RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRR19 (Homo sapiens)

Ensembl gene IDs: ENSG00000188368

Ensembl transcript IDs: ENST00000341747.8, ENST00000499536.2, ENST00000595750.2, ENST00000598490.1

Found 293 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GGTGGAAAAGACCAGGCTTCCGGACTGCTCTGGGCTACTACCCAGGAGAGGCTGAGGGCATGGGGAAGGTaGACTCCTTTGTCCCTTGTT +
Preference number: 2 (lower is better)
Translates to: GGKDQASGLLWATTQERLRAWGR*TPLSLV
Trigger: AACAAGGGACAAAGGAGTTCACCTTCCCCATGCCCT...CAGCCTCTCCTGGGTAGTAGCCCAGAGCAGTCCGGAAGCCTGGTCTTTTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598490.1
3UTR-3UTR CCA 90 bp GTGAGGGAAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGACTCCCCCTGTTTGCCTCTCCTGCTCTaGGACTTGATCAGGGCTATT +
Preference number: 2 (lower is better)
Translates to: VRESMVARDLLAVPDSPCLPLLL*DLIRAI
Trigger: AATAGCCCTGATCAAGTCCCAGAGCAGGAGAGGCAA...ACAGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTTCCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598490.1
3UTR-3UTR CCA 90 bp CTCAGCCTCTCCTCAGTACAGTCTCATGGGTGGAAAAGACCAGGCTTCCGGACTCAAGTCAAACGCTGTTaGGGGACCCCAGGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: LSLSSVQSHGWKRPGFRTQVKRC*GTPGCS
Trigger: GGAACAGCCTGGGGTCCCCCAACAGCGTTTGACTTG...AGTCCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAGGAGAGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598490.1
3UTR-3UTR TCA 90 bp CCCCAGGCTGTTCCAGATGGCGAAGACAGTGAGGGAAAGTATGGTGGCCAGGGATCCTGCTCTGGGACTTaGTCAGGGCTATTAATCCAG +
Preference number: 2 (lower is better)
Translates to: PQAVPDGEDSEGKYGGQGSCSGT*SGLLIQ
Trigger: CTGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGA...TCCCTGGCCACCATACTTTCCCTCACTGTCTTCGCCATCTGGAACAGCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
3UTR CCA 72 bp CCTAGCCTCAGCCTCTCCTCAGTACAGTCTCATGGGTaGAAAAGACCAGGCTTCCGGACTGCTCTGGGCTAC +
Preference number: 3 (lower is better)
Translates to: PSLSLSSVQSHG*KRPGFRTALGY
Trigger: GTAGCCCAGAGCAGTCCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAGGAGAGGCTGAGGCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
3UTR-3UTR CAA 90 bp CCTCTCCTCAGTACAGTCTCATGGGTGGAAAAGACCAGGCTTCCGGACTGCTCTGAACTCCTTTGTCCCTaGTTGCTTCCTTTGCCTCTC +
Preference number: 3 (lower is better)
Translates to: PLLSTVSWVEKTRLPDCSELLCP*LLPLPL
Trigger: GAGAGGCAAAGGAAGCAACAAGGGACAAAGGAGTTC...AGAGCAGTCCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAGGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
3UTR-3UTR CAA 90 bp GGGGACCCCAGGCTGTTCCAGATGGCGAAGACAGTGAGGGAAAGTATGGTGGCCATGAAAAGTACTTTATaGAGGTCACTGGGAGTACAA +
Preference number: 3 (lower is better)
Translates to: GDPRLFQMAKTVRESMVAMKSTL*RSLGVQ
Trigger: TTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT...GGCCACCATACTTTCCCTCACTGTCTTCGCCATCTGGAACAGCCTGGGGTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR TCA 90 bp GTGAGGGAAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGACTCCCCCTGTGCCGGCCCTGGGTTATaGCCACGAGCTTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VRESMVARDLLAVPDSPCAGPGL*PRAWRQ
Trigger: CTGCCTCCAAGCTCGTGGTCATAACCCAGGGCCGGC...ACAGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTTCCCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR GCA 90 bp GGTGGAAAAGACCAGGCTTCCGGACTGCTCTGGGCTACTACCCAGGAGAGGCTGTTGAAGAGACCCCGGTaGTCCCGGCTCAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GGKDQASGLLWATTQERLLKRPR*SRLSRP
Trigger: GGGCCGGCTGAGCCGGGAGCACCGGGGTCTCTTCAA...CAGCCTCTCCTGGGTAGTAGCCCAGAGCAGTCCGGAAGCCTGGTCTTTTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp AAAGACCAGGCTTCCGGACTGCTCTGGGCTACTACCCAGGAGAGGCTGGGCAGTTTCCTGGGCCCTGCCTaGGCTTGGGGAGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: KDQASGLLWATTQERLGSFLGPA*AWGGLG
Trigger: GCCAAGCCCTCCCCAAGCCCAGGCAGGGCCCAGGAA...ACTGCCCAGCCTCTCCTGGGTAGTAGCCCAGAGCAGTCCGGAAGCCTGGTCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR TCA 90 bp GTGAGGGAAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGACTCCCCCTGTGCTGCGGCGCCAAGATaGGTGGAGAGGAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: VRESMVARDLLAVPDSPCAAAPR*VERRTQ
Trigger: CTGGGTTCTCCTCTCCACTCATCTTGGCGCCGCAGC...ACAGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTTCCCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR GCA 90 bp AAAGACCAGGCTTCCGGACTGCTCTGGGCTACTACCCAGGAGAGGCTGGGCAGTCTGACACTGCAGCTCTaGCAGCAGCTGCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: KDQASGLLWATTQERLGSLTLQL*QQLPHA
Trigger: GGCGTGGGGCAGCTGCTGGCAGAGCTGCAGTGTCAG...ACTGCCCAGCCTCTCCTGGGTAGTAGCCCAGAGCAGTCCGGAAGCCTGGTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp AAAGACCAGGCTTCCGGACTGCTCTGGGCTACTACCCAGGAGAGGCTGGGCAGTGCCACAGGAGGATCGTaGTGGGCTAATGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: KDQASGLLWATTQERLGSATGGS*WANGRR
Trigger: CCGCCGGCCATTAGCCCACCACGATCCTCCTGTGGC...ACTGCCCAGCCTCTCCTGGGTAGTAGCCCAGAGCAGTCCGGAAGCCTGGTCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp AAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGACTCCCCCTGTGCGCAGTTTTGTCCCTGGACCGTaGGGCTGGTTCCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KVWWPGTSWRCQTPPVRSFVPGP*GWFLGP
Trigger: AGGGCCCAGGAACCAGCCCCACGGTCCAGGGACAAA...ACTGCGCACAGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp AAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGACTCCCCCTGTGCGCAGTCACGCCAGACAACTCTaGGGAACTGGGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KVWWPGTSWRCQTPPVRSHARQL*GTGWAW
Trigger: CCAGGCCCACCCAGTTCCCCAGAGTTGTCTGGCGTG...ACTGCGCACAGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp AAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGACTCCCCCTGTGCGCAGTGCGCAGTGGGCATGCTaGAGGTGTAGGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: KVWWPGTSWRCQTPPVRSAQWAC*RCRAWG
Trigger: TCCCCATGCCCTACACCTCCAGCATGCCCACTGCGC...ACTGCGCACAGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp GTGAGGGAAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGACTCCCCCTGTCAGAGACCCCAGGCTTaGCCCCTGGCACAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: VRESMVARDLLAVPDSPCQRPQA*PLAQRK
Trigger: TTTCCTCTGTGCCAGGGGCCAAGCCTGGGGTCTCTG...ACAGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTTCCCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598490.1
3UTR CAA 72 bp AAGACAGTGAGGGAAAGTATGGTGGCCAGGGACCTCTaGGCGGTGCCAGACTCCCCCTGTGCGCAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: KTVRESMVARDL*AVPDSPCAQWA
Trigger: TGCCCACTGCGCACAGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTTCCCTCACTGTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGACAGTGAGGGAAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGACTCCACAGGAGGATCGTGGTaGGCTAATGGCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: KTVRESMVARDLLAVPDSTGGSW*ANGRRL
Trigger: CAGCCGCCGGCCATTAGCCCACCACGATCCTCCTGT...GGAGTCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTTCCCTCACTGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp GGCGAAGACAGTGAGGGAAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGACCGGGGGAAGGCCTGTaGCAAACTCAGCTGACACTG +
Preference number: 4 (lower is better)
Translates to: GEDSEGKYGGQGPLGGARPGEGL*QTQLTL
Trigger: CAGTGTCAGCTGAGTTTGCCACAGGCCTTCCCCCGG...TCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTTCCCTCACTGTCTTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTCCCAGGCTTGGCCCCTaGCAAGGGTGGCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASPRLGP*QGWLAA
Trigger: GGCTGCCAGCCACCCTTGCCAGGGGCCAAGCCTGGG...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
CDS-3UTR CCA 90 bp CTCAGCCTCTCCTCAGTACAGTCTCATGGGTGGAAAAGACCAGGCTTCCGGACTGGGCCGAGGAGGGGGTaGCGTGGCTACCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LSLSSVQSHGWKRPGFRTGPRRG*RGYQPD
Trigger: ATCTGGCTGGTAGCCACGCCACCCCCTCCTCGGCCC...AGTCCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAGGAGAGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR GCA 90 bp CCCCAGGCTGTTCCAGATGGCGAAGACAGTGAGGGAAAGTATGGTGGCCAGGGATGTGCGCAGTGGGCATaGTGGAGGTGTAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: PQAVPDGEDSEGKYGGQGCAQWA*WRCRAW
Trigger: CCATGCCCTACACCTCCAGCATGCCCACTGCGCACA...TCCCTGGCCACCATACTTTCCCTCACTGTCTTCGCCATCTGGAACAGCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp GGCGAAGACAGTGAGGGAAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGAGTGAGCGTTCCCACCTaGGATATTGAGGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GEDSEGKYGGQGPLGGARVSVPT*DIEESG
Trigger: CCCGGACTCCTCAATATCCCAGGTGGGAACGCTCAC...TCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTTCCCTCACTGTCTTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp GGGGACCCCAGGCTGTTCCAGATGGCGAAGACAGTGAGGGAAAGTATGGTGGCCCAGGTGGATCCCGAATaGCCACAGGAGGATCGTGGT +
Preference number: 4 (lower is better)
Translates to: GDPRLFQMAKTVRESMVAQVDPE*PQEDRG
Trigger: ACCACGATCCTCCTGTGGCCATTCGGGATCCACCTG...GGCCACCATACTTTCCCTCACTGTCTTCGCCATCTGGAACAGCCTGGGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp AAAGACCAGGCTTCCGGACTGCTCTGGGCTACTACCCAGGAGAGGCTGGGCAGTAGTAGGGACCACAGGTaGATCCCGAATGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: KDQASGLLWATTQERLGSSRDHR*IPNGHR
Trigger: CCTGTGGCCATTCGGGATCCACCTGTGGTCCCTACT...ACTGCCCAGCCTCTCCTGGGTAGTAGCCCAGAGCAGTCCGGAAGCCTGGTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp AAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGACTCCCCCTGTGCGCAGTGCACGATGGCATCCCTaGCATCCTGAATCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: KVWWPGTSWRCQTPPVRSARWHP*HPESGS
Trigger: GGAACCTGATTCAGGATGCCAGGGATGCCATCGTGC...ACTGCGCACAGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTCCTGGCAAGGGTGGCTaGCAGCCCCGAAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASPGKGG*QPRSTR
Trigger: CCTGGTGCTTCGGGGCTGCCAGCCACCCTTGCCAGG...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCCCCAGGCTTGGCCCCTaGCAAGGGTGGCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASAPRLGP*QGWLAA
Trigger: GGCTGCCAGCCACCCTTGCCAGGGGCCAAGCCTGGG...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
CDS-3UTR CCA 90 bp CCCCAGGCTGTTCCAGATGGCGAAGACAGTGAGGGAAAGTATGGTGGCCAGGGAGCTTCCGGACTGCTCTaGGCTACTACCCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PQAVPDGEDSEGKYGGQGASGLL*ATTQER
