Pregenerated sensors for PRR22 (Homo sapiens)
Ensembl gene IDs: ENSG00000212123Ensembl transcript IDs: ENST00000390672.2, ENST00000419421.3
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACAGCAGCTCCTCGGGCAGGCACAGCGAGCGGATGTCATCGGCTaGGTTCCCACCACTGCTGTCAGGCAGGGCCGGCCCAGGGACCTC | + |
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Preference number: 1 (lower is better) Translates to: GQQLLGQAQRADVIG*VPTTAVRQGRPRDL Trigger: GAGGTCCCTGGGCCGGCCCTGCCTGACAGCAGTGGTGGGAACTCAGCCGATGACATCCGCTCGCTGTGCCTGCCCGAGGAGCTGCTGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR GCA 90 bp | AGGCAGTGCCAAAGCTCTGGCCGTCTTGGGGGCCTTGGCCTTGCCTaGTCCCAGCAGGGCCCCCTCCTTGACCTCGGCCACCTTGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: RQCQSSGRLGGLGLA*SQQGPLLDLGHLEL Trigger: GAGCTCAAGGTGGCCGAGGTCAAGGAGGGGGCCCTGCTGGGAGCAGGCAAGGCCAAGGCCCCCAAGACGGCCAGAGCTTTGGCACTGCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR CCA 90 bp | CCCAGGGAAGTGGCCGAGGTGACCCTGGAGGTGGCTGTAGGCGTCTaGGGGCAGTGTGGGCTCTGCAGGCAGCGTGATGAGTACAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: PREVAEVTLEVAVGV*GQCGLCRQRDEYRG Trigger: CCCCCTGTACTCATCACGCTGCCTGCAGAGCCCACACTGCCCCCAGACGCCTACAGCCACCTCCAGGGTCACCTCGGCCACTTCCCTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR GCA 90 bp | GTGACCCTGGAGGTGGCTGTAGGCGTCTGGGGGCAGTGTGGGCTCTaGAGGCAGCGTGATGAGTACAGGGGGCGGCTTGTTCTCCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: VTLEVAVGVWGQCGL*RQRDEYRGRLVLLG Trigger: CCCAAGGAGAACAAGCCGCCCCCTGTACTCATCACGCTGCCTGCAGAGCCCACACTGCCCCCAGACGCCTACAGCCACCTCCAGGGTCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR CCA 90 bp | GGTCCACTCGATCCGATAGATGCGGGGGTCGAAGAAGCACCCGCATaGGGCCATCTGGAAACCTGTGGGCGGCAGGCGGGTGCCCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: GPLDPIDAGVEEAPA*GHLETCGRQAGALR Trigger: TCTCAGGGCACCCGCCTGCCGCCCACAGGTTTCCAGATGGCCCCATGCGGGTGCTTCTTCGACCCCCGCATCTATCGGATCGAGTGGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR CCA 90 bp | CGGCCCAGGGACCTCGCACAGGGTACCCTCAGGCTCAGAGGCGCCTaGCAGGCAGTCGAAGAGCTTCATGGCGTCCTCCAGCAGAACCTT | + |
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Preference number: 1 (lower is better) Translates to: RPRDLAQGTLRLRGA*QAVEELHGVLQQNL Trigger: AAGGTTCTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGCCTGAGGGTACCCTGTGCGAGGTCCCTGGGCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR CCA 90 bp | TGCTTGCTGCCAGCTTATACAGGGCTGACTGGCCCAGGTCGGGGGTaGTCCACTCGATCCGATAGATGCGGGGGTCGAAGAAGCACCCGC | + |
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Preference number: 1 (lower is better) Translates to: CLLPAYTGLTGPGRG*STRSDRCGGRRSTR Trigger: GCGGGTGCTTCTTCGACCCCCGCATCTATCGGATCGAGTGGACCACCCCCGACCTGGGCCAGTCAGCCCTGTATAAGCTGGCAGCAAGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR GCA 90 bp | GTCGAAGAGCTTCATGGCGTCCTCCAGCAGAACCTTGTCAGGCAGTaGCAAAGCTCTGGCCGTCTTGGGGGCCTTGGCCTTGCCTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: VEELHGVLQQNLVRQ*QSSGRLGGLGLACS Trigger: GGAGCAGGCAAGGCCAAGGCCCCCAAGACGGCCAGAGCTTTGGCACTGCCTGACAAGGTTCTGCTGGAGGACGCCATGAAGCTCTTCGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR CCA 90 bp | TACCCTCAGGCTCAGAGGCGCCTGGCAGGCAGTCGAAGAGCTTCATaGCGTCCTCCAGCAGAACCTTGTCAGGCAGTGCCAAAGCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: YPQAQRRLAGSRRAS*RPPAEPCQAVPKLW Trigger: CCAGAGCTTTGGCACTGCCTGACAAGGTTCTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGCCTGAGGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCCCCCTCCTTGACCTCGGCCACCTTGAGCTCGCTGAGGCCCGGTGGGTAGGCCCAGCCCAAGCCTaGGGGCCTGTTTGGGAGATG | + |
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Preference number: 2 (lower is better) Translates to: QGPLLDLGHLELAEARWVGPAQA*GPVWEM Trigger: CATCTCCCAAACAGGCCCCCAGGCTTGGGCTGGGCC...TACCCACCGGGCCTCAGCGAGCTCAAGGTGGCCGAGGTCAAGGAGGGGGCCCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTCCACGAAGGCGGCGGGCCCTGCGTCCCCCACAAAACCCAGAGCCTCTGGCAGCTTATACAGGGCTaGCTGGCCCAGGTCGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: QLHEGGGPCVPHKTQSLWQLIQG*LAQVGG Trigger: ACCCCCGACCTGGGCCAGTCAGCCCTGTATAAGCTG...CCAGAGGCTCTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTCGTGGAGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTGACCTCGGCCACCTTGAGCTCGCTGAGGCCCGGTGGGTACAGGGGCACGGGGCAGGGGCAAGATaGGCCTGCACACTCAAACCC | + |
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Preference number: 2 (lower is better) Translates to: LLDLGHLELAEARWVQGHGAGAR*ACTLKP Trigger: GGGTTTGAGTGTGCAGGCCCATCTTGCCCCTGCCCC...GTGCCCCTGTACCCACCGGGCCTCAGCGAGCTCAAGGTGGCCGAGGTCAAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTTATACAGGGCTGACTGGCCCAGGTCGGGGGTGGTCCACTCGATCCGATTGCCCTGAGAGCAGCTaGTGCCTGAGGGGCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: PAYTGLTGPGRGWSTRSDCPESS*CLRGPA Trigger: GGCTGGGCCCCTCAGGCAGCAGCTGCTCTCAGGGCA...ATCGGATCGAGTGGACCACCCCCGACCTGGGCCAGTCAGCCCTGTATAAGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGACAGCAGCTCCTCGGGCAGGCACAGCGAGCGGATGTCATCGGCTGAGTTCGAAGGCGGCGGGCCCTaGGTCCCCCACAAAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: KDSSSSGRHSERMSSAEFEGGGP*VPHKTQ Trigger: CTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTC...GAACTCAGCCGATGACATCCGCTCGCTGTGCCTGCCCGAGGAGCTGCTGTCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCCACGAAGGCGGCGGGCCCTGCGTCCCCCACAAAACCCAGAGCCTCTGGGGACGACATAGATATTaGTTTGGGGCCCTGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: QLHEGGGPCVPHKTQSLWGRHRY*FGALAG Trigger: CCCAGCCAGGGCCCCAAAGCAATATCTATGTCGTCC...CCAGAGGCTCTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTCGTGGAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGAGGCGCCTGGCAGGCAGTCGAAGAGCTTCATGGCGTCCTCCAGCAGAACCGCATGGGGCCATCTaGAAACCTGTGGGCGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: AQRRLAGSRRASWRPPAEPHGAI*KPVGGR Trigger: CCTGCCGCCCACAGGTTTCCAGATGGCCCCATGCGG...TTCTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCTCTGGCCCGGGGCCCTCAGGCGGGAAGTAGGGCAAGAGAAACTGGGGCCGAAGAAGCACCCGCATaGGGCCATCTGGAAACCTGT | + |
