RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRR33 (Homo sapiens)

Ensembl gene IDs: ENSG00000283787

Ensembl transcript IDs: ENST00000640310.2, ENST00000672118.3

Found 355 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCTCCCTCCTCATCCAGCTGTCAAAGCCTGGGCATGGCCAGTGCTaGGACCCTCGCTGTCCCACCAGCGAATCCCTCGAGTTCTGCCCC +
Preference number: 1 (lower is better)
Translates to: GSLLIQLSKPGHGQC*DPRCPTSESLEFCP
Trigger: GGGGCAGAACTCGAGGGATTCGCTGGTGGGACAGCGAGGGTCTCAGCACTGGCCATGCCCAGGCTTTGACAGCTGGATGAGGAGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640310.2
3UTR GCA 90 bp TTCCCCTCACACCACTGCAGCCCAGGGGCTCCAGCTCGTCCTCTCTaGCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTTCCCTC +
Preference number: 1 (lower is better)
Translates to: FPSHHCSPGAPARPL*PVHLTTLLTMQTSL
Trigger: GAGGGAAGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCCTGGGCTGCAGTGGTGTGAGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
3UTR-3UTR TCA 90 bp GTCAAAGCCTGGGCATGGCCAGTGCTGAGACCCTCGCTGTCCCACCAGCGAATCCTGGCCCCAAACCTTTaGCAGCAAAAGGTGACAGCA +
Preference number: 2 (lower is better)
Translates to: VKAWAWPVLRPSLSHQRILAPNL*QQKVTA
Trigger: TGCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAG...GATTCGCTGGTGGGACAGCGAGGGTCTCAGCACTGGCCATGCCCAGGCTTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640310.2
3UTR-3UTR GCA 90 bp CACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTTTCCCCTCACACCACTaGAGCCCAGGGGCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: HPCLSKQRSGPKPLTAKGFPSHH*SPGAPA
Trigger: AGCTGGAGCCCCTGGGCTGCAGTGGTGTGAGGGGAA...ACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
3UTR-3UTR GCA 90 bp ACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAACCCCTTGGGCCCTGGTaGATCTTCATGCAGCAACTA +
Preference number: 2 (lower is better)
Translates to: TAPMPQQAEIWPQTFDSKPLGPW*IFMQQL
Trigger: TAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGG...TTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
3UTR-3UTR GCA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTTTCCCCTCACACCACTaGAGCCCAGGGGCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPFPSHH*SPGAPA
Trigger: AGCTGGAGCCCCTGGGCTGCAGTGGTGTGAGGGGAA...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
3UTR-3UTR CCA 90 bp GTCAGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCGCACCCCATGCCCCTTaGGCCCTGGTGCATCTTCAT +
Preference number: 2 (lower is better)
Translates to: VSRCSPLPSYLKFSSQGPAPHAP*ALVHLH
Trigger: ATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGC...GGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
3UTR-3UTR CCA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTGCACCCCATGCCCCTTaGGCCCTGGTGCATCTTCAT +
Preference number: 2 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPAPHAP*ALVHLH
Trigger: ATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGC...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
3UTR-3UTR CCA 90 bp AGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATTCCATCCCATGGTCCTaGGCTCTGGGGGCCATTCTG +
Preference number: 2 (lower is better)
Translates to: SRCSPLPSYLKFSSQGPHSIPWS*ALGAIL
Trigger: CAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGA...ATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
3UTR-3UTR GCA 90 bp AGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTGGTGCATCTTCATaGAGCAACTATGGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: SRCSPLPSYLKFSSQGPHPGASS*SNYGPP
Trigger: TGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGG...ATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
3UTR GCA 72 bp GACCCTCGCTGTCCCACCAGCGAATCCCTCGAGTTCTaGCCCCTCAGGCTGTCAGCCCAGGTAGGGGAAGCA +
Preference number: 3 (lower is better)
Translates to: DPRCPTSESLEF*PLRLSAQVGEA
Trigger: TGCTTCCCCTACCTGGGCTGACAGCCTGAGGGGGCAGAACTCGAGGGATTCGCTGGTGGGACAGCGAGGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640310.2
3UTR CCA 72 bp GGGCTCCCTCCTCATCCAGCTGTCAAAGCCTGGGCATaGCCAGTGCTGAGACCCTCGCTGTCCCACCAGCGA +
Preference number: 3 (lower is better)
Translates to: GLPPHPAVKAWA*PVLRPSLSHQR
Trigger: TCGCTGGTGGGACAGCGAGGGTCTCAGCACTGGCCATGCCCAGGCTTTGACAGCTGGATGAGGAGGGAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640310.2
3UTR TCA 72 bp CTCATCCAGCTGTCAAAGCCTGGGCATGGCCAGTGCTaGGACCCTCGCTGTCCCACCAGCGAATCCCTCGAG +
Preference number: 3 (lower is better)
Translates to: LIQLSKPGHGQC*DPRCPTSESLE
Trigger: CTCGAGGGATTCGCTGGTGGGACAGCGAGGGTCTCAGCACTGGCCATGCCCAGGCTTTGACAGCTGGATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640310.2
3UTR-3UTR CAA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCTGCACCCCATGCCCCTaGGGCCCTGGTGCATCTTCA +
Preference number: 3 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPCTPCP*GPGASS
Trigger: TGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCA...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
3UTR-3UTR CAA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTTGCACCCCATGCCCCTaGGGCCCTGGTGCATCTTCA +
Preference number: 3 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPCTPCP*GPGASS
Trigger: TGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCA...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp GCCGAGAGAGAGGTCACGCTGGGCCCTCCTCCACCCCTGATGAGCCCCTCCCTGGGCAGTGGGCGGATGTaGGCCACTGGGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: AEREVTLGPPPPLMSPSLGSGRM*ATGTRG
Trigger: GCCCCTGGTCCCAGTGGCTCACATCCGCCCACTGCC...CAGGGAGGGGCTCATCAGGGGTGGAGGAGGGCCCAGCGTGACCTCTCTCTCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR TCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGGCTGCGAGCCAGCGGTaGGGGGTGGCGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMAASQR*GVAAKR
Trigger: CCTCTTGGCCGCCACCCCTCACCGCTGGCTCGCAGC...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp GCCGAGAGAGAGGTCACGCTGGGCCCTCCTCCACCCCTGATGAGCCCCTCCCTGGCCACGTCCAGCCACTaGGCCGGGGCTTGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: AEREVTLGPPPPLMSPSLATSSH*AGAWVQ
Trigger: TTGCACCCAAGCCCCGGCTCAGTGGCTGGACGTGGC...CAGGGAGGGGCTCATCAGGGGTGGAGGAGGGCCCAGCGTGACCTCTCTCTCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR TCA 90 bp GCCGAGAGAGAGGTCACGCTGGGCCCTCCTCCACCCCTGATGAGCCCCTCCCTGGGGCATGGCCAGTGCTaGGACCCTCGCTGTCCCACC +
Preference number: 4 (lower is better)
Translates to: AEREVTLGPPPPLMSPSLGHGQC*DPRCPT
Trigger: GGTGGGACAGCGAGGGTCTCAGCACTGGCCATGCCC...CAGGGAGGGGCTCATCAGGGGTGGAGGAGGGCCCAGCGTGACCTCTCTCTCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CCA 90 bp GCCGAGAGAGAGGTCACGCTGGGCCCTCCTCCACCCCTGATGAGCCCCTCCCTGCAACACCGTGTGGGCTaGGGTGGGAGACGGAGACGC +
Preference number: 4 (lower is better)
Translates to: AEREVTLGPPPPLMSPSLQHRVG*GGRRRR
Trigger: GCGTCTCCGTCTCCCACCCCAGCCCACACGGTGTTG...CAGGGAGGGGCTCATCAGGGGTGGAGGAGGGCCCAGCGTGACCTCTCTCTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CCA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGGAGGGGGCCGGGTaGCCTCCTGCAGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: DADGQASLTAPMPQQAEIWEGAG*PPAASG
Trigger: CCCGGAAGCTGCAGGAGGCCACCCGGCCCCCTCCCA...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp CCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTGCTGCGAGCCAGCGGTaGGGGGTGGCGGCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PCPLGPGASSCSNYGPPAAASQR*GVAAKR
Trigger: CCTCTTGGCCGCCACCCCTCACCGCTGGCTCGCAGC...AGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCGGGTGAGCCCCAAGTaGCAGGCATGCCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMRVSPK*QACPWP
Trigger: TGGCCAGGGGCATGCCTGTCACTTGGGGCTCACCCG...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACGGCAGTGGGCGGATGTaGGCCACTGGGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHGSGRM*ATGTRG
Trigger: GCCCCTGGTCCCAGTGGCTCACATCCGCCCACTGCC...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCGGGAGTCCTGGGGGCTaGCGCTGGTGGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASAGSPGG*RWWGLA
Trigger: AGCCAGCCCCCACCAGCGGCAGCCCCCAGGACTCCC...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCGGGCCCTCAGCAGCGTaGGGGGCTGTGACCTCCTGG +
Preference number: 4 (lower is better)
Translates to: DADGQASLTAPMPQQAEIGPSAA*GAVTSW
Trigger: CCAGGAGGTCACAGCCCCGCACGCTGCTGAGGGCCC...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGGGCCGGGTGGCCTCCTaGAGCTTCCGGGCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMGRVAS*SFRALK
Trigger: CTTCAACGCCCGGAAGCTGCAGGAGGCCACCCGGCC...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCCGCAGACCTCCTGTCTaGGGTGGCCCGGCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: DADGQASLTAPMPQQAEIRRPPV*GGPAKP
Trigger: CGGCTTGGCCGGGCCACCCCAGACAGGAGGTCTGCG...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GCCGAGAGAGAGGTCACGCTGGGCCCTCCTCCACCCCTGATGAGCCCCTCCCTGAAGGGACTGGCAGCCTaGACTGTGGTGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: AEREVTLGPPPPLMSPSLKGLAA*TVVGSG
Trigger: CCCACTGCCCACCACAGTCCAGGCTGCCAGTCCCTT...CAGGGAGGGGCTCATCAGGGGTGGAGGAGGGCCCAGCGTGACCTCTCTCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CCA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCGCCGGGTGGCGGCCGTaGTACAGGGGGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWAAGWRP*YRGLLR
Trigger: CCTGAGGAGCCCCCTGTACCACGGCCGCCACCCGGC...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGAGGCCCAGGCAGGGCTaGACACTCGCTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMRPRQG*TLARPQ
Trigger: CTGAGGCCGAGCGAGTGTCCAGCCCTGCCTGGGCCT...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCGGGGGTGGGCACCTCTaGCTCCAGGCTCTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARAGGGHL*LQALPR
Trigger: CCGCGGCAGAGCCTGGAGCCAGAGGTGCCCACCCCC...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACCGGCATCCCACATCCTaGAGGTCCGGGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHRHPTS*RSGRRG
Trigger: CCCCCGCCTCCCGGACCTCCAGGATGTGGGATGCCG...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTTGGGAGGGGGCCGGGTaGCCTCCTGCAGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: PCPLGPGASSCSNYGPPAWEGAG*PPAASG
Trigger: CCCGGAAGCTGCAGGAGGCCACCCGGCCCCCTCCCA...AGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACGGATGGAGCGGACTGTaGGAGGGGGCCGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHGWSGL*EGAGWP
Trigger: AGGCCACCCGGCCCCCTCCCACAGTCCGCTCCATCC...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTCTGCCCCCAGACACGTaGGGGGCGCCCTGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTLPPDT*GAPCCR
Trigger: GCGACAACAGGGCGCCCCTCACGTGTCTGGGGGCAG...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACGGATGTGCACCTGGGTaGCGTGGGTGCCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADGCAPG*RGCPHP
Trigger: GGGGTGGGGGCACCCACGTCACCCAGGTGCACATCC...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GCCGAGAGAGAGGTCACGCTGGGCCCTCCTCCACCCCTGATGAGCCCCTCCCTGGCCCCCTGCACCCCATaGCTATGTTCCAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AEREVTLGPPPPLMSPSLAPCTP*LCSSFL
Trigger: CAGGAAGCTGGAACATAGGCATGGGGTGCAGGGGGC...CAGGGAGGGGCTCATCAGGGGTGGAGGAGGGCCCAGCGTGACCTCTCTCTCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR GCA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACCCAGGGTGGGCAGGCTaGTTGGCAGGCAGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADPGWAG*LAGRPP
Trigger: AGGCGGCCTGCCTGCCAAGCAGCCTGCCCACCCTGG...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GCCGAGAGAGAGGTCACGCTGGGCCCTCCTCCACCCCTGATGAGCCCCTCCCTGGCCTCCTCCAGCAGCTaGTTCTTGAGCCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: AEREVTLGPPPPLMSPSLASSSS*FLSHVQ