Trigger: CCTCTCCTGGGTAGTAGCCCAGAGCAGTCCGGAAGC...TCCCTGGCCACCATACTTTCCCTCACTGTCTTCGCCATCTGGAACAGCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp CATGCTGGAGGTGTAGGGCATGGGGAAGGTGAACTCCTTTGTCCCTTGTTGCTTGGAGGGACGCTCACCTaGCAAGGGTGGCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: HAGGVGHGEGELLCPLLLGGTLT*QGWLAA
Trigger: GGCTGCCAGCCACCCTTGCCAGGTGAGCGTCCCTCC...AAGCAACAAGGGACAAAGGAGTTCACCTTCCCCATGCCCTACACCTCCAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR TCA 90 bp GGCGAAGACAGTGAGGGAAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGAGGTTTCTCAGGCTGCTaGAAAGGCTGGGAGACTGGT +
Preference number: 4 (lower is better)
Translates to: GEDSEGKYGGQGPLGGARGFSGC*KGWETG
Trigger: ACCAGTCTCCCAGCCTTTTCAGCAGCCTGAGAAACC...TCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTTCCCTCACTGTCTTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR TCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTGCCGGCCCTGGGTTATaGCCACGAGCTTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASAGPGL*PRAWRQ
Trigger: CTGCCTCCAAGCTCGTGGTCATAACCCAGGGCCGGC...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp CCTCTCCTCAGTACAGTCTCATGGGTGGAAAAGACCAGGCTTCCGGACTGCTCTGCATCCCTGGCATCCTaGATCAGGTTCCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PLLSTVSWVEKTRLPDCSASLAS*IRFLRG
Trigger: CCCCCGGAGGAACCTGATTCAGGATGCCAGGGATGC...AGAGCAGTCCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR GCA 90 bp CCTCTCCTCAGTACAGTCTCATGGGTGGAAAAGACCAGGCTTCCGGACTGCTCTCTAATGGCCGGCGGCTaGCCACCAGGGCCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: PLLSTVSWVEKTRLPDCSLMAGG*PPGPCY
Trigger: GTAACAAGGCCCTGGTGGGCAGCCGCCGGCCATTAG...AGAGCAGTCCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR GCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTCTGACACTGCAGCTCTaGCAGCAGCTGCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASLTLQL*QQLPHA
Trigger: GGCGTGGGGCAGCTGCTGGCAGAGCTGCAGTGTCAG...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCGAAGGCTTCCGTCCCTaGAGAGGAGGCGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASAEGFRP*RGGGAL
Trigger: CAGGGCGCCGCCTCCTCTCCAGGGACGGAAGCCTTC...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR CCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTGCCACAGGAGGATCGTaGTGGGCTAATGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASATGGS*WANGRR
Trigger: CCGCCGGCCATTAGCCCACCACGATCCTCCTGTGGC...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp CCTCTCCTCAGTACAGTCTCATGGGTGGAAAAGACCAGGCTTCCGGACTGCTCTCGGCTCAGCCGGCCCTaGGTTATGACCACGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PLLSTVSWVEKTRLPDCSRLSRP*VMTTSL
Trigger: CAAGCTCGTGGTCATAACCCAGGGCCGGCTGAGCCG...AGAGCAGTCCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTGAGTGTGGGGCTGCCTaGCACCAGGGTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASECGAA*HQGPTA
Trigger: AGCAGTGGGACCCTGGTGCCAGGCAGCCCCACACTC...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTCAGAGACCCCAGGCTTaGCCCCTGGCAAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASQRPQA*PLARVA
Trigger: AGCCACCCTTGCCAGGGGCCAAGCCTGGGGTCTCTG...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
CDS-3UTR CCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCGGGCCGAGGAGGGGGTaGCGTGGCTACCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASAGPRRG*RGYQPD
Trigger: ATCTGGCTGGTAGCCACGCCACCCCCTCCTCGGCCC...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp AAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGACTCCCCCTGTGCGCAGTGTACAGTCTCATGGGTaGAAAAGACCAGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: KVWWPGTSWRCQTPPVRSVQSHG*KRPGFR
Trigger: CCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTAC...ACTGCGCACAGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTGCTCTCGAAGTCACCTaGCGCTGTTCCGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASALEVT*RCSGPR
Trigger: CCGAGGCCCGGAACAGCGCCAGGTGACTTCGAGAGC...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595750.2
CDS-3UTR CCA 90 bp CCCCAGGCTGTTCCAGATGGCGAAGACAGTGAGGGAAAGTATGGTGGCCAGGGACCCAGGCTTGGCCCCTaGCACAGAGGAAAGAAGCAT +
Preference number: 4 (lower is better)
Translates to: PQAVPDGEDSEGKYGGQGPRLGP*HRGKKH
Trigger: ATGCTTCTTTCCTCTGTGCCAGGGGCCAAGCCTGGG...TCCCTGGCCACCATACTTTCCCTCACTGTCTTCGCCATCTGGAACAGCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR TCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCGCCGGCCCTGGGTTATaGCCACGAGCTTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASAAGPGL*PRAWRQ
Trigger: CTGCCTCCAAGCTCGTGGTCATAACCCAGGGCCGGC...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTGCATCCCTGGCATCCTaGATCAGGTTCCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASASLAS*IRFLRG
Trigger: CCCCCGGAGGAACCTGATTCAGGATGCCAGGGATGC...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTCGGCTCAGCCGGCCCTaGGTTATGACCACGAGCTTG +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASRLSRP*VMTTSL
Trigger: CAAGCTCGTGGTCATAACCCAGGGCCGGCTGAGCCG...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGACAGTGAGGGAAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGACTCCAGGGATTTCACCTCGTaGTTGAAGAGACCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: KTVRESMVARDLLAVPDSRDFTS*LKRPRC
Trigger: GCACCGGGGTCTCTTCAACCACGAGGTGAAATCCCT...GGAGTCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTTCCCTCACTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCGAGTGTGGGGCTGCCTaGCACCAGGGTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASAECGAA*HQGPTA
Trigger: AGCAGTGGGACCCTGGTGCCAGGCAGCCCCACACTC...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp CTTCCTTTGCCTCTCCTGCTCTGGGACTTGATCAGGGCTATTAATCCAGAAGGGGAGTGTGGGGCTGCCTaGCACCAGGGTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LPLPLLLWDLIRAINPEGECGAA*HQGPTA
Trigger: AGCAGTGGGACCCTGGTGCCAGGCAGCCCCACACTC...CCCTTCTGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGAGAGGCAAAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCCGTGGGGCTGGTTCCTaGGCCCTGCCTGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALARGAGS*ALPGLG
Trigger: CCCAAGCCCAGGCAGGGCCCAGGAACCAGCCCCACG...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTGCGCAGTGGGCATGCTaGAGGTGTAGGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASAQWAC*RCRAWG
Trigger: TCCCCATGCCCTACACCTCCAGCATGCCCACTGCGC...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTGGCCAGGGACCTCTTaGCGGTGCCAGACTCCCCCT +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASAWPGTS*RCQTPP
Trigger: AGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCA...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCATCCCACCTGGGATATTaGGGAGTCCGGGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASSHLGY*GVRGRG
Trigger: CCCGCGCCCCCGGACTCCTCAATATCCCAGGTGGGA...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR TCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCGCTGCGGCGCCAAGATaGGTGGAGAGGAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASAAAAPR*VERRTQ
Trigger: CTGGGTTCTCCTCTCCACTCATCTTGGCGCCGCAGC...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR TCA 90 bp CTCAGCCTCTCCTCAGTACAGTCTCATGGGTGGAAAAGACCAGGCTTCCGGACTTCAGGCACACAACCATaGCAGGCCTGCAAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LSLSSVQSHGWKRPGFRTSGTQP*QACKVC
Trigger: GCACACCTTGCAGGCCTGTCATGGTTGTGTGCCTGA...AGTCCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAGGAGAGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR TCA 90 bp AAGACAGTGAGGGAAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGACTCCAGATGGCGAAGACAGTaGGGGAAAGTATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KTVRESMVARDLLAVPDSRWRRQ*GKVWWP
Trigger: TGGCCACCATACTTTCCCTCACTGTCTTCGCCATCT...GGAGTCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTTCCCTCACTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR GCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCGCAAGCCCACGCCGGTaGAGGACGTACAGGGCGACG +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAASPRR*RTYRAT
Trigger: CGTCGCCCTGTACGTCCTGCACCGGCGTGGGCTTGC...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR GCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCCTAATGGCCGGCGGCTaGCCACCAGGGCCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASALMAGG*PPGPCY
Trigger: GTAACAAGGCCCTGGTGGGCAGCCGCCGGCCATTAG...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCATTGAAGAGACCCCGGTaGTCCCGGCTCAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASLKRPR*SRLSRP
Trigger: GGGCCGGCTGAGCCGGGAGCACCGGGGTCTCTTCAA...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTCAGGCCTGCAAGGTGTaGACGATGGCATCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASQACKV*TMASLA
Trigger: TGCCAGGGATGCCATCGTGCACACCTTGCAGGCCTG...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTACCAGGCTTCCGGACTaGTCTGGGCTACTACCCAGG +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASTRLPD*SGLLPR
Trigger: CCTGGGTAGTAGCCCAGAGCAGTCCGGAAGCCTGGT...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp CCTCTCCTCAGTACAGTCTCATGGGTGGAAAAGACCAGGCTTCCGGACTGCTCTTGGGAGACTGGTCCCTaGGTATCCATGGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLLSTVSWVEKTRLPDCSWETGP*VSMVSS
Trigger: GGAGGACACCATGGATACCCAGGGACCAGTCTCCCA...AGAGCAGTCCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTTCCTGGGCCCTGCCTaGGCTTGGGGAGGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAFLGPA*AWGGLG
Trigger: GCCAAGCCCTCCCCAAGCCCAGGCAGGGCCCAGGAA...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCCTCTGGGGAACTGGGTaGGCCTGGGCCCGAACCTCC +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALALWGTG*AWARTS
Trigger: GGAGGTTCGGGCCCAGGCCCACCCAGTTCCCCAGAG...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCCACGCCAGACAACTCTaGGGAACTGGGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASAHARQL*GTGWAW
Trigger: CCAGGCCCACCCAGTTCCCCAGAGTTGTCTGGCGTG...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCACCTGGCAAGGGTGGCTaGCAGCCCCGAAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASPGKGG*QPRSTR
Trigger: CCTGGTGCTTCGGGGCTGCCAGCCACCCTTGCCAGG...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp CTCCTGCTCTGGGACTTGATCAGGGCTATTAATCCAGAAGGGTGTCATCTTTCTCCTGGCAAGGGTGGCTaGCAGCCCCGAAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LLLWDLIRAINPEGCHLSPGKGG*QPRSTR