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Preference number: 2 (lower is better) Translates to: EPLARGPQAGSRARETGAEEAPA*GHLETC Trigger: ACAGGTTTCCAGATGGCCCCATGCGGGTGCTTCTTC...GGCCCCAGTTTCTCTTGCCCTACTTCCCGCCTGAGGGCCCCGGGCCAGAGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CCA 90 bp | CCCGGCTTTCCCTTCTTGGCCGTCGAGGCCTTTCTCTTGCCAGACAGAATGGGGAAAACCCAGAGCCTCTaGCCCGGGGCCCTCAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: PGFPFLAVEAFLLPDRMGKTQSL*PGALRR Trigger: CCGCCTGAGGGCCCCGGGCCAGAGGCTCTGGGTTTT...CCCCATTCTGTCTGGCAAGAGAAAGGCCTCGACGGCCAAGAAGGGAAAGCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR CAA 90 bp | CCTGGCAGGCAGTCGAAGAGCTTCATGGCGTCCTCCAGCAGAACCTaGTCAGGCAGTGCCAAAGCTCTGGCCGTCTTGGGGGCCTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: PGRQSKSFMASSSRT*SGSAKALAVLGALA Trigger: GGCCAAGGCCCCCAAGACGGCCAGAGCTTTGGCACTGCCTGACAAGGTTCTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTTATACAGGGCTGACTGGCCCAGGTCGGGGGTGGTCCACTCGATCCGATTCTGGGGGACCTGTGTaGAGCATGGGGAGCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: PAYTGLTGPGRGWSTRSDSGGPV*SMGSRG Trigger: GCCTCTGCTCCCCATGCTTCACACAGGTCCCCCAGA...ATCGGATCGAGTGGACCACCCCCGACCTGGGCCAGTCAGCCCTGTATAAGCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCGGCTGCTCCTCGTCGAGCGCCTTGAAGTTGAAGAAGTAGTCAACGTTGGACGGGCCCCACTGCCCTaGAGCTCCTTGACGGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GRLLLVERLEVEEVVNVGRAPLP*SSLTGK Trigger: CTTCCCCGTCAAGGAGCTGCAGGGCAGTGGGGCCCG...TCCAACGTTGACTACTTCTTCAACTTCAAGGCGCTCGACGAGGAGCAGCCGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTCAGAGGCGCCTGGCAGGCAGTCGAAGAGCTTCATGGCGTCCTCCAGCAGCTTTGGGGCCCTGGCTaGGTGATGGATGACACAGAG | + |
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Preference number: 2 (lower is better) Translates to: RLRGAWQAVEELHGVLQQLWGPG*VMDDTE Trigger: CTCTGTGTCATCCATCACCCAGCCAGGGCCCCAAAG...CTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGAGGCGCCTGGCAGGCAGTCGAAGAGCTTCATGGCGTCCTCCAGCAGAATTATACAGGGCTGACTaGCCCAGGTCGGGGGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: AQRRLAGSRRASWRPPAELYRAD*PRSGVV Trigger: GACCACCCCCGACCTGGGCCAGTCAGCCCTGTATAA...TTCTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGTCCAGGATCTCAGGCACGCTGTAGTCAAAGGACAGCAGCTCCTCGGGCAGGGGGCAAGATGGGCCTaGACACTCAAACCCACTCCC | + |
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Preference number: 2 (lower is better) Translates to: GVQDLRHAVVKGQQLLGQGARWA*TLKPTP Trigger: GGGAGTGGGTTTGAGTGTGCAGGCCCATCTTGCCCC...CTGCCCGAGGAGCTGCTGTCCTTTGACTACAGCGTGCCTGAGATCCTGGACACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CCA 90 bp | CGAGGCCTTTCTCTTGCCAGACAGAATGGGGGCCGGGGTGTTGGTGGCAGGGGGTCTTTGGGGCTCATCTaGGGGACCTGTGTGAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: RGLSLARQNGGRGVGGRGSLGLI*GTCVKH Trigger: ATGCTTCACACAGGTCCCCCAGATGAGCCCCAAAGA...CCCCCTGCCACCAACACCCCGGCCCCCATTCTGTCTGGCAAGAGAAAGGCCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCGGCTGCTCCTCGTCGAGCGCCTTGAAGTTGAAGAAGTAGTCAACGTTGGACCATCTGGAAACCTGTaGGCGGCAGGCGGGTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GRLLLVERLEVEEVVNVGPSGNL*AAGGCP Trigger: AGGGCACCCGCCTGCCGCCCACAGGTTTCCAGATGG...TCCAACGTTGACTACTTCTTCAACTTCAAGGCGCTCGACGAGGAGCAGCCGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGGACACGGTGTCCAGGATCTCAGGCACGCTGTAGTCAAAGGACAGCAGCTCGGCCCAGGTCGGGGGTaGTCCACTCGATCCGATAGA | + |
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Preference number: 2 (lower is better) Translates to: VGHGVQDLRHAVVKGQQLGPGRG*STRSDR Trigger: TCTATCGGATCGAGTGGACCACCCCCGACCTGGGCC...GAGCTGCTGTCCTTTGACTACAGCGTGCCTGAGATCCTGGACACCGTGTCCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCGGCTGCTCCTCGTCGAGCGCCTTGAAGTTGAAGAAGTAGTCAACGTTGGAAAGCTCTGGCCGTCTTaGGGGCCTTGGCCTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: GRLLLVERLEVEEVVNVGKLWPS*GPWPCL Trigger: CAGGCAAGGCCAAGGCCCCCAAGACGGCCAGAGCTT...TCCAACGTTGACTACTTCTTCAACTTCAAGGCGCTCGACGAGGAGCAGCCGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR TCA 90 bp | TATACAGGGCTGACTGGCCCAGGTCGGGGGTGGTCCACTCGATCCGATAGATGCTGGCTGGGTGATGGATaGCACAGAGCTTGTCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: YTGLTGPGRGWSTRSDRCWLGDG*HRACLW Trigger: CCAAAGACAAGCTCTGTGTCATCCATCACCCAGCCA...GCATCTATCGGATCGAGTGGACCACCCCCGACCTGGGCCAGTCAGCCCTGTATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCGGCTGCTCCTCGTCGAGCGCCTTGAAGTTGAAGAAGTAGTCAACGTTGGAAGTCGAAGAGCTTCATaGCGTCCTCCAGCAGAACCT | + |
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Preference number: 2 (lower is better) Translates to: GRLLLVERLEVEEVVNVGSRRAS*RPPAEP Trigger: AGGTTCTGCTGGAGGACGCCATGAAGCTCTTCGACT...TCCAACGTTGACTACTTCTTCAACTTCAAGGCGCTCGACGAGGAGCAGCCGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR CCA 72 bp | CGAAGAAGCACCCGCATGGGGCCATCTGGAAACCTGTaGGCGGCAGGCGGGTGCCCTGAGAGCAGCTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: RRSTRMGPSGNL*AAGGCPESSCC Trigger: GCAGCAGCTGCTCTCAGGGCACCCGCCTGCCGCCCACAGGTTTCCAGATGGCCCCATGCGGGTGCTTCTTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCAGAGGCGCCTGGCAGGCAGTCGAAGAGCTTCATGGCGTCCTCCAGCAGAAAGCAGGGCCCCCTCCTaGACCTCGGCCACCTTGAGC | + |