Trigger: CTGGACGTGGCTCAAGAAGCAGCTGCTGGAGGAGGC...CAGGGAGGGGCTCATCAGGGGTGGAGGAGGGCCCAGCGTGACCTCTCTCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR GCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTAGGCTGGCTGGGGTGTaGTCCCCACCGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTRLAGV*SPPLGP
Trigger: AGGGCCCAGCGGTGGGGAGCACACCCCAGCCAGCCT...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCCTTCCCAGGCTGCCCTaGACCCCATGCCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: DADGQASLTAPMPQQAEILPRLP*TPCPLG
Trigger: GCCCAAGGGGCATGGGGTGCAGGGCAGCCTGGGAAG...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGGGGGAGCAGGCTCTGTaGGCTTGCAGGAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMGEQAL*ACRRQV
Trigger: GACCTGCCTCCTGCAAGCCCACAGAGCCTGCTCCCC...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCGGTGGGCAGGCTGCTTaGCAGGCAGGCCGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARAGGQAA*QAGRLP
Trigger: GGGAAGGCGGCCTGCCTGCCAAGCAGCCTGCCCACC...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCGGTGGGCAGGCTGCTTaGCAGGCAGGCCGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASAGGQAA*QAGRLP
Trigger: GGGAAGGCGGCCTGCCTGCCAAGCAGCCTGCCCACC...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCGGCCAAGCCCAGGGCTaGAAGAGCGGCTGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWAGQAQG*KSGCPQ
Trigger: CTGGGGGCAGCCGCTCTTCCAGCCCTGGGCTTGGCC...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCGGCCAAGCCCAGGGCTaGAAGAGCGGCTGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARAGQAQG*KSGCPQ
Trigger: CTGGGGGCAGCCGCTCTTCCAGCCCTGGGCTTGGCC...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCCCGTGTGGGCTGGGGTaGGAGACGGAGACGCGGGTG +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARAPCGLG*ETETRV
Trigger: CACCCGCGTCTCCGTCTCCCACCCCAGCCCACACGG...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCGGTTCCCTGGAGGCTTaGGCCGCACACCTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: DADGQASLTAPMPQQAEIGSLEA*AAHLGC
Trigger: GCACCCGAGGTGTGCGGCCCAAGCCTCCAGGGAACC...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACGCGGAAGGCCCTGGGTaGAGCGAGGTGTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHAEGPG*SEVCAS
Trigger: GGAGGCACACACCTCGCTCCACCCAGGGCCTTCCGC...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGAGGTGCGGAAGGCCCTaGGTGGAGCGAGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMRCGRP*VERGVC
Trigger: GCACACACCTCGCTCCACCCAGGGCCTTCCGCACCT...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCTGGGCACTGAGGCCTaGAAGCCGGGTGGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASALGTEA*KPGGGR
Trigger: ACGGCCGCCACCCGGCTTCCAGGCCTCAGTGCCCAG...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCCTGGGCACTGAGGCCTaGAAGCCGGGTGGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARALGTEA*KPGGGR
Trigger: ACGGCCGCCACCCGGCTTCCAGGCCTCAGTGCCCAG...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGGGCAGGTCGGGGCTATaGGCACCACAACCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMGRSGL*APQPWH
Trigger: GTGCCAGGGTTGTGGTGCCCATAGCCCCGACCTGCC...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCGGCATCCCACATCCTaGAGGTCCGGGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASARHPTS*RSGRRG
Trigger: CCCCCGCCTCCCGGACCTCCAGGATGTGGGATGCCG...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTGTGCTCCCCACCGCTaGGCCCTGCCAGGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTCAPHR*ALPGAL
Trigger: AAGGGCGCCTGGCAGGGCCCAGCGGTGGGGAGCACA...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTGCGGGTGAGGCTGGCTaGGGTGTGCTCCCCACCGCT +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTAGEAG*GVLPTA
Trigger: AGCGGTGGGGAGCACACCCCAGCCAGCCTCACCCGC...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp CCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTGCCACGTCCAGCCACTaGGCCGGGGCTTGGGTGCAA +
Preference number: 4 (lower is better)
Translates to: PCPLGPGASSCSNYGPPAATSSH*AGAWVQ
Trigger: TTGCACCCAAGCCCCGGCTCAGTGGCTGGACGTGGC...AGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCGCAGCTTCCGGGCGTTaGAGCGAGGCCGGTACAGGA +
Preference number: 4 (lower is better)
Translates to: DADGQASLTAPMPQQAEIAASGR*SEAGTG
Trigger: TCCTGTACCGGCCTCGCTTCAACGCCCGGAAGCTGC...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGGGTGCCAGCTGGATGTaGACCTGGGTGACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMGASWM*TWVTWV
Trigger: CACCCACGTCACCCAGGTGCACATCCAGCTGGCACC...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CCCTTCTCTGTCCCGCTTGGCCAAGCTGTTCCCATAGGGTTGGGACTGAGGGCTGGGGCAGGCACCTCCTaGTCTGTGGGGGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: PFSVPLGQAVPIGLGLRAGAGTS*SVGVGT
Trigger: GGTGCCCACCCCCACAGAGCAGGAGGTGCCTGCCCC...AGCCCTCAGTCCCAACCCTATGGGAACAGCTTGGCCAAGCGGGACAGAGAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR GCA 90 bp CCCTTCTCTGTCCCGCTTGGCCAAGCTGTTCCCATAGGGTTGGGACTGAGGGCTAGGGCGGGCACCTCCTaGTCTGTGGGGGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: PFSVPLGQAVPIGLGLRARAGTS*SVGAGT
Trigger: GGTGCCTGCCCCCACAGAGCAGGAGGTGCCCGCCCT...AGCCCTCAGTCCCAACCCTATGGGAACAGCTTGGCCAAGCGGGACAGAGAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR GCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCGGCCGGGTGGCCTCCTaGAGCTTCCGGGCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARAGRVAS*SFRALK
Trigger: CTTCAACGCCCGGAAGCTGCAGGAGGCCACCCGGCC...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTCTTCCCAGGCTGCCCTaGACCCCATGCCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PCPLGPGASSCSNYGPPALPRLP*TPCPLG
Trigger: GCCCAAGGGGCATGGGGTGCAGGGCAGCCTGGGAAG...AGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCGCCAGCGGTGAGGGGTaGCGGCCAAGAGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARAASGEG*RPRGLG
Trigger: TCCCAAGCCTCTTGGCCGCCACCCCTCACCGCTGGC...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACCAACACCGTGTGGGCTaGGGTGGGAGACGGAGACGC +
Preference number: 4 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHQHRVG*GGRRRR
Trigger: GCGTCTCCGTCTCCCACCCCAGCCCACACGGTGTTG...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTGGCCGCAACACCGTGTaGGCTGGGGTGGGAGACGGA +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTGRNTV*AGVGDG
Trigger: TCCGTCTCCCACCCCAGCCCACACGGTGTTGCGGCC...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGAGCTCGACTGTGCCTTaGGGACTTTGGGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMSSTVP*GLWGGP
Trigger: GGGGCCACCCCAAAGTCCCCAAGGCACAGTCGAGCT...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCGGTCCAAGGAGGACCTaGGGCCAGGGGTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASAGPRRT*GQGCGG
Trigger: GCCTCCACACCCCTGGCCCCAGGTCCTCCTTGGACC...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCGGTCCAAGGAGGACCTaGGGCCAGGGGTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWAGPRRT*GQGCGG
Trigger: GCCTCCACACCCCTGGCCCCAGGTCCTCCTTGGACC...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTGGTTCCCTGGAGGCTTaGGCCGCACACCTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: PCPLGPGASSCSNYGPPAGSLEA*AAHLGC
Trigger: GCACCCGAGGTGTGCGGCCCAAGCCTCCAGGGAACC...AGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCGGGCCGGGTAGGTTCTaGGGCCGAGGCTACAACCTG +
Preference number: 4 (lower is better)
Translates to: DADGQASLTAPMPQQAEIGPGRF*GRGYNL
Trigger: CAGGTTGTAGCCTCGGCCCCAGAACCTACCCGGCCC...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCTGCACCTGGGTGACGTaGGTGCCCCCACCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWACTWVT*VPPPPE
Trigger: CTCTGGGGGTGGGGGCACCCACGTCACCCAGGTGCA...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCTGCACCTGGGTGACGTaGGTGCCCCCACCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASACTWVT*VPPPPE
Trigger: CTCTGGGGGTGGGGGCACCCACGTCACCCAGGTGCA...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGTGGCAGCCTGGACTGTaGTGGGCAGTGGGCGGATGT +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMWQPGL*WAVGGC
Trigger: ACATCCGCCCACTGCCCACCACAGTCCAGGCTGCCA...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTCTCTGCCAGGGCCCATaGGGACCAGGCTGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTLCQGP*GPGCAV
Trigger: CACCGCACAGCCTGGTCCCCATGGGCCCTGGCAGAG...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCAGGCCCAGGCAGGGCTaGACACTCGCTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWARPRQG*TLARPQ
Trigger: CTGAGGCCGAGCGAGTGTCCAGCCCTGCCTGGGCCT...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTGGGCACGGAGGCTCTaGGGCCTCCTCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTWARRL*GLLQQL
Trigger: CAGCTGCTGGAGGAGGCCCCAGAGCCTCCGTGCCCA...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCCAGTCGCTGTGCGGTTaGAGTTCTTGGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: DADGQASLTAPMPQQAEIQSLCG*SSWAGG
Trigger: GCCCCCAGCCCAAGAACTTCAACCGCACAGCGACTG...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCATGGCCAAGCCAGCCTaGCCGCACCCATGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWAMAKPA*PHPCLS
Trigger: GCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCAT...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp GTCAAAGCCTGGGCATGGCCAGTGCTGAGACCCTCGCTGTCCCACCAGCGAATCCCACCAGAGCCTGGCTaGCTGCTGAGTAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: VKAWAWPVLRPSLSHQRIPPEPG*LLSRPL
Trigger: GAGGGGCCTACTCAGCAGTCAGCCAGGCTCTGGTGG...GATTCGCTGGTGGGACAGCGAGGGTCTCAGCACTGGCCATGCCCAGGCTTTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR GCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCCCAGCTTCCTGGGTCTaGAGGTCCAGCCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTPASWV*RSSRLA
Trigger: TGCCAGCCGGCTGGACCTGCAGACCCAGGAAGCTGG...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCAGCTTCCTGGGTCTaGAGGTCCAGCCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWAPASWV*RSSRLA
Trigger: TGCCAGCCGGCTGGACCTGCAGACCCAGGAAGCTGG...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGGGGGCGGAAGGAGCCTaGTTAGGACTGCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMGAEGA*LGLLSA
Trigger: AGCTGAGAGCAGTCCTAAGCAGGCTCCTTCCGCCCC...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCGAGCCGGGGCTTGGGTaGAACTTTGGGGACAGGGCA +
Preference number: 4 (lower is better)
Translates to: DADGQASLTAPMPQQAEIEPGLG*NFGDRA
Trigger: TGCCCTGTCCCCAAAGTTGCACCCAAGCCCCGGCTC...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACGCAGGTCCAGCCGGCTaGCACCCTCCATGTACCCAG +
Preference number: 4 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADAGPAG*HPPCTQ
Trigger: CTGGGTACATGGAGGGTGCCAGCCGGCTGGACCTGC...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCCTTCTCTGTCCCGCTTGGCCAAGCTGTTCCCATAGGGTTGGGACTGAGGGCTGCCAGCGGTGAGGGGTaGCGGCCAAGAGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PFSVPLGQAVPIGLGLRAASGEG*RPRGLG
Trigger: TCCCAAGCCTCTTGGCCGCCACCCCTCACCGCTGGC...AGCCCTCAGTCCCAACCCTATGGGAACAGCTTGGCCAAGCGGGACAGAGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CCA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACAGCTCGACTGTGCCTTaGGGACTTTGGGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHSSTVP*GLWGGP
Trigger: GGGGCCACCCCAAAGTCCCCAAGGCACAGTCGAGCT...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCCAAGTTGTCCTTCCCTaGCTTGGGCAGCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: DADGQASLTAPMPQQAEIQVVLP*LGQQGR
Trigger: CCGCCCCTGCTGCCCAAGCCAGGGAAGGACAACTTG...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTAGGTGCGGAAGGCCCTaGGTGGAGCGAGGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTRCGRP*VERGVC
Trigger: GCACACACCTCGCTCCACCCAGGGCCTTCCGCACCT...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCGGCAGGTCGGGGCTATaGGCACCACAACCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTGRSGL*APQPWH
