Pregenerated sensors for PRR23B (Homo sapiens)
Ensembl gene IDs: ENSG00000184814Ensembl transcript IDs: ENST00000329447.5
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCGAACACGCGGTGCCCAATTTCCAGGTTGTTGGATACTCAATGTaGGAGATTCCCGCAATCCTAGAGGGCCTCCAGCAGAGCGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: SEHAVPNFQVVGYSM*EIPAILEGLQQSGQ Trigger: CTGGCCGCTCTGCTGGAGGCCCTCTAGGATTGCGGGAATCTCTCACATTGAGTATCCAACAACCTGGAAATTGGGCACCGCGTGTTCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR CCA 90 bp | GAAAAAGCAATTGTCCGAACACGCGGTGCCCAATTTCCAGGTTGTTaGATACTCAATGTGAGAGATTCCCGCAATCCTAGAGGGCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: EKAIVRTRGAQFPGC*ILNVRDSRNPRGPP Trigger: TGGAGGCCCTCTAGGATTGCGGGAATCTCTCACATTGAGTATCCAACAACCTGGAAATTGGGCACCGCGTGTTCGGACAATTGCTTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR GCA 90 bp | ACTATCGGTAGTGTGCAGCGAAAAAGCAATTGTCCGAACACGCGGTaGCCAATTTCCAGGTTGTTGGATACTCAATGTGAGAGATTCCCG | + |
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Preference number: 1 (lower is better) Translates to: TIGSVQRKSNCPNTR*PISRLLDTQCERFP Trigger: CGGGAATCTCTCACATTGAGTATCCAACAACCTGGAAATTGGGCACCGCGTGTTCGGACAATTGCTTTTTCGCTGCACACTACCGATAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR CCA 90 bp | AACGTAAGAGATCTGGTGATTTCTTGGTTTGGGGAGAAACGGGAGTaGCAGTATGATGCTGGAGAAAGACTGGAATTTGAGAGAAACAAC | + |
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Preference number: 1 (lower is better) Translates to: NVRDLVISWFGEKRE*QYDAGERLEFERNN Trigger: GTTGTTTCTCTCAAATTCCAGTCTTTCTCCAGCATCATACTGCCACTCCCGTTTCTCCCCAAACCAAGAAATCACCAGATCTCTTACGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR-3UTR GCA 90 bp | GGGGAGAAACGGGAGTGGCAGTATGATGCTGGAGAAAGACTGGAATTTGAGAGATGTCCGAACACGCGGTaGCCAATTTCCAGGTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: GEKREWQYDAGERLEFERCPNTR*PISRLL Trigger: CAACAACCTGGAAATTGGGCACCGCGTGTTCGGACA...TCTCTCAAATTCCAGTCTTTCTCCAGCATCATACTGCCACTCCCGTTTCTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR CAA 90 bp | GGGAGAAACGGGAGTGGCAGTATGATGCTGGAGAAAGACTGGAATTaGAGAGAAACAACTGATGCAAAACGAGGGAGAATGAAGGGATCT | + |
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Preference number: 2 (lower is better) Translates to: GRNGSGSMMLEKDWN*RETTDAKRGRMKGS Trigger: AGATCCCTTCATTCTCCCTCGTTTTGCATCAGTTGTTTCTCTCAAATTCCAGTCTTTCTCCAGCATCATACTGCCACTCCCGTTTCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGATAAGGGGTTCCTAGGAAGAAGCAACATACAGTCTTGTATAGTAAGCATAGGGGAGAAACGGGAGTaGCAGTATGATGCTGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: QDKGFLGRSNIQSCIVSIGEKRE*QYDAGE Trigger: TTCTCCAGCATCATACTGCCACTCCCGTTTCTCCCC...TATGCTTACTATACAAGACTGTATGTTGCTTCTTCCTAGGAACCCCTTATCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR CAA 90 bp | GCGCAGATTTTCTATTTAAAGATGAGGTCTAGAATATACCTTTTCTaGCTGACGTCTTCATCTCCTACTATCGGTAGTGTGCAGCGAAAA | + |
