Pregenerated sensors for PRR23C (Homo sapiens)
Ensembl gene IDs: ENSG00000233701Ensembl transcript IDs: ENST00000413199.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGTACAACTATGTGCAAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAATTGGGAGAAAAGGTGTaGCATGGTAACGTGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GTTMCKITQKGSGHHREKLGEKV*HGNVLG Trigger: CCCCAGCACGTTACCATGGCACACCTTTTCTCCCAA...TTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTTGCACATAGTTGTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR-3UTR GCA 90 bp | GGTACAACTATGTGCAAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAAGAGATCCTTGTAGGTTaGGCAACATACACACAACGG | + |
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Preference number: 2 (lower is better) Translates to: GTTMCKITQKGSGHHREKEILVG*ATYTQR Trigger: CCGTTGTGTGTATGTTGCGCAACCTACAAGGATCTC...TTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTTGCACATAGTTGTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR-3UTR CCA 90 bp | CGTACTCTTGTGGCCCAAAGGTTCCATCTAGCTATTGTATTGTATTATTGTATATGGAGCCCAGCAGGGTaGCAAGGGATTGTGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: RTLVAQRFHLAIVLYYCIWSPAG*QGIVGG Trigger: GCCTCCCACAATCCCTTGCCACCCTGCTGGGCTCCA...TATACAATAATACAATACAATAGCTAGATGGAACCTTTGGGCCACAAGAGTACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR-3UTR CCA 90 bp | CGTACTCTTGTGGCCCAAAGGTTCCATCTAGCTATTGTATTGTATTATTGTATACAGGAGACGGTCTCCTaGAGCCCAGCAGGGTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: RTLVAQRFHLAIVLYYCIQETVS*SPAGWQ Trigger: TTGCCACCCTGCTGGGCTCCAGGAGACCGTCTCCTG...TATACAATAATACAATACAATAGCTAGATGGAACCTTTGGGCCACAAGAGTACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR-3UTR TCA 90 bp | AAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAATTCCATGTTGAGAAGGAAATGTGCTGGAACTaGGGTTCAAAGCAAAACCAG | + |
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Preference number: 2 (lower is better) Translates to: KITQKGSGHHREKFHVEKEMCWN*GSKQNQ Trigger: CTGGTTTTGCTTTGAACCTCAGTTCCAGCACATTTC...CTTCTCAACATGGAATTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR-3UTR GCA 90 bp | TCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGATCAGGGGGAATGGAGCTaGCTAGGGGTGACTTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: SVCFANNKHLSRYNYVQDQGEWS*LGVTSK Trigger: TTTGGAAGTCACCCCTAGGCAGCTCCATTCCCCCTG...ATCTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR-3UTR GCA 90 bp | TCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGATTGTGCCATGGTAACGTaGTGGGGAAAGGGCGGATTT | + |
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Preference number: 2 (lower is better) Translates to: SVCFANNKHLSRYNYVQDCAMVT*WGKGGF Trigger: AAATCCGCCCTTTCCCCAGCACGTTACCATGGCACA...ATCTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR-3UTR CCA 90 bp | TCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGATGCCATGGTAACGTGCTaGGGAAAGGGCGGATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: SVCFANNKHLSRYNYVQDAMVTC*GKGGFL Trigger: TAAAAATCCGCCCTTTCCCCAGCACGTTACCATGGC...ATCTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR CAA 90 bp | ATGATCATTATTCCCAGTTCGGTCTGTTTTGCAAACAACAAACATTaGTCCAGGTACAACTATGTGCAAGATCACCCAAAAGGGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: MIIIPSSVCFANNKH*SRYNYVQDHPKGLR Trigger: CCTGAGCCCTTTTGGGTGATCTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGAACTGGGAATAATGATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR-3UTR TCA 90 bp | CGTACTCTTGTGGCCCAAAGGTTCCATCTAGCTATTGTATTGTATTATTGTATAAAAAAGGAGGGTACATaGTCATTATTCCCAGTTCGG | + |