Trigger: CCTGGTGCTTCGGGGCTGCCAGCCACCCTTGCCAGG...AGAAAGATGACACCCTTCTGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCGCGCAGTGGGCATGCTaGAGGTGTAGGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASAAQWAC*RCRAWG
Trigger: TCCCCATGCCCTACACCTCCAGCATGCCCACTGCGC...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTATTTCACCTCGTGGTTaGAGAGACCCCGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASISPRG*RDPGAP
Trigger: GGGAGCACCGGGGTCTCTTCAACCACGAGGTGAAAT...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp CTTCCTTTGCCTCTCCTGCTCTGGGACTTGATCAGGGCTATTAATCCAGAAGGGAGCTCTGCCAGCAGCTaGCCCACGCCAGACAACTCT +
Preference number: 4 (lower is better)
Translates to: LPLPLLLWDLIRAINPEGSSASS*PTPDNS
Trigger: AGAGTTGTCTGGCGTGGGGCAGCTGCTGGCAGAGCT...CCCTTCTGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGAGAGGCAAAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR GCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCACTGACACTGCAGCTCTaGCAGCAGCTGCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASLTLQL*QQLPHA
Trigger: GGCGTGGGGCAGCTGCTGGCAGAGCTGCAGTGTCAG...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCCTGACACTGCAGCTCTaGCAGCAGCTGCCCCACGCC +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALALTLQL*QQLPHA
Trigger: GGCGTGGGGCAGCTGCTGGCAGAGCTGCAGTGTCAG...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCCAGGGCGACGGGCGCTaGATGTCCCTGGTGAGCGTT +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAQGDGR*MSLVSV
Trigger: AACGCTCACCAGGGACATCCAGCGCCCGTCGCCCTG...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCGCCACAGGAGGATCGTaGTGGGCTAATGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAATGGS*WANGRR
Trigger: CCGCCGGCCATTAGCCCACCACGATCCTCCTGTGGC...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTCAGGTGGATCCCGAATaGCCACAGGAGGATCGTGGT +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASQVDPE*PQEDRG
Trigger: ACCACGATCCTCCTGTGGCCATTCGGGATCCACCTG...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTAGTAGGGACCACAGGTaGATCCCGAATGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASSRDHR*IPNGHR
Trigger: CCTGTGGCCATTCGGGATCCACCTGTGGTCCCTACT...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCCGTGGGGCTGGTTCCTaGGCCCTGCCTGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPRGAGS*ALPGLG
Trigger: CCCAAGCCCAGGCAGGGCCCAGGAACCAGCCCCACG...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp CCTCTCCTCAGTACAGTCTCATGGGTGGAAAAGACCAGGCTTCCGGACTGCTCTGCAAGGTGTGCACGATaGCATCCCTGGCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: PLLSTVSWVEKTRLPDCSARCAR*HPWHPE
Trigger: TTCAGGATGCCAGGGATGCCATCGTGCACACCTTGC...AGAGCAGTCCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTACCCAGGCTTGGCCCCTaGCAAGGGTGGCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALPRLGP*QGWLAA
Trigger: GGCTGCCAGCCACCCTTGCCAGGGGCCAAGCCTGGG...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCCAGAGACCCCAGGCTTaGCCCCTGGCAAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAQRPQA*PLARVA
Trigger: AGCCACCCTTGCCAGGGGCCAAGCCTGGGGTCTCTG...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
CDS-3UTR CCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCACAGAGACCCCAGGCTTaGCCCCTGGCAAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASQRPQA*PLARVA
Trigger: AGCCACCCTTGCCAGGGGCCAAGCCTGGGGTCTCTG...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
CDS-3UTR CCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTCAAGTCAAACGCTGTTaGGGGACCCCAGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASQVKRC*GTPGCS
Trigger: GGAACAGCCTGGGGTCCCCCAACAGCGTTTGACTTG...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCGAGGAGGGGGTGGCGTaGCTACCAGCCAGATGCTTT +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASAEEGVA*LPARCF
Trigger: AAAGCATCTGGCTGGTAGCCACGCCACCCCCTCCTC...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCGTGAATAGGGAGGGCTaGGCGCGGTGGCTTATGCCT +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASAVNREG*ARWLMP
Trigger: AGGCATAAGCCACCGCGCCCAGCCCTCCCTATTCAC...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR TCA 90 bp CTTCCTTTGCCTCTCCTGCTCTGGGACTTGATCAGGGCTATTAATCCAGAAGGGATTTCACCTCGTGGTTaGAGAGACCCCGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LPLPLLLWDLIRAINPEGISPRG*RDPGAP
Trigger: GGGAGCACCGGGGTCTCTTCAACCACGAGGTGAAAT...CCCTTCTGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGAGAGGCAAAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR TCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCGCATCCCTGGCATCCTaGATCAGGTTCCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAASLAS*IRFLRG
Trigger: CCCCCGGAGGAACCTGATTCAGGATGCCAGGGATGC...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCAAGCCCACGCCGGTaGAGGACGTACAGGGCGACG +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALASPRR*RTYRAT
Trigger: CGTCGCCCTGTACGTCCTGCACCGGCGTGGGCTTGC...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR GCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGGGACCTCTTGGCGGTaGCAGACTCCCCCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALGTSWR*QTPPVR
Trigger: GCGCACAGGGGGAGTCTGGCACCGCCAAGAGGTCCC...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCGGGACCTCTTGGCGGTaGCAGACTCCCCCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAGTSWR*QTPPVR
Trigger: GCGCACAGGGGGAGTCTGGCACCGCCAAGAGGTCCC...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCACAGGAGGATCGTGGTaGGCTAATGGCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALATGGSW*ANGRRL
Trigger: CAGCCGCCGGCCATTAGCCCACCACGATCCTCCTGT...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAACAGGAGGATCGTGGTaGGCTAATGGCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASTGGSW*ANGRRL
Trigger: CAGCCGCCGGCCATTAGCCCACCACGATCCTCCTGT...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTTTGTCCCTGGACCGTaGGGCTGGTTCCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAFVPGP*GWFLGP
Trigger: AGGGCCCAGGAACCAGCCCCACGGTCCAGGGACAAA...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCGGAACTGGGTGGGCCTaGGCCCGAACCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPGTGWA*ARTSRH
Trigger: GTGCCTGGAGGTTCGGGCCCAGGCCCACCCAGTTCC...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCGGAACTGGGTGGGCCTaGGCCCGAACCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAGTGWA*ARTSRH
Trigger: GTGCCTGGAGGTTCGGGCCCAGGCCCACCCAGTTCC...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCCTCTGGGGAACTGGGTaGGCCTGGGCCCGAACCTCC +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPLWGTG*AWARTS
Trigger: GGAGGTTCGGGCCCAGGCCCACCCAGTTCCCCAGAG...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTACTCTGGGGAACTGGGTaGGCCTGGGCCCGAACCTCC +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALLWGTG*AWARTS
Trigger: GGAGGTTCGGGCCCAGGCCCACCCAGTTCCCCAGAG...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCCACGCCAGACAACTCTaGGGAACTGGGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAHARQL*GTGWAW
Trigger: CCAGGCCCACCCAGTTCCCCAGAGTTGTCTGGCGTG...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCACACGCCAGACAACTCTaGGGAACTGGGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASHARQL*GTGWAW
Trigger: CCAGGCCCACCCAGTTCCCCAGAGTTGTCTGGCGTG...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCGGGCCGAGGAGGGGGTaGCGTGGCTACCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAGPRRG*RGYQPD
Trigger: ATCTGGCTGGTAGCCACGCCACCCCCTCCTCGGCCC...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp GACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCATCCCACCTGGGATATTaGGGAGTCCGGGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: DHEKYFIEVTGSTRYLSPSHLGY*GVRGRG
Trigger: CCCGCGCCCCCGGACTCCTCAATATCCCAGGTGGGA...TGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341747.8
CDS-3UTR TCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTTTTAGAATGACCAGATaGGGCCAGGCATGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASFRMTR*GQAWWL
Trigger: GAGCCACCATGCCTGGCCTCATCTGGTCATTCTAAA...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR TCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCAGGGGAGTAGCAAAGTaGATAGGGAGGGCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALARGVAK*IGRAGR
Trigger: GCGCCCAGCCCTCCCTATTCACTTTGCTACTCCCCT...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR GCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTACCGACTCGCTCATCCTaGAGGAGCTGCGGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALPTRSS*RSCGAK
Trigger: CTTGGCGCCGCAGCTCCTGCAGGATGAGCGAGTCGG...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR GCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCCGACTCGCTCATCCTaGAGGAGCTGCGGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAPTRSS*RSCGAK
Trigger: CTTGGCGCCGCAGCTCCTGCAGGATGAGCGAGTCGG...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR GCA 90 bp GACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCATTGAAGAGACCCCGGTaGTCCCGGCTCAGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: DHEKYFIEVTGSTRYLSPLKRPR*SRLSRP
Trigger: GGGCCGGCTGAGCCGGGAGCACCGGGGTCTCTTCAA...TGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000499536.2
CDS-3UTR GCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAAGCTCTGCCAGCAGCTaGCCCACGCCAGACAACTCT +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASSSASS*PTPDNS
Trigger: AGAGTTGTCTGGCGTGGGGCAGCTGCTGGCAGAGCT...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCACAGGCCTGCAAGGTGTaGACGATGGCATCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASQACKV*TMASLA
Trigger: TGCCAGGGATGCCATCGTGCACACCTTGCAGGCCTG...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp ACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGGGGACCTCTTGGCGGTaGCAGACTCCCCCTGTGCGC +
Preference number: 4 (lower is better)
Translates to: TMKSTLLRSLGVQDICPQGTSWR*QTPPVR
Trigger: GCGCACAGGGGGAGTCTGGCACCGCCAAGAGGTCCC...CTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGGAAGGCTTCCGTCCCTaGAGAGGAGGCGGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: TMKSTLLRSLGVQDICPQEGFRP*RGGGAL
