RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRR5 (Homo sapiens)

Ensembl gene IDs: ENSG00000186654

Ensembl transcript IDs: ENST00000006251.11, ENST00000336985.11, ENST00000403581.5, ENST00000403696.5, ENST00000431834.5, ENST00000432186.5, ENST00000432916.5, ENST00000455389.3, ENST00000457960.5, ENST00000459857.5, ENST00000475850.1, ENST00000477331.5, ENST00000492289.5, ENST00000492475.5, ENST00000495017.5, ENST00000611394.4, ENST00000617066.4, ENST00000624862.3

Found 645 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCTCCGGGCTaGAGCGGGGCAGGGAGCTGCGGGTGGGATCCAAGCCCTGCTCAG +
Preference number: 1 (lower is better)
Translates to: PSPRTPGSGPPGSPG*SGAGSCGWDPSPAQ
Trigger: CTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGCCCCGCTCCAGCCCGGAGAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR CCA 90 bp GGTGAAGGGCCCCTCGCTGGAGTGGAGGCCGTAGGTGCCCAGGTATaGCGACACCACCTTCTGGACCAGCGTCTCCAGGCGCAGGTAGTC +
Preference number: 1 (lower is better)
Translates to: GEGPLAGVEAVGAQV*RHHLLDQRLQAQVV
Trigger: GACTACCTGCGCCTGGAGACGCTGGTCCAGAAGGTGGTGTCGCCATACCTGGGCACCTACGGCCTCCACTCCAGCGAGGGGCCCTTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431834.5
3UTR CCA 90 bp CCTCGTGCTCCTGCACGGGGTTCAGCAGAGGCGTGTTGTAGCTCTTaGAGCGCACCACAGGGTTCTTGGCCAGCACGTCCCCCGAGCGGG +
Preference number: 1 (lower is better)
Translates to: PRAPARGSAEACCSS*SAPQGSWPARPPSG
Trigger: CCCGCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCGCTCCAAGAGCTACAACACGCCTCTGCTGAACCCCGTGCAGGAGCACGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR CCA 90 bp TCAGCAGAGGCGTGTTGTAGCTCTTGGAGCGCACCACAGGGTTCTTaGCCAGCACGTCCCCCGAGCGGGAGCGGCGGAGGAGGCGCTTTT +
Preference number: 1 (lower is better)
Translates to: SAEACCSSWSAPQGS*PARPPSGSGGGGAF
Trigger: AAAAGCGCCTCCTCCGCCGCTCCCGCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCGCTCCAAGAGCTACAACACGCCTCTGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR GCA 90 bp AGCGCATCCTCTAGCTTCACACTGAGGGTGATGGCATTCCGGAAGTaGAGCAGGGCCAGCTGGCGCACCGATGGCTCCTTGCCCTGCACC +
Preference number: 1 (lower is better)
Translates to: SASSSFTLRVMAFRK*SRASWRTDGSLPCT
Trigger: GGTGCAGGGCAAGGAGCCATCGGTGCGCCAGCTGGCCCTGCTGCACTTCCGGAATGCCATCACCCTCAGTGTGAAGCTAGAGGATGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR CCA 90 bp CCACCCCAGGCAGGAGGAGACAGGTGTGCTGGAGTCTGGTCACTTTaGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTCTCTGTG +
Preference number: 1 (lower is better)
Translates to: PPQAGGDRCAGVWSL*GPAWAEPTGFTFSV
Trigger: CACAGAGAATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGTCTCCTCCTGCCTGGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR CCA 90 bp GGAGGAGACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTaGGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGA +
Preference number: 1 (lower is better)
Translates to: GGDRCAGVWSLWGPA*AEPTGFTFSVGRCG
Trigger: TCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGTCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR TCA 90 bp CCTCCAAGTCGGACATGCCAGAGCCCCGGCCCCGGCCAAAGTCAATaGAAATCCCTTCAGAATCCGAGTCCACGGACTCCAGGATCTGGT +
Preference number: 1 (lower is better)
Translates to: PPSRTCQSPGPGQSQ*KSLQNPSPRTPGSG
Trigger: ACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAGGGATTTTCATTGACTTTGGCCGGGGCCGGGGCTCTGGCATGTCCGACTTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR CCA 90 bp GCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTaGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAA +
Preference number: 1 (lower is better)
Translates to: ARPLGKRRLRCLKQT*AEQGRLMVFPTKTE
Trigger: TTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR TCA 90 bp GCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAAAGTaGCCAAGGCCAGTGACGAGGCCGATAGGGCTGGCGGGACGGGAC +
Preference number: 1 (lower is better)
Translates to: ARKADGISNQDRNTK*PRPVTRPIGLAGRD
Trigger: GTCCCGTCCCGCCAGCCCTATCGGCCTCGTCACTGGCCTTGGTCACTTTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR GCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGCGCCCTCCGCCTCGTaGTCCTGCACGGGGTTCAGC +
Preference number: 2 (lower is better)
Translates to: AGGAWERAADPRLWPGPWAPSAS*SCTGFS
Trigger: GCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432916.5
3UTR-3UTR CCA 90 bp AGGTCCCGGTGGGGCCCTGGCCGGGCGGGTCGGAGAAGCCCTGAGGCTCGGGGCGCCGACCCCCGTCTCTaGCCCGGCCCCTGGGTAAAC +
Preference number: 2 (lower is better)
Translates to: RSRWGPGRAGRRSPEARGADPRL*PGPWVN
Trigger: GTTTACCCAGGGGCCGGGCCAGAGACGGGGGTCGGC...GCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAGGGCCCCACCGGGACCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000432916.5
3UTR-3UTR CCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGCTTTGGGGCCCGGCGTaGGCAGAGCCCACTGGGTTT +
Preference number: 2 (lower is better)
Translates to: AGGAWERAADPRLWPGPWLWGPA*AEPTGF
Trigger: AAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAG...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGGAGTCTGGTCACTTTaGGGCCCGGCGTGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: AGGAWERAADPRLWPGPWGVWSL*GPAWAE
Trigger: CTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR TCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGCCGACTCAGATGCCTaGAACAGACCTGGGCCGAGC +
Preference number: 2 (lower is better)
Translates to: AGGAWERAADPRLWPGPWADSDA*NRPGPS
Trigger: GCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp GGTGGGGCCCTGGCCGGGCGGGTCGGAGAAGCCCTGAGGCTCGGGGCAGGACGTTGCAGCAGGGCCAGCTaGCGCACCGATGGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: GGALAGRVGEALRLGAGRCSRAS*RTDGSL
Trigger: CAAGGAGCCATCGGTGCGCCAGCTGGCCCTGCTGCA...ACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAGGGCCCCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR-3UTR CCA 90 bp CGCCGGGGAGGACCTGAAGGTCCCGGTGGGGCCCTGGCCGGGCGGGTCGGAGAAGCAGCATCTGCACGATaGCAGGGGGCACACGGGCAT +
Preference number: 2 (lower is better)
Translates to: RRGGPEGPGGALAGRVGEAASAR*QGAHGH
Trigger: ATGCCCGTGTGCCCCCTGCCATCGTGCAGATGCTGC...TTCTCCGACCCGCCCGGCCAGGGCCCCACCGGGACCTTCAGGTCCTCCCCGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR-3UTR GCA 90 bp CGCCGGGGAGGACCTGAAGGTCCCGGTGGGGCCCTGGCCGGGCGGGTCGGAGAAAGCACCAGCAGCATCTaGACGATGGCAGGGGGCACA +
Preference number: 2 (lower is better)
Translates to: RRGGPEGPGGALAGRVGESTSSI*TMAGGT
Trigger: TGTGCCCCCTGCCATCGTGCAGATGCTGCTGGTGCT...TTCTCCGACCCGCCCGGCCAGGGCCCCACCGGGACCTTCAGGTCCTCCCCGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR-3UTR GCA 90 bp GGTGGGGCCCTGGCCGGGCGGGTCGGAGAAGCCCTGAGGCTCGGGGCAGGACGTAGTGGAGGCCGTAGGTaGCCAGGTATGGCGACACCA +
Preference number: 2 (lower is better)
Translates to: GGALAGRVGEALRLGAGRSGGRR*PGMATP
Trigger: TGGTGTCGCCATACCTGGGCACCTACGGCCTCCACT...ACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAGGGCCCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431834.5
3UTR-3UTR CCA 90 bp GGGCAGGGAGCTGCGGGTGGGATCCAAGCCCTGCTCAGGGGGCTGGGTCGTGGGGGAGTCTGGTCACTTTaGGGCCCGGCGTGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: GQGAAGGIQALLRGLGRGGVWSL*GPAWAE
Trigger: CTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCC...CCCACGACCCAGCCCCCTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432916.5
3UTR-3UTR CCA 90 bp GGCCCTGGCCGGGCGGGTCGGAGAAGCCCTGAGGCTCGGGGCAGGACGTCATCTTGCAGCAGGGCCAGCTaGCGCACCGATGGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: GPGRAGRRSPEARGRTSSCSRAS*RTDGSL
Trigger: CAAGGAGCCATCGGTGCGCCAGCTGGCCCTGCTGCA...AGATGACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR-3UTR GCA 90 bp TGGAGCGGGGCAGGGAGCTGCGGGTGGGATCCAAGCCCTGCTCAGGGGGCTGGGAGCACCAGCAGCATCTaGACGATGGCAGGGGGCACA +
Preference number: 2 (lower is better)
Translates to: WSGAGSCGWDPSPAQGAGSTSSI*TMAGGT
Trigger: TGTGCCCCCTGCCATCGTGCAGATGCTGCTGGTGCT...CCCAGCCCCCTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGCCCCGCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR-3UTR GCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGCCTCACACGACACTCTaGCGGCCCCCAGAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWPHTTL*RPPEPS
Trigger: GGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGG...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432916.5
3UTR-3UTR CCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGCCGACCCCCGTCTCTaGCCCGGCCCCTGGGTAAAC +
Preference number: 2 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAADPRL*PGPWVN
Trigger: GTTTACCCAGGGGCCGGGCCAGAGACGGGGGTCGGC...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp GACGTCATCTCCGACACAGAGTGCCTGCGGATGCTGGTACCGCCGGCCGCCGCGGGCGACACCACCTTCTaGACCAGCGTCTCCAGGCGC +
Preference number: 2 (lower is better)
Translates to: DVISDTECLRMLVPPAAAGDTTF*TSVSRR
Trigger: GCGCCTGGAGACGCTGGTCCAGAAGGTGGTGTCGCC...CGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGGAGATGACGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431834.5
3UTR-3UTR TCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGACAGAAATACAAAGTaGCCAAGGCCAGTGACGAGG +
Preference number: 2 (lower is better)
Translates to: AGGAWERAADPRLWPGPWDRNTK*PRPVTR
Trigger: CCTCGTCACTGGCCTTGGTCACTTTGTATTTCTGTC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR TCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGCCGAGCAAGGAAGGCTaGTGGTATTTCCAACCAAGA +
Preference number: 2 (lower is better)
Translates to: AGGAWERAADPRLWPGPWPSKEG*WYFQPR
Trigger: TCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGG...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGGAGTCTGGTCACTTTaGGGCCCGGCGTGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWGVWSL*GPAWAE
Trigger: CTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp GTTCTTGGCCAGCACGTCCCCCGAGCGGGAGCGGCGGAGGAGGCGCTTTTCCAGGCAGCATCTGCACGATaGCAGGGGGCACACGGGCAT +
Preference number: 2 (lower is better)
Translates to: VLGQHVPRAGAAEEALFQAASAR*QGAHGH
Trigger: ATGCCCGTGTGCCCCCTGCCATCGTGCAGATGCTGC...CTGGAAAAGCGCCTCCTCCGCCGCTCCCGCTCGGGGGACGTGCTGGCCAAGAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000431834.5
3UTR-3UTR CCA 90 bp CGCGCCCTCCGCCTCGTGCTCCTGCACGGGGTTCAGCAGAGGCGTGTTGTAGCTGCACCACAGGGTTCTTaGCCAGCACGTCCCCCGAGC +
Preference number: 2 (lower is better)
Translates to: RALRLVLLHGVQQRRVVAAPQGS*PARPPS
Trigger: GCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGC...AGCTACAACACGCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR-3UTR TCA 90 bp GGTGGGGCCCTGGCCGGGCGGGTCGGAGAAGCCCTGAGGCTCGGGGCAGGACGTGACAGAAATACAAAGTaGCCAAGGCCAGTGACGAGG +
Preference number: 2 (lower is better)
Translates to: GGALAGRVGEALRLGAGRDRNTK*PRPVTR
Trigger: CCTCGTCACTGGCCTTGGTCACTTTGTATTTCTGTC...ACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAGGGCCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR-3UTR GCA 90 bp GTGAGGCCTCACACGACACTCTGCCGGCCCCCAGAGCCCTCCAAGTCGGACATGCCGACACAGAGTGCCTaGGGATGCTGGTACCGCCGG +
Preference number: 2 (lower is better)
Translates to: VRPHTTLCRPPEPSKSDMPTQSA*GCWYRR
Trigger: CCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGG...CATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGCCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR-3UTR CCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGCTCTGGCCCGGCCCCTaGGTAAACGCCGACTCAGAT +
Preference number: 2 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWLWPGP*VNADSD
Trigger: ATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAG...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCGCCGACCCCCGTCTCTaGCCCGGCCCCTGGGTAAAC +
Preference number: 2 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGADPRL*PGPWVN
Trigger: GTTTACCCAGGGGCCGGGCCAGAGACGGGGGTCGGC...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCTGGACACCAGAGGGCTaGGGCAGGAGGAGCGTGGGA +
Preference number: 2 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAWTPEG*GRRSVG
Trigger: TCCCACGCTCCTCCTGCCCCAGCCCTCTGGTGTCCA...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCCAGCTGGCGCACCGATaGCTCCTTGCCCTGCACCGG +
Preference number: 2 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTQLAHR*LLALHR
Trigger: CCGGTGCAGGGCAAGGAGCCATCGGTGCGCCAGCTG...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432916.5
3UTR-3UTR GCA 90 bp TGTGAGGCCTCACACGACACTCTGCCGGCCCCCAGAGCCCTCCAAGTCGGACATTCCGCCTCGTGCTCCTaGACGGGGTTCAGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: CEASHDTLPAPRALQVGHSASCS*TGFSRG
Trigger: GCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGGA...ATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGCCTCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR-3UTR CCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTGCCGACCCCCGTCTCTaGCCCGGCCCCTGGGTAAAC +
Preference number: 2 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIADPRL*PGPWVN
Trigger: GTTTACCCAGGGGCCGGGCCAGAGACGGGGGTCGGC...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGCCGACCCCCGTCTCTaGCCCGGCCCCTGGGTAAAC +
Preference number: 2 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAADPRL*PGPWVN
Trigger: GTTTACCCAGGGGCCGGGCCAGAGACGGGGGTCGGC...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTATGGACACCAGAGGGCTaGGGCAGGAGGAGCGTGGGA +
Preference number: 2 (lower is better)
Translates to: VLESGHFGARRGQSPLGLWTPEG*GRRSVG
Trigger: TCCCACGCTCCTCCTGCCCCAGCCCTCTGGTGTCCA...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp CACGACACTCTGCCGGCCCCCAGAGCCCTCCAAGTCGGACATGCCAGAGCCCCGGTGGGCAGAGCCCACTaGGTTTACATTCTCTGTGGG +
Preference number: 2 (lower is better)
Translates to: HDTLPAPRALQVGHARAPVGRAH*VYILCG
Trigger: CCCACAGAGAATGTAAACCCAGTGGGCTCTGCCCAC...CGGGGCTCTGGCATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432916.5
3UTR-3UTR CCA 90 bp CACGACACTCTGCCGGCCCCCAGAGCCCTCCAAGTCGGACATGCCAGAGCCCCGGCGTGTTGTAGCTCTTaGAGCGCACCACAGGGTTCT +
Preference number: 2 (lower is better)
Translates to: HDTLPAPRALQVGHARAPACCSS*SAPQGS
Trigger: AGAACCCTGTGGTGCGCTCCAAGAGCTACAACACGC...CGGGGCTCTGGCATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR CAA 90 bp GCCACCCCAGGCAGGAGGAGACAGGTGTGCTGGAGTCTGGTCACTTaGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTCTCTGT +
Preference number: 2 (lower is better)
Translates to: ATPGRRRQVCWSLVT*GPGVGRAHWVYILC
Trigger: ACAGAGAATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGTCTCCTCCTGCCTGGGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR TCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCGCCGACTCAGATGCCTaGAACAGACCTGGGCCGAGC +
Preference number: 2 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGADSDA*NRPGPS
Trigger: GCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGC...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR GCA 90 bp GTGAGGCCTCACACGACACTCTGCCGGCCCCCAGAGCCCTCCAAGTCGGACATGGACTCATGTACCCCCTaGAGCACCAGCAGCATCTGC +
Preference number: 2 (lower is better)
Translates to: VRPHTTLCRPPEPSKSDMDSCTP*STSSIC
Trigger: GCAGATGCTGCTGGTGCTGCAGGGGGTACATGAGTC...CATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGCCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000431834.5
3UTR-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCATGGACACCAGAGGGCTaGGGCAGGAGGAGCGTGGGA +
Preference number: 2 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAWTPEG*GRRSVG
Trigger: TCCCACGCTCCTCCTGCCCCAGCCCTCTGGTGTCCA...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp CCGCCTCGTGCTCCTGCACGGGGTTCAGCAGAGGCGTGTTGTAGCTCTTGGAGCCCTCAGTCACGCCCCTaGACTCATGTACCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: PPRAPARGSAEACCSSWSPQSRP*THVPPA
Trigger: TGCAGGGGGTACATGAGTCCAGGGGCGTGACTGAGG...GCTCCAAGAGCTACAACACGCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431834.5
3UTR-3UTR CCA 90 bp GTGAGGCCTCACACGACACTCTGCCGGCCCCCAGAGCCCTCCAAGTCGGACATGGTAGGTGCCCAGGTATaGCGACACCACCTTCTGGAC +
Preference number: 2 (lower is better)
Translates to: VRPHTTLCRPPEPSKSDMVGAQV*RHHLLD
Trigger: GTCCAGAAGGTGGTGTCGCCATACCTGGGCACCTAC...CATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGCCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431834.5
3UTR-3UTR TCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTGCCGACTCAGATGCCTaGAACAGACCTGGGCCGAGC +
Preference number: 2 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIADSDA*NRPGPS
Trigger: GCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGC...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR TCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGCCGACTCAGATGCCTaGAACAGACCTGGGCCGAGC +
Preference number: 2 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAADSDA*NRPGPS
Trigger: GCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGC...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR GCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTAAACGCCGACTCAGATaGCTGAAACAGACCTGGGCC +
Preference number: 2 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVKRRLR*LKQTWA
Trigger: GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTT...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR GCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGAAACGCCGACTCAGATaGCTGAAACAGACCTGGGCC +
Preference number: 2 (lower is better)
Translates to: TGVLESGHFGARRGQSPLKRRLR*LKQTWA
Trigger: GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTT...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR GCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCAAACGCCGACTCAGATaGCTGAAACAGACCTGGGCC +
Preference number: 2 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAKRRLR*LKQTWA
Trigger: GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTT...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTATGCCTGAAACAGACCTaGGCCGAGCAAGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: VLESGHFGARRGQSPLGLCLKQT*AEQGRL
Trigger: CAGCCTTCCTTGCTCGGCCCAGGTCTGTTTCAGGCA...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGGTTTACATTCTCTGTaGGCAGGTGTGGACACCAGA +
Preference number: 2 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWGLHSL*AGVDTR
Trigger: TCTGGTGTCCACACCTGCCCACAGAGAATGTAAACC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp AATCCCTTCAGAATCCGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCTCCAGGGGGCTGGGTCGTaGGGTACAGTCTGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: NPFRIRVHGLQDLVHQVLQGAGS*GTVCWG
Trigger: GCCCCAGCAGACTGTACCCCACGACCCAGCCCCCTG...GAGAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAGGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR-3UTR TCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTGACAGAAATACAAAGTaGCCAAGGCCAGTGACGAGG +
Preference number: 2 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVDRNTK*PRPVTR
Trigger: CCTCGTCACTGGCCTTGGTCACTTTGTATTTCTGTC...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR TCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGACAGAAATACAAAGTaGCCAAGGCCAGTGACGAGG +
Preference number: 2 (lower is better)
Translates to: TGVLESGHFGARRGQSPLDRNTK*PRPVTR
Trigger: CCTCGTCACTGGCCTTGGTCACTTTGTATTTCTGTC...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR TCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTCCGAGCAAGGAAGGCTaGTGGTATTTCCAACCAAGA +
Preference number: 2 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVPSKEG*WYFQPR
Trigger: TCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGG...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR GCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTGAGGAGGCGCTTTTCTaGAGCACCAGCAGCATCTGC +
Preference number: 2 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIEEALF*STSSIC
Trigger: GCAGATGCTGCTGGTGCTGCAGAAAAGCGCCTCCTC...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432916.5
3UTR-3UTR CCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTTGCCTGAAACAGACCTaGGCCGAGCAAGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYICLKQT*AEQGRL
Trigger: CAGCCTTCCTTGCTCGGCCCAGGTCTGTTTCAGGCA...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCATGCCTGAAACAGACCTaGGCCGAGCAAGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGACLKQT*AEQGRL
Trigger: CAGCCTTCCTTGCTCGGCCCAGGTCTGTTTCAGGCA...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTCTCTGTaGGCAGGTGTGGACACCAGA +
Preference number: 2 (lower is better)
Translates to: TGVLESGHFGARRGQSPLGLHSL*AGVDTR
Trigger: TCTGGTGTCCACACCTGCCCACAGAGAATGTAAACC...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR TCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCCCGAGCAAGGAAGGCTaGTGGTATTTCCAACCAAGA +
Preference number: 2 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTPSKEG*WYFQPR
Trigger: TCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGG...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR GCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCAAACGCCGACTCAGATaGCTGAAACAGACCTGGGCC +
Preference number: 2 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGKRRLR*LKQTWA
Trigger: GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTT...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR GCA 90 bp AAAATCCCTTCAGAATCCGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCGTGGGATCCAAGCCCTaGTCAGGGGGCTGGGTCGTG +
Preference number: 2 (lower is better)
Translates to: KIPSESESTDSRIWSTRFVGSKP*SGGWVV
Trigger: CACGACCCAGCCCCCTGAGCAGGGCTTGGATCCCAC...GAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAGGGATTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR-3UTR TCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCCCGAGCAAGGAAGGCTaGTGGTATTTCCAACCAAGA +
Preference number: 2 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGPSKEG*WYFQPR
Trigger: TCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGG...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR GCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGAAACGCCGACTCAGATaGCTGAAACAGACCTGGGCC +
Preference number: 2 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWKRRLR*LKQTWA
Trigger: GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTT...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR GCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAAGGAGGAGACAGGTGTaGTGGAGTCTGGTCACTTTG +
Preference number: 2 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGARRRQV*WSLVTL
Trigger: CAAAGTGACCAGACTCCAGCACACCTGTCTCCTCCT...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp AATCCCTTCAGAATCCGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCTCTGCCTGAAACAGACCTaGGCCGAGCAAGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: NPFRIRVHGLQDLVHQVLCLKQT*AEQGRL