Trigger: GTGCCAGGGTTGTGGTGCCCATAGCCCCGACCTGCC...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCATCACACCACAGGGTaGGGCAGCTGTCCTCCTACC +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMHHTTG*GSCPPT
Trigger: GGTAGGAGGACAGCTGCCCCACCCTGTGGTGTGATG...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR TCA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTCCAGCCAGAGGTCCTaGCCCAGGGCACAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADSSQRS*PRAQVL
Trigger: GAGCACTTGTGCCCTGGGTCAGGACCTCTGGCTGGA...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCAGACGGAGACGCGGGTaGGCCCCAAGTGACAGGCAT +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASARRRRG*APSDRH
Trigger: ATGCCTGTCACTTGGGGCTCACCCGCGTCTCCGTCT...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCCTGCCAGGGACATGCTaGGCTCGACTGTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARALPGTC*ARLCLG
Trigger: CCCAAGGCACAGTCGAGCTCAGCATGTCCCTGGCAG...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACCTGCCAGGGACATGCTaGGCTCGACTGTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADLPGTC*ARLCLG
Trigger: CCCAAGGCACAGTCGAGCTCAGCATGTCCCTGGCAG...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGGGACTTCTGCAGGGGTaGTGCCACGTGGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMGLLQG*CHVVDD
Trigger: ATCATCCACCACGTGGCATCACCCCTGCAGAAGTCC...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp GTCAAAGCCTGGGCATGGCCAGTGCTGAGACCCTCGCTGTCCCACCAGCGAATCGAATCCTGCGCTGGGTaGGGCCGATGGAGAACGTGG +
Preference number: 4 (lower is better)
Translates to: VKAWAWPVLRPSLSHQRIESCAG*GRWRTW
Trigger: CCACGTTCTCCATCGGCCTCACCCAGCGCAGGATTC...GATTCGCTGGTGGGACAGCGAGGGTCTCAGCACTGGCCATGCCCAGGCTTTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR TCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCGAATCCTGCGCTGGGTaGGGCCGATGGAGAACGTGG +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASAESCAG*GRWRTW
Trigger: CCACGTTCTCCATCGGCCTCACCCAGCGCAGGATTC...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp CCCTTCTCTGTCCCGCTTGGCCAAGCTGTTCCCATAGGGTTGGGACTGAGGGCTTTGGGCCTCCGCCACTaGCATGCGGTACAGCACGGC +
Preference number: 4 (lower is better)
Translates to: PFSVPLGQAVPIGLGLRALGLRH*HAVQHG
Trigger: GCCGTGCTGTACCGCATGTCAGTGGCGGAGGCCCAA...AGCCCTCAGTCCCAACCCTATGGGAACAGCTTGGCCAAGCGGGACAGAGAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR TCA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCAAAAGGGAGGATCAGTaGGAGGCCCAGGCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: DADGQASLTAPMPQQAEIKREDQ*EAQAPE
Trigger: CTCAGGGGCCTGGGCCTCTCACTGATCCTCCCTTTT...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCAGCCTGGCTGACTGCTaGGTAGGCCCCTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARASLADC*VGPSTL
Trigger: GAGAGTGGAGGGGCCTACTCAGCAGTCAGCCAGGCT...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR GCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCGACCCAGGGCACAAGTaGTCGCACTGGGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASADPGHK*SHWEAG
Trigger: GCCTGCTTCCCAGTGCGAGCACTTGTGCCCTGGGTC...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTGCCGCACACCTCGGGTaGCATCGACGCAGCCGATAT +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTAAHLG*HRRSRY
Trigger: ATATCGGCTGCGTCGATGGCACCCGAGGTGTGCGGC...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCGGTGCCAGCTGGATGTaGACCTGGGTGACGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARAGASWM*TWVTWV
Trigger: CACCCACGTCACCCAGGTGCACATCCAGCTGGCACC...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCATGGGGACCAGGCTGTaGGGTGAGGACTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARAMGTRL*GEDSSE
Trigger: CTCGCTGGAGTCCTCACCGCACAGCCTGGTCCCCAT...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp TCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCCTTCTTCTGTCAGGGCGGGCACCTCCTaGTCTGTGGGGGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: SSCSNYGPPARASAPSSVRAGTS*SVGAGT
Trigger: GGTGCCTGCCCCCACAGAGCAGGAGGTGCCCGCCCT...GACAGAAGAAGGGGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTCCCCTCACACCACTaGAGCCCAGGGGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTFPSHH*SPGAPA
Trigger: AGCTGGAGCCCCTGGGCTGCAGTGGTGTGAGGGGAA...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCCTTCTCTGTCCCGCTTGGCCAAGCTGTTCCCATAGGGTTGGGACTGAGGGCTGGGGAGCAGGCTCTGTaGGCTTGCAGGAGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PFSVPLGQAVPIGLGLRAGEQAL*ACRRQV
Trigger: GACCTGCCTCCTGCAAGCCCACAGAGCCTGCTCCCC...AGCCCTCAGTCCCAACCCTATGGGAACAGCTTGGCCAAGCGGGACAGAGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTGGACGTCTTCTCCTGTaGTGGAGTGGGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTGRLLL*WSGGVG
Trigger: GCCCACACCCCCACTCCACCACAGGAGAAGACGTCC...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACGCTACCGGCCTCCTCTaGATGACGGGACTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHATGLL*MTGLQE
Trigger: TTCCTGCAGTCCCGTCATCCAGAGGAGGCCGGTAGC...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCCTTCTTCTGTCGGAAGGAGGGAGTCCTaGGGGCTGCCGCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SSCSNYGPPARASAPSSVGRRES*GLPLVG
Trigger: CCCCACCAGCGGCAGCCCCCAGGACTCCCTCCTTCC...GACAGAAGAAGGGGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGGAGCCAGAGGCTCTCTaGTTTGGGGAAGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMEPEAL*FGEGGS
Trigger: ACTCCCTCCTTCCCCAAACCAGAGAGCCTCTGGCTC...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCAAGCCGCCCACCCTaGTTTCTGGGCACCACGTGT +
Preference number: 4 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWAPSRPP*FLGTTC
Trigger: ACACGTGGTGCCCAGAAACCAGGGTGGGCGGCTTGG...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCCTTCTTCTGTCCCGTGTGGGCTGGGGTaGGAGACGGAGACGCGGGTG +
Preference number: 4 (lower is better)
Translates to: SSCSNYGPPARASAPSSVPCGLG*ETETRV
Trigger: CACCCGCGTCTCCGTCTCCCACCCCAGCCCACACGG...GACAGAAGAAGGGGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACCCCAAGTACACAGCCTaGGTCAGGCCGCAACACCGT +
Preference number: 4 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHPKYTA*VRPQHR
Trigger: ACGGTGTTGCGGCCTGACCCAGGCTGTGTACTTGGG...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCGGCCTGTGTCTCCTGTaGTCCAAGGAGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASAGLCLL*SKEDLG
Trigger: CCCCAGGTCCTCCTTGGACCACAGGAGACACAGGCC...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTGGCCTGTGTCTCCTGTaGTCCAAGGAGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTGLCLL*SKEDLG
Trigger: CCCCAGGTCCTCCTTGGACCACAGGAGACACAGGCC...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACTCCTCCCTCCTGAGGTaGGAGGCCTGTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHSSLLR*EACVSC
Trigger: ACAGGAGACACAGGCCTCCCACCTCAGGAGGGAGGA...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACCAAGTTGTCCTTCCCTaGCTTGGGCAGCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADQVVLP*LGQQGR
Trigger: CCGCCCCTGCTGCCCAAGCCAGGGAAGGACAACTTG...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCTCCTGGTCATGGCTaGCCTCACTCACGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWAPPGHG*PHSRGT
Trigger: TGTCCCCCGTGAGTGAGGCCAGCCATGACCAGGAGG...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCGTGACCTCCTGGTCATaGCTGGCCTCACTCACGGGG +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARAVTSWS*LASLTG
Trigger: CCCCGTGAGTGAGGCCAGCCATGACCAGGAGGTCAC...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCGGGGCTGTGACCTCCTaGTCATGGCTGGCCTCACTC +
Preference number: 4 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWAGAVTS*SWLASL
Trigger: GAGTGAGGCCAGCCATGACCAGGAGGTCACAGCCCC...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCCTTCTTCTGTCAGCCTCGGCGGGGCGTaGGGCTTCAGGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SSCSNYGPPARASAPSSVSLGGA*GFRKAW
Trigger: CCACGCCTTCCTGAAGCCCCACGCCCCGCCGAGGCT...GACAGAAGAAGGGGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCGGTGATGCCACGTGGTaGATGATGGGGGTGTGCGGG +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTGDATW*MMGVCG
Trigger: CCCGCACACCCCCATCATCCACCACGTGGCATCACC...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCGCCGAGGCTACAACCTaGGGCCCCATGGCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTAEATT*GPMALN
Trigger: ATTCAGGGCCATGGGGCCCCAGGTTGTAGCCTCGGC...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCGCCGAGGCTACAACCTaGGGCCCCATGGCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASAAEATT*GPMALN
Trigger: ATTCAGGGCCATGGGGCCCCAGGTTGTAGCCTCGGC...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCAGCTGGATGTGCACCTaGGTGACGTGGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARASWMCT*VTWVPP
Trigger: TGGGGGCACCCACGTCACCCAGGTGCACATCCAGCT...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACAGCTGGATGTGCACCTaGGTGACGTGGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADSWMCT*VTWVPP
Trigger: TGGGGGCACCCACGTCACCCAGGTGCACATCCAGCT...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTGACTGTGGTGGGCAGTaGGCGGATGTGAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: PCPLGPGASSCSNYGPPADCGGQ*ADVSHW
Trigger: CCAGTGGCTCACATCCGCCCACTGCCCACCACAGTC...AGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTGGCAGCCTGGACTGTaGTGGGCAGTGGGCGGATGT +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTWQPGL*WAVGGC
Trigger: ACATCCGCCCACTGCCCACCACAGTCCAGGCTGCCA...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCAAGGGACTGGCAGCCTaGACTGTGGTGGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARAKGLAA*TVVGSG
Trigger: CCCACTGCCCACCACAGTCCAGGCTGCCAGTCCCTT...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCCCTCAGGCAAGGGACTaGCAGCCTGGACTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTPQARD*QPGLWW
Trigger: CCACCACAGTCCAGGCTGCCAGTCCCTTGCCTGAGG...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTCCTCAGGCAAGGGACTaGCAGCCTGGACTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTPQARD*QPGLWW
Trigger: CCACCACAGTCCAGGCTGCCAGTCCCTTGCCTGAGG...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp ACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAGGCCTGGAAGCCGGGTaGCGGCCGTGGTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: TAPMPQQAEIWPQTFDSKGLEAG*RPWYRG
Trigger: CCCCCTGTACCACGGCCGCCACCCGGCTTCCAGGCC...TTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp ACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAGCTCTGCCGCGGCTCTaGGCACGGAGGCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TAPMPQQAEIWPQTFDSKALPRL*ARRLWG
Trigger: GCCCCAGAGCCTCCGTGCCCAGAGCCGCGGCAGAGC...TTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACCATGGTCCTGGGCTCTaGGGGCCATTCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHHGPGL*GPFWPL
Trigger: AAGTGGCCAGAATGGCCCCCAGAGCCCAGGACCATG...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACGTCAAAGCCTGGGCATaGCCAGTGCTGAGACCCTCG +
Preference number: 4 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHVKAWA*PVLRPS
Trigger: CGAGGGTCTCAGCACTGGCCATGCCCAGGCTTTGAC...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCCAGCTGTCAAAGCCTaGGCATGGCCAGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMPAVKA*AWPVLR
Trigger: TCTCAGCACTGGCCATGCCCAGGCTTTGACAGCTGG...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR TCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCAAAAGGGAGGATCAGTaGGAGGCCCAGGCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASAKREDQ*EAQAPE
Trigger: CTCAGGGGCCTGGGCCTCTCACTGATCCTCCCTTTT...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCAGGCAGCAAAACTGCTaGCTGCTCCTGACGCCGATG +
Preference number: 4 (lower is better)
Translates to: DADGQASLTAPMPQQAEIRQQNC*LLLTPM
