAGGCCCAAGTGAGAGTTATTTGC...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp TCAGTAATCCACGGAGATGGAGGGGTCCTCATCCTGGTTGCAAAACAGGAGATGAGGTGGCTCATCTCTTaGAGATTTCATAAATACCAA +
Preference number: 5 (lower is better)
Translates to: SVIHGDGGVLILVAKQEMRWLIS*RFHKYQ
Trigger: TTGGTATTTATGAAATCTCAAAGAGATGAGCCACCT...CATCTCCTGTTTTGCAACCAGGATGAGGACCCCTCCATCTCCGTGGATTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTCACCCTCTTGCCATATaGGAAGCCAAGGTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASHPLAI*EAKVAH
Trigger: ATGAGCCACCTTGGCTTCCAATATGGCAAGAGGGTG...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTATAGATACAGGCCAGTaGGTTGGTATCAGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSIDTGQ*VGISWP
Trigger: GGGCCAGCTGATACCAACCAACTGGCCTGTATCTAT...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTGCATTGGATATGTCATaGGGAGCATCAGGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSALDMS*GASGSP
Trigger: TGGACTGCCTGATGCTCCCAATGACATATCCAATGC...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTAAGGCCAACACATCCTaGGTGGTTATATGTGTTGTC +
Preference number: 5 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASKANTS*VVICVV
Trigger: GACAACACATATAACCACCAAGGATGTGTTGGCCTT...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTCAAAGAACAGTCCTTTaGCAAGAAGCTGGTTCTGAA +
Preference number: 5 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASQRTVL*QEAGSE
Trigger: TTCAGAACCAGCTTCTTGCAAAAGGACTGTTCTTTG...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTATCAGCAGATCTCTTTaGGACATTTCTCTCCCATCA +
Preference number: 5 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASISRSL*DISLPS
Trigger: TGATGGGAGAGAAATGTCCAAAAGAGATCTGCTGAT...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTCTACTGATGCTCCATTaGCTAATGCATGTTAGTCAG +
Preference number: 5 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASLLMLH*LMHVSQ
Trigger: CTGACTAACATGCATTAGCAAATGGAGCATCAGTAG...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp CATGAAATTTACGAATTTACACAAGCCATTGTGGGTTCAAGTCCAGCTGCTTCTAGGTGGCTCATCTCTTaGAGATTTCATAAATACCAA +
Preference number: 5 (lower is better)
Translates to: HEIYEFTQAIVGSSPAASRWLIS*RFHKYQ
Trigger: TTGGTATTTATGAAATCTCAAAGAGATGAGCCACCT...AGAAGCAGCTGGACTTGAACCCACAATGGCTTGTGTAAATTCGTAAATTTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS-3UTR CAA 90 bp TGTACATCGATGGTAAAAAGTTGTAAACTGGCTAACAGTCATCAGCACTTAAGTCTACTGATGCTCCATTaGCTAATGCATGTTAGTCAG +
Preference number: 5 (lower is better)
Translates to: CTSMVKSCKLANSHQHLSLLMLH*LMHVSQ
Trigger: CTGACTAACATGCATTAGCAAATGGAGCATCAGTAG...ACTTAAGTGCTGATGACTGTTAGCCAGTTTACAACTTTTTACCATCGATGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS CCA 72 bp CCCTGGAGTGCCGCCTGGCCAGGGGTGAGGCCTGGCTaGCAGGAAGGGACACCTCCGGAGAATCCTCGTGCA +
Preference number: 6 (lower is better)
Translates to: PWSAAWPGVRPG*QEGTPPENPRA
Trigger: TGCACGAGGATTCTCCGGAGGTGTCCCTTCCTGCCAGCCAGGCCTCACCCCTGGCCAGGCGGCACTCCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529020.1
CDS TCA 72 bp CCTGGAGTGCCGCCTGGCCAGCGTGTACGTGGGGCCTaGGAAGCTACGGTCCCCGCTGATGCCGAGGAAAGG +
Preference number: 6 (lower is better)
Translates to: PGVPPGQRVRGA*EATVPADAEER
Trigger: CCTTTCCTCGGCATCAGCGGGGACCGTAGCTTCTCAGGCCCCACGTACACGCTGGCCAGGCGGCACTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000530639.6
CDS TCA 72 bp CCCTGGCCCCCTCCTCCAGTCCGTCAGGGTTGTCAGTaGTGTTGGGCTCACTGGAGCACTGCCGGTGGGGCG +
