Pregenerated sensors for PRR20G (Homo sapiens)
Ensembl gene IDs: ENSG00000239620Ensembl transcript IDs: ENST00000465482.3
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAGAAGCCCAGCCCCACTaGCGCGGCCTCGACCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGEAQPH*RGLDLP Trigger: GGGCAGGTCGAGGCCGCGGCAGTGGGGCTGGGCTTC...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAAGCCCCACCTCAGGCTaGGCTGCATGGGGGCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGSPTSG*AAWGPG Trigger: CCCCGGCCCCCATGCAGCCCAGCCTGAGGTGGGGCT...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR GCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGACACCTCAGGCTGGGCTaGATGGGGGCCGGGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGHLRLG*MGAGAF Trigger: GAAGGCCCCGGCCCCCATGCAGCCCAGCCTGAGGTG...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR TCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAGCAGGAGGTGGCTCCTaGAGCCCCACCTCAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGAGGGS*SPTSGW Trigger: CCAGCCTGAGGTGGGGCTTCAGGAGCCACCTCCTGC...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGATGGCTGTGCGCGAGCTaGGGGCTCCCGTCTCATGGG | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGWLCAS*GLPSHG Trigger: CCCATGAGACGGGAGCCCCCAGCTCGCGCACAGCCA...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR GCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAGGGGCCAACATGGTCTaGCTGGCCACAGCCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGGANMV*LATATG Trigger: GCCTGTGGCTGTGGCCAGGCAGACCATGTTGGCCCC...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR GCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAGACGTCGCCCTCAAATaGGCCCCCTACCAGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGDVALK*APYQAG Trigger: ACCTGCCTGGTAGGGGGCGCATTTGAGGGCGACGTC...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAAGGCTGGGGTCTGCCTaGCTTCCAGTTGCCCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGRLGSA*LPVAPG Trigger: ACCAGGGGCAACTGGAAGCCAGGCAGACCCCAGCCT...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAGAGAGGGGGCCAACATaGTCTGCCTGGCCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGERGPT*SAWPQP Trigger: TGGCTGTGGCCAGGCAGACCATGTTGGCCCCCTCTC...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAACGGGATCACGGCTATaGCTCCGACGTCGCCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGTGSRL*LRRRPQ Trigger: TTGAGGGCGACGTCGGAGCCATAGCCGTGATCCCGT...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR GCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAGATGGACTAGGTACATaGCTGGCCCCACTCTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGDGLGT*LAPLSR Trigger: GCGAGAGAGTGGGGCCAGGCATGTACCTAGTCCATC...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR GCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAGGGCCGGGGCCTTCCTaGACAATTCCAGGCATAAGA | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGGPGPS*TIPGIR Trigger: TCTTATGCCTGGAATTGTGCAGGAAGGCCCCGGCCC...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAGTGGGCAGGGAACACTaGGACACTCTGCACGATGGT | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGVGREH*DTLHDG Trigger: ACCATCGTGCAGAGTGTCCCAGTGTTCCCTGCCCAC...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAAGTAAGGGCTCTGACTaGGATGGGCAGGGAGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGSKGSD*DGQGGV Trigger: CACTCCTCCCTGCCCATCCCAGTCAGAGCCCTTACT...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR TCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAGATGCACAAAGTAGATaGGCCACCCGGAGGCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGDAQSR*ATRRPE Trigger: TTCAGGCCTCCGGGTGGCTCATCTACTTTGTGCATC...