Pregenerated sensors for PRR4 (Homo sapiens)
Ensembl gene IDs: ENSG00000111215, ENSG00000263247Ensembl transcript IDs: ENST00000228811.8, ENST00000539179.5, ENST00000539285.2, ENST00000540107.2, ENST00000540808.2, ENST00000542658.1, ENST00000542881.5, ENST00000544994.5, ENST00000570404.5, ENST00000571255.1, ENST00000572366.5, ENST00000573721.1, ENST00000573883.1, ENST00000573913.5, ENST00000574037.1, ENST00000574424.5, ENST00000576262.5, ENST00000576644.1, ENST00000576680.1, ENST00000576734.1, ENST00000576999.5, ENST00000614435.2, ENST00000631473.1, ENST00000631750.1, ENST00000631790.1, ENST00000631872.1, ENST00000632186.1, ENST00000632373.1, ENST00000632875.1, ENST00000632884.1, ENST00000633267.1, ENST00000633483.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GATGCTTCCTGCAGGCTGACAGAAGGAAATCGGGGTAGAGAGAGTTaGCGGTGTCCTCGTCGGGGTGGTCGTTGCTGGTATGGTGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: DASCRLTEGNRGRES*RCPRRGGRCWYGES Trigger: ACTTTCACCATACCAGCAACGACCACCCCGACGAGGACACCGTCAACTCTCTCTACCCCGATTTCCTTCTGTCAGCCTGCAGGAAGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000540107.2 ENST00000574037.1 ENST00000633483.1 |
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| CDS TCA 90 bp | TTGCTGGTCTGTCCCTCTGGAAGAATGATGATGCTTCCTGCAGGCTaGCAGAAGGAAATCGGGGTAGAGAGAGTTGACGGTGTCCTCGTC | + |
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Preference number: 5 (lower is better) Translates to: LLVCPSGRMMMLPAG*QKEIGVERVDGVLV Trigger: GACGAGGACACCGTCAACTCTCTCTACCCCGATTTCCTTCTGTCAGCCTGCAGGAAGCATCATCATTCTTCCAGAGGGACAGACCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000228811.8 ENST00000539179.5 ENST00000539285.2 ENST00000540107.2 ENST00000572366.5 ENST00000573913.5 ENST00000574037.1 ENST00000574424.5 ENST00000576262.5 ENST00000576680.1 ENST00000614435.2 ENST00000631473.1 ENST00000631790.1 ENST00000633267.1 ENST00000633483.1 |
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| CDS TCA 90 bp | GAAAGTAAAGTCTTCATAGTTCACATCTGTGAAAACTTCCACTCTTaGGTAGATACAGCAGGTTCCAGCAGGCAAAATATTCTTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: ESKVFIVHICENFHS*VDTAGSSRQNILLQ Trigger: CTGCAGAAGAATATTTTGCCTGCTGGAACCTGCTGTATCTACTCAAGAGTGGAAGTTTTCACAGATGTGAACTATGAAGACTTTACTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000573913.5 ENST00000631790.1 |
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| CDS TCA 90 bp | CCACTATGTAGAAAGACACAAATGTATTATCCAGTCCTCTATGTCTaGCAGTACTCTGATGTTTGTTTATCTCTTTCATTGATTCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: PLCRKTQMYYPVLYV*QYSDVCLSLSLILH Trigger: ATGCAGAATCAATGAAAGAGATAAACAAACATCAGAGTACTGTCAGACATAGAGGACTGGATAATACATTTGTGTCTTTCTACATAGTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000539285.2 ENST00000542658.1 ENST00000576644.1 ENST00000576680.1 ENST00000632875.1 ENST00000633267.1 |
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| CDS CCA 72 bp | AGGTGGGGGAGGATGGCGGTGATGGCCTCCTGGTTTTaGTGGTCTCTGCTGAGGACCATCATCTTGGTTACC | + |
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Preference number: 6 (lower is better) Translates to: RWGRMAVMASWF*WSLLRTIILVT Trigger: GGTAACCAAGATGATGGTCCTCAGCAGAGACCACCAAAACCAGGAGGCCATCACCGCCATCCTCCCCCACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 15 transcripts: ENST00000228811.8 ENST00000539179.5 ENST00000539285.2 ENST00000540808.2 ENST00000572366.5 ENST00000573883.1 ENST00000573913.5 ENST00000574424.5 ENST00000576262.5 ENST00000576680.1 ENST00000614435.2 ENST00000631473.1 ENST00000631790.1 ENST00000631872.1 ENST00000633267.1 |
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| CDS TCA 72 bp | TGCAGGCTGACAGAAGGAAATCGGGGTAGAGAGAGTTaGCGGTGTCCTCGTCGGGGTGGTCGTTGCTGGTAT | + |
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Preference number: 6 (lower is better) Translates to: CRLTEGNRGRES*RCPRRGGRCWY Trigger: ATACCAGCAACGACCACCCCGACGAGGACACCGTCAACTCTCTCTACCCCGATTTCCTTCTGTCAGCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000540107.2 ENST00000574037.1 ENST00000633483.1 |
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| CDS CCA 72 bp | GGTTGCTCCTGGGGATGTCTTGCTGGTCTGTCCCTCTaGAAGAATGATGATGCTTCCTGCAGGCTGGTATGG | + |
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Preference number: 6 (lower is better) Translates to: GCSWGCLAGLSL*KNDDASCRLVW Trigger: CCATACCAGCCTGCAGGAAGCATCATCATTCTTCCAGAGGGACAGACCAGCAAGACATCCCCAGGAGCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000542881.5 ENST00000544994.5 ENST00000570404.5 ENST00000576999.5 ENST00000632373.1 ENST00000632884.1 |
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| CDS CCA 72 bp | GGTTGCTCCTGGGGATGTCTTGCTGGTCTGTCCCTCTaGAAGAATGATGATGCTTCCTGCAGGCTGACAGAA | + |