Preference number: 6 (lower is better)
Translates to: PWPPPPVRQGCQ*CWAHWSTAGGA
Trigger: CGCCCCACCGGCAGTGCTCCAGTGAGCCCAACATCACTGACAACCCTGACGGACTGGAGGAGGGGGCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000530627.1
ENST00000530639.6
CDS GCA 72 bp CCGAGTGGGCATTGGCCACCGTGTGCCGCCGCACGCTaGCACACTTCTCCAGGTAGGCTTCCCCCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: PSGHWPPCAAAR*HTSPGRLPPPA
Trigger: AGCAGGAGGGGGAAGCCTACCTGGAGAAGTGTGGCAGCGTGCGGCGGCACACGGTGGCCAATGCCCACTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 72 bp CACTGCTGGCCTCCTCCCCCAGGCCCGAGTGCATCATaGTGGCCATGGCCAGCAGCTGGATGTCCGAGTGGG +
Preference number: 6 (lower is better)
Translates to: HCWPPPPGPSAS*WPWPAAGCPSG
Trigger: CCCACTCGGACATCCAGCTGCTGGCCATGGCCACCATGATGCACTCGGGCCTGGGGGAGGAGGCCAGCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 72 bp AGGCATAGTTCAGGACAGTCACCTTGGGCCGGACCCTaGAGTGCCGCCTGGCCAGGGGTGAGGCCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: RHSSGQSPWAGP*SAAWPGVRPGW
Trigger: CCAGCCAGGCCTCACCCCTGGCCAGGCGGCACTCCAGGGTCCGGCCCAAGGTGACTGTCCTGAACTATGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529020.1
CDS CAA 72 bp GTGGCCATGGCCAGCAGCTGGATGTCCGAGTGGGCATaGGCCACCGTGTGCCGCCGCACGCTGCCACACTTC +
Preference number: 6 (lower is better)
Translates to: VAMASSWMSEWA*ATVCRRTLPHF
Trigger: GAAGTGTGGCAGCGTGCGGCGGCACACGGTGGCCAATGCCCACTCGGACATCCAGCTGCTGGCCATGGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 72 bp GAGCTGGAGCTCAGCTGCAGAGCCTGCCGAGCTGCTTaGAATCGGGGAAGGTCGCTGAGCACGGGGGAGCTC +
Preference number: 6 (lower is better)
Translates to: ELELSCRACRAA*NRGRSLSTGEL
Trigger: GAGCTCCCCCGTGCTCAGCGACCTTCCCCGATTCCAAGCAGCTCGGCAGGCTCTGCAGCTGAGCTCCAGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000378867.7
ENST00000526679.1
ENST00000526682.5
ENST00000526728.5
ENST00000527487.1
ENST00000529034.5
ENST00000530050.5
ENST00000530639.6
ENST00000532121.5
CDS CCA 72 bp AGGCATAGTTCAGGACAGTCACCTTGGGCCGGACCCTaGAGTGCCGCCTGGCCAGCGTGTACGTGGGGCCTG +
Preference number: 6 (lower is better)
Translates to: RHSSGQSPWAGP*SAAWPACTWGL
Trigger: CAGGCCCCACGTACACGCTGGCCAGGCGGCACTCCAGGGTCCGGCCCAAGGTGACTGTCCTGAACTATGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000530639.6
CDS CCA 72 bp TGGCCATGGCCAGCAGCTGGATGTCCGAGTGGGCATTaGCCACCGTGTGCCGCCGCACGCTGCCACACTTCT +
Preference number: 6 (lower is better)
Translates to: WPWPAAGCPSGH*PPCAAARCHTS
Trigger: AGAAGTGTGGCAGCGTGCGGCGGCACACGGTGGCCAATGCCCACTCGGACATCCAGCTGCTGGCCATGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 72 bp ATCATGGTGGCCATGGCCAGCAGCTGGATGTCCGAGTaGGCATTGGCCACCGTGTGCCGCCGCACGCTGCCA +
Preference number: 6 (lower is better)
Translates to: IMVAMASSWMSE*ALATVCRRTLP
Trigger: TGGCAGCGTGCGGCGGCACACGGTGGCCAATGCCCACTCGGACATCCAGCTGCTGGCCATGGCCACCATGAT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 72 bp AGGCCCGAGTGCATCATGGTGGCCATGGCCAGCAGCTaGATGTCCGAGTGGGCATTGGCCACCGTGTGCCGC +
Preference number: 6 (lower is better)
Translates to: RPECIMVAMASS*MSEWALATVCR
Trigger: GCGGCACACGGTGGCCAATGCCCACTCGGACATCCAGCTGCTGGCCATGGCCACCATGATGCACTCGGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 72 bp CCTCCTCCCCCAGGCCCGAGTGCATCATGGTGGCCATaGCCAGCAGCTGGATGTCCGAGTGGGCATTGGCCA +
Preference number: 6 (lower is better)
Translates to: PPPPGPSASWWP*PAAGCPSGHWP
