Pregenerated sensors for PRR23A (Homo sapiens)
Ensembl gene IDs: ENSG00000206260Ensembl transcript IDs: ENST00000383163.4
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGATGCTGCATTTCCGGGCTGTGGCAAGTCCTCACAGTGAGTCTTaGAGGATCCACAAGAACCCGCAGCCGGTGGCAAGGGATTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: KMLHFRAVASPHSES*RIHKNPQPVARDCG Trigger: CCCACAATCCCTTGCCACCGGCTGCGGGTTCTTGTGGATCCTCCAAGACTCACTGTGAGGACTTGCCACAGCCCGGAAATGCAGCATCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR TCA 90 bp | ATGAATGAAGATGCTGCATTTCCGGGCTGTGGCAAGTCCTCACAGTaGGTCTTGGAGGATCCACAAGAACCCGCAGCCGGTGGCAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: MNEDAAFPGCGKSSQ*VLEDPQEPAAGGKG Trigger: TCCCTTGCCACCGGCTGCGGGTTCTTGTGGATCCTCCAAGACTCACTGTGAGGACTTGCCACAGCCCGGAAATGCAGCATCTTCATTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR TCA 90 bp | CAACCCACCCAAACAACAGTAATCCAACTGCCCGCTGTCGATGAATaGAGATGCTGCATTTCCGGGCTGTGGCAAGTCCTCACAGTGAGT | + |
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Preference number: 1 (lower is better) Translates to: QPTQTTVIQLPAVDE*RCCISGLWQVLTVS Trigger: ACTCACTGTGAGGACTTGCCACAGCCCGGAAATGCAGCATCTTCATTCATCGACAGCGGGCAGTTGGATTACTGTTGTTTGGGTGGGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR TCA 90 bp | CAACCAACCCACCCAAACAACAGTAATCCAACTGCCCGCTGTCGATaGATGAAGATGCTGCATTTCCGGGCTGTGGCAAGTCCTCACAGT | + |
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Preference number: 1 (lower is better) Translates to: QPTHPNNSNPTARCR*MKMLHFRAVASPHS Trigger: ACTGTGAGGACTTGCCACAGCCCGGAAATGCAGCATCTTCATTCATCGACAGCGGGCAGTTGGATTACTGTTGTTTGGGTGGGTTGGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR TCA 90 bp | AGAAGTAACAGCTCCTGCAGCAAAGGCAAGGGATCTGAAAATCCATaGCTGGTTATGTGTGGTCTACTCTTCTTGGTAAAGGTGCTTACC | + |
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Preference number: 1 (lower is better) Translates to: RSNSSCSKGKGSENP*LVMCGLLFLVKVLT Trigger: GGTAAGCACCTTTACCAAGAAGAGTAGACCACACATAACCAGTCATGGATTTTCAGATCCCTTGCCTTTGCTGCAGGAGCTGTTACTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR GCA 90 bp | GAATACCCATTGGTTAAAGTACATAGAATATGTCATTGTACAAGATaGTGCTGGAATGAAAGTGTCACAACTTCCTACTTTCCCTCATTA | + |
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Preference number: 1 (lower is better) Translates to: EYPLVKVHRICHCTR*CWNESVTTSYFPSL Trigger: TAATGAGGGAAAGTAGGAAGTTGTGACACTTTCATTCCAGCAGCATCTTGTACAATGACATATTCTATGTACTTTAACCAATGGGTATTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR GCA 90 bp | TACCCATTGGTTAAAGTACATAGAATATGTCATTGTACAAGATGCTaGTGGAATGAAAGTGTCACAACTTCCTACTTTCCCTCATTAAAT | + |
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Preference number: 1 (lower is better) Translates to: YPLVKVHRICHCTRC*WNESVTTSYFPSLN Trigger: ATTTAATGAGGGAAAGTAGGAAGTTGTGACACTTTCATTCCAGCAGCATCTTGTACAATGACATATTCTATGTACTTTAACCAATGGGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR-3UTR CCA 90 bp | GACAAAGGCAGAAGTAACAGCTCCTGCAGCAAAGGCAAGGGATCTGAAAATCCAAGAACCCGCAGCCGGTaGCAAGGGATTGTGGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: DKGRSNSSCSKGKGSENPRTRSR*QGIVGS Trigger: GCTTCCCACAATCCCTTGCCACCGGCTGCGGGTTCT...TGGATTTTCAGATCCCTTGCCTTTGCTGCAGGAGCTGTTACTTCTGCCTTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR-3UTR TCA 90 bp | GCAGAAGTAACAGCTCCTGCAGCAAAGGCAAGGGATCTGAAAATCCATGACTGGCCCGCTGTCGATGAATaGAGATGCTGCATTTCCGGG | + |