Trigger: CAGGGCGCCGCCTCCTCTCCAGGGACGGAAGCCTTC...CTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCCCGGGGGAAGGCCTGTaGCAAACTCAGCTGACACTG +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAPGEGL*QTQLTL
Trigger: CAGTGTCAGCTGAGTTTGCCACAGGCCTTCCCCCGG...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCGCACGATGGCATCCCTaGCATCCTGAATCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASAARWHP*HPESGS
Trigger: GGAACCTGATTCAGGATGCCAGGGATGCCATCGTGC...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCGCAAGGTGTGCACGATaGCATCCCTGGCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASAARCAR*HPWHPE
Trigger: TTCAGGATGCCAGGGATGCCATCGTGCACACCTTGC...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCTGGCCAGGGACCTCTTaGCGGTGCCAGACTCCCCCT +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAWPGTS*RCQTPP
Trigger: AGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCA...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTGTACAGTCTCATGGGTaGAAAAGACCAGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASVQSHG*KRPGFR
Trigger: CCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTAC...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCATTTCACCTCGTGGTTaGAGAGACCCCGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAISPRG*RDPGAP
Trigger: GGGAGCACCGGGGTCTCTTCAACCACGAGGTGAAAT...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCAGATGGCGAAGACAGTaGGGGAAAGTATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASARWRRQ*GKVWWP
Trigger: TGGCCACCATACTTTCCCTCACTGTCTTCGCCATCT...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCTTCTTTTCCGCGGTaGCCCCAGCTCTCGAAGTCA +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASASFPR*PQLSKS
Trigger: TGACTTCGAGAGCTGGGGTCACCGCGGAAAAGAAGC...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000595750.2
CDS-3UTR GCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCCTAATGGCCGGCGGCTaGCCACCAGGGCCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPLMAGG*PPGPCY
Trigger: GTAACAAGGCCCTGGTGGGCAGCCGCCGGCCATTAG...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCAAAAGGCTGGGAGACTaGTCCCTGGGTATCCATGGT +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASAKRLGD*SLGIHG
Trigger: ACCATGGATACCCAGGGACCAGTCTCCCAGCCTTTT...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp CTTCCTTTGCCTCTCCTGCTCTGGGACTTGATCAGGGCTATTAATCCAGAAGGGAAAAGGCTGGGAGACTaGTCCCTGGGTATCCATGGT +
Preference number: 4 (lower is better)
Translates to: LPLPLLLWDLIRAINPEGKRLGD*SLGIHG
Trigger: ACCATGGATACCCAGGGACCAGTCTCCCAGCCTTTT...CCCTTCTGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGAGAGGCAAAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp GACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCACAGGAGGATCGTaGTGGGCTAATGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: DHEKYFIEVTGSTRYLSPATGGS*WANGRR
Trigger: CCGCCGGCCATTAGCCCACCACGATCCTCCTGTGGC...TGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000499536.2
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCCAGGTGGATCCCGAATaGCCACAGGAGGATCGTGGT +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAQVDPE*PQEDRG
Trigger: ACCACGATCCTCCTGTGGCCATTCGGGATCCACCTG...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCAGTAGGGACCACAGGTaGATCCCGAATGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALASRDHR*IPNGHR
Trigger: CCTGTGGCCATTCGGGATCCACCTGTGGTCCCTACT...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCCGGCTCAGCCGGCCCTaGGTTATGACCACGAGCTTG +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPRLSRP*VMTTSL
Trigger: CAAGCTCGTGGTCATAACCCAGGGCCGGCTGAGCCG...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGGAGTGTGGGGCTGCCTaGCACCAGGGTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: TMKSTLLRSLGVQDICPQECGAA*HQGPTA
Trigger: AGCAGTGGGACCCTGGTGCCAGGCAGCCCCACACTC...CTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTATTTGTCCCTGGACCGTaGGGCTGGTTCCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALFVPGP*GWFLGP
Trigger: AGGGCCCAGGAACCAGCCCCACGGTCCAGGGACAAA...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTTTGTCCCTGGACCGTaGGGCTGGTTCCTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPFVPGP*GWFLGP
Trigger: AGGGCCCAGGAACCAGCCCCACGGTCCAGGGACAAA...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp GACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCATGGCCAGGGACCTCTTaGCGGTGCCAGACTCCCCCT +
Preference number: 4 (lower is better)
Translates to: DHEKYFIEVTGSTRYLSPWPGTS*RCQTPP
Trigger: AGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCA...TGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000499536.2
CDS-3UTR CCA 90 bp ACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGTGGCCAGGGACCTCTTaGCGGTGCCAGACTCCCCCT +
Preference number: 4 (lower is better)
Translates to: TMKSTLLRSLGVQDICPQWPGTS*RCQTPP
Trigger: AGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCA...CTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCACAAGTCAAACGCTGTTaGGGGACCCCAGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASQVKRC*GTPGCS
Trigger: GGAACAGCCTGGGGTCCCCCAACAGCGTTTGACTTG...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCCAAGTCAAACGCTGTTaGGGGACCCCAGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAQVKRC*GTPGCS
Trigger: GGAACAGCCTGGGGTCCCCCAACAGCGTTTGACTTG...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTGGGAGACTGGTCCCTaGGTATCCATGGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAWETGP*VSMVSW
Trigger: CCAGGACACCATGGATACCCAGGGACCAGTCTCCCA...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCAGCTGTGGGGCGCAATaGCTTCTTTTCCGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALASCGAQ*LLFRGD
Trigger: GTCACCGCGGAAAAGAAGCCATTGCGCCCCACAGCT...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000595750.2
CDS-3UTR TCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGGTTTCTCAGGCTGCTaGAAAGGCTGGGAGACTGGT +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASGFSGC*KGWETG
Trigger: ACCAGTCTCCCAGCCTTTTCAGCAGCCTGAGAAACC...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCGGTTTCTCAGGCTGCTaGAAAGGCTGGGAGACTGGT +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAGFSGC*KGWETG
Trigger: ACCAGTCTCCCAGCCTTTTCAGCAGCCTGAGAAACC...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCAGAACGGCTGGTTCGTaGCACTCTCACTACCTGATT +
Preference number: 4 (lower is better)
Translates to: FIEVTGSTRYLSPALASARTAGS*HSHYLI
Trigger: AATCAGGTAGTGAGAGTGGCACGAACCAGCCGTTCT...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR GCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCAGGCCTGCAAGGTGTaGACGATGGCATCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAQACKV*TMASLA
Trigger: TGCCAGGGATGCCATCGTGCACACCTTGCAGGCCTG...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTGTGCGCAGTGGGCATaGTGGAGGTGTAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPCAQWA*WRCRAW
Trigger: CCATGCCCTACACCTCCAGCATGCCCACTGCGCACA...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTATGTGCGCAGTGGGCATaGTGGAGGTGTAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALCAQWA*WRCRAW
Trigger: CCATGCCCTACACCTCCAGCATGCCCACTGCGCACA...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCACCAGGCTTCCGGACTaGTCTGGGCTACTACCCAGG +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPTRLPD*SGLLPR
Trigger: CCTGGGTAGTAGCCCAGAGCAGTCCGGAAGCCTGGT...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCGCTCAGGAGAACGGCTaGTTCGTGCCACTCTCACTA +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAAQENG*FVPLSL
Trigger: TAGTGAGAGTGGCACGAACCAGCCGTTCTCCTGAGC...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR CCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCTCAGGAGAACGGCTaGTTCGTGCCACTCTCACTA +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASAQENG*FVPLSL
Trigger: TAGTGAGAGTGGCACGAACCAGCCGTTCTCCTGAGC...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR CCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCCGGCGCCAAGATGAGTaGAGAGGAGAACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPRRQDE*RGEPSQ
Trigger: CTGGCTGGGTTCTCCTCTCCACTCATCTTGGCGCCG...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR CCA 90 bp ACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCGGCTCAGCCGGCCCTaGGTTATGACCACGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TMKSTLLRSLGVQDICPQRLSRP*VMTTSL
Trigger: CAAGCTCGTGGTCATAACCCAGGGCCGGCTGAGCCG...CTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAAGGGATTTCACCTCGTaGTTGAAGAGACCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASRDFTS*LKRPRC
Trigger: GCACCGGGGTCTCTTCAACCACGAGGTGAAATCCCT...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTACCGGGGGAAGGCCTGTaGCAAACTCAGCTGACACTG +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALPGEGL*QTQLTL
Trigger: CAGTGTCAGCTGAGTTTGCCACAGGCCTTCCCCCGG...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCCCGGGGGAAGGCCTGTaGCAAACTCAGCTGACACTG +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPPGEGL*QTQLTL
Trigger: CAGTGTCAGCTGAGTTTGCCACAGGCCTTCCCCCGG...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCGAGGAGGGGGTGGCGTaGCTACCAGCCAGATGCTTT +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAEEGVA*LPARCF
Trigger: AAAGCATCTGGCTGGTAGCCACGCCACCCCCTCCTC...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCGAGGAGGGGGTGGCGTaGCTACCAGCCAGATGCTTT +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPEEGVA*LPARCF
Trigger: AAAGCATCTGGCTGGTAGCCACGCCACCCCCTCCTC...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCTTCCGGACTGCTCTaGGCTACTACCCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALASGLL*ATTQER
Trigger: CCTCTCCTGGGTAGTAGCCCAGAGCAGTCCGGAAGC...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCTGGTGTCCTCCTAAGTaGAGGCTTCCGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAWCPPK*RLPSLE
Trigger: CTCCAGGGACGGAAGCCTTCACTTAGGAGGACACCA...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR TCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCATTTCACCTCGTGGTTaGAGAGACCCCGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAISPRG*RDPGAP
Trigger: GGGAGCACCGGGGTCTCTTCAACCACGAGGTGAAAT...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCTCAGGCACACAACCATaGCAGGCCTGCAAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPASGTQP*QACKVC