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Preference number: 3 (lower is better) Translates to: AQRRLAGSRRASWRPPAESRAPS*TSATLS Trigger: GCTCAAGGTGGCCGAGGTCAAGGAGGGGGCCCTGCT...TTCTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR GCA 72 bp | GAGGTGGCTGTAGGCGTCTGGGGGCAGTGTGGGCTCTaGAGGCAGCGTGATGAGTACAGGGGGCGGCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: EVAVGVWGQCGL*RQRDEYRGRLV Trigger: AACAAGCCGCCCCCTGTACTCATCACGCTGCCTGCAGAGCCCACACTGCCCCCAGACGCCTACAGCCACCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR CCA 72 bp | GATCCGATAGATGCGGGGGTCGAAGAAGCACCCGCATaGGGCCATCTGGAAACCTGTGGGCGGCAGGCGGGT | + |
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Preference number: 3 (lower is better) Translates to: DPIDAGVEEAPA*GHLETCGRQAG Trigger: ACCCGCCTGCCGCCCACAGGTTTCCAGATGGCCCCATGCGGGTGCTTCTTCGACCCCCGCATCTATCGGATC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR CCA 72 bp | GACCTCGCACAGGGTACCCTCAGGCTCAGAGGCGCCTaGCAGGCAGTCGAAGAGCTTCATGGCGTCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: DLAQGTLRLRGA*QAVEELHGVLQ Trigger: CTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGCCTGAGGGTACCCTGTGCGAGGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCTTGACCTCGGCCACCTTGAGCTCGCTGAGGCCCGGTGGGTACAGGGGCACACACAGAGCTTGTCTTaGGGGCTCATCTGGGGGACC | + |
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Preference number: 3 (lower is better) Translates to: LLDLGHLELAEARWVQGHTQSLS*GLIWGT Trigger: GGTCCCCCAGATGAGCCCCAAAGACAAGCTCTGTGT...GTGCCCCTGTACCCACCGGGCCTCAGCGAGCTCAAGGTGGCCGAGGTCAAGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCTCAGAGGCGCCTGGCAGGCAGTCGAAGAGCTTCATGGCGTCCTCCAGCAGAAAGCTCTGGCCGTCTaGGGGGCCTTGGCCTTGCCT | + |
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Preference number: 3 (lower is better) Translates to: RLRGAWQAVEELHGVLQQKALAV*GALALP Trigger: AGGCAAGGCCAAGGCCCCCAAGACGGCCAGAGCTTT...CTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR GCA 72 bp | CCGGCTTTCCCTTCTTGGCCGTCGAGGCCTTTCTCTTaGCAGACAGAATGGGGGCCGGGGTGTTGGTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: PAFPSWPSRPFS*QTEWGPGCWWQ Trigger: CTGCCACCAACACCCCGGCCCCCATTCTGTCTGGCAAGAGAAAGGCCTCGACGGCCAAGAAGGGAAAGCCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCTCAGAGGCGCCTGGCAGGCAGTCGAAGAGCTTCATGGCGTCCTCCAGCAGAGCCTGGGGGCCTGTTaGGGAGATGCCACAAGAACC | + |
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Preference number: 3 (lower is better) Translates to: RLRGAWQAVEELHGVLQQSLGAC*GDATRT Trigger: GGTTCTTGTGGCATCTCCCAAACAGGCCCCCAGGCT...CTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCGGCTGCTCCTCGTCGAGCGCCTTGAAGTTGAAGAAGTAGTCAACGTTGGACTGCCCTGCAGCTCCTaGACGGGGAAGGCCAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: GRLLLVERLEVEEVVNVGLPCSS*TGKARG Trigger: ACCCCTGGCCTTCCCCGTCAAGGAGCTGCAGGGCAG...TCCAACGTTGACTACTTCTTCAACTTCAAGGCGCTCGACGAGGAGCAGCCGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR CCA 72 bp | CCAGCTTATACAGGGCTGACTGGCCCAGGTCGGGGGTaGTCCACTCGATCCGATAGATGCGGGGGTCGAAGA | + |
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Preference number: 3 (lower is better) Translates to: PAYTGLTGPGRG*STRSDRCGGRR Trigger: TCTTCGACCCCCGCATCTATCGGATCGAGTGGACCACCCCCGACCTGGGCCAGTCAGCCCTGTATAAGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR CCA 72 bp | CCGGCTGCCTGGCCTTCCTTCCCGGCTTTCCCTTCTTaGCCGTCGAGGCCTTTCTCTTGCCAGACAGAATGG | + |
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Preference number: 3 (lower is better) Translates to: PAAWPSFPAFPS*PSRPFSCQTEW Trigger: CCATTCTGTCTGGCAAGAGAAAGGCCTCGACGGCCAAGAAGGGAAAGCCGGGAAGGAAGGCCAGGCAGCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCAGAGGCGCCTGGCAGGCAGTCGAAGAGCTTCATGGCGTCCTCCAGCAGAAGACATAGATATTGCTTaGGGGCCCTGGCTGGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: AQRRLAGSRRASWRPPAEDIDIA*GPWLGD Trigger: ATCACCCAGCCAGGGCCCCAAAGCAATATCTATGTC...TTCTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR GCA 90 bp | CAGGGCCCCCTCCTTGACCTCGGCCACCTTGAGCTCGCTGAGGCCCGGTGGGTAGGCGCTGGCTGGGCCTaGCGGCTGCCTGGCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QGPLLDLGHLELAEARWVGAGWA*RLPGLP Trigger: AGGAAGGCCAGGCAGCCGGCAGGCCCAGCCAGCGCC...TACCCACCGGGCCTCAGCGAGCTCAAGGTGGCCGAGGTCAAGGAGGGGGCCCTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR CAA 72 bp | GCTCCCAGCAGGGCCCCCTCCTTGACCTCGGCCACCTaGAGCTCGCTGAGGCCCGGTGGGTACAGGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: APSRAPSLTSAT*SSLRPGGYRGT Trigger: GGTGCCCCTGTACCCACCGGGCCTCAGCGAGCTCAAGGTGGCCGAGGTCAAGGAGGGGGCCCTGCTGGGAGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR TCA 90 bp | GCAGCTCCACGAAGGCGGCGGGCCCTGCGTCCCCCACAAAACCCAGAGCCTCTGGCAGCCCCGGGGCCTTaGGGTAGGGCTGAGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: AAPRRRRALRPPQNPEPLAAPGP*GRAEAP Trigger: TGGAGCCTCAGCCCTACCTCAAGGCCCCGGGGCTGC...CAGAGGCTCTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTCGTGGAGCTGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR GCA 90 bp | GCTCCACGAAGGCGGCGGGCCCTGCGTCCCCCACAAAACCCAGAGCCTCTGGCCGAAGGCGGCGGGCCCTaGGTCCCCCACAAAACCCAG | + |