Trigger: CAGCCTTCCTTGCTCGGCCCAGGTCTGTTTCAGGCA...GAGAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAGGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432916.5
3UTR-3UTR CCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAACAGCTGGCGCACCGATaGCTCCTTGCCCTGCACCGG +
Preference number: 2 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQQLAHR*LLALHR
Trigger: CCGGTGCAGGGCAAGGAGCCATCGGTGCGCCAGCTG...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR-3UTR TCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGCCGAGCAAGGAAGGCTaGTGGTATTTCCAACCAAGA +
Preference number: 2 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWPSKEG*WYFQPR
Trigger: TCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGG...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAAGGAGTCTGGTCACTTTaGGGCCCGGCGTGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQGVWSL*GPAWAE
Trigger: CTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCC...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR TCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAAGCCGACTCAGATGCCTaGAACAGACCTGGGCCGAGC +
Preference number: 2 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQADSDA*NRPGPS
Trigger: GCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGC...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR CCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAAGTGGGCAGAGCCCACTaGGTTTACATTCTCTGTGGG +
Preference number: 2 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQVGRAH*VYILCG
Trigger: CCCACAGAGAATGTAAACCCAGTGGGCTCTGCCCAC...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR TCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAAGACAGAAATACAAAGTaGCCAAGGCCAGTGACGAGG +
Preference number: 2 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQDRNTK*PRPVTR
Trigger: CCTCGTCACTGGCCTTGGTCACTTTGTATTTCTGTC...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR-3UTR TCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAACCGAGCAAGGAAGGCTaGTGGTATTTCCAACCAAGA +
Preference number: 2 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQPSKEG*WYFQPR
Trigger: TCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGG...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR TCA 72 bp CCGGTGGGGCCCTGGCCGGGCGGGTCGGAGAAGCCCTaGGGCTCGGGGCAGGACGTCATCTCCGACACAGAG +
Preference number: 3 (lower is better)
Translates to: PVGPWPGGSEKP*GSGQDVISDTE
Trigger: CTCTGTGTCGGAGATGACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAGGGCCCCACCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR GCA 72 bp GCTCGGGGCAGGACGTCATCTCCGACACAGAGTGCCTaGGGATGCTGGTACCGCCGGCCGCCGCGCCCTCCG +
Preference number: 3 (lower is better)
Translates to: ARGRTSSPTQSA*GCWYRRPPRPP
Trigger: CGGAGGGCGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGGAGATGACGTCCTGCCCCGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR CCA 72 bp GGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTaGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCC +
Preference number: 3 (lower is better)
Translates to: GGAWERAADPRL*PGPWVNADSDA
Trigger: GGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR CCA 72 bp GGGTGGGATCCAAGCCCTGCTCAGGGGGCTGGGTCGTaGGGTACAGTCTGCTGGGGCAGGGCCCTGAGTGGG +
Preference number: 3 (lower is better)
Translates to: GWDPSPAQGAGS*GTVCWGRALSG
Trigger: CCCACTCAGGGCCCTGCCCCAGCAGACTGTACCCCACGACCCAGCCCCCTGAGCAGGGCTTGGATCCCACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR GCA 72 bp GCGGAGGAGGCGCTTTTCTGCAGCACCAGCAGCATCTaGACGATGGCAGGGGGCACACGGGCATGGGCCCGG +
Preference number: 3 (lower is better)
Translates to: AEEALFCSTSSI*TMAGGTRAWAR
Trigger: CCGGGCCCATGCCCGTGTGCCCCCTGCCATCGTGCAGATGCTGCTGGTGCTGCAGAAAAGCGCCTCCTCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432916.5
3UTR CCA 72 bp CGGACTCCAGGATCTGGTCCACCAGGTTCTCCGGGCTaGAGCGGGGCAGGGAGCTGCGGGTGGGATCCAAGC +
Preference number: 3 (lower is better)
Translates to: RTPGSGPPGSPG*SGAGSCGWDPS
Trigger: GCTTGGATCCCACCCGCAGCTCCCTGCCCCGCTCCAGCCCGGAGAACCTGGTGGACCAGATCCTGGAGTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR CCA 72 bp CCCCTCGCTGGAGTGGAGGCCGTAGGTGCCCAGGTATaGCGACACCACCTTCTGGACCAGCGTCTCCAGGCG +
Preference number: 3 (lower is better)
Translates to: PLAGVEAVGAQV*RHHLLDQRLQA
Trigger: CGCCTGGAGACGCTGGTCCAGAAGGTGGTGTCGCCATACCTGGGCACCTACGGCCTCCACTCCAGCGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431834.5
3UTR CCA 72 bp GCGTGTTGTAGCTCTTGGAGCGCACCACAGGGTTCTTaGCCAGCACGTCCCCCGAGCGGGAGCGGCGGAGGA +
Preference number: 3 (lower is better)
Translates to: ACCSSWSAPQGS*PARPPSGSGGG
Trigger: TCCTCCGCCGCTCCCGCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCGCTCCAAGAGCTACAACACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR CCA 72 bp AGCAGCATCTGCACGATGGCAGGGGGCACACGGGCATaGGCCCGGGCCAGCGCATCCTCTAGCTTCACACTG +
Preference number: 3 (lower is better)
Translates to: SSICTMAGGTRA*ARASASSSFTL
Trigger: CAGTGTGAAGCTAGAGGATGCGCTGGCCCGGGCCCATGCCCGTGTGCCCCCTGCCATCGTGCAGATGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR GCA 72 bp AACTCAAGGCCAGCTGTGAGGCCTCACACGACACTCTaGCGGCCCCCAGAGCCCTCCAAGTCGGACATGCCA +
Preference number: 3 (lower is better)
Translates to: NSRPAVRPHTTL*RPPEPSKSDMP
Trigger: TGGCATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGCCTCACAGCTGGCCTTGAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR CCA 72 bp CCTGCACGGGGTTCAGCAGAGGCGTGTTGTAGCTCTTaGAGCGCACCACAGGGTTCTTGGCCAGCACGTCCC +
Preference number: 3 (lower is better)
Translates to: PARGSAEACCSS*SAPQGSWPARP
Trigger: GGGACGTGCTGGCCAAGAACCCTGTGGTGCGCTCCAAGAGCTACAACACGCCTCTGCTGAACCCCGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR CCA 72 bp ATCCCTTCAGAATCCGAGTCCACGGACTCCAGGATCTaGTCCACCAGGTTCTCCGGGCTGGAGCGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: IPSESESTDSRI*STRFSGLERGR
Trigger: CCTGCCCCGCTCCAGCCCGGAGAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR-3UTR CAA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCATGGAGTCTGGTCACTTaGGGGCCCGGCGTGGGCAGA +
Preference number: 3 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAWSLVT*GPGVGR
Trigger: TCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR CCA 72 bp AGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTaGGCAGAGCCCACTGGGTTTACATTCTCTGTGGGC +
Preference number: 3 (lower is better)
Translates to: RCAGVWSLWGPA*AEPTGFTFSVG
Trigger: GCCCACAGAGAATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR TCA 72 bp CACAGGGACGTGTCAGTAAAAACTCAAGGCCAGCTGTaGGGCCTCACACGACACTCTGCCGGCCCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: HRDVSVKTQGQL*GLTRHSAGPQS
Trigger: GCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGCCTCACAGCTGGCCTTGAGTTTTTACTGACACGTCCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR GCA 72 bp TCTAGCTTCACACTGAGGGTGATGGCATTCCGGAAGTaGAGCAGGGCCAGCTGGCGCACCGATGGCTCCTTG +
Preference number: 3 (lower is better)
Translates to: SSFTLRVMAFRK*SRASWRTDGSL
Trigger: CAAGGAGCCATCGGTGCGCCAGCTGGCCCTGCTGCACTTCCGGAATGCCATCACCCTCAGTGTGAAGCTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
3UTR-3UTR CAA 90 bp AAAATCCCTTCAGAATCCGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCTGGAGTCTGGTCACTTaGGGGCCCGGCGTGGGCAGA +
Preference number: 3 (lower is better)
Translates to: KIPSESESTDSRIWSTRFWSLVT*GPGVGR
Trigger: TCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA...GAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAGGGATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432916.5
3UTR CCA 72 bp CTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTaGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACC +
Preference number: 3 (lower is better)
Translates to: LGKRRLRCLKQT*AEQGRLMVFPT
Trigger: GGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
3UTR TCA 72 bp GCTGATGGTATTTCCAACCAAGACAGAAATACAAAGTaGCCAAGGCCAGTGACGAGGCCGATAGGGCTGGCG +
Preference number: 3 (lower is better)
Translates to: ADGISNQDRNTK*PRPVTRPIGLA
Trigger: CGCCAGCCCTATCGGCCTCGTCACTGGCCTTGGTCACTTTGTATTTCTGTCTTGGTTGGAAATACCATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGCGCCGGGGAGGACCTaGAGGTCCCGGTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWAPGRT*RSRWGP
Trigger: AGGGCCCCACCGGGACCTTCAGGTCCTCCCCGGCGC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGAGTGCCTGCGGATGCTaGTACCGCCGGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWSACGC*YRRPPR
Trigger: GCGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACT...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GGGGAGGACCTGAAGGTCCCGGTGGGGCCCTGGCCGGGCGGGTCGGAGAAGCCCGGGTCGGAGAAGCCCTaGGGCTCGGGGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: GEDLKVPVGPWPGGSEKPGSEKP*GSGQDV
Trigger: GACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCC...GGGCTTCTCCGACCCGCCCGGCCAGGGCCCCACCGGGACCTTCAGGTCCTCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGGCAGCCCCTTGCGCTaGAAGACGGCGATCACCCCG +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWGSPLR*KTAITP
Trigger: CGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp AGGTCCCGGTGGGGCCCTGGCCGGGCGGGTCGGAGAAGCCCTGAGGCTCGGGGCGGCAGCCCCTTGCGCTaGAAGACGGCGATCACCCCG +
Preference number: 4 (lower is better)
Translates to: RSRWGPGRAGRRSPEARGGSPLR*KTAITP
Trigger: CGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCC...GCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAGGGCCCCACCGGGACCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGCCGACACAGAGTGCCTaGGGATGCTGGTACCGCCGG +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWPTQSA*GCWYRR
Trigger: CCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGG...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGTGGGATCCAAGCCCTaGTCAGGGGGCTGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWVGSKP*SGGWVV
Trigger: CACGACCCAGCCCCCTGAGCAGGGCTTGGATCCCAC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGGAGCTGCCCCCGACTaGACCCTATGCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWGAAPD*TLCREA
Trigger: GGCTTCCCTGCATAGGGTGCAGTCGGGGGCAGCTCC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS-3UTR CCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGAGGCTGAAGAGCTCCTaGTCGGGCAGCCCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWRLKSS*SGSPLR
Trigger: GCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCT...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp AGGTCCCGGTGGGGCCCTGGCCGGGCGGGTCGGAGAAGCCCTGAGGCTCGGGGCTGGGGTACAGTCTGCTaGGGCAGGGCCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RSRWGPGRAGRRSPEARGWGTVC*GRALSG
Trigger: CCCACTCAGGGCCCTGCCCCAGCAGACTGTACCCCA...GCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAGGGCCCCACCGGGACCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp AGGTCCCGGTGGGGCCCTGGCCGGGCGGGTCGGAGAAGCCCTGAGGCTCGGGGCCCCTGCTCAGGGGGCTaGGTCGTGGGGTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: RSRWGPGRAGRRSPEARGPCSGG*VVGYSL
Trigger: CAGACTGTACCCCACGACCCAGCCCCCTGAGCAGGG...GCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAGGGCCCCACCGGGACCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGCAGGGAGCTGCGGGTaGGATCCAAGCCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWAGSCG*DPSPAQ
Trigger: CTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGGATGCAGGAATGGGTaGAGGGCCCCTCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWGCRNG*RAPRWS
Trigger: ACTCCAGCGAGGGGCCCTTCACCCATTCCTGCATCC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp TGGAGCGGGGCAGGGAGCTGCGGGTGGGATCCAAGCCCTGCTCAGGGGGCTGGGCAGAGTGCCTGCGGATaGTGGTACCGCCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: WSGAGSCGWDPSPAQGAGQSACG*WYRRPP
Trigger: CGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTG...CCCAGCCCCCTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGCCCCGCTCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp CGACACAGAGTGCCTGCGGATGCTGGTACCGCCGGCCGCCGCGCCCTCCGCCTCCAGCTGGCGCACCGATaGCTCCTTGCCCTGCACCGG +
Preference number: 4 (lower is better)
Translates to: RHRVPADAGTAGRRALRLQLAHR*LLALHR
Trigger: CCGGTGCAGGGCAAGGAGCCATCGGTGCGCCAGCTG...GAGGCGGAGGGCGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGCAGCATCTGCACGATaGCAGGGGGCACACGGGCAT +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWAASAR*QGAHGH
Trigger: ATGCCCGTGTGCCCCCTGCCATCGTGCAGATGCTGC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCGCCGCGCCCTCCGCCTCGTGCTCCTGCACGGGGTTCAGCAGAGGCGTGTTGTAGTGCCTGCGGATGCTaGTACCGCCGGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: PPRPPPRAPARGSAEACCSACGC*YRRPPR
Trigger: GCGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACT...ACAACACGCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGCGGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGCTCTGGCCCGGCCCCTaGGTAAACGCCGACTCAGAT +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWLWPGP*VNADSD
Trigger: ATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAG...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CGCCGGGGAGGACCTGAAGGTCCCGGTGGGGCCCTGGCCGGGCGGGTCGGAGAACTTTGGGGCCCGGCGTaGGCAGAGCCCACTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RRGGPEGPGGALAGRVGELWGPA*AEPTGF
Trigger: AAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAG...TTCTCCGACCCGCCCGGCCAGGGCCCCACCGGGACCTTCAGGTCCTCCCCGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000432916.5
CDS-3UTR CCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGAGGTGTGCTGGAGTCTaGTCACTTTGGGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWRCAGV*SLWGPA
Trigger: CGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCT...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGCGCCGGGGAGGACCTaGAGGTCCCGGTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWAPGRT*RSRWGP
Trigger: AGGGCCCCACCGGGACCTTCAGGTCCTCCCCGGCGC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GCAGGGCCAGCTGGCGCACCGATGGCTCCTTGCCCTGCACCGGGTAGAAGATGGGCGCCGGGGAGGACCTaGAGGTCCCGGTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: AGPAGAPMAPCPAPGRRWAPGRT*RSRWGP
Trigger: AGGGCCCCACCGGGACCTTCAGGTCCTCCCCGGCGC...CCATCTTCTACCCGGTGCAGGGCAAGGAGCCATCGGTGCGCCAGCTGGCCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGTCTGCTCTGCGACCTTaGCTGAGGTCTGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWSALRP*LRSAPS
Trigger: GGAGGGTGCAGACCTCAGCCAAGGTCGCAGAGCAGA...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR CCA 90 bp GCACCACAGGGTTCTTGGCCAGCACGTCCCCCGAGCGGGAGCGGCGGAGGAGGCCAGGGGGCTGGGTCGTaGGGTACAGTCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: APQGSWPARPPSGSGGGGQGAGS*GTVCWG
Trigger: GCCCCAGCAGACTGTACCCCACGACCCAGCCCCCTG...GCCTCCTCCGCCGCTCCCGCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR TCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTGCGCCGGGGAGGACCTaGAGGTCCCGGTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVAPGRT*RSRWGP
Trigger: AGGGCCCCACCGGGACCTTCAGGTCCTCCCCGGCGC...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCTGGCCGGGCGGGTCGGAGAAGCCCTGAGGCTCGGGGCAGGACGTCATCTCCGGGTCGGGCAGCCCCTTaGGCTGGAAGACGGCGATCA +
Preference number: 4 (lower is better)
Translates to: PGRAGRRSPEARGRTSSPGRAAP*AGRRRS
Trigger: TGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACC...CGGAGATGACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGACTCATGTACCCCCTaGAGCACCAGCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWDSCTP*STSSIC
Trigger: GCAGATGCTGCTGGTGCTGCAGGGGGTACATGAGTC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GACGTCATCTCCGACACAGAGTGCCTGCGGATGCTGGTACCGCCGGCCGCCGCGCCTCCAAGTCGGACATaGCAGAGCCCCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: DVISDTECLRMLVPPAAAPPSRT*QSPGPG
Trigger: GCCGGGGCCGGGGCTCTGGCATGTCCGACTTGGAGG...CGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGGAGATGACGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp CCTGGCCGGGCGGGTCGGAGAAGCCCTGAGGCTCGGGGCAGGACGTCATCTCCGTGCAGCAGGGCCAGCTaGCGCACCGATGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PGRAGRRSPEARGRTSSPCSRAS*RTDGSL
Trigger: CAAGGAGCCATCGGTGCGCCAGCTGGCCCTGCTGCA...CGGAGATGACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp CGACACAGAGTGCCTGCGGATGCTGGTACCGCCGGCCGCCGCGCCCTCCGCCTCGCAGCATCTGCACGATaGCAGGGGGCACACGGGCAT +
Preference number: 4 (lower is better)
Translates to: RHRVPADAGTAGRRALRLAASAR*QGAHGH
Trigger: ATGCCCGTGTGCCCCCTGCCATCGTGCAGATGCTGC...GAGGCGGAGGGCGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGTAGGTGCCCAGGTATaGCGACACCACCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWVGAQV*RHHLLD
Trigger: GTCCAGAAGGTGGTGTCGCCATACCTGGGCACCTAC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp TGGCCAGCACGTCCCCCGAGCGGGAGCGGCGGAGGAGGCGCTTTTCCAGGATGCCAGGGGGCTGGGTCGTaGGGTACAGTCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WPARPPSGSGGGGAFPGCQGAGS*GTVCWG
Trigger: GCCCCAGCAGACTGTACCCCACGACCCAGCCCCCTG...GCATCCTGGAAAAGCGCCTCCTCCGCCGCTCCCGCTCGGGGGACGTGCTGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR TCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGTGGGCAGCACGTCACTaGAGAAGAAGTCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWWAARH*RRSPRS
Trigger: AGACCTGGGACTTCTTCTTCAGTGACGTGCTGCCCA...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GCGCACCACAGGGTTCTTGGCCAGCACGTCCCCCGAGCGGGAGCGGCGGAGGAGGGATGCAGGAATGGGTaGAGGGCCCCTCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: AHHRVLGQHVPRAGAAEEGCRNG*RAPRWS
Trigger: ACTCCAGCGAGGGGCCCTTCACCCATTCCTGCATCC...CTCCTCCGCCGCTCCCGCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR TCA 90 bp CCTTCTGGACCAGCGTCTCCAGGCGCAGGTAGTCCTCAGTCACGCCCCTGGACTGCGCCGGGGAGGACCTaGAGGTCCCGGTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PSGPASPGAGSPQSRPWTAPGRT*RSRWGP
Trigger: AGGGCCCCACCGGGACCTTCAGGTCCTCCCCGGCGC...AGTCCAGGGGCGTGACTGAGGACTACCTGCGCCTGGAGACGCTGGTCCAGAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR GCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGCGCCCTCCGCCTCGTaGTCCTGCACGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWAPSAS*SCTGFS
Trigger: GCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGCAGAGTGCCTGCGGATaGTGGTACCGCCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWQSACG*WYRRPP
Trigger: CGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTG...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGAGGCCTCACACGACACTCTGCCGGCCCCCAGAGCCCTCCAAGTCGGACATGAGTGCCTGCGGATGCTaGTACCGCCGGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: VRPHTTLCRPPEPSKSDMSACGC*YRRPPR
Trigger: GCGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACT...CATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGCCTCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp CCTGGCCGGGCGGGTCGGAGAAGCCCTGAGGCTCGGGGCAGGACGTCATCTCCGCTCTGGCCCGGCCCCTaGGTAAACGCCGACTCAGAT +
Preference number: 4 (lower is better)
Translates to: PGRAGRRSPEARGRTSSPLWPGP*VNADSD
Trigger: ATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAG...CGGAGATGACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432916.5
CDS-3UTR CCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGCCGACCCCCGTCTCTaGCCCGGCCCCTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWADPRL*PGPWVN
Trigger: GTTTACCCAGGGGCCGGGCCAGAGACGGGGGTCGGC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGTGGGCAGAGCCCACTaGGTTTACATTCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWVGRAH*VYILCG
Trigger: CCCACAGAGAATGTAAACCCAGTGGGCTCTGCCCAC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGGGTCGGAGAAGCCCTaGGGCTCGGGGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAGSEKP*GSGQDV
Trigger: GACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCC...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GCCCTGAGGCTCGGGGCAGGACGTCATCTCCGACACAGAGTGCCTGCGGATGCTGGGTCGGAGAAGCCCTaGGGCTCGGGGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: ALRLGAGRHLRHRVPADAGSEKP*GSGQDV
Trigger: GACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCC...AGCATCCGCAGGCACTCTGTGTCGGAGATGACGTCCTGCCCCGAGCCTCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR TCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCGCGCCGGGGAGGACCTaGAGGTCCCGGTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGAPGRT*RSRWGP
Trigger: AGGGCCCCACCGGGACCTTCAGGTCCTCCCCGGCGC...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp AGGGAGCTGCGGGTGGGATCCAAGCCCTGCTCAGGGGGCTGGGTCGTGGGGTACTCCGCCTCGTGCTCCTaGACGGGGTTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RELRVGSKPCSGGWVVGYSASCS*TGFSRG
Trigger: GCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGGA...GTACCCCACGACCCAGCCCCCTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGCGCCCTCCGCCTCGTaGTCCTGCACGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAAPSAS*SCTGFS
Trigger: GCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGC...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTGCGCCCTCCGCCTCGTaGTCCTGCACGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVAPSAS*SCTGFS
Trigger: GCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGC...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GTAGCTCTTGGAGCGCACCACAGGGTTCTTGGCCAGCACGTCCCCCGAGCGGGAGCGCCCTCCGCCTCGTaGTCCTGCACGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VALGAHHRVLGQHVPRAGAPSAS*SCTGFS
Trigger: GCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGC...TCCCGCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCGCTCCAAGAGCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGCGCCCTCCGCCTCGTaGTCCTGCACGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLAPSAS*SCTGFS
Trigger: GCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGC...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTCAGAGTGCCTGCGGATaGTGGTACCGCCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVQSACG*WYRRPP
Trigger: CGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTG...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CGACACAGAGTGCCTGCGGATGCTGGTACCGCCGGCCGCCGCGCCCTCCGCCTCATCTCCGACACAGAGTaGCTGCGGATGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: RHRVPADAGTAGRRALRLISDTE*LRMLVP
Trigger: CGGTACCAGCATCCGCAGGCACTCTGTGTCGGAGAT...GAGGCGGAGGGCGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGCCTCCAAGTCGGACATaGCAGAGCCCCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLPPSRT*QSPGPG
Trigger: GCCGGGGCCGGGGCTCTGGCATGTCCGACTTGGAGG...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTCCTCCAAGTCGGACATaGCAGAGCCCCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVPPSRT*QSPGPG
Trigger: GCCGGGGCCGGGGCTCTGGCATGTCCGACTTGGAGG...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGAGGAGGAGACAGGTGTaGTGGAGTCTGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWRRRQV*WSLVTL