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Preference number: 2 (lower is better) Translates to: AEVTAPAAKARDLKIHDWPAVDE*RCCISG Trigger: CCCGGAAATGCAGCATCTTCATTCATCGACAGCGGG...CCAGTCATGGATTTTCAGATCCCTTGCCTTTGCTGCAGGAGCTGTTACTTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR-3UTR TCA 90 bp | AAACTGAAGGGAGCTTTAAGCAAGAGTAGGGGTGAAACTGAGGATACAGTTGGCACTGCCCGCTGTCGATaGATGAAGATGCTGCATTTC | + |
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Preference number: 2 (lower is better) Translates to: KLKGALSKSRGETEDTVGTARCR*MKMLHF Trigger: GAAATGCAGCATCTTCATTCATCGACAGCGGGCAGT...GCCAACTGTATCCTCAGTTTCACCCCTACTCTTGCTTAAAGCTCCCTTCAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR-3UTR TCA 90 bp | TCGCGCCCGGCCCTTAAATTCTTATTTGCAGAAACACTTCCAAAAGGTCCAGTGGGATCTGAAAATCCATaGCTGGTTATGTGTGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: SRPALKFLFAETLPKGPVGSENP*LVMCGL Trigger: TAGACCACACATAACCAGTCATGGATTTTCAGATCC...CACTGGACCTTTTGGAAGTGTTTCTGCAAATAAGAATTTAAGGGCCGGGCGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCTGGAATGAAAGTGTCACAACTTCCTACTTTCCCTCATTAAATATTGCTCTAGTCTCGAACTCCTaGCTGCAGGTGATCCACACG | + |
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Preference number: 2 (lower is better) Translates to: CCWNESVTTSYFPSLNIALVSNS*LQVIHT Trigger: CGTGTGGATCACCTGCAGTCAGGAGTTCGAGACTAG...AGCAATATTTAATGAGGGAAAGTAGGAAGTTGTGACACTTTCATTCCAGCAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR-3UTR TCA 90 bp | CCACACTGCCCTGAAATTCAGGAATACCCATTGGTTAAAGTACATAGAATATGTGGCAAGTCCTCACAGTaGGTCTTGGAGGATCCACAA | + |
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Preference number: 2 (lower is better) Translates to: PHCPEIQEYPLVKVHRICGKSSQ*VLEDPQ Trigger: TTGTGGATCCTCCAAGACTCACTGTGAGGACTTGCC...ACATATTCTATGTACTTTAACCAATGGGTATTCCTGAATTTCAGGGCAGTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR-3UTR CCA 90 bp | CCACACTGCCCTGAAATTCAGGAATACCCATTGGTTAAAGTACATAGAATATGTCCTCACAGTGAGTCTTaGAGGATCCACAAGAACCCG | + |
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Preference number: 2 (lower is better) Translates to: PHCPEIQEYPLVKVHRICPHSES*RIHKNP Trigger: CGGGTTCTTGTGGATCCTCCAAGACTCACTGTGAGG...ACATATTCTATGTACTTTAACCAATGGGTATTCCTGAATTTCAGGGCAGTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR-3UTR CCA 90 bp | CCACACTGCCCTGAAATTCAGGAATACCCATTGGTTAAAGTACATAGAATATGTTGCATTTCCGGGCTGTaGCAAGTCCTCACAGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: PHCPEIQEYPLVKVHRICCISGL*QVLTVS Trigger: ACTCACTGTGAGGACTTGCCACAGCCCGGAAATGCA...ACATATTCTATGTACTTTAACCAATGGGTATTCCTGAATTTCAGGGCAGTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGAGCAAGTGGAAAATAAAATCAGTGGTCAGAAGCACCTCAGAGGATGTTTTTCATGTCCTTGCCTaGCACTTACCAAGGAATTCT | + |