Trigger: TGGCCAATGCCCACTCGGACATCCAGCTGCTGGCCATGGCCACCATGATGCACTCGGGCCTGGGGGAGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 72 bp CGGTTATCGGGGAGGCATAGTTCAGGACAGTCACCTTaGGCCGGACCCTGGAGTGCCGCCTGGCCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: RLSGRHSSGQSP*AGPWSAAWPGV
Trigger: CACCCCTGGCCAGGCGGCACTCCAGGGTCCGGCCCAAGGTGACTGTCCTGAACTATGCCTCCCCGATAACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529020.1
CDS GCA 72 bp GTGCAGTCAAACACAGGCGCGGGCGCGTGGGTGCAGTaGGGAGCCCCGGGAATAAACCGCTTCTCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: VQSNTGAGAWVQ*GAPGINRFSGS
Trigger: AGAGCCAGAGAAGCGGTTTATTCCCGGGGCTCCGCACTGCACCCACGCGCCCGCGCCTGTGTTTGACTGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529020.1
CDS GCA 72 bp TGGCTGGCAGGAAGGGACACCTCCGGAGAATCCTCGTaGAGTCAAACACAGGCGCGGGCGCGTGGGTGCAGT +
Preference number: 6 (lower is better)
Translates to: WLAGRDTSGESS*SQTQARARGCS
Trigger: ACTGCACCCACGCGCCCGCGCCTGTGTTTGACTGCACGAGGATTCTCCGGAGGTGTCCCTTCCTGCCAGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529020.1
CDS CCA 72 bp AAGCGCGGTCTAGGCCTGCGGAAGGAGCCCATCTTGTaGAACTCGACGGGCAGAATGGGAGCGAAGCCGCGG +
Preference number: 6 (lower is better)
Translates to: KRGLGLRKEPIL*NSTGRMGAKPR
Trigger: CCGCGGCTTCGCTCCCATTCTGCCCGTCGAGTTCCACAAGATGGGCTCCTTCCGCAGGCCTAGACCGCGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000378867.7
ENST00000524380.5
ENST00000526679.1
ENST00000526682.5
ENST00000526728.5
ENST00000527172.5
ENST00000527487.1
ENST00000529034.5
ENST00000530050.5
ENST00000530252.1
ENST00000530639.6
ENST00000532121.5
CDS CCA 72 bp CGGTTATCGGGGAGGCATAGTTCAGGACAGTCACCTTaGGCCGGACCCTGGAGTGCCGCCTGGCCAGCGTGT +
Preference number: 6 (lower is better)
Translates to: RLSGRHSSGQSP*AGPWSAAWPAC
Trigger: ACACGCTGGCCAGGCGGCACTCCAGGGTCCGGCCCAAGGTGACTGTCCTGAACTATGCCTCCCCGATAACCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000530639.6
CDS TCA 72 bp ACAGGAGATGGAAAGGCCCAGGGGTGGCGACTCAGCTaGGGGAAGCACAGTTCAGCTCCGAGCCCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: TGDGKAQGWRLS*GKHSSAPSPPG
Trigger: GCCAGGAGGGCTCGGAGCTGAACTGTGCTTCCCTCAGCTGAGTCGCCACCCCTGGGCCTTTCCATCTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000530627.1
ENST00000530639.6
CDS GCA 72 bp CTGTTCCAGGCTGAGCTGGAGCTCAGCTGCAGAGCCTaGCGAGCTGCTTGGAATCGGGGAAGGTCGCTGAGC +
Preference number: 6 (lower is better)
Translates to: LFQAELELSCRA*RAAWNRGRSLS
Trigger: GCTCAGCGACCTTCCCCGATTCCAAGCAGCTCGGCAGGCTCTGCAGCTGAGCTCCAGCTCAGCCTGGAACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000378867.7
ENST00000526679.1
ENST00000526682.5
ENST00000526728.5
ENST00000527487.1
ENST00000529034.5
ENST00000530050.5
ENST00000530639.6
ENST00000532121.5
CDS CCA 72 bp GTGCGGAGCCCCGGGAATAAACCGCTTCTCTGGCTCTaGTCACCTACCCTGCGGGTGACCTGGAGACCAGGA +
Preference number: 6 (lower is better)
Translates to: VRSPGNKPLLWL*SPTLRVTWRPG
Trigger: TCCTGGTCTCCAGGTCACCCGCAGGGTAGGTGACCAGAGCCAGAGAAGCGGTTTATTCCCGGGGCTCCGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529020.1
CDS CCA 72 bp GGTGCAGTGCGGAGCCCCGGGAATAAACCGCTTCTCTaGCTCTGGTCACCTACCCTGCGGGTGACCTGGAGA +
Preference number: 6 (lower is better)
Translates to: GAVRSPGNKPLL*LWSPTLRVTWR
Trigger: TCTCCAGGTCACCCGCAGGGTAGGTGACCAGAGCCAGAGAAGCGGTTTATTCCCGGGGCTCCGCACTGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529020.1
CDS CCA 72 bp AGAATCCTCGTGCAGTCAAACACAGGCGCGGGCGCGTaGGTGCAGTGCGGAGCCCCGGGAATAAACCGCTTC +