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Preference number: 2 (lower is better) Translates to: RTLVAQRFHLAIVLYYCIKKEGT*SLFPVR Trigger: CCGAACTGGGAATAATGATCATGTACCCTCCTTTTT...TATACAATAATACAATACAATAGCTAGATGGAACCTTTGGGCCACAAGAGTACG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR-3UTR GCA 90 bp | CGTACTCTTGTGGCCCAAAGGTTCCATCTAGCTATTGTATTGTATTATTGTATAACTGATCCAGAATTCTaGAACGCAGCCTGTATCAAA | + |
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Preference number: 2 (lower is better) Translates to: RTLVAQRFHLAIVLYYCITDPEF*NAACIK Trigger: TTTGATACAGGCTGCGTTGCAGAATTCTGGATCAGT...TATACAATAATACAATACAATAGCTAGATGGAACCTTTGGGCCACAAGAGTACG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR-3UTR TCA 90 bp | TCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGATGGAAAAATTCCATGTTaGGAAGGTCGTCATAAACTA | + |
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Preference number: 2 (lower is better) Translates to: SVCFANNKHLSRYNYVQDGKIPC*EGRHKL Trigger: TAGTTTATGACGACCTTCTCAACATGGAATTTTTCC...ATCTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR GCA 72 bp | TCTATCCGTTATCCACTCTCCGAGATCCTTGTAGGTTaGGCAACATACACACAACGGCTATCAGGAGACGGT | + |
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Preference number: 3 (lower is better) Translates to: SIRYPLSEILVG*ATYTQRLSGDG Trigger: ACCGTCTCCTGATAGCCGTTGTGTGTATGTTGCGCAACCTACAAGGATCTCGGAGAGTGGATAACGGATAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR-3UTR CAA 90 bp | AAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAATTCCATGTTGAGAAGCGAGATCCTTGTAGGTaGCGCAACATACACACAACG | + |
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Preference number: 3 (lower is better) Translates to: KITQKGSGHHREKFHVEKRDPCR*RNIHTT Trigger: CGTTGTGTGTATGTTGCGCAACCTACAAGGATCTCG...CTTCTCAACATGGAATTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR GCA 72 bp | TTGCAAACAACAAACATTTGTCCAGGTACAACTATGTaGAAGATCACCCAAAAGGGCTCAGGCCACCATAGG | + |
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Preference number: 3 (lower is better) Translates to: LQTTNICPGTTM*KITQKGSGHHR Trigger: CCTATGGTGGCCTGAGCCCTTTTGGGTGATCTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR GCA 72 bp | AGGGTACATGATCATTATTCCCAGTTCGGTCTGTTTTaGAAACAACAAACATTTGTCCAGGTACAACTATGT | + |
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Preference number: 3 (lower is better) Translates to: RVHDHYSQFGLF*KQQTFVQVQLC Trigger: ACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGAACTGGGAATAATGATCATGTACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR GCA 90 bp | CTTGTAGGTTGCGCAACATACACACAACGGCTATCAGGAGACGGTCTCCTGGAGCGGAGTCGGTGCTGCTaGTGGGGGAACCTCGCACGC | + |
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Preference number: 4 (lower is better) Translates to: LVGCATYTQRLSGDGLLERSRCC*WGNLAR Trigger: GCGTGCGAGGTTCCCCCAGCAGCAGCACCGACTCCG...CTCCAGGAGACCGTCTCCTGATAGCCGTTGTGTGTATGTTGCGCAACCTACAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR GCA 90 bp | AAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAATTCCATGTTGAGAAGGGCGTCTTCGGACCTTaGACGGAGGGCGCTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: KITQKGSGHHREKFHVEKGVFGP*TEGALG Trigger: TCCCAGAGCGCCCTCCGTGCAAGGTCCGAAGACGCC...CTTCTCAACATGGAATTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CCA 90 bp | GGTACAACTATGTGCAAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAATGGAGCCCAGCAGGGTaGCAAGGGATTGTGGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: GTTMCKITQKGSGHHREKWSPAG*QGIVGG Trigger: GCCTCCCACAATCCCTTGCCACCCTGCTGGGCTCCA...TTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTTGCACATAGTTGTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR GCA 90 bp | AAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAATTCCATGTTGAGAAGGATCGGAGTCGGTGCTaGTGCTGGGGGAACCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: KITQKGSGHHREKFHVEKDRSRC*CWGNLA Trigger: TGCGAGGTTCCCCCAGCAGCAGCACCGACTCCGATC...CTTCTCAACATGGAATTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CCA 90 bp | AAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAATTCCATGTTGAGAAGAGTCGGTGCTGCTGCTaGGGGAACCTCGCACGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KITQKGSGHHREKFHVEKSRCCC*GNLARC Trigger: ACAGCGTGCGAGGTTCCCCCAGCAGCAGCACCGACT...CTTCTCAACATGGAATTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CCA 90 bp | CCGAAGCAGCAATCTCACAGTCTGAAAGTAGACTGTATTTCAACTAGCGTATTTAGCTCCGGGCGCGCGTaGGGACCTGGACTCGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: PKQQSHSLKVDCISTSVFSSGRA*GPGLGE Trigger: CTCTCCGAGTCCAGGTCCCCACGCGCGCCCGGAGCT...AAATACGCTAGTTGAAATACAGTCTACTTTCAGACTGTGAGATTGCTGCTTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR GCA 90 bp | GTTCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGGCAGACCAGTCGCCCTaGGCTCCTGAGCATTCGTCG | + |
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Preference number: 4 (lower is better) Translates to: VRSVLQTTNICPGTTMCKADQSP*APEHSS Trigger: CGACGAATGCTCAGGAGCGCAGGGCGACTGGTCTGC...CTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR GCA 90 bp | GGTACAACTATGTGCAAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAATGTGCCATGGTAACGTaGTGGGGAAAGGGCGGATTT | + |
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Preference number: 4 (lower is better) Translates to: GTTMCKITQKGSGHHREKCAMVT*WGKGGF Trigger: AAATCCGCCCTTTCCCCAGCACGTTACCATGGCACA...TTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTTGCACATAGTTGTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR GCA 90 bp | GGTACAACTATGTGCAAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAACTGGGAGGCAAAGGTTaGAGTGAGCTGAGATTGTGC | + |
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Preference number: 4 (lower is better) Translates to: GTTMCKITQKGSGHHREKLGGKG*SELRLC Trigger: GCACAATCTCAGCTCACTGCAACCTTTGCCTCCCAG...TTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTTGCACATAGTTGTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CCA 90 bp | TCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGATACCTCGCACGCTGTGTaGCTCAGCCTCGCGCGATGG | + |
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Preference number: 4 (lower is better) Translates to: SVCFANNKHLSRYNYVQDTSHAV*LSLARW Trigger: CCATCGCGCGAGGCTGAGCCACACAGCGTGCGAGGT...ATCTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| 3UTR CAA 72 bp | ATCTATCCGTTATCCACTCTCCGAGATCCTTGTAGGTaGCGCAACATACACACAACGGCTATCAGGAGACGG | + |
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Preference number: 4 (lower is better) Translates to: IYPLSTLRDPCR*RNIHTTAIRRR Trigger: CCGTCTCCTGATAGCCGTTGTGTGTATGTTGCGCAACCTACAAGGATCTCGGAGAGTGGATAACGGATAGAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR GCA 90 bp | TCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGATGGAGATCGGAGTCGGTaGTGCTGCTGGGGGAACCTC | + |
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Preference number: 4 (lower is better) Translates to: SVCFANNKHLSRYNYVQDGDRSR*CCWGNL Trigger: GAGGTTCCCCCAGCAGCAGCACCGACTCCGATCTCC...ATCTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CCA 90 bp | TCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGATCAGGAGACGGTCTCCTaGAGCCCAGCAGGGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SVCFANNKHLSRYNYVQDQETVS*SPAGWQ Trigger: TTGCCACCCTGCTGGGCTCCAGGAGACCGTCTCCTG...ATCTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CCA 90 bp | AAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAATTCCATGTTGAGAAGCAAATTATTTCCGGCTaGGTGCGATGGCTCGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: KITQKGSGHHREKFHVEKQIISG*VRWLVP Trigger: AGGCACGAGCCATCGCACCCAGCCGGAAATAATTTG...CTTCTCAACATGGAATTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CCA 90 bp | GGTACAACTATGTGCAAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAAAAAATTAGTCGTGTGTaGTGGCGCATGCCTGTGATC | + |