Trigger: CAAAGTGACCAGACTCCAGCACACCTGTCTCCTCCT...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGGATGCTGTTCCAGGTaGCGTTGGCGCAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWGCCSR*RWRRPG
Trigger: GCCGGGCCTGCGCCAACGCCACCTGGAACAGCATCC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGGCAGCCCCTTGCGCTaGAAGACGGCGATCACCCCG +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWGSPLR*KTAITP
Trigger: CGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGCCTTTTGTCAGCAGCTaGTTCTGCAGGTACTCCGTG +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWPFVSS*FCRYSV
Trigger: CACGGAGTACCTGCAGAACCAGCTGCTGACAAAAGG...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGCAGCTGGCGCACCGATaGCTCCTTGCCCTGCACCGG +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWQLAHR*LLALHR
Trigger: CCGGTGCAGGGCAAGGAGCCATCGGTGCGCCAGCTG...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp TCATCTCCGACACAGAGTGCCTGCGGATGCTGGTACCGCCGGCCGCCGCGCCCTGCACCACAGGGTTCTTaGCCAGCACGTCCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: SSPTQSACGCWYRRPPRPAPQGS*PARPPS
Trigger: GCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGC...AGGGCGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGGAGATGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp TCATCTCCGACACAGAGTGCCTGCGGATGCTGGTACCGCCGGCCGCCGCGCCCTTGGGGTACAGTCTGCTaGGGCAGGGCCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SSPTQSACGCWYRRPPRPWGTVC*GRALSG
Trigger: CCCACTCAGGGCCCTGCCCCAGCAGACTGTACCCCA...AGGGCGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGGAGATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp GAGCGGGGCAGGGAGCTGCGGGTGGGATCCAAGCCCTGCTCAGGGGGCTGGGTCACGGACTCCAGGATCTaGTCCACCAGGTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: ERGRELRVGSKPCSGGWVTDSRI*STRFSG
Trigger: CCCGGAGAACCTGGTGGACCAGATCCTGGAGTCCGT...GACCCAGCCCCCTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGCCCCGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTGCCGACCCCCGTCTCTaGCCCGGCCCCTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVADPRL*PGPWVN
Trigger: GTTTACCCAGGGGCCGGGCCAGAGACGGGGGTCGGC...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp CTCCGACACAGAGTGCCTGCGGATGCTGGTACCGCCGGCCGCCGCGCCCTCCGCTGGGCAGCACGTCACTaGAGAAGAAGTCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LRHRVPADAGTAGRRALRWAARH*RRSPRS
Trigger: AGACCTGGGACTTCTTCTTCAGTGACGTGCTGCCCA...GCGGAGGGCGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR TCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAGGGTCGGAGAAGCCCTaGGGCTCGGGGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLGSEKP*GSGQDV
Trigger: GACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCC...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GGGCAGGGAGCTGCGGGTGGGATCCAAGCCCTGCTCAGGGGGCTGGGTCGTGGGACTCAAGGCCAGCTGTaGGGCCTCACACGACACTCT +
Preference number: 4 (lower is better)
Translates to: GQGAAGGIQALLRGLGRGTQGQL*GLTRHS
Trigger: AGAGTGTCGTGTGAGGCCTCACAGCTGGCCTTGAGT...CCCACGACCCAGCCCCCTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp CGCTTTTCCAGGATGCAGGAATGGGTGAAGGGCCCCTCGCTGGAGTGGAGGCCGGCGCCCTCCGCCTCGTaGTCCTGCACGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: RFSRMQEWVKGPSLEWRPAPSAS*SCTGFS
Trigger: GCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGC...CGGCCTCCACTCCAGCGAGGGGCCCTTCACCCATTCCTGCATCCTGGAAAAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR GCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAGCGCCCTCCGCCTCGTaGTCCTGCACGGGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLAPSAS*SCTGFS
Trigger: GCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGC...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCCAGAGTGCCTGCGGATaGTGGTACCGCCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTQSACG*WYRRPP
Trigger: CGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTG...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGCCGACACAGAGTGCCTaGGGATGCTGGTACCGCCGG +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWPTQSA*GCWYRR
Trigger: CCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGG...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTGGGATCCAAGCCCTaGTCAGGGGGCTGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWVGSKP*SGGWVV
Trigger: CACGACCCAGCCCCCTGAGCAGGGCTTGGATCCCAC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CGCGCCCTCCGCCTCGTGCTCCTGCACGGGGTTCAGCAGAGGCGTGTTGTAGCTGTGGGATCCAAGCCCTaGTCAGGGGGCTGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: RALRLVLLHGVQQRRVVAVGSKP*SGGWVV
Trigger: CACGACCCAGCCCCCTGAGCAGGGCTTGGATCCCAC...AGCTACAACACGCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCCCTCACACGACACTCTaGCGGCCCCCAGAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAPHTTL*RPPEPS
Trigger: GGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGG...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CGCCGGGGAGGACCTGAAGGTCCCGGTGGGGCCCTGGCCGGGCGGGTCGGAGAAAGGAGGAGACAGGTGTaGTGGAGTCTGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: RRGGPEGPGGALAGRVGERRRQV*WSLVTL
Trigger: CAAAGTGACCAGACTCCAGCACACCTGTCTCCTCCT...TTCTCCGACCCGCCCGGCCAGGGCCCCACCGGGACCTTCAGGTCCTCCCCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432916.5
CDS-3UTR CCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCTGTTCCAGGTGGCGTTaGCGCAGGCCCGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWACSRWR*RRPGAA
Trigger: AGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACA...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CCA 90 bp GATGGCATTCCGGAAGTGCAGCAGGGCCAGCTGGCGCACCGATGGCTCCTTGCCTGTTCCAGGTGGCGTTaGCGCAGGCCCGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: DGIPEVQQGQLAHRWLLACSRWR*RRPGAA
Trigger: AGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACA...GGCAAGGAGCCATCGGTGCGCCAGCTGGCCCTGCTGCACTTCCGGAATGCCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp GTGAGGCCTCACACGACACTCTGCCGGCCCCCAGAGCCCTCCAAGTCGGACATGTGTTCCAGGTGGCGTTaGCGCAGGCCCGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VRPHTTLCRPPEPSKSDMCSRWR*RRPGAA
Trigger: AGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACA...CATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGCCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp AGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCTCCGGGCTGGAGCGGGGCAGGATGCTGTTCCAGGTaGCGTTGGCGCAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SPRTPGSGPPGSPGWSGAGCCSR*RWRRPG
Trigger: GCCGGGCCTGCGCCAACGCCACCTGGAACAGCATCC...TGCCCCGCTCCAGCCCGGAGAACCTGGTGGACCAGATCCTGGAGTCCGTGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp TTGGAGCGCACCACAGGGTTCTTGGCCAGCACGTCCCCCGAGCGGGAGCGGCGGGCGATCACCCCGTTGTaGATGCTGTTCCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LERTTGFLASTSPERERRAITPL*MLFQVA
Trigger: CGCCACCTGGAACAGCATCCACAACGGGGTGATCGC...CCGCCGCTCCCGCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCGCTCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGGCAGCCCCTTGCGCTaGAAGACGGCGATCACCCCG +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAGSPLR*KTAITP
Trigger: CGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCC...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGAGGCCTCACACGACACTCTGCCGGCCCCCAGAGCCCTCCAAGTCGGACATGCAGCTGGCGCACCGATaGCTCCTTGCCCTGCACCGG +
Preference number: 4 (lower is better)
Translates to: VRPHTTLCRPPEPSKSDMQLAHR*LLALHR
Trigger: CCGGTGCAGGGCAAGGAGCCATCGGTGCGCCAGCTG...CATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGCCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGGCGACACCACCTTCTaGACCAGCGTCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWGDTTF*TSVSRR
Trigger: GCGCCTGGAGACGCTGGTCCAGAAGGTGGTGTCGCC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGCACCACAGGGTTCTTaGCCAGCACGTCCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWAPQGS*PARPPS
Trigger: GCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGTGCCTGCGGATGCTaGTACCGCCGGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGSACGC*YRRPPR
Trigger: GCGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACT...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGCAGGGGGCTGGGTCGTaGGGTACAGTCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLQGAGS*GTVCWG
Trigger: GCCCCAGCAGACTGTACCCCACGACCCAGCCCCCTG...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCCAGGGGGCTGGGTCGTaGGGTACAGTCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAQGAGS*GTVCWG
Trigger: GCCCCAGCAGACTGTACCCCACGACCCAGCCCCCTG...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CACCAGCAGCATCTGCACGATGGCAGGGGGCACACGGGCATGGGCCCGGGCCAGACGGACTCCAGGATCTaGTCCACCAGGTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: HQQHLHDGRGHTGMGPGQTDSRI*STRFSG
Trigger: CCCGGAGAACCTGGTGGACCAGATCCTGGAGTCCGT...CTGGCCCGGGCCCATGCCCGTGTGCCCCCTGCCATCGTGCAGATGCTGCTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCGCCGACCCCCGTCTCTaGCCCGGCCCCTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTADPRL*PGPWVN
Trigger: GTTTACCCAGGGGCCGGGCCAGAGACGGGGGTCGGC...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGCACCCTCCTGGGGGTaGGCTCTGAAACCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWAPSWG*ALKPCS
Trigger: TGAGCAGGGTTTCAGAGCTCACCCCCAGGAGGGTGC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR TCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGCTCTGCGACCTTGGCTaGGGTCTGCACCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLLCDLG*GLHPPG
Trigger: CCCAGGAGGGTGCAGACCTCAGCCAAGGTCGCAGAG...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR TCA 90 bp GCACGTCCCCCGAGCGGGAGCGGCGGAGGAGGCGCTTTTCTGCAGCACCAGCAGTCTGCAGGTACTCCGTaGAGAAGGACCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ARPPSGSGGGGAFLQHQQSAGTP*RRTPAL
Trigger: CAGAGCTGGGGTCCTTCTTCACGGAGTACCTGCAGA...CTGCTGGTGCTGCAGAAAAGCGCCTCCTCCGCCGCTCCCGCTCGGGGGACGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432916.5
CDS-3UTR TCA 90 bp GAGCGGGGCAGGGAGCTGCGGGTGGGATCCAAGCCCTGCTCAGGGGGCTGGGTCTGGGCAGCACGTCACTaGAGAAGAAGTCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: ERGRELRVGSKPCSGGWVWAARH*RRSPRS
Trigger: AGACCTGGGACTTCTTCTTCAGTGACGTGCTGCCCA...GACCCAGCCCCCTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGCCCCGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGCCCACGGGTCTCCTCTaGTCTGCGACCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWPTGLL*SATLAE
Trigger: CTCAGCCAAGGTCGCAGAGCAGAGGAGACCCGTGGG...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR GCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGGTCGGGCAGCCCCTTaGGCTGGAAGACGGCGATCA +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAGRAAP*AGRRRS
Trigger: TGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACC...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GATGGCATTCCGGAAGTGCAGCAGGGCCAGCTGGCGCACCGATGGCTCCTTGCCGTGGGATCCAAGCCCTaGTCAGGGGGCTGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: DGIPEVQQGQLAHRWLLAVGSKP*SGGWVV
Trigger: CACGACCCAGCCCCCTGAGCAGGGCTTGGATCCCAC...GGCAAGGAGCCATCGGTGCGCCAGCTGGCCCTGCTGCACTTCCGGAATGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGTGGGATCCAAGCCCTaGTCAGGGGGCTGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAVGSKP*SGGWVV
Trigger: CACGACCCAGCCCCCTGAGCAGGGCTTGGATCCCAC...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGTGGGATCCAAGCCCTaGTCAGGGGGCTGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLVGSKP*SGGWVV
Trigger: CACGACCCAGCCCCCTGAGCAGGGCTTGGATCCCAC...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp AGAAGCCCTGAGGCTCGGGGCAGGACGTCATCTCCGACACAGAGTGCCTGCGGACCTCACACGACACTCTaGCGGCCCCCAGAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RSPEARGRTSSPTQSACGPHTTL*RPPEPS
Trigger: GGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGG...TCCGCAGGCACTCTGTGTCGGAGATGACGTCCTGCCCCGAGCCTCAGGGCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCGGCTCGGGTGGGAGCTaGCCCCGACTGCACCCTATG +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTGSGGS*PRLHPM
Trigger: CATAGGGTGCAGTCGGGGGCAGCTCCCACCCGAGCC...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTCAGGGTGGGCACAGGTaGAATCCCAGCCCACGGGTC +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVQGGHR*NPSPRV
Trigger: GACCCGTGGGCTGGGATTCCACCTGTGCCCACCCTG...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR CCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGAGAGGACTCAGGAGGTaGGATGCTGCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWRGLRR*DAARVG
Trigger: GCCCACCCTGGCAGCATCCCACCTCCTGAGTCCTCT...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAGGATGCTGTTCCAGGTaGCGTTGGCGCAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLGCCSR*RWRRPG
Trigger: GCCGGGCCTGCGCCAACGCCACCTGGAACAGCATCC...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CCA 90 bp GGTGCCCAGGTATGGCGACACCACCTTCTGGACCAGCGTCTCCAGGCGCAGGTAGGCAGCCCCTTGCGCTaGAAGACGGCGATCACCCCG +
Preference number: 4 (lower is better)
Translates to: GAQVWRHHLLDQRLQAQVGSPLR*KTAITP
Trigger: CGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCC...TACCTGCGCCTGGAGACGCTGGTCCAGAAGGTGGTGTCGCCATACCTGGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR CCA 90 bp GCCCTGAGGCTCGGGGCAGGACGTCATCTCCGACACAGAGTGCCTGCGGATGCTAGGCTGAAGAGCTCCTaGTCGGGCAGCCCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: ALRLGAGRHLRHRVPADARLKSS*SGSPLR
Trigger: GCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCT...AGCATCCGCAGGCACTCTGTGTCGGAGATGACGTCCTGCCCCGAGCCTCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCAGGCTGAAGAGCTCCTaGTCGGGCAGCCCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWARLKSS*SGSPLR
Trigger: GCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCT...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACAGCTGGCGCACCGATaGCTCCTTGCCCTGCACCGG +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLQLAHR*LLALHR
Trigger: CCGGTGCAGGGCAAGGAGCCATCGGTGCGCCAGCTG...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGCAGCATCTGCACGATaGCAGGGGGCACACGGGCAT +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWAASAR*QGAHGH
Trigger: ATGCCCGTGTGCCCCCTGCCATCGTGCAGATGCTGC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTGCACCACAGGGTTCTTaGCCAGCACGTCCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVAPQGS*PARPPS
Trigger: GCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGC...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCAGTGCCTGCGGATGCTaGTACCGCCGGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGSACGC*YRRPPR
Trigger: GCGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACT...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGTGGGGTACAGTCTGCTaGGGCAGGGCCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLWGTVC*GRALSG
Trigger: CCCACTCAGGGCCCTGCCCCAGCAGACTGTACCCCA...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCCCCTGCTCAGGGGGCTaGGTCGTGGGGTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAPCSGG*VVGYSL
Trigger: CAGACTGTACCCCACGACCCAGCCCCCTGAGCAGGG...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGCAGGGAGCTGCGGGTaGGATCCAAGCCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAAGSCG*DPSPAQ
Trigger: CTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGC...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGTGGACACCAGAGGGCTaGGGCAGGAGGAGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLWTPEG*GRRSVG
Trigger: TCCCACGCTCCTCCTGCCCCAGCCCTCTGGTGTCCA...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTCTTTGGGGCCCGGCGTaGGCAGAGCCCACTGGGTTT +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVLWGPA*AEPTGF
Trigger: AAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAG...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTGGAGTCTGGTCACTTTaGGGCCCGGCGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVGVWSL*GPAWAE
Trigger: CTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCC...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGGAGTCTGGTCACTTTaGGGCCCGGCGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAGVWSL*GPAWAE
Trigger: CTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCC...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCGCGATCACCCCGTTGTaGATGCTCGGTCCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTAITPL*MLGPRA
Trigger: GGCGCGGGGACCGAGCATCCACAACGGGGTGATCGC...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617066.4
CDS-3UTR TCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTGGGTCGGAGAAGCCCTaGGGCTCGGGGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIGSEKP*GSGQDV
Trigger: GACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCC...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCGGGTCGGAGAAGCCCTaGGGCTCGGGGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGGSEKP*GSGQDV
Trigger: GACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCC...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGGGTCGGAGAAGCCCTaGGGCTCGGGGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAGSEKP*GSGQDV
Trigger: GACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCC...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGCCGACTCAGATGCCTaGAACAGACCTGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAADSDA*NRPGPS
Trigger: GCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGC...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGCCGACTCAGATGCCTaGAACAGACCTGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLADSDA*NRPGPS
Trigger: GCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGC...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp CGCCGCGCCCTCCGCCTCGTGCTCCTGCACGGGGTTCAGCAGAGGCGTGTTGTAGGCTGGGCGAACTCATaGACTTCAACCTGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: RRALRLVLLHGVQQRRVVGWANS*TSTCGE
Trigger: CTCTCCGCAGGTTGAAGTTCATGAGTTCGCCCAGCC...TACAACACGCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR TCA 90 bp AGGGAGCTGCGGGTGGGATCCAAGCCCTGCTCAGGGGGCTGGGTCGTGGGGTACCCAGGTCTCTGCCAGTaGGTCCAGCAGCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RELRVGSKPCSGGWVVGYPGLCQ*VQQLPH
Trigger: ATGAGGAAGCTGCTGGACTCACTGGCAGAGACCTGG...GTACCCCACGACCCAGCCCCCTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp CGCGCCCTCCGCCTCGTGCTCCTGCACGGGGTTCAGCAGAGGCGTGTTGTAGCTAGCACCAGCAGCATCTaGACGATGGCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: RALRLVLLHGVQQRRVVASTSSI*TMAGGT
Trigger: TGTGCCCCCTGCCATCGTGCAGATGCTGCTGGTGCT...AGCTACAACACGCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTATCCGCCTCGTGCTCCTaGACGGGGTTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLSASCS*TGFSRG
Trigger: GCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGGA...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCCAGAGTGCCTGCGGATaGTGGTACCGCCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGQSACG*WYRRPP
Trigger: CGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTG...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GTATGGCGACACCACCTTCTGGACCAGCGTCTCCAGGCGCAGGTAGTCCTCAGTCAGAGTGCCTGCGGATaGTGGTACCGCCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: VWRHHLLDQRLQAQVVLSQSACG*WYRRPP
Trigger: CGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTG...ACTGAGGACTACCTGCGCCTGGAGACGCTGGTCCAGAAGGTGGTGTCGCCATAC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR GCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCACAGAGTGCCTGCGGATaGTGGTACCGCCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAQSACG*WYRRPP
Trigger: CGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTG...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACCGACACAGAGTGCCTaGGGATGCTGGTACCGCCGG +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLPTQSA*GCWYRR
Trigger: CCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGG...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCTTCTGGACCAGCGTCTCCAGGCGCAGGTAGTCCTCAGTCACGCCCCTGGACTCCGACACAGAGTGCCTaGGGATGCTGGTACCGCCGG +
Preference number: 4 (lower is better)
Translates to: PSGPASPGAGSPQSRPWTPTQSA*GCWYRR
Trigger: CCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGG...AGTCCAGGGGCGTGACTGAGGACTACCTGCGCCTGGAGACGCTGGTCCAGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR GCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCCCGACACAGAGTGCCTaGGGATGCTGGTACCGCCGG +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTPTQSA*GCWYRR
Trigger: CCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGG...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCACCTCCAAGTCGGACATaGCAGAGCCCCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAPPSRT*QSPGPG
Trigger: GCCGGGGCCGGGGCTCTGGCATGTCCGACTTGGAGG...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGACCTCCAAGTCGGACATaGCAGAGCCCCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGPPSRT*QSPGPG
Trigger: GCCGGGGCCGGGGCTCTGGCATGTCCGACTTGGAGG...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAAGGGACTCGGGGCGCTaGAGGGGAGACTCGCCTAAG +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLRDSGR*RGDSPK
Trigger: CTTAGGCGAGTCTCCCCTGCAGCGCCCCGAGTCCCT...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611394.4
ENST00000617066.4
CDS-3UTR CCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGTCTGCTCTGCGACCTTaGCTGAGGTCTGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWSALRP*LRSAPS
Trigger: GGAGGGTGCAGACCTCAGCCAAGGTCGCAGAGCAGA...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR CCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCCAGGGTGGGCACAGGTaGAATCCCAGCCCACGGGTC +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTQGGHR*NPSPRV
Trigger: GACCCGTGGGCTGGGATTCCACCTGTGCCCACCCTG...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR CCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGGGATGCTGCCAGGGTaGGCACAGGTGGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAGMLPG*AQVESQ
Trigger: CTGGGATTCCACCTGTGCCCACCCTGGCAGCATCCC...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR CCA 90 bp TCCCCCGAGCGGGAGCGGCGGAGGAGGCGCTTTTCTGCAGCACCAGCAGCATCTGCGATCACCCCGTTGTaGATGCTGTTCCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SPERERRRRRFSAAPAASAITPL*MLFQVA
Trigger: CGCCACCTGGAACAGCATCCACAACGGGGTGATCGC...AGATGCTGCTGGTGCTGCAGAAAAGCGCCTCCTCCGCCGCTCCCGCTCGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432916.5
CDS-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCGGCAGCCCCTTGCGCTaGAAGACGGCGATCACCCCG +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGGSPLR*KTAITP