Preference number: 6 (lower is better)
Translates to: RILVQSNTGAGA*VQCGAPGINRF
Trigger: GAAGCGGTTTATTCCCGGGGCTCCGCACTGCACCCACGCGCCCGCGCCTGTGTTTGACTGCACGAGGATTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529020.1
CDS CAA 90 bp GGGGAGCTCATGAAGCGCGGTCTAGGCCTGCGGAAGGAGCCCATCTaGTGGAACTCGACGGGCAGAATGGGAGCGAAGCCGCGGGTCATA +
Preference number: 6 (lower is better)
Translates to: GELMKRGLGLRKEPI*WNSTGRMGAKPRVI
Trigger: TATGACCCGCGGCTTCGCTCCCATTCTGCCCGTCGAGTTCCACAAGATGGGCTCCTTCCGCAGGCCTAGACCGCGCTTCATGAGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000378867.7
ENST00000524380.5
ENST00000526679.1
ENST00000526682.5
ENST00000526728.5
ENST00000527172.5
ENST00000527487.1
ENST00000529034.5
ENST00000530050.5
ENST00000530252.1
ENST00000530639.6
ENST00000532121.5
CDS CAA 72 bp ATGAAGCGCGGTCTAGGCCTGCGGAAGGAGCCCATCTaGTGGAACTCGACGGGCAGAATGGGAGCGAAGCCG +
Preference number: 6 (lower is better)
Translates to: MKRGLGLRKEPI*WNSTGRMGAKP
Trigger: CGGCTTCGCTCCCATTCTGCCCGTCGAGTTCCACAAGATGGGCTCCTTCCGCAGGCCTAGACCGCGCTTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000378867.7
ENST00000524380.5
ENST00000526679.1
ENST00000526682.5
ENST00000526728.5
ENST00000527172.5
ENST00000527487.1
ENST00000529034.5
ENST00000530050.5
ENST00000530252.1
ENST00000530639.6
ENST00000532121.5
CDS CAA 90 bp CCTGGCTGCAGGATGAGCAACATCTGGACAATGGACGAGGGCAGCTaGGACTGGGCCAGCAGCAGCAGGTCACCCAGCTTCACCTTCAGC +
Preference number: 6 (lower is better)
Translates to: PGCRMSNIWTMDEGS*DWASSSRSPSFTFS
Trigger: GCTGAAGGTGAAGCTGGGTGACCTGCTGCTGCTGGCCCAGTCCAAGCTGCCCTCGTCCATTGTCCAGATGTTGCTCATCCTGCAGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527487.1
CDS GCA 72 bp CTGTCCCCGTCCACTTCTCAGTTAGTGTTCCCAGGCTaGCTAGTCCAGCAAAGCGCCTGGGCAGCCACAACC +
Preference number: 6 (lower is better)
Translates to: LSPSTSQLVFPG*LVQQSAWAATT
Trigger: GGTTGTGGCTGCCCAGGCGCTTTGCTGGACTAGGCAGCCTGGGAACACTAACTGAGAAGTGGACGGGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526679.1
CDS TCA 72 bp GCGTGTACGTGGGGCCTGAGAAGCTACGGTCCCCGCTaGTGCCGAGGAAAGGAGAAACCACTTGCTTCACCA +
Preference number: 6 (lower is better)
Translates to: ACTWGLRSYGPR*CRGKEKPLASP
Trigger: TGGTGAAGCAAGTGGTTTCTCCTTTCCTCGGCATCAGCGGGGACCGTAGCTTCTCAGGCCCCACGTACACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000530639.6
CDS TCA 72 bp CGGTCTTCCCGAGGAAGTTTTCTCACCGGAGAGAAATaGGCGACCTGGATGGTTCTCCCCGTCGCGCTCTGC +
Preference number: 6 (lower is better)
Translates to: RSSRGSFLTGEK*ATWMVLPVALC
Trigger: GCAGAGCGCGACGGGGAGAACCATCCAGGTCGCTCATTTCTCTCCGGTGAGAAAACTTCCTCGGGAAGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526682.5
ENST00000527751.5
ENST00000530252.1
ENST00000532843.1
CDS CCA 72 bp CTTCTCCAGGTAGGCTTCCCCCTCCTGCTCTGTCAGTaGGGTCAAGACCATCTCATTCAGTGGCCGGCTGAC +
Preference number: 6 (lower is better)
Translates to: LLQVGFPLLLCQ*GQDHLIQWPAD
Trigger: GTCAGCCGGCCACTGAATGAGATGGTCTTGACCCCACTGACAGAGCAGGAGGGGGAAGCCTACCTGGAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 72 bp GTCTGGTTTCTTCTTCCAGGGCAGGTCCCACCTTGCTaGGGAGAGGTGAATGACCATGGCCTTCCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: VWFLLPGQVPPC*GEVNDHGLPAS
Trigger: GGAGGCTGGAAGGCCATGGTCATTCACCTCTCCCCAGCAAGGTGGGACCTGCCCTGGAAGAAGAAACCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529034.5
ENST00000530639.6
ENST00000531269.5
CDS CCA 72 bp TCCCCTGTAAACCTGGGAACAGCAGTGTCTGCTCCATaGTCCAGCATCCAGCACCCCCAGCACCATACCCAG +