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Preference number: 2 (lower is better) Translates to: AQIFYLKMRSRIYLF*LTSSSPTIGSVQRK Trigger: TTTTCGCTGCACACTACCGATAGTAGGAGATGAAGACGTCAGCAAGAAAAGGTATATTCTAGACCTCATCTTTAAATAGAAAATCTGCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGAAGCAACATACAGTCTTGTATAGTAAGCATACTATTTGGCAGTTTCCTCAATTTCCAGGTTGTTaGATACTCAATGTGAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: RKKQHTVLYSKHTIWQFPQFPGC*ILNVRD Trigger: ATCTCTCACATTGAGTATCCAACAACCTGGAAATTG...AGGAAACTGCCAAATAGTATGCTTACTATACAAGACTGTATGTTGCTTCTTCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR TCA 72 bp | GCGGTGCCCAATTTCCAGGTTGTTGGATACTCAATGTaGGAGATTCCCGCAATCCTAGAGGGCCTCCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: AVPNFQVVGYSM*EIPAILEGLQQ Trigger: CTGCTGGAGGCCCTCTAGGATTGCGGGAATCTCTCACATTGAGTATCCAACAACCTGGAAATTGGGCACCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR-3UTR CAA 90 bp | CAGGATAAGGGGTTCCTAGGAAGAAGCAACATACAGTCTTGTATAGTAAGCATAGCAGAGCGGCCAGGATaGTTGTGTGTACGTGGGGGT | + |
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Preference number: 3 (lower is better) Translates to: QDKGFLGRSNIQSCIVSIAERPG*LCVRGG Trigger: ACCCCCACGTACACACAACAATCCTGGCCGCTCTGC...TATGCTTACTATACAAGACTGTATGTTGCTTCTTCCTAGGAACCCCTTATCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR GCA 72 bp | AGTGTGCAGCGAAAAAGCAATTGTCCGAACACGCGGTaGCCAATTTCCAGGTTGTTGGATACTCAATGTGAG | + |
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Preference number: 3 (lower is better) Translates to: SVQRKSNCPNTR*PISRLLDTQCE Trigger: CTCACATTGAGTATCCAACAACCTGGAAATTGGGCACCGCGTGTTCGGACAATTGCTTTTTCGCTGCACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR CCA 72 bp | ATTGTCCGAACACGCGGTGCCCAATTTCCAGGTTGTTaGATACTCAATGTGAGAGATTCCCGCAATCCTAGA | + |
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Preference number: 3 (lower is better) Translates to: IVRTRGAQFPGC*ILNVRDSRNPR Trigger: TCTAGGATTGCGGGAATCTCTCACATTGAGTATCCAACAACCTGGAAATTGGGCACCGCGTGTTCGGACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR CCA 72 bp | GATCTGGTGATTTCTTGGTTTGGGGAGAAACGGGAGTaGCAGTATGATGCTGGAGAAAGACTGGAATTTGAG | + |
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Preference number: 3 (lower is better) Translates to: DLVISWFGEKRE*QYDAGERLEFE Trigger: CTCAAATTCCAGTCTTTCTCCAGCATCATACTGCCACTCCCGTTTCTCCCCAAACCAAGAAATCACCAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR-3UTR CAA 90 bp | CAGGATAAGGGGTTCCTAGGAAGAAGCAACATACAGTCTTGTATAGTAAGCATATGCCCAATTTCCAGGTaGTTGGATACTCAATGTGAG | + |
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Preference number: 3 (lower is better) Translates to: QDKGFLGRSNIQSCIVSICPISR*LDTQCE Trigger: CTCACATTGAGTATCCAACAACCTGGAAATTGGGCA...TATGCTTACTATACAAGACTGTATGTTGCTTCTTCCTAGGAACCCCTTATCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR-3UTR CAA 90 bp | AGGAAGAAGCAACATACAGTCTTGTATAGTAAGCATACTATTTGGCAGTTTCCTAGATCTGGTGATTTCTaGGTTTGGGGAGAAACGGGA | + |