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Preference number: 2 (lower is better) Translates to: KESKWKIKSVVRSTSEDVFHVLA*HLPRNS Trigger: AGAATTCCTTGGTAAGTGGCAGGCAAGGACATGAAA...AACATCCTCTGAGGTGCTTCTGACCACTGATTTTATTTTCCACTTGCTCTCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR-3UTR CCA 90 bp | TGTACAAGATGCTGCTGGAATGAAAGTGTCACAACTTCCTACTTTCCCTCATTACTGAAAATCCATGACTaGTTATGTGTGGTCTACTCT | + |
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Preference number: 2 (lower is better) Translates to: CTRCCWNESVTTSYFPSLLKIHD*LCVVYS Trigger: AGAGTAGACCACACATAACCAGTCATGGATTTTCAG...TAATGAGGGAAAGTAGGAAGTTGTGACACTTTCATTCCAGCAGCATCTTGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR CCA 72 bp | CATTTCCGGGCTGTGGCAAGTCCTCACAGTGAGTCTTaGAGGATCCACAAGAACCCGCAGCCGGTGGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: HFRAVASPHSES*RIHKNPQPVAR Trigger: CCTTGCCACCGGCTGCGGGTTCTTGTGGATCCTCCAAGACTCACTGTGAGGACTTGCCACAGCCCGGAAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR TCA 72 bp | GATGCTGCATTTCCGGGCTGTGGCAAGTCCTCACAGTaGGTCTTGGAGGATCCACAAGAACCCGCAGCCGGT | + |
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Preference number: 3 (lower is better) Translates to: DAAFPGCGKSSQ*VLEDPQEPAAG Trigger: ACCGGCTGCGGGTTCTTGTGGATCCTCCAAGACTCACTGTGAGGACTTGCCACAGCCCGGAAATGCAGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR-3UTR CAA 90 bp | ACTCCTCCTGCCTCATCCCTGCTAGTAGCTGGGATTACAGGCACACGCCACCATTGTGGTCTACTCTTCTaGGTAAAGGTGCTTACCAGA | + |
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Preference number: 3 (lower is better) Translates to: TPPASSLLVAGITGTRHHCGLLF*VKVLTR Trigger: TCTGGTAAGCACCTTTACCAAGAAGAGTAGACCACA...ATGGTGGCGTGTGCCTGTAATCCCAGCTACTAGCAGGGATGAGGCAGGAGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR TCA 72 bp | CAAACAACAGTAATCCAACTGCCCGCTGTCGATGAATaGAGATGCTGCATTTCCGGGCTGTGGCAAGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: QTTVIQLPAVDE*RCCISGLWQVL Trigger: GAGGACTTGCCACAGCCCGGAAATGCAGCATCTTCATTCATCGACAGCGGGCAGTTGGATTACTGTTGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR TCA 72 bp | CACCCAAACAACAGTAATCCAACTGCCCGCTGTCGATaGATGAAGATGCTGCATTTCCGGGCTGTGGCAAGT | + |
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Preference number: 3 (lower is better) Translates to: HPNNSNPTARCR*MKMLHFRAVAS Trigger: ACTTGCCACAGCCCGGAAATGCAGCATCTTCATTCATCGACAGCGGGCAGTTGGATTACTGTTGTTTGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR TCA 72 bp | AGCTCCTGCAGCAAAGGCAAGGGATCTGAAAATCCATaGCTGGTTATGTGTGGTCTACTCTTCTTGGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: SSCSKGKGSENP*LVMCGLLFLVK Trigger: CTTTACCAAGAAGAGTAGACCACACATAACCAGTCATGGATTTTCAGATCCCTTGCCTTTGCTGCAGGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| 3UTR TCA 72 bp | ATATTGACTAGAATGATATCCATCAACTTTGTGTCATaGTGTGAATCCCCTGGGAATGGGGGAGAAGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: ILTRMISINFVS*CESPGNGGEEW Trigger: CCACTCTTCTCCCCCATTCCCAGGGGATTCACATCATGACACAAAGTTGATGGATATCATTCTAGTCAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR CCA 90 bp | CCTCACAGTGAGTCTTGGAGGATCCACAAGAACCCGCAGCCGGTGGCAAGGGATAGAACCCGCAGCCGGTaGCAAGGGATTGTGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PHSESWRIHKNPQPVARDRTRSR*QGIVGS Trigger: GCTTCCCACAATCCCTTGCCACCGGCTGCGGGTTCT...ATCCCTTGCCACCGGCTGCGGGTTCTTGTGGATCCTCCAAGACTCACTGTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR CCA 90 bp | CCTCACAGTGAGTCTTGGAGGATCCACAAGAACCCGCAGCCGGTGGCAAGGGATTGCATTTCCGGGCTGTaGCAAGTCCTCACAGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: PHSESWRIHKNPQPVARDCISGL*QVLTVS Trigger: ACTCACTGTGAGGACTTGCCACAGCCCGGAAATGCA...ATCCCTTGCCACCGGCTGCGGGTTCTTGTGGATCCTCCAAGACTCACTGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR TCA 90 bp | CATTTCCGGGCTGTGGCAAGTCCTCACAGTGAGTCTTGGAGGATCCACAAGAACCCCGCTGTCGATGAATaGAGATGCTGCATTTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: HFRAVASPHSESWRIHKNPAVDE*RCCISG Trigger: CCCGGAAATGCAGCATCTTCATTCATCGACAGCGGG...GTTCTTGTGGATCCTCCAAGACTCACTGTGAGGACTTGCCACAGCCCGGAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR TCA 90 bp | GACAAAGGCAGAAGTAACAGCTCCTGCAGCAAAGGCAAGGGATCTGAAAATCCAACTCCTGACTGCAGGTaGTCCACACGCCTCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: DKGRSNSSCSKGKGSENPTPDCR*STRLGL Trigger: GAGGCCGAGGCGTGTGGATCACCTGCAGTCAGGAGT...TGGATTTTCAGATCCCTTGCCTTTGCTGCAGGAGCTGTTACTTCTGCCTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR TCA 90 bp | CCTCACAGTGAGTCTTGGAGGATCCACAAGAACCCGCAGCCGGTGGCAAGGGATGTGAGTGAGTACCCCTaGGAGGAAATCAAGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: PHSESWRIHKNPQPVARDVSEYP*EEIKMK Trigger: CTTCATCTTGATTTCCTCTCAGGGGTACTCACTCAC...ATCCCTTGCCACCGGCTGCGGGTTCTTGTGGATCCTCCAAGACTCACTGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR CCA 90 bp | GGTTCAAGCACTCCTCCTGCCTCATCCCTGCTAGTAGCTGGGATTACAGGCACAATCCCTGCTAGTAGCTaGGATTACAGGCACACGCCA | + |
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Preference number: 4 (lower is better) Translates to: GSSTPPASSLLVAGITGTIPASS*DYRHTP Trigger: TGGCGTGTGCCTGTAATCCCAGCTACTAGCAGGGAT...TGTGCCTGTAATCCCAGCTACTAGCAGGGATGAGGCAGGAGGAGTGCTTGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR TCA 90 bp | GGTTCAAGCACTCCTCCTGCCTCATCCCTGCTAGTAGCTGGGATTACAGGCACAGAGAGGAAATCAAGATaGAGCCCACACTGCCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: GSSTPPASSLLVAGITGTERKSR*SPHCPE Trigger: TTCAGGGCAGTGTGGGCTTCATCTTGATTTCCTCTC...TGTGCCTGTAATCCCAGCTACTAGCAGGGATGAGGCAGGAGGAGTGCTTGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR GCA 90 bp | CATTTCCGGGCTGTGGCAAGTCCTCACAGTGAGTCTTGGAGGATCCACAAGAACTTCAAGCACTCCTCCTaGCTCATCCCTGCTAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: HFRAVASPHSESWRIHKNFKHSS*LIPASS Trigger: GCTACTAGCAGGGATGAGGCAGGAGGAGTGCTTGAA...GTTCTTGTGGATCCTCCAAGACTCACTGTGAGGACTTGCCACAGCCCGGAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR CCA 90 bp | TGGCAAGTCCTCACAGTGAGTCTTGGAGGATCCACAAGAACCCGCAGCCGGTGGGACAATGATCTGGATTaGAGAGAACGGATAGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: WQVLTVSLGGSTRTRSRWDNDLD*RERIGV Trigger: TACACCTATCCGTTCTCTCCAATCCAGATCATTGTC...CCACCGGCTGCGGGTTCTTGTGGATCCTCCAAGACTCACTGTGAGGACTTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR TCA 90 bp | ACTCCTCCTGCCTCATCCCTGCTAGTAGCTGGGATTACAGGCACACGCCACCATATCAACTTTGTGTCATaGTGTGAATCCCCTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: TPPASSLLVAGITGTRHHINFVS*CESPGN Trigger: ATTCCCAGGGGATTCACATCATGACACAAAGTTGAT...ATGGTGGCGTGTGCCTGTAATCCCAGCTACTAGCAGGGATGAGGCAGGAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR GCA 90 bp | AAACTGAAGGGAGCTTTAAGCAAGAGTAGGGGTGAAACTGAGGATACAGTTGGCTTGCCCAGGCTGGAGTaGAATGGCACGATCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: KLKGALSKSRGETEDTVGLPRLE*NGTISA Trigger: AGCCGAGATCGTGCCATTGCACTCCAGCCTGGGCAA...GCCAACTGTATCCTCAGTTTCACCCCTACTCTTGCTTAAAGCTCCCTTCAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR GCA 90 bp | CCTCACAGTGAGTCTTGGAGGATCCACAAGAACCCGCAGCCGGTGGCAAGGGATCATTGTACAAGATGCTaGTGGAATGAAAGTGTCACA | + |
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Preference number: 4 (lower is better) Translates to: PHSESWRIHKNPQPVARDHCTRC*WNESVT Trigger: TGTGACACTTTCATTCCAGCAGCATCTTGTACAATG...ATCCCTTGCCACCGGCTGCGGGTTCTTGTGGATCCTCCAAGACTCACTGTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR CCA 90 bp | TCGCGCCCGGCCCTTAAATTCTTATTTGCAGAAACACTTCCAAAAGGTCCAGTGGAAGCAGTTCATTCCTaGAACAGTCGTCTGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SRPALKFLFAETLPKGPVEAVHS*NSRLRA Trigger: GGCCCGCAGACGACTGTTCCAGGAATGAACTGCTTC...CACTGGACCTTTTGGAAGTGTTTCTGCAAATAAGAATTTAAGGGCCGGGCGCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR CCA 90 bp | GCAGAAGTAACAGCTCCTGCAGCAAAGGCAAGGGATCTGAAAATCCATGACTGGCCTCACAGTGAGTCTTaGAGGATCCACAAGAACCCG | + |
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Preference number: 4 (lower is better) Translates to: AEVTAPAAKARDLKIHDWPHSES*RIHKNP Trigger: CGGGTTCTTGTGGATCCTCCAAGACTCACTGTGAGG...CCAGTCATGGATTTTCAGATCCCTTGCCTTTGCTGCAGGAGCTGTTACTTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR TCA 90 bp | GCAGAAGTAACAGCTCCTGCAGCAAAGGCAAGGGATCTGAAAATCCATGACTGGACTGCCCGCTGTCGATaGATGAAGATGCTGCATTTC | + |
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Preference number: 4 (lower is better) Translates to: AEVTAPAAKARDLKIHDWTARCR*MKMLHF Trigger: GAAATGCAGCATCTTCATTCATCGACAGCGGGCAGT...CCAGTCATGGATTTTCAGATCCCTTGCCTTTGCTGCAGGAGCTGTTACTTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR CCA 90 bp | ACTCCTCCTGCCTCATCCCTGCTAGTAGCTGGGATTACAGGCACACGCCACCATCTGAAAATCCATGACTaGTTATGTGTGGTCTACTCT | + |