Preference number: 6 (lower is better)
Translates to: SPVNLGTAVSAP*SSIQHPQHHTQ
Trigger: CTGGGTATGGTGCTGGGGGTGCTGGATGCTGGACCATGGAGCAGACACTGCTGTTCCCAGGTTTACAGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525672.1
CDS CCA 72 bp AGGCATAGTTCAGGACAGTCACCTTGGGCCGGACCCTaGAGTGCCGCCTGGCTTAATCCTCACTTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: RHSSGQSPWAGP*SAAWLNPHLLP
Trigger: GGGAAGCAAGTGAGGATTAAGCCAGGCGGCACTCCAGGGTCCGGCCCAAGGTGACTGTCCTGAACTATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525672.1
CDS CCA 72 bp GAAGTTTTCTCACCGGAGAGAAATGAGCGACCTGGATaGTTCTCCCCGTCGCGCTCTGCCCAGCTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: EVFSPERNERPG*FSPSRSAQLSL
Trigger: GAGGGAGAGCTGGGCAGAGCGCGACGGGGAGAACCATCCAGGTCGCTCATTTCTCTCCGGTGAGAAAACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000526682.5
ENST00000527751.5
ENST00000530252.1
ENST00000532843.1
CDS CCA 72 bp CTTCAGCCCCGGCCGGAAGTGTCCCAGACTCACGCCTaGCTCACTGTTGAGCCTGCCAGGAGATTCCTTTTT +
Preference number: 6 (lower is better)
Translates to: LQPRPEVSQTHA*LTVEPARRFLF
Trigger: AAAAAGGAATCTCCTGGCAGGCTCAACAGTGAGCCAGGCGTGAGTCTGGGACACTTCCGGCCGGGGCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527751.5
CDS CAA 90 bp ACACTCTGCAGGATGAGCAACATCTGGACAATGGACGAGGGCAGCTaGGACTGGGCCAGCAGCAGCAGGTCACCCAGCTTCACCTTCAGC +
Preference number: 6 (lower is better)
Translates to: TLCRMSNIWTMDEGS*DWASSSRSPSFTFS
Trigger: GCTGAAGGTGAAGCTGGGTGACCTGCTGCTGCTGGCCCAGTCCAAGCTGCCCTCGTCCATTGTCCAGATGTTGCTCATCCTGCAGAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378867.7
ENST00000530639.6
CDS TCA 72 bp CACTCGGAGCAAGTTCTGTTTTCAGGACGGAGCCGGTaGCCGGTTCGCCAATGGAAGGCAGGAGTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: HSEQVLFSGRSR*PVRQWKAGVSG
Trigger: ACCAGAGACTCCTGCCTTCCATTGGCGAACCGGTCACCGGCTCCGTCCTGAAAACAGAACTTGCTCCGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526728.5
CDS GCA 72 bp ACTTGCTTCCCCTGTAAACCTGGGAACAGCAGTGTCTaGTCCATGGTCCAGCATCCAGCACCCCCAGCACCA +
Preference number: 6 (lower is better)
Translates to: TCFPCKPGNSSV*SMVQHPAPPAP
Trigger: TGGTGCTGGGGGTGCTGGATGCTGGACCATGGAGCAGACACTGCTGTTCCCAGGTTTACAGGGGAAGCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525672.1
CDS TCA 72 bp TCAGTGGGGTCAAGACCATCTCATTCAGTGGCCGGCTaGCTGCGGTTATCGGGGAGGCATAGTTCAGGACAG +
Preference number: 6 (lower is better)
Translates to: SVGSRPSHSVAG*LRLSGRHSSGQ
Trigger: CTGTCCTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTGACCCCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS GCA 72 bp AGTTCAGCTTCACCTCTAGGACCAGAAGGTTCCGAATaGCCTCGGAAAGGGCTTCTCCAGGGGCTGCCTTCA +
Preference number: 6 (lower is better)
Translates to: SSASPLGPEGSE*PRKGLLQGLPS
Trigger: TGAAGGCAGCCCCTGGAGAAGCCCTTTCCGAGGGCATTCGGAACCTTCTGGTCCTAGAGGTGAAGCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000378867.7
ENST00000524380.5
ENST00000526679.1
ENST00000526682.5
ENST00000526728.5
ENST00000527172.5
ENST00000529034.5
ENST00000530050.5
ENST00000530252.1
ENST00000530639.6
ENST00000532121.5
CDS GCA 72 bp TGGGGTCAAGACCATCTCATTCAGTGGCCGGCTGACTaGGGTTATCGGGGAGGCATAGTTCAGGACAGTCAC +
Preference number: 6 (lower is better)
Translates to: WGQDHLIQWPAD*GYRGGIVQDSH
Trigger: GTGACTGTCCTGAACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS GCA 72 bp CCTGCTGAACACTGGCATTCACTGGCATTCATCCCCTaGACCGGAGCCAGCAAGAGCAGCTCCTTTCAAACC +