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Preference number: 3 (lower is better) Translates to: RKKQHTVLYSKHTIWQFPRSGDF*VWGETG Trigger: TCCCGTTTCTCCCCAAACCAAGAAATCACCAGATCT...AGGAAACTGCCAAATAGTATGCTTACTATACAAGACTGTATGTTGCTTCTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR-3UTR CAA 90 bp | CTAGGAAGAAGCAACATACAGTCTTGTATAGTAAGCATACTATTTGGCAGTTTCCCAATTTCCAGGTTGTaGGATACTCAATGTGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: LGRSNIQSCIVSILFGSFPISRL*DTQCER Trigger: TCTCTCACATTGAGTATCCAACAACCTGGAAATTGG...GAAACTGCCAAATAGTATGCTTACTATACAAGACTGTATGTTGCTTCTTCCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR CCA 72 bp | CCTTGTAAAGAAGCCCAGAAATCTGGACACATTTTCTaGTATCCTTGCGCAGATTTTCTATTTAAAGATGAG | + |
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Preference number: 3 (lower is better) Translates to: PCKEAQKSGHIF*YPCADFLFKDE Trigger: CTCATCTTTAAATAGAAAATCTGCGCAAGGATACCAGAAAATGTGTCCAGATTTCTGGGCTTCTTTACAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | GTGAGAGATTCCCGCAATCCTAGAGGGCCTCCAGCAGAGCGGCCAGGATTGTTGGGTGGTAGGGGAGGCTaGTTGGGACGAGCGGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: VRDSRNPRGPPAERPGLLGGRGG*LGRAGR Trigger: GCGCCCCGCTCGTCCCAACCAGCCTCCCCTACCACC...CAACAATCCTGGCCGCTCTGCTGGAGGCCCTCTAGGATTGCGGGAATCTCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | GTGTGCAGCGAAAAAGCAATTGTCCGAACACGCGGTGCCCAATTTCCAGGTTGTAGTCTGGGCTGCTGGTaGTGCCTCGCCGGCCACCGG | + |
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Preference number: 4 (lower is better) Translates to: VCSEKAIVRTRGAQFPGCSLGCW*CLAGHR Trigger: CCGGTGGCCGGCGAGGCACCACCAGCAGCCCAGACT...ACAACCTGGAAATTGGGCACCGCGTGTTCGGACAATTGCTTTTTCGCTGCACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | CTCCTACTATCGGTAGTGTGCAGCGAAAAAGCAATTGTCCGAACACGCGGTGCCGTAGGGGAGGCTGGTTaGGACGAGCGGGGCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LLLSVVCSEKAIVRTRGAVGEAG*DERGAG Trigger: TCCTGCGCCCCGCTCGTCCCAACCAGCCTCCCCTAC...GGCACCGCGTGTTCGGACAATTGCTTTTTCGCTGCACACTACCGATAGTAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | GGTTTGGGGAGAAACGGGAGTGGCAGTATGATGCTGGAGAAAGACTGGAATTTGTCCCGGGGCGCCTCCTaGGGGACCGTAGTCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GLGRNGSGSMMLEKDWNLSRGAS*GTVVWA Trigger: AGCCCAGACTACGGTCCCCCAGGAGGCGCCCCGGGA...CAAATTCCAGTCTTTCTCCAGCATCATACTGCCACTCCCGTTTCTCCCCAAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | GGTTTGGGGAGAAACGGGAGTGGCAGTATGATGCTGGAGAAAGACTGGAATTTGCGTAGTCTGGGCTGCTaGTGGTGCCTCGCCGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GLGRNGSGSMMLEKDWNLRSLGC*WCLAGH Trigger: GTGGCCGGCGAGGCACCACCAGCAGCCCAGACTACG...CAAATTCCAGTCTTTCTCCAGCATCATACTGCCACTCCCGTTTCTCCCCAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR GCA 90 bp | CATCTCCTACTATCGGTAGTGTGCAGCGAAAAAGCAATTGTCCGAACACGCGGTGGGGGTGGGGGTCTATaGCTGGAACAGGCGTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: HLLLSVVCSEKAIVRTRGGGGGL*LEQASP Trigger: CGGAGACGCCTGTTCCAGGCATAGACCCCCACCCCC...ACCGCGTGTTCGGACAATTGCTTTTTCGCTGCACACTACCGATAGTAGGAGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR GCA 90 bp | AGGAAGAAGCAACATACAGTCTTGTATAGTAAGCATACTATTTGGCAGTTTCCTCTGGGCTGCTGGTGGTaGCTCGCCGGCCACCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: RKKQHTVLYSKHTIWQFPLGCWW*LAGHRA Trigger: AGCCCGGTGGCCGGCGAGGCACCACCAGCAGCCCAG...AGGAAACTGCCAAATAGTATGCTTACTATACAAGACTGTATGTTGCTTCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | GTGTGCAGCGAAAAAGCAATTGTCCGAACACGCGGTGCCCAATTTCCAGGTTGTGGGGAGAAACGGGAGTaGCAGTATGATGCTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: VCSEKAIVRTRGAQFPGCGEKRE*QYDAGE Trigger: TTCTCCAGCATCATACTGCCACTCCCGTTTCTCCCC...ACAACCTGGAAATTGGGCACCGCGTGTTCGGACAATTGCTTTTTCGCTGCACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR TCA 90 bp | GGTTTGGGGAGAAACGGGAGTGGCAGTATGATGCTGGAGAAAGACTGGAATTTGACGGGAGTGGCAGTATaGTGCTGGAGAAAGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: GLGRNGSGSMMLEKDWNLTGVAV*CWRKTG Trigger: TCCAGTCTTTCTCCAGCATCATACTGCCACTCCCGT...CAAATTCCAGTCTTTCTCCAGCATCATACTGCCACTCCCGTTTCTCCCCAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR GCA 90 bp | CATCTCCTACTATCGGTAGTGTGCAGCGAAAAAGCAATTGTCCGAACACGCGGTTGTCCGAACACGCGGTaGCCAATTTCCAGGTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: HLLLSVVCSEKAIVRTRGCPNTR*PISRLL Trigger: CAACAACCTGGAAATTGGGCACCGCGTGTTCGGACA...ACCGCGTGTTCGGACAATTGCTTTTTCGCTGCACACTACCGATAGTAGGAGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | TCATCTCCTACTATCGGTAGTGTGCAGCGAAAAAGCAATTGTCCGAACACGCGGATTGTTGTGTGTACGTaGGGGTGGGGGTCTATGCCT | + |
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Preference number: 4 (lower is better) Translates to: SSPTIGSVQRKSNCPNTRIVVCT*GWGSMP Trigger: AGGCATAGACCCCCACCCCCACGTACACACAACAAT...CCGCGTGTTCGGACAATTGCTTTTTCGCTGCACACTACCGATAGTAGGAGATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | GCGAAAAAGCAATTGTCCGAACACGCGGTGCCCAATTTCCAGGTTGTTGGATACGGTGATTTCTTGGTTTaGGGAGAAACGGGAGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: AKKQLSEHAVPNFQVVGYGDFLV*GETGVA Trigger: TGCCACTCCCGTTTCTCCCCAAACCAAGAAATCACC...GTATCCAACAACCTGGAAATTGGGCACCGCGTGTTCGGACAATTGCTTTTTCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR CAA 72 bp | AGCAATTGTCCGAACACGCGGTGCCCAATTTCCAGGTaGTTGGATACTCAATGTGAGAGATTCCCGCAATCC | + |
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Preference number: 4 (lower is better) Translates to: SNCPNTRCPISR*LDTQCERFPQS Trigger: GGATTGCGGGAATCTCTCACATTGAGTATCCAACAACCTGGAAATTGGGCACCGCGTGTTCGGACAATTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR GCA 90 bp | AAATCTGGACACATTTTCTGGTATCCTTGCGCAGATTTTCTATTTAAAGATGAGGACCGTAGTCTGGGCTaGTGGTGGTGCCTCGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: KSGHIFWYPCADFLFKDEDRSLG*WWCLAG Trigger: GCCGGCGAGGCACCACCAGCAGCCCAGACTACGGTC...CTCATCTTTAAATAGAAAATCTGCGCAAGGATACCAGAAAATGTGTCCAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | CTCCTACTATCGGTAGTGTGCAGCGAAAAAGCAATTGTCCGAACACGCGGTGCCATTTGGCAGTTTCCTTaGAGAGCAGTTGGAAAAACC | + |
