RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRR14L (Homo sapiens)

Ensembl gene IDs: ENSG00000183530

Ensembl transcript IDs: ENST00000327423.11, ENST00000330495.8, ENST00000412743.1, ENST00000431684.1, ENST00000432485.1, ENST00000461722.1, ENST00000492705.1

Found 1003 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACCGCGGCCTTGGATCTGCTGCTCCCGTCCTGTACGCTCCCTGCTaGTCTTGGCTCAGTGGGCAAGGAAGGAGCCACGGGGGAGGTCTC +
Preference number: 1 (lower is better)
Translates to: HRGLGSAAPVLYAPC*SWLSGQGRSHGGGL
Trigger: GAGACCTCCCCCGTGGCTCCTTCCTTGCCCACTGAGCCAAGAGCAGCAGGGAGCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR GCA 90 bp CTGCACCGCGGCCTTGGATCTGCTGCTCCCGTCCTGTACGCTCCCTaGTGCTCTTGGCTCAGTGGGCAAGGAAGGAGCCACGGGGGAGGT +
Preference number: 1 (lower is better)
Translates to: LHRGLGSAAPVLYAP*CSWLSGQGRSHGGG
Trigger: ACCTCCCCCGTGGCTCCTTCCTTGCCCACTGAGCCAAGAGCAGCAGGGAGCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 90 bp GGCCTTGGATCTGCTGCTCCCGTCCTGTACGCTCCCTGCTGCTCTTaGCTCAGTGGGCAAGGAAGGAGCCACGGGGGAGGTCTCACGCCC +
Preference number: 1 (lower is better)
Translates to: GLGSAAPVLYAPCCS*LSGQGRSHGGGLTP
Trigger: GGGCGTGAGACCTCCCCCGTGGCTCCTTCCTTGCCCACTGAGCCAAGAGCAGCAGGGAGCGTACAGGACGGGAGCAGCAGATCCAAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR GCA 90 bp GCGACGGCCGTGCATTCATTGGCTGCACCGCGGCCTTGGATCTGCTaGTCCCGTCCTGTACGCTCCCTGCTGCTCTTGGCTCAGTGGGCA +
Preference number: 1 (lower is better)
Translates to: ATAVHSLAAPRPWIC*SRPVRSLLLLAQWA
Trigger: TGCCCACTGAGCCAAGAGCAGCAGGGAGCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR GCA 90 bp GGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGCCTTGGATCTaGTGCTCCCGTCCTGTACGCTCCCTGCTGCTCTTGGCTCAGTGG +
Preference number: 1 (lower is better)
Translates to: GATAVHSLAAPRPWI*CSRPVRSLLLLAQW
Trigger: CCACTGAGCCAAGAGCAGCAGGGAGCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 90 bp GGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGCCTTaGATCTGCTGCTCCCGTCCTGTACGCTCCCTGCTGCTCTTGGCT +
Preference number: 1 (lower is better)
Translates to: GDGATAVHSLAAPRP*ICCSRPVRSLLLLA
Trigger: AGCCAAGAGCAGCAGGGAGCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR GCA 90 bp GGAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTaGACCGCGGCCTTGGATCTGCTGCTCCCGTCCTGTACGCTCCCT +
Preference number: 1 (lower is better)
Translates to: GIPAWRRSDGRAFIG*TAALDLLLPSCTLP
Trigger: AGGGAGCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 90 bp ATCTGCTGCTCCCGTCCTGTACGCTCCCTGCTGCTCTTGGCTCAGTaGGCAAGGAAGGAGCCACGGGGGAGGTCTCACGCCCAGATAGTG +
Preference number: 1 (lower is better)
Translates to: ICCSRPVRSLLLLAQ*ARKEPRGRSHAQIV
Trigger: CACTATCTGGGCGTGAGACCTCCCCCGTGGCTCCTTCCTTGCCCACTGAGCCAAGAGCAGCAGGGAGCGTACAGGACGGGAGCAGCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 90 bp AGACGGAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTaGCTGCACCGCGGCCTTGGATCTGCTGCTCCCGTCCTGTACGCT +
Preference number: 1 (lower is better)
Translates to: RRNSSLETERRPCIH*LHRGLGSAAPVLYA
Trigger: AGCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTCCGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 90 bp AAGGAAGGAGCCACGGGGGAGGTCTCACGCCCAGATAGTGGGATCTaGAATGGACCTCAGGTTGGCTCTGGAGCCCGTGCCAAAGACCCT +
Preference number: 1 (lower is better)
Translates to: KEGATGEVSRPDSGI*NGPQVGSGARAKDP
Trigger: AGGGTCTTTGGCACGGGCTCCAGAGCCAACCTGAGGTCCATTCCAGATCCCACTATCTGGGCGTGAGACCTCCCCCGTGGCTCCTTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR GCA 90 bp TTGATTATGAGACGGAATTCCAGCCTGGAGACGGAGCGACGGCCGTaGATTCATTGGCTGCACCGCGGCCTTGGATCTGCTGCTCCCGTC +
Preference number: 1 (lower is better)
Translates to: LIMRRNSSLETERRP*IHWLHRGLGSAAPV
Trigger: GACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTCCGTCTCATAATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR GCA 90 bp CTCTCGACTCTGCACAGCTGCCTTCTGGGCCCTGGTAAAGCTGCCTaGCACCTTGACTTTGCCTCGAGCTCTCCTCTTTCGCGGGACTGT +
Preference number: 1 (lower is better)
Translates to: LSTLHSCLLGPGKAA*HLDFASSSPLSRDC
Trigger: ACAGTCCCGCGAAAGAGGAGAGCTCGAGGCAAAGTCAAGGTGGCAGGCAGCTTTACCAGGGCCCAGAAGGCAGCTGTGCAGAGTCGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR CCA 90 bp GAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTaGCGCGACCTCGGCTCACGGCACCTACAGTCTCCCGAGTTCAAG +
Preference number: 1 (lower is better)
Translates to: ERNCLGESFSQAGVQ*RDLGSRHLQSPEFK
Trigger: CTTGAACTCGGGAGACTGTAGGTGCCGTGAGCCGAGGTCGCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
3UTR TCA 90 bp CGGCGGCTGCTCCATGCCAGTGGCTCCCAGGAGGATATGAAGAGGTaGTGCTGGTGTCCTGACGATGACTTTTGCATCCCACTCACTAGC +
Preference number: 1 (lower is better)
Translates to: RRLLHASGSQEDMKR*CWCPDDDFCIPLTS
Trigger: GCTAGTGAGTGGGATGCAAAAGTCATCGTCAGGACACCAGCATCACCTCTTCATATCCTCCTGGGAGCCACTGGCATGGAGCAGCCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR TCA 90 bp GTTCCCATCGGCGGCTGCTCCATGCCAGTGGCTCCCAGGAGGATATaGAGAGGTGATGCTGGTGTCCTGACGATGACTTTTGCATCCCAC +
Preference number: 1 (lower is better)
Translates to: VPIGGCSMPVAPRRI*RGDAGVLTMTFASH
Trigger: GTGGGATGCAAAAGTCATCGTCAGGACACCAGCATCACCTCTTCATATCCTCCTGGGAGCCACTGGCATGGAGCAGCCGCCGATGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR GCA 90 bp GGTCTGAAACATGACCCCGACTCTCTCCCCACACTTGAAGCGGGCTaGCTGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCC +
Preference number: 1 (lower is better)
Translates to: GLKHDPDSLPTLEAG*LESHKYCGSACITA
Trigger: GGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCAGGCAGCCCGCTTCAAGTGTGGGGAGAGAGTCGGGGTCATGTTTCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR GCA 90 bp TTGTCAGGACAGGGAAGGAGCCCAGCTCTGTTTCTTCCAGTCCTCTaGTCCCAGTTACCCATGTTCCAAACCGCTGCTTCTGGTCCTTCG +
Preference number: 1 (lower is better)
Translates to: LSGQGRSPALFLPVL*SQLPMFQTAASGPS
Trigger: CGAAGGACCAGAAGCAGCGGTTTGGAACATGGGTAACTGGGAGCAGAGGACTGGAAGAAACAGAGCTGGGCTCCTTCCCTGTCCTGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 90 bp TGTATCAAAAGAGCATCCAGCTCTCGACTCTGCACAGCTGCCTTCTaGGCCCTGGTAAAGCTGCCTGCCACCTTGACTTTGCCTCGAGCT +
Preference number: 1 (lower is better)
Translates to: CIKRASSSRLCTAAF*ALVKLPATLTLPRA
Trigger: AGCTCGAGGCAAAGTCAAGGTGGCAGGCAGCTTTACCAGGGCCCAGAAGGCAGCTGTGCAGAGTCGAGAGCTGGATGCTCTTTTGATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR TCA 90 bp GAAAACACAACAGCTCATCTTTCCTCAACTACTGAAATGAGCCAGTaGGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCAC +
Preference number: 1 (lower is better)
Translates to: ENTTAHLSSTTEMSQ*DHTGQDARSPSLGH
Trigger: GTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATTTCAGTAGTTGAGGAAAGATGAGCTGTTGTGTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR GCA 90 bp GGCAACAGAGCTGGCAAACAGGGCTCTGTTGACTCACTGCTAGTCTaGAACCTGTCCAGTAGGAGCTCCTTAAACATGCCTGGACAAGGG +
Preference number: 1 (lower is better)
Translates to: GNRAGKQGSVDSLLV*NLSSRSSLNMPGQG
Trigger: CCCTTGTCCAGGCATGTTTAAGGAGCTCCTACTGGACAGGTTGCAGACTAGCAGTGAGTCAACAGAGCCCTGTTTGCCAGCTCTGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 90 bp GACAGTTCCGGTAGATGTGACGTAGGAGCCCAGAGTACAATGAGGTaGCCCTCAAAGAAGGCTGGCTGGGGATTTTTGAGATCCCACTGC +
Preference number: 1 (lower is better)
Translates to: DSSGRCDVGAQSTMR*PSKKAGWGFLRSHC
Trigger: GCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTCTTTGAGGGCCACCTCATTGTACTCTGGGCTCCTACGTCACATCTACCGGAACTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR TCA 90 bp GTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGAGACTaGGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAG +
Preference number: 1 (lower is better)
Translates to: VTEDRLLLPPVDGRD*GGGWMSFRSISRRK
Trigger: CTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR CCA 90 bp CTTGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTaGATGGCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCA +
Preference number: 1 (lower is better)
Translates to: LGILVLLKIGCCFLL*MAETEEVAGCRSGP
Trigger: TGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR TCA 90 bp TTGGCCAACATTCCAGGACGTGCCACTCACTCTTCTCTAATAGACTaGCTTGGAAATGTCCCTAGAACTCTGACGGTTCCCATCGGCGGC +
Preference number: 1 (lower is better)
Translates to: LANIPGRATHSSLID*LGNVPRTLTVPIGG
Trigger: GCCGCCGATGGGAACCGTCAGAGTTCTAGGGACATTTCCAAGTCAGTCTATTAGAGAAGAGTGAGTGGCACGTCCTGGAATGTTGGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR CCA 90 bp AGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATaGCCTTGGAAGCCTCCGTGGATGACCAAGTGTGTATTTCACTCG +
Preference number: 1 (lower is better)
Translates to: RAGTEAWLSSNCIWP*PWKPPWMTKCVFHS
Trigger: CGAGTGAAATACACACTTGGTCATCCACGGAGGCTTCCAAGGCCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR TCA 90 bp GTCAGGCAGCTATTTTTACTGGCCCAGACCAGCCCAAGGAGATGCTaGGGCCTCTCACCAAGAATTCAAATCCAATTCAGCACCAGAGAG +
Preference number: 1 (lower is better)
Translates to: VRQLFLLAQTSPRRC*GLSPRIQIQFSTRE
Trigger: CTCTCTGGTGCTGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCTGGGCCAGTAAAAATAGCTGCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR CCA 90 bp TTCAGCACCAGAGAGGGGCTTGTGAAGACACACAATCAACAAACATaGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGA +
Preference number: 1 (lower is better)
Translates to: FSTREGLVKTHNQQT*NLRAHCTRWPAQRG
Trigger: TCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTGATTGTGTGTCTTCACAAGCCCCTCTCTGGTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR TCA 90 bp GCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTaGGGTTCTATACTCAGCAGTAAAAGTAGAGGACCCTCCTTCACC +
Preference number: 1 (lower is better)
Translates to: AGCRSGPFPGEREHS*GSILSSKSRGPSFT
Trigger: GGTGAAGGAGGGTCCTCTACTTTTACTGCTGAGTATAGAACCTCAGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR TCA 90 bp AAAGATAAGAAAACACAACAGCTCATCTTTCCTCAACTACTGAAATaGGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCC +
Preference number: 1 (lower is better)
Translates to: KDKKTQQLIFPQLLK*ASETTQDRTPGPPP
Trigger: GGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATTTCAGTAGTTGAGGAAAGATGAGCTGTTGTGTTTTCTTATCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR GCA 90 bp GGGCTGCCTGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTaGCCAAGCCGTTGTACTCAATTTTGTTACCTAACACCATTTCAG +
Preference number: 1 (lower is better)
Translates to: GLPGKPQILWVSLYH*PSRCTQFCYLTPFQ
Trigger: CTGAAATGGTGTTAGGTAACAAAATTGAGTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCAGGCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR TCA 90 bp TCTCTTCTAACTGTATTTGGCCATGGCCTTGGAAGCCTCCGTGGATaGCCAAGTGTGTATTTCACTCGTCTCAATGCTATGTCTGAGGCA +
Preference number: 1 (lower is better)
Translates to: SLLTVFGHGLGSLRG*PSVYFTRLNAMSEA
Trigger: TGCCTCAGACATAGCATTGAGACGAGTGAAATACACACTTGGTCATCCACGGAGGCTTCCAAGGCCATGGCCAAATACAGTTAGAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR GCA 90 bp CTTGTGAAGACACACAATCAACAAACATGGAATCTGAGAGCACACTaGACTAGATGGCCAGCTCAACGGGGACCCCCTTTCATCATCAAA +
Preference number: 1 (lower is better)
Translates to: LVKTHNQQTWNLRAH*TRWPAQRGPPFIIK
Trigger: TTTGATGATGAAAGGGGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTGATTGTGTGTCTTCACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR GCA 90 bp GTGGCAAGGAGCCCTTTTCTGACACGAATCCAGGAAAGGATACTCTaGACTTCTGGCCAATTATTTAAACTTTGGATACAGCCACCCACA +
Preference number: 1 (lower is better)
Translates to: VARSPFLTRIQERIL*TSGQLFKLWIQPPT
Trigger: TGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTCGTGTCAGAAAAGGGCTCCTTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR CCA 90 bp AACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTaGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTG +
Preference number: 1 (lower is better)
Translates to: NKAELSYGRANPVCP*NPSVTEDRLLLPPV
Trigger: CACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR TCA 90 bp AAACATAGGTCGTGTCTATACAGTCTGGGCAAAGTGGATGTAGAATaGCAGAATCTGGTTAGCATCATTCAGAGCTGGTACGGAAGCCTG +
Preference number: 1 (lower is better)
Translates to: KHRSCLYSLGKVDVE*QNLVSIIQSWYGSL
Trigger: CAGGCTTCCGTACCAGCTCTGAATGATGCTAACCAGATTCTGTCATTCTACATCCACTTTGCCCAGACTGTATAGACACGACCTATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR TCA 90 bp TTGACTTTGCCTCGAGCTCTCCTCTTTCGCGGGACTGTAAAATCCTaGAATTCTAGAACTCGCTTCCTCTTCTGTTGGCTGATTGAGATT +
Preference number: 1 (lower is better)
Translates to: LTLPRALLFRGTVKS*NSRTRFLFCWLIEI
Trigger: AATCTCAATCAGCCAACAGAAGAGGAAGCGAGTTCTAGAATTTCAGGATTTTACAGTCCCGCGAAAGAGGAGAGCTCGAGGCAAAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR TCA 90 bp CCAGCTCAGTGGTTAGTATCTTTATTTGGAGACGAGGGCAACCCATaGGAGATCTTAAGGAGTGGTTCTGACAAGTGCAAACTTGTGTTT +
Preference number: 1 (lower is better)
Translates to: PAQWLVSLFGDEGNP*EILRSGSDKCKLVF
Trigger: AAACACAAGTTTGCACTTGTCAGAACCACTCCTTAAGATCTCTCATGGGTTGCCCTCGTCTCCAAATAAAGATACTAACCACTGAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
3UTR CCA 90 bp GAATCGCTTCTCAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTaGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAAGAG +
Preference number: 1 (lower is better)
Translates to: ESLLNSLMIVPAPLP*QRRSPVPLVSVSKE
Trigger: CTCTTTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTGAGAAGCGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR CCA 90 bp ATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTaGATACAGCCACCCACAATGTGGTTATTTAAGAAGTCCTTTCCA +
Preference number: 1 (lower is better)
Translates to: IQERILCTSGQLFKL*IQPPTMWLFKKSFP
Trigger: TGGAAAGGACTTCTTAAATAACCACATTGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR CAA 90 bp CGGCCTTGGATCTGCTGCTCCCGTCCTGTACGCTCCCTGCTGCTCTaGGCTCAGTGGGCAAGGAAGGAGCCACGGGGGAGGTCTCACGCC +
Preference number: 2 (lower is better)
Translates to: RPWICCSRPVRSLLL*AQWARKEPRGRSHA
Trigger: GGCGTGAGACCTCCCCCGTGGCTCCTTCCTTGCCCACTGAGCCAAGAGCAGCAGGGAGCGTACAGGACGGGAGCAGCAGATCCAAGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CAA 90 bp TGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGCCTaGGATCTGCTGCTCCCGTCCTGTACGCTCCCTGCTGCTCTTGGC +
Preference number: 2 (lower is better)
Translates to: WRRSDGRAFIGCTAA*DLLLPSCTLPAALG
Trigger: GCCAAGAGCAGCAGGGAGCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CAA 90 bp GAGACGGAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATaGGCTGCACCGCGGCCTTGGATCTGCTGCTCCCGTCCTGTACGC +
Preference number: 2 (lower is better)
Translates to: ETEFQPGDGATAVHS*AAPRPWICCSRPVR
Trigger: GCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTCCGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR GCA 90 bp CAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCCCGCGGCCTTGGATCTaGTGCTCCCGTCCTGTACGC +
Preference number: 2 (lower is better)
Translates to: QTWNLRAHCTRWPAQRGPPRPWI*CSRPVR
Trigger: GCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGG...GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR TCA 90 bp GCAGGGCTGGCCTCACAACAACTCCTCTCCTACATTGTCAGGACAGGGAAGGAGCTCTCTCCCCACACTTaGAGCGGGCTGCCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: AGLASQQLLSYIVRTGKELSPHT*SGLPGK
Trigger: CTTTCCAGGCAGCCCGCTTCAAGTGTGGGGAGAGAG...CTCCTTCCCTGTCCTGACAATGTAGGAGAGGAGTTGTTGTGAGGCCAGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR GCA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCACTGAAGATAGGCTGCTaGTTCCTCCTGTGGATGGCA +
Preference number: 2 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPLKIGC*FLLWMA
Trigger: TGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAG...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR-3UTR TCA 90 bp CACTGCAGGAACACATCTCTGGGTCTGAAACATGACCCCGACTCTCTCCCCACAGTGGATGGCAGAGACTaGGGAGGTGGCTGGATGTCG +
Preference number: 2 (lower is better)
Translates to: HCRNTSLGLKHDPDSLPTVDGRD*GGGWMS
Trigger: CGACATCCAGCCACCTCCTCAGTCTCTGCCATCCAC...TGTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGTTCCTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR TCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTAGTGGATGGCAGAGACTaGGGAGGTGGCTGGATGTCG +
Preference number: 2 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLVDGRD*GGGWMS
Trigger: CGACATCCAGCCACCTCCTCAGTCTCTGCCATCCAC...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR-3UTR GCA 90 bp CAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGTCCAGCTCTCGACTCTaGACAGCTGCCTTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: QRLRRWLDVVQVHFQEKGSSSRL*TAAFWA
Trigger: GGCCCAGAAGGCAGCTGTGCAGAGTCGAGAGCTGGA...CCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR-3UTR CCA 90 bp GCAGGGCTGGCCTCACAACAACTCCTCTCCTACATTGTCAGGACAGGGAAGGAGCCAAACCGCTGCTTCTaGTCCTTCGAGTGCCACACC +
Preference number: 2 (lower is better)
Translates to: AGLASQQLLSYIVRTGKEPNRCF*SFECHT
Trigger: GGTGTGGCACTCGAAGGACCAGAAGCAGCGGTTTGG...CTCCTTCCCTGTCCTGACAATGTAGGAGAGGAGTTGTTGTGAGGCCAGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR CCA 90 bp CAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCACCTCAGGTTGGCTCTaGAGCCCGTGCCAAAGACCC +
Preference number: 2 (lower is better)
Translates to: QTWNLRAHCTRWPAQRGPTSGWL*SPCQRP
Trigger: GGGTCTTTGGCACGGGCTCCAGAGCCAACCTGAGGT...GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CAA 90 bp GGGAGGTCTCACGCCCAGATAGTGGGATCTGGAATGGACCTCAGGTaGGCTCTGGAGCCCGTGCCAAAGACCCTTTCAGGCAAAATTGTG +
Preference number: 2 (lower is better)
Translates to: GRSHAQIVGSGMDLR*ALEPVPKTLSGKIV
Trigger: CACAATTTTGCCTGAAAGGGTCTTTGGCACGGGCTCCAGAGCCAACCTGAGGTCCATTCCAGATCCCACTATCTGGGCGTGAGACCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CAA 90 bp GGAAGGACAGGAGGGGCGCTGGGACTCATGAGTAGCTGCTATACTTaGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACC +
Preference number: 2 (lower is better)
Translates to: GRTGGALGLMSSCYT*GSVPHPCVCSVSAT
Trigger: GGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCATGAGTCCCAGCGCCCCTCCTGTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
3UTR-3UTR TCA 90 bp TTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACCAGGCCTGTCTCAAGTaGTCCGCCCGCCTCTGCCTC +
Preference number: 2 (lower is better)
Translates to: FGICPPSLCLQCFSDHFNQACLK*SARLCL
Trigger: GAGGCAGAGGCGGGCGGATCACTTGAGACAGGCCTG...GTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
3UTR-3UTR CCA 90 bp GCAGGGCTGGCCTCACAACAACTCCTCTCCTACATTGTCAGGACAGGGAAGGAGGCTGCTCCATGCCAGTaGCTCCCAGGAGGATATGAA +
Preference number: 2 (lower is better)
Translates to: AGLASQQLLSYIVRTGKEAAPCQ*LPGGYE
Trigger: TTCATATCCTCCTGGGAGCCACTGGCATGGAGCAGC...CTCCTTCCCTGTCCTGACAATGTAGGAGAGGAGTTGTTGTGAGGCCAGCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR TCA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGGCTCCCAGGAGGATATaGAGAGGTGATGCTGGTGTC +
Preference number: 2 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLAPRRI*RGDAGV