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAGTGGGTTTTGCCGGTTaGACTGGGTCTACAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGVGFAG*TGSTGS Trigger: AGACCCTGTAGACCCAGTCCAACCGGCAAAACCCAC...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGACTACTGTCAGGATCCTaGGAGGAGGACTTGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGLLSGS*EEDLEA Trigger: AGCCTCCAAGTCCTCCTCCCAGGATCCTGACAGTAG...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGATTTTGCCGGTTGGACTaGGTCTACAGGGTCTTCACG | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGFCRLD*VYRVFT Trigger: CGTGAAGACCCTGTAGACCCAGTCCAACCGGCAAAA...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAAGTAAAAGAGAAGGCTaGGGTCTGCCTGGCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGSKREG*GLPGFQ Trigger: CTGGAAGCCAGGCAGACCCCAGCCTTCTCTTTTACT...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR TCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAGGACTTGGAGGCTCATaGCAACACAAAGTAAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGGLGGS*QHKVRA Trigger: AGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGTCC...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR GCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAATAAGCAGTGGGTTTTaGCGGTTGGACTGGGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGISSGF*RLDWVY Trigger: GTAGACCCAGTCCAACCGGCAAAACCCACTGCTTAT...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGACCATGGTCATTCAGATaGACTAGGTACATGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGPWSFR*TRYMPG Trigger: GCCAGGCATGTACCTAGTCCATCTGAATGACCATGG...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR GCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAAACACTGGGACACTCTaGACGATGGTGCTATTAGAG | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGNTGTL*TMVLLE Trigger: CTCTAATAGCACCATCGTGCAGAGTGTCCCAGTGTT...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAGTTTCACATAAGCAGTaGGTTTTGCCGGTTGGACTG | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGVSHKQ*VLPVGL Trigger: CAGTCCAACCGGCAAAACCCACTGCTTATGTGAAAC...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR GCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGATCCAGGCATAAGAGCTaGTTCAGTAAAAGAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGSRHKS*FSKREG Trigger: GCCTTCTCTTTTACTGAAGCAGCTCTTATGCCTGGA...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR GCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAGTGCTATTAGAGGTCTaGACGATGCACAAAGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGVLLEV*TMHKVD Trigger: ATCTACTTTGTGCATCGTGCAGACCTCTAATAGCAC...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR TCA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGATATTTGAATAAGCATTaGGGAACTCCATGCATGTGT | + |
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Preference number: 4 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGYLNKH*GTPCMC Trigger: ACACATGCATGGAGTTCCTCAATGCTTATTCAAATA...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS GCA 90 bp | GCAGGGAACACTGGGACACTCTGCACGATGGTGCTATTAGAGGTCTaGACGATGCACAAAGTAGATGAGCCACCCGGAGGCCTGAAACTG | + |
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Preference number: 5 (lower is better) Translates to: AGNTGTLCTMVLLEV*TMHKVDEPPGGLKL Trigger: CAGTTTCAGGCCTCCGGGTGGCTCATCTACTTTGTGCATCGTGCAGACCTCTAATAGCACCATCGTGCAGAGTGTCCCAGTGTTCCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CAA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGACACCTGAAGCTTGATTaGGGGCCAGGAAGCGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGHLKLD*GPGSEV Trigger: GACCTCGCTTCCTGGCCCCAAATCAAGCTTCAGGTG...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CAA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGAAGTGGGTTTTGCCGGTaGGACTGGGTCTACAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGSGFCR*DWVYRV Trigger: GACCCTGTAGACCCAGTCCAACCGGCAAAACCCACT...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS-3UTR CAA 90 bp | ACTTGGAGGCTCATGACAACACAAAGTAAGGGCTCTGACTGGGATGGGCAGGGACATAAGCAGTGGGTTTaGCCGGTTGGACTGGGTCTA | + |