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Preference number: 4 (lower is better) Translates to: APRRRRALRPPQNPEPLAEGGGP*VPHKTQ Trigger: CTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTC...GGCCAGAGGCTCTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTCGTGGAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GAGCCTCTGGCCCGGGGCCCTCAGGCGGGAAGTAGGGCAAGAGAAACTGGGGCCCTCGCTGAGGCCCGGTaGGTACAGGGGCACCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EPLARGPQAGSRARETGALAEAR*VQGHPR Trigger: CCTGGGGTGCCCCTGTACCCACCGGGCCTCAGCGAG...GGCCCCAGTTTCTCTTGCCCTACTTCCCGCCTGAGGGCCCCGGGCCAGAGGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR GCA 90 bp | CAGCTCCACGAAGGCGGCGGGCCCTGCGTCCCCCACAAAACCCAGAGCCTCTGGTGCCCTGAGAGCAGCTaGTGCCTGAGGGGCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLHEGGGPCVPHKTQSLWCPESS*CLRGPA Trigger: GGCTGGGCCCCTCAGGCAGCAGCTGCTCTCAGGGCA...CCAGAGGCTCTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTCGTGGAGCTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GCTCCACGAAGGCGGCGGGCCCTGCGTCCCCCACAAAACCCAGAGCCTCTGGCCCCGTCTTGGGGGCCTTaGCCTTGCCTGCTCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: APRRRRALRPPQNPEPLAPSWGP*PCLLPA Trigger: TGCTGGGAGCAGGCAAGGCCAAGGCCCCCAAGACGG...GGCCAGAGGCTCTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTCGTGGAGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GAGCCTCTGGCCCGGGGCCCTCAGGCGGGAAGTAGGGCAAGAGAAACTGGGGCCGGCCTGCCGGCTGCCTaGCCTTCCTTCCCGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPLARGPQAGSRARETGAGLPAA*PSFPAF Trigger: GAAAGCCGGGAAGGAAGGCCAGGCAGCCGGCAGGCC...GGCCCCAGTTTCTCTTGCCCTACTTCCCGCCTGAGGGCCCCGGGCCAGAGGCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GAGCCTCTGGCCCGGGGCCCTCAGGCGGGAAGTAGGGCAAGAGAAACTGGGGCCGAGGCTCGGCACAGGTaGGAGCAGGCTGGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EPLARGPQAGSRARETGAEARHR*EQAGCP Trigger: TGGGCAACCAGCCTGCTCCCACCTGTGCCGAGCCTC...GGCCCCAGTTTCTCTTGCCCTACTTCCCGCCTGAGGGCCCCGGGCCAGAGGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GCTCCACGAAGGCGGCGGGCCCTGCGTCCCCCACAAAACCCAGAGCCTCTGGCCGAGGCCGGTACCTGCTaGTGGGGCTGGAAACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: APRRRRALRPPQNPEPLAEAGTC*WGWKHL Trigger: GAGGTGTTTCCAGCCCCACCAGCAGGTACCGGCCTC...GGCCAGAGGCTCTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTCGTGGAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GCAGCTCCACGAAGGCGGCGGGCCCTGCGTCCCCCACAAAACCCAGAGCCTCTGGGCCCAGCCCAAGCCTaGGGGCCTGTTTGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AAPRRRRALRPPQNPEPLGPAQA*GPVWEM Trigger: CATCTCCCAAACAGGCCCCCAGGCTTGGGCTGGGCC...CAGAGGCTCTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTCGTGGAGCTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | AGGCTCCCACTTAGGGACGGGGCAGGGGCAAGATGGGCCTGCACACTCAAACCCCAGGAGGTAGCTGCCTaGGGCGGAGGGGACCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RLPLRDGAGARWACTLKPQEVAA*GGGDPR Trigger: GCGGGGGTCCCCTCCGCCCCAGGCAGCTACCTCCTG...GGGTTTGAGTGTGCAGGCCCATCTTGCCCCTGCCCCGTCCCTAAGTGGGAGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GAAGAAGCACCCGCATGGGGCCATCTGGAAACCTGTGGGCGGCAGGCGGGTGCCAAAACCCAGAGCCTCTaGCCCGGGGCCCTCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EEAPAWGHLETCGRQAGAKTQSL*PGALRR Trigger: CCGCCTGAGGGCCCCGGGCCAGAGGCTCTGGGTTTT...GGCACCCGCCTGCCGCCCACAGGTTTCCAGATGGCCCCATGCGGGTGCTTCTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GCTCCACGAAGGCGGCGGGCCCTGCGTCCCCCACAAAACCCAGAGCCTCTGGCCAAGCTCTGGCCGTCTTaGGGGCCTTGGCCTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: APRRRRALRPPQNPEPLAKLWPS*GPWPCL Trigger: CAGGCAAGGCCAAGGCCCCCAAGACGGCCAGAGCTT...GGCCAGAGGCTCTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTCGTGGAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR TCA 90 bp | CTCCTTGACCTCGGCCACCTTGAGCTCGCTGAGGCCCGGTGGGTACAGGGGCACTGCCCTGCAGCTCCTTaGCGGGGAAGGCCAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLDLGHLELAEARWVQGHCPAAP*RGRPGV Trigger: AACCCCTGGCCTTCCCCGTCAAGGAGCTGCAGGGCA...GTGCCCCTGTACCCACCGGGCCTCAGCGAGCTCAAGGTGGCCGAGGTCAAGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR GCA 90 bp | GCTCCACGAAGGCGGCGGGCCCTGCGTCCCCCACAAAACCCAGAGCCTCTGGCCGGGGCAAGATGGGCCTaGACACTCAAACCCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: APRRRRALRPPQNPEPLAGARWA*TLKPTP Trigger: GGGAGTGGGTTTGAGTGTGCAGGCCCATCTTGCCCC...GGCCAGAGGCTCTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTCGTGGAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR GCA 90 bp | GCTCAGAGGCGCCTGGCAGGCAGTCGAAGAGCTTCATGGCGTCCTCCAGCAGAACCCGGGTGGGGCGGCTaGTCCTCGTCGAGCGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQRRLAGSRRASWRPPAEPGWGG*SSSSAL Trigger: CAAGGCGCTCGACGAGGAGCAGCCGCCCCACCCGGG...TTCTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR TCA 90 bp | CCAGCTTATACAGGGCTGACTGGCCCAGGTCGGGGGTGGTCCACTCGATCCGATGGCAGGCGGGTGCCCTaGGAGCAGCTGCTGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PAYTGLTGPGRGWSTRSDGRRVP*EQLLPE Trigger: CTCAGGCAGCAGCTGCTCTCAGGGCACCCGCCTGCC...ATCGGATCGAGTGGACCACCCCCGACCTGGGCCAGTCAGCCCTGTATAAGCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR GCA 90 bp | CTCCTTGACCTCGGCCACCTTGAGCTCGCTGAGGCCCGGTGGGTACAGGGGCACACCCTCTCCAGCAGGTaGTCCCACCCACCCGATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLDLGHLELAEARWVQGHTLSSR*SHPPDR Trigger: ACGATCGGGTGGGTGGGAGCACCTGCTGGAGAGGGT...GTGCCCCTGTACCCACCGGGCCTCAGCGAGCTCAAGGTGGCCGAGGTCAAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR GCA 90 bp | GCAGCTCCACGAAGGCGGCGGGCCCTGCGTCCCCCACAAAACCCAGAGCCTCTGGGGCAGTGTGGGCTCTaGAGGCAGCGTGATGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AAPRRRRALRPPQNPEPLGQCGL*RQRDEY Trigger: GTACTCATCACGCTGCCTGCAGAGCCCACACTGCCC...CAGAGGCTCTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTCGTGGAGCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GAAGAAGCACCCGCATGGGGCCATCTGGAAACCTGTGGGCGGCAGGCGGGTGCCGGCCCAGGTCGGGGGTaGTCCACTCGATCCGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: EEAPAWGHLETCGRQAGAGPGRG*STRSDR Trigger: TCTATCGGATCGAGTGGACCACCCCCGACCTGGGCC...GGCACCCGCCTGCCGCCCACAGGTTTCCAGATGGCCCCATGCGGGTGCTTCTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GCAGCTCCACGAAGGCGGCGGGCCCTGCGTCCCCCACAAAACCCAGAGCCTCTGTTATACAGGGCTGACTaGCCCAGGTCGGGGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AAPRRRRALRPPQNPEPLLYRAD*PRSGVV Trigger: GACCACCCCCGACCTGGGCCAGTCAGCCCTGTATAA...CAGAGGCTCTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTCGTGGAGCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR GCA 90 bp | CCAGCTTATACAGGGCTGACTGGCCCAGGTCGGGGGTGGTCCACTCGATCCGATCGGGCCCCACTGCCCTaGAGCTCCTTGACGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PAYTGLTGPGRGWSTRSDRAPLP*SSLTGK Trigger: CTTCCCCGTCAAGGAGCTGCAGGGCAGTGGGGCCCG...ATCGGATCGAGTGGACCACCCCCGACCTGGGCCAGTCAGCCCTGTATAAGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | CGAGGCCTTTCTCTTGCCAGACAGAATGGGGGCCGGGGTGTTGGTGGCAGGGGGACAAAGGTGCCCAGGTaGGTAGGGCCCTTAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGLSLARQNGGRGVGGRGTKVPR*VGPLGG Trigger: CCCGCCTAAGGGCCCTACCCACCTGGGCACCTTTGT...CCCCCTGCCACCAACACCCCGGCCCCCATTCTGTCTGGCAAGAGAAAGGCCTCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | CAGGGCCCCCTCCTTGACCTCGGCCACCTTGAGCTCGCTGAGGCCCGGTGGGTACTTTGGGGCCCTGGCTaGGTGATGGATGACACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGPLLDLGHLELAEARWVLWGPG*VMDDTE Trigger: CTCTGTGTCATCCATCACCCAGCCAGGGCCCCAAAG...TACCCACCGGGCCTCAGCGAGCTCAAGGTGGCCGAGGTCAAGGAGGGGGCCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | ATGCCTTCAGGCTCCCACTTAGGGACGGGGCAGGGGCAAGATGGGCCTGCACACCCGCATGGGGCCATCTaGAAACCTGTGGGCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MPSGSHLGTGQGQDGPAHPHGAI*KPVGGR Trigger: CCTGCCGCCCACAGGTTTCCAGATGGCCCCATGCGG...GTGTGCAGGCCCATCTTGCCCCTGCCCCGTCCCTAAGTGGGAGCCTGAAGGCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR GCA 90 bp | GCTCAGAGGCGCCTGGCAGGCAGTCGAAGAGCTTCATGGCGTCCTCCAGCAGAAGGGGAGGCCGGTACCTaGTGGTGGGGCTGGAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: AQRRLAGSRRASWRPPAEGEAGT*WWGWKH Trigger: GTGTTTCCAGCCCCACCAGCAGGTACCGGCCTCCCC...TTCTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | CTCCTTGACCTCGGCCACCTTGAGCTCGCTGAGGCCCGGTGGGTACAGGGGCACGGTTCAAGGAGCCTGTaGACAAAGGTGCCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLDLGHLELAEARWVQGHGSRSL*TKVPRW Trigger: CCACCTGGGCACCTTTGTCCACAGGCTCCTTGAACC...GTGCCCCTGTACCCACCGGGCCTCAGCGAGCTCAAGGTGGCCGAGGTCAAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GAAGAAGCACCCGCATGGGGCCATCTGGAAACCTGTGGGCGGCAGGCGGGTGCCGCCGGTACCTGCTGGTaGGGCTGGAAACACCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EEAPAWGHLETCGRQAGAAGTCW*GWKHLF Trigger: AAAGAGGTGTTTCCAGCCCCACCAGCAGGTACCGGC...GGCACCCGCCTGCCGCCCACAGGTTTCCAGATGGCCCCATGCGGGTGCTTCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GTCGGGGGTGGTCCACTCGATCCGATAGATGCGGGGGTCGAAGAAGCACCCGCAGGGGCAGGGGCAAGATaGGCCTGCACACTCAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: VGGGPLDPIDAGVEEAPAGAGAR*ACTLKP Trigger: GGGTTTGAGTGTGCAGGCCCATCTTGCCCCTGCCCC...TGCGGGTGCTTCTTCGACCCCCGCATCTATCGGATCGAGTGGACCACCCCCGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR CAA 72 bp | CCCGGCTTTCCCTTCTTGGCCGTCGAGGCCTTTCTCTaGCCAGACAGAATGGGGGCCGGGGTGTTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGFPFLAVEAFL*PDRMGAGVLVA Trigger: TGCCACCAACACCCCGGCCCCCATTCTGTCTGGCAAGAGAAAGGCCTCGACGGCCAAGAAGGGAAAGCCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR TCA 90 bp | CCAGCTTATACAGGGCTGACTGGCCCAGGTCGGGGGTGGTCCACTCGATCCGATCAGCTTATACAGGGCTaGCTGGCCCAGGTCGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PAYTGLTGPGRGWSTRSDQLIQG*LAQVGG Trigger: ACCCCCGACCTGGGCCAGTCAGCCCTGTATAAGCTG...ATCGGATCGAGTGGACCACCCCCGACCTGGGCCAGTCAGCCCTGTATAAGCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR GCA 90 bp | GTTGGACACGGTGTCCAGGATCTCAGGCACGCTGTAGTCAAAGGACAGCAGCTCGCTCCAGGAGGTAGCTaGCTGGGGCGGAGGGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: VGHGVQDLRHAVVKGQQLAPGGS*LGRRGP Trigger: GGGTCCCCTCCGCCCCAGGCAGCTACCTCCTGGAGC...GAGCTGCTGTCCTTTGACTACAGCGTGCCTGAGATCCTGGACACCGTGTCCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | CGAGGCCTTTCTCTTGCCAGACAGAATGGGGGCCGGGGTGTTGGTGGCAGGGGGGCCTGGGGGCCTGTTTaGGAGATGCCACAAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLSLARQNGGRGVGGRGAWGPV*EMPQEP Trigger: AGGTTCTTGTGGCATCTCCCAAACAGGCCCCCAGGC...CCCCCTGCCACCAACACCCCGGCCCCCATTCTGTCTGGCAAGAGAAAGGCCTCG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR TCA 90 bp | TATACAGGGCTGACTGGCCCAGGTCGGGGGTGGTCCACTCGATCCGATAGATGCTCTGGGGGACCTGTGTaGAGCATGGGGAGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YTGLTGPGRGWSTRSDRCSGGPV*SMGSRG Trigger: GCCTCTGCTCCCCATGCTTCACACAGGTCCCCCAGA...GCATCTATCGGATCGAGTGGACCACCCCCGACCTGGGCCAGTCAGCCCTGTATA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR GCA 90 bp | CGAGGCCTTTCTCTTGCCAGACAGAATGGGGGCCGGGGTGTTGGTGGCAGGGGGGGACGACATAGATATTaGTTTGGGGCCCTGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGLSLARQNGGRGVGGRGGRHRY*FGALAG Trigger: CCCAGCCAGGGCCCCAAAGCAATATCTATGTCGTCC...CCCCCTGCCACCAACACCCCGGCCCCCATTCTGTCTGGCAAGAGAAAGGCCTCG 62% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GGGCGGCTGCTCCTCGTCGAGCGCCTTGAAGTTGAAGAAGTAGTCAACGTTGGAGGGCCCTTAGGCGGGTaGGCCCCTGAACCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRLLLVERLEVEEVVNVGGPLGG*APEPSP Trigger: TGGAGAGGGTTCAGGGGCCCACCCGCCTAAGGGCCC...TCCAACGTTGACTACTTCTTCAACTTCAAGGCGCTCGACGAGGAGCAGCCGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | CCCGGCTTTCCCTTCTTGGCCGTCGAGGCCTTTCTCTTGCCAGACAGAATGGGGGCAGTGCCAAAGCTCTaGCCGTCTTGGGGGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGFPFLAVEAFLLPDRMGAVPKL*PSWGPW Trigger: CCAAGGCCCCCAAGACGGCCAGAGCTTTGGCACTGC...CCCCATTCTGTCTGGCAAGAGAAAGGCCTCGACGGCCAAGAAGGGAAAGCCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| 3UTR CAA 72 bp | GCCGGCTGCCTGGCCTTCCTTCCCGGCTTTCCCTTCTaGGCCGTCGAGGCCTTTCTCTTGCCAGACAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: AGCLAFLPGFPF*AVEAFLLPDRM Trigger: CATTCTGTCTGGCAAGAGAAAGGCCTCGACGGCCAAGAAGGGAAAGCCGGGAAGGAAGGCCAGGCAGCCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR TCA 90 bp | GTCGGGGGTGGTCCACTCGATCCGATAGATGCGGGGGTCGAAGAAGCACCCGCATCTGGGTCTGGGGGATaGTACAGGTTCAAGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGGGPLDPIDAGVEEAPASGSGG*YRFKEP Trigger: AGGCTCCTTGAACCTGTATCATCCCCCAGACCCAGA...TGCGGGTGCTTCTTCGACCCCCGCATCTATCGGATCGAGTGGACCACCCCCGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GGGCGGCTGCTCCTCGTCGAGCGCCTTGAAGTTGAAGAAGTAGTCAACGTTGGACAGGTGGGAGCAGGCTaGTTGCCCAGCACCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRLLLVERLEVEEVVNVGQVGAG*LPSTSA Trigger: GGCTGAGGTGCTGGGCAACCAGCCTGCTCCCACCTG...TCCAACGTTGACTACTTCTTCAACTTCAAGGCGCTCGACGAGGAGCAGCCGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | AGGCTCAGAGGCGCCTGGCAGGCAGTCGAAGAGCTTCATGGCGTCCTCCAGCAGTCTTTGGGGCTCATCTaGGGGACCTGTGTGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLRGAWQAVEELHGVLQQSLGLI*GTCVKH Trigger: ATGCTTCACACAGGTCCCCCAGATGAGCCCCAAAGA...CTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GATGACACAGAGCTTGTCTTTGGGGCTCATCTGGGGGACCTGTGTGAAGCATGGCCATCTGGAAACCTGTaGGCGGCAGGCGGGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DDTELVFGAHLGDLCEAWPSGNL*AAGGCP Trigger: AGGGCACCCGCCTGCCGCCCACAGGTTTCCAGATGG...CCATGCTTCACACAGGTCCCCCAGATGAGCCCCAAAGACAAGCTCTGTGTCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GGTGTCCAGGATCTCAGGCACGCTGTAGTCAAAGGACAGCAGCTCCTCGGGCAGCCGGCTTTCCCTTCTTaGCCGTCGAGGCCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVQDLRHAVVKGQQLLGQPAFPS*PSRPFS Trigger: AGAGAAAGGCCTCGACGGCCAAGAAGGGAAAGCCGG...CTGCCCGAGGAGCTGCTGTCCTTTGACTACAGCGTGCCTGAGATCCTGGACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | TATACAGGGCTGACTGGCCCAGGTCGGGGGTGGTCCACTCGATCCGATAGATGCACCTGCTGGTGGGGCTaGAAACACCTCTTTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTGLTGPGRGWSTRSDRCTCWWG*KHLFLW Trigger: CCAGAGAAAGAGGTGTTTCCAGCCCCACCAGCAGGT...GCATCTATCGGATCGAGTGGACCACCCCCGACCTGGGCCAGTCAGCCCTGTATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | CCCGGCTTTCCCTTCTTGGCCGTCGAGGCCTTTCTCTTGCCAGACAGAATGGGGCACAGAGCTTGTCTTTaGGGCTCATCTGGGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: PGFPFLAVEAFLLPDRMGHRACL*GSSGGP Trigger: AGGTCCCCCAGATGAGCCCCAAAGACAAGCTCTGTG...CCCCATTCTGTCTGGCAAGAGAAAGGCCTCGACGGCCAAGAAGGGAAAGCCGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GGTGTCCAGGATCTCAGGCACGCTGTAGTCAAAGGACAGCAGCTCCTCGGGCAGGAAGAAGCACCCGCATaGGGCCATCTGGAAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVQDLRHAVVKGQQLLGQEEAPA*GHLETC Trigger: ACAGGTTTCCAGATGGCCCCATGCGGGTGCTTCTTC...CTGCCCGAGGAGCTGCTGTCCTTTGACTACAGCGTGCCTGAGATCCTGGACACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GCTCAGAGGCGCCTGGCAGGCAGTCGAAGAGCTTCATGGCGTCCTCCAGCAGAAAGTCGAAGAGCTTCATaGCGTCCTCCAGCAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: AQRRLAGSRRASWRPPAESRRAS*RPPAEP Trigger: AGGTTCTGCTGGAGGACGCCATGAAGCTCTTCGACT...TTCTGCTGGAGGACGCCATGAAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
||
| CDS-3UTR GCA 90 bp | TATACAGGGCTGACTGGCCCAGGTCGGGGGTGGTCCACTCGATCCGATAGATGCAACCTTGTCAGGCAGTaGCAAAGCTCTGGCCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YTGLTGPGRGWSTRSDRCNLVRQ*QSSGRL Trigger: AAGACGGCCAGAGCTTTGGCACTGCCTGACAAGGTT...GCATCTATCGGATCGAGTGGACCACCCCCGACCTGGGCCAGTCAGCCCTGTATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGACACGGTGTCCAGGATCTCAGGCACGCTGTAGTCAAAGGACAGCAGCTCTCGAGGCCTTTCTCTTaGCAGACAGAATGGGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VGHGVQDLRHAVVKGQQLSRPFS*QTEWGP Trigger: CGGCCCCCATTCTGTCTGGCAAGAGAAAGGCCTCGA...GAGCTGCTGTCCTTTGACTACAGCGTGCCTGAGATCCTGGACACCGTGTCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTCAGGCTCCCACTTAGGGACGGGGCAGGGGCAAGATGGGCCTGCACACCTCTTTCTCTGGGTCTaGGGGATGATACAGGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MPSGSHLGTGQGQDGPAHLFLWV*GMIQVQ Trigger: TTGAACCTGTATCATCCCCCAGACCCAGAGAAAGAG...GTGTGCAGGCCCATCTTGCCCCTGCCCCGTCCCTAAGTGGGAGCCTGAAGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GATGACACAGAGCTTGTCTTTGGGGCTCATCTGGGGGACCTGTGTGAAGCATGGAGGCTCAGAGGCGCCTaGCAGGCAGTCGAAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: DDTELVFGAHLGDLCEAWRLRGA*QAVEEL Trigger: AAGCTCTTCGACTGCCTGCCAGGCGCCTCTGAGCCT...CCATGCTTCACACAGGTCCCCCAGATGAGCCCCAAAGACAAGCTCTGTGTCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR TCA 90 bp | GGGCGGCTGCTCCTCGTCGAGCGCCTTGAAGTTGAAGAAGTAGTCAACGTTGGATGGCTGGGTGATGGATaGCACAGAGCTTGTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GRLLLVERLEVEEVVNVGWLGDG*HRACLW Trigger: CCAAAGACAAGCTCTGTGTCATCCATCACCCAGCCA...TCCAACGTTGACTACTTCTTCAACTTCAAGGCGCTCGACGAGGAGCAGCCGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | CCCGGCTTTCCCTTCTTGGCCGTCGAGGCCTTTCTCTTGCCAGACAGAATGGGGAGAAGTAGTCAACGTTaGACACGGTGTCCAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: PGFPFLAVEAFLLPDRMGRSSQR*TRCPGS Trigger: AGATCCTGGACACCGTGTCCAACGTTGACTACTTCT...CCCCATTCTGTCTGGCAAGAGAAAGGCCTCGACGGCCAAGAAGGGAAAGCCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CCA 90 bp | GTTGGACACGGTGTCCAGGATCTCAGGCACGCTGTAGTCAAAGGACAGCAGCTCAAACACCTCTTTCTCTaGGTCTGGGGGATGATACAG | + |