Trigger: GCACACCTTGCAGGCCTGTCATGGTTGTGTGCCTGA...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTCAGGCACACAACCATaGCAGGCCTGCAAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPSGTQP*QACKVC
Trigger: GCACACCTTGCAGGCCTGTCATGGTTGTGTGCCTGA...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAAGGGCATGGGGAAGGTaGACTCCTTTGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASRAWGR*TPLSLV
Trigger: AACAAGGGACAAAGGAGTTCACCTTCCCCATGCCCT...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCGGCAGGCAGATTACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAGRQIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTAATCTGCCTGCC...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR GCA 90 bp ACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGAGCTCTGCCAGCAGCTaGCCCACGCCAGACAACTCT +
Preference number: 4 (lower is better)
Translates to: TMKSTLLRSLGVQDICPQSSASS*PTPDNS
Trigger: AGAGTTGTCTGGCGTGGGGCAGCTGCTGGCAGAGCT...CTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp GACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAACCAGGCTTCCGGACTaGTCTGGGCTACTACCCAGG +
Preference number: 4 (lower is better)
Translates to: DHEKYFIEVTGSTRYLSPTRLPD*SGLLPR
Trigger: CCTGGGTAGTAGCCCAGAGCAGTCCGGAAGCCTGGT...TGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000499536.2
CDS-3UTR CCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCGTGAGCGTTCCCACCTaGGATATTGAGGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPVSVPT*DIEESG
Trigger: CCCGGACTCCTCAATATCCCAGGTGGGAACGCTCAC...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR CCA 90 bp ACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCGGCGCCAAGATGAGTaGAGAGGAGAACCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TMKSTLLRSLGVQDICPQRRQDE*RGEPSQ
Trigger: CTGGCTGGGTTCTCCTCTCCACTCATCTTGGCGCCG...CTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR CCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCTGGGAGACTGGTCCCTaGGTATCCATGGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAWETGP*VSMVSS
Trigger: GGAGGACACCATGGATACCCAGGGACCAGTCTCCCA...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR CCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCAGGTGGATCCCGAATaGCCACAGGAGGATCGTGGT +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAQVDPE*PQEDRG
Trigger: ACCACGATCCTCCTGTGGCCATTCGGGATCCACCTG...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAAGTAGGGACCACAGGTaGATCCCGAATGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALSRDHR*IPNGHR
Trigger: CCTGTGGCCATTCGGGATCCACCTGTGGTCCCTACT...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGGAGGAGGGGGTGGCGTaGCTACCAGCCAGATGCTTT +
Preference number: 4 (lower is better)
Translates to: TMKSTLLRSLGVQDICPQEEGVA*LPARCF
Trigger: AAAGCATCTGGCTGGTAGCCACGCCACCCCCTCCTC...CTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp CTTCCTTTGCCTCTCCTGCTCTGGGACTTGATCAGGGCTATTAATCCAGAAGGGCTCAGTACAGTCTCATaGGTGGAAAAGACCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LPLPLLLWDLIRAINPEGLSTVS*VEKTRL
Trigger: AAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAG...CCCTTCTGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGAGAGGCAAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGTCCCTGGGTATCCATaGTGTCCTCTCTCGCCCCAA +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALVPGYP*CPLSPQ
Trigger: TTGGGGCGAGAGAGGACACCATGGATACCCAGGGAC...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000595750.2
CDS-3UTR TCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGGTTTCTCAGGCTGCTaGAAAGGCTGGGAGACTGGT +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALGFSGC*KGWETG
Trigger: ACCAGTCTCCCAGCCTTTTCAGCAGCCTGAGAAACC...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCCTGCTCTGGGACTTaGTCAGGGCTATTAATCCAG +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALASCSGT*SGLLIQ
Trigger: CTGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGA...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTGAATACTATTTAGAATaGCCAGATGAGGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: IEVTGSTRYLSPALASASEYYLE*PDEARH
Trigger: ATGCCTGGCCTCATCTGGTCATTCTAAATAGTATTC...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR GCA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAAGAACGGCTGGTTCGTaGCACTCTCACTACCTGATT +
Preference number: 4 (lower is better)
Translates to: YFIEVTGSTRYLSPALASRTAGS*HSHYLI
Trigger: AATCAGGTAGTGAGAGTGGCACGAACCAGCCGTTCT...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR GCA 90 bp GACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCATCATCCTGCAGGAGCTaGGGCGCCAAGATGAGTGGA +
Preference number: 4 (lower is better)
Translates to: DHEKYFIEVTGSTRYLSPSSCRS*GAKMSG
Trigger: TCCACTCATCTTGGCGCCGCAGCTCCTGCAGGATGA...TGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341747.8
CDS-3UTR CCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAAGGGATTTCACCTCGTaGTTGAAGAGACCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALRDFTS*LKRPRC
Trigger: GCACCGGGGTCTCTTCAACCACGAGGTGAAATCCCT...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCGCACGATGGCATCCCTaGCATCCTGAATCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPARWHP*HPESGS
Trigger: GGAACCTGATTCAGGATGCCAGGGATGCCATCGTGC...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCAAGGTGTGCACGATaGCATCCCTGGCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALARCAR*HPWHPE
Trigger: TTCAGGATGCCAGGGATGCCATCGTGCACACCTTGC...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTTGCCTCTCCTGCTCTaGGACTTGATCAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALALPLLL*DLIRAI
Trigger: AATAGCCCTGATCAAGTCCCAGAGCAGGAGAGGCAA...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTATGGGAGACTGGTCCCTaGGTATCCATGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALWETGP*VSMVSS
Trigger: AGAGGACACCATGGATACCCAGGGACCAGTCTCCCA...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595750.2
CDS-3UTR TCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAAGGGCATGGGGAAGGTaGACTCCTTTGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALRAWGR*TPLSLV
Trigger: AACAAGGGACAAAGGAGTTCACCTTCCCCATGCCCT...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCAGGGCATGGGGAAGGTaGACTCCTTTGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPARAWGR*TPLSLV
Trigger: AACAAGGGACAAAGGAGTTCACCTTCCCCATGCCCT...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAAGATGGCGAAGACAGTaGGGGAAAGTATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALRWRRQ*GKVWWP
Trigger: TGGCCACCATACTTTCCCTCACTGTCTTCGCCATCT...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCAGGCAGAAGTTGCAGTaGGTCACGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPARQKLQ*VTIVPL
Trigger: CAGTGGCACAATCGTGACTCACTGCAACTTCTGCCT...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR TCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAAGCATAGAGGCTAGCTaGGCTAGAGCCGACAAAGGA +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALSIEAS*ARADKG
Trigger: TCCTTTGTCGGCTCTAGCTCAGCTAGCCTCTATGCT...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR GCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCCCAGACGTGGTGGCATaGACCTGTAATTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPPDVVA*TCNSSY
Trigger: GTAGCTGGAATTACAGGTGCATGCCACCACGTCTGG...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR CCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAAAAAGGCTGGGAGACTaGTCCCTGGGTATCCATGGT +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALKRLGD*SLGIHG
Trigger: ACCATGGATACCCAGGGACCAGTCTCCCAGCCTTTT...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGAGGGATTTCACCTCGTaGTTGAAGAGACCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: TMKSTLLRSLGVQDICPQRDFTS*LKRPRC
Trigger: GCACCGGGGTCTCTTCAACCACGAGGTGAAATCCCT...CTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp GACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCAAGGTGTGCACGATaGCATCCCTGGCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: DHEKYFIEVTGSTRYLSPARCAR*HPWHPE
Trigger: TTCAGGATGCCAGGGATGCCATCGTGCACACCTTGC...TGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000499536.2
CDS-3UTR CCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGTACAGTCTCATGGGTaGAAAAGACCAGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALVQSHG*KRPGFR
Trigger: CCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTAC...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCCTCAGTACAGTCTCATaGGTGGAAAAGACCAGGCTT +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALALSTVS*VEKTRL
Trigger: AAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAG...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCATTAGCCAGACGTGGTaGCATGCACCTGTAATTCCA +
Preference number: 4 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAISQTW*HAPVIP
Trigger: TGGAATTACAGGTGCATGCCACCACGTCTGGCTAAT...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR TCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTCCTGCTCTGGGACTTaGTCAGGGCTATTAATCCAG +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPSCSGT*SGLLIQ
Trigger: CTGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGA...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp GACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAAGGGCATGGGGAAGGTaGACTCCTTTGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: DHEKYFIEVTGSTRYLSPRAWGR*TPLSLV
Trigger: AACAAGGGACAAAGGAGTTCACCTTCCCCATGCCCT...TGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000499536.2
CDS-3UTR TCA 90 bp GACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAAGATGGCGAAGACAGTaGGGGAAAGTATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: DHEKYFIEVTGSTRYLSPRWRRQ*GKVWWP
Trigger: TGGCCACCATACTTTCCCTCACTGTCTTCGCCATCT...TGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000499536.2
CDS-3UTR TCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCGGCAGGAGAATTGCTTaGACCCAGAAGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAGRRIA*TQKAEV
Trigger: AACTTCTGCCTTCTGGGTTCAAGCAATTCTCCTGCC...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR CCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCTTGCCTCTCCTGCTCTaGGACTTGATCAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPALPLLL*DLIRAI