Trigger: CGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCC...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAAGGCTGAAGAGCTCCTaGTCGGGCAGCCCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLRLKSS*SGSPLR
Trigger: GCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCT...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCAGGCTGAAGAGCTCCTaGTCGGGCAGCCCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTRLKSS*SGSPLR
Trigger: GCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCT...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCCAGCTGGCGCACCGATaGCTCCTTGCCCTGCACCGG +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGQLAHR*LLALHR
Trigger: CCGGTGCAGGGCAAGGAGCCATCGGTGCGCCAGCTG...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGCAGCAGGGCCAGCTaGCGCACCGATGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTCSRAS*RTDGSL
Trigger: CAAGGAGCCATCGGTGCGCCAGCTGGCCCTGCTGCA...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGCAGCATCTGCACGATaGCAGGGGGCACACGGGCAT +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLAASAR*QGAHGH
Trigger: ATGCCCGTGTGCCCCCTGCCATCGTGCAGATGCTGC...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTGCAGCATCTGCACGATaGCAGGGGGCACACGGGCAT +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVAASAR*QGAHGH
Trigger: ATGCCCGTGTGCCCCCTGCCATCGTGCAGATGCTGC...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCGGCGACACCACCTTCTaGACCAGCGTCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTGDTTF*TSVSRR
Trigger: GCGCCTGGAGACGCTGGTCCAGAAGGTGGTGTCGCC...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAGGCGACACCACCTTCTaGACCAGCGTCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLGDTTF*TSVSRR
Trigger: GCGCCTGGAGACGCTGGTCCAGAAGGTGGTGTCGCC...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAGCACCACAGGGTTCTTaGCCAGCACGTCCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLAPQGS*PARPPS
Trigger: GCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGC...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGAGTGCCTGCGGATGCTaGTACCGCCGGCCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWSACGC*YRRPPR
Trigger: GCGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACT...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTATGGGGTACAGTCTGCTaGGGCAGGGCCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLWGTVC*GRALSG
Trigger: CCCACTCAGGGCCCTGCCCCAGCAGACTGTACCCCA...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACCCTGCTCAGGGGGCTaGGTCGTGGGGTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLPCSGG*VVGYSL
Trigger: CAGACTGTACCCCACGACCCAGCCCCCTGAGCAGGG...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCGCAGGGAGCTGCGGGTaGGATCCAAGCCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTAGSCG*DPSPAQ
Trigger: CTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGC...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGCTCTGGCCCGGCCCCTaGGTAAACGCCGACTCAGAT +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLLWPGP*VNADSD
Trigger: ATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAG...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAGCCGACCCCCGTCTCTaGCCCGGCCCCTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGADPRL*PGPWVN
Trigger: GTTTACCCAGGGGCCGGGCCAGAGACGGGGGTCGGC...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAGGAGTCTGGTCACTTTaGGGCCCGGCGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLGVWSL*GPAWAE
Trigger: CTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCC...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CGGGTCGGAGAAGCCCTGAGGCTCGGGGCAGGACGTCATCTCCGACACAGAGTGAGGTGTGCTGGAGTCTaGTCACTTTGGGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: RVGEALRLGAGRHLRHRVRCAGV*SLWGPA
Trigger: CGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCT...CACTCTGTGTCGGAGATGACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432916.5
CDS-3UTR CCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGCGATCACCCCGTTGTaGATGCTTGCTGGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWAITPL*MLAGCR
Trigger: TCGGCACCCAGCAAGCATCCACAACGGGGTGATCGC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS-3UTR TCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCGCACCCTCCTGGGGGTaGGCTCTGAAACCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTAPSWG*ALKPCS
Trigger: TGAGCAGGGTTTCAGAGCTCACCCCCAGGAGGGTGC...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR TCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGTCTGCAGGTACTCCGTaGAGAAGGACCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWSAGTP*RRTPAL
Trigger: CAGAGCTGGGGTCCTTCTTCACGGAGTACCTGCAGA...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCCCAGGTCTCTGCCAGTaGGTCCAGCAGCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAPGLCQ*VQQLLS
Trigger: GGACAGAAGCTGCTGGACTCACTGGCAGAGACCTGG...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAGGATGCAGGAATGGGTaGAGGGCCCCTCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLGCRNG*RAPRWS
Trigger: ACTCCAGCGAGGGGCCCTTCACCCATTCCTGCATCC...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp TGGAGCGGGGCAGGGAGCTGCGGGTGGGATCCAAGCCCTGCTCAGGGGGCTGGGGACAGAAATACAAAGTaGCCAAGGCCAGTGACGAGG +
Preference number: 4 (lower is better)
Translates to: WSGAGSCGWDPSPAQGAGDRNTK*PRPVTR
Trigger: CCTCGTCACTGGCCTTGGTCACTTTGTATTTCTGTC...CCCAGCCCCCTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGCCCCGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR TCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCGCCGACTCAGATGCCTaGAACAGACCTGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTADSDA*NRPGPS
Trigger: GCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGC...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCACTAAGCACACTGGATaGCTGGCCTTGGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWATKHTG*LALGAA
Trigger: GGCTGCCCCCAAGGCCAGGCATCCAGTGTGCTTAGT...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006251.11
ENST00000624862.3
CDS-3UTR GCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACCCACGGGTCTCCTCTaGTCTGCGACCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLPTGLL*SATLAE
Trigger: CTCAGCCAAGGTCGCAGAGCAGAGGAGACCCGTGGG...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR GCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCGGTCGGGCAGCCCCTTaGGCTGGAAGACGGCGATCA +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGGRAAP*AGRRRS
Trigger: TGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACC...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp TTGGAGCGCACCACAGGGTTCTTGGCCAGCACGTCCCCCGAGCGGGAGCGGCGGCCCGAAGGATCACCATaGCTTTTGTCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LERTTGFLASTSPERERRPEGSP*LLSAAG
Trigger: ACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGG...CCGCCGCTCCCGCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCGCTCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTAGCACCAGCAGCATCTaGACGATGGCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVSTSSI*TMAGGT
Trigger: TGTGCCCCCTGCCATCGTGCAGATGCTGCTGGTGCT...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGAGTGGAGGCCGTAGGTaGCCAGGTATGGCGACACCA +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLSGGRR*PGMATP
Trigger: TGGTGTCGCCATACCTGGGCACCTACGGCCTCCACT...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGCAGAGTGCCTGCGGATaGTGGTACCGCCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWQSACG*WYRRPP
Trigger: CGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTG...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CGTGTTGTAGCTCTTGGAGCGCACCACAGGGTTCTTGGCCAGCACGTCCCCCGACCGACACAGAGTGCCTaGGGATGCTGGTACCGCCGG +
Preference number: 4 (lower is better)
Translates to: RVVALGAHHRVLGQHVPRPTQSA*GCWYRR
Trigger: CCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGG...TCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCGCTCCAAGAGCTACAACACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGATCTCCGACACAGAGTaGCTGCGGATGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWISDTE*LRMLVP
Trigger: CGGTACCAGCATCCGCAGGCACTCTGTGTCGGAGAT...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGCCTCCAAGTCGGACATaGCAGAGCCCCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWPPSRT*QSPGPG
Trigger: GCCGGGGCCGGGGCTCTGGCATGTCCGACTTGGAGG...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCACCTCACACGACACTCTaGCGGCCCCCAGAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAPHTTL*RPPEPS
Trigger: GGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGG...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGACCTCACACGACACTCTaGCGGCCCCCAGAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGPHTTL*RPPEPS
Trigger: GGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGG...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GCAGGGCCAGCTGGCGCACCGATGGCTCCTTGCCCTGCACCGGGTAGAAGATGGCGCCGGGTTAATCATTaGACGGAGAGGCTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: AGPAGAPMAPCPAPGRRWRRVNH*TERLSV
Trigger: CACGCTGAGCCTCTCCGTGCAATGATTAACCCGGCG...CCATCTTCTACCCGGTGCAGGGCAAGGAGCCATCGGTGCGCCAGCTGGCCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR GCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACAAGCCCTCAGGCTaGGCCGGCATCTTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVYKPSG*AGIFSG
Trigger: CCCGGAAAAGATGCCGGCGCAGCCTGAGGGCTTGTA...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR GCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGTGGATGCTTGCTGGGTaGCGAGAGGACTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWWMLAG*REDSGG
Trigger: ACCTCCTGAGTCCTCTCGGCACCCAGCAAGCATCCA...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS-3UTR GCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTGGAGACTCGCCTAAGTaGGGCAAGCGGGTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIGDSPK*GKRVRG
Trigger: CCCGCGGACCCGCTTGCCGCACTTAGGCGAGTCTCC...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611394.4
ENST00000617066.4
CDS-3UTR GCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCGGAGACTCGCCTAAGTaGGGCAAGCGGGTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGGDSPK*GKRVRG
Trigger: CCCGCGGACCCGCTTGCCGCACTTAGGCGAGTCTCC...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611394.4
ENST00000617066.4
CDS-3UTR CCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGAGCACACTGGATGCCTaGCCTTGGGGGCAGCCGAAT +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLSTLDA*PWGQPN
Trigger: ATTCGGCTGCCCCCAAGGCCAGGCATCCAGTGTGCT...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006251.11
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTCTGCTCTGCGACCTTaGCTGAGGTCTGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVSALRP*LRSAPS
Trigger: GGAGGGTGCAGACCTCAGCCAAGGTCGCAGAGCAGA...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR CCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCAGAGGACTCAGGAGGTaGGATGCTGCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTRGLRR*DAARVG
Trigger: GCCCACCCTGGCAGCATCCCACCTCCTGAGTCCTCT...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGATGTTCCAGGTGGCGTTaGCGCAGGCCCGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGCSRWR*RRPGAA
Trigger: AGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACA...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTGGATGCTGTTCCAGGTaGCGTTGGCGCAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIGCCSR*RWRRPG
Trigger: GCCGGGCCTGCGCCAACGCCACCTGGAACAGCATCC...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTGCGATCACCCCGTTGTaGATGCTGTTCCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVAITPL*MLFQVA
Trigger: CGCCACCTGGAACAGCATCCACAACGGGGTGATCGC...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAGGCAGCCCCTTGCGCTaGAAGACGGCGATCACCCCG +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGGSPLR*KTAITP
Trigger: CGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCC...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CACCAGCAGCATCTGCACGATGGCAGGGGGCACACGGGCATGGGCCCGGGCCAGCCTTTTGTCAGCAGCTaGTTCTGCAGGTACTCCGTG +
Preference number: 4 (lower is better)
Translates to: HQQHLHDGRGHTGMGPGQPFVSS*FCRYSV
Trigger: CACGGAGTACCTGCAGAACCAGCTGCTGACAAAAGG...CTGGCCCGGGCCCATGCCCGTGTGCCCCCTGCCATCGTGCAGATGCTGCTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGACAGCTGGCGCACCGATaGCTCCTTGCCCTGCACCGG +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGQLAHR*LLALHR
Trigger: CCGGTGCAGGGCAAGGAGCCATCGGTGCGCCAGCTG...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCTGCAGCAGGGCCAGCTaGCGCACCGATGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGCSRAS*RTDGSL
Trigger: CAAGGAGCCATCGGTGCGCCAGCTGGCCCTGCTGCA...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCCCTCAGTCACGCCCCTaGACTCATGTACCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAPQSRP*THVPPA
Trigger: TGCAGGGGGTACATGAGTCCAGGGGCGTGACTGAGG...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCGCACCACAGGGTTCTTaGCCAGCACGTCCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGAPQGS*PARPPS
Trigger: GCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGC...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCTGGGGTACAGTCTGCTaGGGCAGGGCCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGWGTVC*GRALSG
Trigger: CCCACTCAGGGCCCTGCCCCAGCAGACTGTACCCCA...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTCAGGGGGCTGGGTCGTaGGGTACAGTCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIQGAGS*GTVCWG
Trigger: GCCCCAGCAGACTGTACCCCACGACCCAGCCCCCTG...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGACAGGGGGCTGGGTCGTaGGGTACAGTCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGQGAGS*GTVCWG
Trigger: GCCCCAGCAGACTGTACCCCACGACCCAGCCCCCTG...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCACAGGGGGCTGGGTCGTaGGGTACAGTCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAQGAGS*GTVCWG
Trigger: GCCCCAGCAGACTGTACCCCACGACCCAGCCCCCTG...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CGTGTTGTAGCTCTTGGAGCGCACCACAGGGTTCTTGGCCAGCACGTCCCCCGAGCAGGGAGCTGCGGGTaGGATCCAAGCCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RVVALGAHHRVLGQHVPRAGSCG*DPSPAQ
Trigger: CTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGC...TCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCGCTCCAAGAGCTACAACACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTACGGACTCCAGGATCTaGTCCACCAGGTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVTDSRI*STRFSG
Trigger: CCCGGAGAACCTGGTGGACCAGATCCTGGAGTCCGT...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCACGGACTCCAGGATCTaGTCCACCAGGTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWATDSRI*STRFSG
Trigger: CCCGGAGAACCTGGTGGACCAGATCCTGGAGTCCGT...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGCCGACCCCCGTCTCTaGCCCGGCCCCTGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWADPRL*PGPWVN
Trigger: GTTTACCCAGGGGCCGGGCCAGAGACGGGGGTCGGC...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTGATCCACAAGCCTTaGCCTCCCAAGGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWVIHKP*PPKVLG
Trigger: TCCCAGCACCTTGGGAGGCCAAGGCTTGTGGATCAC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR CCA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGGGGAAGCCCAGCTGCTaGCTGATAAATATTTTATCA +
Preference number: 4 (lower is better)
Translates to: AGGAWERAADPRLWPGPWGKPSC*LINILS
Trigger: TGATAAAATATTTATCAGCCAGCAGCTGGGCTTCCC...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS-3UTR TCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCCTCTGCGACCTTGGCTaGGGTCTGCACCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGLCDLG*GLHPPG
Trigger: CCCAGGAGGGTGCAGACCTCAGCCAAGGTCGCAGAG...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR TCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGTCTGCAGGTACTCCGTaGAGAAGGACCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLSAGTP*RRTPAL
Trigger: CAGAGCTGGGGTCCTTCTTCACGGAGTACCTGCAGA...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTCTGCAGGTACTCCGTaGAGAAGGACCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVSAGTP*RRTPAL
Trigger: CAGAGCTGGGGTCCTTCTTCACGGAGTACCTGCAGA...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGCTGGGCGAACTCATaGACTTCAACCTGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLGWANS*TSTCGE
Trigger: CTCTCCGCAGGTTGAAGTTCATGAGTTCGCCCAGCC...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336985.11
CDS-3UTR TCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGCACGCTCGAAGTCACTaGAGGGACTCTTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLHARSH*RDSCWV
Trigger: CACCCAGCAAGAGTCCCTTCAGTGACTTCGAGCGTG...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR GCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAACTAAGCACACTGGATaGCTGGCCTTGGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLTKHTG*LALGAA
Trigger: GGCTGCCCCCAAGGCCAGGCATCCAGTGTGCTTAGT...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006251.11
ENST00000624862.3
CDS-3UTR GCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCCCCACGGGTCTCCTCTaGTCTGCGACCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGPTGLL*SATLAE
Trigger: CTCAGCCAAGGTCGCAGAGCAGAGGAGACCCGTGGG...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAGGTCGGGCAGCCCCTTaGGCTGGAAGACGGCGATCA +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGGRAAP*AGRRRS
Trigger: TGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACC...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAAGCACCAGCAGCATCTaGACGATGGCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLSTSSI*TMAGGT
Trigger: TGTGCCCCCTGCCATCGTGCAGATGCTGCTGGTGCT...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCAGCACCAGCAGCATCTaGACGATGGCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTSTSSI*TMAGGT
Trigger: TGTGCCCCCTGCCATCGTGCAGATGCTGCTGGTGCT...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGACTCATGTACCCCCTaGAGCACCAGCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWADSCTP*STSSIC
Trigger: GCAGATGCTGCTGGTGCTGCAGGGGGTACATGAGTC...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCTTCTGGACCAGCGTCTCCAGGCGCAGGTAGTCCTCAGTCACGCCCCTGGACTAGTGGAGGCCGTAGGTaGCCAGGTATGGCGACACCA +
Preference number: 4 (lower is better)
Translates to: PSGPASPGAGSPQSRPWTSGGRR*PGMATP
Trigger: TGGTGTCGCCATACCTGGGCACCTACGGCCTCCACT...AGTCCAGGGGCGTGACTGAGGACTACCTGCGCCTGGAGACGCTGGTCCAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR GCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCAGTGGAGGCCGTAGGTaGCCAGGTATGGCGACACCA +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTSGGRR*PGMATP
Trigger: TGGTGTCGCCATACCTGGGCACCTACGGCCTCCACT...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTCCGCCTCGTGCTCCTaGACGGGGTTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGSASCS*TGFSRG
Trigger: GCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGGA...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTTCCGCCTCGTGCTCCTaGACGGGGTTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYISASCS*TGFSRG
Trigger: GCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGGA...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTCCGACACAGAGTGCCTaGGGATGCTGGTACCGCCGG +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIPTQSA*GCWYRR
Trigger: CCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGG...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCACCGACACAGAGTGCCTaGGGATGCTGGTACCGCCGG +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAPTQSA*GCWYRR
Trigger: CCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGG...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCATCTCCGACACAGAGTaGCTGCGGATGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAISDTE*LRMLVP
Trigger: CGGTACCAGCATCCGCAGGCACTCTGTGTCGGAGAT...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTATCTCCGACACAGAGTaGCTGCGGATGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVISDTE*LRMLVP
Trigger: CGGTACCAGCATCCGCAGGCACTCTGTGTCGGAGAT...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGTGGGATCCAAGCCCTaGTCAGGGGGCTGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAVGSKP*SGGWVV
Trigger: CACGACCCAGCCCCCTGAGCAGGGCTTGGATCCCAC...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCCCTCCAAGTCGGACATaGCAGAGCCCCGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGPPSRT*QSPGPG
Trigger: GCCGGGGCCGGGGCTCTGGCATGTCCGACTTGGAGG...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGCGCCGGGTTAATCATTaGACGGAGAGGCTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLRRVNH*TERLSV
Trigger: CACGCTGAGCCTCTCCGTGCAATGATTAACCCGGCG...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336985.11
CDS-3UTR GCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCAGGGACTCGGGGCGCTaGAGGGGAGACTCGCCTAAG +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGRDSGR*RGDSPK
Trigger: CTTAGGCGAGTCTCCCCTGCAGCGCCCCGAGTCCCT...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611394.4
ENST00000617066.4
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGACAGGGTGGGCACAGGTaGAATCCCAGCCCACGGGTC +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGQGGHR*NPSPRV
Trigger: GACCCGTGGGCTGGGATTCCACCTGTGCCCACCCTG...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR CCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGTGTTCCAGGTGGCGTTaGCGCAGGCCCGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWCSRWR*RRPGAA
Trigger: AGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACA...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGATGCTGTTCCAGGTaGCGTTGGCGCAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWGCCSR*RWRRPG
Trigger: GCCGGGCCTGCGCCAACGCCACCTGGAACAGCATCC...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAAGGCTGAAGAGCTCCTaGTCGGGCAGCCCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGRLKSS*SGSPLR
Trigger: GCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCT...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTAGGCTGAAGAGCTCCTaGTCGGGCAGCCCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIRLKSS*SGSPLR
Trigger: GCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCT...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGATGCAGCAGGGCCAGCTaGCGCACCGATGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGCSRAS*RTDGSL
Trigger: CAAGGAGCCATCGGTGCGCCAGCTGGCCCTGCTGCA...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGGCGACACCACCTTCTaGACCAGCGTCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAGDTTF*TSVSRR
Trigger: GCGCCTGGAGACGCTGGTCCAGAAGGTGGTGTCGCC...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTGTAGGTGCCCAGGTATaGCGACACCACCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVVGAQV*RHHLLD