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Preference number: 5 (lower is better) Translates to: TWRLMTTQSKGSDWDGQGHKQWV*PVGLGL Trigger: TAGACCCAGTCCAACCGGCAAAACCCACTGCTTATG...TCCCTGCCCATCCCAGTCAGAGCCCTTACTTTGTGTTGTCATGAGCCTCCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS GCA 72 bp | CGGGATCACGGCTATGGCTCCGACGTCGCCCTCAAATaGGCCCCCTACCAGGCAGGTAGGAGGGAGCACCCA | + |
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Preference number: 6 (lower is better) Translates to: RDHGYGSDVALK*APYQAGRREHP Trigger: TGGGTGCTCCCTCCTACCTGCCTGGTAGGGGGCGCATTTGAGGGCGACGTCGGAGCCATAGCCGTGATCCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS CAA 90 bp | GGGCTCCCGTCTCATGGGTTTCACATAAGCAGTGGGTTTTGCCGGTaGGACTGGGTCTACAGGGTCTTCACGGTCCACACCAGAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GLPSHGFHISSGFCR*DWVYRVFTVHTRAA Trigger: GGCTGCTCTGGTGTGGACCGTGAAGACCCTGTAGACCCAGTCCAACCGGCAAAACCCACTGCTTATGTGAAACCCATGAGACGGGAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS CCA 72 bp | CTGGGGGCTCCCGTCTCATGGGTTTCACATAAGCAGTaGGTTTTGCCGGTTGGACTGGGTCTACAGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LGAPVSWVSHKQ*VLPVGLGLQGL Trigger: AAGACCCTGTAGACCCAGTCCAACCGGCAAAACCCACTGCTTATGTGAAACCCATGAGACGGGAGCCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS CCA 72 bp | TCCAGGCATAAGAGCTGCTTCAGTAAAAGAGAAGGCTaGGGTCTGCCTGGCTTCCAGTTGCCCCTGGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: SRHKSCFSKREG*GLPGFQLPLVA Trigger: GGCTACCAGGGGCAACTGGAAGCCAGGCAGACCCCAGCCTTCTCTTTTACTGAAGCAGCTCTTATGCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS GCA 72 bp | CTCCCGTCTCATGGGTTTCACATAAGCAGTGGGTTTTaGCGGTTGGACTGGGTCTACAGGGTCTTCACGGTC | + |
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Preference number: 6 (lower is better) Translates to: LPSHGFHISSGF*RLDWVYRVFTV Trigger: GACCGTGAAGACCCTGTAGACCCAGTCCAACCGGCAAAACCCACTGCTTATGTGAAACCCATGAGACGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS GCA 72 bp | ACTGGGACACTCTGCACGATGGTGCTATTAGAGGTCTaGACGATGCACAAAGTAGATGAGCCACCCGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: TGTLCTMVLLEV*TMHKVDEPPGG Trigger: GCCTCCGGGTGGCTCATCTACTTTGTGCATCGTGCAGACCTCTAATAGCACCATCGTGCAGAGTGTCCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS CCA 72 bp | GGGTTTCACATAAGCAGTGGGTTTTGCCGGTTGGACTaGGTCTACAGGGTCTTCACGGTCCACACCAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: GFHISSGFCRLD*VYRVFTVHTRA Trigger: TGCTCTGGTGTGGACCGTGAAGACCCTGTAGACCCAGTCCAACCGGCAAAACCCACTGCTTATGTGAAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS CAA 72 bp | GCTCCCGTCTCATGGGTTTCACATAAGCAGTGGGTTTaGCCGGTTGGACTGGGTCTACAGGGTCTTCACGGT | + |
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Preference number: 6 (lower is better) Translates to: APVSWVSHKQWV*PVGLGLQGLHG Trigger: ACCGTGAAGACCCTGTAGACCCAGTCCAACCGGCAAAACCCACTGCTTATGTGAAACCCATGAGACGGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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| CDS CAA 72 bp | TCTCATGGGTTTCACATAAGCAGTGGGTTTTGCCGGTaGGACTGGGTCTACAGGGTCTTCACGGTCCACACC | + |
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Preference number: 6 (lower is better) Translates to: SHGFHISSGFCR*DWVYRVFTVHT Trigger: GGTGTGGACCGTGAAGACCCTGTAGACCCAGTCCAACCGGCAAAACCCACTGCTTATGTGAAACCCATGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465482.3 |
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