Trigger: AATAGCCCTGATCAAGTCCCAGAGCAGGAGAGGCAA...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTATTGCCTCTCCTGCTCTaGGACTTGATCAGGGCTATT +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALLPLLL*DLIRAI
Trigger: AATAGCCCTGATCAAGTCCCAGAGCAGGAGAGGCAA...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CCA 90 bp ACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGGTACAGTCTCATGGGTaGAAAAGACCAGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: TMKSTLLRSLGVQDICPQVQSHG*KRPGFR
Trigger: CCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTAC...CTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR TCA 90 bp ACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGTCCTGCTCTGGGACTTaGTCAGGGCTATTAATCCAG +
Preference number: 4 (lower is better)
Translates to: TMKSTLLRSLGVQDICPQSCSGT*SGLLIQ
Trigger: CTGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGA...CTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR GCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTCACGATTGTGCCACTaGACTTCAGTCTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPSRLCH*TSVWAI
Trigger: TATTGCCCAGACTGAAGTGCAGTGGCACAATCGTGA...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR CCA 90 bp GACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCACTCAGTACAGTCTCATaGGTGGAAAAGACCAGGCTT +
Preference number: 4 (lower is better)
Translates to: DHEKYFIEVTGSTRYLSPLSTVS*VEKTRL
Trigger: AAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAG...TGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000499536.2
CDS-3UTR CCA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCAATAGGGAGATGTTTTaGGGTGTGGTGGGAATACTA +
Preference number: 4 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPNREMF*GVVGIL
Trigger: TAGTATTCCCACCACACCCCAAAACATCTCCCTATT...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR CCA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCGTATCCATGGTGTCCTaGAATATAAAGATAGGGTGG +
Preference number: 4 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAVSMVS*NIKIGW
Trigger: CCACCCTATCTTTATATTCCAGGACACCATGGATAC...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR CCA 90 bp GACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAAAAATTAGCCAGACGTaGTGGCATGCACCTGTAATT +
Preference number: 4 (lower is better)
Translates to: DHEKYFIEVTGSTRYLSPKISQT*WHAPVI
Trigger: AATTACAGGTGCATGCCACCACGTCTGGCTAATTTT...TGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR CCA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAAGATGTTTTGGGGTGTaGTGGGAATACTATTTAGAA +
Preference number: 4 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALRCFGV*WEYYLE
Trigger: TTCTAAATAGTATTCCCACCACACCCCAAAACATCT...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS TCA 90 bp CGCCGGTGCAGGACGTACAGGGCGACGGGCGCTGGATGTCCCTGGTaGGCGTTCCCACCTGGGATATTGAGGAGTCCGGGGGCGCGGGGG +
Preference number: 5 (lower is better)
Translates to: RRCRTYRATGAGCPW*AFPPGILRSPGARG
Trigger: CCCCCGCGCCCCCGGACTCCTCAATATCCCAGGTGGGAACGCTCACCAGGGACATCCAGCGCCCGTCGCCCTGTACGTCCTGCACCGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS TCA 90 bp GGGCCGACCCGACTCGCTCATCCTGCAGGAGCTGCGGCGCCAAGATaGGTGGAGAGGAGAACCCAGCCAGCAAGCCCACGCCGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: GPTRLAHPAGAAAPR*VERRTQPASPRRCR
Trigger: CCTGCACCGGCGTGGGCTTGCTGGCTGGGTTCTCCTCTCCACTCATCTTGGCGCCGCAGCTCCTGCAGGATGAGCGAGTCGGGTCGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS GCA 90 bp TCGGAACACTCCCGGGCCGACCCGACTCGCTCATCCTGCAGGAGCTaGGGCGCCAAGATGAGTGGAGAGGAGAACCCAGCCAGCAAGCCC +
Preference number: 5 (lower is better)
Translates to: SEHSRADPTRSSCRS*GAKMSGEENPASKP
Trigger: GGGCTTGCTGGCTGGGTTCTCCTCTCCACTCATCTTGGCGCCGCAGCTCCTGCAGGATGAGCGAGTCGGGTCGGCCCGGGAGTGTTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS GCA 90 bp CAGCTCCGTTCGGAACACTCCCGGGCCGACCCGACTCGCTCATCCTaGAGGAGCTGCGGCGCCAAGATGAGTGGAGAGGAGAACCCAGCC +
Preference number: 5 (lower is better)
Translates to: QLRSEHSRADPTRSS*RSCGAKMSGEENPA
Trigger: GGCTGGGTTCTCCTCTCCACTCATCTTGGCGCCGCAGCTCCTGCAGGATGAGCGAGTCGGGTCGGCCCGGGAGTGTTCCGAACGGAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS CCA 90 bp GCCAGCAAGCCCACGCCGGTGCAGGACGTACAGGGCGACGGGCGCTaGATGTCCCTGGTGAGCGTTCCCACCTGGGATATTGAGGAGTCC +
Preference number: 5 (lower is better)
Translates to: ASKPTPVQDVQGDGR*MSLVSVPTWDIEES
Trigger: GGACTCCTCAATATCCCAGGTGGGAACGCTCACCAGGGACATCCAGCGCCCGTCGCCCTGTACGTCCTGCACCGGCGTGGGCTTGCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS CCA 90 bp CGACCCGACTCGCTCATCCTGCAGGAGCTGCGGCGCCAAGATGAGTaGAGAGGAGAACCCAGCCAGCAAGCCCACGCCGGTGCAGGACGT +
Preference number: 5 (lower is better)
Translates to: RPDSLILQELRRQDE*RGEPSQQAHAGAGR
Trigger: ACGTCCTGCACCGGCGTGGGCTTGCTGGCTGGGTTCTCCTCTCCACTCATCTTGGCGCCGCAGCTCCTGCAGGATGAGCGAGTCGGGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS CCA 90 bp AACTCTGGGGAACTGGGTGGGCCTGGGCCCGAACCTCCAGGCACCTaGTTCTCTTTGTCCCTGGACCGTGGGGCTGGTTCCTGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: NSGELGGPGPEPPGT*FSLSLDRGAGSWAL
Trigger: CAGGGCCCAGGAACCAGCCCCACGGTCCAGGGACAAAGAGAACCAGGTGCCTGGAGGTTCGGGCCCAGGCCCACCCAGTTCCCCAGAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CCA 90 bp TCCCTGGGTATCCATGGTGTCCTCCTAAGTGAAGGCTTCCGTCCCTaGAGAGGAGGCGGCGCCCTGTATCGGCCTTCGTCCTCCGCGGGT +
Preference number: 5 (lower is better)
Translates to: SLGIHGVLLSEGFRP*RGGGALYRPSSSAG
Trigger: ACCCGCGGAGGACGAAGGCCGATACAGGGCGCCGCCTCCTCTCCAGGGACGGAAGCCTTCACTTAGGAGGACACCATGGATACCCAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS CCA 90 bp GTAGGGACCACAGGTGGATCCCGAATGGCCACAGGAGGATCGTGGTaGGCTAATGGCCGGCGGCTGCCCACCAGGGCCTTGTTACGTTCC +
Preference number: 5 (lower is better)
Translates to: VGTTGGSRMATGGSW*ANGRRLPTRALLRS
Trigger: GGAACGTAACAAGGCCCTGGTGGGCAGCCGCCGGCCATTAGCCCACCACGATCCTCCTGTGGCCATTCGGGATCCACCTGTGGTCCCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CCA 90 bp GCAGTAGGGACCACAGGTGGATCCCGAATGGCCACAGGAGGATCGTaGTGGGCTAATGGCCGGCGGCTGCCCACCAGGGCCTTGTTACGT +
Preference number: 5 (lower is better)
Translates to: AVGTTGGSRMATGGS*WANGRRLPTRALLR
Trigger: ACGTAACAAGGCCCTGGTGGGCAGCCGCCGGCCATTAGCCCACCACGATCCTCCTGTGGCCATTCGGGATCCACCTGTGGTCCCTACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CCA 90 bp ACCTCGTGGTTGAAGAGACCCCGGTGCTCCCGGCTCAGCCGGCCCTaGGTTATGACCACGAGCTTGGAGGCAGTAGGGACCACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: TSWLKRPRCSRLSRP*VMTTSLEAVGTTGG
Trigger: TCCACCTGTGGTCCCTACTGCCTCCAAGCTCGTGGTCATAACCCAGGGCCGGCTGAGCCGGGAGCACCGGGGTCTCTTCAACCACGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp GGGGACCCCAGGCTGTTCCAGATGGCGAAGACAGTGAGGGAAAGTATGGTGGCCTGGGACGGTCCTTTGTaGCCGCGAGGGGTAGGAGTG +
Preference number: 5 (lower is better)
Translates to: GDPRLFQMAKTVRESMVAWDGPL*PRGVGV
Trigger: CACTCCTACCCCTCGCGGCAACAAAGGACCGTCCCA...GGCCACCATACTTTCCCTCACTGTCTTCGCCATCTGGAACAGCCTGGGGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CAA 90 bp CTCAGCCTCTCCTCAGTACAGTCTCATGGGTGGAAAAGACCAGGCTTCCGGACTGTGGCCAGGGACCTCTaGGCGGTGCCAGACTCCCCC +
Preference number: 5 (lower is better)
Translates to: LSLSSVQSHGWKRPGFRTVARDL*AVPDSP
Trigger: GGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCAC...AGTCCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAGGAGAGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS CCA 90 bp GTCCCACTGCTAAGCAGCCTTGCAACATCTAGGGATTTCACCTCGTaGTTGAAGAGACCCCGGTGCTCCCGGCTCAGCCGGCCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: VPLLSSLATSRDFTS*LKRPRCSRLSRPWV
Trigger: AACCCAGGGCCGGCTGAGCCGGGAGCACCGGGGTCTCTTCAACCACGAGGTGAAATCCCTAGATGTTGCAAGGCTGCTTAGCAGTGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS TCA 90 bp CGCCTAGTCTTCCGACGACGGACACGACCAGGTTTCTCAGGCTGCTaGAAAGGCTGGGAGACTGGTCCCTGGGTATCCATGGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: RLVFRRRTRPGFSGC*KGWETGPWVSMVSS
Trigger: GGAGGACACCATGGATACCCAGGGACCAGTCTCCCAGCCTTTTCAGCAGCCTGAGAAACCTGGTCGTGTCCGTCGTCGGAAGACTAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS TCA 90 bp CGCCTAGTCTTCCGACGACGGACACGACCAGGTTTCTCAGGCTGCTaGAAAGGCTGGGAGACTGGTCCCTGGGTATCCATGGTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RLVFRRRTRPGFSGC*KGWETGPWVSMVSW
Trigger: CCAGGACACCATGGATACCCAGGGACCAGTCTCCCAGCCTTTTCAGCAGCCTGAGAAACCTGGTCGTGTCCGTCGTCGGAAGACTAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS GCA 90 bp CTTGCAACATCTAGGGATTTCACCTCGTGGTTGAAGAGACCCCGGTaGTCCCGGCTCAGCCGGCCCTGGGTTATGACCACGAGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LATSRDFTSWLKRPR*SRLSRPWVMTTSLE
Trigger: CTCCAAGCTCGTGGTCATAACCCAGGGCCGGCTGAGCCGGGAGCACCGGGGTCTCTTCAACCACGAGGTGAAATCCCTAGATGTTGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CCA 90 bp GCACACAACCATGACAGGCCTGCAAGGTGTGCACGATGGCATCCCTaGCATCCTGAATCAGGTTCCTCCGGGGGAAGGCCTGTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: AHNHDRPARCARWHP*HPESGSSGGRPVAN
Trigger: GTTTGCCACAGGCCTTCCCCCGGAGGAACCTGATTCAGGATGCCAGGGATGCCATCGTGCACACCTTGCAGGCCTGTCATGGTTGTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CCA 90 bp CAAGGTCAGGCACACAACCATGACAGGCCTGCAAGGTGTGCACGATaGCATCCCTGGCATCCTGAATCAGGTTCCTCCGGGGGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: QGQAHNHDRPARCAR*HPWHPESGSSGGRP
Trigger: AGGCCTTCCCCCGGAGGAACCTGATTCAGGATGCCAGGGATGCCATCGTGCACACCTTGCAGGCCTGTCATGGTTGTGTGCCTGACCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS TCA 90 bp CGCCTAGTCTTCCGACGACGGACACGACCAGGTTTCTCAGGCTGCTaGAAAGGCTGGGAGACTGGTCCCTGGGTATCCATGGTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: RLVFRRRTRPGFSGC*KGWETGPWVSMVSS
Trigger: AGAGGACACCATGGATACCCAGGGACCAGTCTCCCAGCCTTTTCAGCAGCCTGAGAAACCTGGTCGTGTCCGTCGTCGGAAGACTAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595750.2
CDS-3UTR CAA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTTTCCCACCTGGGATATaGAGGAGTCCGGGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: IEVTGSTRYLSPALASASFPPGI*RSPGAR
Trigger: CCGCGCCCCCGGACTCCTCAATATCCCAGGTGGGAA...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR CAA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCAGAGACCCCAGGCTaGGCCCCTGGCAAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: FIEVTGSTRYLSPALASASETPG*APGKGG