Trigger: GACACCAGCATCACCTCTTCATATCCTCCTGGGAGC...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR GCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTACCTGGTAAAGCTGCCTaGCACCTTGACTTTGCCTCG +
Preference number: 2 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLPGKAA*HLDFAS
Trigger: CGAGGCAAAGTCAAGGTGGCAGGCAGCTTTACCAGG...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR-3UTR CCA 90 bp CAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGTGCTGCTTCCTCCTGTaGATGGCAGAGACTGAGGAG +
Preference number: 2 (lower is better)
Translates to: QRLRRWLDVVQVHFQEKGCCFLL*MAETEE
Trigger: CTCCTCAGTCTCTGCCATCCACAGGAGGAAGCAGCA...CCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR-3UTR CCA 90 bp CTCAGGCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTGTAGCTCTGGGCAGGTaGTGTGCCAGCAGCCGATTA +
Preference number: 2 (lower is better)
Translates to: LRLRIRQTLHVFTVPPSAVALGR*CASSRL
Trigger: TAATCGGCTGCTGGCACACCACCTGCCCAGAGCTAC...AGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR CCA 90 bp AGAAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGAGCTTCCCGAGTAGCTaGGATTACAGGCGCGCGCCA +
Preference number: 2 (lower is better)
Translates to: RKERNCLGESFSQAGVQWSFPSS*DYRRAP
Trigger: TGGCGCGCGCCTGTAATCCCAGCTACTCGGGAAGCT...CCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330495.8
3UTR-3UTR TCA 90 bp CACTGCAGGAACACATCTCTGGGTCTGAAACATGACCCCGACTCTCTCCCCACAACTGAAATGAGCCAGTaGGACCACACAGGACAGGAC +
Preference number: 2 (lower is better)
Translates to: HCRNTSLGLKHDPDSLPTTEMSQ*DHTGQD
Trigger: GTCCTGTCCTGTGTGGTCTCACTGGCTCATTTCAGT...TGTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGTTCCTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR TCA 90 bp GCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGCTGTCTGGGTCTGAAACATaGCCCCGACTCTCTCCCCAC +
Preference number: 2 (lower is better)
Translates to: AGYGHTGLQWKRNKTSRLSGSET*PRLSPH
Trigger: GTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGA...CAGCCTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR TCA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGCTGGCTGGGGATTTTTaGGATCCCACTGCAGGAACA +
Preference number: 2 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLLAGDF*DPTAGT
Trigger: TGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAG...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR TCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGTCTTCTCTAATAGACTaGCTTGGAAATGTCCCTAGA +
Preference number: 2 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRSSLID*LGNVPR
Trigger: TCTAGGGACATTTCCAAGTCAGTCTATTAGAGAAGA...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGAGCTTCCTCCTGTGGATaGCAGAGACTGAGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRASSCG*QRLRRW
Trigger: CCACCTCCTCAGTCTCTGCCATCCACAGGAGGAAGC...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp GCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACTCAATTACTTCGAATGGGGCCTaGACGGGCTCCTCTGGCACT +
Preference number: 2 (lower is better)
Translates to: ATNTVGQPVSLPKPLYSITSNGA*TGSSGT
Trigger: AGTGCCAGAGGAGCCCGTCCAGGCCCCATTCGAAGT...AATTGAGTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp CCTCTGCCCACAGACTCCTGCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCAGTTACACTAGAAGCTaGAGATGGGGAAGGGATTGC +
Preference number: 2 (lower is better)
Translates to: PLPTDSCRHKPRNSANSSSYTRS*RWGRDC
Trigger: GCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACT...GCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGCAGGAGTCTGTGGGCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp CAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCGTGGCTGAGCGCAGCTaGAGCCTAGGTATATACATC +
Preference number: 2 (lower is better)
Translates to: QTWNLRAHCTRWPAQRGPVAERS*SLGIYI
Trigger: GATGTATATACCTAGGCTCCAGCTGCGCTCAGCCAC...GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR TCA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGGAGGATATGAAGAGGTaGTGCTGGTGTCCTGACGAT +
Preference number: 2 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLEDMKR*CWCPDD
Trigger: ATCGTCAGGACACCAGCATCACCTCTTCATATCCTC...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR GCA 90 bp GCAGGGCTGGCCTCACAACAACTCCTCTCCTACATTGTCAGGACAGGGAAGGAGTTACTGAAGATAGGCTaGTGCTTCCTCCTGTGGATG +
Preference number: 2 (lower is better)
Translates to: AGLASQQLLSYIVRTGKELLKIG*CFLLWM
Trigger: CATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAA...CTCCTTCCCTGTCCTGACAATGTAGGAGAGGAGTTGTTGTGAGGCCAGCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR GCA 90 bp CAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCGTCAGCCTGTATCACTaGCCAAGCCGTTGTACTCAA +
Preference number: 2 (lower is better)
Translates to: QTWNLRAHCTRWPAQRGPVSLYH*PSRCTQ
Trigger: TTGAGTACAACGGCTTGGGCAGTGATACAGGCTGAC...GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR GCA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGACACTTGAAGCGGGCTaGCTGGAAAGCCACAAATAC +
Preference number: 2 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLTLEAG*LESHKY
Trigger: GTATTTGTGGCTTTCCAGGCAGCCCGCTTCAAGTGT...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp CAACAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACAGAGACTGAGGAGGTaGCTGGATGTCGTTCAGGTC +
Preference number: 2 (lower is better)
Translates to: QQTWNLRAHCTRWPAQRGQRLRR*LDVVQV
Trigger: GACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG...TCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp GCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTACTGTTGCTGCTTCCTCCTGTaGATGGCAGAGACTGAGGAG +
Preference number: 2 (lower is better)
Translates to: APNKANATCLHRTSLSYCCCFLL*MAETEE
Trigger: CTCCTCAGTCTCTGCCATCCACAGGAGGAAGCAGCA...ACAGTAGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR CCA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGGCCCTCAAAGAAGGCTaGCTGGGGATTTTTGAGATC +
Preference number: 2 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLALKEG*LGIFEI
Trigger: GATCTCAAAAATCCCCAGCCAGCCTTCTTTGAGGGC...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp ACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCCCTCCTTGGAAGCCTCCGTaGATGACCAAGTGTGTATTT +
Preference number: 2 (lower is better)
Translates to: TWNLRAHCTRWPAQRGPPPWKPP*MTKCVF
Trigger: AAATACACACTTGGTCATCCACGGAGGCTTCCAAGG...AGGGGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp CAACAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGAATTTGGCCATGGCCTTaGAAGCCTCCGTGGATGACC +
Preference number: 2 (lower is better)
Translates to: QQTWNLRAHCTRWPAQRGIWPWP*KPPWMT
Trigger: GGTCATCCACGGAGGCTTCCAAGGCCATGGCCAAAT...TCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR TCA 90 bp CAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGGAAAGGGAGCATTCCTaGGGTTCTATACTCAGCAGT +
Preference number: 2 (lower is better)
Translates to: QRLRRWLDVVQVHFQEKGEREHS*GSILSS
Trigger: ACTGCTGAGTATAGAACCTCAGGAATGCTCCCTTTC...CCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR-3UTR TCA 90 bp CAACAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGAACACATCTCTGGGTCTaGAACATGACCCCGACTCTC +
Preference number: 2 (lower is better)
Translates to: QQTWNLRAHCTRWPAQRGTHLWV*NMTPTL
Trigger: GAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGT...TCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR GCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTACCTGATGATTGTTCCTaGTCCTCTTCCTTGGCAAAG +
Preference number: 2 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLPDDCS*SSSLAK
Trigger: CTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGG...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR-3UTR GCA 90 bp ATCCAATTCAGCACCAGAGAGGGGCTTGTGAAGACACACAATCAACAAACATGGCGTGCATTCATTGGCTaGACCGCGGCCTTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: IQFSTREGLVKTHNQQTWRAFIG*TAALEA
Trigger: GGCTTCCAAGGCCGCGGTGCAGCCAATGAATGCACG...CCATGTTTGTTGATTGTGTGTCTTCACAAGCCCCTCTCTGGTGCTGAATTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432485.1
3UTR-3UTR CCA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGAGTTACACTAGAAGCTaGAGATGGGGAAGGGATTGC +
Preference number: 2 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLSYTRS*RWGRDC
Trigger: GCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACT...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp GCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTACTGTAACTGTATTTGGCCATaGCCTTGGAAGCCTCCGTGG +
Preference number: 2 (lower is better)
Translates to: APNKANATCLHRTSLSYCNCIWP*PWKPPW
Trigger: CCACGGAGGCTTCCAAGGCCATGGCCAAATACAGTT...ACAGTAGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR TCA 90 bp GGGAGCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGCCTCAACTACTGAAATaGGCCAGTGAGACCACACAG +
Preference number: 2 (lower is better)
Translates to: GSRIWTHRTSVEKEQDLEPQLLK*ASETTQ
Trigger: CTGTGTGGTCTCACTGGCTCATTTCAGTAGTTGAGG...CTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR TCA 90 bp CACTGCAGGAACACATCTCTGGGTCTGAAACATGACCCCGACTCTCTCCCCACATCTTTCCTCAACTACTaGAATGAGCCAGTGAGACCA +
Preference number: 2 (lower is better)
Translates to: HCRNTSLGLKHDPDSLPTSFLNY*NEPVRP
Trigger: TGGTCTCACTGGCTCATTTCAGTAGTTGAGGAAAGA...TGTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGTTCCTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR TCA 90 bp GGGAGAGGTATTGAGGTGAAACATAGGTCGTGTCTATACAGTCTGGGCAAAGTGGAGCCCAGAGTACAATaGGGTGGCCCTCAAAGAAGG +
Preference number: 2 (lower is better)
Translates to: GRGIEVKHRSCLYSLGKVEPRVQ*GGPQRR
Trigger: CCTTCTTTGAGGGCCACCTCATTGTACTCTGGGCTC...CACTTTGCCCAGACTGTATAGACACGACCTATGTTTCACCTCAATACCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR TCA 90 bp GGGAGAGGTATTGAGGTGAAACATAGGTCGTGTCTATACAGTCTGGGCAAAGTGGCTCCCAGGAGGATATaGAGAGGTGATGCTGGTGTC +
Preference number: 2 (lower is better)
Translates to: GRGIEVKHRSCLYSLGKVAPRRI*RGDAGV
Trigger: GACACCAGCATCACCTCTTCATATCCTCCTGGGAGC...CACTTTGCCCAGACTGTATAGACACGACCTATGTTTCACCTCAATACCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR TCA 90 bp ATCCAATTCAGCACCAGAGAGGGGCTTGTGAAGACACACAATCAACAAACATGGATGTCCCTAGAACTCTaGCGGTTCCCATCGGCGGCT +
Preference number: 2 (lower is better)
Translates to: IQFSTREGLVKTHNQQTWMSLEL*RFPSAA
Trigger: AGCCGCCGATGGGAACCGTCAGAGTTCTAGGGACAT...CCATGTTTGTTGATTGTGTGTCTTCACAAGCCCCTCTCTGGTGCTGAATTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR GCA 90 bp GCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGCTGACACTTGAAGCGGGCTaGCTGGAAAGCCACAAATAC +
Preference number: 2 (lower is better)
Translates to: AGYGHTGLQWKRNKTSRLTLEAG*LESHKY
Trigger: GTATTTGTGGCTTTCCAGGCAGCCCGCTTCAAGTGT...CAGCCTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGAGCGGAACTTTCATATaGACGTGCAAATCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLSGTFI*TCKSCV
Trigger: CACACAGGATTTGCACGTCCATATGAAAGTTCCGCT...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp GCTTTAACAGGAGATGAGGTACAGCTGAACTCATGGAGACATGAAGCTGGAAAGTACCATGTCCCATCGTaGTTAGGGACCACGGGCCTG +
Preference number: 2 (lower is better)
Translates to: ALTGDEVQLNSWRHEAGKYHVPS*LGTTGL
Trigger: CAGGCCCGTGGTCCCTAACCACGATGGGACATGGTA...CTTTCCAGCTTCATGTCTCCATGAGTTCAGCTGTACCTCATCTCCTGTTAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CAA 90 bp CACTGCCTAAAAGTTGGTCTTTCGCAGATCTTAATGTACATGGCATaGATTATGAGACGGAATTCCAGCCTGGAGACGGAGCGACGGCCG +
Preference number: 2 (lower is better)
Translates to: HCLKVGLSQILMYMA*IMRRNSSLETERRP
Trigger: CGGCCGTCGCTCCGTCTCCAGGCTGGAATTCCGTCTCATAATCAATGCCATGTACATTAAGATCTGCGAAAGACCAACTTTTAGGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR TCA 90 bp GAAGCGGGCTGCCTGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCATAGTAGTTTTTCAATaGTCGGGAGAGAAACCTGCT +
Preference number: 2 (lower is better)
Translates to: EAGCLESHKYCGSACITAIVVFQ*SGEKPA
Trigger: AGCAGGTTTCTCTCCCGATCATTGAAAAACTACTAT...GGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCAGGCAGCCCGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR TCA 90 bp CTCAGGCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTGGAGAGGTATTGAGGTaGAACATAGGTCGTGTCTAT +
Preference number: 2 (lower is better)
Translates to: LRLRIRQTLHVFTVPPSAGEVLR*NIGRVY
Trigger: ATAGACACGACCTATGTTTCACCTCAATACCTCTCC...AGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR TCA 90 bp TGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAAGCTGCCTGCCACCTTaGCTTTGCCTCGAGCTCTCC +
Preference number: 2 (lower is better)
Translates to: CSSSLAKKVSSSISFCIKSCLPP*LCLELS
Trigger: GGAGAGCTCGAGGCAAAGTCAAGGTGGCAGGCAGCT...TTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR-3UTR GCA 90 bp CACTGCAGGAACACATCTCTGGGTCTGAAACATGACCCCGACTCTCTCCCCACAAAAATGTCTCTTCCATaGAGCGATCAACTGGGTCAA +
Preference number: 2 (lower is better)
Translates to: HCRNTSLGLKHDPDSLPTKMSLP*SDQLGQ
Trigger: TTGACCCAGTTGATCGCTGCATGGAAGAGACATTTT...TGTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGTTCCTGCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp GAAGGCTGGCTGGGGATTTTTGAGATCCCACTGCAGGAACACATCTCTGGGTCTCTGTGCATTTTTGAGTaGTTTGGCGGTAGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: EGWLGIFEIPLQEHISGSLCIFE*FGGRAK
Trigger: TTTTGCCCTACCGCCAAACCACTCAAAAATGCACAG...AGACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGCAGAGACTGAGGAGGTaGCTGGATGTCGTTCAGGTC +
Preference number: 2 (lower is better)
Translates to: TVNKAELSYGRANPVCPWQRLRR*LDVVQV
Trigger: GACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR-3UTR CCA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGATCAAAGAAGGCTGGCTaGGGATTTTTGAGATCCCAC +
Preference number: 2 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRSKKAG*GFLRSH
Trigger: GTGGGATCTCAAAAATCCCCAGCCAGCCTTCTTTGA...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp GCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTACTGTGCTGGTACGGAAGCCTaGCTCTCTTCTAACTGTATT +
Preference number: 2 (lower is better)
Translates to: APNKANATCLHRTSLSYCAGTEA*LSSNCI
Trigger: AATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGC...ACAGTAGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR TCA 90 bp CAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTGAAAGGGAGCATTCCTaGGGTTCTATACTCAGCAGT +
Preference number: 2 (lower is better)
Translates to: QQPDDCSCSSSLAKKVSSEREHS*GSILSS
Trigger: ACTGCTGAGTATAGAACCTCAGGAATGCTCCCTTTC...ACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR-3UTR TCA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGAGAAAGGGAGCATTCCTaGGGTTCTATACTCAGCAGT +
Preference number: 2 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGREREHS*GSILSS
Trigger: ACTGCTGAGTATAGAACCTCAGGAATGCTCCCTTTC...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR-3UTR TCA 90 bp CTCAGGCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTTGTAACAGGCACAGTTaGAACTATCTCTGCCATGTT +
Preference number: 2 (lower is better)
Translates to: LRLRIRQTLHVFTVPPSACNRHS*NYLCHV
Trigger: AACATGGCAGAGATAGTTTCAACTGTGCCTGTTACA...AGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR GCA 90 bp CCTCTGCCCACAGACTCCTGCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATCAACTGGGTCAAATaGCTATCATGTATTCTTAAG +
Preference number: 2 (lower is better)
Translates to: PLPTDSCRHKPRNSANSSINWVK*LSCILK
Trigger: CTTAAGAATACATGATAGGCATTTGACCCAGTTGAT...GCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGCAGGAGTCTGTGGGCAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR GCA 90 bp TGCTGGTGTCCTGACGATGACTTTTGCATCCCACTCACTAGCCATGGAATGTTAGTCAGCCTGTATCACTaGCCAAGCCGTTGTACTCAA +
Preference number: 2 (lower is better)
Translates to: CWCPDDDFCIPLTSHGMLVSLYH*PSRCTQ
Trigger: TTGAGTACAACGGCTTGGGCAGTGATACAGGCTGAC...TAACATTCCATGGCTAGTGAGTGGGATGCAAAAGTCATCGTCAGGACACCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR GCA 90 bp GCTTTAACAGGAGATGAGGTACAGCTGAACTCATGGAGACATGAAGCTGGAAAGGACTCACTGCTAGTCTaGAACCTGTCCAGTAGGAGC +
Preference number: 2 (lower is better)
Translates to: ALTGDEVQLNSWRHEAGKDSLLV*NLSSRS
Trigger: GCTCCTACTGGACAGGTTGCAGACTAGCAGTGAGTC...CTTTCCAGCTTCATGTCTCCATGAGTTCAGCTGTACCTCATCTCCTGTTAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR CCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGAATCCTGTGTGTCCTTaGAATCCTAGTGTTACTGAA +
Preference number: 2 (lower is better)
Translates to: AETEEVAGCRSGPFPGERNPVCP*NPSVTE
Trigger: TTCAGTAACACTAGGATTCCAAGGACACACAGGATT...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR-3UTR CCA 90 bp GTCACAAACTACCAAACAGAAAAGGAACTGCAGGGGCATCATGTATACCAATGTAACGACGGGCAGGGCTaGCCTCACAACAACTCCTCT +
Preference number: 2 (lower is better)
Translates to: VTNYQTEKELQGHHVYQCNDGQG*PHNNSS
Trigger: AGAGGAGTTGTTGTGAGGCCAGCCCTGCCCGTCGTT...ACATTGGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTTGGTAGTTTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR TCA 90 bp CTCAGGCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTATAGTAGTTTTTCAATaGTCGGGAGAGAAACCTGCT +
Preference number: 2 (lower is better)
Translates to: LRLRIRQTLHVFTVPPSAIVVFQ*SGEKPA
Trigger: AGCAGGTTTCTCTCCCGATCATTGAAAAACTACTAT...AGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGCCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR GCA 90 bp CACTGCAGGAACACATCTCTGGGTCTGAAACATGACCCCGACTCTCTCCCCACAAAAATTCATGGACTGTaGATTTTTGAGTGGTTTGGC +
Preference number: 2 (lower is better)
Translates to: HCRNTSLGLKHDPDSLPTKIHGL*IFEWFG
Trigger: GCCAAACCACTCAAAAATGCACAGTCCATGAATTTT...TGTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGTTCCTGCAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR GCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTACTGAAGATAGGCTGCTaGTTCCTCCTGTGGATGGCA +
Preference number: 2 (lower is better)
Translates to: TKRNFHMDVQILCVLGILLKIGC*FLLWMA
Trigger: TGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAG...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR-3UTR GCA 90 bp TGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACACTTTCATATGGACGTaGAAATCCTGTGTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: WKATNTVGQPVSLPKPLYTFIWT*KSCVSL
Trigger: CAAGGACACACAGGATTTGCACGTCCATATGAAAGT...GTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR GCA 90 bp TGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAATCGACTCTGCACAGCTaGCTTCTGGGCCCTGGTAAA +
Preference number: 2 (lower is better)
Translates to: CSSSLAKKVSSSISFCIKSTLHS*LLGPGK
Trigger: TTTACCAGGGCCCAGAAGGCAGCTGTGCAGAGTCGA...TTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR-3UTR CCA 90 bp CAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTCTGTGCATTTTTGAGTaGTTTGGCGGTAGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: QQPDDCSCSSSLAKKVSSLCIFE*FGGRAK