Trigger: CATCGGCGTCAGGAGCAGTCAGCAGTTTTGCTGCCT...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCCTCCCTGCCTGCCCCTaGGCACTTGTATTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTLPACP*ALVLVP
Trigger: TGGCACCAATACAAGTGCTCAGGGGCAGGCAGGGAG...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR GCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCGCCCCCTGCACCCCATaGCTATGTTCCAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASAAPCTP*LCSSFL
Trigger: CAGGAAGCTGGAACATAGGCATGGGGTGCAGGGGGC...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTGGGGCGGAAGGAGCCTaGTTAGGACTGCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTGAEGA*LGLLSA
Trigger: AGCTGAGAGCAGTCCTAAGCAGGCTCCTTCCGCCCC...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCGCCTCCTCCAGCAGCTaGTTCTTGAGCCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTASSSS*FLSHVQ
Trigger: CTGGACGTGGCTCAAGAAGCAGCTGCTGGAGGAGGC...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTGCTACCGGCCTCCTCTaGATGACGGGACTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PCPLGPGASSCSNYGPPAATGLL*MTGLQE
Trigger: TTCCTGCAGTCCCGTCATCCAGAGGAGGCCGGTAGC...AGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACGCCCACCCTGGTTTCTaGGCACCACGTGTTTGCAAG +
Preference number: 4 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHAHPGF*APRVCK
Trigger: CTTGCAAACACGTGGTGCCCAGAAACCAGGGTGGGC...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACCCCAAGTACACAGCCTaGGTCAGGCCGCAACACCGT +
Preference number: 4 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADPKYTA*VRPQHR
Trigger: ACGGTGTTGCGGCCTGACCCAGGCTGTGTACTTGGG...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCTGGGGCCAGGGGTGTaGAGGCCTGAGTATTCTGCT +
Preference number: 4 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWALGPGV*RPEYSA
Trigger: AGCAGAATACTCAGGCCTCCACACCCCTGGCCCCAG...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACCTGGGGCCAGGGGTGTaGAGGCCTGAGTATTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADLGPGV*RPEYSA
Trigger: AGCAGAATACTCAGGCCTCCACACCCCTGGCCCCAG...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTCCTCCCTCCTGAGGTaGGAGGCCTGTGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADSSLLR*EACVSC
Trigger: ACAGGAGACACAGGCCTCCCACCTCAGGAGGGAGGA...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCCTTCTTCTGTCGGTCCAGGGGTTCCCTaGAGGCTTGGGCCGCACACC +
Preference number: 4 (lower is better)
Translates to: SSCSNYGPPARASAPSSVGPGVP*RLGPHT
Trigger: GGTGTGCGGCCCAAGCCTCCAGGGAACCCCTGGACC...GACAGAAGAAGGGGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCAGGGGTGATGCCACGTaGTGGATGATGGGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWARGDAT*WMMGVC
Trigger: GCACACCCCCATCATCCACCACGTGGCATCACCCCT...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACCCCATTGTGTGGGGATaGTGCCAGCTGGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHPIVWG*CQLDVH
Trigger: GTGCACATCCAGCTGGCACCATCCCCACACAATGGG...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCGGCCTGGAAGCCGGGTaGCGGCCGTGGTACAGGGGG +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSGLEAG*RPWYRG
Trigger: CCCCCTGTACCACGGCCGCCACCCGGCTTCCAGGCC...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCGCTCTGCCGCGGCTCTaGGCACGGAGGCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSALPRL*ARRLWG
Trigger: GCCCCAGAGCCTCCGTGCCCAGAGCCGCGGCAGAGC...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACCTCTGGGGGCCATTCTaGCCACTTCACTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADLWGPF*PLHWSL
Trigger: GAGGCTCCAGTGAAGTGGCCAGAATGGCCCCCAGAG...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCTCCATCCCATGGTCCTaGGCTCTGGGGGCCATTCTG +
Preference number: 4 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWASIPWS*ALGAIL
Trigger: CAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGA...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTTCCATCCCATGGTCCTaGGCTCTGGGGGCCATTCTG +
Preference number: 4 (lower is better)
Translates to: PCPLGPGASSCSNYGPPASIPWS*ALGAIL
Trigger: CAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGA...AGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTTGTGTCCCTCTCCTGTaGTTGGCCACCCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTCVPLL*LATPTR
Trigger: TCTGGTGGGGGTGGCCAACCACAGGAGAGGGACACA...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR TCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCAGGCAGCAAAACTGCTaGCTGCTCCTGACGCCGATG +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTRQQNC*LLLTPM
Trigger: CATCGGCGTCAGGAGCAGTCAGCAGTTTTGCTGCCT...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTGAGAACGTGGACTTCTaGAGGGGTGATGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTENVDF*RGDATW
Trigger: CCACGTGGCATCACCCCTGCAGAAGTCCACGTTCTC...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCGGGGCAGGCACCTCCTaGTCTGTGGGGGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSGAGTS*SVGVGT
Trigger: GGTGCCCACCCCCACAGAGCAGGAGGTGCCTGCCCC...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCAGGCTGGCTGGGGTGTaGTCCCCACCGCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSRLAGV*SPPLGP
Trigger: AGGGCCCAGCGGTGGGGAGCACACCCCAGCCAGCCT...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGGATCTGGCTCTaGCATCAGGAAGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWAPRIWL*HQEAQA
Trigger: TGCCTGTGCTTCCTGATGGCAGAGCCAGATCCTGGG...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGGAAGGAGGGAGTCCTaGGGGCTGCCGCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HPCLSKQRSGPKPLTAKGGRRES*GLPLVG
Trigger: CCCCACCAGCGGCAGCCCCCAGGACTCCCTCCTTCC...ACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTAGAGGCTCTCTGGTTTaGGGAAGGAGGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTRGSLV*GRRESW
Trigger: CCAGGACTCCCTCCTTCCCCAAACCAGAGAGCCTCT...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGGCTCTCTGGTTTaGGGAAGGAGGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PCPLGPGASSCSNYGPPARGSLV*GRRESW
Trigger: CCAGGACTCCCTCCTTCCCCAAACCAGAGAGCCTCT...AGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCGAGCCAGAGGCTCTCTaGTTTGGGGAAGGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTEPEAL*FGEGGS
Trigger: ACTCCCTCCTTCCCCAAACCAGAGAGCCTCTGGCTC...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCCGCAGACCTCCTGTCTaGGGTGGCCCGGCCAAGCCG +
Preference number: 4 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPRRPPV*GGPAKP
Trigger: CGGCTTGGCCGGGCCACCCCAGACAGGAGGTCTGCG...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCCTTCTCTGTCCCGCTTGGCCAAGCTGTTCCCATAGGGTTGGGACTGAGGGCTAGGGGTGATGCCACGTaGTGGATGATGGGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PFSVPLGQAVPIGLGLRARGDAT*WMMGVC
Trigger: GCACACCCCCATCATCCACCACGTGGCATCACCCCT...AGCCCTCAGTCCCAACCCTATGGGAACAGCTTGGCCAAGCGGGACAGAGAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CCA 90 bp CCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTGGCCGATGGAGAACGTaGACTTCTGCAGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: PCPLGPGASSCSNYGPPAGRWRT*TSAGVM
Trigger: CATCACCCCTGCAGAAGTCCACGTTCTCCATCGGCC...AGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTGGCCGATGGAGAACGTaGACTTCTGCAGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTGRWRT*TSAGVM
Trigger: CATCACCCCTGCAGAAGTCCACGTTCTCCATCGGCC...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTGCTAGAATCCTGCGCTaGGTGAGGCCGATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTARILR*VRPMEN
Trigger: GTTCTCCATCGGCCTCACCCAGCGCAGGATTCTAGC...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCGCGGGTGAGGCTGGCTaGGGTGTGCTCCCCACCGCT +
Preference number: 4 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPAGEAG*GVLPTA
Trigger: AGCGGTGGGGAGCACACCCCAGCCAGCCTCACCCGC...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCCGGGTGAGCCCCAAGTaGCAGGCATGCCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSRVSPK*QACPWP
Trigger: TGGCCAGGGGCATGCCTGTCACTTGGGGCTCACCCG...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCGACCAGGCTGTGCGGTaGGGACTCCAGCGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPDQAVR*GLQRAA
Trigger: TGCCGCTCGCTGGAGTCCTCACCGCACAGCCTGGTC...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp TCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCCTTCTTCTGTCAGGCAAGAACAGAGCTaGTGGAGGGGTGGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: SSCSNYGPPARASAPSSVRQEQS*WRGGGG
Trigger: TCCGCCCCCACCCCTCCAGCAGCTCTGTTCTTGCCT...GACAGAAGAAGGGGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTGGGAGTCCTGGGGGCTaGCGCTGGTGGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPGSPGG*RWWGLA
Trigger: AGCCAGCCCCCACCAGCGGCAGCCCCCAGGACTCCC...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCGGCTGGAAGAGCGGCTaGCCCCAGACACGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPGWKSG*PQTREG
Trigger: CCCCTCACGTGTCTGGGGGCAGCCGCTCTTCCAGCC...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTCATCTTCTTCCGGGCTaGCTTCCTCAGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTHLLPG*LPQELL
Trigger: CAGAAGCTCCTGAGGAAGGCAGCCCGGAAGAAGATG...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCGTGGAGCGAGGTGTGTaGCTCCCATCATCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARAVERGV*LPSSSS
Trigger: GGAAGAAGATGATGGGAGGCACACACCTCGCTCCAC...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCTCTGGCTCCAGGCTCTaGCGCGGCTCTGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPSGSRL*RGSGHG
Trigger: TCCGTGCCCAGAGCCGCGGCAGAGCCTGGAGCCAGA...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp TCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCCTTCTTCTGTCCCTCCGCCACTGACATaGGGTACAGCACGGCATCCC +
Preference number: 4 (lower is better)
Translates to: SSCSNYGPPARASAPSSVPPPLT*GTARHP
Trigger: GGGATGCCGTGCTGTACCGCATGTCAGTGGCGGAGG...GACAGAAGAAGGGGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCCCTGGTGCATCTTCATaGAGCAACTATGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTPGASS*SNYGPP
Trigger: TGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGG...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTCCCCTTGGGCCCTGGTaGATCTTCATGCAGCAACTA +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTPLGPW*IFMQQL
Trigger: TAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGG...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCCCCCTTGGGCCCTGGTaGATCTTCATGCAGCAACTA +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTPLGPW*IFMQQL
Trigger: TAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGG...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACGAGCACTTGTATTGGTaGCAAGTCCCACGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADEHLYW*QVPRWL
Trigger: CAGCCAGCGTGGGACTTGGCACCAATACAAGTGCTC...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CCA 90 bp TCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCCTTCTTCTGTCCCAAGCCGCCCACCCTaGTTTCTGGGCACCACGTGT +
Preference number: 4 (lower is better)
Translates to: SSCSNYGPPARASAPSSVPSRPP*FLGTTC
Trigger: ACACGTGGTGCCCAGAAACCAGGGTGGGCGGCTTGG...GACAGAAGAAGGGGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCGGTCCAGGGGTTCCCTaGAGGCTTGGGCCGCACACC +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSGPGVP*RLGPHT
Trigger: GGTGTGCGGCCCAAGCCTCCAGGGAACCCCTGGACC...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCGCGGAAGGCCCTGGGTaGAGCGAGGTGTGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSAEGPG*SEVCAS
Trigger: GGAGGCACACACCTCGCTCCACCCAGGGCCTTCCGC...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCCTTCTTCTGTCGGGGCTGTGACCTCCTaGTCATGGCTGGCCTCACTC +
Preference number: 4 (lower is better)