Trigger: GTCCAGAAGGTGGTGTCGCCATACCTGGGCACCTAC...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ATTCCGGAAGTGCAGCAGGGCCAGCTGGCGCACCGATGGCTCCTTGCCCTGCACGTAGGTGCCCAGGTATaGCGACACCACCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: IPEVQQGQLAHRWLLALHVGAQV*RHHLLD
Trigger: GTCCAGAAGGTGGTGTCGCCATACCTGGGCACCTAC...GTGCAGGGCAAGGAGCCATCGGTGCGCCAGCTGGCCCTGCTGCACTTCCGGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAGCACCACAGGGTTCTTaGCCAGCACGTCCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGAPQGS*PARPPS
Trigger: GCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGC...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGCACCACAGGGTTCTTaGCCAGCACGTCCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAAPQGS*PARPPS
Trigger: GCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGC...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTGCACCACAGGGTTCTTaGCCAGCACGTCCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIAPQGS*PARPPS
Trigger: GCTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGC...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCATGGGGTACAGTCTGCTaGGGCAGGGCCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAWGTVC*GRALSG
Trigger: CCCACTCAGGGCCCTGCCCCAGCAGACTGTACCCCA...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCCCCTGCTCAGGGGGCTaGGTCGTGGGGTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGPCSGG*VVGYSL
Trigger: CAGACTGTACCCCACGACCCAGCCCCCTGAGCAGGG...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTCCCTGCTCAGGGGGCTaGGTCGTGGGGTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIPCSGG*VVGYSL
Trigger: CAGACTGTACCCCACGACCCAGCCCCCTGAGCAGGG...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCACCCTGCTCAGGGGGCTaGGTCGTGGGGTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAPCSGG*VVGYSL
Trigger: CAGACTGTACCCCACGACCCAGCCCCCTGAGCAGGG...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTGCAGGGAGCTGCGGGTaGGATCCAAGCCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIAGSCG*DPSPAQ
Trigger: CTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGC...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCCTCTGGCCCGGCCCCTaGGTAAACGCCGACTCAGAT +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGLWPGP*VNADSD
Trigger: ATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAG...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTTGGACACCAGAGGGCTaGGGCAGGAGGAGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIWTPEG*GRRSVG
Trigger: TCCCACGCTCCTCCTGCCCCAGCCCTCTGGTGTCCA...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGATGGACACCAGAGGGCTaGGGCAGGAGGAGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGWTPEG*GRRSVG
Trigger: TCCCACGCTCCTCCTGCCCCAGCCCTCTGGTGTCCA...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CTGGCCGGGCGGGTCGGAGAAGCCCTGAGGCTCGGGGCAGGACGTCATCTCCGAGGTTTACATTCTCTGTaGGCAGGTGTGGACACCAGA +
Preference number: 4 (lower is better)
Translates to: LAGRVGEALRLGAGRHLRGLHSL*AGVDTR
Trigger: TCTGGTGTCCACACCTGCCCACAGAGAATGTAAACC...TCGGAGATGACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432916.5
CDS-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCACTTTGGGGCCCGGCGTaGGCAGAGCCCACTGGGTTT +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGALWGPA*AEPTGF
Trigger: AAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAG...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGACTTTGGGGCCCGGCGTaGGCAGAGCCCACTGGGTTT +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGLWGPA*AEPTGF
Trigger: AAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAG...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCCTTTGGGGCCCGGCGTaGGCAGAGCCCACTGGGTTT +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGLWGPA*AEPTGF
Trigger: AAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAG...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGCTGGGCGAACTCATaGACTTCAACCTTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLGWANS*TSTLLG
Trigger: ACCCAGCAAGGTTGAAGTTCATGAGTTCGCCCAGCC...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006251.11
CDS-3UTR TCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCCCAGGTCTCTGCCAGTaGGTCCAGCAGCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGPGLCQ*VQQLLS
Trigger: GGACAGAAGCTGCTGGACTCACTGGCAGAGACCTGG...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAGGATGCAGGAATGGGTaGAGGGCCCCTCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGGCRNG*RAPRWS
Trigger: ACTCCAGCGAGGGGCCCTTCACCCATTCCTGCATCC...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTGGATGCAGGAATGGGTaGAGGGCCCCTCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIGCRNG*RAPRWS
Trigger: ACTCCAGCGAGGGGCCCTTCACCCATTCCTGCATCC...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAACTCAAGGCCAGCTGTaGGGCCTCACACGACACTCT +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLTQGQL*GLTRHS
Trigger: AGAGTGTCGTGTGAGGCCTCACAGCTGGCCTTGAGT...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp CGCTTTTCCAGGATGCAGGAATGGGTGAAGGGCCCCTCGCTGGAGTGGAGGCCGACTCAAGGCCAGCTGTaGGGCCTCACACGACACTCT +
Preference number: 4 (lower is better)
Translates to: RFSRMQEWVKGPSLEWRPTQGQL*GLTRHS
Trigger: AGAGTGTCGTGTGAGGCCTCACAGCTGGCCTTGAGT...CGGCCTCCACTCCAGCGAGGGGCCCTTCACCCATTCCTGCATCCTGGAAAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR TCA 90 bp GTTCTTGGCCAGCACGTCCCCCGAGCGGGAGCGGCGGAGGAGGCGCTTTTCCAGCCGAGCAAGGAAGGCTaGTGGTATTTCCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: VLGQHVPRAGAAEEALFQPSKEG*WYFQPR
Trigger: TCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGG...CTGGAAAAGCGCCTCCTCCGCCGCTCCCGCTCGGGGGACGTGCTGGCCAAGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR TCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAACTCCTGACCTCAGGTaGTCCACAAGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLTPDLR*STSLGL
Trigger: GAGGCCAAGGCTTGTGGATCACCTGAGGTCAGGAGT...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR TCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGGCTGGGCGAACTCATaGACTTCAACCTGTACAAGC +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWGWANS*TSTCTS
Trigger: GCTTGTACAGGTTGAAGTTCATGAGTTCGCCCAGCC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR TCA 90 bp AGAAGCCCTGAGGCTCGGGGCAGGACGTCATCTCCGACACAGAGTGCCTGCGGACCAGGTCTCTGCCAGTaGGTCCAGCAGCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RSPEARGRTSSPTQSACGPGLCQ*VQQLPH
Trigger: ATGAGGAAGCTGCTGGACTCACTGGCAGAGACCTGG...TCCGCAGGCACTCTGTGTCGGAGATGACGTCCTGCCCCGAGCCTCAGGGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGTCGGGCAGCCCCTTaGGCTGGAAGACGGCGATCA +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWGRAAP*AGRRRS
Trigger: TGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACC...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGCACCAGCAGCATCTaGACGATGGCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGSTSSI*TMAGGT
Trigger: TGTGCCCCCTGCCATCGTGCAGATGCTGCTGGTGCT...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAGACTCATGTACCCCCTaGAGCACCAGCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLDSCTP*STSSIC
Trigger: GCAGATGCTGCTGGTGCTGCAGGGGGTACATGAGTC...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGTGGAGGCCGTAGGTaGCCAGGTATGGCGACACCA +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGSGGRR*PGMATP
Trigger: TGGTGTCGCCATACCTGGGCACCTACGGCCTCCACT...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAATCTCCGACACAGAGTaGCTGCGGATGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLISDTE*LRMLVP
Trigger: CGGTACCAGCATCCGCAGGCACTCTGTGTCGGAGAT...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCCCTCACACGACACTCTaGCGGCCCCCAGAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGPHTTL*RPPEPS
Trigger: GGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGG...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGAGGAGGAGACAGGTGTaGTGGAGTCTGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWRRRQV*WSLVTL
Trigger: CAAAGTGACCAGACTCCAGCACACCTGTCTCCTCCT...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp TGTGAGGCCTCACACGACACTCTGCCGGCCCCCAGAGCCCTCCAAGTCGGACATGAGGAGGCGCTTTTCTaGAGCACCAGCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: CEASHDTLPAPRALQVGHEEALF*STSSIC
Trigger: GCAGATGCTGCTGGTGCTGCAGAAAAGCGCCTCCTC...ATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGCCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432916.5
CDS-3UTR GCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCCCCGACTGCACCCTATaGAGGGAAGCCCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGPDCTL*REAQLL
Trigger: CAGCAGCTGGGCTTCCCTGCATAGGGTGCAGTCGGG...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS-3UTR GCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCCAGCAGAACTCAGGCTaGAGGCTCGGGTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGQQNSG*RLGWEL
Trigger: CAGCTCCCACCCGAGCCTGCAGCCTGAGTTCTGCTG...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGGGATGCTGCCAGGGTaGGCACAGGTGGAATCCCAG +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAGMLPG*AQVESQ
Trigger: CTGGGATTCCACCTGTGCCCACCCTGGCAGCATCCC...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTGAACTTCAACCTTGCTaGGTGCCGAGAGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVELQPC*VPRGLR
Trigger: CCTGAGTCCTCTCGGCACCCAGCAAGGTTGAAGTTC...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000006251.11
CDS-3UTR CCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCGGATGCTGTTCCAGGTaGCGTTGGCGCAGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGGCCSR*RWRRPG
Trigger: GCCGGGCCTGCGCCAACGCCACCTGGAACAGCATCC...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCCAGCTGGCGCACCGATaGCTCCTTGCCCTGCACCGG +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGQLAHR*LLALHR
Trigger: CCGGTGCAGGGCAAGGAGCCATCGGTGCGCCAGCTG...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCCCTCAGTCACGCCCCTaGACTCATGTACCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGPQSRP*THVPPA
Trigger: TGCAGGGGGTACATGAGTCCAGGGGCGTGACTGAGG...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp AGGAGGCGCTTTTCCAGGATGCAGGAATGGGTGAAGGGCCCCTCGCTGGAGTGGCCTCAGTCACGCCCCTaGACTCATGTACCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: RRRFSRMQEWVKGPSLEWPQSRP*THVPPA
Trigger: TGCAGGGGGTACATGAGTCCAGGGGCGTGACTGAGG...CCACTCCAGCGAGGGGCCCTTCACCCATTCCTGCATCCTGGAAAAGCGCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR CCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCGACACCACCTTCTaGACCAGCGTCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWGDTTF*TSVSRR
Trigger: GCGCCTGGAGACGCTGGTCCAGAAGGTGGTGTCGCC...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCGTAGGTGCCCAGGTATaGCGACACCACCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTVGAQV*RHHLLD
Trigger: GTCCAGAAGGTGGTGTCGCCATACCTGGGCACCTAC...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTGCGTGTTGTAGCTCTTaGAGCGCACCACAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVACCSS*SAPQGS
Trigger: AGAACCCTGTGGTGCGCTCCAAGAGCTACAACACGC...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGCGTGTTGTAGCTCTTaGAGCGCACCACAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAACCSS*SAPQGS
Trigger: AGAACCCTGTGGTGCGCTCCAAGAGCTACAACACGC...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGCCCTGCTCAGGGGGCTaGGTCGTGGGGTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWPCSGG*VVGYSL
Trigger: CAGACTGTACCCCACGACCCAGCCCCCTGAGCAGGG...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCACGGACTCCAGGATCTaGTCCACCAGGTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGTDSRI*STRFSG
Trigger: CCCGGAGAACCTGGTGGACCAGATCCTGGAGTCCGT...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp TGTGAGGCCTCACACGACACTCTGCCGGCCCCCAGAGCCCTCCAAGTCGGACATTGCCTGAAACAGACCTaGGCCGAGCAAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: CEASHDTLPAPRALQVGHCLKQT*AEQGRL
Trigger: CAGCCTTCCTTGCTCGGCCCAGGTCTGTTTCAGGCA...ATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGCCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432916.5
CDS-3UTR CCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGTGGACACCAGAGGGCTaGGGCAGGAGGAGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWWTPEG*GRRSVG
Trigger: TCCCACGCTCCTCCTGCCCCAGCCCTCTGGTGTCCA...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTGTGGGCAGAGCCCACTaGGTTTACATTCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVVGRAH*VYILCG
Trigger: CCCACAGAGAATGTAAACCCAGTGGGCTCTGCCCAC...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGTGGGCAGAGCCCACTaGGTTTACATTCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLVGRAH*VYILCG
Trigger: CCCACAGAGAATGTAAACCCAGTGGGCTCTGCCCAC...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAAGGTGTGCTGGAGTCTaGTCACTTTGGGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGARCAGV*SLWGPA
Trigger: CGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCT...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAAGGTGTGCTGGAGTCTaGTCACTTTGGGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGRCAGV*SLWGPA
Trigger: CGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCT...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCAGGTGTGCTGGAGTCTaGTCACTTTGGGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGRCAGV*SLWGPA
Trigger: CGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCT...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTATGCAACCGCGCCTCCTaGGTTCAAGTGCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLCNRAS*VQVLLL
Trigger: GAGGAGAAGCACTTGAACCCAGGAGGCGCGGTTGCA...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR TCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCCTCTGCGACCTTGGCTaGGGTCTGCACCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGLCDLG*GLHPPG
Trigger: CCCAGGAGGGTGCAGACCTCAGCCAAGGTCGCAGAG...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR TCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCACCAGGTCTCTGCCAGTaGGTCCAGCAGCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAPGLCQ*VQQLLS
Trigger: GGACAGAAGCTGCTGGACTCACTGGCAGAGACCTGG...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCCCAGGTCTCTGCCAGTaGGTCCAGCAGCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGPGLCQ*VQQLLS
Trigger: GGACAGAAGCTGCTGGACTCACTGGCAGAGACCTGG...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCAGCACGTCACTaGAGAAGAAGTCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTWAARH*RRSPRS
Trigger: AGACCTGGGACTTCTTCTTCAGTGACGTGCTGCCCA...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGCCGAGCAAGGAAGGCTaGTGGTATTTCCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWPSKEG*WYFQPR
Trigger: TCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGG...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGCCGACTCAGATGCCTaGAACAGACCTGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWADSDA*NRPGPS
Trigger: GCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGC...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCGGTCGGGCAGCCCCTTaGGCTGGAAGACGGCGATCA +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGGRAAP*AGRRRS
Trigger: TGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACC...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGCCCGAAGGATCACCATaGCTTTTGTCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TGVLESGHFGARRGQSPLPEGSP*LLSAAG
Trigger: ACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGG...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCAGCACCAGCAGCATCTaGACGATGGCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGSTSSI*TMAGGT
Trigger: TGTGCCCCCTGCCATCGTGCAGATGCTGCTGGTGCT...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAAGTGGAGGCCGTAGGTaGCCAGGTATGGCGACACCA +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGASGGRR*PGMATP
Trigger: TGGTGTCGCCATACCTGGGCACCTACGGCCTCCACT...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTAGTGGAGGCCGTAGGTaGCCAGGTATGGCGACACCA +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYISGGRR*PGMATP
Trigger: TGGTGTCGCCATACCTGGGCACCTACGGCCTCCACT...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCTCCGCCTCGTGCTCCTaGACGGGGTTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGSASCS*TGFSRG
Trigger: GCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGGA...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCAAACGCCGACTCAGATaGCTGAAACAGACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTKRRLR*LKQTWA
Trigger: GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTT...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCAGGAGGAGACAGGTGTaGTGGAGTCTGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWARRRQV*WSLVTL
Trigger: CAAAGTGACCAGACTCCAGCACACCTGTCTCCTCCT...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAGGGACTCTTGCTGGGTaGCGAGAGGACTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGGTLAG*REDSGG
Trigger: ACCTCCTGAGTCCTCTCGGCACCCAGCAAGAGTCCC...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR CCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTAGCACACTGGATGCCTaGCCTTGGGGGCAGCCGAAT +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYISTLDA*PWGQPN
Trigger: ATTCGGCTGCCCCCAAGGCCAGGCATCCAGTGTGCT...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006251.11
ENST00000624862.3
CDS-3UTR CCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCTGCAGCAGGGCCAGCTaGCGCACCGATGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGCSRAS*RTDGSL
Trigger: CAAGGAGCCATCGGTGCGCCAGCTGGCCCTGCTGCA...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCACCTCAGTCACGCCCCTaGACTCATGTACCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAPQSRP*THVPPA
Trigger: TGCAGGGGGTACATGAGTCCAGGGGCGTGACTGAGG...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCCCTCAGTCACGCCCCTaGACTCATGTACCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGPQSRP*THVPPA
Trigger: TGCAGGGGGTACATGAGTCCAGGGGCGTGACTGAGG...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp TGTGAGGCCTCACACGACACTCTGCCGGCCCCCAGAGCCCTCCAAGTCGGACATGCGTGTTGTAGCTCTTaGAGCGCACCACAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: CEASHDTLPAPRALQVGHACCSS*SAPQGS
Trigger: AGAACCCTGTGGTGCGCTCCAAGAGCTACAACACGC...ATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGCCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCTGGGGTACAGTCTGCTaGGGCAGGGCCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGWGTVC*GRALSG
Trigger: CCCACTCAGGGCCCTGCCCCAGCAGACTGTACCCCA...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCGCAGGGAGCTGCGGGTaGGATCCAAGCCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGAGSCG*DPSPAQ
Trigger: CTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGC...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAACGGACTCCAGGATCTaGTCCACCAGGTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGTDSRI*STRFSG
Trigger: CCCGGAGAACCTGGTGGACCAGATCCTGGAGTCCGT...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCTGCCTGAAACAGACCTaGGCCGAGCAAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGCLKQT*AEQGRL
Trigger: CAGCCTTCCTTGCTCGGCCCAGGTCTGTTTCAGGCA...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCTGGACACCAGAGGGCTaGGGCAGGAGGAGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGWTPEG*GRRSVG
Trigger: TCCCACGCTCCTCCTGCCCCAGCCCTCTGGTGTCCA...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCGTGGGCAGAGCCCACTaGGTTTACATTCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTVGRAH*VYILCG
Trigger: CCCACAGAGAATGTAAACCCAGTGGGCTCTGCCCAC...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCCTTTGGGGCCCGGCGTaGGCAGAGCCCACTGGGTTT +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGLWGPA*AEPTGF
Trigger: AAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAG...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCGGAGTCTGGTCACTTTaGGGCCCGGCGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGGVWSL*GPAWAE
Trigger: CTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCC...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGAGGTGTGCTGGAGTCTaGTCACTTTGGGGCCCGGCG +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWRCAGV*SLWGPA
Trigger: CGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCT...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCACTGGATGCCTGGCCTTaGGGGCAGCCGAATGGCTTA +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGALDAWP*GQPNGL
Trigger: TAAGCCATTCGGCTGCCCCCAAGGCCAGGCATCCAG...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS-3UTR TCA 90 bp CAGCAGAGGCGTGTTGTAGCTCTTGGAGCGCACCACAGGGTTCTTGGCCAGCACTCTGCAGGTACTCCGTaGAGAAGGACCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QQRRVVALGAHHRVLGQHSAGTP*RRTPAL
Trigger: CAGAGCTGGGGTCCTTCTTCACGGAGTACCTGCAGA...GTGCTGGCCAAGAACCCTGTGGTGCGCTCCAAGAGCTACAACACGCCTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR TCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGCCAGGTCTCTGCCAGTaGGTCCAGCAGCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWPGLCQ*VQQLLS
Trigger: GGACAGAAGCTGCTGGACTCACTGGCAGAGACCTGG...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCTGGGCAGCACGTCACTaGAGAAGAAGTCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGWAARH*RRSPRS
Trigger: AGACCTGGGACTTCTTCTTCAGTGACGTGCTGCCCA...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCGGATGCAGGAATGGGTaGAGGGCCCCTCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGGCRNG*RAPRWS
Trigger: ACTCCAGCGAGGGGCCCTTCACCCATTCCTGCATCC...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTACTCAAGGCCAGCTGTaGGGCCTCACACGACACTCT +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYITQGQL*GLTRHS
Trigger: AGAGTGTCGTGTGAGGCCTCACAGCTGGCCTTGAGT...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCGCCGACTCAGATGCCTaGAACAGACCTGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGADSDA*NRPGPS
Trigger: GCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGC...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGTCACTGCGCCTGGCTaGGGCTGTGTCTTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWVTAPG*GCVFVA
Trigger: TGCCACAAAGACACAGCCTCAGCCAGGCGCAGTGAC...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR GCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCCCCGAAGGATCACCATaGCTTTTGTCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTPEGSP*LLSAAG
Trigger: ACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGG...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGACTCATGTACCCCCTaGAGCACCAGCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGADSCTP*STSSIC