Trigger: TTTTGCCCTACCGCCAAACCACTCAAAAATGCACAG...ACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR-3UTR CCA 90 bp TCTTCCATGCAGCGATCAACTGGGTCAAATGCCTATCATGTATTCTTAAGACATGCAACTTACTTCGAATaGGGCCTGGACGGGCTCCTC +
Preference number: 2 (lower is better)
Translates to: SSMQRSTGSNAYHVFLRHATYFE*GLDGLL
Trigger: GAGGAGCCCGTCCAGGCCCCATTCGAAGTAAGTTGC...ATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR TCA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGACTGAAATGAGCCAGTaGGACCACACAGGACAGGAC +
Preference number: 2 (lower is better)
Translates to: FHMDVQILCVLGILVLLKTEMSQ*DHTGQD
Trigger: GTCCTGTCCTGTGTGGTCTCACTGGCTCATTTCAGT...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR-3UTR GCA 90 bp GGGAGAGGTATTGAGGTGAAACATAGGTCGTGTCTATACAGTCTGGGCAAAGTGCAACATTCCAGGACGTaGCACTCACTCTTCTCTAAT +
Preference number: 2 (lower is better)
Translates to: GRGIEVKHRSCLYSLGKVQHSRT*HSLFSN
Trigger: ATTAGAGAAGAGTGAGTGGCACGTCCTGGAATGTTG...CACTTTGCCCAGACTGTATAGACACGACCTATGTTTCACCTCAATACCTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR GCA 90 bp CAACAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGAGGAGAAAAGTATCACTaGCTAAAAGTTGGTCTTTCG +
Preference number: 2 (lower is better)
Translates to: QQTWNLRAHCTRWPAQRGGEKYH*LKVGLS
Trigger: CGAAAGACCAACTTTTAGGCAGTGATACTTTTCTCC...TCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp TCTTCCATGCAGCGATCAACTGGGTCAAATGCCTATCATGTATTCTTAAGACATTGCTGCTTCCTCCTGTaGATGGCAGAGACTGAGGAG +
Preference number: 2 (lower is better)
Translates to: SSMQRSTGSNAYHVFLRHCCFLL*MAETEE
Trigger: CTCCTCAGTCTCTGCCATCCACAGGAGGAAGCAGCA...ATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp TGCTGGTGTCCTGACGATGACTTTTGCATCCCACTCACTAGCCATGGAATGTTACATGCAGCGATCAACTaGGTCAAATGCCTATCATGT +
Preference number: 2 (lower is better)
Translates to: CWCPDDDFCIPLTSHGMLHAAIN*VKCLSC
Trigger: ACATGATAGGCATTTGACCCAGTTGATCGCTGCATG...TAACATTCCATGGCTAGTGAGTGGGATGCAAAAGTCATCGTCAGGACACCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR TCA 90 bp TCTTCCATGCAGCGATCAACTGGGTCAAATGCCTATCATGTATTCTTAAGACATACTGAAATGAGCCAGTaGGACCACACAGGACAGGAC +
Preference number: 2 (lower is better)
Translates to: SSMQRSTGSNAYHVFLRHTEMSQ*DHTGQD
Trigger: GTCCTGTCCTGTGTGGTCTCACTGGCTCATTTCAGT...ATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR GCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTATTACTGAAGATAGGCTaGTGCTTCCTCCTGTGGATG +
Preference number: 2 (lower is better)
Translates to: TKRNFHMDVQILCVLGILLLKIG*CFLLWM
Trigger: CATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAA...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR-3UTR GCA 90 bp ATCCAATTCAGCACCAGAGAGGGGCTTGTGAAGACACACAATCAACAAACATGGTTTTTGAGATCCCACTaGAGGAACACATCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: IQFSTREGLVKTHNQQTWFLRSH*RNTSLG
Trigger: ACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAA...CCATGTTTGTTGATTGTGTGTCTTCACAAGCCCCTCTCTGGTGCTGAATTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp ATCCAATTCAGCACCAGAGAGGGGCTTGTGAAGACACACAATCAACAAACATGGCTGTGCATTTTTGAGTaGTTTGGCGGTAGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: IQFSTREGLVKTHNQQTWLCIFE*FGGRAK
Trigger: TTTTGCCCTACCGCCAAACCACTCAAAAATGCACAG...CCATGTTTGTTGATTGTGTGTCTTCACAAGCCCCTCTCTGGTGCTGAATTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR TCA 90 bp TCTTCCATGCAGCGATCAACTGGGTCAAATGCCTATCATGTATTCTTAAGACATCCTCAACTACTGAAATaGGCCAGTGAGACCACACAG +
Preference number: 2 (lower is better)
Translates to: SSMQRSTGSNAYHVFLRHPQLLK*ASETTQ
Trigger: CTGTGTGGTCTCACTGGCTCATTTCAGTAGTTGAGG...ATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR TCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGTCCTCTTCTGTTGGCTaGTTGAGATTAGTGTACCAT +
Preference number: 2 (lower is better)
Translates to: TVNKAELSYGRANPVCPWSSSVG*LRLVYH
Trigger: ATGGTACACTAATCTCAATCAGCCAACAGAAGAGGA...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR-3UTR GCA 90 bp GGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACAGCCACCCACAATTACTGAAGATAGGCTaGTGCTTCCTCCTGTGGATG +
Preference number: 2 (lower is better)
Translates to: GYSALLANYLNFGYSHPQLLKIG*CFLLWM
Trigger: CATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAA...TTGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAAGCGGAACTTTCATATaGACGTGCAAATCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLESGTFI*TCKSCV
Trigger: CACACAGGATTTGCACGTCCATATGAAAGTTCCGCT...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR-3UTR TCA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACGATTTTCACAGCTCTTaGGGAGCGCTGAGTTTTGGG +
Preference number: 2 (lower is better)
Translates to: ESRKGYSALLANYLNFGYDFHSS*GALSFG
Trigger: CCCAAAACTCAGCGCTCCTCAAGAGCTGTGAAAATC...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR TCA 90 bp GCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAAGGGACTGTAAAATCCTaGAATTCTAGAACTCGCTTC +
Preference number: 2 (lower is better)
Translates to: APLPWQRRSPVPLVSVSKGTVKS*NSRTRF
Trigger: GAAGCGAGTTCTAGAATTTCAGGATTTTACAGTCCC...TTTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR-3UTR GCA 90 bp CTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACATGAAAATTCATGGACTGTaGATTTTTGAGTGGTTTGGC +
Preference number: 2 (lower is better)
Translates to: LMSYTRSWRWGRDCLKHMKIHGL*IFEWFG
Trigger: GCCAAACCACTCAAAAATGCACAGTCCATGAATTTT...CATGTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR CAA 90 bp AAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTaGTACTCAATTTTGTTACCTAACACCATTTCAGATAAAAACCAT +
Preference number: 2 (lower is better)
Translates to: KATNTVGQPVSLPKP*YSILLPNTISDKNH
Trigger: ATGGTTTTTATCTGAAATGGTGTTAGGTAACAAAATTGAGTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CCA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGAATCCTGTGTGTCCTTaGAATCCTAGTGTTACTGAA +
Preference number: 2 (lower is better)
Translates to: FHMDVQILCVLGILVLLKNPVCP*NPSVTE
Trigger: TTCAGTAACACTAGGATTCCAAGGACACACAGGATT...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR-3UTR CCA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACGCACACTTTTCCCTCTaGCTCATGTCAGTTTTTCTG +
Preference number: 2 (lower is better)
Translates to: ESRKGYSALLANYLNFGYAHFSL*LMSVFL
Trigger: CAGAAAAACTGACATGAGCCAGAGGGAAAAGTGTGC...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR GCA 90 bp TGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAAAAATTCATGGACTGTaGATTTTTGAGTGGTTTGGC +
Preference number: 2 (lower is better)
Translates to: CSSSLAKKVSSSISFCIKKIHGL*IFEWFG
Trigger: GCCAAACCACTCAAAAATGCACAGTCCATGAATTTT...TTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR-3UTR GCA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACCATAGACTGTCAACCTaGAAAAGCAAGGCACATAGA +
Preference number: 2 (lower is better)
Translates to: ESRKGYSALLANYLNFGYHRLST*KSKAHR
Trigger: TCTATGTGCCTTGCTTTTGCAGGTTGACAGTCTATG...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR GCA 72 bp GCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTaGACCGCGGCCTTGGATCTGCTGCTCCCGTCCTGT +
Preference number: 3 (lower is better)
Translates to: AWRRSDGRAFIG*TAALDLLLPSC
Trigger: ACAGGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 72 bp GCGACGGCCGTGCATTCATTGGCTGCACCGCGGCCTTaGATCTGCTGCTCCCGTCCTGTACGCTCCCTGCTG +
Preference number: 3 (lower is better)
Translates to: ATAVHSLAAPRP*ICCSRPVRSLL
Trigger: CAGCAGGGAGCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 72 bp TCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTaGCTGCACCGCGGCCTTGGATCTGCTGCTCCCGTC +
Preference number: 3 (lower is better)
Translates to: SSLETERRPCIH*LHRGLGSAAPV
Trigger: GACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 72 bp GCCACGGGGGAGGTCTCACGCCCAGATAGTGGGATCTaGAATGGACCTCAGGTTGGCTCTGGAGCCCGTGCC +
Preference number: 3 (lower is better)
Translates to: ATGEVSRPDSGI*NGPQVGSGARA
Trigger: GGCACGGGCTCCAGAGCCAACCTGAGGTCCATTCCAGATCCCACTATCTGGGCGTGAGACCTCCCCCGTGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR GCA 72 bp CTTGGATCTGCTGCTCCCGTCCTGTACGCTCCCTGCTaGTCTTGGCTCAGTGGGCAAGGAAGGAGCCACGGG +
Preference number: 3 (lower is better)
Translates to: LGSAAPVLYAPC*SWLSGQGRSHG
Trigger: CCCGTGGCTCCTTCCTTGCCCACTGAGCCAAGAGCAGCAGGGAGCGTACAGGACGGGAGCAGCAGATCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR GCA 72 bp GCCGTGCATTCATTGGCTGCACCGCGGCCTTGGATCTaGTGCTCCCGTCCTGTACGCTCCCTGCTGCTCTTG +
Preference number: 3 (lower is better)
Translates to: AVHSLAAPRPWI*CSRPVRSLLLL
Trigger: CAAGAGCAGCAGGGAGCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR GCA 72 bp AGACGGAATTCCAGCCTGGAGACGGAGCGACGGCCGTaGATTCATTGGCTGCACCGCGGCCTTGGAAGCCTC +
Preference number: 3 (lower is better)
Translates to: RRNSSLETERRP*IHWLHRGLGSL
Trigger: GAGGCTTCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTCCGTCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432485.1
3UTR CCA 72 bp GGTGGTGTGCCAGCAGCCGATTACCATGTCCCATCGTaGTTAGGGACCACGGGCCTGGGGACCCCTGACAAC +
Preference number: 3 (lower is better)
Translates to: GGVPAADYHVPS*LGTTGLGTPDN
Trigger: GTTGTCAGGGGTCCCCAGGCCCGTGGTCCCTAACCACGATGGGACATGGTAATCGGCTGCTGGCACACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR GCA 72 bp GTGCATTCATTGGCTGCACCGCGGCCTTGGATCTGCTaGTCCCGTCCTGTACGCTCCCTGCTGCTCTTGGCT +
Preference number: 3 (lower is better)
Translates to: VHSLAAPRPWIC*SRPVRSLLLLA
Trigger: AGCCAAGAGCAGCAGGGAGCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR GCA 72 bp AGACGGAATTCCAGCCTGGAGACGGAGCGACGGCCGTaGATTCATTGGCTGCACCGCGGCCTTGGATCTGCT +
Preference number: 3 (lower is better)
Translates to: RRNSSLETERRP*IHWLHRGLGSA
Trigger: AGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTCCGTCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 72 bp CACCCCAGAACCAGACCTCCTGTAGCTCTGGGCAGGTaGTGTGCCAGCAGCCGATTACCATGTCCCATCGTG +
Preference number: 3 (lower is better)
Translates to: HPRTRPPVALGR*CASSRLPCPIV
Trigger: CACGATGGGACATGGTAATCGGCTGCTGGCACACCACCTGCCCAGAGCTACAGGAGGTCTGGTTCTGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR CAA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGAGAAACCTAGGAGAGTaGGCCAACATTCCAGGACGT +
Preference number: 3 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRRNLGE*ANIPGR
Trigger: ACGTCCTGGAATGTTGGCCAACTCTCCTAGGTTTCT...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR GCA 72 bp CATGACCCCGACTCTCTCCCCACACTTGAAGCGGGCTaGCTGGAAAGCCACAAATACTGTGGGTCAGCCTGT +
Preference number: 3 (lower is better)
Translates to: HDPDSLPTLEAG*LESHKYCGSAC
Trigger: ACAGGCTGACCCACAGTATTTGTGGCTTTCCAGGCAGCCCGCTTCAAGTGTGGGGAGAGAGTCGGGGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR TCA 72 bp GGCGGCTGCTCCATGCCAGTGGCTCCCAGGAGGATATaGAGAGGTGATGCTGGTGTCCTGACGATGACTTTT +
Preference number: 3 (lower is better)
Translates to: GGCSMPVAPRRI*RGDAGVLTMTF
Trigger: AAAAGTCATCGTCAGGACACCAGCATCACCTCTTCATATCCTCCTGGGAGCCACTGGCATGGAGCAGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR TCA 72 bp CCCCTGACAACACTGCAGCTGGCTCAGTGCCGAAACTaGATGTTAAGACAGGTGTGGCTGAGCGCAGCTGGA +
Preference number: 3 (lower is better)
Translates to: PLTTLQLAQCRN*MLRQVWLSAAG
Trigger: TCCAGCTGCGCTCAGCCACACCTGTCTTAACATTCAGTTTCGGCACTGAGCCAGCTGCAGTGTTGTCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR GCA 72 bp GGAAGGACAGGAGGGGCGCTGGGACTCATGAGTAGCTaGTATACTTTGGGATCTGTCCCCCATCCCTGTGTT +
Preference number: 3 (lower is better)
Translates to: GRTGGALGLMSS*YTLGSVPHPCV
Trigger: AACACAGGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCATGAGTCCCAGCGCCCCTCCTGTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
3UTR CCA 72 bp ACCCCGACTCTCTCCCCACACTTGAAGCGGGCTGCCTaGAAAGCCACAAATACTGTGGGTCAGCCTGTATCA +
Preference number: 3 (lower is better)
Translates to: TPTLSPHLKRAA*KATNTVGQPVS
Trigger: TGATACAGGCTGACCCACAGTATTTGTGGCTTTCCAGGCAGCCCGCTTCAAGTGTGGGGAGAGAGTCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR TCA 72 bp ACAGCTCATCTTTCCTCAACTACTGAAATGAGCCAGTaGGACCACACAGGACAGGACGCCAGGTCCCCCTCC +
Preference number: 3 (lower is better)
Translates to: TAHLSSTTEMSQ*DHTGQDARSPS
Trigger: GGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATTTCAGTAGTTGAGGAAAGATGAGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR GCA 72 bp AGTCCTCTGCTCCCAGTTACCCATGTTCCAAACCGCTaGTTCTGGTCCTTCGAGTGCCACACCTGTAACAGG +
Preference number: 3 (lower is better)
Translates to: SPLLPVTHVPNR*FWSFECHTCNR
Trigger: CCTGTTACAGGTGTGGCACTCGAAGGACCAGAAGCAGCGGTTTGGAACATGGGTAACTGGGAGCAGAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR GCA 72 bp CAGGGAAGGAGCCCAGCTCTGTTTCTTCCAGTCCTCTaGTCCCAGTTACCCATGTTCCAAACCGCTGCTTCT +
Preference number: 3 (lower is better)
Translates to: QGRSPALFLPVL*SQLPMFQTAAS
Trigger: AGAAGCAGCGGTTTGGAACATGGGTAACTGGGAGCAGAGGACTGGAAGAAACAGAGCTGGGCTCCTTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 72 bp GGAAGGGGAGCAGGATATGGACACACAGGACTTCAGTaGAAAAGGAACAAGACCTCGAGGCTGCTGACCCAC +
Preference number: 3 (lower is better)
Translates to: GRGAGYGHTGLQ*KRNKTSRLLTH
Trigger: GTGGGTCAGCAGCCTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGCTCCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR CCA 72 bp CTGCTCCCAGTTACCCATGTTCCAAACCGCTGCTTCTaGTCCTTCGAGTGCCACACCTGTAACAGGCACAGT +
Preference number: 3 (lower is better)
Translates to: LLPVTHVPNRCF*SFECHTCNRHS
Trigger: ACTGTGCCTGTTACAGGTGTGGCACTCGAAGGACCAGAAGCAGCGGTTTGGAACATGGGTAACTGGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR CAA 90 bp GAAGCGGGCTGCCTGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCATGGACTGTGCATTTTaGAGTGGTTTGGCGGTAGGG +
Preference number: 3 (lower is better)
Translates to: EAGCLESHKYCGSACITAMDCAF*SGLAVG
Trigger: CCCTACCGCCAAACCACTCAAAAATGCACAGTCCAT...GGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCAGGCAGCCCGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CAA 90 bp GCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGCCTTGGATCCGTTGTACTCAATTTaGTTACCTAACACCATTTCA +
Preference number: 3 (lower is better)
Translates to: AWRRSDGRAFIGCTAALDPLYSI*LPNTIS
Trigger: TGAAATGGTGTTAGGTAACAAAATTGAGTACAACGG...ATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR CAA 90 bp CAACAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGAACTCTCTCCCCACACTaGAAGCGGGCTGCCTGGAAA +
Preference number: 3 (lower is better)
Translates to: QQTWNLRAHCTRWPAQRGTLSPH*KRAAWK
Trigger: TTTCCAGGCAGCCCGCTTCAAGTGTGGGGAGAGAGT...TCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR TCA 72 bp CATTGGCTGCACCGCGGCCTTGGAAGCCTCCGTGGATaGCCAAGTGTGTATTTCACTCGTCTCAATGCTATG +
Preference number: 3 (lower is better)
Translates to: HWLHRGLGSLRG*PSVYFTRLNAM
Trigger: CATAGCATTGAGACGAGTGAAATACACACTTGGTCATCCACGGAGGCTTCCAAGGCCGCGGTGCAGCCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432485.1
3UTR CCA 72 bp AGCCCAGAGTACAATGAGGTGGCCCTCAAAGAAGGCTaGCTGGGGATTTTTGAGATCCCACTGCAGGAACAC +
Preference number: 3 (lower is better)
Translates to: SPEYNEVALKEG*LGIFEIPLQEH
Trigger: GTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTCTTTGAGGGCCACCTCATTGTACTCTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CAA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGAGCTGGCTGGGGATTTTaGAGATCCCACTGCAGGAAC +
Preference number: 3 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRAGWGF*RSHCRN
Trigger: GTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGC...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CAA 90 bp GCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGCTGGCTGGCTGGGGATTTTaGAGATCCCACTGCAGGAAC +
Preference number: 3 (lower is better)
Translates to: AGYGHTGLQWKRNKTSRLAGWGF*RSHCRN
Trigger: GTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGC...CAGCCTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR GCA 72 bp GCTGGCAAACAGGGCTCTGTTGACTCACTGCTAGTCTaGAACCTGTCCAGTAGGAGCTCCTTAAACATGCCT +
Preference number: 3 (lower is better)
Translates to: AGKQGSVDSLLV*NLSSRSSLNMP
Trigger: AGGCATGTTTAAGGAGCTCCTACTGGACAGGTTGCAGACTAGCAGTGAGTCAACAGAGCCCTGTTTGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 72 bp ACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATaGCCTTGGAAGCCTCCGTGGATGACCAAGTGTGTA +
Preference number: 3 (lower is better)
Translates to: TEAWLSSNCIWP*PWKPPWMTKCV
Trigger: TACACACTTGGTCATCCACGGAGGCTTCCAAGGCCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR-3UTR CAA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGTCACTGCCCAAGCCGTaGTACTCAATTTTGTTACCT +
Preference number: 3 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLSLPKP*YSILLP
Trigger: AGGTAACAAAATTGAGTACAACGGCTTGGGCAGTGA...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR GCA 72 bp TGTGTCCTTGGAATCCTAGTGTTACTGAAGATAGGCTaGTGCTTCCTCCTGTGGATGGCAGAGACTGAGGAG +
Preference number: 3 (lower is better)
Translates to: CVLGILVLLKIG*CFLLWMAETEE
Trigger: CTCCTCAGTCTCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCAAGGACACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR GCA 72 bp TCAAAGAAGGCTGGCTGGGGATTTTTGAGATCCCACTaGAGGAACACATCTCTGGGTCTGAAACATGACCCC +
Preference number: 3 (lower is better)
Translates to: SKKAGWGFLRSH*RNTSLGLKHDP
Trigger: GGGGTCATGTTTCAGACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR GCA 72 bp ACACACAATCAACAAACATGGAATCTGAGAGCACACTaGACTAGATGGCCAGCTCAACGGGGACCCCCTTTC +
Preference number: 3 (lower is better)
Translates to: THNQQTWNLRAH*TRWPAQRGPPF
Trigger: GAAAGGGGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTGATTGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CAA 90 bp TCTCAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCATGGACTGTGCATTTTaGAGTGGTTTGGCGGTAGGG +
Preference number: 3 (lower is better)
Translates to: SQQPDDCSCSSSLAKKVSMDCAF*SGLAVG
Trigger: CCCTACCGCCAAACCACTCAAAAATGCACAGTCCAT...GGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR-3UTR CAA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAAAGCTGCCTGCCACCTaGACTTTGCCTCGAGCTCTC +
Preference number: 3 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLEKLPAT*TLPRAL
Trigger: GAGAGCTCGAGGCAAAGTCAAGGTGGCAGGCAGCTT...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR TCA 72 bp CCTCGAGCTCTCCTCTTTCGCGGGACTGTAAAATCCTaGAATTCTAGAACTCGCTTCCTCTTCTGTTGGCTG +
Preference number: 3 (lower is better)
Translates to: PRALLFRGTVKS*NSRTRFLFCWL
Trigger: CAGCCAACAGAAGAGGAAGCGAGTTCTAGAATTTCAGGATTTTACAGTCCCGCGAAAGAGGAGAGCTCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR CCA 72 bp ATCTGGTTAGCATCATTCAGAGCTGGTACGGAAGCCTaGCTCTCTTCTAACTGTATTTGGCCATGGCCTTGG +
Preference number: 3 (lower is better)