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Preference number: 4 (lower is better) Translates to: GTTMCKITQKGSGHHREKKISRV*WRMPVI Trigger: GATCACAGGCATGCGCCACCACACACGACTAATTTT...TTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTTGCACATAGTTGTACC 48% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR TCA 90 bp | GGTACAACTATGTGCAAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAAGAAATGTGCTGGAACTaGGGTTCAAAGCAAAACCAG | + |
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Preference number: 4 (lower is better) Translates to: GTTMCKITQKGSGHHREKEMCWN*GSKQNQ Trigger: CTGGTTTTGCTTTGAACCTCAGTTCCAGCACATTTC...TTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTTGCACATAGTTGTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CCA 90 bp | GTTCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGGAGGCAACTCATTCCTaGAACAGGCGTCTTCGGACC | + |
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Preference number: 4 (lower is better) Translates to: VRSVLQTTNICPGTTMCKEATHS*NRRLRT Trigger: GGTCCGAAGACGCCTGTTCCAGGAATGAGTTGCCTC...CTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR TCA 90 bp | CGTACTCTTGTGGCCCAAAGGTTCCATCTAGCTATTGTATTGTATTATTGTATAGGCGGGAGAATTGCTTaGACCTGGGAGGCAAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: RTLVAQRFHLAIVLYYCIGGRIA*TWEAKV Trigger: AACCTTTGCCTCCCAGGTTCAAGCAATTCTCCCGCC...TATACAATAATACAATACAATAGCTAGATGGAACCTTTGGGCCACAAGAGTACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR GCA 90 bp | CGTACTCTTGTGGCCCAAAGGTTCCATCTAGCTATTGTATTGTATTATTGTATACAGGGGGAATGGAGCTaGCTAGGGGTGACTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: RTLVAQRFHLAIVLYYCIQGEWS*LGVTSK Trigger: TTTGGAAGTCACCCCTAGGCAGCTCCATTCCCCCTG...TATACAATAATACAATACAATAGCTAGATGGAACCTTTGGGCCACAAGAGTACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CCA 90 bp | TCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGATATTAGTCGTGTGTGGTaGCGCATGCCTGTGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: SVCFANNKHLSRYNYVQDISRVW*RMPVIP Trigger: TGGGATCACAGGCATGCGCCACCACACACGACTAAT...ATCTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR GCA 90 bp | CGTACTCTTGTGGCCCAAAGGTTCCATCTAGCTATTGTATTGTATTATTGTATATTGGGAGAAAAGGTGTaGCATGGTAACGTGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RTLVAQRFHLAIVLYYCILGEKV*HGNVLG Trigger: CCCCAGCACGTTACCATGGCACACCTTTTCTCCCAA...TATACAATAATACAATACAATAGCTAGATGGAACCTTTGGGCCACAAGAGTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR GCA 90 bp | GGTACAACTATGTGCAAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAACAGTTCGGTCTGTTTTaGAAACAACAAACATTTGTC | + |
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Preference number: 4 (lower is better) Translates to: GTTMCKITQKGSGHHREKQFGLF*KQQTFV Trigger: GACAAATGTTTGTTGTTTGCAAAACAGACCGAACTG...TTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTTGCACATAGTTGTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR GCA 90 bp | GTTCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGGCACCCTACAGTTACTaGCTTTCTCCTTCCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: VRSVLQTTNICPGTTMCKAPYSY*LSPSTC Trigger: ACAAGTGGAAGGAGAAAGGCAGTAACTGTAGGGTGC...CTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR GCA 90 bp | TCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGATGAGATCCTTGTAGGTTaGGCAACATACACACAACGG | + |