Trigger: GCAGATGCTGCTGGTGCTGCAGGGGGTACATGAGTC...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTGACTCATGTACCCCCTaGAGCACCAGCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIDSCTP*STSSIC
Trigger: GCAGATGCTGCTGGTGCTGCAGGGGGTACATGAGTC...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CAGCAGAGGCGTGTTGTAGCTCTTGGAGCGCACCACAGGGTTCTTGGCCAGCACGACTCATGTACCCCCTaGAGCACCAGCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: QQRRVVALGAHHRVLGQHDSCTP*STSSIC
Trigger: GCAGATGCTGCTGGTGCTGCAGGGGGTACATGAGTC...GTGCTGGCCAAGAACCCTGTGGTGCGCTCCAAGAGCTACAACACGCCTCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR GCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGAGTGGAGGCCGTAGGTaGCCAGGTATGGCGACACCA +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWSGGRR*PGMATP
Trigger: TGGTGTCGCCATACCTGGGCACCTACGGCCTCCACT...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCATCTCCGACACAGAGTaGCTGCGGATGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGISDTE*LRMLVP
Trigger: CGGTACCAGCATCCGCAGGCACTCTGTGTCGGAGAT...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp AAAATCCCTTCAGAATCCGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCCCTCACACGACACTCTaGCGGCCCCCAGAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: KIPSESESTDSRIWSTRFPHTTL*RPPEPS
Trigger: GGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGG...GAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAGGGATTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAACAGGCATGAGTCACTaGGCCTGGCTGAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGTGMSH*AWLRLC
Trigger: ACACAGCCTCAGCCAGGCGCAGTGACTCATGCCTGT...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR CCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGCGATCACCCCGTTGTaGATGCTGTTCCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWAITPL*MLFQVA
Trigger: CGCCACCTGGAACAGCATCCACAACGGGGTGATCGC...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CCA 90 bp AATCCCTTCAGAATCCGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCTCGGCGACACCACCTTCTaGACCAGCGTCTCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: NPFRIRVHGLQDLVHQVLGDTTF*TSVSRR
Trigger: GCGCCTGGAGACGCTGGTCCAGAAGGTGGTGTCGCC...GAGAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAGGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGTAGGTGCCCAGGTATaGCGACACCACCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAVGAQV*RHHLLD
Trigger: GTCCAGAAGGTGGTGTCGCCATACCTGGGCACCTAC...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTGTAGGTGCCCAGGTATaGCGACACCACCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIVGAQV*RHHLLD
Trigger: GTCCAGAAGGTGGTGTCGCCATACCTGGGCACCTAC...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp AGGAGGCGCTTTTCCAGGATGCAGGAATGGGTGAAGGGCCCCTCGCTGGAGTGGGCGTGTTGTAGCTCTTaGAGCGCACCACAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: RRRFSRMQEWVKGPSLEWACCSS*SAPQGS
Trigger: AGAACCCTGTGGTGCGCTCCAAGAGCTACAACACGC...CCACTCCAGCGAGGGGCCCTTCACCCATTCCTGCATCCTGGAAAAGCGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCGCGTGTTGTAGCTCTTaGAGCGCACCACAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGACCSS*SAPQGS
Trigger: AGAACCCTGTGGTGCGCTCCAAGAGCTACAACACGC...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGACGGACTCCAGGATCTaGTCCACCAGGTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWTDSRI*STRFSG
Trigger: CCCGGAGAACCTGGTGGACCAGATCCTGGAGTCCGT...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGATGCCTGAAACAGACCTaGGCCGAGCAAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGCLKQT*AEQGRL
Trigger: CAGCCTTCCTTGCTCGGCCCAGGTCTGTTTCAGGCA...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCCTCTGGCCCGGCCCCTaGGTAAACGCCGACTCAGAT +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGLWPGP*VNADSD
Trigger: ATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAG...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTGGTTTACATTCTCTGTaGGCAGGTGTGGACACCAGA +
Preference number: 4 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVGLHSL*AGVDTR
Trigger: TCTGGTGTCCACACCTGCCCACAGAGAATGTAAACC...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGGTTTACATTCTCTGTaGGCAGGTGTGGACACCAGA +
Preference number: 4 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAGLHSL*AGVDTR
Trigger: TCTGGTGTCCACACCTGCCCACAGAGAATGTAAACC...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCGTGGGCAGAGCCCACTaGGTTTACATTCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGVGRAH*VYILCG
Trigger: CCCACAGAGAATGTAAACCCAGTGGGCTCTGCCCAC...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGCAGCACGTCACTaGAGAAGAAGTCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGWAARH*RRSPRS
Trigger: AGACCTGGGACTTCTTCTTCAGTGACGTGCTGCCCA...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTTGGGCAGCACGTCACTaGAGAAGAAGTCCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIWAARH*RRSPRS
Trigger: AGACCTGGGACTTCTTCTTCAGTGACGTGCTGCCCA...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGACTCAAGGCCAGCTGTaGGGCCTCACACGACACTCT +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWTQGQL*GLTRHS
Trigger: AGAGTGTCGTGTGAGGCCTCACAGCTGGCCTTGAGT...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTAGACAGAAATACAAAGTaGCCAAGGCCAGTGACGAGG +
Preference number: 4 (lower is better)
Translates to: VLESGHFGARRGQSPLGLDRNTK*PRPVTR
Trigger: CCTCGTCACTGGCCTTGGTCACTTTGTATTTCTGTC...TAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp AGAAGCCCTGAGGCTCGGGGCAGGACGTCATCTCCGACACAGAGTGCCTGCGGAGACAGAAATACAAAGTaGCCAAGGCCAGTGACGAGG +
Preference number: 4 (lower is better)
Translates to: RSPEARGRTSSPTQSACGDRNTK*PRPVTR
Trigger: CCTCGTCACTGGCCTTGGTCACTTTGTATTTCTGTC...TCCGCAGGCACTCTGTGTCGGAGATGACGTCCTGCCCCGAGCCTCAGGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR TCA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCGACAGAAATACAAAGTaGCCAAGGCCAGTGACGAGG +
Preference number: 4 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTDRNTK*PRPVTR
Trigger: CCTCGTCACTGGCCTTGGTCACTTTGTATTTCTGTC...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGCTCTATGTCTTCTaGCCAGCCTGCCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGWLYVF*PACPIR
Trigger: TCTGATGGGGCAGGCTGGTCAGAAGACATAGAGCCA...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR GCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTTTCAACCTTGCTGGGTaGCGAGAGGACTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIFNLAG*REDSGG
Trigger: ACCTCCTGAGTCCTCTCGGCACCCAGCAAGGTTGAA...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000006251.11
CDS-3UTR GCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCAGCACCAGCAGCATCTaGACGATGGCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGSTSSI*TMAGGT
Trigger: TGTGCCCCCTGCCATCGTGCAGATGCTGCTGGTGCT...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAAAACGCCGACTCAGATaGCTGAAACAGACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGKRRLR*LKQTWA
Trigger: GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTT...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGATGTCTTTGTGGCAGTTaGCCCCCAGTGTTACTGGGC +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGCLCGS*PPVLLG
Trigger: GCCCAGTAACACTGGGGGGCAACTGCCACAAAGACA...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR GCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCTTGCCCAGGCTGGAGTaGAATGGGGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGLPRLE*NGAISA
Trigger: AGCCGAGATCGCCCCATTGCACTCCAGCCTGGGCAA...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCCCTTTTGTCAGCAGCTaGTTCTGCAGGTACTCCGTG +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGPFVSS*FCRYSV
Trigger: CACGGAGTACCTGCAGAACCAGCTGCTGACAAAAGG...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp AAAATCCCTTCAGAATCCGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCTGCAGCAGGGCCAGCTaGCGCACCGATGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: KIPSESESTDSRIWSTRFCSRAS*RTDGSL
Trigger: CAAGGAGCCATCGGTGCGCCAGCTGGCCCTGCTGCA...GAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAGGGATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp AATCCCTTCAGAATCCGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCTCGCAGCATCTGCACGATaGCAGGGGGCACACGGGCAT +
Preference number: 4 (lower is better)
Translates to: NPFRIRVHGLQDLVHQVLAASAR*QGAHGH
Trigger: ATGCCCGTGTGCCCCCTGCCATCGTGCAGATGCTGC...GAGAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAGGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGTAGGTGCCCAGGTATaGCGACACCACCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWVGAQV*RHHLLD
Trigger: GTCCAGAAGGTGGTGTCGCCATACCTGGGCACCTAC...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCGCGTGTTGTAGCTCTTaGAGCGCACCACAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGACCSS*SAPQGS
Trigger: AGAACCCTGTGGTGCGCTCCAAGAGCTACAACACGC...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCACGGACTCCAGGATCTaGTCCACCAGGTTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGTDSRI*STRFSG
Trigger: CCCGGAGAACCTGGTGGACCAGATCCTGGAGTCCGT...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGTGCCTGAAACAGACCTaGGCCGAGCAAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWCLKQT*AEQGRL
Trigger: CAGCCTTCCTTGCTCGGCCCAGGTCTGTTTCAGGCA...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCGTGGGCAGAGCCCACTaGGTTTACATTCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGVGRAH*VYILCG
Trigger: CCCACAGAGAATGTAAACCCAGTGGGCTCTGCCCAC...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCGGGGTTTCTCCATGTTaGTCCGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGGVSPC*SGWSQT
Trigger: AGTTTGAGACCAGCCGGACCAACATGGAGAAACCCC...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR TCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCACTCAAGGCCAGCTGTaGGGCCTCACACGACACTCT +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGTQGQL*GLTRHS
Trigger: AGAGTGTCGTGTGAGGCCTCACAGCTGGCCTTGAGT...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTCCCGAAGGATCACCATaGCTTTTGTCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIPEGSP*LLSAAG
Trigger: ACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGG...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCACCCGAAGGATCACCATaGCTTTTGTCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAPEGSP*LLSAAG
Trigger: ACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGG...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGACCCGAAGGATCACCATaGCTTTTGTCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGPEGSP*LLSAAG
Trigger: ACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGG...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCGACTCATGTACCCCCTaGAGCACCAGCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGDSCTP*STSSIC
Trigger: GCAGATGCTGCTGGTGCTGCAGGGGGTACATGAGTC...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAAGGAGGAGACAGGTGTaGTGGAGTCTGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGRRRQV*WSLVTL
Trigger: CAAAGTGACCAGACTCCAGCACACCTGTCTCCTCCT...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTCCTTTTGTCAGCAGCTaGTTCTGCAGGTACTCCGTG +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIPFVSS*FCRYSV
Trigger: CACGGAGTACCTGCAGAACCAGCTGCTGACAAAAGG...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCCCTTTTGTCAGCAGCTaGTTCTGCAGGTACTCCGTG +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGPFVSS*FCRYSV
Trigger: CACGGAGTACCTGCAGAACCAGCTGCTGACAAAAGG...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCACCTTTTGTCAGCAGCTaGTTCTGCAGGTACTCCGTG +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAPFVSS*FCRYSV
Trigger: CACGGAGTACCTGCAGAACCAGCTGCTGACAAAAGG...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGCGTGTTGTAGCTCTTaGAGCGCACCACAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWACCSS*SAPQGS
Trigger: AGAACCCTGTGGTGCGCTCCAAGAGCTACAACACGC...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCTGCCTGAAACAGACCTaGGCCGAGCAAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGCLKQT*AEQGRL
Trigger: CAGCCTTCCTTGCTCGGCCCAGGTCTGTTTCAGGCA...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTGACAGAAATACAAAGTaGCCAAGGCCAGTGACGAGG +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIDRNTK*PRPVTR
Trigger: CCTCGTCACTGGCCTTGGTCACTTTGTATTTCTGTC...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGACAGAAATACAAAGTaGCCAAGGCCAGTGACGAGG +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGADRNTK*PRPVTR
Trigger: CCTCGTCACTGGCCTTGGTCACTTTGTATTTCTGTC...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCGACAGAAATACAAAGTaGCCAAGGCCAGTGACGAGG +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGDRNTK*PRPVTR
Trigger: CCTCGTCACTGGCCTTGGTCACTTTGTATTTCTGTC...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTCCGAGCAAGGAAGGCTaGTGGTATTTCCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIPSKEG*WYFQPR
Trigger: TCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGG...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGCTGGTCTCAAACTCCTaGCCTCAGGTGATCCACAAG +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWLVSNS*PQVIHK
Trigger: CTTGTGGATCACCTGAGGTCAGGAGTTTGAGACCAG...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR GCA 90 bp AAAATCCCTTCAGAATCCGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCAGCACCAGCAGCATCTaGACGATGGCAGGGGGCACA +
Preference number: 4 (lower is better)
Translates to: KIPSESESTDSRIWSTRFSTSSI*TMAGGT
Trigger: TGTGCCCCCTGCCATCGTGCAGATGCTGCTGGTGCT...GAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAGGGATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAACCTCACACGACACTCTaGCGGCCCCCAGAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQPHTTL*RPPEPS
Trigger: GGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGG...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGAGGAGGAGACAGGTGTaGTGGAGTCTGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWRRRQV*WSLVTL
Trigger: CAAAGTGACCAGACTCCAGCACACCTGTCTCCTCCT...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCGGTTTACATTCTCTGTaGGCAGGTGTGGACACCAGA +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGGLHSL*AGVDTR
Trigger: TCTGGTGTCCACACCTGCCCACAGAGAATGTAAACC...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGGTTTACATTCTCTGTaGGCAGGTGTGGACACCAGA +
Preference number: 4 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAGLHSL*AGVDTR
Trigger: TCTGGTGTCCACACCTGCCCACAGAGAATGTAAACC...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAGGTTTACATTCTCTGTaGGCAGGTGTGGACACCAGA +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGGLHSL*AGVDTR
Trigger: TCTGGTGTCCACACCTGCCCACAGAGAATGTAAACC...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGCCAGGCTTCCCTCTGTaGAAGTTCCAAACACACCAT +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWPGFPL*KFQTHH
Trigger: ATGGTGTGTTTGGAACTTTCACAGAGGGAAGCCTGG...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR GCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCCCCGAAGGATCACCATaGCTTTTGTCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGPEGSP*LLSAAG
Trigger: ACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGG...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAATCCGCCTCGTGCTCCTaGACGGGGTTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQSASCS*TGFSRG
Trigger: GCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGGA...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp AAAATCCCTTCAGAATCCGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCATCTCCGACACAGAGTaGCTGCGGATGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: KIPSESESTDSRIWSTRFISDTE*LRMLVP
Trigger: CGGTACCAGCATCCGCAGGCACTCTGTGTCGGAGAT...GAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAGGGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAAGTGGGATCCAAGCCCTaGTCAGGGGGCTGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQVGSKP*SGGWVV
Trigger: CACGACCCAGCCCCCTGAGCAGGGCTTGGATCCCAC...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTTACTGGGCTCTCAATaGACGCTCGAAGTCACTGAA +
Preference number: 4 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGLLGSQ*TLEVTE
Trigger: TTCAGTGACTTCGAGCGTGCATTGAGAGCCCAGTAA...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR CCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAAAGGCTGAAGAGCTCCTaGTCGGGCAGCCCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQRLKSS*SGSPLR
Trigger: GCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCT...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAATGGGGTACAGTCTGCTaGGGCAGGGCCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQWGTVC*GRALSG
Trigger: CCCACTCAGGGCCCTGCCCCAGCAGACTGTACCCCA...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAACCCTGCTCAGGGGGCTaGGTCGTGGGGTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQPCSGG*VVGYSL
Trigger: CAGACTGTACCCCACGACCCAGCCCCCTGAGCAGGG...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAAGCAGGGAGCTGCGGGTaGGATCCAAGCCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQAGSCG*DPSPAQ
Trigger: CTGAGCAGGGCTTGGATCCCACCCGCAGCTCCCTGC...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGTTTACATTCTCTGTaGGCAGGTGTGGACACCAGA +
Preference number: 4 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWGLHSL*AGVDTR
Trigger: TCTGGTGTCCACACCTGCCCACAGAGAATGTAAACC...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR GCA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAGCAGGGAAGCCCAGCTaGTGGCTGATAAATATTTTA +
Preference number: 4 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGAGKPS*WLINIL
Trigger: TAAAATATTTATCAGCCAGCAGCTGGGCTTCCCTGC...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS-3UTR CCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAAGCAGCATCTGCACGATaGCAGGGGGCACACGGGCAT +
Preference number: 4 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQAASAR*QGAHGH
Trigger: ATGCCCGTGTGCCCCCTGCCATCGTGCAGATGCTGC...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCCCAGAGCGGGGAGGCTaGGTCTTACTATTATTGTTA +
Preference number: 4 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGPERGG*VLLLLL
Trigger: TAACAATAATAGTAAGACTCAGCCTCCCCGCTCTGG...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR GCA 90 bp AAAATCCCTTCAGAATCCGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCCCCGAAGGATCACCATaGCTTTTGTCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KIPSESESTDSRIWSTRFPEGSP*LLSAAG
Trigger: ACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGG...GAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAGGGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAAGCGATCACCCCGTTGTaGATGCTGTTCCAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQAITPL*MLFQVA
Trigger: CGCCACCTGGAACAGCATCCACAACGGGGTGATCGC...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR TCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAATCTGCAGGTACTCCGTaGAGAAGGACCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQSAGTP*RRTPAL
Trigger: CAGAGCTGGGGTCCTTCTTCACGGAGTACCTGCAGA...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAAACTCAAGGCCAGCTGTaGGGCCTCACACGACACTCT +
Preference number: 4 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQTQGQL*GLTRHS
Trigger: AGAGTGTCGTGTGAGGCCTCACAGCTGGCCTTGAGT...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR TCA 90 bp AAAATCCCTTCAGAATCCGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCCCGAGCAAGGAAGGCTaGTGGTATTTCCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: KIPSESESTDSRIWSTRFPSKEG*WYFQPR
Trigger: TCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGG...GAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAGGGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR GCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAAATCTCCGACACAGAGTaGCTGCGGATGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQISDTE*LRMLVP
Trigger: CGGTACCAGCATCCGCAGGCACTCTGTGTCGGAGAT...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CCA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAAGTTGTGGATGCTTGCTaGGTGCCGAGAGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQVVDAC*VPRGLR
Trigger: CCTGAGTCCTCTCGGCACCCAGCAAGCATCCACAAC...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS GCA 90 bp GATCACCCCGTTGTGGATGCTCGGTCCCCGCGCCGCCGCCGCCGCTaGCACCGCGCAGAGCCAGAGCCGGAGCCGGAGCCGGAGCCCGGG +
Preference number: 5 (lower is better)
Translates to: DHPVVDARSPRRRRR*HRAEPEPEPEPEPG
Trigger: CCCGGGCTCCGGCTCCGGCTCCGGCTCTGGCTCTGCGCGGTGGCAGCGGCGGCGGCGGCGCGGGGACCGAGCATCCACAACGGGGTGATC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617066.4
CDS-3UTR CAA 90 bp AGGTCCCGGTGGGGCCCTGGCCGGGCGGGTCGGAGAAGCCCTGAGGCTCGGGGCCTGTTCCAGGTGGCGTaGGCGCAGGCCCGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: RSRWGPGRAGRRSPEARGLFQVA*AQARRC
Trigger: GCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAG...GCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAGGGCCCCACCGGGACCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS GCA 90 bp ATGAACTTCAACCTGCGGAGAGTCCTCATGGTGACCCGGGCCGCCTaGGCCGCGCCCACGCGCGCCCCACGCCGCGCCCTGCGCCACGCC +
Preference number: 5 (lower is better)
Translates to: MNFNLRRVLMVTRAA*AAPTRAPRRALRHA
Trigger: GGCGTGGCGCAGGGCGCGGCGTGGGGCGCGCGTGGGCGCGGCGCAGGCGGCCCGGGTCACCATGAGGACTCTCCGCAGGTTGAAGTTCAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336985.11
ENST00000403696.5
ENST00000431834.5
CDS GCA 90 bp CGAACTCATGAACTTCAACCTCGGTCCCCGCGCCGCCGCCGCCGCTaGCACCGCGCAGAGCCAGAGCCGGAGCCGGAGCCGGAGCCCGGG +
Preference number: 5 (lower is better)
Translates to: RTHELQPRSPRRRRR*HRAEPEPEPEPEPG
Trigger: CCCGGGCTCCGGCTCCGGCTCCGGCTCTGGCTCTGCGCGGTGGCAGCGGCGGCGGCGGCGCGGGGACCGAGGTTGAAGTTCATGAGTTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432186.5
ENST00000611394.4
CDS-3UTR CAA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGTGGTCGGGCAGCCCCTaGCGCTGGAAGACGGCGATC +
Preference number: 5 (lower is better)
Translates to: AGGAWERAADPRLWPGPWWSGSP*RWKTAI
Trigger: GATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCA...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS GCA 90 bp TTGTGGATGCTGTTCCAGGTGGCGTTGGCGCAGGCCCGGCGCTGCTaGGTGCCCCGCTCGTCCGCGGCGGCGGCCGGCTCTCTCTTGCCC +
Preference number: 5 (lower is better)
Translates to: LWMLFQVALAQARRC*VPRSSAAAAGSLLP
Trigger: GGGCAAGAGAGAGCCGGCCGCCGCCGCGGACGAGCGGGGCACGCAGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAGCATCCACAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000403696.5
ENST00000431834.5
ENST00000432186.5
ENST00000432916.5
ENST00000457960.5
ENST00000459857.5