Translates to: IWLASFRAGTEA*LSSNCIWPWPW
Trigger: CCAAGGCCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGATGCTAACCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 72 bp CAACAAACATGGAATCTGAGAGCACACTGCACTAGATaGCCAGCTCAACGGGGACCCCCTTTCATCATCAAA +
Preference number: 3 (lower is better)
Translates to: QQTWNLRAHCTR*PAQRGPPFIIK
Trigger: TTTGATGATGAAAGGGGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CAA 90 bp ACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCCCTCCGTTGTACTCAATTTaGTTACCTAACACCATTTCA +
Preference number: 3 (lower is better)
Translates to: TWNLRAHCTRWPAQRGPPPLYSI*LPNTIS
Trigger: TGAAATGGTGTTAGGTAACAAAATTGAGTACAACGG...AGGGGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR TCA 72 bp CGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTaGGGTTCTATACTCAGCAGTAAAAGTAGAGGACCC +
Preference number: 3 (lower is better)
Translates to: RSGPFPGEREHS*GSILSSKSRGP
Trigger: GGGTCCTCTACTTTTACTGCTGAGTATAGAACCTCAGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR TCA 72 bp ACTGTATTTGGCCATGGCCTTGGAAGCCTCCGTGGATaGCCAAGTGTGTATTTCACTCGTCTCAATGCTATG +
Preference number: 3 (lower is better)
Translates to: TVFGHGLGSLRG*PSVYFTRLNAM
Trigger: CATAGCATTGAGACGAGTGAAATACACACTTGGTCATCCACGGAGGCTTCCAAGGCCATGGCCAAATACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR TCA 72 bp TGGTCCTTCGAGTGCCACACCTGTAACAGGCACAGTTaGAACTATCTCTGCCATGTTGGTGACACTATAGCT +
Preference number: 3 (lower is better)
Translates to: WSFECHTCNRHS*NYLCHVGDTIA
Trigger: AGCTATAGTGTCACCAACATGGCAGAGATAGTTTCAACTGTGCCTGTTACAGGTGTGGCACTCGAAGGACCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 72 bp TTCCCTCTGGCTCATGTCAGTTTTTCTGCTCCAGTGTaGCATAGACTGTCAACCTGCAAAAGCAAGGCACAT +
Preference number: 3 (lower is better)
Translates to: FPLAHVSFSAPV*HRLSTCKSKAH
Trigger: ATGTGCCTTGCTTTTGCAGGTTGACAGTCTATGCCACACTGGAGCAGAAAAACTGACATGAGCCAGAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR CCA 72 bp TCTAACTGTATTTGGCCATGGCCTTGGAAGCCTCCGTaGATGACCAAGTGTGTATTTCACTCGTCTCAATGC +
Preference number: 3 (lower is better)
Translates to: SNCIWPWPWKPP*MTKCVFHSSQC
Trigger: GCATTGAGACGAGTGAAATACACACTTGGTCATCCACGGAGGCTTCCAAGGCCATGGCCAAATACAGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CCA 72 bp AGAGAGGGGCTTGTGAAGACACACAATCAACAAACATaGAATCTGAGAGCACACTGCACTAGATGGCCAGCT +
Preference number: 3 (lower is better)
Translates to: REGLVKTHNQQT*NLRAHCTRWPA
Trigger: AGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTGATTGTGTGTCTTCACAAGCCCCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR-3UTR CAA 90 bp ATCCAATTCAGCACCAGAGAGGGGCTTGTGAAGACACACAATCAACAAACATGGATGGACTGTGCATTTTaGAGTGGTTTGGCGGTAGGG +
Preference number: 3 (lower is better)
Translates to: IQFSTREGLVKTHNQQTWMDCAF*SGLAVG
Trigger: CCCTACCGCCAAACCACTCAAAAATGCACAGTCCAT...CCATGTTTGTTGATTGTGTGTCTTCACAAGCCCCTCTCTGGTGCTGAATTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR TCA 72 bp CGAGGGCAACCCATGAGAGATCTTAAGGAGTGGTTCTaGCAAGTGCAAACTTGTGTTTTAGGAAGACCACTT +
Preference number: 3 (lower is better)
Translates to: RGQPMRDLKEWF*QVQTCVLGRPL
Trigger: AAGTGGTCTTCCTAAAACACAAGTTTGCACTTGTCAGAACCACTCCTTAAGATCTCTCATGGGTTGCCCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330495.8
3UTR GCA 72 bp GGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTaGCCAAGCCGTTGTACTCAATTTTGTTACCTAACA +
Preference number: 3 (lower is better)
Translates to: GKPQILWVSLYH*PSRCTQFCYLT
Trigger: TGTTAGGTAACAAAATTGAGTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR GCA 72 bp TGCTATACTTTGGGATCTGTCCCCCATCCCTGTGTTTaGAGTGTTTCAGCGACCATTTCAACATCTCCAAAA +
Preference number: 3 (lower is better)
Translates to: CYTLGSVPHPCV*SVSATISTSPK
Trigger: TTTTGGAGATGTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCCAAAGTATAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
3UTR CCA 72 bp GTGCTCCCTCTAATGAGTTACACTAGAAGCTGGAGATaGGGAAGGGATTGCCTGAAACACATGAATAGGAAA +
Preference number: 3 (lower is better)
Translates to: VLPLMSYTRSWR*GRDCLKHMNRK
Trigger: TTTCCTATTCATGTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGGGAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR CCA 72 bp GAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTaGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTT +
Preference number: 3 (lower is better)
Translates to: ELSYGRANPVCP*NPSVTEDRLLL
Trigger: AAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
3UTR TCA 72 bp CCTGAAATTCTAGAACTCGCTTCCTCTTCTGTTGGCTaGTTGAGATTAGTGTACCATTTCGTTCCTTGGGTT +
Preference number: 3 (lower is better)
Translates to: PEILELASSSVG*LRLVYHFVPWV
Trigger: AACCCAAGGAACGAAATGGTACACTAATCTCAATCAGCCAACAGAAGAGGAAGCGAGTTCTAGAATTTCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
3UTR GCA 72 bp AGCCCTTTTCTGACACGAATCCAGGAAAGGATACTCTaGACTTCTGGCCAATTATTTAAACTTTGGATACAG +
Preference number: 3 (lower is better)
Translates to: SPFLTRIQERIL*TSGQLFKLWIQ
Trigger: CTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTCGTGTCAGAAAAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR CCA 72 bp AGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTaGATACAGCCACCCACAATGTGGTTATTTAAGAAG +
Preference number: 3 (lower is better)
Translates to: RILCTSGQLFKL*IQPPTMWLFKK
Trigger: CTTCTTAAATAACCACATTGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR GCA 72 bp AAATGTCTCTTCCATGCAGCGATCAACTGGGTCAAATaGCTATCATGTATTCTTAAGACATGTATTGTTTTT +
Preference number: 3 (lower is better)
Translates to: KCLFHAAINWVK*LSCILKTCIVF
Trigger: AAAAACAATACATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGAGACATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp GGAGTGCAGTGGCGCGACCTCGGCTCACGGCACCTACAGTCTCCCGAGTTCAAGGAGGCCAGCAGTGGGTaGGGCTGCGCTTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GVQWRDLGSRHLQSPEFKEASSG*GCAWRC
Trigger: GCAGCGCCAAGCGCAGCCGCACCCACTGCTGGCCTC...CTTGAACTCGGGAGACTGTAGGTGCCGTGAGCCGAGGTCGCGCCACTGCACTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGGTTCCCATCGGCGGCTaGTCCATGCCAGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRVPIGG*SMPVAP
Trigger: GGGAGCCACTGGCATGGAGCAGCCGCCGATGGGAAC...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR CAA 72 bp AGCGACGGCCGTGCATTCATTGGCTGCACCGCGGCCTaGGATCTGCTGCTCCCGTCCTGTACGCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SDGRAFIGCTAA*DLLLPSCTLPA
Trigger: AGCAGGGAGCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CAA 72 bp TTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATaGGCTGCACCGCGGCCTTGGATCTGCTGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: FQPGDGATAVHS*AAPRPWICCSR
Trigger: ACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
3UTR CAA 72 bp TTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATaGGCTGCACCGCGGCCTTGGAAGCCTCCGTGGATG +
Preference number: 4 (lower is better)
Translates to: FQPGDGATAVHS*AAPRPWKPPWM
Trigger: CATCCACGGAGGCTTCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432485.1
CDS-3UTR TCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGCCCCGTGAGGCTCGGTaGCAGTCTCTCTCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRPREAR*QSLSGH
Trigger: GTGACCAGAGAGAGACTGTCACCGAGCCTCACGGGG...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGAGACCTCGAGGCTGCTaGCCCACAGCATCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRRPRGC*PTASLC
Trigger: GCAGAGGGATGCTGTGGGTCAGCAGCCTCGAGGTCT...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp GCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGCCTTGGATACCTCAGGTTGGCTCTaGAGCCCGTGCCAAAGACCC +
Preference number: 4 (lower is better)
Translates to: AWRRSDGRAFIGCTAALDTSGWL*SPCQRP
Trigger: GGGTCTTTGGCACGGGCTCCAGAGCCAACCTGAGGT...ATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGTCCGCGGCCCGCGCTTaGCCAGCCAGCTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGERESAARA*PASSAP
Trigger: AGGGGCTGAGCTGGCTGGGCAAGCGCGGGCCGCGGA...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGCCTTGGATAGAGGAGGGGTCTTGTaGTTTCCGAGGGGCACCAAG +
Preference number: 4 (lower is better)
Translates to: AWRRSDGRAFIGCTAALDRGGVL*FPRGTK
Trigger: CTTGGTGCCCCTCGGAAAGCACAAGACCCCTCCTCT...ATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGGCACACTGCACTAGATaGCCAGCTCAACGGGGACCC +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRAHCTR*PAQRGP
Trigger: GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGC...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GGAGTGCAGTGGCGCGACCTCGGCTCACGGCACCTACAGTCTCCCGAGTTCAAGGGCTCCAGCCTCGTCTaGCTGCCGCTGGTGTTATAT +
Preference number: 4 (lower is better)
Translates to: GVQWRDLGSRHLQSPEFKGSSLV*LPLVLY
Trigger: ATATAACACCAGCGGCAGTCAGACGAGGCTGGAGCC...CTTGAACTCGGGAGACTGTAGGTGCCGTGAGCCGAGGTCGCGCCACTGCACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR TCA 90 bp GGGGCGCTGGGACTCATGAGTAGCTGCTATACTTTGGGATCTGTCCCCCATCCCCAGGCCTGTCTCAAGTaGTCCGCCCGCCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GALGLMSSCYTLGSVPHPQACLK*SARLCL
Trigger: GAGGCAGAGGCGGGCGGATCACTTGAGACAGGCCTG...GGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCATGAGTCCCAGCGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp CACTGCAGGAACACATCTCTGGGTCTGAAACATGACCCCGACTCTCTCCCCACACTCAGCCCCTGCAGCTaGAGCCCCGTCGTCGCCAGG +
Preference number: 4 (lower is better)
Translates to: HCRNTSLGLKHDPDSLPTLSPCS*SPVVAR
Trigger: CCTGGCGACGACGGGGCTGCAGCTGCAGGGGCTGAG...TGTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGTTCCTGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCAACTTCGAATGGGGCCTaGACGGGCTCCTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPTSNGA*TGSSGT
Trigger: AGTGCCAGAGGAGCCCGTCCAGGCCCCATTCGAAGT...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGGTAGCTCTGGGCAGGTaGTGTGCCAGCAGCCGATTA +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRVALGR*CASSRL
Trigger: TAATCGGCTGCTGGCACACCACCTGCCCAGAGCTAC...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GAAGCGGGCTGCCTGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCGTCCACTTGGGAGGTTaGGACGGGCACTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: EAGCLESHKYCGSACITAVHLGG*DGHWRA
Trigger: GGCCCTCCAGTGCCCGTCTCAACCTCCCAAGTGGAC...GGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCAGGCAGCCCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GGAGTGCAGTGGCGCGACCTCGGCTCACGGCACCTACAGTCTCCCGAGTTCAAGCTGGAACTCAGAGGCTaGAAGCAGGAGCTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GVQWRDLGSRHLQSPEFKLELRG*KQELAD
Trigger: GTCAGCAAGCTCCTGCTTTCAGCCTCTGAGTTCCAG...CTTGAACTCGGGAGACTGTAGGTGCCGTGAGCCGAGGTCGCGCCACTGCACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR TCA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCATCTGGGTCTGAAACATaGCCCCGACTCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPSGSET*PRLSPH
Trigger: GTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGA...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGGCTCCCAGGAGGATATaGAGAGGTGATGCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRAPRRI*RGDAGV
Trigger: GACACCAGCATCACCTCTTCATATCCTCCTGGGAGC...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp AAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCGTCCACTTGGGAGGTTaGGACGGGCACTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: KERNCLGESFSQAGVQWRVHLGG*DGHWRA
Trigger: GGCCCTCCAGTGCCCGTCTCAACCTCCCAAGTGGAC...GCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp GGAGTGCAGTGGCGCGACCTCGGCTCACGGCACCTACAGTCTCCCGAGTTCAAGACAGAAGACCTTGTCTaGTATGGAGGCTGGAGACCG +
Preference number: 4 (lower is better)
Translates to: GVQWRDLGSRHLQSPEFKTEDLV*YGGWRP
Trigger: CGGTCTCCAGCCTCCATAGCAGACAAGGTCTTCTGT...CTTGAACTCGGGAGACTGTAGGTGCCGTGAGCCGAGGTCGCGCCACTGCACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp GGAGTGCAGTGGCGCGACCTCGGCTCACGGCACCTACAGTCTCCCGAGTTCAAGAGACCTTGTCTGCTATaGAGGCTGGAGACCGTAACC +
Preference number: 4 (lower is better)
Translates to: GVQWRDLGSRHLQSPEFKRPCLL*RLETVT
Trigger: GGTTACGGTCTCCAGCCTCCATAGCAGACAAGGTCT...CTTGAACTCGGGAGACTGTAGGTGCCGTGAGCCGAGGTCGCGCCACTGCACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCATGCTGCTTCCTCCTGTaGATGGCAGAGACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPCCFLL*MAETEE
Trigger: CTCCTCAGTCTCTGCCATCCACAGGAGGAAGCAGCA...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CCA 90 bp GCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGCCTTGGATAAGGGGAGCAGGATATaGACACACAGGACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: AWRRSDGRAFIGCTAALDKGSRI*THRTSV
Trigger: CACTGAAGTCCTGTGTGTCCATATCCTGCTCCCCTT...ATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GCAGGGCTGGCCTCACAACAACTCCTCTCCTACATTGTCAGGACAGGGAAGGAGCGGCCGTGCATTCATTaGCTGCACCGCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: AGLASQQLLSYIVRTGKERPCIH*LHRGLG
Trigger: TCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCG...CTCCTTCCCTGTCCTGACAATGTAGGAGAGGAGTTGTTGTGAGGCCAGCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGGGCAGCTATTTTTACTaGCCCAGACCAGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRGSYFY*PRPAQG
Trigger: TCCTTGGGCTGGTCTGGGCCAGTAAAAATAGCTGCC...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR CAA 72 bp CACGCCCAGATAGTGGGATCTGGAATGGACCTCAGGTaGGCTCTGGAGCCCGTGCCAAAGACCCTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: HAQIVGSGMDLR*ALEPVPKTLSG
Trigger: GCCTGAAAGGGTCTTTGGCACGGGCTCCAGAGCCAACCTGAGGTCCATTCCAGATCCCACTATCTGGGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTAGTCGCCAGGTCTACCTaGGCCTACGGAGCCGACAGA +
Preference number: 4 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLVARST*AYGADR
Trigger: TCTGTCGGCTCCGTAGGCTCAGGTAGACCTGGCGAC...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGATGACAGAGACCACTTaGGGAAAGCCAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRMTETT*GKPAAS
Trigger: AGAAGCAGCTGGCTTTCCTCAAGTGGTCTCTGTCAT...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGAAGGCACCATGTATTTaGTCACACCCAGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRKAPCI*SHPAEE
Trigger: CTCCTCTGCTGGGTGTGATCAAATACATGGTGCCTT...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGGGAAGCCTCCGTGGATaGCCAAGTGTGTATTTCACT +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRGSLRG*PSVYFT
Trigger: AGTGAAATACACACTTGGTCATCCACGGAGGCTTCC...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp TGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACGGGCCTGGGGACCCCTaGCAACACTGCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: WKATNTVGQPVSLPKPLYGPGDP*QHCSWL
Trigger: GAGCCAGCTGCAGTGTTGTCAGGGGTCCCCAGGCCC...GTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp AGAAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGGCCAATCAGACGGCGTaGGGCCAGCAGTGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: RKERNCLGESFSQAGVQWANQTA*GQQWVR
Trigger: CCGCACCCACTGCTGGCCTCACGCCGTCTGATTGGC...CCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp GGGAGCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGAGCCAGCTCAGCCCCTaGAGCTGCAGCCCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: GSRIWTHRTSVEKEQDLESQLSP*SCSPVV
Trigger: GACGACGGGGCTGCAGCTGCAGGGGCTGAGCTGGCT...CTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCAAGACCTTTGGCTCCATaGTCTCGCTTCTCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPRPLAP*SRFSLP
Trigger: GGGCAAAGAGAAGCGAGAGCATGGAGCCAAAGGTCT...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGCCTTGGATTCTGATGGGCATCTCTaGCTGTTGCTAAAGGCATCT +
Preference number: 4 (lower is better)
Translates to: AWRRSDGRAFIGCTAALDSDGHL*LLLKAS
Trigger: AGATGCCTTTAGCAACAGGCAGAGATGCCCATCAGA...ATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGCCTTGGATGGAGTCCTCTTGAAATaGCAGTTTCTCTTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AWRRSDGRAFIGCTAALDGVLLK*QFLLPC
Trigger: GCAAGGCAAGAGAAACTGGCATTTCAAGAGGACTCC...ATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCCCACAGCATCCCTCTaGCCACAGACTCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGEREPTASL*PQTPAG
Trigger: GCCTGCAGGAGTCTGTGGGCAGAGGGATGCTGTGGG...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp AGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCCCCACAGCATCCCTCTaGCCACAGACTCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RLRRWLDVVQVHFQEKGSPTASL*PQTPAG
Trigger: GCCTGCAGGAGTCTGTGGGCAGAGGGATGCTGTGGG...GCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp GGAGTGCAGTGGCGCGACCTCGGCTCACGGCACCTACAGTCTCCCGAGTTCAAGCCCCATCCCTGTGTTTaGAGTGTTTCAGCGACCATT +
Preference number: 4 (lower is better)
Translates to: GVQWRDLGSRHLQSPEFKPHPCV*SVSATI
Trigger: AATGGTCGCTGAAACACTGCAAACACAGGGATGGGG...CTTGAACTCGGGAGACTGTAGGTGCCGTGAGCCGAGGTCGCGCCACTGCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCAGAGGCACCACAGGTTTaGTTACCTGGTGGAGAGATG +
Preference number: 4 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPEAPQV*LPGGEM
Trigger: CATCTCTCCACCAGGTAACCAAACCTGTGGTGCCTC...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GCAGGGCTGGCCTCACAACAACTCCTCTCCTACATTGTCAGGACAGGGAAGGAGGCTCCCTGCTGCTCTTaGCTCAGTGGGCAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AGLASQQLLSYIVRTGKEAPCCS*LSGQGR
Trigger: CCTTCCTTGCCCACTGAGCCAAGAGCAGCAGGGAGC...CTCCTTCCCTGTCCTGACAATGTAGGAGAGGAGTTGTTGTGAGGCCAGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp CAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCGGCCCCCTGGATCTCTaGAGACCTTTGGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: QTWNLRAHCTRWPAQRGPGPLDL*RPLAPC
Trigger: GCATGGAGCCAAAGGTCTTCAGAGATCCAGGGGGCC...GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp AGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCAGCTGCCTGCCACCTTaGCTTTGCCTCGAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RLRRWLDVVQVHFQEKGSSCLPP*LCLELS
Trigger: GGAGAGCTCGAGGCAAAGTCAAGGTGGCAGGCAGCT...GCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR TCA 90 bp CAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCGTGGATGGCAGAGACTaGGGAGGTGGCTGGATGTCG +
Preference number: 4 (lower is better)
Translates to: QTWNLRAHCTRWPAQRGPVDGRD*GGGWMS
Trigger: CGACATCCAGCCACCTCCTCAGTCTCTGCCATCCAC...GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp TATCAAAAGAGCATCCAGCTCTCGACTCTGCACAGCTGCCTTCTGGGCCCTGGTGTGGATGGCAGAGACTaGGGAGGTGGCTGGATGTCG +
Preference number: 4 (lower is better)
Translates to: YQKSIQLSTLHSCLLGPGVDGRD*GGGWMS
Trigger: CGACATCCAGCCACCTCCTCAGTCTCTGCCATCCAC...ACCAGGGCCCAGAAGGCAGCTGTGCAGAGTCGAGAGCTGGATGCTCTTTTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR TCA 90 bp CACTGCAGGAACACATCTCTGGGTCTGAAACATGACCCCGACTCTCTCCCCACACTCTCTCCCCACACTTaGAGCGGGCTGCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: HCRNTSLGLKHDPDSLPTLSPHT*SGLPGK