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Preference number: 6 (lower is better) Translates to: GCSWGCLAGLSL*KNDDASCRLTE Trigger: TTCTGTCAGCCTGCAGGAAGCATCATCATTCTTCCAGAGGGACAGACCAGCAAGACATCCCCAGGAGCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000228811.8 ENST00000539179.5 ENST00000539285.2 ENST00000540107.2 ENST00000572366.5 ENST00000573913.5 ENST00000574037.1 ENST00000574424.5 ENST00000576262.5 ENST00000576680.1 ENST00000614435.2 ENST00000631473.1 ENST00000631790.1 ENST00000633267.1 ENST00000633483.1 |
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| CDS GCA 72 bp | GCTGGTCTGTCCCTCTGGAAGAATGATGATGCTTCCTaGAGGCTGACAGAAGGAAATCGGGGTAGAGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: AGLSLWKNDDAS*RLTEGNRGRES Trigger: ACTCTCTCTACCCCGATTTCCTTCTGTCAGCCTGCAGGAAGCATCATCATTCTTCCAGAGGGACAGACCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000228811.8 ENST00000539179.5 ENST00000539285.2 ENST00000540107.2 ENST00000572366.5 ENST00000573913.5 ENST00000574037.1 ENST00000574424.5 ENST00000576262.5 ENST00000576680.1 ENST00000614435.2 ENST00000631473.1 ENST00000631790.1 ENST00000633267.1 ENST00000633483.1 |
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| CDS TCA 72 bp | TGTCCCTCTGGAAGAATGATGATGCTTCCTGCAGGCTaGCAGAAGGAAATCGGGGTAGAGAGAGTTGACGGT | + |
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Preference number: 6 (lower is better) Translates to: CPSGRMMMLPAG*QKEIGVERVDG Trigger: ACCGTCAACTCTCTCTACCCCGATTTCCTTCTGTCAGCCTGCAGGAAGCATCATCATTCTTCCAGAGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000228811.8 ENST00000539179.5 ENST00000539285.2 ENST00000540107.2 ENST00000572366.5 ENST00000573913.5 ENST00000574037.1 ENST00000574424.5 ENST00000576262.5 ENST00000576680.1 ENST00000614435.2 ENST00000631473.1 ENST00000631790.1 ENST00000633267.1 ENST00000633483.1 |
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| CDS CAA 72 bp | TCATACCTGCCACTGAATTCTAGATTACCAGAGTGGTaGCTCCTGGGGATGTCTTGCTGGTCTGTCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SYLPLNSRLPEW*LLGMSCWSVPL Trigger: CAGAGGGACAGACCAGCAAGACATCCCCAGGAGCAACCACTCTGGTAATCTAGAATTCAGTGGCAGGTATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000539179.5 ENST00000572366.5 ENST00000631473.1 |
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| CDS GCA 72 bp | ATATCCAAGTGCTTCGACATACCTCATATGAACAGATaGAGTCTTATTCCCCTTCTCTTCAAAACAGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: ISKCFDIPHMNR*SLIPLLFKTGL Trigger: AAGGCCTGTTTTGAAGAGAAGGGGAATAAGACTGCATCTGTTCATATGAGGTATGTCGAAGCACTTGGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000576734.1 ENST00000631750.1 |
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| CDS TCA 72 bp | GTCTTCATAGTTCACATCTGTGAAAACTTCCACTCTTaGGTAGATACAGCAGGTTCCAGCAGGCAAAATATT | + |
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Preference number: 6 (lower is better) Translates to: VFIVHICENFHS*VDTAGSSRQNI Trigger: AATATTTTGCCTGCTGGAACCTGCTGTATCTACTCAAGAGTGGAAGTTTTCACAGATGTGAACTATGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000573913.5 ENST00000631790.1 |
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| CDS CAA 72 bp | GCCATCTGTAAAACGCACACAATAACAATACCCTCCTaGAGTAGGCTTTATGAGAAGTTAGTACACTACTTG | + |
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Preference number: 6 (lower is better) Translates to: AICKTHTITIPS*SRLYEKLVHYL Trigger: CAAGTAGTGTACTAACTTCTCATAAAGCCTACTCAAGGAGGGTATTGTTATTGTGTGCGTTTTACAGATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571255.1 ENST00000632186.1 |
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| CDS CAA 72 bp | TTAAAAACTTTGATCACTGTGAGTAACCTGTCCATCTaGCCTTCTGAAGAAGAAGCTTTACACTGGAATGTA | + |
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Preference number: 6 (lower is better) Translates to: LKTLITVSNLSI*PSEEEALHWNV Trigger: TACATTCCAGTGTAAAGCTTCTTCTTCAGAAGGCAAGATGGACAGGTTACTCACAGTGATCAAAGTTTTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000573721.1 |
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| CDS TCA 72 bp | AGAAAGACACAAATGTATTATCCAGTCCTCTATGTCTaGCAGTACTCTGATGTTTGTTTATCTCTTTCATTG | + |
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Preference number: 6 (lower is better) Translates to: RKTQMYYPVLYV*QYSDVCLSLSL Trigger: CAATGAAAGAGATAAACAAACATCAGAGTACTGTCAGACATAGAGGACTGGATAATACATTTGTGTCTTTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000539285.2 ENST00000542658.1 ENST00000576644.1 ENST00000576680.1 ENST00000632875.1 ENST00000633267.1 |
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