Translates to: SSCSNYGPPARASAPSSVGAVTS*SWLASL
Trigger: GAGTGAGGCCAGCCATGACCAGGAGGTCACAGCCCC...GACAGAAGAAGGGGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GTCAGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCGCCGGGTGGCGGCCGTaGTACAGGGGGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VSRCSPLPSYLKFSSQGPAGWRP*YRGLLR
Trigger: CCTGAGGAGCCCCCTGTACCACGGCCGCCACCCGGC...GGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCTGGGCACGGAGGCTCTaGGGCCTCCTCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPWARRL*GLLQQL
Trigger: CAGCTGCTGGAGGAGGCCCCAGAGCCTCCGTGCCCA...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTGGGGGTGGGCACCTCTaGCTCCAGGCTCTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPGGGHL*LQALPR
Trigger: CCGCGGCAGAGCCTGGAGCCAGAGGTGCCCACCCCC...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACCAGCAAGCAGAGATCTaGCCCCAAACCTTTGACAGC +
Preference number: 4 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHQQAEI*PQTFDS
Trigger: GCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTG...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACCCTGAGCACTTGTATTaGTGCCAAGTCCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADPEHLY*CQVPRW
Trigger: CCAGCGTGGGACTTGGCACCAATACAAGTGCTCAGG...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CCA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCCTTCTCTGTCCCGCTTaGCCAAGCTGTTCCCATAGG +
Preference number: 4 (lower is better)
Translates to: PLGPGASSCSNYGPPARALLCPA*PSCSHR
Trigger: CCTATGGGAACAGCTTGGCCAAGCGGGACAGAGAAG...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CCA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCATTTATTAGTGACCTaGGCCCCAGGCTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMHLLVT*APGSIS
Trigger: GGAAATGGAGCCTGGGGCCCAGGTCACTAATAAATG...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR TCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCTTGGGCCTCCGCCACTaGCATGCGGTACAGCACGGC +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSLGLRH*HAVQHG
Trigger: GCCGTGCTGTACCGCATGTCAGTGGCGGAGGCCCAA...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCCTGGCCCCAAACCTTTaGCAGCAAAAGGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTLAPNL*QQKVTA
Trigger: TGCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAG...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp ACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAATGGGGACCAGGCTGTaGGGTGAGGACTCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: TAPMPQQAEIWPQTFDSKMGTRL*GEDSSE
Trigger: CTCGCTGGAGTCCTCACCGCACAGCCTGGTCCCCAT...TTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGCAGGTCCAGCCGGCTaGCACCCTCCATGTACCCAG +
Preference number: 4 (lower is better)
Translates to: HPCLSKQRSGPKPLTAKGAGPAG*HPPCTQ
Trigger: CTGGGTACATGGAGGGTGCCAGCCGGCTGGACCTGC...ACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp ACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAGGCGGCCAAGAGGCTTaGGAAAGCCGAGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: TAPMPQQAEIWPQTFDSKGGQEA*ESRGCI
Trigger: GATGCAGCCTCGGCTTTCCCAAGCCTCTTGGCCGCC...TTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGGGCCGGGTAGGTTCTaGGGCCGAGGCTACAACCTG +
Preference number: 4 (lower is better)
Translates to: HPCLSKQRSGPKPLTAKGGPGRF*GRGYNL
Trigger: CAGGTTGTAGCCTCGGCCCCAGAACCTACCCGGCCC...ACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp ACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAGGGGATGGTGCCAGCTaGATGTGCACCTGGGTGACG +
Preference number: 4 (lower is better)
Translates to: TAPMPQQAEIWPQTFDSKGDGAS*MCTWVT
Trigger: CGTCACCCAGGTGCACATCCAGCTGGCACCATCCCC...TTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GTCAGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCGGATGGAGCGGACTGTaGGAGGGGGCCGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: VSRCSPLPSYLKFSSQGPGWSGL*EGAGWP
Trigger: AGGCCACCCGGCCCCCTCCCACAGTCCGCTCCATCC...GGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CCCTTCTCTGTCCCGCTTGGCCAAGCTGTTCCCATAGGGTTGGGACTGAGGGCTATGCCCCTTGGGCCCTaGTGCATCTTCATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PFSVPLGQAVPIGLGLRAMPLGP*CIFMQQ
Trigger: TTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCAT...AGCCCTCAGTCCCAACCCTATGGGAACAGCTTGGCCAAGCGGGACAGAGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CCA 90 bp ACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAATCCCTCTCCTGTGGTTaGCCACCCCCACCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: TAPMPQQAEIWPQTFDSKSLSCG*PPPPEP
Trigger: AGGCTCTGGTGGGGGTGGCCAACCACAGGAGAGGGA...TTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR TCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCTCCAGCCAGAGGTCCTaGCCCAGGGCACAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSSSQRS*PRAQVL
Trigger: GAGCACTTGTGCCCTGGGTCAGGACCTCTGGCTGGA...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp ACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAGGGGCCCCATGGCCCTaGATTGAGCAGCTAGAATCC +
Preference number: 4 (lower is better)
Translates to: TAPMPQQAEIWPQTFDSKGAPWP*IEQLES
Trigger: GGATTCTAGCTGCTCAATTCAGGGCCATGGGGCCCC...TTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp AGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATGGATGTGCACCTGGGTaGCGTGGGTGCCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: SRCSPLPSYLKFSSQGPHGCAPG*RGCPHP
Trigger: GGGGTGGGGGCACCCACGTCACCCAGGTGCACATCC...ATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTAGCCTCTCTGGGCACTaGGGCCTGGAAGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPSLSGH*GLEAGW
Trigger: CCACCCGGCTTCCAGGCCTCAGTGCCCAGAGAGGCT...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTGACCAGGCTGTGCGGTaGGGACTCCAGCGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPDQAVR*GLQRAA
Trigger: TGCCGCTCGCTGGAGTCCTCACCGCACAGCCTGGTC...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCCAGTCGCTGTGCGGTTaGAGTTCTTGGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSQSLCG*SSWAGG
Trigger: GCCCCCAGCCCAAGAACTTCAACCGCACAGCGACTG...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCACTGCTGACTGCTCCTaGCGCCGATGGCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPTADCS*RRWPSQ
Trigger: CTGGCTTGGCCATCGGCGTCAGGAGCAGTCAGCAGT...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp AGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCAGGGTGGGCAGGCTaGTTGGCAGGCAGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SRCSPLPSYLKFSSQGPHPGWAG*LAGRPP
Trigger: AGGCGGCCTGCCTGCCAAGCAGCCTGCCCACCCTGG...ATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTAGGCAAGAACAGAGCTaGTGGAGGGGTGGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: HPCLSKQRSGPKPLTAKGRQEQS*WRGGGG
Trigger: TCCGCCCCCACCCCTCCAGCAGCTCTGTTCTTGCCT...ACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCTGGGAAAGCCGAGGCTaGATCATCAGAGGTAGATTG +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASAWESRG*IIRGRL
Trigger: CAATCTACCTCTGATGATGCAGCCTCGGCTTTCCCA...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTGGCTGGAAGAGCGGCTaGCCCCAGACACGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPGWKSG*PQTREG
Trigger: CCCCTCACGTGTCTGGGGGCAGCCGCTCTTCCAGCC...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCGCCGCACACCTCGGGTaGCATCGACGCAGCCGATAT +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSAAHLG*HRRSRY
Trigger: ATATCGGCTGCGTCGATGGCACCCGAGGTGTGCGGC...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTTCCTCAGGAGCTTCTaGAAACGCAAGTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: DADGQASLTAPMPQQAEIFLRSF*KRKLSF
Trigger: GAAGGACAACTTGCGTTTGCAGAAGCTCCTGAGGAA...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GTCAGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCTCTGGCTCCAGGCTCTaGCGCGGCTCTGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: VSRCSPLPSYLKFSSQGPSGSRL*RGSGHG
Trigger: TCCGTGCCCAGAGCCGCGGCAGAGCCTGGAGCCAGA...GGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCCCTCCGCCACTGACATaGGGTACAGCACGGCATCCC +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSPPPLT*GTARHP
Trigger: GGGATGCCGTGCTGTACCGCATGTCAGTGGCGGAGG...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCTTCCCCTCACACCACTaGAGCCCAGGGGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPFPSHH*SPGAPA
Trigger: AGCTGGAGCCCCTGGGCTGCAGTGGTGTGAGGGGAA...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCCTGAGCTATGCTAAATaGGATATTCCCGCAGACCTC +
Preference number: 4 (lower is better)
Translates to: DADGQASLTAPMPQQAEILSYAK*DIPADL
Trigger: GAGGTCTGCGGGAATATCCCATTTAGCATAGCTCAG...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCGGCGGCCAAGAGGCTTaGGAAAGCCGAGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSGGQEA*ESRGCI
Trigger: GATGCAGCCTCGGCTTTCCCAAGCCTCTTGGCCGCC...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GTCAGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCGGCCGCAACACCGTGTaGGCTGGGGTGGGAGACGGA +
Preference number: 4 (lower is better)
Translates to: VSRCSPLPSYLKFSSQGPGRNTV*AGVGDG
Trigger: TCCGTCTCCCACCCCAGCCCACACGGTGTTGCGGCC...GGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCCTTCTTCTGTCCCCATTGTGTGGGGATaGTGCCAGCTGGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: SSCSNYGPPARASAPSSVPIVWG*CQLDVH
Trigger: GTGCACATCCAGCTGGCACCATCCCCACACAATGGG...GACAGAAGAAGGGGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCCTTCTTCTGTCCTCCATCCTGGCTGTTaGATCCCACTTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSCSNYGPPARASAPSSVLHPGC*IPLLGL
Trigger: CAGCCCCAGAAGTGGGATCCAACAGCCAGGATGGAG...GACAGAAGAAGGGGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACTGTGGTGGGCAGTaGGCGGATGTGAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: HPCLSKQRSGPKPLTAKGDCGGQ*ADVSHW
Trigger: CCAGTGGCTCACATCCGCCCACTGCCCACCACAGTC...ACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTCTCTGCCAGGGCCCATaGGGACCAGGCTGTGCGGTG +
Preference number: 4 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPLCQGP*GPGCAV
Trigger: CACCGCACAGCCTGGTCCCCATGGGCCCTGGCAGAG...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp ACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAGCACCCCATGCCCCTTaGGCCCTGGTGCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: TAPMPQQAEIWPQTFDSKAPHAP*ALVHLH
Trigger: ATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGC...TTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp ACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAACCCATGGCCCTGAATTaGGCAGCTAGAATCCTGCGC +
Preference number: 4 (lower is better)
Translates to: TAPMPQQAEIWPQTFDSKPMALN*AARILR
Trigger: GCGCAGGATTCTAGCTGCTCAATTCAGGGCCATGGG...TTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp AGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATAGCCTCTCTGGGCACTaGGGCCTGGAAGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SRCSPLPSYLKFSSQGPHSLSGH*GLEAGW
Trigger: CCACCCGGCTTCCAGGCCTCAGTGCCCAGAGAGGCT...ATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp GTCAGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCGCAGCTTCCGGGCGTTaGAGCGAGGCCGGTACAGGA +
Preference number: 4 (lower is better)
Translates to: VSRCSPLPSYLKFSSQGPAASGR*SEAGTG
Trigger: TCCTGTACCGGCCTCGCTTCAACGCCCGGAAGCTGC...GGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTTGGGCACCACGTGTTTaGAAGGACATTGACAAATGG +
Preference number: 4 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTWAPRV*KDIDKW
Trigger: CCATTTGTCAATGTCCTTGCAAACACGTGGTGCCCA...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCTTCCTCAGGAGCTTCTaGAAACGCAAGTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GPGASSCSNYGPPARASAFLRSF*KRKLSF