Trigger: CTTTCCAGGCAGCCCGCTTCAAGTGTGGGGAGAGAG...TGTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGTTCCTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCAGATTTTCACAGCTCTTaGGGAGCGCTGAGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPDFHSS*GALSFG
Trigger: CCCAAAACTCAGCGCTCCTCAAGAGCTGTGAAAATC...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp AAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCGAGTCTTAACCACGTaGCCCTCCCCGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KREKLLRRVFLPGWSAVARVLTT*PSPLSS
Trigger: GCTGGAGAGCGGGGAGGGTCACGTGGTTAAGACTCG...CGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGTCCAGCTCTCGACTCTaGACAGCTGCCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGERESSSRL*TAAFWA
Trigger: GGCCCAGAAGGCAGCTGTGCAGAGTCGAGAGCTGGA...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR GCA 90 bp AGAAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGGCCCCTCCGGAGAGCTaGAGCCAATCAGACGGCGTG +
Preference number: 4 (lower is better)
Translates to: RKERNCLGESFSQAGVQWAPPES*SQSDGV
Trigger: CACGCCGTCTGATTGGCTGCAGCTCTCCGGAGGGGC...CCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp GGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACATCTCTCCCAGGCTGGAGTaGAGTGGCGCGACCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GICPPSLCLQCFSDHFNISPRLE*SGATSA
Trigger: AGCCGAGGTCGCGCCACTGCACTCCAGCCTGGGAGA...GATGTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp CCTCTGCCCACAGACTCCTGCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCCAGAGACTGAGGAGGTaGCTGGATGTCGTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: PLPTDSCRHKPRNSANSSQRLRR*LDVVQV
Trigger: GACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG...GCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGCAGGAGTCTGTGGGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGTCAAAGAAGGCTGGCTaGGGATTTTTGAGATCCCAC +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRSKKAG*GFLRSH
Trigger: GTGGGATCTCAAAAATCCCCAGCCAGCCTTCTTTGA...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGTTTTCTGCTCCAGTGTaGCATAGACTGTCAACCTGC +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRFSAPV*HRLSTC
Trigger: GCAGGTTGACAGTCTATGCCACACTGGAGCAGAAAA...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp GCAGGGCTGGCCTCACAACAACTCCTCTCCTACATTGTCAGGACAGGGAAGGAGTACCATGTCCCATCGTaGTTAGGGACCACGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AGLASQQLLSYIVRTGKEYHVPS*LGTTGL
Trigger: CAGGCCCGTGGTCCCTAACCACGATGGGACATGGTA...CTCCTTCCCTGTCCTGACAATGTAGGAGAGGAGTTGTTGTGAGGCCAGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GCAGGGCTGGCCTCACAACAACTCCTCTCCTACATTGTCAGGACAGGGAAGGAGCGGTATCTTAGCTTCTaGGTCTTCATGGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: AGLASQQLLSYIVRTGKERYLSF*VFMAGA
Trigger: GGCCCCAGCCATGAAGACTCAGAAGCTAAGATACCG...CTCCTTCCCTGTCCTGACAATGTAGGAGAGGAGTTGTTGTGAGGCCAGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp CAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTGTCCACTTGGGAGGTTaGGACGGGCACTGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: QQPDDCSCSSSLAKKVSSVHLGG*DGHWRA
Trigger: GGCCCTCCAGTGCCCGTCTCAACCTCCCAAGTGGAC...ACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR TCA 90 bp AGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCGGCTCCAGCCTCGTCTaGCTGCCGCTGGTGTTATAT +
Preference number: 4 (lower is better)
Translates to: RLRRWLDVVQVHFQEKGSGSSLV*LPLVLY
Trigger: ATATAACACCAGCGGCAGTCAGACGAGGCTGGAGCC...GCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR TCA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTAGCTGCCTGCCACCTTaGCTTTGCCTCGAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPSCLPP*LCLELS
Trigger: GGAGAGCTCGAGGCAAAGTCAAGGTGGCAGGCAGCT...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR TCA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCAGAAAGGGAGCATTCCTaGGGTTCTATACTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPEREHS*GSILSS
Trigger: ACTGCTGAGTATAGAACCTCAGGAATGCTCCCTTTC...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR TCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGTCTTTCCTCAACTACTaGAATGAGCCAGTGAGACCA +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRSFLNY*NEPVRP
Trigger: TGGTCTCACTGGCTCATTTCAGTAGTTGAGGAAAGA...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGTGCTTTAACAGGAGATaGGGTACAGCTGAACTCATG +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRCFNRR*GTAELM
Trigger: CATGAGTTCAGCTGTACCTCATCTCCTGTTAAAGCA...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp CAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGAGGAGGGGTCTTGTaGTTTCCGAGGGGCACCAAG +
Preference number: 4 (lower is better)
Translates to: QRLRRWLDVVQVHFQEKGRGGVL*FPRGTK
Trigger: CTTGGTGCCCCTCGGAAAGCACAAGACCCCTCCTCT...CCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGCAAGTTCGATGGGGCTaGTTCTTTAAGGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRQVRWG*FFKGRT
Trigger: AGTTCTTCCCTTAAAGAAGCAGCCCCATCGAACTTG...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCAGATTCAGCTGCTCTGTaGTGGATGAAAATCCGTCCA +
Preference number: 4 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPDSAAL*WMKIRP
Trigger: TGGACGGATTTTCATCCAGCACAGAGCAGCTGAATC...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp AAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCTGTGGCTGCTTGTGGTaGCCAGACTTGGTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: KERNCLGESFSQAGVQWRCGCLW*PDLVAA
Trigger: AGCGGCAACCAAGTCTGGGCACCACAAGCAGCCACA...GCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp GCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGCTGCGGCCTTGGATCTGCTaGTCCCGTCCTGTACGCTCC +
Preference number: 4 (lower is better)
Translates to: AGYGHTGLQWKRNKTSRLRPWIC*SRPVRS
Trigger: GGAGCGTACAGGACGGGAGCAGCAGATCCAAGGCCG...CAGCCTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGAACGGAGCGACGGCCGTaGATTCATTGGCTGCACCGC +
Preference number: 4 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRTERRP*IHWLHR
Trigger: GCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGT...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp ACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCCCTCAGAACCTCCTGCTGTaGAGTCCACTAGCCCACATC +
Preference number: 4 (lower is better)
Translates to: TWNLRAHCTRWPAQRGPPQNLLL*SPLAHI
Trigger: GATGTGGGCTAGTGGACTCCACAGCAGGAGGTTCTG...AGGGGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGTCCTGCCTGGCCCCCTaGATCTCTGAAGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: AETEEVAGCRSGPFPGERSCLAP*ISEDLW
Trigger: CCAAAGGTCTTCAGAGATCCAGGGGGCCAGGCAGGA...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGTGGCTGGGGCCAGTTTaGAGGCAAGGATGGACAGCT +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGEREWLGPV*RQGWTA
Trigger: AGCTGTCCATCCTTGCCTCCAAACTGGCCCCAGCCA...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGTGTGGTGCCCAGACTTaGTTGCCGCTTGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLCGAQT*LPLAVR
Trigger: CCTCACTGCAAGCGGCAACCAAGTCTGGGCACCACA...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTAGCTTCCTCCTGTGGATaGCAGAGACTGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLASSCG*QRLRRW
Trigger: CCACCTCCTCAGTCTCTGCCATCCACAGGAGGAAGC...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CCA 90 bp AGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCGCAACTTACTTCGAATaGGGCCTGGACGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RLRRWLDVVQVHFQEKGSATYFE*GLDGLL
Trigger: GAGGAGCCCGTCCAGGCCCCATTCGAAGTAAGTTGC...GCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCACCTTGGAAGCCTCCGTaGATGACCAAGTGTGTATTT +
Preference number: 4 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPPWKPP*MTKCVF
Trigger: AAATACACACTTGGTCATCCACGGAGGCTTCCAAGG...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTACCAAACCGCTGCTTCTaGTCCTTCGAGTGCCACACC +
Preference number: 4 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLPNRCF*SFECHT
Trigger: GGTGTGGCACTCGAAGGACCAGAAGCAGCGGTTTGG...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTGCACACTGCACTAGATaGCCAGCTCAACGGGGACCC +
Preference number: 4 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPAHCTR*PAQRGP
Trigger: GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGC...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp AGAAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGGGGTGCGGCTGCGCTTaGCGCTGCGCATATCCGAAT +
Preference number: 4 (lower is better)
Translates to: RKERNCLGESFSQAGVQWGCGCA*RCAYPN
Trigger: ATTCGGATATGCGCAGCGCCAAGCGCAGCCGCACCC...CCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR TCA 90 bp GAAGGCTGGCTGGGGATTTTTGAGATCCCACTGCAGGAACACATCTCTGGGTCTTGGTTTACCTCCCCGTaGGGCTCGGTGACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: EGWLGIFEIPLQEHISGSWFTSP*GSVTVS
Trigger: AGAGACTGTCACCGAGCCTCACGGGGAGGTAAACCA...AGACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp AAAAGAGCATCCAGCTCTCGACTCTGCACAGCTGCCTTCTGGGCCCTGGTAAAGCTGGAACTCAGAGGCTaGAAGCAGGAGCTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: KRASSSRLCTAAFWALVKLELRG*KQELAD
Trigger: GTCAGCAAGCTCCTGCTTTCAGCCTCTGAGTTCCAG...CTTTACCAGGGCCCAGAAGGCAGCTGTGCAGAGTCGAGAGCTGGATGCTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR TCA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGAAGCTGCCTGCCACCTTaGCTTTGCCTCGAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRSCLPP*LCLELS
Trigger: GGAGAGCTCGAGGCAAAGTCAAGGTGGCAGGCAGCT...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCATCTTTCCTCAACTACTaGAATGAGCCAGTGAGACCA +
Preference number: 4 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPSFLNY*NEPVRP
Trigger: TGGTCTCACTGGCTCATTTCAGTAGTTGAGGAAAGA...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp CACTGCAGGAACACATCTCTGGGTCTGAAACATGACCCCGACTCTCTCCCCACAGAGCCCAGAGTACAATaGGGTGGCCCTCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: HCRNTSLGLKHDPDSLPTEPRVQ*GGPQRR
Trigger: CCTTCTTTGAGGGCCACCTCATTGTACTCTGGGCTC...TGTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGTTCCTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGCTCCCAGGAGGATATaGAGAGGTGATGCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: AETEEVAGCRSGPFPGERAPRRI*RGDAGV
Trigger: GACACCAGCATCACCTCTTCATATCCTCCTGGGAGC...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp CACTGCAGGAACACATCTCTGGGTCTGAAACATGACCCCGACTCTCTCCCCACACCTGGTAAAGCTGCCTaGCACCTTGACTTTGCCTCG +
Preference number: 4 (lower is better)
Translates to: HCRNTSLGLKHDPDSLPTPGKAA*HLDFAS
Trigger: CGAGGCAAAGTCAAGGTGGCAGGCAGCTTTACCAGG...TGTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGTTCCTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp AAAAGAGCATCCAGCTCTCGACTCTGCACAGCTGCCTTCTGGGCCCTGGTAAAGCCTGGTAAAGCTGCCTaGCACCTTGACTTTGCCTCG +
Preference number: 4 (lower is better)
Translates to: KRASSSRLCTAAFWALVKPGKAA*HLDFAS
Trigger: CGAGGCAAAGTCAAGGTGGCAGGCAGCTTTACCAGG...CTTTACCAGGGCCCAGAAGGCAGCTGTGCAGAGTCGAGAGCTGGATGCTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR GCA 90 bp AGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCCTGCCCACAGACTCCTaGAGGCACAAACCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: RLRRWLDVVQVHFQEKGSLPTDS*RHKPRN
Trigger: GTTTCTGGGTTTGTGCCTGCAGGAGTCTGTGGGCAG...GCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGAGGCTCCTCAAGGGATaGCACGGTGTAGACATCTGC +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGERERLLKG*HGVDIC
Trigger: GCAGATGTCTACACCGTGCCATCCCTTGAGGAGCCT...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp CAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCCTGAGTCTTCATGGCTaGGGCCAGTTTGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: QTWNLRAHCTRWPAQRGPLSLHG*GQFGGK
Trigger: CTTGCCTCCAAACTGGCCCCAGCCATGAAGACTCAG...GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TATCAAAAGAGCATCCAGCTCTCGACTCTGCACAGCTGCCTTCTGGGCCCTGGTCTGAGTCTTCATGGCTaGGGCCAGTTTGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: YQKSIQLSTLHSCLLGPGLSLHG*GQFGGK
Trigger: CTTGCCTCCAAACTGGCCCCAGCCATGAAGACTCAG...ACCAGGGCCCAGAAGGCAGCTGTGCAGAGTCGAGAGCTGGATGCTCTTTTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CCA 90 bp AAAAGAGCATCCAGCTCTCGACTCTGCACAGCTGCCTTCTGGGCCCTGGTAAAGGCTTCTGAGTCTTCATaGCTGGGGCCAGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: KRASSSRLCTAAFWALVKASESS*LGPVWR
Trigger: CCTCCAAACTGGCCCCAGCCATGAAGACTCAGAAGC...CTTTACCAGGGCCCAGAAGGCAGCTGTGCAGAGTCGAGAGCTGGATGCTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTACAGAGCAGTCTGCTCTaGTCTGGACTATGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLQSSLL*SGLWQC
Trigger: GCACTGCCATAGTCCAGACCAGAGCAGACTGCTCTG...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp GAAGCGGGCTGCCTGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCAGGCCCTGTGTAAACTaGGTCATGAAGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: EAGCLESHKYCGSACITARPCVN*VMKSLC
Trigger: GCAGAGGCTCTTCATGACCCAGTTTACACAGGGCCT...GGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCAGGCAGCCCGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp AAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCCATGCTGGCTCCAAATaGATAGGACTCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: KERNCLGESFSQAGVQWRHAGSK*IGLCPP
Trigger: CGGTGGGCAGAGTCCTATCCATTTGGAGCCAGCATG...GCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp AAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGTGTGGTGCCCAGACTTaGTTGCCGCTTGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: KREKLLRRVFLPGWSAVACGAQT*LPLAVR
Trigger: CCTCACTGCAAGCGGCAACCAAGTCTGGGCACCACA...CGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp GGGGCGCTGGGACTCATGAGTAGCTGCTATACTTTGGGATCTGTCCCCCATCCCTCCAATCCACGAACCTaGAACTCAGAGGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: GALGLMSSCYTLGSVPHPSNPRT*NSEAES
Trigger: GCTTTCAGCCTCTGAGTTCCAGGTTCGTGGATTGGA...GGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCATGAGTCCCAGCGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp TGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACACTTCGAATGGGGCCTaGACGGGCTCCTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: WKATNTVGQPVSLPKPLYTSNGA*TGSSGT
Trigger: AGTGCCAGAGGAGCCCGTCCAGGCCCCATTCGAAGT...GTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp CAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCCCCCCTTCTCAACTTTaGAGCAGGGGAAGGGACCTA +
Preference number: 4 (lower is better)
Translates to: QTWNLRAHCTRWPAQRGPPPSQL*SRGRDL
Trigger: TAGGTCCCTTCCCCTGCTCCAAAGTTGAGAAGGGGG...GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTG
56% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GCAGGGCTGGCCTCACAACAACTCCTCTCCTACATTGTCAGGACAGGGAAGGAGGTGGCTGAGCGCAGCTaGAGCCTAGGTATATACATC +
Preference number: 4 (lower is better)
Translates to: AGLASQQLLSYIVRTGKEVAERS*SLGIYI
Trigger: GATGTATATACCTAGGCTCCAGCTGCGCTCAGCCAC...CTCCTTCCCTGTCCTGACAATGTAGGAGAGGAGTTGTTGTGAGGCCAGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGATGTTAAGACAGGTGTaGCTGAGCGCAGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGEREMLRQV*LSAAGA
Trigger: GGCTCCAGCTGCGCTCAGCCACACCTGTCTTAACAT...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp AGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCCACAGCATGGGTTTCTaGGCTCCTCAGGCTCCGAAT +
Preference number: 4 (lower is better)
Translates to: RLRRWLDVVQVHFQEKGSHSMGF*APQAPN
Trigger: ATTCGGAGCCTGAGGAGCCCAGAAACCCATGCTGTG...GCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GAAGCGGGCTGCCTGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCCAGATAGTGGGATCTaGAATGGACCTCAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: EAGCLESHKYCGSACITAPDSGI*NGPQVG
Trigger: GCCAACCTGAGGTCCATTCCAGATCCCACTATCTGG...GGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCAGGCAGCCCGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GGGGCGCTGGGACTCATGAGTAGCTGCTATACTTTGGGATCTGTCCCCCATCCCGTAGCTGCTATACTTTaGGATCTGTCCCCCATCCCT +
Preference number: 4 (lower is better)
Translates to: GALGLMSSCYTLGSVPHPVAAIL*DLSPIP
Trigger: AGGGATGGGGGACAGATCCCAAAGTATAGCAGCTAC...GGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCATGAGTCCCAGCGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000330495.8
3UTR CAA 72 bp GGAGGGGCGCTGGGACTCATGAGTAGCTGCTATACTTaGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: GGALGLMSSCYT*GSVPHPCVCSV
Trigger: AACACTGCAAACACAGGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCATGAGTCCCAGCGCCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR TCA 90 bp GCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGCTGGGCTCCAGCCTCGTCTaGCTGCCGCTGGTGTTATAT +
Preference number: 4 (lower is better)
Translates to: AGYGHTGLQWKRNKTSRLGSSLV*LPLVLY
Trigger: ATATAACACCAGCGGCAGTCAGACGAGGCTGGAGCC...CAGCCTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCATCCTCTTCTGTTGGCTaGTTGAGATTAGTGTACCAT +
Preference number: 4 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPSSSVG*LRLVYH
Trigger: ATGGTACACTAATCTCAATCAGCCAACAGAAGAGGA...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR TCA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGAGTGGATGGCAGAGACTaGGGAGGTGGCTGGATGTCG +
Preference number: 4 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRVDGRD*GGGWMS
Trigger: CGACATCCAGCCACCTCCTCAGTCTCTGCCATCCAC...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR TCA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGACTGAAATGAGCCAGTaGGACCACACAGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLTEMSQ*DHTGQD
Trigger: GTCCTGTCCTGTGTGGTCTCACTGGCTCATTTCAGT...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACAGACCTCGAGGCTGCTaGCCCACAGCATCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHRPRGC*PTASLC
Trigger: GCAGAGGGATGCTGTGGGTCAGCAGCCTCGAGGTCT...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp ACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCCCTTCTCAATGCTATGTCTaGGGCAGTGGGCCTAGAACA +
Preference number: 4 (lower is better)
Translates to: TWNLRAHCTRWPAQRGPPSQCYV*GSGPRT
Trigger: TGTTCTAGGCCCACTGCCTCAGACATAGCATTGAGA...AGGGGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGAAAGTGGATGTAGAATaGCAGAATCTGGTTAGCATC +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRKVDVE*QNLVSI
Trigger: GATGCTAACCAGATTCTGTCATTCTACATCCACTTT...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp ACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCCCTCAAGGAGCCCTTTTCTaGCACGAATCCAGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: TWNLRAHCTRWPAQRGPPQGALF*HESRKG