Trigger: GCCACCCTTGCCAGGGGCCAAGCCTGGGGTCTCTGA...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
CDS-3UTR CAA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTCTGCCCACCAGGGCCTaGTTACGTTCCCGCCTAGTC +
Preference number: 5 (lower is better)
Translates to: IEVTGSTRYLSPALASASLPTRA*LRSRLV
Trigger: GACTAGGCGGGAACGTAACAAGGCCCTGGTGGGCAG...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp CATGCTGGAGGTGTAGGGCATGGGGAAGGTGAACTCCTTTGTCCCTTGTTGCTTCTGCCCACCAGGGCCTaGTTACGTTCCCGCCTAGTC +
Preference number: 5 (lower is better)
Translates to: HAGGVGHGEGELLCPLLLLPTRA*LRSRLV
Trigger: GACTAGGCGGGAACGTAACAAGGCCCTGGTGGGCAG...AAGCAACAAGGGACAAAGGAGTTCACCTTCCCCATGCCCTACACCTCCAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CAA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTGGCACCTGGTTCTCTTaGTCCCTGGACCGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: IEVTGSTRYLSPALASASGTWFS*SLDRGA
Trigger: AGCCCCACGGTCCAGGGACAAAGAGAACCAGGTGCC...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp GTGAGGGAAAGTATGGTGGCCAGGGACCTCTTGGCGGTGCCAGACTCCCCCTGTGAACTCCTTTGTCCCTaGTTGCTTCCTTTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: VRESMVARDLLAVPDSPCELLCP*LLPLPL
Trigger: GAGAGGCAAAGGAAGCAACAAGGGACAAAGGAGTTC...ACAGGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCACCATACTTTCCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CAA 90 bp CTTCCTTTGCCTCTCCTGCTCTGGGACTTGATCAGGGCTATTAATCCAGAAGGGGCGGGTGTGCTAGCGTaGGGACGGTCCTTTGTTGCC +
Preference number: 5 (lower is better)
Translates to: LPLPLLLWDLIRAINPEGAGVLA*GRSFVA
Trigger: GGCAACAAAGGACCGTCCCAACGCTAGCACACCCGC...CCCTTCTGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGAGAGGCAAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CAA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCGGCACCTGGTTCTCTTaGTCCCTGGACCGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: FIEVTGSTRYLSPALASAGTWFS*SLDRGA
Trigger: AGCCCCACGGTCCAGGGACAAAGAGAACCAGGTGCC...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCATCAGAGACCCCAGGCTaGGCCCCTGGCAAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: YFIEVTGSTRYLSPALASSETPG*APGKGG
Trigger: GCCACCCTTGCCAGGGGCCAAGCCTGGGGTCTCTGA...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
CDS-3UTR CAA 90 bp CTCAGCCTCTCCTCAGTACAGTCTCATGGGTGGAAAAGACCAGGCTTCCGGACTACAAGTCAAACGCTGTaGGGGGACCCCAGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LSLSSVQSHGWKRPGFRTTSQTL*GDPRLF
Trigger: GAACAGCCTGGGGTCCCCCAACAGCGTTTGACTTGT...AGTCCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAGGAGAGGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CAA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTTCCCACCTGGGATATaGAGGAGTCCGGGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: KYFIEVTGSTRYLSPALAFPPGI*RSPGAR
Trigger: CCGCGCCCCCGGACTCCTCAATATCCCAGGTGGGAA...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR CAA 90 bp CCTCTCCTCAGTACAGTCTCATGGGTGGAAAAGACCAGGCTTCCGGACTGCTCTGTTATGACCACGAGCTaGGAGGCAGTAGGGACCACA +
Preference number: 5 (lower is better)
Translates to: PLLSTVSWVEKTRLPDCSVMTTS*EAVGTT
Trigger: TGTGGTCCCTACTGCCTCCAAGCTCGTGGTCATAAC...AGAGCAGTCCGGAAGCCTGGTCTTTTCCACCCATGAGACTGTACTGAGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CAA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTGATTTCACCTCGTGGTaGAAGAGACCCCGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: IEVTGSTRYLSPALASASDFTSW*KRPRCS
Trigger: GGAGCACCGGGGTCTCTTCAACCACGAGGTGAAATC...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp CCCCAGGCTGTTCCAGATGGCGAAGACAGTGAGGGAAAGTATGGTGGCCAGGGACTCCTGCTCTGGGACTaGATCAGGGCTATTAATCCA +
Preference number: 5 (lower is better)
Translates to: PQAVPDGEDSEGKYGGQGLLLWD*IRAINP
Trigger: TGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGAG...TCCCTGGCCACCATACTTTCCCTCACTGTCTTCGCCATCTGGAACAGCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CAA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCGTGGCCAGGGACCTCTaGGCGGTGCCAGACTCCCCC +
Preference number: 5 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPVARDL*AVPDSP
Trigger: GGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCAC...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTACAAGTCAAACGCTGTaGGGGGACCCCAGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: IEVTGSTRYLSPALASASTSQTL*GDPRLF
Trigger: GAACAGCCTGGGGTCCCCCAACAGCGTTTGACTTGT...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTGTTATGACCACGAGCTaGGAGGCAGTAGGGACCACA +
Preference number: 5 (lower is better)
Translates to: IEVTGSTRYLSPALASASVMTTS*EAVGTT
Trigger: TGTGGTCCCTACTGCCTCCAAGCTCGTGGTCATAAC...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCGATTTCACCTCGTGGTaGAAGAGACCCCGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: FIEVTGSTRYLSPALASADFTSW*KRPRCS
Trigger: GGAGCACCGGGGTCTCTTCAACCACGAGGTGAAATC...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGGCACCTGGTTCTCTTaGTCCCTGGACCGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: YFIEVTGSTRYLSPALASGTWFS*SLDRGA
Trigger: AGCCCCACGGTCCAGGGACAAAGAGAACCAGGTGCC...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp ACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGGTGGCCAGGGACCTCTaGGCGGTGCCAGACTCCCCC +
Preference number: 5 (lower is better)
Translates to: TMKSTLLRSLGVQDICPQVARDL*AVPDSP
Trigger: GGGGGAGTCTGGCACCGCCAAGAGGTCCCTGGCCAC...CTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCTGGGACGGTCCTTTGTaGCCGCGAGGGGTAGGAGTG +
Preference number: 5 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAWDGPL*PRGVGV
Trigger: CACTCCTACCCCTCGCGGCAACAAAGGACCGTCCCA...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR CAA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCGCGGGTGTGCTAGCGTaGGGACGGTCCTTTGTTGCC +
Preference number: 5 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPAGVLA*GRSFVA
Trigger: GGCAACAAAGGACCGTCCCAACGCTAGCACACCCGC...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR CAA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTACTGCCCACCAGGGCCTaGTTACGTTCCCGCCTAGTC +
Preference number: 5 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALLPTRA*LRSRLV
Trigger: GACTAGGCGGGAACGTAACAAGGCCCTGGTGGGCAG...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTGCCCACCAGGGCCTaGTTACGTTCCCGCCTAGTC +
Preference number: 5 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPALPTRA*LRSRLV
Trigger: GACTAGGCGGGAACGTAACAAGGCCCTGGTGGGCAG...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp AAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCACAAGTCAAACGCTGTaGGGGGACCCCAGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: KYFIEVTGSTRYLSPALATSQTL*GDPRLF
Trigger: GAACAGCCTGGGGTCCCCCAACAGCGTTTGACTTGT...GGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp ATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCTCTCTGAAAATACAAAAATaGGCCAGCCGCAGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: IEVTGSTRYLSPALASASLKIQK*ASRSGP
Trigger: TGGGCCACTGCGGCTGGCCAATTTTTGTATTTTCAG...AGAGGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000499536.2
CDS-3UTR CAA 90 bp ACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCGTTGGGACGGTCCTTaGTTGCCGCGAGGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: TMKSTLLRSLGVQDICPQRWDGP*LPRGVG
Trigger: TCCTACCCCTCGCGGCAACAAAGGACCGTCCCAACG...CTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS-3UTR CAA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCGAACTCCTTTGTCCCTaGTTGCTTCCTTTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: FIEVTGSTRYLSPALASAELLCP*LLPLPL
Trigger: GAGAGGCAAAGGAAGCAACAAGGGACAAAGGAGTTC...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGATTTCACCTCGTGGTaGAAGAGACCCCGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALDFTSW*KRPRCS
Trigger: GGAGCACCGGGGTCTCTTCAACCACGAGGTGAAATC...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCGATTTCACCTCGTGGTaGAAGAGACCCCGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPDFTSW*KRPRCS
Trigger: GGAGCACCGGGGTCTCTTCAACCACGAGGTGAAATC...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCACAAGTCAAACGCTGTaGGGGGACCCCAGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPTSQTL*GDPRLF
Trigger: GAACAGCCTGGGGTCCCCCAACAGCGTTTGACTTGT...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp ATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCGTTATGACCACGAGCTaGGAGGCAGTAGGGACCACA +
Preference number: 5 (lower is better)
Translates to: MKSTLLRSLGVQDICPQPVMTTS*EAVGTT
Trigger: TGTGGTCCCTACTGCCTCCAAGCTCGTGGTCATAAC...GGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp GAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGTTATGACCACGAGCTaGGAGGCAGTAGGGACCACA +
Preference number: 5 (lower is better)
Translates to: EKYFIEVTGSTRYLSPALVMTTS*EAVGTT
Trigger: TGTGGTCCCTACTGCCTCCAAGCTCGTGGTCATAAC...TAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCACTCCTGCTCTGGGACTaGATCAGGGCTATTAATCCA +
Preference number: 5 (lower is better)
Translates to: YFIEVTGSTRYLSPALASLLLWD*IRAINP
Trigger: TGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGAG...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp ACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCTCCTGCTCTGGGACTaGATCAGGGCTATTAATCCA +
Preference number: 5 (lower is better)
Translates to: TMKSTLLRSLGVQDICPQLLLWD*IRAINP
Trigger: TGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGAG...CTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp GACCATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGAACTCCTTTGTCCCTaGTTGCTTCCTTTGCCTCTC +
Preference number: 5 (lower is better)
Translates to: DHEKYFIEVTGSTRYLSPELLCP*LLPLPL
Trigger: GAGAGGCAAAGGAAGCAACAAGGGACAAAGGAGTTC...TGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000499536.2
CDS-3UTR CAA 90 bp TTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAGCCATGAAAAGTACTTTATaGAGGTCACTGGGAGTACAA +
Preference number: 5 (lower is better)
Translates to: FIEVTGSTRYLSPALASAMKSTL*RSLGVQ
Trigger: TTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT...GGCTGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp TACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCCTAGCCTCAATGAAAAGTACTTTATaGAGGTCACTGGGAGTACAA +