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Preference number: 4 (lower is better) Translates to: LLLSVVCSEKAIVRTRGAIWQFP*RAVGKT Trigger: GGTTTTTCCAACTGCTCTCCAAGGAAACTGCCAAAT...GGCACCGCGTGTTCGGACAATTGCTTTTTCGCTGCACACTACCGATAGTAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | CTTGCGCAGATTTTCTATTTAAAGATGAGGTCTAGAATATACCTTTTCTTGCTGTGGGGGACCGTAGTCTaGGCTGCTGGTGGTGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: LAQIFYLKMRSRIYLFLLWGTVV*AAGGAS Trigger: CGAGGCACCACCAGCAGCCCAGACTACGGTCCCCCA...CAGCAAGAAAAGGTATATTCTAGACCTCATCTTTAAATAGAAAATCTGCGCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | CTTGCGCAGATTTTCTATTTAAAGATGAGGTCTAGAATATACCTTTTCTTGCTGGTGGGGGTCTATGCCTaGAACAGGCGTCTCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LAQIFYLKMRSRIYLFLLVGVYA*NRRLRA Trigger: GGCCCGGAGACGCCTGTTCCAGGCATAGACCCCCAC...CAGCAAGAAAAGGTATATTCTAGACCTCATCTTTAAATAGAAAATCTGCGCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR TCA 90 bp | CATCTCCTACTATCGGTAGTGTGCAGCGAAAAAGCAATTGTCCGAACACGCGGTTATACCTTTTCTTGCTaGCGTCTTCATCTCCTACTA | + |
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Preference number: 4 (lower is better) Translates to: HLLLSVVCSEKAIVRTRGYTFSC*RLHLLL Trigger: TAGTAGGAGATGAAGACGTCAGCAAGAAAAGGTATA...ACCGCGTGTTCGGACAATTGCTTTTTCGCTGCACACTACCGATAGTAGGAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | CTAGGAAGAAGCAACATACAGTCTTGTATAGTAAGCATACTATTTGGCAGTTTCGTGTGTACGTGGGGGTaGGGGTCTATGCCTGGAACA | + |
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Preference number: 4 (lower is better) Translates to: LGRSNIQSCIVSILFGSFVCTWG*GSMPGT Trigger: TGTTCCAGGCATAGACCCCCACCCCCACGTACACAC...GAAACTGCCAAATAGTATGCTTACTATACAAGACTGTATGTTGCTTCTTCCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | GTGTGCAGCGAAAAAGCAATTGTCCGAACACGCGGTGCCCAATTTCCAGGTTGTCAATTTCCAGGTTGTTaGATACTCAATGTGAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: VCSEKAIVRTRGAQFPGCQFPGC*ILNVRD Trigger: ATCTCTCACATTGAGTATCCAACAACCTGGAAATTG...ACAACCTGGAAATTGGGCACCGCGTGTTCGGACAATTGCTTTTTCGCTGCACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | ACGCGGTGCCCAATTTCCAGGTTGTTGGATACTCAATGTGAGAGATTCCCGCAATCTGGACACATTTTCTaGTATCCTTGCGCAGATTTT | + |
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Preference number: 4 (lower is better) Translates to: TRCPISRLLDTQCERFPQSGHIF*YPCADF Trigger: AAAATCTGCGCAAGGATACCAGAAAATGTGTCCAGA...TTGCGGGAATCTCTCACATTGAGTATCCAACAACCTGGAAATTGGGCACCGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | CAACGTAAGAGATCTGGTGATTTCTTGGTTTGGGGAGAAACGGGAGTGGCAGTAAGAAGCCCAGAAATCTaGACACATTTTCTGGTATCC | + |
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Preference number: 4 (lower is better) Translates to: QRKRSGDFLVWGETGVAVRSPEI*THFLVS Trigger: GGATACCAGAAAATGTGTCCAGATTTCTGGGCTTCT...TACTGCCACTCCCGTTTCTCCCCAAACCAAGAAATCACCAGATCTCTTACGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR TCA 90 bp | GCGAAAAAGCAATTGTCCGAACACGCGGTGCCCAATTTCCAGGTTGTTGGATACACACTTTCCATTGGGTaGAATCACCAGATTAACAAA | + |
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Preference number: 4 (lower is better) Translates to: AKKQLSEHAVPNFQVVGYTLSIG*NHQINK Trigger: TTTGTTAATCTGGTGATTTCACCCAATGGAAAGTGT...GTATCCAACAACCTGGAAATTGGGCACCGCGTGTTCGGACAATTGCTTTTTCGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR TCA 90 bp | CAGGATAAGGGGTTCCTAGGAAGAAGCAACATACAGTCTTGTATAGTAAGCATAGTTGGATACTCAATGTaGGAGATTCCCGCAATCCTA | + |