Trigger: TCCTTTCCTGGATTCGTGTCAGAAAAGGGCTCCTTG...AGGGGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCTTGCCGGAGCACAGTaGTCAGGAAAAGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGERELAGAQ*SGKVLE
Trigger: CTCAAGGACTTTTCCTGAGCACTGTGCTCCGGCAAG...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp AGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCGTCATGAAGAGCCTCTaGATGGTAGGCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RLRRWLDVVQVHFQEKGSVMKSL*MVGMWL
Trigger: CAGCCACATGCCTACCATGCAGAGGCTCTTCATGAC...GCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp TATCAAAAGAGCATCCAGCTCTCGACTCTGCACAGCTGCCTTCTGGGCCCTGGTGTCATGAAGAGCCTCTaGATGGTAGGCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: YQKSIQLSTLHSCLLGPGVMKSL*MVGMWL
Trigger: CAGCCACATGCCTACCATGCAGAGGCTCTTCATGAC...ACCAGGGCCCAGAAGGCAGCTGTGCAGAGTCGAGAGCTGGATGCTCTTTTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR GCA 90 bp AAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCAAATGGATAGGACTCTaGCCACCGAGTAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KERNCLGESFSQAGVQWRKWIGL*PPSRAE
Trigger: CTCTGCCCTACTCGGTGGGCAGAGTCCTATCCATTT...GCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp GGGAGCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGTGGGCAGGGGCATGCTaGTTTCACACCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GSRIWTHRTSVEKEQDLEWAGAC*FHTIQL
Trigger: GAGCTGGATGGTGTGAAAGCAGCATGCCCCTGCCCA...CTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp AGAAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGTGGGCAGGGGCATGCTaGTTTCACACCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RKERNCLGESFSQAGVQWWAGAC*FHTIQL
Trigger: GAGCTGGATGGTGTGAAAGCAGCATGCCCCTGCCCA...CCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp GCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGCTGTGGGCAGGGGCATGCTaGTTTCACACCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AGYGHTGLQWKRNKTSRLWAGAC*FHTIQL
Trigger: GAGCTGGATGGTGTGAAAGCAGCATGCCCCTGCCCA...CAGCCTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCAGAATGGTTTTCCGGATaGGAATCTGTGAGACTTTCT +
Preference number: 4 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPEWFSG*ESVRLS
Trigger: AGAAAGTCTCACAGATTCGCATCCGGAAAACCATTC...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTTCGACTCTGCACAGCTaGCTTCTGGGCCCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPSTLHS*LLGPGK
Trigger: TTTACCAGGGCCCAGAAGGCAGCTGTGCAGAGTCGA...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR GCA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCAACTTTCATATGGACGTaGAAATCCTGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPTFIWT*KSCVSL
Trigger: CAAGGACACACAGGATTTGCACGTCCATATGAAAGT...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR GCA 90 bp GCAGGGCTGGCCTCACAACAACTCCTCTCCTACATTGTCAGGACAGGGAAGGAGACACTTGAAGCGGGCTaGCTGGAAAGCCACAAATAC +
Preference number: 4 (lower is better)
Translates to: AGLASQQLLSYIVRTGKETLEAG*LESHKY
Trigger: GTATTTGTGGCTTTCCAGGCAGCCCGCTTCAAGTGT...CTCCTTCCCTGTCCTGACAATGTAGGAGAGGAGTTGTTGTGAGGCCAGCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGGTTCCCATCGGCGGCTaGTCCATGCCAGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWVPIGG*SMPVAP
Trigger: GGGAGCCACTGGCATGGAGCAGCCGCCGATGGGAAC...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGACTCACTGCTAGTCTaGAACCTGTCCAGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: AETEEVAGCRSGPFPGERDSLLV*NLSSRS
Trigger: GCTCCTACTGGACAGGTTGCAGACTAGCAGTGAGTC...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp CACTGCAGGAACACATCTCTGGGTCTGAAACATGACCCCGACTCTCTCCCCACACATGTTCCAAACCGCTaGTTCTGGTCCTTCGAGTGC +
Preference number: 4 (lower is better)
Translates to: HCRNTSLGLKHDPDSLPTHVPNR*FWSFEC
Trigger: GCACTCGAAGGACCAGAAGCAGCGGTTTGGAACATG...TGTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGTTCCTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp ATGAGTAGCTGCTATACTTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTAGCAGTGGGTGCGGCTaGGCTTGGCGCTGCGCATAT +
Preference number: 4 (lower is better)
Translates to: MSSCYTLGSVPHPCVCSVSSGCG*AWRCAY
Trigger: ATATGCGCAGCGCCAAGCGCAGCCGCACCCACTGCT...AACACTGCAAACACAGGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGACGTGCATTCATTGGCTaGACCGCGGCCTTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRRAFIG*TAALEA
Trigger: GGCTTCCAAGGCCGCGGTGCAGCCAATGAATGCACG...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432485.1
CDS-3UTR CCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGGATGCTTCATTTAACTaGGTGTTGCCTTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRDASFN*VLPSRF
Trigger: AAATCTGGAAGGCAACACCCAGTTAAATGAAGCATC...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGATGGCTGGGGCCAGTTTaGAGGCAAGGATGGACAGCT +
Preference number: 4 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRWLGPV*RQGWTA
Trigger: AGCTGTCCATCCTTGCCTCCAAACTGGCCCCAGCCA...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGAGGCCCTGTGTAAACTaGGTCATGAAGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGERERPCVN*VMKSLC
Trigger: GCAGAGGCTCTTCATGACCCAGTTTACACAGGGCCT...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp GGGGCGCTGGGACTCATGAGTAGCTGCTATACTTTGGGATCTGTCCCCCATCCCTACCAAGCAAGACTTTaGTACCAAGGCAGGGAATGG +
Preference number: 4 (lower is better)
Translates to: GALGLMSSCYTLGSVPHPYQARL*YQGREW
Trigger: CCATTCCCTGCCTTGGTACCAAAGTCTTGCTTGGTA...GGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCATGAGTCCCAGCGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp CAACAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGAGCTTCCTCCTGTGGATaGCAGAGACTGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QQTWNLRAHCTRWPAQRGASSCG*QRLRRW
Trigger: CCACCTCCTCAGTCTCTGCCATCCACAGGAGGAAGC...TCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp ACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCCCTGCCCTCAAAGAAGGCTaGCTGGGGATTTTTGAGATC +
Preference number: 4 (lower is better)
Translates to: TWNLRAHCTRWPAQRGPPALKEG*LGIFEI
Trigger: GATCTCAAAAATCCCCAGCCAGCCTTCTTTGAGGGC...AGGGGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp CCTCTGCCCACAGACTCCTGCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCCACACAGGACTTCAGTaGAAAAGGAACAAGACCTCG +
Preference number: 4 (lower is better)
Translates to: PLPTDSCRHKPRNSANSSHTGLQ*KRNKTS
Trigger: CGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTG...GCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGCAGGAGTCTGTGGGCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACCGGCCGTGCATTCATTaGCTGCACCGCGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHRPCIH*LHRGLG
Trigger: TCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCG...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp AAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCCAGCCTCCTCCAATATaGATAGCTTCTCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: KERNCLGESFSQAGVQWRQPPPI*IASRMA
Trigger: GGCCATCCGAGAAGCTATCCATATTGGAGGAGGCTG...GCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp TTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACGTCTTTCTCCCAGGCTaGAGTGCAGTGGCGCGACCT +
Preference number: 4 (lower is better)
Translates to: FGICPPSLCLQCFSDHFNVFLPG*SAVARP
Trigger: AGGTCGCGCCACTGCACTCCAGCCTGGGAGAAAGAC...GTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR TCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGAGGGAGGTCCACATGTaGAAGTTCTTTGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGEREREVHM*KFFAGL
Trigger: CAGTCCAGCAAAGAACTTTCACATGTGGACCTCCCT...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTAAAGGCACCATGTATTTaGTCACACCCAGCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLKAPCI*SHPAEE
Trigger: CTCCTCTGCTGGGTGTGATCAAATACATGGTGCCTT...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR TCA 90 bp CAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCCGGTATCTTAGCTTCTaGGTCTTCATGGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: QPDDCSCSSSLAKKVSSSRYLSF*VFMAGA
Trigger: GGCCCCAGCCATGAAGACTCAGAAGCTAAGATACCG...GGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR TCA 90 bp AAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCCTCAGGAAAAGTCCTTaGGGACTCAGTCGTGCAATC +
Preference number: 4 (lower is better)
Translates to: KERNCLGESFSQAGVQWRLRKSP*GLSRAI
Trigger: GATTGCACGACTGAGTCCTCAAGGACTTTTCCTGAG...GCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR TCA 90 bp AGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCGAGCTTGCTGACAGCTaGTTCTGCTACCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: RLRRWLDVVQVHFQEKGSELADS*FCYQAR
Trigger: TCTTGCTTGGTAGCAGAATCAGCTGTCAGCAAGCTC...GCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR TCA 90 bp CAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCAAAGCAGGAGCTTGCTaGCAGCTGATTCTGCTACCA +
Preference number: 4 (lower is better)
Translates to: QTWNLRAHCTRWPAQRGPKAGAC*QLILLP
Trigger: TGGTAGCAGAATCAGCTGTCAGCAAGCTCCTGCTTT...GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGACTGGAACTCAGAGGCTaGAAGCAGGAGCTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRLELRG*KQELAD
Trigger: GTCAGCAAGCTCCTGCTTTCAGCCTCTGAGTTCCAG...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCCTCAACTACTGAAATaGGCCAGTGAGACCACACAG +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGEREPQLLK*ASETTQ
Trigger: CTGTGTGGTCTCACTGGCTCATTTCAGTAGTTGAGG...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR TCA 90 bp TGCTGGTGTCCTGACGATGACTTTTGCATCCCACTCACTAGCCATGGAATGTTACTCTCTCCCCACACTTaGAGCGGGCTGCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: CWCPDDDFCIPLTSHGMLLSPHT*SGLPGK
Trigger: CTTTCCAGGCAGCCCGCTTCAAGTGTGGGGAGAGAG...TAACATTCCATGGCTAGTGAGTGGGATGCAAAAGTCATCGTCAGGACACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTCTGGCTGGGGATTTTTaGGATCCCACTGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPLAGDF*DPTAGT
Trigger: TGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAG...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GAAGCGGGCTGCCTGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCGAGATGAGGTACAGCTaGACTCATGGAGACATGAAG +
Preference number: 4 (lower is better)
Translates to: EAGCLESHKYCGSACITAEMRYS*THGDMK
Trigger: CTTCATGTCTCCATGAGTTCAGCTGTACCTCATCTC...GGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCAGGCAGCCCGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACATCGGGCGCTGGGACTCATaGGTAGCTGCTATACTTTGG +
Preference number: 4 (lower is better)
Translates to: GICPPSLCLQCFSDHFNIGRWDS*VAAILW
Trigger: CCAAAGTATAGCAGCTACTCATGAGTCCCAGCGCCC...GATGTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp TCTCAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCGGGTCTGAGAGATGTTaGTCACGGGATCGCCATCGC +
Preference number: 4 (lower is better)
Translates to: SQQPDDCSCSSSLAKKVSGSERC*SRDRHR
Trigger: GCGATGGCGATCCCGTGAGCAACATCTCTCAGACCC...GGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR GCA 90 bp AAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCTTGCCGGAGCACAGTaGTCAGGAAAAGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: KREKLLRRVFLPGWSAVALAGAQ*SGKVLE
Trigger: CTCAAGGACTTTTCCTGAGCACTGTGCTCCGGCAAG...CGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp CAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGTCTGGACTATGGCAGTaGCTCCATAGTCTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QRLRRWLDVVQVHFQEKGSGLWQ*LHSLGE
Trigger: CTCTCCAAGACTATGGAGGCACTGCCATAGTCCAGA...CCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp AAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCTCTGGACTATGGCAGTaGCTCCATAGTCTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: KERNCLGESFSQAGVQWRSGLWQ*LHSLGE
Trigger: CTCTCCAAGACTATGGAGGCACTGCCATAGTCCAGA...GCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTACAGAAGACCTTGTCTaGTATGGAGGCTGGAGACCG +
Preference number: 4 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPTEDLV*YGGWRP
Trigger: CGGTCTCCAGCCTCCATAGCAGACAAGGTCTTCTGT...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp CTCAGGCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTAAATGGATAGGACTCTaGCCACCGAGTAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LRLRIRQTLHVFTVPPSAKWIGL*PPSRAE
Trigger: CTCTGCCCTACTCGGTGGGCAGAGTCCTATCCATTT...AGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGCAGACAGAAGGACCATaGTGGCTCCAAATGGATAGG +
Preference number: 4 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLQTEGP*WLQMDR
Trigger: CCTATCCATTTGGAGCCAGCATGGTCCTTCTGTCTG...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp AAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCCAGACAGAAGGACCATaGTGGCTCCAAATGGATAGG +
Preference number: 4 (lower is better)
Translates to: KERNCLGESFSQAGVQWRQTEGP*WLQMDR
Trigger: CCTATCCATTTGGAGCCAGCATGGTCCTTCTGTCTG...GCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTACAGACAGAAGGACCATaGTGGCTCCAAATGGATAGG +
Preference number: 4 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLQTEGP*WLQMDR
Trigger: CCTATCCATTTGGAGCCAGCATGGTCCTTCTGTCTG...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGATCGACTCTGCACAGCTaGCTTCTGGGCCCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRSTLHS*LLGPGK
Trigger: TTTACCAGGGCCCAGAAGGCAGCTGTGCAGAGTCGA...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp GGGAGAGGTATTGAGGTGAAACATAGGTCGTGTCTATACAGTCTGGGCAAAGTGTCCAGCTCTCGACTCTaGACAGCTGCCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GRGIEVKHRSCLYSLGKVSSSRL*TAAFWA
Trigger: GGCCCAGAAGGCAGCTGTGCAGAGTCGAGAGCTGGA...CACTTTGCCCAGACTGTATAGACACGACCTATGTTTCACCTCAATACCTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GAAGGCTGGCTGGGGATTTTTGAGATCCCACTGCAGGAACACATCTCTGGGTCTCTGAAGATAGGCTGCTaGTTCCTCCTGTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: EGWLGIFEIPLQEHISGSLKIGC*FLLWMA
Trigger: TGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAG...AGACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGCTGTACGCTCCCTGCTaGTCTTGGCTCAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWLYAPC*SWLSGQ
Trigger: TTGCCCACTGAGCCAAGAGCAGCAGGGAGCGTACAG...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp TGCTGGTGTCCTGACGATGACTTTTGCATCCCACTCACTAGCCATGGAATGTTAGTCCTGTACGCTCCCTaGTGCTCTTGGCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: CWCPDDDFCIPLTSHGMLVLYAP*CSWLSG
Trigger: CCCACTGAGCCAAGAGCAGCAGGGAGCGTACAGGAC...TAACATTCCATGGCTAGTGAGTGGGATGCAAAAGTCATCGTCAGGACACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTACCGCGGCCTTGGATCTaGTGCTCCCGTCCTGTACGC +
Preference number: 4 (lower is better)
Translates to: TKRNFHMDVQILCVLGILPRPWI*CSRPVR
Trigger: GCGTACAGGACGGGAGCAGCAGATCCAAGGCCGCGG...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp ATGAGTAGCTGCTATACTTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTGGCTGCGCTTGGCGCTaGGCATATCCGAATACCAGG +
Preference number: 4 (lower is better)
Translates to: MSSCYTLGSVPHPCVCSVGCAWR*AYPNTR
Trigger: CCTGGTATTCGGATATGCGCAGCGCCAAGCGCAGCC...AACACTGCAAACACAGGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGGGTTTGGTTACCTGGTaGAGAGATGTCTTTTATTTT +
Preference number: 4 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRGLVTW*RDVFYF
Trigger: AAAATAAAAGACATCTCTCCACCAGGTAACCAAACC...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp AGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCACCAGCAGATCCTTTTaGTTGTGGTTTACCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RLRRWLDVVQVHFQEKGSTSRSF*LWFTSP
Trigger: CGGGGAGGTAAACCACAACCAAAAGGATCTGCTGGT...GCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCAGGCTCCTCAAGGGATaGCACGGTGTAGACATCTGC +
Preference number: 4 (lower is better)
Translates to: QPDDCSCSSSLAKKVSSSRLLKG*HGVDIC
Trigger: GCAGATGTCTACACCGTGCCATCCCTTGAGGAGCCT...GGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CCA 90 bp AAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCCTCTGGTCTGGACTATaGCAGTGCCTCCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: KERNCLGESFSQAGVQWRLWSGL*QCLHSL
Trigger: AAGACTATGGAGGCACTGCCATAGTCCAGACCAGAG...GCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp AGAAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCAGAGCAGTCTGCTCTaGTCTGGACTATGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: RKERNCLGESFSQAGVQWQSSLL*SGLWQC
Trigger: GCACTGCCATAGTCCAGACCAGAGCAGACTGCTCTG...CCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp AAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCTGCATGGTAGGCATGTaGCTGGAGAAGCTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: KERNCLGESFSQAGVQWRCMVGM*LEKLRF
Trigger: AAAACGGAGCTTCTCCAGCCACATGCCTACCATGCA...GCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTATGCATGGTAGGCATGTaGCTGGAGAAGCTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLCMVGM*LEKLRF
Trigger: AAAACGGAGCTTCTCCAGCCACATGCCTACCATGCA...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp CAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTGTGGTGCCCAGACTTaGTTGCCGCTTGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: QQPDDCSCSSSLAKKVSSCGAQT*LPLAVR
Trigger: CCTCACTGCAAGCGGCAACCAAGTCTGGGCACCACA...ACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGTCCAATCCACGAACCTaGAACTCAGAGGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: AETEEVAGCRSGPFPGERSNPRT*NSEAES
Trigger: GCTTTCAGCCTCTGAGTTCCAGGTTCGTGGATTGGA...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGCCTGCTCCTCTTCCTTaGCAAAGAAGGTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: AETEEVAGCRSGPFPGERPAPLP*QRRSPV
Trigger: AACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGG...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CCA 90 bp CAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGCCTGCTCCTCTTCCTTaGCAAAGAAGGTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: QRLRRWLDVVQVHFQEKGPAPLP*QRRSPV
Trigger: AACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGG...CCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CCA 90 bp CACTGCAGGAACACATCTCTGGGTCTGAAACATGACCCCGACTCTCTCCCCACATTGAAGCGGGCTGCCTaGAAAGCCACAAATACTGTG +
Preference number: 4 (lower is better)
Translates to: HCRNTSLGLKHDPDSLPTLKRAA*KATNTV
Trigger: CACAGTATTTGTGGCTTTCCAGGCAGCCCGCTTCAA...TGTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGTTCCTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp CTCAGGCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTAGCATCATTCAGAGCTaGTACGGAAGCCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: LRLRIRQTLHVFTVPPSASIIQS*YGSLAL
Trigger: GAGAGCCAGGCTTCCGTACCAGCTCTGAATGATGCT...AGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACTCAATTGAATGGACCTCAGGTTaGCTCTGGAGCCCGTGCCAA +
Preference number: 4 (lower is better)