Preference number: 5 (lower is better)
Translates to: YFIEVTGSTRYLSPALASMKSTL*RSLGVQ
Trigger: TTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT...TGAGGCTAGGGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS-3UTR CAA 90 bp CTCCTGCTCTGGGACTTGATCAGGGCTATTAATCCAGAAGGGTGTCATCTTTCTATGAAAAGTACTTTATaGAGGTCACTGGGAGTACAA +
Preference number: 5 (lower is better)
Translates to: LLLWDLIRAINPEGCHLSMKSTL*RSLGVQ
Trigger: TTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT...AGAAAGATGACACCCTTCTGGATTAATAGCCCTGATCAAGTCCCAGAGCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS-3UTR CAA 90 bp CATGAAAAGTACTTTATTGAGGTCACTGGGAGTACAAGATATCTGTCCCCAGCCATGAAAAGTACTTTATaGAGGTCACTGGGAGTACAA +
Preference number: 5 (lower is better)
Translates to: HEKYFIEVTGSTRYLSPAMKSTL*RSLGVQ
Trigger: TTGTACTCCCAGTGACCTCAATAAAGTACTTTTCAT...GGCTGGGGACAGATATCTTGTACTCCCAGTGACCTCAATAAAGTACTTTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CAA 90 bp GGCGGCGCCCTGTATCGGCCTTCGTCCTCCGCGGGTGTGCTAGCGTaGGGACGGTCCTTTGTTGCCGCGAGGGGTAGGAGTGGGCGTGGC +
Preference number: 6 (lower is better)
Translates to: GGALYRPSSSAGVLA*GRSFVAARGRSGRG
Trigger: GCCACGCCCACTCCTACCCCTCGCGGCAACAAAGGACCGTCCCAACGCTAGCACACCCGCGGAGGACGAAGGCCGATACAGGGCGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS GCA 72 bp GTGGAGAGGAGAACCCAGCCAGCAAGCCCACGCCGGTaGAGGACGTACAGGGCGACGGGCGCTGGATGTCCC +
Preference number: 6 (lower is better)
Translates to: VERRTQPASPRR*RTYRATGAGCP
Trigger: GGGACATCCAGCGCCCGTCGCCCTGTACGTCCTGCACCGGCGTGGGCTTGCTGGCTGGGTTCTCCTCTCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS CAA 90 bp GAACTGGGTGGGCCTGGGCCCGAACCTCCAGGCACCTGGTTCTCTTaGTCCCTGGACCGTGGGGCTGGTTCCTGGGCCCTGCCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: ELGGPGPEPPGTWFS*SLDRGAGSWALPGL
Trigger: AAGCCCAGGCAGGGCCCAGGAACCAGCCCCACGGTCCAGGGACAAAGAGAACCAGGTGCCTGGAGGTTCGGGCCCAGGCCCACCCAGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS GCA 72 bp TCCCGGGCCGACCCGACTCGCTCATCCTGCAGGAGCTaGGGCGCCAAGATGAGTGGAGAGGAGAACCCAGCC +
Preference number: 6 (lower is better)
Translates to: SRADPTRSSCRS*GAKMSGEENPA
Trigger: GGCTGGGTTCTCCTCTCCACTCATCTTGGCGCCGCAGCTCCTGCAGGATGAGCGAGTCGGGTCGGCCCGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS CCA 72 bp ACCACAGGTGGATCCCGAATGGCCACAGGAGGATCGTaGTGGGCTAATGGCCGGCGGCTGCCCACCAGGGCC +
Preference number: 6 (lower is better)
Translates to: TTGGSRMATGGS*WANGRRLPTRA
Trigger: GGCCCTGGTGGGCAGCCGCCGGCCATTAGCCCACCACGATCCTCCTGTGGCCATTCGGGATCCACCTGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CAA 90 bp CCCCGGTGCTCCCGGCTCAGCCGGCCCTGGGTTATGACCACGAGCTaGGAGGCAGTAGGGACCACAGGTGGATCCCGAATGGCCACAGGA +
Preference number: 6 (lower is better)
Translates to: PRCSRLSRPWVMTTS*EAVGTTGGSRMATG
Trigger: TCCTGTGGCCATTCGGGATCCACCTGTGGTCCCTACTGCCTCCAAGCTCGTGGTCATAACCCAGGGCCGGCTGAGCCGGGAGCACCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS GCA 72 bp TCGGAACACTCCCGGGCCGACCCGACTCGCTCATCCTaGAGGAGCTGCGGCGCCAAGATGAGTGGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: SEHSRADPTRSS*RSCGAKMSGEE
Trigger: CTCCTCTCCACTCATCTTGGCGCCGCAGCTCCTGCAGGATGAGCGAGTCGGGTCGGCCCGGGAGTGTTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS CCA 72 bp CCCACGCCGGTGCAGGACGTACAGGGCGACGGGCGCTaGATGTCCCTGGTGAGCGTTCCCACCTGGGATATT +
Preference number: 6 (lower is better)
Translates to: PTPVQDVQGDGR*MSLVSVPTWDI
Trigger: AATATCCCAGGTGGGAACGCTCACCAGGGACATCCAGCGCCCGTCGCCCTGTACGTCCTGCACCGGCGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS CCA 72 bp ACAGGTGGATCCCGAATGGCCACAGGAGGATCGTGGTaGGCTAATGGCCGGCGGCTGCCCACCAGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: TGGSRMATGGSW*ANGRRLPTRAL
Trigger: CAAGGCCCTGGTGGGCAGCCGCCGGCCATTAGCCCACCACGATCCTCCTGTGGCCATTCGGGATCCACCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CCA 72 bp GAACTGGGTGGGCCTGGGCCCGAACCTCCAGGCACCTaGTTCTCTTTGTCCCTGGACCGTGGGGCTGGTTCC +
Preference number: 6 (lower is better)
Translates to: ELGGPGPEPPGT*FSLSLDRGAGS
Trigger: GGAACCAGCCCCACGGTCCAGGGACAAAGAGAACCAGGTGCCTGGAGGTTCGGGCCCAGGCCCACCCAGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CAA 90 bp GGAGGATCGTGGTGGGCTAATGGCCGGCGGCTGCCCACCAGGGCCTaGTTACGTTCCCGCCTAGTCTTCCGACGACGGACACGACCAGGT +
Preference number: 6 (lower is better)
Translates to: GGSWWANGRRLPTRA*LRSRLVFRRRTRPG
Trigger: ACCTGGTCGTGTCCGTCGTCGGAAGACTAGGCGGGAACGTAACAAGGCCCTGGTGGGCAGCCGCCGGCCATTAGCCCACCACGATCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS TCA 72 bp AGGACGTACAGGGCGACGGGCGCTGGATGTCCCTGGTaGGCGTTCCCACCTGGGATATTGAGGAGTCCGGGG +
Preference number: 6 (lower is better)
Translates to: RTYRATGAGCPW*AFPPGILRSPG
Trigger: CCCCGGACTCCTCAATATCCCAGGTGGGAACGCTCACCAGGGACATCCAGCGCCCGTCGCCCTGTACGTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS CCA 72 bp TCGCTCATCCTGCAGGAGCTGCGGCGCCAAGATGAGTaGAGAGGAGAACCCAGCCAGCAAGCCCACGCCGGT +
Preference number: 6 (lower is better)
Translates to: SLILQELRRQDE*RGEPSQQAHAG
Trigger: ACCGGCGTGGGCTTGCTGGCTGGGTTCTCCTCTCCACTCATCTTGGCGCCGCAGCTCCTGCAGGATGAGCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS CAA 72 bp TGGTGGGCTAATGGCCGGCGGCTGCCCACCAGGGCCTaGTTACGTTCCCGCCTAGTCTTCCGACGACGGACA +
Preference number: 6 (lower is better)
Translates to: WWANGRRLPTRA*LRSRLVFRRRT
Trigger: TGTCCGTCGTCGGAAGACTAGGCGGGAACGTAACAAGGCCCTGGTGGGCAGCCGCCGGCCATTAGCCCACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CAA 72 bp CTGTATCGGCCTTCGTCCTCCGCGGGTGTGCTAGCGTaGGGACGGTCCTTTGTTGCCGCGAGGGGTAGGAGT +
Preference number: 6 (lower is better)
Translates to: LYRPSSSAGVLA*GRSFVAARGRS
Trigger: ACTCCTACCCCTCGCGGCAACAAAGGACCGTCCCAACGCTAGCACACCCGCGGAGGACGAAGGCCGATACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS CAA 72 bp TCCCGGCTCAGCCGGCCCTGGGTTATGACCACGAGCTaGGAGGCAGTAGGGACCACAGGTGGATCCCGAATG +
Preference number: 6 (lower is better)
Translates to: SRLSRPWVMTTS*EAVGTTGGSRM
Trigger: CATTCGGGATCCACCTGTGGTCCCTACTGCCTCCAAGCTCGTGGTCATAACCCAGGGCCGGCTGAGCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS TCA 72 bp GCAGCCTTGCAACATCTAGGGATTTCACCTCGTGGTTaGAGAGACCCCGGTGCTCCCGGCTCAGCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: AALQHLGISPRG*RDPGAPGSAGP
Trigger: AGGGCCGGCTGAGCCGGGAGCACCGGGGTCTCTTCAACCACGAGGTGAAATCCCTAGATGTTGCAAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS TCA 72 bp CCCCGAAGCACCAGGGCAAGGTCAGGCACACAACCATaGCAGGCCTGCAAGGTGTGCACGATGGCATCCCTG +
Preference number: 6 (lower is better)
Translates to: PRSTRARSGTQP*QACKVCTMASL
Trigger: CAGGGATGCCATCGTGCACACCTTGCAGGCCTGTCATGGTTGTGTGCCTGACCTTGCCCTGGTGCTTCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS GCA 72 bp TCTAGGGATTTCACCTCGTGGTTGAAGAGACCCCGGTaGTCCCGGCTCAGCCGGCCCTGGGTTATGACCACG +
Preference number: 6 (lower is better)
Translates to: SRDFTSWLKRPR*SRLSRPWVMTT
Trigger: CGTGGTCATAACCCAGGGCCGGCTGAGCCGGGAGCACCGGGGTCTCTTCAACCACGAGGTGAAATCCCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CCA 72 bp ATCCATGGTGTCCTCCTAAGTGAAGGCTTCCGTCCCTaGAGAGGAGGCGGCGCCCTGTATCGGCCTTCGTCC +
Preference number: 6 (lower is better)
Translates to: IHGVLLSEGFRP*RGGGALYRPSS
Trigger: GGACGAAGGCCGATACAGGGCGCCGCCTCCTCTCCAGGGACGGAAGCCTTCACTTAGGAGGACACCATGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341747.8
ENST00000598490.1
CDS TCA 72 bp GCCTGCAAGGTGTGCACGATGGCATCCCTGGCATCCTaGATCAGGTTCCTCCGGGGGAAGGCCTGTGGCAAA +
Preference number: 6 (lower is better)
Translates to: ACKVCTMASLAS*IRFLRGKACGK
Trigger: TTTGCCACAGGCCTTCCCCCGGAGGAACCTGATTCAGGATGCCAGGGATGCCATCGTGCACACCTTGCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CCA 72 bp TATGACCACGAGCTTGGAGGCAGTAGGGACCACAGGTaGATCCCGAATGGCCACAGGAGGATCGTGGTGGGC +
Preference number: 6 (lower is better)
Translates to: YDHELGGSRDHR*IPNGHRRIVVG
Trigger: GCCCACCACGATCCTCCTGTGGCCATTCGGGATCCACCTGTGGTCCCTACTGCCTCCAAGCTCGTGGTCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CCA 72 bp GGCATCCTGAATCAGGTTCCTCCGGGGGAAGGCCTGTaGCAAACTCAGCTGACACTGCAGCTCTGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: GILNQVPPGEGL*QTQLTLQLCQQ
Trigger: CTGCTGGCAGAGCTGCAGTGTCAGCTGAGTTTGCCACAGGCCTTCCCCCGGAGGAACCTGATTCAGGATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CCA 72 bp CATGACAGGCCTGCAAGGTGTGCACGATGGCATCCCTaGCATCCTGAATCAGGTTCCTCCGGGGGAAGGCCT +
Preference number: 6 (lower is better)
Translates to: HDRPARCARWHP*HPESGSSGGRP
Trigger: AGGCCTTCCCCCGGAGGAACCTGATTCAGGATGCCAGGGATGCCATCGTGCACACCTTGCAGGCCTGTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CAA 90 bp CCACTGCTAAGCAGCCTTGCAACATCTAGGGATTTCACCTCGTGGTaGAAGAGACCCCGGTGCTCCCGGCTCAGCCGGCCCTGGGTTATG +
Preference number: 6 (lower is better)
Translates to: PLLSSLATSRDFTSW*KRPRCSRLSRPWVM
Trigger: CATAACCCAGGGCCGGCTGAGCCGGGAGCACCGGGGTCTCTTCAACCACGAGGTGAAATCCCTAGATGTTGCAAGGCTGCTTAGCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CCA 72 bp CTAAGCAGCCTTGCAACATCTAGGGATTTCACCTCGTaGTTGAAGAGACCCCGGTGCTCCCGGCTCAGCCGG +
Preference number: 6 (lower is better)
Translates to: LSSLATSRDFTS*LKRPRCSRLSR
Trigger: CCGGCTGAGCCGGGAGCACCGGGGTCTCTTCAACCACGAGGTGAAATCCCTAGATGTTGCAAGGCTGCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS CCA 72 bp GCACACAACCATGACAGGCCTGCAAGGTGTGCACGATaGCATCCCTGGCATCCTGAATCAGGTTCCTCCGGG +
Preference number: 6 (lower is better)
Translates to: AHNHDRPARCAR*HPWHPESGSSG
Trigger: CCCGGAGGAACCTGATTCAGGATGCCAGGGATGCCATCGTGCACACCTTGCAGGCCTGTCATGGTTGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341747.8
ENST00000499536.2
ENST00000595750.2
ENST00000598490.1
CDS TCA 72 bp GCCCCTGGCACAGAGGAAAGAAGCATAGAGGCTAGCTaGGCTAGAGCCGACAAAGGAAAGGGGAGTACAGGG +
Preference number: 6 (lower is better)
Translates to: APGTEERSIEAS*ARADKGKGSTG
Trigger: CCCTGTACTCCCCTTTCCTTTGTCGGCTCTAGCTCAGCTAGCCTCTATGCTTCTTTCCTCTGTGCCAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598490.1
CDS CCA 72 bp GGCTGGGAGACTGGTCCCTGGGTATCCATGGTGTCCTaGAATATAAAGATAGGGTGGCCATCAGCATGCAGA +
Preference number: 6 (lower is better)
Translates to: GWETGPWVSMVS*NIKIGWPSACR
Trigger: TCTGCATGCTGATGGCCACCCTATCTTTATATTCCAGGACACCATGGATACCCAGGGACCAGTCTCCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499536.2