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Preference number: 4 (lower is better) Translates to: QDKGFLGRSNIQSCIVSIVGYSM*EIPAIL Trigger: TAGGATTGCGGGAATCTCTCACATTGAGTATCCAAC...TATGCTTACTATACAAGACTGTATGTTGCTTCTTCCTAGGAACCCCTTATCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CCA 90 bp | AGGAAGAAGCAACATACAGTCTTGTATAGTAAGCATACTATTTGGCAGTTTCCTGATCTGGTGATTTCTTaGTTTGGGGAGAAACGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RKKQHTVLYSKHTIWQFPDLVIS*FGEKRE Trigger: CTCCCGTTTCTCCCCAAACCAAGAAATCACCAGATC...AGGAAACTGCCAAATAGTATGCTTACTATACAAGACTGTATGTTGCTTCTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| 3UTR CAA 72 bp | TTCTATTTAAAGATGAGGTCTAGAATATACCTTTTCTaGCTGACGTCTTCATCTCCTACTATCGGTAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: FYLKMRSRIYLF*LTSSSPTIGSV Trigger: CACACTACCGATAGTAGGAGATGAAGACGTCAGCAAGAAAAGGTATATTCTAGACCTCATCTTTAAATAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR TCA 90 bp | CTTGCGCAGATTTTCTATTTAAAGATGAGGTCTAGAATATACCTTTTCTTGCTGTTTGAGAGAAACAACTaGTGCAAAACGAGGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: LAQIFYLKMRSRIYLFLLFERNN*CKTREN Trigger: ATTCTCCCTCGTTTTGCATCAGTTGTTTCTCTCAAA...CAGCAAGAAAAGGTATATTCTAGACCTCATCTTTAAATAGAAAATCTGCGCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR TCA 90 bp | CTAGGAAGAAGCAACATACAGTCTTGTATAGTAAGCATACTATTTGGCAGTTTCAGAAAGACTGGAATTTaGGAGAAACAACTGATGCAA | + |
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Preference number: 4 (lower is better) Translates to: LGRSNIQSCIVSILFGSFRKTGI*EKQLMQ Trigger: TTGCATCAGTTGTTTCTCTCAAATTCCAGTCTTTCT...GAAACTGCCAAATAGTATGCTTACTATACAAGACTGTATGTTGCTTCTTCCTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CAA 90 bp | CATCTCCTACTATCGGTAGTGTGCAGCGAAAAAGCAATTGTCCGAACACGCGGTGCAGAGCGGCCAGGATaGTTGTGTGTACGTGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: HLLLSVVCSEKAIVRTRGAERPG*LCVRGG Trigger: ACCCCCACGTACACACAACAATCCTGGCCGCTCTGC...ACCGCGTGTTCGGACAATTGCTTTTTCGCTGCACACTACCGATAGTAGGAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CAA 90 bp | ATATACCTTTTCTTGCTGACGTCTTCATCTCCTACTATCGGTAGTGTGCAGCGAGCAGCGAAAAAGCAATaGTCCGAACACGCGGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: IYLFLLTSSSPTIGSVQRAAKKQ*SEHAVP Trigger: GGGCACCGCGTGTTCGGACAATTGCTTTTTCGCTGC...TCGCTGCACACTACCGATAGTAGGAGATGAAGACGTCAGCAAGAAAAGGTATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CAA 90 bp | CAGGATAAGGGGTTCCTAGGAAGAAGCAACATACAGTCTTGTATAGTAAGCATAGCTCAGCTTAGCTCGTaGGACCCTTGGGCCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: QDKGFLGRSNIQSCIVSIAQLSS*DPWAFL Trigger: CAGGAAGGCCCAAGGGTCCAACGAGCTAAGCTGAGC...TATGCTTACTATACAAGACTGTATGTTGCTTCTTCCTAGGAACCCCTTATCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CAA 90 bp | TCATCTCCTACTATCGGTAGTGTGCAGCGAAAAAGCAATTGTCCGAACACGCGGAGATCTGGTGATTTCTaGGTTTGGGGAGAAACGGGA | + |