Trigger: GAAGGACAACTTGCGTTTGCAGAAGCTCCTGAGGAA...GGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCCTCTGGGGGCCATTCTaGCCACTTCACTGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSLWGPF*PLHWSL
Trigger: GAGGCTCCAGTGAAGTGGCCAGAATGGCCCCCAGAG...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCCATGGTCCTGGGCTCTaGGGGCCATTCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSHGPGL*GPFWPL
Trigger: AAGTGGCCAGAATGGCCCCCAGAGCCCAGGACCATG...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGCACCCCATGCCCCTTaGGCCCTGGTGCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: HPCLSKQRSGPKPLTAKGAPHAP*ALVHLH
Trigger: ATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGC...ACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp CACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTAGGGGTGTGGAGGCCTaGGTATTCTGCTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: HPCLSKQRSGPKPLTAKGRGVEA*VFCFLS
Trigger: GCTCAGGAAGCAGAATACTCAGGCCTCCACACCCCT...ACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCGGACTTCTGCAGGGGTaGTGCCACGTGGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPGLLQG*CHVVDD
Trigger: ATCATCCACCACGTGGCATCACCCCTGCAGAAGTCC...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTGAGCCGGGGCTTGGGTaGAACTTTGGGGACAGGGCA +
Preference number: 4 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPEPGLG*NFGDRA
Trigger: TGCCCTGTCCCCAAAGTTGCACCCAAGCCCCGGCTC...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCCCCAGGATCTGGCTCTaGCATCAGGAAGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPPRIWL*HQEAQA
Trigger: TGCCTGTGCTTCCTGATGGCAGAGCCAGATCCTGGG...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GTCAGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCCTCCTGGTCATGGCTaGCCTCACTCACGGGGGACA +
Preference number: 4 (lower is better)
Translates to: VSRCSPLPSYLKFSSQGPPPGHG*PHSRGT
Trigger: TGTCCCCCGTGAGTGAGGCCAGCCATGACCAGGAGG...GGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACTGAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTGTGACCTCCTGGTCATaGCTGGCCTCACTCACGGGG +
Preference number: 4 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPVTSWS*LASLTG
Trigger: CCCCGTGAGTGAGGCCAGCCATGACCAGGAGGTCAC...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGCTTGGGTGCAACTTTaGGGACAGGGCATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: HPCLSKQRSGPKPLTAKGAWVQL*GQGMGE
Trigger: CTCACCCATGCCCTGTCCCCAAAGTTGCACCCAAGC...ACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp AGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATAGACGGAGACGCGGGTaGGCCCCAAGTGACAGGCAT +
Preference number: 4 (lower is better)
Translates to: SRCSPLPSYLKFSSQGPHRRRRG*APSDRH
Trigger: ATGCCTGTCACTTGGGGCTCACCCGCGTCTCCGTCT...ATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTGGGGCCCCATGGCCCTaGATTGAGCAGCTAGAATCC +
Preference number: 4 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPGAPWP*IEQLES
Trigger: GGATTCTAGCTGCTCAATTCAGGGCCATGGGGCCCC...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCCATCTTCTTCCGGGCTaGCTTCCTCAGGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSHLLPG*LPQELL
Trigger: CAGAAGCTCCTGAGGAAGGCAGCCCGGAAGAAGATG...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCGTGGAGCGAGGTGTGTaGCTCCCATCATCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPVERGV*LPSSSS
Trigger: GGAAGAAGATGATGGGAGGCACACACCTCGCTCCAC...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCTTGAAGTTCTTGGGCTaGGGGCTCAGCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPLKFLG*GLSSRM
Trigger: CATCCTGGAGCTGAGCCCCCAGCCCAAGAACTTCAA...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp ACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAGGCAGAGGCTTTTTCTaGTACCTCTGTGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: TAPMPQQAEIWPQTFDSKGRGFF*YLCVPL
Trigger: GAGAGGGACACAGAGGTACCAGAAAAAGCCTCTGCC...TTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR GCA 90 bp ACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAATGGGAAAGCCGAGGCTaGATCATCAGAGGTAGATTG +
Preference number: 4 (lower is better)
Translates to: TAPMPQQAEIWPQTFDSKWESRG*IIRGRL
Trigger: CAATCTACCTCTGATGATGCAGCCTCGGCTTTCCCA...TTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GTCAGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCGAGAACGTGGACTTCTaGAGGGGTGATGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: VSRCSPLPSYLKFSSQGPENVDF*RGDATW
Trigger: CCACGTGGCATCACCCCTGCAGAAGTCCACGTTCTC...GGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTGCCCACCCTGGTTTCTaGGCACCACGTGTTTGCAAG +
Preference number: 4 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPAHPGF*APRVCK
Trigger: CTTGCAAACACGTGGTGCCCAGAAACCAGGGTGGGC...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GTCAGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCGCTAGAATCCTGCGCTaGGTGAGGCCGATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: VSRCSPLPSYLKFSSQGPARILR*VRPMEN
Trigger: GTTCTCCATCGGCCTCACCCAGCGCAGGATTCTAGC...GGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTCTCCATCCTGGCTGTTaGATCCCACTTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPLHPGC*IPLLGL
Trigger: CAGCCCCAGAAGTGGGATCCAACAGCCAGGATGGAG...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp CACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTCAGCAAGCAGAGATCTaGCCCCAAACCTTTGACAGC +
Preference number: 4 (lower is better)
Translates to: HPCLSKQRSGPKPLTAKGQQAEI*PQTFDS
Trigger: GCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTG...ACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp AGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATAGGGGTGTGGAGGCCTaGGTATTCTGCTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SRCSPLPSYLKFSSQGPHRGVEA*VFCFLS
Trigger: GCTCAGGAAGCAGAATACTCAGGCCTCCACACCCCT...ATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp AGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCCATGGCCCTGAATTaGGCAGCTAGAATCCTGCGC +
Preference number: 4 (lower is better)
Translates to: SRCSPLPSYLKFSSQGPHPMALN*AARILR
Trigger: GCGCAGGATTCTAGCTGCTCAATTCAGGGCCATGGG...ATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GTCAGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCCTGGTGCATCTTCATaGAGCAACTATGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VSRCSPLPSYLKFSSQGPPGASS*SNYGPP
Trigger: TGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGG...GGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACTGAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp AGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATGCTTGGGTGCAACTTTaGGGACAGGGCATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SRCSPLPSYLKFSSQGPHAWVQL*GQGMGE
Trigger: CTCACCCATGCCCTGTCCCCAAAGTTGCACCCAAGC...ATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTCTGGCCCCAAACCTTTaGCAGCAAAAGGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPLAPNL*QQKVTA
Trigger: TGCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAG...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp AGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATATGCCCCTTGGGCCCTaGTGCATCTTCATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: SRCSPLPSYLKFSSQGPHMPLGP*CIFMQQ
Trigger: TTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCAT...ATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR TCA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCTTTGACAGCAAAAGGTaGCAGCAAAAGGGAGGATCA +
Preference number: 4 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPFDSKR*QQKGGS
Trigger: TGATCCTCCCTTTTGCTGTCACCTTTTGCTGTCAAA...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR GCA 90 bp GTCAGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCTGGGCACCACGTGTTTaGAAGGACATTGACAAATGG +
Preference number: 4 (lower is better)
Translates to: VSRCSPLPSYLKFSSQGPWAPRV*KDIDKW
Trigger: CCATTTGTCAATGTCCTTGCAAACACGTGGTGCCCA...GGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CCA 90 bp GTCAGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCTGAGCTATGCTAAATaGGATATTCCCGCAGACCTC +
Preference number: 4 (lower is better)
Translates to: VSRCSPLPSYLKFSSQGPLSYAK*DIPADL
Trigger: GAGGTCTGCGGGAATATCCCATTTAGCATAGCTCAG...GGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS GCA 90 bp GGCACCTCCTGCTCTGTGGGGGTGGGCACCTCTGGCTCCAGGCTCTaGCGCGGCTCTGGGCACGGAGGCTCTGGGGCCTCCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GTSCSVGVGTSGSRL*RGSGHGGSGASSSS
Trigger: GCTGCTGGAGGAGGCCCCAGAGCCTCCGTGCCCAGAGCCGCGGCAGAGCCTGGAGCCAGAGGTGCCCACCCCCACAGAGCAGGAGGTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS TCA 90 bp TGCTGGCCAAGCCCAGGGCTGGAAGAGCGGCTGCCCCCAGACACGTaGGGGGCGCCCTGTTGTCGCCGGCTCAACCACAGGCGCGTCCGC +
Preference number: 5 (lower is better)
Translates to: CWPSPGLEERLPPDT*GAPCCRRLNHRRVR
Trigger: GCGGACGCGCCTGTGGTTGAGCCGGCGACAACAGGGCGCCCCTCACGTGTCTGGGGGCAGCCGCTCTTCCAGCCCTGGGCTTGGCCAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 90 bp GGGTGCGGGCCCTCAGCAGCGTGCGGGGCTGTGACCTCCTGGTCATaGCTGGCCTCACTCACGGGGGACAGGGAGGTGCGGAAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: GCGPSAACGAVTSWS*LASLTGDREVRKAL
Trigger: CAGGGCCTTCCGCACCTCCCTGTCCCCCGTGAGTGAGGCCAGCCATGACCAGGAGGTCACAGCCCCGCACGCTGCTGAGGGCCCGCACCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS GCA 90 bp GGCTCCTCCAGGTGCTCTCTGCCAGGGCCCATGGGGACCAGGCTGTaGGGTGAGGACTCCAGCGAGCGGCAGGTCGGGGCTATGGGCACC +
Preference number: 5 (lower is better)
Translates to: GSSRCSLPGPMGTRL*GEDSSERQVGAMGT
Trigger: GGTGCCCATAGCCCCGACCTGCCGCTCGCTGGAGTCCTCACCGCACAGCCTGGTCCCCATGGGCCCTGGCAGAGAGCACCTGGAGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 90 bp CTGGCTGGGGTGTGCTCCCCACCGCTGGGCCCTGCCAGGCGCCCTTaGGCCTCCGCCACTGACATGCGGTACAGCACGGCATCCCACATC +
Preference number: 5 (lower is better)
Translates to: LAGVCSPPLGPARRP*ASATDMRYSTASHI
Trigger: GATGTGGGATGCCGTGCTGTACCGCATGTCAGTGGCGGAGGCCCAAGGGCGCCTGGCAGGGCCCAGCGGTGGGGAGCACACCCCAGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS TCA 90 bp CGGGGCTATGGGCACCACAACCCTGGCACTAGCCTCTCTGGGCACTaGGGCCTGGAAGCCGGGTGGCGGCCGTGGTACAGGGGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RGYGHHNPGTSLSGH*GLEAGWRPWYRGLL
Trigger: GAGGAGCCCCCTGTACCACGGCCGCCACCCGGCTTCCAGGCCTCAGTGCCCAGAGAGGCTAGTGCCAGGGTTGTGGTGCCCATAGCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS GCA 90 bp TGCCGCGGCTCTGGGCACGGAGGCTCTGGGGCCTCCTCCAGCAGCTaGTTCTTGAGCCACGTCCAGCCACTGAGCCGGGGCTTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: CRGSGHGGSGASSSS*FLSHVQPLSRGLGA
Trigger: TGCACCCAAGCCCCGGCTCAGTGGCTGGACGTGGCTCAAGAAGCAGCTGCTGGAGGAGGCCCCAGAGCCTCCGTGCCCAGAGCCGCGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 90 bp CAGGGCAGGGAGGCCAGCAGAGAGAGGCTCGGGGAGCAGGCTCTGTaGGCTTGCAGGAGGCAGGTCTGTGGCCCCTCCCTGGACCCTAGC +
Preference number: 5 (lower is better)
Translates to: QGREASRERLGEQAL*ACRRQVCGPSLDPS
Trigger: GCTAGGGTCCAGGGAGGGGCCACAGACCTGCCTCCTGCAAGCCCACAGAGCCTGCTCCCCGAGCCTCTCTCTGCTGGCCTCCCTGCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS TCA 90 bp GTTGTCGCCGGCTCAACCACAGGCGCGTCCGCTGCGAGCCAGCGGTaGGGGGTGGCGGCCAAGAGGCTTGGGAAAGCCGAGGCTGCATCA +
Preference number: 5 (lower is better)
Translates to: VVAGSTTGASAASQR*GVAAKRLGKAEAAS
Trigger: TGATGCAGCCTCGGCTTTCCCAAGCCTCTTGGCCGCCACCCCTCACCGCTGGCTCGCAGCGGACGCGCCTGTGGTTGAGCCGGCGACAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS TCA 90 bp CTCCAGGTGCTCTCTGCCAGGGCCCATGGGGACCAGGCTGTGCGGTaGGGACTCCAGCGAGCGGCAGGTCGGGGCTATGGGCACCACAAC +
Preference number: 5 (lower is better)
Translates to: LQVLSARAHGDQAVR*GLQRAAGRGYGHHN