Preference number: 6 (lower is better)
Translates to: PAEHWHSLAFIP*TGASKSSSFQT
Trigger: GGTTTGAAAGGAGCTGCTCTTGCTGGCTCCGGTGCAGGGGATGAATGCCAGTGAATGCCAGTGTTCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530627.1
CDS CCA 72 bp CTGCTCTGTCAGTGGGGTCAAGACCATCTCATTCAGTaGCCGGCTGACTGCGGTTATCGGGGAGGCATAGTT +
Preference number: 6 (lower is better)
Translates to: LLCQWGQDHLIQ*PADCGYRGGIV
Trigger: AACTATGCCTCCCCGATAACCGCAGTCAGCCGGCCACTGAATGAGATGGTCTTGACCCCACTGACAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000525672.1
ENST00000529020.1
ENST00000530627.1
ENST00000530639.6
CDS CCA 72 bp GATGTTTCTCTTTATGTCCGAATTGCCTCTTCTCCTTaGGGTCCCCGGCGTGAATCACCCCGAGTCGCGCAC +
Preference number: 6 (lower is better)
Translates to: DVSLYVRIASSP*GPRRESPRVAH
Trigger: GTGCGCGACTCGGGGTGATTCACGCCGGGGACCCCAAGGAGAAGAGGCAATTCGGACATAAAGAGAAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000524380.5
ENST00000526682.5
ENST00000527751.5
ENST00000532578.1
CDS CCA 72 bp GCAGCTCCTTTCAAACCCCCAGAGAGATGCAAAGCCTaGATAAGGCCGTCCTCGGGTCCTTTGTTGGGGACT +
Preference number: 6 (lower is better)
Translates to: AAPFKPPERCKA*IRPSSGPLLGT
Trigger: AGTCCCCAACAAAGGACCCGAGGACGGCCTTATCCAGGCTTTGCATCTCTCTGGGGGTTTGAAAGGAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530627.1
CDS CAA 90 bp CCGCCACTCTCAATCCTGACAGCTGAAGAGAATGTGAAGCTGTCTTaGTCTCCACTGTTCCTACTGCCGGGCAGAGCCAAGAGACCTCCC +
Preference number: 6 (lower is better)
Translates to: PPLSILTAEENVKLS*SPLFLLPGRAKRPP
Trigger: GGGAGGTCTCTTGGCTCTGCCCGGCAGTAGGAACAGTGGAGACAAAGACAGCTTCACATTCTCTTCAGCTGTCAGGATTGAGAGTGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526679.1
CDS TCA 72 bp CAGAATGGGAGCGAAGCCGCGGGTCATAAGTCCTGGTaGCAGTTCAGCTTCACCTCTAGGACCAGAAGGTTC +
Preference number: 6 (lower is better)
Translates to: QNGSEAAGHKSW*QFSFTSRTRRF
Trigger: GAACCTTCTGGTCCTAGAGGTGAAGCTGAACTGTCACCAGGACTTATGACCCGCGGCTTCGCTCCCATTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000378867.7
ENST00000524380.5
ENST00000526679.1
ENST00000526682.5
ENST00000526728.5
ENST00000527172.5
ENST00000527487.1
ENST00000529034.5
ENST00000530050.5
ENST00000530252.1
ENST00000530639.6
ENST00000532121.5
CDS TCA 72 bp TTTTGCCAGACAGGAAGGCATCCCAGAGCGGATTCCTaGAGCACAGTTAGCAAGCACACAGCCTGGTCCCAC +
Preference number: 6 (lower is better)
Translates to: FCQTGRHPRADS*STVSKHTAWSH
Trigger: GTGGGACCAGGCTGTGTGCTTGCTAACTGTGCTTCAGGAATCCGCTCTGGGATGCCTTCCTGTCTGGCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530050.5
CDS CCA 72 bp TCTCCAGGAAACTGTAAGACACTGAGGACCGCAGGCTaGCTCCTGTCCCCGTCCACTTCTCAGTTAGTGTTC +
Preference number: 6 (lower is better)
Translates to: SPGNCKTLRTAG*LLSPSTSQLVF
Trigger: GAACACTAACTGAGAAGTGGACGGGGACAGGAGCCAGCCTGCGGTCCTCAGTGTCTTACAGTTTCCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526679.1
CDS CAA 72 bp ACGGTCCCCGCTGATGCCGAGGAAAGGAGAAACCACTaGCTTCACCAGCTCCTCCAGTTGCAAATAACTCTC +
Preference number: 6 (lower is better)
Translates to: TVPADAEERRNH*LHQLLQLQITL
Trigger: GAGAGTTATTTGCAACTGGAGGAGCTGGTGAAGCAAGTGGTTTCTCCTTTCCTCGGCATCAGCGGGGACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000530639.6
CDS CAA 90 bp GATGCCGAGGAAAGGAGAAACCACTTGCTTCACCAGCTCCTCCAGTaGCAAATAACTCTCACTTGGGCCTGTGGGCTCGTGAACACTCTG +
Preference number: 6 (lower is better)
Translates to: DAEERRNHLLHQLLQ*QITLTWACGLVNTL