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Preference number: 4 (lower is better) Translates to: TPPASSLLVAGITGTRHHLKIHD*LCVVYS Trigger: AGAGTAGACCACACATAACCAGTCATGGATTTTCAG...ATGGTGGCGTGTGCCTGTAATCCCAGCTACTAGCAGGGATGAGGCAGGAGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR TCA 90 bp | CATTTCCGGGCTGTGGCAAGTCCTCACAGTGAGTCTTGGAGGATCCACAAGAACGGATCTGAAAATCCATaGCTGGTTATGTGTGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: HFRAVASPHSESWRIHKNGSENP*LVMCGL Trigger: TAGACCACACATAACCAGTCATGGATTTTCAGATCC...GTTCTTGTGGATCCTCCAAGACTCACTGTGAGGACTTGCCACAGCCCGGAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR CCA 90 bp | CATTTCCGGGCTGTGGCAAGTCCTCACAGTGAGTCTTGGAGGATCCACAAGAACTGTACAAGATGCTGCTaGAATGAAAGTGTCACAACT | + |
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Preference number: 4 (lower is better) Translates to: HFRAVASPHSESWRIHKNCTRCC*NESVTT Trigger: AGTTGTGACACTTTCATTCCAGCAGCATCTTGTACA...GTTCTTGTGGATCCTCCAAGACTCACTGTGAGGACTTGCCACAGCCCGGAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR TCA 90 bp | GTTATGTGTGGTCTACTCTTCTTGGTAAAGGTGCTTACCAGAATCTGCTTTTCTCTAGTCTCGAACTCCTaGCTGCAGGTGATCCACACG | + |
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Preference number: 4 (lower is better) Translates to: VMCGLLFLVKVLTRICFSLVSNS*LQVIHT Trigger: CGTGTGGATCACCTGCAGTCAGGAGTTCGAGACTAG...AGAAAAGCAGATTCTGGTAAGCACCTTTACCAAGAAGAGTAGACCACACATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR GCA 90 bp | GCAGAAGTAACAGCTCCTGCAGCAAAGGCAAGGGATCTGAAAATCCATGACTGGCTAAGAAATAACGACTaGCAATTCAGGGTGATGGAC | + |
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Preference number: 4 (lower is better) Translates to: AEVTAPAAKARDLKIHDWLRNND*QFRVMD Trigger: GTCCATCACCCTGAATTGGCAGTCGTTATTTCTTAG...CCAGTCATGGATTTTCAGATCCCTTGCCTTTGCTGCAGGAGCTGTTACTTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR TCA 90 bp | TGTACAAGATGCTGCTGGAATGAAAGTGTCACAACTTCCTACTTTCCCTCATTAGGCAAGTCCTCACAGTaGGTCTTGGAGGATCCACAA | + |
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Preference number: 4 (lower is better) Translates to: CTRCCWNESVTTSYFPSLGKSSQ*VLEDPQ Trigger: TTGTGGATCCTCCAAGACTCACTGTGAGGACTTGCC...TAATGAGGGAAAGTAGGAAGTTGTGACACTTTCATTCCAGCAGCATCTTGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR TCA 90 bp | TCGCGCCCGGCCCTTAAATTCTTATTTGCAGAAACACTTCCAAAAGGTCCAGTGAAGATGCTGCTGGAATaGAAGTGTCACAACTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: SRPALKFLFAETLPKGPVKMLLE*KCHNFL Trigger: TAGGAAGTTGTGACACTTTCATTCCAGCAGCATCTT...CACTGGACCTTTTGGAAGTGTTTCTGCAAATAAGAATTTAAGGGCCGGGCGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR TCA 90 bp | TGCTGCTGGAATGAAAGTGTCACAACTTCCTACTTTCCCTCATTAAATATTGCTTGCGGTGAAGGTGAGTaGGTACCCCTGAGAGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: CCWNESVTTSYFPSLNIACGEGE*VPLRGN Trigger: ATTTCCTCTCAGGGGTACTCACTCACCTTCACCGCA...AGCAATATTTAATGAGGGAAAGTAGGAAGTTGTGACACTTTCATTCCAGCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR TCA 90 bp | TCGCGCCCGGCCCTTAAATTCTTATTTGCAGAAACACTTCCAAAAGGTCCAGTGAATATGCATTTATCTTaGTTGTCCAGGTCCAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SRPALKFLFAETLPKGPVNMHLS*LSRSRK Trigger: TTTCCTGGACCTGGACAATCAAGATAAATGCATATT...CACTGGACCTTTTGGAAGTGTTTCTGCAAATAAGAATTTAAGGGCCGGGCGCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR TCA 90 bp | TGTACAAGATGCTGCTGGAATGAAAGTGTCACAACTTCCTACTTTCCCTCATTAAAGCCCACACTGCCCTaGAATTCAGGAATACCCATT | + |