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Preference number: 4 (lower is better) Translates to: SVCFANNKHLSRYNYVQDEILVG*ATYTQR Trigger: CCGTTGTGTGTATGTTGCGCAACCTACAAGGATCTC...ATCTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CCA 90 bp | CGTACTCTTGTGGCCCAAAGGTTCCATCTAGCTATTGTATTGTATTATTGTATAGCCATGGTAACGTGCTaGGGAAAGGGCGGATTTTTA | + |
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Preference number: 4 (lower is better) Translates to: RTLVAQRFHLAIVLYYCIAMVTC*GKGGFL Trigger: TAAAAATCCGCCCTTTCCCCAGCACGTTACCATGGC...TATACAATAATACAATACAATAGCTAGATGGAACCTTTGGGCCACAAGAGTACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR GCA 90 bp | CGTACTCTTGTGGCCCAAAGGTTCCATCTAGCTATTGTATTGTATTATTGTATACCAGGTACAACTATGTaGAAGATCACCCAAAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: RTLVAQRFHLAIVLYYCIPGTTM*KITQKG Trigger: GCCCTTTTGGGTGATCTTGCACATAGTTGTACCTGG...TATACAATAATACAATACAATAGCTAGATGGAACCTTTGGGCCACAAGAGTACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR GCA 90 bp | TCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGATACTGATCCAGAATTCTaGAACGCAGCCTGTATCAAA | + |
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Preference number: 4 (lower is better) Translates to: SVCFANNKHLSRYNYVQDTDPEF*NAACIK Trigger: TTTGATACAGGCTGCGTTGCAGAATTCTGGATCAGT...ATCTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR TCA 90 bp | GTTCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGGGAAAAATTCCATGTTaGGAAGGTCGTCATAAACTA | + |
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Preference number: 4 (lower is better) Translates to: VRSVLQTTNICPGTTMCKGKIPC*EGRHKL Trigger: TAGTTTATGACGACCTTCTCAACATGGAATTTTTCC...CTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CAA 90 bp | CTTGTAGGTTGCGCAACATACACACAACGGCTATCAGGAGACGGTCTCCTGGAGCGAGATCCTTGTAGGTaGCGCAACATACACACAACG | + |
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Preference number: 5 (lower is better) Translates to: LVGCATYTQRLSGDGLLERDPCR*RNIHTT Trigger: CGTTGTGTGTATGTTGCGCAACCTACAAGGATCTCG...CTCCAGGAGACCGTCTCCTGATAGCCGTTGTGTGTATGTTGCGCAACCTACAAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CAA 90 bp | CTTGTAGGTTGCGCAACATACACACAACGGCTATCAGGAGACGGTCTCCTGGAGGTCTCATTAGCGCTCTaGCCAGGTTTCTGTACGTAC | + |
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Preference number: 5 (lower is better) Translates to: LVGCATYTQRLSGDGLLEVSLAL*PGFCTY Trigger: GTACGTACAGAAACCTGGCAAGAGCGCTAATGAGAC...CTCCAGGAGACCGTCTCCTGATAGCCGTTGTGTGTATGTTGCGCAACCTACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CAA 90 bp | GTTCGGTCTGTTTTGCAAACAACAAACATTTGTCCAGGTACAACTATGTGCAAGTCCAATCGGCTGCGCTaGGCAGGGCCTGGTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: VRSVLQTTNICPGTTMCKSNRLR*AGPGPP Trigger: AGGAGGACCAGGCCCTGCCAAGCGCAGCCGATTGGA...CTTGCACATAGTTGTACCTGGACAAATGTTTGTTGTTTGCAAAACAGACCGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CAA 90 bp | GGTACAACTATGTGCAAGATCACCCAAAAGGGCTCAGGCCACCATAGGGAAAAATTTCTGTACGTACTCTaGTGGCCCAAAGGTTCCATC | + |
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Preference number: 5 (lower is better) Translates to: GTTMCKITQKGSGHHREKFLYVL*WPKGSI Trigger: GATGGAACCTTTGGGCCACAAGAGTACGTACAGAAA...TTTTTCCCTATGGTGGCCTGAGCCCTTTTGGGTGATCTTGCACATAGTTGTACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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| CDS-3UTR CAA 90 bp | CCGAAGCAGCAATCTCACAGTCTGAAAGTAGACTGTATTTCAACTAGCGTATTTGCAAACAACAAACATTaGTCCAGGTACAACTATGTG | + |
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Preference number: 5 (lower is better) Translates to: PKQQSHSLKVDCISTSVFANNKH*SRYNYV Trigger: CACATAGTTGTACCTGGACAAATGTTTGTTGTTTGC...AAATACGCTAGTTGAAATACAGTCTACTTTCAGACTGTGAGATTGCTGCTTCGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413199.1 |
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