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Preference number: 4 (lower is better) Translates to: VGHGVQDLRHAVVKGQQLKHLFL*VWGMIQ Trigger: CTGTATCATCCCCCAGACCCAGAGAAAGAGGTGTTT...GAGCTGCTGTCCTTTGACTACAGCGTGCCTGAGATCCTGGACACCGTGTCCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CAA 90 bp | CAGCTCCACGAAGGCGGCGGGCCCTGCGTCCCCCACAAAACCCAGAGCCTCTGGCTGCCCTGCAGCTCCTaGACGGGGAAGGCCAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: QLHEGGGPCVPHKTQSLWLPCSS*TGKARG Trigger: ACCCCTGGCCTTCCCCGTCAAGGAGCTGCAGGGCAG...CCAGAGGCTCTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTCGTGGAGCTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS TCA 90 bp | GACAAAGGTGCCCAGGTGGGTAGGGCCCTTAGGCGGGTGGGCCCCTaGACCCTCTCCAGCAGGTGCTCCCACCCACCCGATCGTACCCAT | + |
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Preference number: 5 (lower is better) Translates to: DKGAQVGRALRRVGP*TLSSRCSHPPDRTH Trigger: ATGGGTACGATCGGGTGGGTGGGAGCACCTGCTGGAGAGGGTTCAGGGGCCCACCCGCCTAAGGGCCCTACCCACCTGGGCACCTTTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CAA 90 bp | CAGCTCCACGAAGGCGGCGGGCCCTGCGTCCCCCACAAAACCCAGAGCCTCTGGACACAGAGCTTGTCTTaGGGGCTCATCTGGGGGACC | + |
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Preference number: 5 (lower is better) Translates to: QLHEGGGPCVPHKTQSLWTQSLS*GLIWGT Trigger: GGTCCCCCAGATGAGCCCCAAAGACAAGCTCTGTGT...CCAGAGGCTCTGGGTTTTGTGGGGGACGCAGGGCCCGCCGCCTTCGTGGAGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CAA 90 bp | AAGGACAGCAGCTCCTCGGGCAGGCACAGCGAGCGGATGTCATCGGCTGAGTTCAGCAGGGCCCCCTCCTaGACCTCGGCCACCTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: KDSSSSGRHSERMSSAEFSRAPS*TSATLS Trigger: GCTCAAGGTGGCCGAGGTCAAGGAGGGGGCCCTGCT...GAACTCAGCCGATGACATCCGCTCGCTGTGCCTGCCCGAGGAGCTGCTGTCCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS CCA 90 bp | GGCCATGCCTTCAGGCTCCCACTTAGGGACGGGGCAGGGGCAAGATaGGCCTGCACACTCAAACCCACTCCCAGCCTCGTCAAGGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: GHAFRLPLRDGAGAR*ACTLKPTPSLVKGS Trigger: TGAGCCCTTGACGAGGCTGGGAGTGGGTTTGAGTGTGCAGGCCCATCTTGCCCCTGCCCCGTCCCTAAGTGGGAGCCTGAAGGCATGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CAA 90 bp | GTCGGGGGTGGTCCACTCGATCCGATAGATGCGGGGGTCGAAGAAGCACCCGCACCCGGCTTTCCCTTCTaGGCCGTCGAGGCCTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VGGGPLDPIDAGVEEAPAPGFPF*AVEAFL Trigger: GAGAAAGGCCTCGACGGCCAAGAAGGGAAAGCCGGG...TGCGGGTGCTTCTTCGACCCCCGCATCTATCGGATCGAGTGGACCACCCCCGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS CCA 90 bp | GGGGATGATACAGGTTCAAGGAGCCTGTGGACAAAGGTGCCCAGGTaGGTAGGGCCCTTAGGCGGGTGGGCCCCTGAACCCTCTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GDDTGSRSLWTKVPR*VGPLGGWAPEPSPA Trigger: TGCTGGAGAGGGTTCAGGGGCCCACCCGCCTAAGGGCCCTACCCACCTGGGCACCTTTGTCCACAGGCTCCTTGAACCTGTATCATCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS CCA 90 bp | CCTCTTTCTCTGGGTCTGGGGGATGATACAGGTTCAAGGAGCCTGTaGACAAAGGTGCCCAGGTGGGTAGGGCCCTTAGGCGGGTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: PLSLGLGDDTGSRSL*TKVPRWVGPLGGWA Trigger: GGCCCACCCGCCTAAGGGCCCTACCCACCTGGGCACCTTTGTCCACAGGCTCCTTGAACCTGTATCATCCCCCAGACCCAGAGAAAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CAA 90 bp | GGTGTCCAGGATCTCAGGCACGCTGTAGTCAAAGGACAGCAGCTCCTCGGGCAGAAAGCTCTGGCCGTCTaGGGGGCCTTGGCCTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: GVQDLRHAVVKGQQLLGQKALAV*GALALP Trigger: AGGCAAGGCCAAGGCCCCCAAGACGGCCAGAGCTTT...CTGCCCGAGGAGCTGCTGTCCTTTGACTACAGCGTGCCTGAGATCCTGGACACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CAA 90 bp | CGAGGCCTTTCTCTTGCCAGACAGAATGGGGGCCGGGGTGTTGGTGGCAGGGGGTGGATGACACAGAGCTaGTCTTTGGGGCTCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: RGLSLARQNGGRGVGGRGWMTQS*SLGLIW Trigger: CCAGATGAGCCCCAAAGACAAGCTCTGTGTCATCCA...CCCCCTGCCACCAACACCCCGGCCCCCATTCTGTCTGGCAAGAGAAAGGCCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CAA 90 bp | GTTGGACACGGTGTCCAGGATCTCAGGCACGCTGTAGTCAAAGGACAGCAGCTCTTGACCTCGGCCACCTaGAGCTCGCTGAGGCCCGGT | + |
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Preference number: 5 (lower is better) Translates to: VGHGVQDLRHAVVKGQQLLTSAT*SSLRPG Trigger: ACCGGGCCTCAGCGAGCTCAAGGTGGCCGAGGTCAA...GAGCTGCTGTCCTTTGACTACAGCGTGCCTGAGATCCTGGACACCGTGTCCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS TCA 90 bp | CCTGCTGGTGGGGCTGGAAACACCTCTTTCTCTGGGTCTGGGGGATaGTACAGGTTCAAGGAGCCTGTGGACAAAGGTGCCCAGGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: PAGGAGNTSFSGSGG*YRFKEPVDKGAQVG Trigger: ACCCACCTGGGCACCTTTGTCCACAGGCTCCTTGAACCTGTATCATCCCCCAGACCCAGAGAAAGAGGTGTTTCCAGCCCCACCAGCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS CCA 90 bp | GCCGGTACCTGCTGGTGGGGCTGGAAACACCTCTTTCTCTGGGTCTaGGGGATGATACAGGTTCAAGGAGCCTGTGGACAAAGGTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: AGTCWWGWKHLFLWV*GMIQVQGACGQRCP Trigger: TGGGCACCTTTGTCCACAGGCTCCTTGAACCTGTATCATCCCCCAGACCCAGAGAAAGAGGTGTTTCCAGCCCCACCAGCAGGTACCGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS CCA 90 bp | CTGGAAACCTGCTGGTGGGGCTGGAAACACCTCTTTCTCTGGGTCTaGGGGATGATACAGGTTCAAGGAGCCCATAGCGGGAGGAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: LETCWWGWKHLFLWV*GMIQVQGAHSGRRL Trigger: GAGCCTCCTCCCGCTATGGGCTCCTTGAACCTGTATCATCCCCCAGACCCAGAGAAAGAGGTGTTTCCAGCCCCACCAGCAGGTTTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419421.3 |