Trigger: CAGAGTGTTCACGAGCCCACAGGCCCAAGTGAGAGTTATTTGCAACTGGAGGAGCTGGTGAAGCAAGTGGTTTCTCCTTTCCTCGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000530639.6
CDS GCA 72 bp AGCCTACGACTATGGCTCCCGCGGACTCAGATAAACTaGACAGTCACACACAACGAGTTGCCACTGACTCAT +
Preference number: 6 (lower is better)
Translates to: SLRLWLPRTQIN*TVTHNELPLTH
Trigger: ATGAGTCAGTGGCAACTCGTTGTGTGTGACTGTGCAGTTTATCTGAGTCCGCGGGAGCCATAGTCGTAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526679.1
CDS CAA 72 bp GAAAGGAGAAACCACTTGCTTCACCAGCTCCTCCAGTaGCAAATAACTCTCACTTGGGCCTGTGGGCTCGTG +
Preference number: 6 (lower is better)
Translates to: ERRNHLLHQLLQ*QITLTWACGLV
Trigger: CACGAGCCCACAGGCCCAAGTGAGAGTTATTTGCAACTGGAGGAGCTGGTGAAGCAAGTGGTTTCTCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000530639.6
CDS CAA 72 bp GCACTCATGCCCTTGATGTTTCTCTTTATGTCCGAATaGCCTCTTCTCCTTGGGGTCCCCGGCGTGAATCAC +
Preference number: 6 (lower is better)
Translates to: ALMPLMFLFMSE*PLLLGVPGVNH
Trigger: GTGATTCACGCCGGGGACCCCAAGGAGAAGAGGCAATTCGGACATAAAGAGAAACATCAAGGGCATGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000524380.5
ENST00000526682.5
ENST00000527751.5
ENST00000532578.1
CDS CAA 90 bp TGGCTCCCGCGGACTCAGATAAACTGCACAGTCACACACAACGAGTaGCCACTGACTCATTTTTCTCCTCCCGAATCCGCCACTCTCAAT +
Preference number: 6 (lower is better)
Translates to: WLPRTQINCTVTHNE*PLTHFSPPESATLN
Trigger: ATTGAGAGTGGCGGATTCGGGAGGAGAAAAATGAGTCAGTGGCAACTCGTTGTGTGTGACTGTGCAGTTTATCTGAGTCCGCGGGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526679.1
CDS GCA 72 bp TCAGACATCATTTTTCCCAGGGCCCATTCAATGACCTaGCCTTTCCTGGCAGAGAGCCCACAAAAGTCTTGG +
Preference number: 6 (lower is better)
Translates to: SDIIFPRAHSMT*PFLAESPQKSW
Trigger: CCAAGACTTTTGTGGGCTCTCTGCCAGGAAAGGGCAGGTCATTGAATGGGCCCTGGGAAAAATGATGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527172.5
CDS GCA 72 bp TTCCTTTGGGGTCTCTCTCCTTGGTTTACAGATGGCTaGCTTGTAGCCATGCCGTCACATGGTCTTTCCTCT +
Preference number: 6 (lower is better)
Translates to: FLWGLSPWFTDG*LVAMPSHGLSS
Trigger: AGAGGAAAGACCATGTGACGGCATGGCTACAAGGCAGCCATCTGTAAACCAAGGAGAGAGACCCCAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000524380.5
ENST00000526682.5
ENST00000526728.5
ENST00000527172.5
ENST00000527751.5
ENST00000532578.1
CDS CCA 72 bp ATTGCCTGCAGGGTAGGGAGAGTCTCAGTGAAGAAGTaGTCCCAGACTTCAGCCAGAACCTCAATGCGATTT +
Preference number: 6 (lower is better)
Translates to: IACRVGRVSVKK*SQTSARTSMRF
Trigger: AAATCGCATTGAGGTTCTGGCTGAAGTCTGGGACCACTTCTTCACTGAGACTCTCCCTACCCTGCAGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378867.7
ENST00000389693.3
ENST00000527487.1
ENST00000530639.6
CDS CCA 72 bp GTCCACGATCAAGGTGTCAGCAGGGTTGATTTCCTTTaGGGTCTCTCTCCTTGGTTTACAGATGGCTGCCTT +
Preference number: 6 (lower is better)
Translates to: VHDQGVSRVDFL*GLSPWFTDGCL
Trigger: AAGGCAGCCATCTGTAAACCAAGGAGAGAGACCCCAAAGGAAATCAACCCTGCTGACACCTTGATCGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524380.5
ENST00000526682.5
ENST00000526728.5
ENST00000527172.5
ENST00000527751.5
ENST00000532578.1
CDS CAA 72 bp TCAATCCTGACAGCTGAAGAGAATGTGAAGCTGTCTTaGTCTCCACTGTTCCTACTGCCGGGCAGAGCCAAG +
Preference number: 6 (lower is better)
Translates to: SILTAEENVKLS*SPLFLLPGRAK
Trigger: CTTGGCTCTGCCCGGCAGTAGGAACAGTGGAGACAAAGACAGCTTCACATTCTCTTCAGCTGTCAGGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526679.1
CDS CAA 90 bp TGTAGCCATGCCGTCACATGGTCTTTCCTCTGTGCACTCATGCCCTaGATGTTTCTCTTTATGTCCGAATTGCCTCTTCTCCTTGGGGTC +