Translates to: ATNTVGQPVSLPKPLYSIEWTSG*LWSPCQ
Trigger: TTGGCACGGGCTCCAGAGCCAACCTGAGGTCCATTC...AATTGAGTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TCAGCAGTAAAAGTAGAGGACCCTCCTTCACCAGTTTCTAAAAAGGTTGCACCTGCTGCACCGCGGCCTTaGATCTGCTGCTCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SAVKVEDPPSPVSKKVAPAAPRP*ICCSRP
Trigger: AGGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGC...AGGTGCAACCTTTTTAGAAACTGGTGAAGGAGGGTCCTCTACTTTTACTGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACATGGACGGAATTCCAGCCTaGAGACGGAGCGACGGCCGT +
Preference number: 4 (lower is better)
Translates to: LMSYTRSWRWGRDCLKHMDGIPA*RRSDGR
Trigger: ACGGCCGTCGCTCCGTCTCCAGGCTGGAATTCCGTC...CATGTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTTCAAGTGGAACTGGCTaGGTCTCTACTCCAGATGAC +
Preference number: 4 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPSSGTG*VSTPDD
Trigger: GTCATCTGGAGTAGAGACTCAGCCAGTTCCACTTGA...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTCTCCTGGAGTCCTCTTaGAATGCCAGTTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPLLESS*NASFSC
Trigger: GCAAGAGAAACTGGCATTTCAAGAGGACTCCAGGAG...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp AGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCACCCAGTCGTCCCCTCTaGTGCTCTTCGGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLMIVPAPLPWQRRSPVPPSRPL*CSSVSS
Trigger: AGAAGAAACCGAAGAGCATCAGAGGGGACGACTGGG...TGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR TCA 90 bp GCAGGGCTGGCCTCACAACAACTCCTCTCCTACATTGTCAGGACAGGGAAGGAGCATTTAAAATGGGTCTaGGAGATGTTGCTCACGGGA +
Preference number: 4 (lower is better)
Translates to: AGLASQQLLSYIVRTGKEHLKWV*EMLLTG
Trigger: TCCCGTGAGCAACATCTCTCAGACCCATTTTAAATG...CTCCTTCCCTGTCCTGACAATGTAGGAGAGGAGTTGTTGTGAGGCCAGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp AAAAGAGCATCCAGCTCTCGACTCTGCACAGCTGCCTTCTGGGCCCTGGTAAAGTTGAGACCCTCAAACTaGATCGCTTCTCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: KRASSSRLCTAAFWALVKLRPSN*IASQQP
Trigger: AGGCTGTTGAGAAGCGATTCAGTTTGAGGGTCTCAA...CTTTACCAGGGCCCAGAAGGCAGCTGTGCAGAGTCGAGAGCTGGATGCTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR TCA 90 bp GGGGCGCTGGGACTCATGAGTAGCTGCTATACTTTGGGATCTGTCCCCCATCCCCTTAAGGAGTGGTTCTaGCAAGTGCAAACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: GALGLMSSCYTLGSVPHPLKEWF*QVQTCV
Trigger: AACACAAGTTTGCACTTGTCAGAACCACTCCTTAAG...GGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCATGAGTCCCAGCGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp TTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACGTCTTCCCTGAATGTTaGCATCCCAGGGCAACCGTG +
Preference number: 4 (lower is better)
Translates to: FGICPPSLCLQCFSDHFNVFPEC*HPRATV
Trigger: CACGGTTGCCCTGGGATGGCAACATTCAGGGAAGAC...GTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp AGAAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGAAGGACAGAGCAGTCTaGTCTGGTCTGGACTATGGC +
Preference number: 4 (lower is better)
Translates to: RKERNCLGESFSQAGVQWKDRAV*SGLDYG
Trigger: GCCATAGTCCAGACCAGAGCAGACTGCTCTGTCCTT...CCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp GGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACATCGTCATGAAGAGCCTCTaGATGGTAGGCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GICPPSLCLQCFSDHFNIVMKSL*MVGMWL
Trigger: CAGCCACATGCCTACCATGCAGAGGCTCTTCATGAC...GATGTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGCCTGATGATTGTTCCTaGTCCTCTTCCTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: AETEEVAGCRSGPFPGERPDDCS*SSSLAK
Trigger: CTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGG...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR GCA 90 bp GCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGCTGCTGAAGATAGGCTGCTaGTTCCTCCTGTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: AGYGHTGLQWKRNKTSRLLKIGC*FLLWMA
Trigger: TGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAG...CAGCCTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp AGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCTTACTGAAGATAGGCTaGTGCTTCCTCCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: RLRRWLDVVQVHFQEKGSLLKIG*CFLLWM
Trigger: CATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAA...GCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR GCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGCCTGACGATGACTTTTaGATCCCACTCACTAGCCAT +
Preference number: 4 (lower is better)
Translates to: AETEEVAGCRSGPFPGERPDDDF*IPLTSH
Trigger: ATGGCTAGTGAGTGGGATGCAAAAGTCATCGTCAGG...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGTTTCTTCCAGTCCTCTaGTCCCAGTTACCCATGTTC +
Preference number: 4 (lower is better)
Translates to: AETEEVAGCRSGPFPGERFLPVL*SQLPMF
Trigger: GAACATGGGTAACTGGGAGCAGAGGACTGGAAGAAA...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGAATCTGAGAGCACACTaGACTAGATGGCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: AETEEVAGCRSGPFPGERNLRAH*TRWPAQ
Trigger: TTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATT...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp CCTCTGCCCACAGACTCCTGCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCAAACAGAAAAGGAACTaGAGGGGCATCATGTATACC +
Preference number: 4 (lower is better)
Translates to: PLPTDSCRHKPRNSANSSKQKRN*RGIMYT
Trigger: GGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTT...GCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGCAGGAGTCTGTGGGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGGAGACAAGGTACTCCTaGAGTCCTCTTGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGEREETRYS*SPLEMP
Trigger: TGGCATTTCAAGAGGACTCCAGGAGTACCTTGTCTC...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GAAGGCTGGCTGGGGATTTTTGAGATCCCACTGCAGGAACACATCTCTGGGTCTAAGAAAAGGTCCACTTaGGAGGTTGAGACGGGCACT +
Preference number: 4 (lower is better)
Translates to: EGWLGIFEIPLQEHISGSKKRST*EVETGT
Trigger: AGTGCCCGTCTCAACCTCCCAAGTGGACCTTTTCTT...AGACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp AAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCATCCCAGGGCAACCGTaGGACAAGAAGAAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: KERNCLGESFSQAGVQWRIPGQP*DKKKEK
Trigger: CTTTTCTTTCTTCTTGTCCCACGGTTGCCCTGGGAT...GCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTAATCCCAGGGCAACCGTaGGACAAGAAGAAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLIPGQP*DKKKEK
Trigger: CTTTTCTTTCTTCTTGTCCCACGGTTGCCCTGGGAT...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp GGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACATCAGGCCCTGTGTAAACTaGGTCATGAAGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GICPPSLCLQCFSDHFNIRPCVN*VMKSLC
Trigger: GCAGAGGCTCTTCATGACCCAGTTTACACAGGGCCT...GATGTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGTCTTCTTTAACCTTTTaGGTCGAGGAAGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGERESSLTF*VEEGPW
Trigger: CCATGGGCCTTCCTCGACCCAAAAGGTTAAAGAAGA...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp CACTGCAGGAACACATCTCTGGGTCTGAAACATGACCCCGACTCTCTCCCCACATTTTCTGCTCCAGTGTaGCATAGACTGTCAACCTGC +
Preference number: 4 (lower is better)
Translates to: HCRNTSLGLKHDPDSLPTFSAPV*HRLSTC
Trigger: GCAGGTTGACAGTCTATGCCACACTGGAGCAGAAAA...TGTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGTTCCTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGCTGCTCTTGGCTCAGTaGGCAAGGAAGGAGCCACGG +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWLLLAQ*ARKEPR
Trigger: CCGTGGCTCCTTCCTTGCCCACTGAGCCAAGAGCAG...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACAGCCACCCACAAGCTGCACCGCGGCCTTaGAAGCCTCCGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: GYSALLANYLNFGYSHPQAAPRP*KPPWMT
Trigger: GGTCATCCACGGAGGCTTCCAAGGCCGCGGTGCAGC...TTGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432485.1
CDS-3UTR TCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGTTCACCGCATCCAGCTaGGAGATCTTTACTCACATT +
Preference number: 4 (lower is better)
Translates to: AETEEVAGCRSGPFPGERFTASS*EIFTHI
Trigger: AATGTGAGTAAAGATCTCTCAGCTGGATGCGGTGAA...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GAAGGCTGGCTGGGGATTTTTGAGATCCCACTGCAGGAACACATCTCTGGGTCTTATTACTGCCTGAGCTaGCCAGCAGATCCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: EGWLGIFEIPLQEHISGSYYCLS*PADPFG
Trigger: ACCAAAAGGATCTGCTGGTCAGCTCAGGCAGTAATA...AGACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GGGAGCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGCTCAGGAAAAGTCCTTaGGGACTCAGTCGTGCAATC +
Preference number: 4 (lower is better)
Translates to: GSRIWTHRTSVEKEQDLELRKSP*GLSRAI
Trigger: GATTGCACGACTGAGTCCTCAAGGACTTTTCCTGAG...CTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACATCGAGCTTGCTGACAGCTaGTTCTGCTACCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: GICPPSLCLQCFSDHFNIELADS*FCYQAR
Trigger: TCTTGCTTGGTAGCAGAATCAGCTGTCAGCAAGCTC...GATGTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR TCA 90 bp AGACCAGCCCAAGGAGATGCTGAGGCCTCTCACCAAGAATTCAAATCCAATTCACTGGAACTCAGAGGCTaGAAGCAGGAGCTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RPAQGDAEASHQEFKSNSLELRG*KQELAD
Trigger: GTCAGCAAGCTCCTGCTTTCAGCCTCTGAGTTCCAG...TGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGACCTCAACTACTGAAATaGGCCAGTGAGACCACACAG +
Preference number: 4 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRPQLLK*ASETTQ
Trigger: CTGTGTGGTCTCACTGGCTCATTTCAGTAGTTGAGG...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp CTCAGGCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTGAACTCATGGAGACATaGAGCTGGAAAGGAGACCAA +
Preference number: 4 (lower is better)
Translates to: LRLRIRQTLHVFTVPPSAELMET*SWKGDQ
Trigger: TTGGTCTCCTTTCCAGCTTCATGTCTCCATGAGTTC...AGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp ATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACATCTCCGACGAGGGCAACCCATaGGAGATCTTAAGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: ICPPSLCLQCFSDHFNISDEGNP*EILRSG
Trigger: ACCACTCCTTAAGATCTCTCATGGGTTGCCCTCGTC...GGAGATGTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGTATCTCCTGGAAGGCTaGCATTCGTTTCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: AETEEVAGCRSGPFPGERYLLEG*HSFLSH
Trigger: ATGGGAAAGAAACGAATGGCAGCCTTCCAGGAGATA...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp AGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCTTGAGGACTCAGTCGTaGAATCTGAGCTGGATGATT +
Preference number: 4 (lower is better)
Translates to: RLRRWLDVVQVHFQEKGSLRTQS*NLSWMI
Trigger: AATCATCCAGCTCAGATTGCACGACTGAGTCCTCAA...GCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGTTGAGGACTCAGTCGTaGAATCTGAGCTGGATGATT +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGERELRTQS*NLSWMI
Trigger: AATCATCCAGCTCAGATTGCACGACTGAGTCCTCAA...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGAAAGGACAGAGCAGTCTaGTCTGGTCTGGACTATGGC +
Preference number: 4 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRKDRAV*SGLDYG
Trigger: GCCATAGTCCAGACCAGAGCAGACTGCTCTGTCCTT...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp CAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTAAATGGATAGGACTCTaGCCACCGAGTAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QQPDDCSCSSSLAKKVSSKWIGL*PPSRAE
Trigger: CTCTGCCCTACTCGGTGGGCAGAGTCCTATCCATTT...ACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR GCA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGAGACTTGGTTGCCGCTTaGAGTGAGGGGAATGAAGAG +
Preference number: 4 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRDLVAA*SEGNEE
Trigger: CTCTTCATTCCCCTCACTGCAAGCGGCAACCAAGTC...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp ATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACATCTCCGACTTGGTTGCCGCTTaGAGTGAGGGGAATGAAGAG +
Preference number: 4 (lower is better)
Translates to: ICPPSLCLQCFSDHFNISDLVAA*SEGNEE
Trigger: CTCTTCATTCCCCTCACTGCAAGCGGCAACCAAGTC...GGAGATGTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp GCTTTAACAGGAGATGAGGTACAGCTGAACTCATGGAGACATGAAGCTGGAAAGTGTGGCTGCTTGTGGTaGCCAGACTTGGTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: ALTGDEVQLNSWRHEAGKCGCLW*PDLVAA
Trigger: AGCGGCAACCAAGTCTGGGCACCACAAGCAGCCACA...CTTTCCAGCTTCATGTCTCCATGAGTTCAGCTGTACCTCATCTCCTGTTAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGTGTGGCTGCTTGTGGTaGCCAGACTTGGTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWCGCLW*PDLVAA
Trigger: AGCGGCAACCAAGTCTGGGCACCACAAGCAGCCACA...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp TGCTGGTGTCCTGACGATGACTTTTGCATCCCACTCACTAGCCATGGAATGTTACCTGGTAAAGCTGCCTaGCACCTTGACTTTGCCTCG +
Preference number: 4 (lower is better)
Translates to: CWCPDDDFCIPLTSHGMLPGKAA*HLDFAS
Trigger: CGAGGCAAAGTCAAGGTGGCAGGCAGCTTTACCAGG...TAACATTCCATGGCTAGTGAGTGGGATGCAAAAGTCATCGTCAGGACACCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp GGGAGCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGACACTTGAAGCGGGCTaGCTGGAAAGCCACAAATAC +
Preference number: 4 (lower is better)
Translates to: GSRIWTHRTSVEKEQDLETLEAG*LESHKY
Trigger: GTATTTGTGGCTTTCCAGGCAGCCCGCTTCAAGTGT...CTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGTTCTGGTCCTTCGAGTaGCACACCTGTAACAGGCAC +
Preference number: 4 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWFWSFE*HTCNRH
Trigger: GTGCCTGTTACAGGTGTGGCACTCGAAGGACCAGAA...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp CCTCTGCCCACAGACTCCTGCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCCAGGAAAGGATACTCTaGACTTCTGGCCAATTATTT +
Preference number: 4 (lower is better)
Translates to: PLPTDSCRHKPRNSANSSQERIL*TSGQLF
Trigger: AAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTG...GCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGCAGGAGTCTGTGGGCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp ATGAGTAGCTGCTATACTTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTCCGAATACCAGGAAGTaGCCGGTTTCGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: MSSCYTLGSVPHPCVCSVPNTRK*PVSLSV
Trigger: CACTGACAGCGAAACCGGGCACTTCCTGGTATTCGG...AACACTGCAAACACAGGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp ACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCCCTTTCTTACAAGTTCGATaGGGCTGCTTCTTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: TWNLRAHCTRWPAQRGPPFLQVR*GCFFKG
Trigger: TCCCTTAAAGAAGCAGCCCCATCGAACTTGTAAGAA...AGGGGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp AGACCAGCCCAAGGAGATGCTGAGGCCTCTCACCAAGAATTCAAATCCAATTCAGCTTCTGAGTCTTCATaGCTGGGGCCAGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RPAQGDAEASHQEFKSNSASESS*LGPVWR
Trigger: CCTCCAAACTGGCCCCAGCCATGAAGACTCAGAAGC...TGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGACTAGCTGCCAAATATaGATTCAGCTGCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: AETEEVAGCRSGPFPGERTSCQI*IQLLCA
Trigger: AGCACAGAGCAGCTGAATCCATATTTGGCAGCTAGT...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp TGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACTGCATGGTAGGCATGTaGCTGGAGAAGCTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: WKATNTVGQPVSLPKPLYCMVGM*LEKLRF
Trigger: AAAACGGAGCTTCTCCAGCCACATGCCTACCATGCA...GTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTAGACCTTGTCTGCTATaGAGGCTGGAGACCGTAACC +
Preference number: 4 (lower is better)
Translates to: QQPDDCSCSSSLAKKVSSRPCLL*RLETVT
Trigger: GGTTACGGTCTCCAGCCTCCATAGCAGACAAGGTCT...ACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CCA 90 bp AGACCAGCCCAAGGAGATGCTGAGGCCTCTCACCAAGAATTCAAATCCAATTCACATGCTGGCTCCAAATaGATAGGACTCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: RPAQGDAEASHQEFKSNSHAGSK*IGLCPP
Trigger: CGGTGGGCAGAGTCCTATCCATTTGGAGCCAGCATG...TGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCTGTGCATTTTTGAGTaGTTTGGCGGTAGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGERELCIFE*FGGRAK
Trigger: TTTTGCCCTACCGCCAAACCACTCAAAAATGCACAG...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CCA 90 bp CTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACATGGCAACTTACTTCGAATaGGGCCTGGACGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LMSYTRSWRWGRDCLKHMATYFE*GLDGLL
Trigger: GAGGAGCCCGTCCAGGCCCCATTCGAAGTAAGTTGC...CATGTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGCATGCAGCGATCAACTaGGTCAAATGCCTATCATGT +
Preference number: 4 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLHAAIN*VKCLSC
Trigger: ACATGATAGGCATTTGACCCAGTTGATCGCTGCATG...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp GAAGGCTGGCTGGGGATTTTTGAGATCCCACTGCAGGAACACATCTCTGGGTCTAGTTACACTAGAAGCTaGAGATGGGGAAGGGATTGC +
Preference number: 4 (lower is better)
Translates to: EGWLGIFEIPLQEHISGSSYTRS*RWGRDC
Trigger: GCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACT...AGACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTCACACAGGACTTCAGTaGAAAAGGAACAAGACCTCG +
Preference number: 4 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPHTGLQ*KRNKTS
Trigger: CGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTG...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAACGACGGGCAGGGCTaGCCTCACAACAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWNDGQG*PHNNSS
Trigger: AGAGGAGTTGTTGTGAGGCCAGCCCTGCCCGTCGTT...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GTCACAAACTACCAAACAGAAAAGGAACTGCAGGGGCATCATGTATACCAATGTGACGGAATTCCAGCCTaGAGACGGAGCGACGGCCGT +
Preference number: 4 (lower is better)
Translates to: VTNYQTEKELQGHHVYQCDGIPA*RRSDGR
Trigger: ACGGCCGTCGCTCCGTCTCCAGGCTGGAATTCCGTC...ACATTGGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTTGGTAGTTTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGTCCTTCCTTAATGGATaGTGTAACCTTTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGERESFLNG*CNLSSF
Trigger: GAAGGAGGAAAGGTTACATCATCCATTAAGGAAGGA...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR TCA 90 bp AGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATCTGCTTTGGTATGTaGCTAACCAAGCTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: RLRRWLDVVQVHFQEKGSICFGM*LTKLLV
Trigger: TACCAAGAGCTTGGTTAGTCACATACCAAAGCAGAT...GCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR TCA 90 bp AAAGTCAGAGAGAAGCATTTAGTGTCTAAGAACCCTGTCCCAGGAAGGGAGAGGCTGCTCTGTGCTGGATaGAAATCCGTCCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: KVREKHLVSKNPVPGRERLLCAG*KSVQES
Trigger: AGACTCCTGGACGGATTTTCATCCAGCACAGAGCAG...CCTCTCCCTTCCTGGGACAGGGTTCTTAGACACTAAATGCTTCTCTCTGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp CAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTGAGCTTGCTGACAGCTaGTTCTGCTACCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: QQPDDCSCSSSLAKKVSSELADS*FCYQAR