Trigger: GTTGTGGTGCCCATAGCCCCGACCTGCCGCTCGCTGGAGTCCTCACCGCACAGCCTGGTCCCCATGGGCCCTGGCAGAGAGCACCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 90 bp GTGGTACAGGGGGCTCCTCAGGCAAGGGACTGGCAGCCTGGACTGTaGTGGGCAGTGGGCGGATGTGAGCCACTGGGACCAGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: VVQGAPQARDWQPGL*WAVGGCEPLGPGAG
Trigger: CCCAGCCCCTGGTCCCAGTGGCTCACATCCGCCCACTGCCCACCACAGTCCAGGCTGCCAGTCCCTTGCCTGAGGAGCCCCCTGTACCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGGGGTTCCCTGGAGGCTaGGGCCGCACACCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMGFPGG*GRTPRV
Trigger: CACCCGAGGTGTGCGGCCCAAGCCTCCAGGGAACCC...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 90 bp ATGGGCACCACAACCCTGGCACTAGCCTCTCTGGGCACTGAGGCCTaGAAGCCGGGTGGCGGCCGTGGTACAGGGGGCTCCTCAGGCAAG +
Preference number: 5 (lower is better)
Translates to: MGTTTLALASLGTEA*KPGGGRGTGGSSGK
Trigger: CTTGCCTGAGGAGCCCCCTGTACCACGGCCGCCACCCGGCTTCCAGGCCTCAGTGCCCAGAGAGGCTAGTGCCAGGGTTGTGGTGCCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGGTCCCTCTCCTGTGGTaGGCCACCCCCACCAGAGCC +
Preference number: 5 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMVPLLW*ATPTRA
Trigger: GGCTCTGGTGGGGGTGGCCAACCACAGGAGAGGGAC...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CAA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCGGGTTCCCTGGAGGCTaGGGCCGCACACCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWAGFPGG*GRTPRV
Trigger: CACCCGAGGTGTGCGGCCCAAGCCTCCAGGGAACCC...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS GCA 90 bp TGGGGGTCCAGGGGTTCCCTGGAGGCTTGGGCCGCACACCTCGGGTaGCATCGACGCAGCCGATATGAGCATGACTGTGTCCTAGGGTGG +
Preference number: 5 (lower is better)
Translates to: WGSRGSLEAWAAHLG*HRRSRYEHDCVLGW
Trigger: CCACCCTAGGACACAGTCATGCTCATATCGGCTGCGTCGATGGCACCCGAGGTGTGCGGCCCAAGCCTCCAGGGAACCCCTGGACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp CCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTGTGAGGGGCGCCCTGTaGTCGCCGGCTCAACCACAG +
Preference number: 5 (lower is better)
Translates to: PCPLGPGASSCSNYGPPAVRGAL*SPAQPQ
Trigger: CTGTGGTTGAGCCGGCGACAACAGGGCGCCCCTCAC...AGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 90 bp CCCATGCCTATGTTCCAGCTTCCTGGGTCTGCAGGTCCAGCCGGCTaGCACCCTCCATGTACCCAGGGGAGATTCCAGCCAGACACCCGC +
Preference number: 5 (lower is better)
Translates to: PMPMFQLPGSAGPAG*HPPCTQGRFQPDTR
Trigger: GCGGGTGTCTGGCTGGAATCTCCCCTGGGTACATGGAGGGTGCCAGCCGGCTGGACCTGCAGACCCAGGAAGCTGGAACATAGGCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCGCAGGCTCTGTGGGCTaGCAGGAGGCAGGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTAGSVG*QEAGLW
Trigger: CCACAGACCTGCCTCCTGCAAGCCCACAGAGCCTGC...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp TCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCCTTCTTCTGTCGGGTGGGCAGGCTGCTaGGCAGGCAGGCCGCCTTCC +
Preference number: 5 (lower is better)
Translates to: SSCSNYGPPARASAPSSVGWAGC*AGRPPS
Trigger: GGAAGGCGGCCTGCCTGCCAAGCAGCCTGCCCACCC...GACAGAAGAAGGGGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp CTGCACCCCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCGGCTCAGGGGTCCCATaGTGTGGGGATGGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: LHPMPLGPWCIFMQQLWAGSGVP*CGDGAS
Trigger: GCTGGCACCATCCCCACACAATGGGACCCCTGAGCC...GGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACGGCTCAGGGGTCCCATaGTGTGGGGATGGTGCCAGC +
Preference number: 5 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADGSGVP*CGDGAS
Trigger: GCTGGCACCATCCCCACACAATGGGACCCCTGAGCC...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp TCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTGCAGCTTCCGGGCGTaGAAGCGAGGCCGGTACAGG +
Preference number: 5 (lower is better)
Translates to: SSSSSLPRPPDHPPNHADCSFRA*KRGRYR
Trigger: CCTGTACCGGCCTCGCTTCAACGCCCGGAAGCTGCA...GTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp GCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACTGCACCCCATGCCCCTaGGGCCCTGGTGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: APSSVHPMVLGSGGHSGHCTPCP*GPGASS
Trigger: TGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCA...GTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGCACCCCATGCCCCTaGGGCCCTGGTGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: DADGQASLTAPMPQQAEICTPCP*GPGASS
Trigger: TGAAGATGCACCAGGGCCCAAGGGGCATGGGGTGCA...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 90 bp CCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTGGCCACTTCACTaGAGCCTCCAGCCAGTCGCTGTGCGGTTGAAGTTCTTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PSHGPGLWGPFWPLH*SLQPVAVRLKFLGW
Trigger: CCAGCCCAAGAACTTCAACCGCACAGCGACTGGCTGGAGGCTCCAGTGAAGTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp GTCAAAGCCTGGGCATGGCCAGTGCTGAGACCCTCGCTGTCCCACCAGCGAATCTGGCGGCCAAGAGGCTaGGGAAAGCCGAGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: VKAWAWPVLRPSLSHQRIWRPRG*GKPRLH
Trigger: ATGCAGCCTCGGCTTTCCCAAGCCTCTTGGCCGCCA...GATTCGCTGGTGGGACAGCGAGGGTCTCAGCACTGGCCATGCCCAGGCTTTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CAA 90 bp CCCTTCTCTGTCCCGCTTGGCCAAGCTGTTCCCATAGGGTTGGGACTGAGGGCTGAGCTCGACTGTGCCTaGGGGACTTTGGGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PFSVPLGQAVPIGLGLRAELDCA*GTLGWP
Trigger: GGGCCACCCCAAAGTCCCCAAGGCACAGTCGAGCTC...AGCCCTCAGTCCCAACCCTATGGGAACAGCTTGGCCAAGCGGGACAGAGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CAA 90 bp CCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCCCACTGAGCCGGGGCTaGGGTGCAACTTTGGGGACA +
Preference number: 5 (lower is better)
Translates to: PLGPGASSCSNYGPPARAPLSRG*GATLGT
Trigger: TGTCCCCAAAGTTGCACCCAAGCCCCGGCTCAGTGG...GGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTCCAGTCGCTGTGCGGTaGAAGTTCTTGGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTPVAVR*KFLGWG
Trigger: CCCCCAGCCCAAGAACTTCAACCGCACAGCGACTGG...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 90 bp CCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTGGGGGCCATTCTaGCCACTTCACTGGAGCCTCCAGCCAGTCGCTGTGCGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: PFFCPSHGPGLWGPF*PLHWSLQPVAVRLK
Trigger: CTTCAACCGCACAGCGACTGGCTGGAGGCTCCAGTGAAGTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp GGGGCTCCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGGCCCTGGCTAAGAAGTaGCTTCCTGTTGCCAGCATG +
Preference number: 5 (lower is better)
Translates to: GAPARPLCPVHLTTLLTMALAKK*LPVASM
Trigger: CATGCTGGCAACAGGAAGCAACTTCTTAGCCAGGGC...CATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTTCCAGCAGCTGCTTCTaGAGCCACGTCCAGCCACTG +
Preference number: 5 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTSSSCF*SHVQPL
Trigger: CAGTGGCTGGACGTGGCTCAAGAAGCAGCTGCTGGA...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTCCAGCAGCTGCTTCTaGAGCCACGTCCAGCCACTG +
Preference number: 5 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTSSSCF*SHVQPL
Trigger: CAGTGGCTGGACGTGGCTCAAGAAGCAGCTGCTGGA...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCCCTGCCCCTGAGCACTaGTATTGGTGCCAAGTCCCA +
Preference number: 5 (lower is better)
Translates to: DADGQASLTAPMPQQAEIPAPEH*YWCQVP
Trigger: TGGGACTTGGCACCAATACAAGTGCTCAGGGGCAGG...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CAA 90 bp GACGCCGATGGCCAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCGCCCTGGCTAAGAAGTaGCTTCCTGTTGCCAGCATG +
Preference number: 5 (lower is better)
Translates to: DADGQASLTAPMPQQAEIALAKK*LPVASM
Trigger: CATGCTGGCAACAGGAAGCAACTTCTTAGCCAGGGC...GATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTGGCCATCGGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTTCTCCATCCTGGCTGTaGGATCCCACTTCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTSPSWL*DPTSGA
Trigger: AGCCCCAGAAGTGGGATCCAACAGCCAGGATGGAGA...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS GCA 90 bp CCTGGGTGGAGCGAGGTGTGTGCCTCCCATCATCTTCTTCCGGGCTaGCTTCCTCAGGAGCTTCTGCAAACGCAAGTTGTCCTTCCCTGG +
Preference number: 5 (lower is better)
Translates to: PGWSEVCASHHLLPG*LPQELLQTQVVLPW
Trigger: CCAGGGAAGGACAACTTGCGTTTGCAGAAGCTCCTGAGGAAGGCAGCCCGGAAGAAGATGATGGGAGGCACACACCTCGCTCCACCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp CCAGCTCGTCCTCTCTGCCCCGTCCACCTGACCACCCTCCTAACCATGCAGACTTTCTGCAAACGCAAGTaGTCCTTCCCTGGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: PARPLCPVHLTTLLTMQTFCKRK*SFPGLG
Trigger: GCCCAAGCCAGGGAAGGACAACTTGCGTTTGCAGAA...AGTCTGCATGGTTAGGAGGGTGGTCAGGTGGACGGGGCAGAGAGGACGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp CCCTTCTCTGTCCCGCTTGGCCAAGCTGTTCCCATAGGGTTGGGACTGAGGGCTTCTCCATCCTGGCTGTaGGATCCCACTTCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: PFSVPLGQAVPIGLGLRASPSWL*DPTSGA
Trigger: AGCCCCAGAAGTGGGATCCAACAGCCAGGATGGAGA...AGCCCTCAGTCCCAACCCTATGGGAACAGCTTGGCCAAGCGGGACAGAGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640310.2
CDS-3UTR CAA 90 bp TCTTCATGCAGCAACTATGGGCCCCCAGCTAGAGCCTCAGCCCCTTCTTCTGTCCCAGTCGCTGTGCGGTaGAAGTTCTTGGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: SSCSNYGPPARASAPSSVPVAVR*KFLGWG
Trigger: CCCCCAGCCCAAGAACTTCAACCGCACAGCGACTGG...GACAGAAGAAGGGGCTGAGGCTCTAGCTGGGGGCCCATAGTTGCTGCATGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp TGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTGACAGCGCAGGCTCTGTGGGCTaGCAGGAGGCAGGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: CLSKQRSGPKPLTAKGDSAGSVG*QEAGLW
Trigger: CCACAGACCTGCCTCCTGCAAGCCCACAGAGCCTGC...GCTGTCACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp CACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTTGCAGCTTCCGGGCGTaGAAGCGAGGCCGGTACAGG +
Preference number: 5 (lower is better)
Translates to: HPCLSKQRSGPKPLTAKGCSFRA*KRGRYR
Trigger: CCTGTACCGGCCTCGCTTCAACGCCCGGAAGCTGCA...ACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS TCA 90 bp AGCCGCCCACCCTGGTTTCTGGGCACCACGTGTTTGCAAGGACATTaGCAAATGGCATCTGTCCGAGCCAGAGGCTCTCTGGTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: SRPPWFLGTTCLQGH*QMASVRARGSLVWG
Trigger: TCCCCAAACCAGAGAGCCTCTGGCTCGGACAGATGCCATTTGTCAATGTCCTTGCAAACACGTGGTGCCCAGAAACCAGGGTGGGCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp CACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTTGGCGGCCAAGAGGCTaGGGAAAGCCGAGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: HPCLSKQRSGPKPLTAKGWRPRG*GKPRLH
Trigger: ATGCAGCCTCGGCTTTCCCAAGCCTCTTGGCCGCCA...ACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp GTCAGTAGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCGTGAGGGGCGCCCTGTaGTCGCCGGCTCAACCACAG +
Preference number: 5 (lower is better)
Translates to: VSRCSPLPSYLKFSSQGPVRGAL*SPAQPQ
Trigger: CTGTGGTTGAGCCGGCGACAACAGGGCGCCCCTCAC...GGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCTACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp TCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTACATCCCGACGCAGACCCCCACTGAGCCGGGGCTaGGGTGCAACTTTGGGGACA +
Preference number: 5 (lower is better)
Translates to: SYLKFSSQGPHPTSRRRPPLSRG*GATLGT
Trigger: TGTCCCCAAAGTTGCACCCAAGCCCCGGCTCAGTGG...GGGTCTGCGTCGGGATGTAGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 90 bp CACCCTGGTTTCTGGGCACCACGTGTTTGCAAGGACATTGACAAATaGCATCTGTCCGAGCCAGAGGCTCTCTGGTTTGGGGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: HPGFWAPRVCKDIDK*HLSEPEALWFGEGG
Trigger: CCCTCCTTCCCCAAACCAGAGAGCCTCTGGCTCGGACAGATGCCATTTGTCAATGTCCTTGCAAACACGTGGTGCCCAGAAACCAGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp CCATGCCCCTTGGGCCCTGGTGCATCTTCATGCAGCAACTATGGGCCCCCAGCTGTGTTTGCAAGGACATaGACAAATGGCATCTGTCCG +
Preference number: 5 (lower is better)
Translates to: PCPLGPGASSCSNYGPPAVFART*TNGICP