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Preference number: 4 (lower is better) Translates to: CTRCCWNESVTTSYFPSLKPTLP*NSGIPI Trigger: AATGGGTATTCCTGAATTTCAGGGCAGTGTGGGCTT...TAATGAGGGAAAGTAGGAAGTTGTGACACTTTCATTCCAGCAGCATCTTGTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR TCA 90 bp | GTTATGTGTGGTCTACTCTTCTTGGTAAAGGTGCTTACCAGAATCTGCTTTTCTCAAAGGCAAGGGATCTaGAAATCCATGACTGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: VMCGLLFLVKVLTRICFSQRQGI*KSMTGY Trigger: ATAACCAGTCATGGATTTTCAGATCCCTTGCCTTTG...AGAAAAGCAGATTCTGGTAAGCACCTTTACCAAGAAGAGTAGACCACACATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR GCA 90 bp | AAGGAGAGCAAGTGGAAAATAAAATCAGTGGTCAGAAGCACCTCAGAGGATGTTTGTCATTGTACAAGATaGTGCTGGAATGAAAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: KESKWKIKSVVRSTSEDVCHCTR*CWNESV Trigger: GACACTTTCATTCCAGCAGCATCTTGTACAATGACA...AACATCCTCTGAGGTGCTTCTGACCACTGATTTTATTTTCCACTTGCTCTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR CCA 90 bp | TGCTGCTGGAATGAAAGTGTCACAACTTCCTACTTTCCCTCATTAAATATTGCTAATGGGGGAGAAGAGTaGGGATCAAAGGATATGACA | + |
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Preference number: 4 (lower is better) Translates to: CCWNESVTTSYFPSLNIANGGEE*GSKDMT Trigger: TGTCATATCCTTTGATCCCCACTCTTCTCCCCCATT...AGCAATATTTAATGAGGGAAAGTAGGAAGTTGTGACACTTTCATTCCAGCAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR GCA 90 bp | GAAGAGTGGGGATCAAAGGATATGACAACATTATCTGTAATATTTCCTTTCCTTTTTCATGTCCTTGCCTaGCACTTACCAAGGAATTCT | + |
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Preference number: 4 (lower is better) Translates to: EEWGSKDMTTLSVIFPFLFHVLA*HLPRNS Trigger: AGAATTCCTTGGTAAGTGGCAGGCAAGGACATGAAA...AAGGAAAGGAAATATTACAGATAATGTTGTCATATCCTTTGATCCCCACTCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR CAA 90 bp | GACAAAGGCAGAAGTAACAGCTCCTGCAGCAAAGGCAAGGGATCTGAAAATCCACGGAGTTTCGCCATGTaGGCCAGGCTAGTCTCGAAC | + |
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Preference number: 5 (lower is better) Translates to: DKGRSNSSCSKGKGSENPRSFAM*ARLVSN Trigger: GTTCGAGACTAGCCTGGCCAACATGGCGAAACTCCG...TGGATTTTCAGATCCCTTGCCTTTGCTGCAGGAGCTGTTACTTCTGCCTTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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| CDS-3UTR CAA 90 bp | TCGCGCCCGGCCCTTAAATTCTTATTTGCAGAAACACTTCCAAAAGGTCCAGTGTGTGGTCTACTCTTCTaGGTAAAGGTGCTTACCAGA | + |
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Preference number: 5 (lower is better) Translates to: SRPALKFLFAETLPKGPVCGLLF*VKVLTR Trigger: TCTGGTAAGCACCTTTACCAAGAAGAGTAGACCACA...CACTGGACCTTTTGGAAGTGTTTCTGCAAATAAGAATTTAAGGGCCGGGCGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000383163.4 |
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