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Preference number: 5 (lower is better) Translates to: SSPTIGSVQRKSNCPNTRRSGDF*VWGETG Trigger: TCCCGTTTCTCCCCAAACCAAGAAATCACCAGATCT...CCGCGTGTTCGGACAATTGCTTTTTCGCTGCACACTACCGATAGTAGGAGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CAA 90 bp | CTACTATCGGTAGTGTGCAGCGAAAAAGCAATTGTCCGAACACGCGGTGCCCAATGCAAACACTTTCCATaGGGTGAAATCACCAGATTA | + |
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Preference number: 5 (lower is better) Translates to: LLSVVCSEKAIVRTRGAQCKHFP*GEITRL Trigger: TAATCTGGTGATTTCACCCAATGGAAAGTGTTTGCA...TTGGGCACCGCGTGTTCGGACAATTGCTTTTTCGCTGCACACTACCGATAGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CAA 90 bp | AAACGAGGGAGAATGAAGGGATCTGAATATGACCTTGTAAAGAAGCCCAGAAATCCAATTTCCAGGTTGTaGGATACTCAATGTGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: KRGRMKGSEYDLVKKPRNPISRL*DTQCER Trigger: TCTCTCACATTGAGTATCCAACAACCTGGAAATTGG...ATTTCTGGGCTTCTTTACAAGGTCATATTCAGATCCCTTCATTCTCCCTCGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CAA 90 bp | CTTGCGCAGATTTTCTATTTAAAGATGAGGTCTAGAATATACCTTTTCTTGCTGTGCCCAATTTCCAGGTaGTTGGATACTCAATGTGAG | + |
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Preference number: 5 (lower is better) Translates to: LAQIFYLKMRSRIYLFLLCPISR*LDTQCE Trigger: CTCACATTGAGTATCCAACAACCTGGAAATTGGGCA...CAGCAAGAAAAGGTATATTCTAGACCTCATCTTTAAATAGAAAATCTGCGCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS-3UTR CAA 90 bp | AGGAAGAAGCAACATACAGTCTTGTATAGTAAGCATACTATTTGGCAGTTTCCTAGAATATACCTTTTCTaGCTGACGTCTTCATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: RKKQHTVLYSKHTIWQFPRIYLF*LTSSSP Trigger: AGGAGATGAAGACGTCAGCAAGAAAAGGTATATTCT...AGGAAACTGCCAAATAGTATGCTTACTATACAAGACTGTATGTTGCTTCTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS GCA 72 bp | CTCCCGGGGCGCCTCCTGGGGGACCGTAGTCTGGGCTaGTGGTGGTGCCTCGCCGGCCACCGGGCTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LPGRLLGDRSLG*WWCLAGHRAQL Trigger: AAGCTGAGCCCGGTGGCCGGCGAGGCACCACCAGCAGCCCAGACTACGGTCCCCCAGGAGGCGCCCCGGGAG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS CCA 72 bp | GGGCGCCTCCTGGGGGACCGTAGTCTGGGCTGCTGGTaGTGCCTCGCCGGCCACCGGGCTCAGCTTAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: GRLLGDRSLGCW*CLAGHRAQLSS Trigger: CGAGCTAAGCTGAGCCCGGTGGCCGGCGAGGCACCACCAGCAGCCCAGACTACGGTCCCCCAGGAGGCGCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS GCA 72 bp | CGCCTCCTGGGGGACCGTAGTCTGGGCTGCTGGTGGTaGCTCGCCGGCCACCGGGCTCAGCTTAGCTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: RLLGDRSLGCWW*LAGHRAQLSSL Trigger: CAACGAGCTAAGCTGAGCCCGGTGGCCGGCGAGGCACCACCAGCAGCCCAGACTACGGTCCCCCAGGAGGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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| CDS CAA 90 bp | GATTCCCGCAATCCTAGAGGGCCTCCAGCAGAGCGGCCAGGATTGTaGTGTGTACGTGGGGGTGGGGGTCTATGCCTGGAACAGGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: DSRNPRGPPAERPGL*CVRGGGGLCLEQAS Trigger: AGACGCCTGTTCCAGGCATAGACCCCCACCCCCACGTACACACAACAATCCTGGCCGCTCTGCTGGAGGCCCTCTAGGATTGCGGGAATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000329447.5 |
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