ENST00000477331.5
ENST00000492289.5
ENST00000611394.4
CDS CCA 90 bp GCCGGCCGCCCCGCCGGGTTAATCATTGCACGGAGAGGCTCAGCGTaGAGCGCCAGGCGCGCGGCCAGCACAGACCCGGCGCAAACGGAG +
Preference number: 5 (lower is better)
Translates to: AGRPAGLIIARRGSA*SARRAASTDPAQTE
Trigger: CTCCGTTTGCGCCGGGTCTGTGCTGGCCGCGCGCCTGGCGCTCCACGCTGAGCCTCTCCGTGCAATGATTAACCCGGCGGGGCGGCCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336985.11
CDS-3UTR CAA 90 bp GCAGGAGGAGCGTGGGAGCGAGCGGCCGACCCCCGTCTCTGGCCCGGCCCCTGGACGGCGATCACCCCGTaGTGGATGCTTGCTGGGTGC +
Preference number: 5 (lower is better)
Translates to: AGGAWERAADPRLWPGPWTAITP*WMLAGC
Trigger: GCACCCAGCAAGCATCCACAACGGGGTGATCGCCGT...CCAGGGGCCGGGCCAGAGACGGGGGTCGGCCGCTCGCTCCCACGCTCCTCCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS-3UTR CAA 90 bp CCGCCGCGCCCTCCGCCTCGTGCTCCTGCACGGGGTTCAGCAGAGGCGTGTTGTTGGTCGGGCAGCCCCTaGCGCTGGAAGACGGCGATC +
Preference number: 5 (lower is better)
Translates to: PPRPPPRAPARGSAEACCWSGSP*RWKTAI
Trigger: GATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCA...ACAACACGCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGCGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS GCA 90 bp GCAGGCGGCTCACTGGGCTCCCCCATGACTCAGCAGAACTCAGGCTaGAGGCTCGGGTGGGAGCTGCCCCCGACTGCACCCTATGCAGGG +
Preference number: 5 (lower is better)
Translates to: AGGSLGSPMTQQNSG*RLGWELPPTAPYAG
Trigger: CCCTGCATAGGGTGCAGTCGGGGGCAGCTCCCACCCGAGCCTGCAGCCTGAGTTCTGCTGAGTCATGGGGGAGCCCAGTGAGCCGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS-3UTR CAA 90 bp CAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGCGGCCGGCTCTCTCTaGCCCAGGTCACTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: QVCWSLVTLGPGVGRAHWAAGSL*PRSLRL
Trigger: CAGCCTCAGTGACCTGGGCAAGAGAGAGCCGGCCGC...CCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CAA 90 bp GACGTCATCTCCGACACAGAGTGCCTGCGGATGCTGGTACCGCCGGCCGCCGCGTGCCGGACGCCCTCGTaGAGGCTGAAGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: DVISDTECLRMLVPPAAACRTPS*RLKSSW
Trigger: CCAGGAGCTCTTCAGCCTCAACGAGGGCGTCCGGCA...CGCGGCGGCCGGCGGTACCAGCATCCGCAGGCACTCTGTGTCGGAGATGACGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS GCA 90 bp CTGCCAGGGTGGGCACAGGTGGAATCCCAGCCCACGGGTCTCCTCTaGTCTGCGACCTTGGCTGAGGTCTGCACCCTCCTGGGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LPGWAQVESQPTGLL*SATLAEVCTLLGVS
Trigger: GCTCACCCCCAGGAGGGTGCAGACCTCAGCCAAGGTCGCAGAGCAGAGGAGACCCGTGGGCTGGGATTCCACCTGTGCCCACCCTGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000459857.5
ENST00000492475.5
ENST00000624862.3
CDS CCA 90 bp CTGGGCTCCCCCATGACTCAGCAGAACTCAGGCTGCAGGCTCGGGTaGGAGCTGCCCCCGACTGCACCCTATGCAGGGAAGCCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LGSPMTQQNSGCRLG*ELPPTAPYAGKPSC
Trigger: GCAGCTGGGCTTCCCTGCATAGGGTGCAGTCGGGGGCAGCTCCCACCCGAGCCTGCAGCCTGAGTTCTGCTGAGTCATGGGGGAGCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS-3UTR CAA 90 bp TGGCCAGCACGTCCCCCGAGCGGGAGCGGCGGAGGAGGCGCTTTTCCAGGATGCACGGCGATCACCCCGTaGTGGATGCTGTTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: WPARPPSGSGGGGAFPGCTAITP*WMLFQV
Trigger: CACCTGGAACAGCATCCACAACGGGGTGATCGCCGT...GCATCCTGGAAAAGCGCCTCCTCCGCCGCTCCCGCTCGGGGGACGTGCTGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR CAA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGTGGTCGGGCAGCCCCTaGCGCTGGAAGACGGCGATC +
Preference number: 5 (lower is better)
Translates to: TGVLESGHFGARRGQSPLWSGSP*RWKTAI
Trigger: GATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCA...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp CGCGCCCTCCGCCTCGTGCTCCTGCACGGGGTTCAGCAGAGGCGTGTTGTAGCTTGCCGGACGCCCTCGTaGAGGCTGAAGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RALRLVLLHGVQQRRVVACRTPS*RLKSSW
Trigger: CCAGGAGCTCTTCAGCCTCAACGAGGGCGTCCGGCA...AGCTACAACACGCCTCTGCTGAACCCCGTGCAGGAGCACGAGGCGGAGGGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CAA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCCGCACCACAGGGTTCTaGGCCAGCACGTCCCCCGAG +
Preference number: 5 (lower is better)
Translates to: LARPLGKRRLRCLKQTWARTTGF*ASTSPE
Trigger: CTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCG...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp GTGAGGCCTCACACGACACTCTGCCGGCCCCCAGAGCCCTCCAAGTCGGACATGCGCACCACAGGGTTCTaGGCCAGCACGTCCCCCGAG +
Preference number: 5 (lower is better)
Translates to: VRPHTTLCRPPEPSKSDMRTTGF*ASTSPE
Trigger: CTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCG...CATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGCCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CAA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGCGCACCACAGGGTTCTaGGCCAGCACGTCCCCCGAG +
Preference number: 5 (lower is better)
Translates to: TGVLESGHFGARRGQSPLRTTGF*ASTSPE
Trigger: CTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCG...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS TCA 90 bp GCAGGGCCCACGGTGGCCTCCCAGCCCCTCTCAGAGCATGTGGCCTaGGTCACTCTGCTGCTCACAGCAGCGTCGGGATCTGGGAGACCA +
Preference number: 5 (lower is better)
Translates to: AGPTVASQPLSEHVA*VTLLLTAASGSGRP
Trigger: TGGTCTCCCAGATCCCGACGCTGCTGTGAGCAGCAGAGTGACTCAGGCCACATGCTCTGAGAGGGGCTGGGAGGCCACCGTGGGCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS GCA 90 bp TGGGCATGGGGGCCATCACCACTGGGCCTGACTGGCGCGGGCAGATaGCTCCACTCACCCAGGATGGGTCATCAGAGGATGCGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: WAWGPSPLGLTGAGR*LHSPRMGHQRMREW
Trigger: CCACTCCCGCATCCTCTGATGACCCATCCTGGGTGAGTGGAGGCATCTGCCCGCGCCAGTCAGGCCCAGTGGTGATGGCCCCCATGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495017.5
CDS CCA 90 bp CCCAGGTCTCTGCCAGTGAGTCCAGCAGCTTCTGTCCTGTGGGCATaGGGGCCATCACCACTGGGCCTGACTGGCGCGGGCAGATGCCCT +
Preference number: 5 (lower is better)
Translates to: PRSLPVSPAASVLWA*GPSPLGLTGAGRCP
Trigger: AGGGCATCTGCCCGCGCCAGTCAGGCCCAGTGGTGATGGCCCCCATGCCCACAGGACAGAAGCTGCTGGACTCACTGGCAGAGACCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403696.5
CDS CCA 90 bp CCCAGGTCTCTGCCAGTGAGTCCAGCAGCTTCTGTCCTGTGGGCATaGGGGCCATCACCACTGGGCCTGACTGGCGCGGGCAGATGCCTC +
Preference number: 5 (lower is better)
Translates to: PRSLPVSPAASVLWA*GPSPLGLTGAGRCL
Trigger: GAGGCATCTGCCCGCGCCAGTCAGGCCCAGTGGTGATGGCCCCCATGCCCACAGGACAGAAGCTGCTGGACTCACTGGCAGAGACCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495017.5
CDS-3UTR CAA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCACTGTTCCAGGTGGCGTaGGCGCAGGCCCGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGALFQVA*AQARRC
Trigger: GCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAG...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CAA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTCTGTTCCAGGTGGCGTaGGCGCAGGCCCGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYILFQVA*AQARRC
Trigger: GCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAG...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CAA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGTCGGGCAGCCCCTaGCGCTGGAAGACGGCGATC +
Preference number: 5 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTWSGSP*RWKTAI
Trigger: GATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCA...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTGCCGGACGCCCTCGTaGAGGCTGAAGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVCRTPS*RLKSSW
Trigger: CCAGGAGCTCTTCAGCCTCAACGAGGGCGTCCGGCA...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp GTGAGGCCTCACACGACACTCTGCCGGCCCCCAGAGCCCTCCAAGTCGGACATGTGGAGTCTGGTCACTTaGGGGCCCGGCGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: VRPHTTLCRPPEPSKSDMWSLVT*GPGVGR
Trigger: TCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA...CATGTCCGACTTGGAGGGCTCTGGGGGCCGGCAGAGTGTCGTGTGAGGCCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432916.5
CDS-3UTR CAA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTGGAGTCTGGTCACTTaGGGGCCCGGCGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVWSLVT*GPGVGR
Trigger: TCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS TCA 90 bp CAGCAGCTTCTGTCCTGTGGGCATGGGGGCCATCACCACTGGGCCTaGCTGGCGCGGGCAGATGCCTCCACTCACCCAGGATGGGTCATC +
Preference number: 5 (lower is better)
Translates to: QQLLSCGHGGHHHWA*LARADASTHPGWVI
Trigger: GATGACCCATCCTGGGTGAGTGGAGGCATCTGCCCGCGCCAGTCAGGCCCAGTGGTGATGGCCCCCATGCCCACAGGACAGAAGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495017.5
CDS CCA 90 bp CCCTCGTTGAGGCTGAAGAGCTCCTGGTCGGGCAGCCCCTTGCGCTaGAAGACGGCGATCACCCCGTTGTGGATGCTGTTCCAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: PSLRLKSSWSGSPLR*KTAITPLWMLFQVA
Trigger: CGCCACCTGGAACAGCATCCACAACGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCTCAACGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000403696.5
ENST00000431834.5
ENST00000432186.5
ENST00000432916.5
ENST00000457960.5
ENST00000459857.5
ENST00000477331.5
ENST00000492289.5
ENST00000611394.4
CDS CCA 90 bp TGTCAGCAGCTGGTTCGGACGCCCTCGTTGAGGCTGAAGAGCTCCTaGTCGGGCAGCCCCTTGCGCTGGAAGACGGCGATCACCCCGTTG +
Preference number: 5 (lower is better)
Translates to: CQQLVRTPSLRLKSS*SGSPLRWKTAITPL
Trigger: CAACGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCTCAACGAGGGCGTCCGAACCAGCTGCTGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477331.5
CDS CCA 90 bp CCCTCGTTGAGGCTGAAGAGCTCCTGGTCGGGCAGCCCCTTGCGCTaGAAGACGGCGATCACCCCGTTGTGGATGCTTGCTGGGTGCCGA +
Preference number: 5 (lower is better)
Translates to: PSLRLKSSWSGSPLR*KTAITPLWMLAGCR
Trigger: TCGGCACCCAGCAAGCATCCACAACGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCTCAACGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492475.5
ENST00000624862.3
CDS CCA 90 bp GCCCAGAGGACCCAGGGCCAGGCCAGCTCTGCCTGTGGTCAGGTCTaGGGATCCACGGAGACCCCTTCCAATAGCAGCACCACGTCGAAG +
Preference number: 5 (lower is better)
Translates to: AQRTQGQASSACGQV*GSTETPSNSSTTSK
Trigger: CTTCGACGTGGTGCTGCTATTGGAAGGGGTCTCCGTGGATCCCCAGACCTGACCACAGGCAGAGCTGGCCTGGCCCTGGGTCCTCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492289.5
CDS-3UTR CAA 90 bp GTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTCTCTGCTCTGCGACCTaGGCTGAGGTCTGCACCCTC +
Preference number: 5 (lower is better)
Translates to: VCWSLVTLGPGVGRAHWVLCSAT*AEVCTL
Trigger: GAGGGTGCAGACCTCAGCCAAGGTCGCAGAGCAGAG...AACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR CAA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGCTGTTCCAGGTGGCGTaGGCGCAGGCCCGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWLFQVA*AQARRC
Trigger: GCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAG...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CAA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCTGGTCGGGCAGCCCCTaGCGCTGGAAGACGGCGATC +
Preference number: 5 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGWSGSP*RWKTAI
Trigger: GATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCA...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp GGCCCTGGCCGGGCGGGTCGGAGAAGCCCTGAGGCTCGGGGCAGGACGTCATCTGGATCACCATGCCTTTaGTCAGCAGCTGGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: GPGRAGRRSPEARGRTSSGSPCL*SAAGSA
Trigger: TGCAGAACCAGCTGCTGACAAAAGGCATGGTGATCC...AGATGACGTCCTGCCCCGAGCCTCAGGGCTTCTCCGACCCGCCCGGCCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CAA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCCGCACCACAGGGTTCTaGGCCAGCACGTCCCCCGAG +
Preference number: 5 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGRTTGF*ASTSPE
Trigger: CTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCG...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS CCA 90 bp AGCTTCTGTCCTGTGGGCATGGGGGCCATCACCACTGGGCCTGACTaGCGCGGGCAGATGCCTCCACTCACCCAGGATGGGTCATCAGAG +
Preference number: 5 (lower is better)
Translates to: SFCPVGMGAITTGPD*RGQMPPLTQDGSSE
Trigger: CTCTGATGACCCATCCTGGGTGAGTGGAGGCATCTGCCCGCGCCAGTCAGGCCCAGTGGTGATGGCCCCCATGCCCACAGGACAGAAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495017.5
CDS-3UTR CAA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCGCGGCCGGCTCTCTCTaGCCCAGGTCACTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGAAGSL*PRSLRL
Trigger: CAGCCTCAGTGACCTGGGCAAGAGAGAGCCGGCCGC...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CAA 90 bp CCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGAGCAAGGAGCGGCCGGCTCTCTCTaGCCCAGGTCACTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: PLGKRRLRCLKQTWAEQGAAGSL*PRSLRL
Trigger: CAGCCTCAGTGACCTGGGCAAGAGAGAGCCGGCCGC...TCCTTGCTCGGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CAA 90 bp ACAGGTGTGCTGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGACGGCGATCACCCCGTaGTGGATGCTGTTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: TGVLESGHFGARRGQSPLTAITP*WMLFQV
Trigger: CACCTGGAACAGCATCCACAACGGGGTGATCGCCGT...CAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCAGCACACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CAA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTTGGTCGGGCAGCCCCTaGCGCTGGAAGACGGCGATC +
Preference number: 5 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIWSGSP*RWKTAI
Trigger: GATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCA...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp GTATGGCGACACCACCTTCTGGACCAGCGTCTCCAGGCGCAGGTAGTCCTCAGTTGGTCGGGCAGCCCCTaGCGCTGGAAGACGGCGATC +
Preference number: 5 (lower is better)
Translates to: VWRHHLLDQRLQAQVVLSWSGSP*RWKTAI
Trigger: GATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCA...ACTGAGGACTACCTGCGCCTGGAGACGCTGGTCCAGAAGGTGGTGTCGCCATAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431834.5
CDS-3UTR CAA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGTCGGGCAGCCCCTaGCGCTGGAAGACGGCGATC +
Preference number: 5 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGWSGSP*RWKTAI
Trigger: GATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCA...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCTGCCGGACGCCCTCGTaGAGGCTGAAGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGCRTPS*RLKSSW
Trigger: CCAGGAGCTCTTCAGCCTCAACGAGGGCGTCCGGCA...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCCGCACCACAGGGTTCTaGGCCAGCACGTCCCCCGAG +
Preference number: 5 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGRTTGF*ASTSPE
Trigger: CTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCG...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp CTTCAGAATCCGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCTCCGGGCCGCACCACAGGGTTCTaGGCCAGCACGTCCCCCGAG +
Preference number: 5 (lower is better)
Translates to: LQNPSPRTPGSGPPGSPGRTTGF*ASTSPE
Trigger: CTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCG...GCCCGGAGAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCGGATTCTGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CAA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTCGCACCACAGGGTTCTaGGCCAGCACGTCCCCCGAG +
Preference number: 5 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIRTTGF*ASTSPE
Trigger: CTCGGGGGACGTGCTGGCCAAGAACCCTGTGGTGCG...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCTGGAGTCTGGTCACTTaGGGGCCCGGCGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGWSLVT*GPGVGR
Trigger: TCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAACGGCGATCACCCCGTaGTGGATGCTCGGTCCCCGC +
Preference number: 5 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGATAITP*WMLGPR
Trigger: GCGGGGACCGAGCATCCACAACGGGGTGATCGCCGT...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000617066.4
CDS GCA 90 bp TCCCAGCCCACGGGTCTCCTCTGCTCTGCGACCTTGGCTGAGGTCTaGACCCTCCTGGGGGTGAGCTCTGAAACCCTGCTCAGCACTAAG +
Preference number: 5 (lower is better)
Translates to: SQPTGLLCSATLAEV*TLLGVSSETLLSTK
Trigger: CTTAGTGCTGAGCAGGGTTTCAGAGCTCACCCCCAGGAGGGTGCAGACCTCAGCCAAGGTCGCAGAGCAGAGGAGACCCGTGGGCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000459857.5
ENST00000492475.5
ENST00000624862.3
CDS-3UTR CAA 90 bp GCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCCTCTGCTCTGCGACCTaGGCTGAGGTCTGCACCCTC +
Preference number: 5 (lower is better)
Translates to: AHWVYILCGQVWTPEGWGLCSAT*AEVCTL
Trigger: GAGGGTGCAGACCTCAGCCAAGGTCGCAGAGCAGAG...GCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000624862.3
CDS-3UTR CAA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGCCGGACGCCCTCGTaGAGGCTGAAGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGCRTPS*RLKSSW
Trigger: CCAGGAGCTCTTCAGCCTCAACGAGGGCGTCCGGCA...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS TCA 90 bp TTGAGCCAAGGCCCGGGAGATGAGGCTGCTCACCCAGCTGTGCGCTaGGCTGGGACAAAAGCTCTGGGACCTCAGCACCCAGCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: LSQGPGDEAAHPAVR*AGTKALGPQHPAKR
Trigger: CCTCTTTGCTGGGTGCTGAGGTCCCAGAGCTTTTGTCCCAGCTCAGCGCACAGCTGGGTGAGCAGCCTCATCTCCCGGGCCTTGGCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS TCA 90 bp CTCATCCGGAGCTCTGAAGGGCTCACCGCTACCTCCAGGTGTATTTaGGCCAAGGCCCGGGAGATGAGGCTGCTCACCCAGCTGTGCGCT +
Preference number: 5 (lower is better)
Translates to: LIRSSEGLTATSRCI*AKAREMRLLTQLCA
Trigger: AGCGCACAGCTGGGTGAGCAGCCTCATCTCCCGGGCCTTGGCTCAAATACACCTGGAGGTAGCGGTGAGCCCTTCAGAGCTCCGGATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS CCA 90 bp CGTCGGGATCTGGGAGACCATGGTGTGCCCTGGAAAAAGGCCCTGTaGCCAGATGAGATGGGTGTTCTGCACCTTCCACCCCTCGGAGGG +
Preference number: 5 (lower is better)
Translates to: RRDLGDHGVPWKKAL*PDEMGVLHLPPLGG
Trigger: CCCTCCGAGGGGTGGAAGGTGCAGAACACCCATCTCATCTGGCCACAGGGCCTTTTTCCAGGGCACACCATGGTCTCCCAGATCCCGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS-3UTR CAA 90 bp CGAGTCCACGGACTCCAGGATCTGGTCCACCAGGTTCTCCGGGCTGGAGCGGGGGGATCACCATGCCTTTaGTCAGCAGCTGGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: RVHGLQDLVHQVLRAGAGGSPCL*SAAGSA
Trigger: TGCAGAACCAGCTGCTGACAAAAGGCATGGTGATCC...CCCCGCTCCAGCCCGGAGAACCTGGTGGACCAGATCCTGGAGTCCGTGGACTCG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS-3UTR CAA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGTGGAGTCTGGTCACTTaGGGGCCCGGCGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWWSLVT*GPGVGR
Trigger: TCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCACTGGATGCCTGGCCTaGGGGGCAGCCGAATGGCTT +
Preference number: 5 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGTGCLA*GAAEWL
Trigger: AAGCCATTCGGCTGCCCCCAAGGCCAGGCATCCAGT...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS TCA 90 bp GGCTCACCGCTACCTCCAGGTGTATTTGAGCCAAGGCCCGGGAGATaGGGCTGCTCACCCAGCTGTGCGCTGAGCTGGGACAAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: GSPLPPGVFEPRPGR*GCSPSCALSWDKSS
Trigger: AGAGCTTTTGTCCCAGCTCAGCGCACAGCTGGGTGAGCAGCCTCATCTCCCGGGCCTTGGCTCAAATACACCTGGAGGTAGCGGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS CCA 90 bp GCATGTGGCCTGAGTCACTCTGCTGCTCACAGCAGCGTCGGGATCTaGGAGACCATGGTGTGCCCTGGAAAAAGGCCCTGTGGCCAGATG +
Preference number: 5 (lower is better)
Translates to: ACGLSHSAAHSSVGI*ETMVCPGKRPCGQM
Trigger: CATCTGGCCACAGGGCCTTTTTCCAGGGCACACCATGGTCTCCCAGATCCCGACGCTGCTGTGAGCAGCAGAGTGACTCAGGCCACATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS-3UTR CAA 90 bp GGCAGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCACGGCGATCACCCCGTaGTGGATGCTGTTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: GRAHWVYILCGQVWTPEGTAITP*WMLFQV
Trigger: CACCTGGAACAGCATCCACAACGGGGTGATCGCCGT...GCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CAA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTACGGCGATCACCCCGTaGTGGATGCTGTTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYITAITP*WMLFQV
Trigger: CACCTGGAACAGCATCCACAACGGGGTGATCGCCGT...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CAA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCTGCCGGACGCCCTCGTaGAGGCTGAAGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGCRTPS*RLKSSW
Trigger: CCAGGAGCTCTTCAGCCTCAACGAGGGCGTCCGGCA...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp CTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCTGGGCCGGATCACCATGCCTTTaGTCAGCAGCTGGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: LARPLGKRRLRCLKQTWAGSPCL*SAAGSA
Trigger: TGCAGAACCAGCTGCTGACAAAAGGCATGGTGATCC...GGCCCAGGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCTGGAGTCTGGTCACTTaGGGGCCCGGCGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGWSLVT*GPGVGR
Trigger: TCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS TCA 90 bp CCTGCACCGGGTAGAAGATGGCCTGCAGCATGGGCAGCACGTCACTaGAGAAGAAGTCCCAGGTCTCTGCCAGTGAGTCCAGCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: PAPGRRWPAAWAARH*RRSPRSLPVSPAAS
Trigger: GGAAGCTGCTGGACTCACTGGCAGAGACCTGGGACTTCTTCTTCAGTGACGTGCTGCCCATGCTGCAGGCCATCTTCTACCCGGTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431834.5
ENST00000432916.5
CDS TCA 90 bp TTCCCATCACTGGCTCACGCCATCATCTCCCCTCATCCGGAGCTCTaGAGGGCTCACCGCTACCTCCAGGTGTATTTGAGCCAAGGCCCG +
Preference number: 5 (lower is better)
Translates to: FPSLAHAIISPHPEL*RAHRYLQVYLSQGP
Trigger: CGGGCCTTGGCTCAAATACACCTGGAGGTAGCGGTGAGCCCTTCAGAGCTCCGGATGAGGGGAGATGATGGCGTGAGCCAGTGATGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS GCA 90 bp CACTCTGCTGCTCACAGCAGCGTCGGGATCTGGGAGACCATGGTGTaGCCTGGAAAAAGGCCCTGTGGCCAGATGAGATGGGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: HSAAHSSVGIWETMV*PGKRPCGQMRWVFC
Trigger: GCAGAACACCCATCTCATCTGGCCACAGGGCCTTTTTCCAGGGCACACCATGGTCTCCCAGATCCCGACGCTGCTGTGAGCAGCAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS-3UTR CAA 90 bp CCGTCTCTGGCCCGGCCCCTGGGTAAACGCCGACTCAGATGCCTGAAACAGACCGGATCACCATGCCTTTaGTCAGCAGCTGGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: PSLARPLGKRRLRCLKQTGSPCL*SAAGSA
Trigger: TGCAGAACCAGCTGCTGACAAAAGGCATGGTGATCC...GGTCTGTTTCAGGCATCTGAGTCGGCGTTTACCCAGGGGCCGGGCCAGAGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS TCA 90 bp CCTGCACCGGGTAGAAGATGGCCTGCAGCATGGGCAGCACGTCACTaGAGAAGAAGTCCCAGGTCTCTGCCAGTGAGTCCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: PAPGRRWPAAWAARH*RRSPRSLPVSPAAS
Trigger: AGAAGCTGCTGGACTCACTGGCAGAGACCTGGGACTTCTTCTTCAGTGACGTGCTGCCCATGCTGCAGGCCATCTTCTACCCGGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000403696.5
ENST00000432186.5
ENST00000455389.3
ENST00000457960.5
ENST00000477331.5
ENST00000492475.5
ENST00000495017.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS GCA 90 bp CTCAGGCTGCAGGCTCGGGTGGGAGCTGCCCCCGACTGCACCCTATaGAGGGAAGCCCAGCTGCTGGCTGATAAATATTTTATCACTGCT +
Preference number: 5 (lower is better)
Translates to: LRLQARVGAAPDCTL*REAQLLADKYFITA