Trigger: CGGACAGATGCCATTTGTCAATGTCCTTGCAAACAC...AGCTGGGGGCCCATAGTTGCTGCATGAAGATGCACCAGGGCCCAAGGGGCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp CAAGCCAGCCTGACCGCACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCGTGTTTGCAAGGACATaGACAAATGGCATCTGTCCG +
Preference number: 5 (lower is better)
Translates to: QASLTAPMPQQAEIWPQTVFART*TNGICP
Trigger: CGGACAGATGCCATTTGTCAATGTCCTTGCAAACAC...GGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTGCGGTCAGGCTGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp AGATGCAGTCCTCTGCCATCTTACCTAAAGTTTTCATCCCAAGGCCCCCATCCTGAGCTCGACTGTGCCTaGGGGACTTTGGGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: RCSPLPSYLKFSSQGPHPELDCA*GTLGWP
Trigger: GGGCCACCCCAAAGTCCCCAAGGCACAGTCGAGCTC...AGGATGGGGGCCTTGGGATGAAAACTTTAGGTAAGATGGCAGAGGACTGCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS-3UTR CAA 90 bp CACCCATGCCTCAGCAAGCAGAGATCTGGCCCCAAACCTTTGACAGCAAAAGGTTTCTGCAAACGCAAGTaGTCCTTCCCTGGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: HPCLSKQRSGPKPLTAKGFCKRK*SFPGLG
Trigger: GCCCAAGCCAGGGAAGGACAACTTGCGTTTGCAGAA...ACCTTTTGCTGTCAAAGGTTTGGGGCCAGATCTCTGCTTGCTGAGGCATGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 90 bp TGGGAAAGCCGAGGCTGCATCATCAGAGGTAGATTGGCCGGAAGGTaGGAGCAGTTTTCGCTGAGCTATGCTAAATGGGATATTCCCGCA +
Preference number: 5 (lower is better)
Translates to: WESRGCIIRGRLAGR*EQFSLSYAKWDIPA
Trigger: TGCGGGAATATCCCATTTAGCATAGCTCAGCGAAAACTGCTCCCACCTTCCGGCCAATCTACCTCTGATGATGCAGCCTCGGCTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp GGCAGGCACCTCCTGCTCTGTGGGGGTGGGCACCTCTaGCTCCAGGCTCTGCCGCGGCTCTGGGCACGGAGG +
Preference number: 6 (lower is better)
Translates to: GRHLLLCGGGHL*LQALPRLWARR
Trigger: CCTCCGTGCCCAGAGCCGCGGCAGAGCCTGGAGCCAGAGGTGCCCACCCCCACAGAGCAGGAGGTGCCTGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CAA 72 bp GGAGGGGGCCGGGTGGCCTCCTGCAGCTTCCGGGCGTaGAAGCGAGGCCGGTACAGGAAGGGCAGGCGGGTG +
Preference number: 6 (lower is better)
Translates to: GGGRVASCSFRA*KRGRYRKGRRV
Trigger: CACCCGCCTGCCCTTCCTGTACCGGCCTCGCTTCAACGCCCGGAAGCTGCAGGAGGCCACCCGGCCCCCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CAA 90 bp AGGGCTGGAAGAGCGGCTGCCCCCAGACACGTGAGGGGCGCCCTGTaGTCGCCGGCTCAACCACAGGCGCGTCCGCTGCGAGCCAGCGGT +
Preference number: 6 (lower is better)
Translates to: RAGRAAAPRHVRGAL*SPAQPQARPLRASG
Trigger: ACCGCTGGCTCGCAGCGGACGCGCCTGTGGTTGAGCCGGCGACAACAGGGCGCCCCTCACGTGTCTGGGGGCAGCCGCTCTTCCAGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CAA 72 bp AGAGCGGCTGCCCCCAGACACGTGAGGGGCGCCCTGTaGTCGCCGGCTCAACCACAGGCGCGTCCGCTGCGA +
Preference number: 6 (lower is better)
Translates to: RAAAPRHVRGAL*SPAQPQARPLR
Trigger: TCGCAGCGGACGCGCCTGTGGTTGAGCCGGCGACAACAGGGCGCCCCTCACGTGTCTGGGGGCAGCCGCTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS TCA 72 bp GGCTCAACCACAGGCGCGTCCGCTGCGAGCCAGCGGTaGGGGGTGGCGGCCAAGAGGCTTGGGAAAGCCGAG +
Preference number: 6 (lower is better)
Translates to: GSTTGASAASQR*GVAAKRLGKAE
Trigger: CTCGGCTTTCCCAAGCCTCTTGGCCGCCACCCCTCACCGCTGGCTCGCAGCGGACGCGCCTGTGGTTGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS TCA 72 bp CTCTCTGCCAGGGCCCATGGGGACCAGGCTGTGCGGTaGGGACTCCAGCGAGCGGCAGGTCGGGGCTATGGG +
Preference number: 6 (lower is better)
Translates to: LSARAHGDQAVR*GLQRAAGRGYG
Trigger: CCCATAGCCCCGACCTGCCGCTCGCTGGAGTCCTCACCGCACAGCCTGGTCCCCATGGGCCCTGGCAGAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS GCA 72 bp ATGGAGCGGACTGTGGGAGGGGGCCGGGTGGCCTCCTaGAGCTTCCGGGCGTTGAAGCGAGGCCGGTACAGG +
Preference number: 6 (lower is better)
Translates to: MERTVGGGRVAS*SFRALKRGRYR
Trigger: CCTGTACCGGCCTCGCTTCAACGCCCGGAAGCTGCAGGAGGCCACCCGGCCCCCTCCCACAGTCCGCTCCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp CCACAGGCGCGTCCGCTGCGAGCCAGCGGTGAGGGGTaGCGGCCAAGAGGCTTGGGAAAGCCGAGGCTGCAT +
Preference number: 6 (lower is better)
Translates to: PQARPLRASGEG*RPRGLGKPRLH
Trigger: ATGCAGCCTCGGCTTTCCCAAGCCTCTTGGCCGCCACCCCTCACCGCTGGCTCGCAGCGGACGCGCCTGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp TGCGGGCCCTCAGCAGCGTGCGGGGCTGTGACCTCCTaGTCATGGCTGGCCTCACTCACGGGGGACAGGGAG +
Preference number: 6 (lower is better)
Translates to: CGPSAACGAVTS*SWLASLTGDRE
Trigger: CTCCCTGTCCCCCGTGAGTGAGGCCAGCCATGACCAGGAGGTCACAGCCCCGCACGCTGCTGAGGGCCCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp GAGGCCAGCAGAGAGAGGCTCGGGGAGCAGGCTCTGTaGGCTTGCAGGAGGCAGGTCTGTGGCCCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: EASRERLGEQAL*ACRRQVCGPSL
Trigger: CAGGGAGGGGCCACAGACCTGCCTCCTGCAAGCCCACAGAGCCTGCTCCCCGAGCCTCTCTCTGCTGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp ACAACCCTGGCACTAGCCTCTCTGGGCACTGAGGCCTaGAAGCCGGGTGGCGGCCGTGGTACAGGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: TTLALASLGTEA*KPGGGRGTGGS
Trigger: GGAGCCCCCTGTACCACGGCCGCCACCCGGCTTCCAGGCCTCAGTGCCCAGAGAGGCTAGTGCCAGGGTTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp GGGGCTCCTCAGGCAAGGGACTGGCAGCCTGGACTGTaGTGGGCAGTGGGCGGATGTGAGCCACTGGGACCA +
Preference number: 6 (lower is better)
Translates to: GAPQARDWQPGL*WAVGGCEPLGP
Trigger: TGGTCCCAGTGGCTCACATCCGCCCACTGCCCACCACAGTCCAGGCTGCCAGTCCCTTGCCTGAGGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS TCA 72 bp GCCGAGGCTACAACCTGGGGCCCCATGGCCCTGAATTaGGCAGCTAGAATCCTGCGCTGGGTGAGGCCGATG +
Preference number: 6 (lower is better)
Translates to: AEATTWGPMALN*AARILRWVRPM
Trigger: CATCGGCCTCACCCAGCGCAGGATTCTAGCTGCTCAATTCAGGGCCATGGGGCCCCAGGTTGTAGCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS GCA 72 bp AGGGGTTCCCTGGAGGCTTGGGCCGCACACCTCGGGTaGCATCGACGCAGCCGATATGAGCATGACTGTGTC +
Preference number: 6 (lower is better)
Translates to: RGSLEAWAAHLG*HRRSRYEHDCV
Trigger: GACACAGTCATGCTCATATCGGCTGCGTCGATGGCACCCGAGGTGTGCGGCCCAAGCCTCCAGGGAACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS GCA 72 bp CTGCGCTGGGTGAGGCCGATGGAGAACGTGGACTTCTaGAGGGGTGATGCCACGTGGTGGATGATGGGGGTG +
Preference number: 6 (lower is better)
Translates to: LRWVRPMENVDF*RGDATWWMMGV
Trigger: CACCCCCATCATCCACCACGTGGCATCACCCCTGCAGAAGTCCACGTTCTCCATCGGCCTCACCCAGCGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp GGTCCTGGGCTCTGGGGGCCATTCTGGCCACTTCACTaGAGCCTCCAGCCAGTCGCTGTGCGGTTGAAGTTC +
Preference number: 6 (lower is better)
Translates to: GPGLWGPFWPLH*SLQPVAVRLKF
Trigger: GAACTTCAACCGCACAGCGACTGGCTGGAGGCTCCAGTGAAGTGGCCAGAATGGCCCCCAGAGCCCAGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp GCCTGCTTAGGACTGCTCTCAGCTACCGGCCTCCTCTaGATGACGGGACTGCAGGAACCACGAGAACCCCAG +
Preference number: 6 (lower is better)
Translates to: ACLGLLSATGLL*MTGLQEPREPQ
Trigger: CTGGGGTTCTCGTGGTTCCTGCAGTCCCGTCATCCAGAGGAGGCCGGTAGCTGAGAGCAGTCCTAAGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp CTGGGGTGGCCCGGCCAAGCCGCCCACCCTGGTTTCTaGGCACCACGTGTTTGCAAGGACATTGACAAATGG +
Preference number: 6 (lower is better)
Translates to: LGWPGQAAHPGF*APRVCKDIDKW
Trigger: CCATTTGTCAATGTCCTTGCAAACACGTGGTGCCCAGAAACCAGGGTGGGCGGCTTGGCCGGGCCACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp TGCGAGCCAGCGGTGAGGGGTGGCGGCCAAGAGGCTTaGGAAAGCCGAGGCTGCATCATCAGAGGTAGATTG +
Preference number: 6 (lower is better)
Translates to: CEPAVRGGGQEA*ESRGCIIRGRL
Trigger: CAATCTACCTCTGATGATGCAGCCTCGGCTTTCCCAAGCCTCTTGGCCGCCACCCCTCACCGCTGGCTCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp TGGGAGGCCTGTGTCTCCTGTGGTCCAAGGAGGACCTaGGGCCAGGGGTGTGGAGGCCTGAGTATTCTGCTT +
Preference number: 6 (lower is better)
Translates to: WEACVSCGPRRT*GQGCGGLSILL
Trigger: AAGCAGAATACTCAGGCCTCCACACCCCTGGCCCCAGGTCCTCCTTGGACCACAGGAGACACAGGCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp GGTGGCATCTCCATCCTGGCTGTTGGATCCCACTTCTaGGGCTGTCCTGGGAGGCTCAGGGGTCCCATTGTG +
Preference number: 6 (lower is better)
Translates to: GGISILAVGSHF*GCPGRLRGPIV
Trigger: CACAATGGGACCCCTGAGCCTCCCAGGACAGCCCCAGAAGTGGGATCCAACAGCCAGGATGGAGATGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp AGCCCCTTCTTCTGTCCATCCCATGGTCCTGGGCTCTaGGGGCCATTCTGGCCACTTCACTGGAGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: SPFFCPSHGPGL*GPFWPLHWSLQ
Trigger: CTGGAGGCTCCAGTGAAGTGGCCAGAATGGCCCCCAGAGCCCAGGACCATGGGATGGACAGAAGAAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CAA 90 bp AAGCCGCCCACCCTGGTTTCTGGGCACCACGTGTTTGCAAGGACATaGACAAATGGCATCTGTCCGAGCCAGAGGCTCTCTGGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: KPPTLVSGHHVFART*TNGICPSQRLSGLG
Trigger: CCCCAAACCAGAGAGCCTCTGGCTCGGACAGATGCCATTTGTCAATGTCCTTGCAAACACGTGGTGCCCAGAAACCAGGGTGGGCGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS GCA 72 bp CAAGCCGCCCACCCTGGTTTCTGGGCACCACGTGTTTaGAAGGACATTGACAAATGGCATCTGTCCGAGCCA +
Preference number: 6 (lower is better)
Translates to: QAAHPGFWAPRV*KDIDKWHLSEP
Trigger: TGGCTCGGACAGATGCCATTTGTCAATGTCCTTGCAAACACGTGGTGCCCAGAAACCAGGGTGGGCGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS GCA 72 bp ATCATCTTCTTCCGGGCTGCCTTCCTCAGGAGCTTCTaGAAACGCAAGTTGTCCTTCCCTGGCTTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: IIFFRAAFLRSF*KRKLSFPGLGS
Trigger: GCTGCCCAAGCCAGGGAAGGACAACTTGCGTTTGCAGAAGCTCCTGAGGAAGGCAGCCCGGAAGAAGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS GCA 72 bp AGCGAGGTGTGTGCCTCCCATCATCTTCTTCCGGGCTaGCTTCCTCAGGAGCTTCTGCAAACGCAAGTTGTC +
Preference number: 6 (lower is better)
Translates to: SEVCASHHLLPG*LPQELLQTQVV
Trigger: GACAACTTGCGTTTGCAGAAGCTCCTGAGGAAGGCAGCCCGGAAGAAGATGATGGGAGGCACACACCTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp GGAAGGTGGGAGCAGTTTTCGCTGAGCTATGCTAAATaGGATATTCCCGCAGACCTCCTGTCTGGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: GRWEQFSLSYAK*DIPADLLSGVA
Trigger: GGCCACCCCAGACAGGAGGTCTGCGGGAATATCCCATTTAGCATAGCTCAGCGAAAACTGCTCCCACCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CAA 90 bp GGCCAAGAGGCTTGGGAAAGCCGAGGCTGCATCATCAGAGGTAGATaGGCCGGAAGGTGGGAGCAGTTTTCGCTGAGCTATGCTAAATGG +
Preference number: 6 (lower is better)
Translates to: GQEAWESRGCIIRGR*AGRWEQFSLSYAKW
Trigger: CCATTTAGCATAGCTCAGCGAAAACTGCTCCCACCTTCCGGCCAATCTACCTCTGATGATGCAGCCTCGGCTTTCCCAAGCCTCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS TCA 72 bp CCCTGGTTTCTGGGCACCACGTGTTTGCAAGGACATTaGCAAATGGCATCTGTCCGAGCCAGAGGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: PWFLGTTCLQGH*QMASVRARGSL
Trigger: CAGAGAGCCTCTGGCTCGGACAGATGCCATTTGTCAATGTCCTTGCAAACACGTGGTGCCCAGAAACCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CAA 72 bp GCTTGGGAAAGCCGAGGCTGCATCATCAGAGGTAGATaGGCCGGAAGGTGGGAGCAGTTTTCGCTGAGCTAT +
Preference number: 6 (lower is better)
Translates to: AWESRGCIIRGR*AGRWEQFSLSY
Trigger: ATAGCTCAGCGAAAACTGCTCCCACCTTCCGGCCAATCTACCTCTGATGATGCAGCCTCGGCTTTCCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp TTCTGGGCACCACGTGTTTGCAAGGACATTGACAAATaGCATCTGTCCGAGCCAGAGGCTCTCTGGTTTGGG +
Preference number: 6 (lower is better)
Translates to: FWAPRVCKDIDK*HLSEPEALWFG
Trigger: CCCAAACCAGAGAGCCTCTGGCTCGGACAGATGCCATTTGTCAATGTCCTTGCAAACACGTGGTGCCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CAA 72 bp ACCCTGGTTTCTGGGCACCACGTGTTTGCAAGGACATaGACAAATGGCATCTGTCCGAGCCAGAGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: TLVSGHHVFART*TNGICPSQRLS
Trigger: AGAGAGCCTCTGGCTCGGACAGATGCCATTTGTCAATGTCCTTGCAAACACGTGGTGCCCAGAAACCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3
CDS CCA 72 bp CGAGGCTGCATCATCAGAGGTAGATTGGCCGGAAGGTaGGAGCAGTTTTCGCTGAGCTATGCTAAATGGGAT +
Preference number: 6 (lower is better)
Translates to: RGCIIRGRLAGR*EQFSLSYAKWD
Trigger: ATCCCATTTAGCATAGCTCAGCGAAAACTGCTCCCACCTTCCGGCCAATCTACCTCTGATGATGCAGCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640310.2
ENST00000672118.3