Preference number: 6 (lower is better)
Translates to: CSHAVTWSFLCALMP*MFLFMSELPLLLGV
Trigger: GACCCCAAGGAGAAGAGGCAATTCGGACATAAAGAGAAACATCAAGGGCATGAGTGCACAGAGGAAAGACCATGTGACGGCATGGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000524380.5
ENST00000526682.5
ENST00000527751.5
ENST00000532578.1
CDS GCA 72 bp GATAGTCAGCTCCTGGCCCTGAACTGGATAAAATATTaGCTGCAGGGTAGGGAGAGTCTCAGTGAAGAAGTG +
Preference number: 6 (lower is better)
Translates to: DSQLLALNWIKY*LQGRESLSEEV
Trigger: CACTTCTTCACTGAGACTCTCCCTACCCTGCAGGCAATATTTTATCCAGTTCAGGGCCAGGAGCTGACTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378867.7
ENST00000527487.1
ENST00000530639.6
CDS CCA 72 bp GTTTACAGATGGCTGCCTTGTAGCCATGCCGTCACATaGTCTTTCCTCTGTGCACTCATGCCCTTGATGTTT +
Preference number: 6 (lower is better)
Translates to: VYRWLPCSHAVT*SFLCALMPLMF
Trigger: AAACATCAAGGGCATGAGTGCACAGAGGAAAGACCATGTGACGGCATGGCTACAAGGCAGCCATCTGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000524380.5
ENST00000526682.5
ENST00000526728.5
ENST00000527172.5
ENST00000527751.5
ENST00000532578.1
CDS TCA 72 bp CCGTCACATGGTCTTTCCTCTGTGCACTCATGCCCTTaGTGTTTCTCTTTATGTCCGAATTGCCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: PSHGLSSVHSCP*CFSLCPNCLFS
Trigger: GGAGAAGAGGCAATTCGGACATAAAGAGAAACATCAAGGGCATGAGTGCACAGAGGAAAGACCATGTGACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000524380.5
ENST00000526682.5
ENST00000527751.5
ENST00000532578.1
CDS GCA 72 bp TGTGGGCTCGTGAACACTCTGAACTGGATAAAATATTaGCTGCAGGGTAGGGAGAGTCTCAGTGAAGAAGTG +
Preference number: 6 (lower is better)
Translates to: CGLVNTLNWIKY*LQGRESLSEEV
Trigger: CACTTCTTCACTGAGACTCTCCCTACCCTGCAGGCAATATTTTATCCAGTTCAGAGTGTTCACGAGCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389693.3
CDS CAA 90 bp AAACCACTTGCTTCACCAGCTCCTCCAGTTGCAAATAACTCTCACTaGGGCCTGTGGGCTCGTGAACACTCTGAACTGGATAAAATATTG +
Preference number: 6 (lower is better)
Translates to: KPLASPAPPVANNSH*GLWAREHSELDKIL
Trigger: CAATATTTTATCCAGTTCAGAGTGTTCACGAGCCCACAGGCCCAAGTGAGAGTTATTTGCAACTGGAGGAGCTGGTGAAGCAAGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389693.3
CDS CCA 72 bp GCTCCTCCAGTTGCAAATAACTCTCACTTGGGCCTGTaGGCTCGTGAACACTCTGAACTGGATAAAATATTG +
Preference number: 6 (lower is better)
Translates to: APPVANNSHLGL*AREHSELDKIL
Trigger: CAATATTTTATCCAGTTCAGAGTGTTCACGAGCCCACAGGCCCAAGTGAGAGTTATTTGCAACTGGAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389693.3
CDS TCA 72 bp CCGTCACATGGTCTTTCCTCTGTGCACTCATGCCCTTaGTGTTTCTCTTTATGTCCGAATTGCCTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: PSHGLSSVHSCP*CFSLCPNCLFF
Trigger: AAAGAAGAGGCAATTCGGACATAAAGAGAAACATCAAGGGCATGAGTGCACAGAGGAAAGACCATGTGACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527172.5
CDS CAA 72 bp CCAAAGACACTTTGGGCCCAATTTCTAGAAATCTTCTaGACTGGCTGCACTCTAGACCTTTCAAATTCCTTC +
Preference number: 6 (lower is better)
Translates to: PKTLWAQFLEIF*TGCTLDLSNSF
Trigger: GAAGGAATTTGAAAGGTCTAGAGTGCAGCCAGTCAAGAAGATTTCTAGAAATTGGGCCCAAAGTGTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531269.5
CDS CAA 72 bp CATGCCATGCTCAAGGAAATAACCATGACGATAACATaGCCACTGTCATCCTCATTTCATCATCCAAAGACA +
Preference number: 6 (lower is better)
Translates to: HAMLKEITMTIT*PLSSSFHHPKT
Trigger: TGTCTTTGGATGATGAAATGAGGATGACAGTGGCAATGTTATCGTCATGGTTATTTCCTTGAGCATGGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531269.5