Trigger: AGCAGTGATAAAATATTTATCAGCCAGCAGCTGGGCTTCCCTGCATAGGGTGCAGTCGGGGGCAGCTCCCACCCGAGCCTGCAGCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS GCA 90 bp TCAGCAGAACTCAGGCTGCAGGCTCGGGTGGGAGCTGCCCCCGACTaGACCCTATGCAGGGAAGCCCAGCTGCTGGCTGATAAATATTTT +
Preference number: 5 (lower is better)
Translates to: SAELRLQARVGAAPD*TLCREAQLLADKYF
Trigger: AAAATATTTATCAGCCAGCAGCTGGGCTTCCCTGCATAGGGTGCAGTCGGGGGCAGCTCCCACCCGAGCCTGCAGCCTGAGTTCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS CCA 90 bp TGCTGCTCACAGCAGCGTCGGGATCTGGGAGACCATGGTGTGCCCTaGAAAAAGGCCCTGTGGCCAGATGAGATGGGTGTTCTGCACCTT +
Preference number: 5 (lower is better)
Translates to: CCSQQRRDLGDHGVP*KKALWPDEMGVLHL
Trigger: AAGGTGCAGAACACCCATCTCATCTGGCCACAGGGCCTTTTTCCAGGGCACACCATGGTCTCCCAGATCCCGACGCTGCTGTGAGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS-3UTR CAA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCACGGCGATCACCCCGTaGTGGATGCTGTTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGTAITP*WMLFQV
Trigger: CACCTGGAACAGCATCCACAACGGGGTGATCGCCGT...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
CDS-3UTR CAA 90 bp TGGAGTCTGGTCACTTTGGGGCCCGGCGTGGGCAGAGCCCACTGGGTTTACATTTGGGGTTTCTCCATGTaGGTCCGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: WSLVTLGPGVGRAHWVYIWGFSM*VRLVSN
Trigger: GTTTGAGACCAGCCGGACCAACATGGAGAAACCCCA...AATGTAAACCCAGTGGGCTCTGCCCACGCCGGGCCCCAAAGTGACCAGACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS-3UTR CAA 90 bp CCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGCAGGATCACCATGCCTTTaGTCAGCAGCTGGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: PTGFTFSVGRCGHQRAGAGSPCL*SAAGSA
Trigger: TGCAGAACCAGCTGCTGACAAAAGGCATGGTGATCC...TGCCCCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS TCA 90 bp AGCCTAAGGCACAGGGAACTTGGCTCAGGGTCTGCTCCTGGCAGATaGCAGCTGCCAATTCCCAGGCCTTTGTCACATACCAGACCCACA +
Preference number: 5 (lower is better)
Translates to: SLRHRELGSGSAPGR*QLPIPRPLSHTRPT
Trigger: TGTGGGTCTGGTATGTGACAAAGGCCTGGGAATTGGCAGCTGTCATCTGCCAGGAGCAGACCCTGAGCCAAGTTCCCTGTGCCTTAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495017.5
CDS-3UTR CAA 90 bp AGAGCCCACTGGGTTTACATTCTCTGTGGGCAGGTGTGGACACCAGAGGGCTGGGGATCACCATGCCTTTaGTCAGCAGCTGGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: RAHWVYILCGQVWTPEGWGSPCL*SAAGSA
Trigger: TGCAGAACCAGCTGCTGACAAAAGGCATGGTGATCC...CCAGCCCTCTGGTGTCCACACCTGCCCACAGAGAATGTAAACCCAGTGGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS-3UTR CAA 90 bp ACACGCCACATGGACACCCCCGCACACAGGGACGTGTCAGTAAAAACTCAAGGCGGATCACCATGCCTTTaGTCAGCAGCTGGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: TRHMDTPAHRDVSVKTQGGSPCL*SAAGSA
Trigger: TGCAGAACCAGCTGCTGACAAAAGGCATGGTGATCC...GCCTTGAGTTTTTACTGACACGTCCCTGTGTGCGGGGGTGTCCATGTGGCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000431834.5
ENST00000432916.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS GCA 90 bp GTGCAGGCCCCTCATAGAAGCGAATCTTGTCCCGAAGGATCACCATaGCTTTTGTCAGCAGCTGGTTCTACCTGCAGGTACTCCGTGAAG +
Preference number: 5 (lower is better)
Translates to: VQAPHRSESCPEGSP*LLSAAGSTCRYSVK
Trigger: CTTCACGGAGTACCTGCAGGTAGAACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGGACAAGATTCGCTTCTATGAGGGGCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459857.5
CDS GCA 90 bp GCTTCTGTCCCTCATAGAAGCGAATCTTGTCCCGAAGGATCACCATaGCTTTTGTCAGCAGCTGGTTCGGACGCCCTCGTTGAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: ASVPHRSESCPEGSP*LLSAAGSDALVEAE
Trigger: TTCAGCCTCAACGAGGGCGTCCGAACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGGACAAGATTCGCTTCTATGAGGGACAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477331.5
CDS-3UTR CAA 90 bp ACCTGGGCCGAGCAAGGAAGGCTGATGGTATTTCCAACCAAGACAGAAATACAAGGTGATCCACAAGCCTaGGCCTCCCAAGGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TWAEQGRLMVFPTKTEIQGDPQA*ASQGAG
Trigger: CCCAGCACCTTGGGAGGCCAAGGCTTGTGGATCACC...TTGTATTTCTGTCTTGGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS TCA 90 bp ATAAAATGTGGCAGTAAAGGGATTGGCCTCCCAGAGCTGAGGGCATaGAATGAGCCTAAGGCACAGGGAACTTGGCTCAGGGTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: IKCGSKGIGLPELRA*NEPKAQGTWLRVCS
Trigger: GGAGCAGACCCTGAGCCAAGTTCCCTGTGCCTTAGGCTCATTTCATGCCCTCAGCTCTGGGAGGCCAATCCCTTTACTGCCACATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495017.5
CDS GCA 72 bp CTGTTCCAGGTGGCGTTGGCGCAGGCCCGGCGCTGCTaGGTGCCCCGCTCGTCCGCGGCGGCGGCCGGCTCT +
Preference number: 6 (lower is better)
Translates to: LFQVALAQARRC*VPRSSAAAAGS
Trigger: AGAGCCGGCCGCCGCCGCGGACGAGCGGGGCACGCAGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000403696.5
ENST00000431834.5
ENST00000432186.5
ENST00000432916.5
ENST00000457960.5
ENST00000459857.5
ENST00000477331.5
ENST00000492289.5
ENST00000611394.4
CDS GCA 72 bp AACCTGCGGAGAGTCCTCATGGTGACCCGGGCCGCCTaGGCCGCGCCCACGCGCGCCCCACGCCGCGCCCTG +
Preference number: 6 (lower is better)
Translates to: NLRRVLMVTRAA*AAPTRAPRRAL
Trigger: CAGGGCGCGGCGTGGGGCGCGCGTGGGCGCGGCGCAGGCGGCCCGGGTCACCATGAGGACTCTCCGCAGGTT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336985.11
ENST00000403696.5
ENST00000431834.5
CDS GCA 72 bp CTGCGCCACGCCGCACCAAGGGCCCCGGGCCGGCGATaGGCCCTCTACGCGGAAACTCCGGCGAGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: LRHAAPRAPGRR*ALYAETPARAG
Trigger: TCCTGCTCTCGCCGGAGTTTCCGCGTAGAGGGCGCATCGCCGGCCCGGGGCCCTTGGTGCGGCGTGGCGCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336985.11
ENST00000403696.5
ENST00000431834.5
CDS GCA 72 bp CCTTGCGCTGGAAGACGGCGATCACCCCGTTGTGGATaGTCGGTCCCCGCGCCGCCGCCGCCGCTGCCACCG +
Preference number: 6 (lower is better)
Translates to: PCAGRRRSPRCG*SVPAPPPPLPP
Trigger: CGGTGGCAGCGGCGGCGGCGGCGCGGGGACCGAGCATCCACAACGGGGTGATCGCCGTCTTCCAGCGCAAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617066.4
CDS CCA 72 bp CGATCACCCCGTTGTGGATGCTGTTCCAGGTGGCGTTaGCGCAGGCCCGGCGCTGCTGCGTGCCCCGCTCGT +
Preference number: 6 (lower is better)
Translates to: RSPRCGCCSRWR*RRPGAAACPAR
Trigger: ACGAGCGGGGCACGCAGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAGCATCCACAACGGGGTGATCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000403696.5
ENST00000431834.5
ENST00000432186.5
ENST00000432916.5
ENST00000457960.5
ENST00000459857.5
ENST00000477331.5
ENST00000492289.5
ENST00000611394.4
CDS CAA 72 bp GTGCCCCGCTCGTCCGCGGCGGCGGCCGGCTCTCTCTaGCCCAGGTCACTGAGGCTGGGCGAACTCATGAAC +
Preference number: 6 (lower is better)
Translates to: VPRSSAAAAGSL*PRSLRLGELMN
Trigger: GTTCATGAGTTCGCCCAGCCTCAGTGACCTGGGCAAGAGAGAGCCGGCCGCCGCCGCGGACGAGCGGGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000403696.5
ENST00000431834.5
ENST00000432186.5
ENST00000432916.5
ENST00000457960.5
ENST00000459857.5
ENST00000492289.5
ENST00000611394.4
CDS CAA 90 bp CGCTGCTGCGTGCCCCGCTCGTCCGCGGCGGCGGCCGGCTCTCTCTaGCCCAGGTCACTGAGGCTGGGCGAACTCATGAACTTCAACCTG +
Preference number: 6 (lower is better)
Translates to: RCCVPRSSAAAAGSL*PRSLRLGELMNFNL
Trigger: CAGGTTGAAGTTCATGAGTTCGCCCAGCCTCAGTGACCTGGGCAAGAGAGAGCCGGCCGCCGCCGCGGACGAGCGGGGCACGCAGCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336985.11
ENST00000403581.5
ENST00000403696.5
ENST00000431834.5
ENST00000432916.5
CDS CAA 90 bp CGCTGCTGCGTGCCCCGCTCGTCCGCGGCGGCGGCCGGCTCTCTCTaGCCCAGGTCACTGAGGCTGGGCGAACTCATGAACTTCAACCTC +
Preference number: 6 (lower is better)
Translates to: RCCVPRSSAAAAGSL*PRSLRLGELMNFNL
Trigger: GAGGTTGAAGTTCATGAGTTCGCCCAGCCTCAGTGACCTGGGCAAGAGAGAGCCGGCCGCCGCCGCGGACGAGCGGGGCACGCAGCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432186.5
ENST00000611394.4
CDS CCA 72 bp CCTGTGGGCATGGGGGCCATCACCACTGGGCCTGACTaGCGCGGGCAGATGCCTCCACTCACCCAGGATGGG +
Preference number: 6 (lower is better)
Translates to: PVGMGAITTGPD*RGQMPPLTQDG
Trigger: CCCATCCTGGGTGAGTGGAGGCATCTGCCCGCGCCAGTCAGGCCCAGTGGTGATGGCCCCCATGCCCACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495017.5
CDS CAA 90 bp CGCTGCTGCGTGCCCCGCTCGTCCGCGGCGGCGGCCGGCTCTCTCTaGCCCAGGTCACTGAGGCTGGGCGAACTCATGAACTTCAACCTT +
Preference number: 6 (lower is better)
Translates to: RCCVPRSSAAAAGSL*PRSLRLGELMNFNL
Trigger: AAGGTTGAAGTTCATGAGTTCGCCCAGCCTCAGTGACCTGGGCAAGAGAGAGCCGGCCGCCGCCGCGGACGAGCGGGGCACGCAGCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006251.11
ENST00000459857.5
ENST00000492289.5
CDS CAA 90 bp CGCTGCTGCGTGCCCCGCTCGTCCGCGGCGGCGGCCGGCTCTCTCTaGCCCAGGTCACTGAGGCTGGGCGAACTCATGAACTTCAACCAA +
Preference number: 6 (lower is better)
Translates to: RCCVPRSSAAAAGSL*PRSLRLGELMNFNQ
Trigger: TTGGTTGAAGTTCATGAGTTCGCCCAGCCTCAGTGACCTGGGCAAGAGAGAGCCGGCCGCCGCCGCGGACGAGCGGGGCACGCAGCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457960.5
CDS CAA 90 bp CGGACGCCCTCGTTGAGGCTGAAGAGCTCCTGGTCGGGCAGCCCCTaGCGCTGGAAGACGGCGATCACCCCGTTGTGGATGCTCGGTCCC +
Preference number: 6 (lower is better)
Translates to: RTPSLRLKSSWSGSP*RWKTAITPLWMLGP
Trigger: GGGACCGAGCATCCACAACGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCTCAACGAGGGCGTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617066.4
CDS TCA 72 bp CTGTCCTGTGGGCATGGGGGCCATCACCACTGGGCCTaGCTGGCGCGGGCAGATGCCTCCACTCACCCAGGA +
Preference number: 6 (lower is better)
Translates to: LSCGHGGHHHWA*LARADASTHPG
Trigger: TCCTGGGTGAGTGGAGGCATCTGCCCGCGCCAGTCAGGCCCAGTGGTGATGGCCCCCATGCCCACAGGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495017.5
CDS GCA 72 bp CTCAGGCTGCAGGCTCGGGTGGGAGCTGCCCCCGACTaGACCCTATGCAGGGAAGCCCAGCTGCTGGCTGAT +
Preference number: 6 (lower is better)
Translates to: LRLQARVGAAPD*TLCREAQLLAD
Trigger: ATCAGCCAGCAGCTGGGCTTCCCTGCATAGGGTGCAGTCGGGGGCAGCTCCCACCCGAGCCTGCAGCCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS GCA 72 bp TCACTGGGCTCCCCCATGACTCAGCAGAACTCAGGCTaGAGGCTCGGGTGGGAGCTGCCCCCGACTGCACCC +
Preference number: 6 (lower is better)
Translates to: SLGSPMTQQNSG*RLGWELPPTAP
Trigger: GGGTGCAGTCGGGGGCAGCTCCCACCCGAGCCTGCAGCCTGAGTTCTGCTGAGTCATGGGGGAGCCCAGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS CCA 72 bp GAGGGCCAAGCTGCTCACCTGGGGCTCCCTGCCCCATaGGGCCAGGTGCAGTCCACATCCATCAGGGACCAC +
Preference number: 6 (lower is better)
Translates to: EGQAAHLGLPAP*GQVQSTSIRDH
Trigger: GTGGTCCCTGATGGATGTGGACTGCACCTGGCCCCATGGGGCAGGGAGCCCCAGGTGAGCAGCTTGGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS CAA 90 bp CGGACGCCCTCGTTGAGGCTGAAGAGCTCCTGGTCGGGCAGCCCCTaGCGCTGGAAGACGGCGATCACCCCGTTGTGGATGCTTGCTGGG +
Preference number: 6 (lower is better)
Translates to: RTPSLRLKSSWSGSP*RWKTAITPLWMLAG
Trigger: CCCAGCAAGCATCCACAACGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCTCAACGAGGGCGTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492475.5
ENST00000624862.3
CDS GCA 72 bp CTCAGCAGAACTCAGGCTGCAGGCTCGGGTGGGAGCTaGCCCCGACTGCACCCTATGCAGGGAAGCCCAGCT +
Preference number: 6 (lower is better)
Translates to: LSRTQAAGSGGS*PRLHPMQGSPA
Trigger: AGCTGGGCTTCCCTGCATAGGGTGCAGTCGGGGGCAGCTCCCACCCGAGCCTGCAGCCTGAGTTCTGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS CCA 72 bp CTGGTTCGGACGCCCTCGTTGAGGCTGAAGAGCTCCTaGTCGGGCAGCCCCTTGCGCTGGAAGACGGCGATC +
Preference number: 6 (lower is better)
Translates to: LVRTPSLRLKSS*SGSPLRWKTAI
Trigger: GATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCTCAACGAGGGCGTCCGAACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477331.5
CDS CAA 90 bp CGGACGCCCTCGTTGAGGCTGAAGAGCTCCTGGTCGGGCAGCCCCTaGCGCTGGAAGACGGCGATCACCCCGTTGTGGATGCTGTTCCAG +
Preference number: 6 (lower is better)
Translates to: RTPSLRLKSSWSGSP*RWKTAITPLWMLFQ
Trigger: CTGGAACAGCATCCACAACGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCTCAACGAGGGCGTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000403696.5
ENST00000431834.5
ENST00000432186.5
ENST00000432916.5
ENST00000457960.5
ENST00000459857.5
ENST00000477331.5
ENST00000492289.5
ENST00000611394.4
CDS GCA 72 bp TGGGCACAGGTGGAATCCCAGCCCACGGGTCTCCTCTaGTCTGCGACCTTGGCTGAGGTCTGCACCCTCCTG +
Preference number: 6 (lower is better)
Translates to: WAQVESQPTGLL*SATLAEVCTLL
Trigger: CAGGAGGGTGCAGACCTCAGCCAAGGTCGCAGAGCAGAGGAGACCCGTGGGCTGGGATTCCACCTGTGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000006251.11
ENST00000403581.5
ENST00000459857.5
ENST00000492475.5
ENST00000624862.3
CDS GCA 72 bp ACTCATGAACTTCAACCAAGGGCCCCGGGCCGGCGATaGGCCCTCTACGCGGAAACTCCGGCGAGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: THELQPRAPGRR*ALYAETPARAG
Trigger: TCCTGCTCTCGCCGGAGTTTCCGCGTAGAGGGCGCATCGCCGGCCCGGGGCCCTTGGTTGAAGTTCATGAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457960.5
CDS GCA 72 bp GGGCCATCACCACTGGGCCTGACTGGCGCGGGCAGATaGCTCCACTCACCCAGGATGGGTCATCAGAGGATG +
Preference number: 6 (lower is better)
Translates to: GPSPLGLTGAGR*LHSPRMGHQRM
Trigger: CATCCTCTGATGACCCATCCTGGGTGAGTGGAGGCATCTGCCCGCGCCAGTCAGGCCCAGTGGTGATGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495017.5
CDS CCA 72 bp AGGCTGAAGAGCTCCTGGTCGGGCAGCCCCTTGCGCTaGAAGACGGCGATCACCCCGTTGTGGATGCTCGGT +
Preference number: 6 (lower is better)
Translates to: RLKSSWSGSPLR*KTAITPLWMLG
Trigger: ACCGAGCATCCACAACGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617066.4
CDS CCA 72 bp CCCATGACTCAGCAGAACTCAGGCTGCAGGCTCGGGTaGGAGCTGCCCCCGACTGCACCCTATGCAGGGAAG +
Preference number: 6 (lower is better)
Translates to: PMTQQNSGCRLG*ELPPTAPYAGK
Trigger: CTTCCCTGCATAGGGTGCAGTCGGGGGCAGCTCCCACCCGAGCCTGCAGCCTGAGTTCTGCTGAGTCATGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS TCA 72 bp CTGTCCTGTGGGCATGGGGGCCATCACCACTGGGCCTaGCTGGCGCGGGCAGATGCCCTCATAGAAGCGAAT +
Preference number: 6 (lower is better)
Translates to: LSCGHGGHHHWA*LARADALIEAN
Trigger: ATTCGCTTCTATGAGGGCATCTGCCCGCGCCAGTCAGGCCCAGTGGTGATGGCCCCCATGCCCACAGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403696.5
CDS CCA 72 bp AGGCTGAAGAGCTCCTGGTCGGGCAGCCCCTTGCGCTaGAAGACGGCGATCACCCCGTTGTGGATGCTGTTC +
Preference number: 6 (lower is better)
Translates to: RLKSSWSGSPLR*KTAITPLWMLF
Trigger: GAACAGCATCCACAACGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000403696.5
ENST00000431834.5
ENST00000432186.5
ENST00000432916.5
ENST00000457960.5
ENST00000459857.5
ENST00000477331.5
ENST00000492289.5
ENST00000611394.4
CDS CCA 72 bp AGGCTGAAGAGCTCCTGGTCGGGCAGCCCCTTGCGCTaGAAGACGGCGATCACCCCGTTGTGGATGCTTGCT +
Preference number: 6 (lower is better)
Translates to: RLKSSWSGSPLR*KTAITPLWMLA
Trigger: AGCAAGCATCCACAACGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492475.5
ENST00000624862.3
CDS CAA 72 bp TCGTTGAGGCTGAAGAGCTCCTGGTCGGGCAGCCCCTaGCGCTGGAAGACGGCGATCACCCCGTTGTGGATG +
Preference number: 6 (lower is better)
Translates to: SLRLKSSWSGSP*RWKTAITPLWM
Trigger: CATCCACAACGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCAGCCTCAACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000403696.5
ENST00000431834.5
ENST00000432186.5
ENST00000432916.5
ENST00000457960.5
ENST00000459857.5
ENST00000477331.5
ENST00000492289.5
ENST00000492475.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS TCA 72 bp CTACCTCCAGGTGTATTTGAGCCAAGGCCCGGGAGATaGGGCTGCTCACCCAGCTGTGCGCTGAGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: LPPGVFEPRPGR*GCSPSCALSWD
Trigger: GTCCCAGCTCAGCGCACAGCTGGGTGAGCAGCCTCATCTCCCGGGCCTTGGCTCAAATACACCTGGAGGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS TCA 72 bp AGCTCTGAAGGGCTCACCGCTACCTCCAGGTGTATTTaGGCCAAGGCCCGGGAGATGAGGCTGCTCACCCAG +
Preference number: 6 (lower is better)
Translates to: SSEGLTATSRCI*AKAREMRLLTQ
Trigger: CTGGGTGAGCAGCCTCATCTCCCGGGCCTTGGCTCAAATACACCTGGAGGTAGCGGTGAGCCCTTCAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS TCA 72 bp CCATGGTGTGCCCTGGAAAAAGGCCCTGTGGCCAGATaGGATGGGTGTTCTGCACCTTCCACCCCTCGGAGG +
Preference number: 6 (lower is better)
Translates to: PWCALEKGPVAR*DGCSAPSTPRR
Trigger: CCTCCGAGGGGTGGAAGGTGCAGAACACCCATCTCATCTGGCCACAGGGCCTTTTTCCAGGGCACACCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS GCA 72 bp CACTGCGCCTGGCTGAGGCTGTGTCTTTGTGGCAGTTaGCCCCCAGTGTTACTGGGCTCTCAATGCACGCTC +
Preference number: 6 (lower is better)
Translates to: HCAWLRLCLCGS*PPVLLGSQCTL
Trigger: GAGCGTGCATTGAGAGCCCAGTAACACTGGGGGGCAACTGCCACAAAGACACAGCCTCAGCCAGGCGCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS GCA 72 bp GCTCACAGCAGCGTCGGGATCTGGGAGACCATGGTGTaGCCTGGAAAAAGGCCCTGTGGCCAGATGAGATGG +
Preference number: 6 (lower is better)
Translates to: AHSSVGIWETMV*PGKRPCGQMRW
Trigger: CCATCTCATCTGGCCACAGGGCCTTTTTCCAGGGCACACCATGGTCTCCCAGATCCCGACGCTGCTGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS GCA 72 bp AGCCCCTCTCAGAGCATGTGGCCTGAGTCACTCTGCTaGTCACAGCAGCGTCGGGATCTGGGAGACCATGGT +
Preference number: 6 (lower is better)
Translates to: SPSQSMWPESLC*SQQRRDLGDHG
Trigger: ACCATGGTCTCCCAGATCCCGACGCTGCTGTGAGCAGCAGAGTGACTCAGGCCACATGCTCTGAGAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS TCA 72 bp CTGGCTCACGCCATCATCTCCCCTCATCCGGAGCTCTaGAGGGCTCACCGCTACCTCCAGGTGTATTTGAGC +
Preference number: 6 (lower is better)
Translates to: LAHAIISPHPEL*RAHRYLQVYLS
Trigger: GCTCAAATACACCTGGAGGTAGCGGTGAGCCCTTCAGAGCTCCGGATGAGGGGAGATGATGGCGTGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS GCA 72 bp GAACTCATGAACTTCAACCTGTACAAGCCCTCAGGCTaGGCCGGCATCTTTTCCGGGCTTCCCGAGCCCCAG +
Preference number: 6 (lower is better)
Translates to: ELMNFNLYKPSG*AGIFSGLPEPQ
Trigger: CTGGGGCTCGGGAAGCCCGGAAAAGATGCCGGCGCAGCCTGAGGGCTTGTACAGGTTGAAGTTCATGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS GCA 72 bp CAGGCTCGGGTGGGAGCTGCCCCCGACTGCACCCTATaGAGGGAAGCCCAGCTGCTGGCTGATAAATATTTT +
Preference number: 6 (lower is better)
Translates to: QARVGAAPDCTL*REAQLLADKYF
Trigger: AAAATATTTATCAGCCAGCAGCTGGGCTTCCCTGCATAGGGTGCAGTCGGGGGCAGCTCCCACCCGAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624862.3
CDS CCA 72 bp CTGAGTCACTCTGCTGCTCACAGCAGCGTCGGGATCTaGGAGACCATGGTGTGCCCTGGAAAAAGGCCCTGT +
Preference number: 6 (lower is better)
Translates to: LSHSAAHSSVGI*ETMVCPGKRPC
Trigger: ACAGGGCCTTTTTCCAGGGCACACCATGGTCTCCCAGATCCCGACGCTGCTGTGAGCAGCAGAGTGACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475850.1
CDS CCA 72 bp CCCTGCTCAGCACTAAGCACACTGGATGCCTGGCCTTaGGGGCAGCCGAATGGCTTACACATTAGGAGGCGT +
Preference number: 6 (lower is better)
Translates to: PCSALSTLDAWP*GQPNGLHIRRR
Trigger: ACGCCTCCTAATGTGTAAGCCATTCGGCTGCCCCCAAGGCCAGGCATCCAGTGTGCTTAGTGCTGAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492475.5
ENST00000624862.3
CDS TCA 72 bp GGTAGAAGATGGCCTGCAGCATGGGCAGCACGTCACTaGAGAAGAAGTCCCAGGTCTCTGCCAGTGAGTCCA +
Preference number: 6 (lower is better)
Translates to: GRRWPAAWAARH*RRSPRSLPVSP
Trigger: TGGACTCACTGGCAGAGACCTGGGACTTCTTCTTCAGTGACGTGCTGCCCATGCTGCAGGCCATCTTCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000403696.5
ENST00000431834.5
ENST00000432186.5
ENST00000432916.5
ENST00000455389.3
ENST00000457960.5
ENST00000477331.5
ENST00000492475.5
ENST00000495017.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS TCA 72 bp AGTGTTACTGGGCTCTCAATGCACGCTCGAAGTCACTaGAGGGACTCTTGCTGGGTGCCGAGAGGACTCAGG +
Preference number: 6 (lower is better)
Translates to: SVTGLSMHARSH*RDSCWVPRGLR
Trigger: CCTGAGTCCTCTCGGCACCCAGCAAGAGTCCCTTCAGTGACTTCGAGCGTGCATTGAGAGCCCAGTAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS TCA 72 bp CACAGGGAACTTGGCTCAGGGTCTGCTCCTGGCAGATaGCAGCTGCCAATTCCCAGGCCTTTGTCACATACC +
Preference number: 6 (lower is better)
Translates to: HRELGSGSAPGR*QLPIPRPLSHT
Trigger: GGTATGTGACAAAGGCCTGGGAATTGGCAGCTGTCATCTGCCAGGAGCAGACCCTGAGCCAAGTTCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495017.5
CDS CCA 72 bp CCCAAACAGCTGCCCATCCATCACATGACAGGGAAGTaGGACACTGAGCAGGATCATAAGGGCAGTAGCCAG +
Preference number: 6 (lower is better)
Translates to: PKQLPIHHMTGK*DTEQDHKGSSQ
Trigger: CTGGCTACTGCCCTTATGATCCTGCTCAGTGTCCCACTTCCCTGTCATGTGATGGATGGGCAGCTGTTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455389.3
ENST00000495017.5
CDS CAA 72 bp AGAAGCGAATCTTGTCCCGAAGGATCACCATGCCTTTaGTCAGCAGCTGGTTCGGACGCCCTCGTTGAGGCT +
Preference number: 6 (lower is better)
Translates to: RSESCPEGSPCL*SAAGSDALVEA
Trigger: AGCCTCAACGAGGGCGTCCGAACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGGACAAGATTCGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477331.5
CDS TCA 72 bp TTTTGTCAGCAGCTGGTTCTACCTGCAGGTACTCCGTaGAGAAGGACCCCAGCTCTGTCTTCAACAGCTGCC +
Preference number: 6 (lower is better)
Translates to: FCQQLVLPAGTP*RRTPALSSTAA
Trigger: GGCAGCTGTTGAAGACAGAGCTGGGGTCCTTCTTCACGGAGTACCTGCAGGTAGAACCAGCTGCTGACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459857.5
CDS GCA 72 bp CCTCATAGAAGCGAATCTTGTCCCGAAGGATCACCATaGCTTTTGTCAGCAGCTGGTTCGGACGCCCTCGTT +
Preference number: 6 (lower is better)
Translates to: PHRSESCPEGSP*LLSAAGSDALV
Trigger: AACGAGGGCGTCCGAACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGGACAAGATTCGCTTCTATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477331.5
CDS TCA 72 bp GTGAAAGTTCCAAACACACCATGGCTCTATGTCTTCTaGCCAGCCTGCCCCATCAGACTGAGTGTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: VKVPNTPWLYVF*PACPIRLSVPE
Trigger: CTCTGGGACACTCAGTCTGATGGGGCAGGCTGGTCAGAAGACATAGAGCCATGGTGTGTTTGGAACTTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403581.5
CDS GCA 72 bp CCTCATAGAAGCGAATCTTGTCCCGAAGGATCACCATaGCTTTTGTCAGCAGCTGGTTCTGCAGGTACTCCG +
Preference number: 6 (lower is better)
Translates to: PHRSESCPEGSP*LLSAAGSAGTP
Trigger: CGGAGTACCTGCAGAACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGGACAAGATTCGCTTCTATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000006251.11
ENST00000336985.11
ENST00000403581.5
ENST00000403696.5
ENST00000431834.5
ENST00000432186.5
ENST00000432916.5
ENST00000457960.5
ENST00000492289.5
ENST00000492475.5
ENST00000611394.4
ENST00000617066.4
ENST00000624862.3
CDS CAA 72 bp AGAAGCGAATCTTGTCCCGAAGGATCACCATGCCTTTaGTCAGCAGCTGGTTCTACCTGCAGGTACTCCGTG +
Preference number: 6 (lower is better)
Translates to: RSESCPEGSPCL*SAAGSTCRYSV
Trigger: CACGGAGTACCTGCAGGTAGAACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGGACAAGATTCGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459857.5
CDS GCA 72 bp CCTCATAGAAGCGAATCTTGTCCCGAAGGATCACCATaGCTTTTGTCAGCAGCTGGTTCTACCTGCAGGTAC +
Preference number: 6 (lower is better)
Translates to: PHRSESCPEGSP*LLSAAGSTCRY
Trigger: GTACCTGCAGGTAGAACCAGCTGCTGACAAAAGGCATGGTGATCCTTCGGGACAAGATTCGCTTCTATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459857.5
CDS CAA 72 bp CTGGGCTTGCCAGACGTAGTGGTATGGGGACACATCTaGACAGGTGAGTCTCCTCATAGAAGCGAATCTTGT +
Preference number: 6 (lower is better)
Translates to: LGLPDVVVWGHI*TGESPHRSESC
Trigger: ACAAGATTCGCTTCTATGAGGAGACTCACCTGTCAAGATGTGTCCCCATACCACTACGTCTGGCAAGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492289.5