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| CDS CCA 90 bp | GGCCATCTGGAAACCTGCTGGTGGGGCTGGAAACACCTCTTTCTCTaGGTCTGGGGGATGATACAGGTTCAAGGAGCCCATAGCGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: GHLETCWWGWKHLFL*VWGMIQVQGAHSGR Trigger: CCTCCCGCTATGGGCTCCTTGAACCTGTATCATCCCCCAGACCCAGAGAAAGAGGTGTTTCCAGCCCCACCAGCAGGTTTCCAGATGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419421.3 |
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| CDS-3UTR CAA 90 bp | GATGACACAGAGCTTGTCTTTGGGGCTCATCTGGGGGACCTGTGTGAAGCATGGAGCCTGGGGGCCTGTTaGGGAGATGCCACAAGAACC | + |
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Preference number: 5 (lower is better) Translates to: DDTELVFGAHLGDLCEAWSLGAC*GDATRT Trigger: GGTTCTTGTGGCATCTCCCAAACAGGCCCCCAGGCT...CCATGCTTCACACAGGTCCCCCAGATGAGCCCCAAAGACAAGCTCTGTGTCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CAA 90 bp | GTTGGACACGGTGTCCAGGATCTCAGGCACGCTGTAGTCAAAGGACAGCAGCTCTCCTCCAGCAGAACCTaGTCAGGCAGTGCCAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: VGHGVQDLRHAVVKGQQLSSSRT*SGSAKA Trigger: AGCTTTGGCACTGCCTGACAAGGTTCTGCTGGAGGA...GAGCTGCTGTCCTTTGACTACAGCGTGCCTGAGATCCTGGACACCGTGTCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS-3UTR CAA 90 bp | GTTGGACACGGTGTCCAGGATCTCAGGCACGCTGTAGTCAAAGGACAGCAGCTCGACATAGATATTGCTTaGGGGCCCTGGCTGGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: VGHGVQDLRHAVVKGQQLDIDIA*GPWLGD Trigger: ATCACCCAGCCAGGGCCCCAAAGCAATATCTATGTC...GAGCTGCTGTCCTTTGACTACAGCGTGCCTGAGATCCTGGACACCGTGTCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS TCA 72 bp | GCCCAGGTGGGTAGGGCCCTTAGGCGGGTGGGCCCCTaGACCCTCTCCAGCAGGTGCTCCCACCCACCCGAT | + |
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Preference number: 6 (lower is better) Translates to: AQVGRALRRVGP*TLSSRCSHPPD Trigger: ATCGGGTGGGTGGGAGCACCTGCTGGAGAGGGTTCAGGGGCCCACCCGCCTAAGGGCCCTACCCACCTGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS GCA 72 bp | CTCCCACTTAGGGACGGGGCAGGGGCAAGATGGGCCTaGACACTCAAACCCACTCCCAGCCTCGTCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LPLRDGAGARWA*TLKPTPSLVKG Trigger: GCCCTTGACGAGGCTGGGAGTGGGTTTGAGTGTGCAGGCCCATCTTGCCCCTGCCCCGTCCCTAAGTGGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS CCA 72 bp | ACAGGTTCAAGGAGCCTGTGGACAAAGGTGCCCAGGTaGGTAGGGCCCTTAGGCGGGTGGGCCCCTGAACCC | + |
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Preference number: 6 (lower is better) Translates to: TGSRSLWTKVPR*VGPLGGWAPEP Trigger: GGGTTCAGGGGCCCACCCGCCTAAGGGCCCTACCCACCTGGGCACCTTTGTCCACAGGCTCCTTGAACCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS CCA 72 bp | AGCCTCGTCAAGGGCTCAGGGGAGGCCGGTACCTGCTaGTGGGGCTGGAAACACCTCTTTCTCTGGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLVKGSGEAGTC*WGWKHLFLWVW Trigger: CCAGACCCAGAGAAAGAGGTGTTTCCAGCCCCACCAGCAGGTACCGGCCTCCCCTGAGCCCTTGACGAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS CCA 72 bp | TTCAGGCTCCCACTTAGGGACGGGGCAGGGGCAAGATaGGCCTGCACACTCAAACCCACTCCCAGCCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: FRLPLRDGAGAR*ACTLKPTPSLV Trigger: GACGAGGCTGGGAGTGGGTTTGAGTGTGCAGGCCCATCTTGCCCCTGCCCCGTCCCTAAGTGGGAGCCTGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS CCA 72 bp | CTGGGTCTGGGGGATGATACAGGTTCAAGGAGCCTGTaGACAAAGGTGCCCAGGTGGGTAGGGCCCTTAGGC | + |
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Preference number: 6 (lower is better) Translates to: LGLGDDTGSRSL*TKVPRWVGPLG Trigger: GCCTAAGGGCCCTACCCACCTGGGCACCTTTGTCCACAGGCTCCTTGAACCTGTATCATCCCCCAGACCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS CCA 72 bp | GATCCGATAGATGCGGGGGTCGAAGAAGCACCCGCATaGGGCCATCTGGAAACCTGCTGGTGGGGCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: DPIDAGVEEAPA*GHLETCWWGWK Trigger: TTTCCAGCCCCACCAGCAGGTTTCCAGATGGCCCCATGCGGGTGCTTCTTCGACCCCCGCATCTATCGGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419421.3 |
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| CDS CCA 72 bp | TGCTGGTGGGGCTGGAAACACCTCTTTCTCTGGGTCTaGGGGATGATACAGGTTCAAGGAGCCCATAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: CWWGWKHLFLWV*GMIQVQGAHSG Trigger: CCCGCTATGGGCTCCTTGAACCTGTATCATCCCCCAGACCCAGAGAAAGAGGTGTTTCCAGCCCCACCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419421.3 |
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| CDS CCA 72 bp | GGTACCTGCTGGTGGGGCTGGAAACACCTCTTTCTCTaGGTCTGGGGGATGATACAGGTTCAAGGAGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: GTCWWGWKHLFL*VWGMIQVQGAC Trigger: ACAGGCTCCTTGAACCTGTATCATCCCCCAGACCCAGAGAAAGAGGTGTTTCCAGCCCCACCAGCAGGTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS CCA 72 bp | TGCTGGTGGGGCTGGAAACACCTCTTTCTCTGGGTCTaGGGGATGATACAGGTTCAAGGAGCCTGTGGACAA | + |
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Preference number: 6 (lower is better) Translates to: CWWGWKHLFLWV*GMIQVQGACGQ Trigger: TTGTCCACAGGCTCCTTGAACCTGTATCATCCCCCAGACCCAGAGAAAGAGGTGTTTCCAGCCCCACCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390672.2 |
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| CDS CCA 72 bp | GAAACCTGCTGGTGGGGCTGGAAACACCTCTTTCTCTaGGTCTGGGGGATGATACAGGTTCAAGGAGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: ETCWWGWKHLFL*VWGMIQVQGAH Trigger: ATGGGCTCCTTGAACCTGTATCATCCCCCAGACCCAGAGAAAGAGGTGTTTCCAGCCCCACCAGCAGGTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000419421.3 |
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