Trigger: TCTTGCTTGGTAGCAGAATCAGCTGTCAGCAAGCTC...ACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR TCA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGAAAAGCAGGAGCTTGCTaGCAGCTGATTCTGCTACCA +
Preference number: 4 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRKAGAC*QLILLP
Trigger: TGGTAGCAGAATCAGCTGTCAGCAAGCTCCTGCTTT...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR TCA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGCCGGATGCGAATCTGTaGGACTTTCTTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWPDANL*DFLWPL
Trigger: AAGAGGCCAAAGAAAGTCTCACAGATTCGCATCCGG...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTAGGGACTGTAAAATCCTaGAATTCTAGAACTCGCTTC +
Preference number: 4 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLGTVKS*NSRTRF
Trigger: GAAGCGAGTTCTAGAATTTCAGGATTTTACAGTCCC...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR TCA 90 bp GCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGCTGGAAAGGGAGCATTCCTaGGGTTCTATACTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: AGYGHTGLQWKRNKTSRLEREHS*GSILSS
Trigger: ACTGCTGAGTATAGAACCTCAGGAATGCTCCCTTTC...CAGCCTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp TCAGCAGTAAAAGTAGAGGACCCTCCTTCACCAGTTTCTAAAAAGGTTGCACCTTCTGGGTCTGAAACATaGCCCCGACTCTCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: SAVKVEDPPSPVSKKVAPSGSET*PRLSPH
Trigger: GTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGA...AGGTGCAACCTTTTTAGAAACTGGTGAAGGAGGGTCCTCTACTTTTACTGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAATGTCCCTAGAACTCTaGCGGTTCCCATCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: TKRNFHMDVQILCVLGILMSLEL*RFPSAA
Trigger: AGCCGCCGATGGGAACCGTCAGAGTTCTAGGGACAT...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GGGAGAGGTATTGAGGTGAAACATAGGTCGTGTCTATACAGTCTGGGCAAAGTGGCTCTTGAGGAGCGCTaGGTTTTGGGATTCACAGCA +
Preference number: 4 (lower is better)
Translates to: GRGIEVKHRSCLYSLGKVALEER*VLGFTA
Trigger: TGCTGTGAATCCCAAAACTCAGCGCTCCTCAAGAGC...CACTTTGCCCAGACTGTATAGACACGACCTATGTTTCACCTCAATACCTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp CAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCAACAAACATGGAATCTaGGAGCACACTGCACTAGAT +
Preference number: 4 (lower is better)
Translates to: QTWNLRAHCTRWPAQRGPNKHGI*EHTALD
Trigger: ATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTT...GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACAGCCCAAGGAGATGCTaGGGCCTCTCACCAAGAATT +
Preference number: 4 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHSPRRC*GLSPRI
Trigger: AATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCT...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGGCTCTCGCTTCTCTTTaGCCTATCCAAGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWALASL*PIQDPR
Trigger: TCTGGGATCTTGGATAGGGCAAAGAGAAGCGAGAGC...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGCTGATGTGGATCTTCCTTTaGTCCCTCAGAGGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: AGYGHTGLQWKRNKTSRLMWIFL*SLRGFS
Trigger: AGAGAACCCTCTGAGGGAGCAAAGGAAGATCCACAT...CAGCCTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp CCTCTGCCCACAGACTCCTGCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCCAAAGGTACTTTCTTTaGCAAACTCAGAGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: PLPTDSCRHKPRNSANSSQRYFL*QTQSLV
Trigger: AACCAAACTCTGAGTTTGGCAAAGAAAGTACCTTTG...GCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGCAGGAGTCTGTGGGCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp CTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACATGGTCTTCCCTGAATGTTaGCATCCCAGGGCAACCGTG +
Preference number: 4 (lower is better)
Translates to: LMSYTRSWRWGRDCLKHMVFPEC*HPRATV
Trigger: CACGGTTGCCCTGGGATGGCAACATTCAGGGAAGAC...CATGTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp TCTCAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCTCTGGACTATGGCAGTaGCTCCATAGTCTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SQQPDDCSCSSSLAKKVSSGLWQ*LHSLGE
Trigger: CTCTCCAAGACTATGGAGGCACTGCCATAGTCCAGA...GGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR GCA 90 bp ATCCAATTCAGCACCAGAGAGGGGCTTGTGAAGACACACAATCAACAAACATGGTCGACTCTGCACAGCTaGCTTCTGGGCCCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: IQFSTREGLVKTHNQQTWSTLHS*LLGPGK
Trigger: TTTACCAGGGCCCAGAAGGCAGCTGTGCAGAGTCGA...CCATGTTTGTTGATTGTGTGTCTTCACAAGCCCCTCTCTGGTGCTGAATTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp GCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAATCCAGCTCTCGACTCTaGACAGCTGCCTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: APLPWQRRSPVPLVSVSKSSSRL*TAAFWA
Trigger: GGCCCAGAAGGCAGCTGTGCAGAGTCGAGAGCTGGA...TTTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR GCA 90 bp CCTCTGCCCACAGACTCCTGCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCAAAATTCATGGACTGTaGATTTTTGAGTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: PLPTDSCRHKPRNSANSSKIHGL*IFEWFG
Trigger: GCCAAACCACTCAAAAATGCACAGTCCATGAATTTT...GCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGCAGGAGTCTGTGGGCAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGAAAATGTCTCTTCCATaGAGCGATCAACTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: AETEEVAGCRSGPFPGERKMSLP*SDQLGQ
Trigger: TTGACCCAGTTGATCGCTGCATGGAAGAGACATTTT...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGGTCAGCCTGTATCACTaGCCAAGCCGTTGTACTCAA +
Preference number: 4 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWVSLYH*PSRCTQ
Trigger: TTGAGTACAACGGCTTGGGCAGTGATACAGGCTGAC...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGAGTCAGCCTGTATCACTaGCCAAGCCGTTGTACTCAA +
Preference number: 4 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRVSLYH*PSRCTQ
Trigger: TTGAGTACAACGGCTTGGGCAGTGATACAGGCTGAC...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATAGACTGTCAACCTaGAAAAGCAAGGCACATAGA +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGEREHRLST*KSKAHR
Trigger: TCTATGTGCCTTGCTTTTGCAGGTTGACAGTCTATG...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp AGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCCATAGACTGTCAACCTaGAAAAGCAAGGCACATAGA +
Preference number: 4 (lower is better)
Translates to: RLRRWLDVVQVHFQEKGSHRLST*KSKAHR
Trigger: TCTATGTGCCTTGCTTTTGCAGGTTGACAGTCTATG...GCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCTGGGCAGGTGGTGTaGCAGCAGCCGATTACCATG +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLESGQVV*QQPITM
Trigger: CATGGTAATCGGCTGCTGGCACACCACCTGCCCAGA...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp TCAGCAGTAAAAGTAGAGGACCCTCCTTCACCAGTTTCTAAAAAGGTTGCACCTCGTGCATTCATTGGCTaGACCGCGGCCTTGGATCTG +
Preference number: 4 (lower is better)
Translates to: SAVKVEDPPSPVSKKVAPRAFIG*TAALDL
Trigger: CAGATCCAAGGCCGCGGTGCAGCCAATGAATGCACG...AGGTGCAACCTTTTTAGAAACTGGTGAAGGAGGGTCCTCTACTTTTACTGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp ACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCCCTCAGGAAAGGATACTCTaGACTTCTGGCCAATTATTT +
Preference number: 4 (lower is better)
Translates to: TWNLRAHCTRWPAQRGPPQERIL*TSGQLF
Trigger: AAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTG...AGGGGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp AAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGGGACTCATGAGTAGCTaGTATACTTTGGGATCTGTC +
Preference number: 4 (lower is better)
Translates to: KREKLLRRVFLPGWSAVAGLMSS*YTLGSV
Trigger: GACAGATCCCAAAGTATAGCAGCTACTCATGAGTCC...CGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp TGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACGTGACAGTCTCTCTCTaGTCACTACTTAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: WKATNTVGQPVSLPKPLYVTVSL*SLLSIS
Trigger: GGAGATGCTAAGTAGTGACCAGAGAGAGACTGTCAC...GTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TATCAAAAGAGCATCCAGCTCTCGACTCTGCACAGCTGCCTTCTGGGCCCTGGTTTCTTACAAGTTCGATaGGGCTGCTTCTTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: YQKSIQLSTLHSCLLGPGFLQVR*GCFFKG
Trigger: TCCCTTAAAGAAGCAGCCCCATCGAACTTGTAAGAA...ACCAGGGCCCAGAAGGCAGCTGTGCAGAGTCGAGAGCTGGATGCTCTTTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTATCGTGCAATCTGAGCTaGATGATTTCACATGAAAGG +
Preference number: 4 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLSCNLS*MISHER
Trigger: CCTTTCATGTGAAATCATCCAGCTCAGATTGCACGA...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp TTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACAAGAAAAGGTCCACTTaGGAGGTTGAGACGGGCACT +
Preference number: 4 (lower is better)
Translates to: FGICPPSLCLQCFSDHFNKKRST*EVETGT
Trigger: AGTGCCCGTCTCAACCTCCCAAGTGGACCTTTTCTT...GTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp ATCCAATTCAGCACCAGAGAGGGGCTTGTGAAGACACACAATCAACAAACATGGCAGAGCAGTCTGCTCTaGTCTGGACTATGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: IQFSTREGLVKTHNQQTWQSSLL*SGLWQC
Trigger: GCACTGCCATAGTCCAGACCAGAGCAGACTGCTCTG...CCATGTTTGTTGATTGTGTGTCTTCACAAGCCCCTCTCTGGTGCTGAATTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GGGAGAGGTATTGAGGTGAAACATAGGTCGTGTCTATACAGTCTGGGCAAAGTGAGACCTTGTCTGCTATaGAGGCTGGAGACCGTAACC +
Preference number: 4 (lower is better)
Translates to: GRGIEVKHRSCLYSLGKVRPCLL*RLETVT
Trigger: GGTTACGGTCTCCAGCCTCCATAGCAGACAAGGTCT...CACTTTGCCCAGACTGTATAGACACGACCTATGTTTCACCTCAATACCTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACATCACAGAAGGACCATGCTaGCTCCAAATGGATAGGACT +
Preference number: 4 (lower is better)
Translates to: GICPPSLCLQCFSDHFNITEGPC*LQMDRT
Trigger: AGTCCTATCCATTTGGAGCCAGCATGGTCCTTCTGT...GATGTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp TTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACGCACATATGGTAACATaGTGTGGCTGCTTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: FGICPPSLCLQCFSDHFNAHMVT*CGCLWC
Trigger: GCACCACAAGCAGCCACACCATGTTACCATATGTGC...GTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGAGCACATATGGTAACATaGTGTGGCTGCTTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRAHMVT*CGCLWC
Trigger: GCACCACAAGCAGCCACACCATGTTACCATATGTGC...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp GCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTACTGTTACCAAGCAAGACTTTaGTACCAAGGCAGGGAATGG +
Preference number: 4 (lower is better)
Translates to: APNKANATCLHRTSLSYCYQARL*YQGREW
Trigger: CCATTCCCTGCCTTGGTACCAAAGTCTTGCTTGGTA...ACAGTAGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CTCAGGCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTGGTAAGATTAGGATCTaGCCTAGGAATGGTTTTCCG +
Preference number: 4 (lower is better)
Translates to: LRLRIRQTLHVFTVPPSAGKIRI*PRNGFP
Trigger: CGGAAAACCATTCCTAGGCCAGATCCTAATCTTACC...AGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp AAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGGGTAAGATTAGGATCTaGCCTAGGAATGGTTTTCCG +
Preference number: 4 (lower is better)
Translates to: KREKLLRRVFLPGWSAVAGKIRI*PRNGFP
Trigger: CGGAAAACCATTCCTAGGCCAGATCCTAATCTTACC...CGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp AGAAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGTCTTCTTTAACCTTTTaGGTCGAGGAAGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: RKERNCLGESFSQAGVQWSSLTF*VEEGPW
Trigger: CCATGGGCCTTCCTCGACCCAAAAGGTTAAAGAAGA...CCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTACCATCCACTAGCAAATaGGGAAGCAAAAGAAACCTA +
Preference number: 4 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLPSTSK*GSKRNL
Trigger: TAGGTTTCTTTTGCTTCCCCATTTGCTAGTGGATGG...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp AGACCAGCCCAAGGAGATGCTGAGGCCTCTCACCAAGAATTCAAATCCAATTCAAACTGTATTTGGCCATaGCCTTGGAAGCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: RPAQGDAEASHQEFKSNSNCIWP*PWKPPW
Trigger: CCACGGAGGCTTCCAAGGCCATGGCCAAATACAGTT...TGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGCTGAGGAGCGCTGAGTTTTaGGATTCACAGCATGGGTTT +
Preference number: 4 (lower is better)
Translates to: AGYGHTGLQWKRNKTSRLRSAEF*DSQHGF
Trigger: AAACCCATGCTGTGAATCCCAAAACTCAGCGCTCCT...CAGCCTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGAGGCAATGCCCTATTCTaGCTTAAAAGAGAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRGNALF*LKRELE
Trigger: CTCAAGCTCTCTTTTAAGTCAGAATAGGGCATTGCC...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GGGAGCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGGGAAATCTGAATCCTaGCCAGTTGTTCCTGTATGT +
Preference number: 4 (lower is better)
Translates to: GSRIWTHRTSVEKEQDLEGKSES*PVVPVC
Trigger: ACATACAGGAACAACTGGTCAGGATTCAGATTTCCC...CTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp TGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACAGTAACTGGGAAATCTaGATCCTGACCAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: WKATNTVGQPVSLPKPLYSNWEI*ILTSCS
Trigger: GGAACAACTGGTCAGGATTCAGATTTCCCAGTTACT...GTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGAGACATCGACTCTTTTaGGGAAATTCCAAAGGTACT +
Preference number: 4 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLRHRLF*GNSKGT
Trigger: AGTACCTTTGGAATTTCCTCAAAAGAGTCGATGTCT...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTACCCAGTCGTCCCCTCTaGTGCTCTTCGGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TKRNFHMDVQILCVLGILPSRPL*CSSVSS
Trigger: AGAAGAAACCGAAGAGCATCAGAGGGGACGACTGGG...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR TCA 90 bp TGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACACAGAGTACACAAACTaGGAAGTCTGTGCGCTTTTG +
Preference number: 4 (lower is better)
Translates to: WKATNTVGQPVSLPKPLYTEYTN*EVCALL
Trigger: CAAAAGCGCACAGACTTCTCAGTTTGTGTACTCTGT...GTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACGAGCTTGCTGACAGCTaGTTCTGCTACCAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHELADS*FCYQAR
Trigger: TCTTGCTTGGTAGCAGAATCAGCTGTCAGCAAGCTC...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp ATGAGTAGCTGCTATACTTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTAAAGCAGGAGCTTGCTaGCAGCTGATTCTGCTACCA +
Preference number: 4 (lower is better)
Translates to: MSSCYTLGSVPHPCVCSVKAGAC*QLILLP
Trigger: TGGTAGCAGAATCAGCTGTCAGCAAGCTCCTGCTTT...AACACTGCAAACACAGGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR TCA 90 bp ATGAGTAGCTGCTATACTTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTCCGGATGCGAATCTGTaGGACTTTCTTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: MSSCYTLGSVPHPCVCSVPDANL*DFLWPL
Trigger: AAGAGGCCAAAGAAAGTCTCACAGATTCGCATCCGG...AACACTGCAAACACAGGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR TCA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTGGGACTGTAAAATCCTaGAATTCTAGAACTCGCTTC +
Preference number: 4 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPGTVKS*NSRTRF
Trigger: GAAGCGAGTTCTAGAATTTCAGGATTTTACAGTCCC...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR TCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGACTGAAATGAGCCAGTaGGACCACACAGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWTEMSQ*DHTGQD
Trigger: GTCCTGTCCTGTGTGGTCTCACTGGCTCATTTCAGT...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR TCA 90 bp TGCTGGTGTCCTGACGATGACTTTTGCATCCCACTCACTAGCCATGGAATGTTAGAGGATATGAAGAGGTaGTGCTGGTGTCCTGACGAT +
Preference number: 4 (lower is better)
Translates to: CWCPDDDFCIPLTSHGMLEDMKR*CWCPDD
Trigger: ATCGTCAGGACACCAGCATCACCTCTTCATATCCTC...TAACATTCCATGGCTAGTGAGTGGGATGCAAAAGTCATCGTCAGGACACCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGATGTCCCTAGAACTCTaGCGGTTCCCATCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: FHMDVQILCVLGILVLLKMSLEL*RFPSAA
Trigger: AGCCGCCGATGGGAACCGTCAGAGTTCTAGGGACAT...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGTGTGACAAAGTATCATaGTTTTCACAGCTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: AETEEVAGCRSGPFPGERCDKVS*FSQLLR
Trigger: CCTCAAGAGCTGTGAAAATCATGATACTTTGTCACA...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp ATCCAATTCAGCACCAGAGAGGGGCTTGTGAAGACACACAATCAACAAACATGGAGCCCAAGGAGATGCTaGGGCCTCTCACCAAGAATT +
Preference number: 4 (lower is better)
Translates to: IQFSTREGLVKTHNQQTWSPRRC*GLSPRI
Trigger: AATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCT...CCATGTTTGTTGATTGTGTGTCTTCACAAGCCCCTCTCTGGTGCTGAATTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp GAAGGCTGGCTGGGGATTTTTGAGATCCCACTGCAGGAACACATCTCTGGGTCTCATGTGAAAGTTCTTTaGTGGACTGCATCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: EGWLGIFEIPLQEHISGSHVKVL*WTASGD
Trigger: ATCTCCTGATGCAGTCCAGCAAAGAACTTTCACATG...AGACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGCTGAATGCCAGTTTCTCTTaGCTTGCACCACAATCCAGT +
Preference number: 4 (lower is better)
Translates to: AGYGHTGLQWKRNKTSRLNASFS*LAPQSS
Trigger: ACTGGATTGTGGTGCAAGGCAAGAGAAACTGGCATT...CAGCCTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GTCACAAACTACCAAACAGAAAAGGAACTGCAGGGGCATCATGTATACCAATGTGGGTCTGAGAGATGTTaGTCACGGGATCGCCATCGC +
Preference number: 4 (lower is better)
Translates to: VTNYQTEKELQGHHVYQCGSERC*SRDRHR
Trigger: GCGATGGCGATCCCGTGAGCAACATCTCTCAGACCC...ACATTGGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTTGGTAGTTTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp ACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCCCTAAATATGGATTCAGCTaGTCTGTGCTGGATGAAAAT +
Preference number: 4 (lower is better)
Translates to: TWNLRAHCTRWPAQRGPPKYGFS*SVLDEN
Trigger: ATTTTCATCCAGCACAGAGCAGCTGAATCCATATTT...AGGGGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGAATCCCATCCACTAGCTaGCAAATATGGATTCAGCTG +
Preference number: 4 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRIPSTS*QIWIQL
Trigger: CAGCTGAATCCATATTTGGCAGCTAGTGGATGGGAT...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp TCAGCAGTAAAAGTAGAGGACCCTCCTTCACCAGTTTCTAAAAAGGTTGCACCTGTCTTCCCTGAATGTTaGCATCCCAGGGCAACCGTG +
Preference number: 4 (lower is better)
Translates to: SAVKVEDPPSPVSKKVAPVFPEC*HPRATV
Trigger: CACGGTTGCCCTGGGATGGCAACATTCAGGGAAGAC...AGGTGCAACCTTTTTAGAAACTGGTGAAGGAGGGTCCTCTACTTTTACTGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGACAGAAGACCTTGTCTaGTATGGAGGCTGGAGACCG +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWTEDLV*YGGWRP
Trigger: CGGTCTCCAGCCTCCATAGCAGACAAGGTCTTCTGT...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp GCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAATGGGCAGGGGCATGCTaGTTTCACACCATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: APLPWQRRSPVPLVSVSKWAGAC*FHTIQL
Trigger: GAGCTGGATGGTGTGAAAGCAGCATGCCCCTGCCCA...TTTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR GCA 90 bp TCTCAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCCCTGATGATTGTTCCTaGTCCTCTTCCTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SQQPDDCSCSSSLAKKVSPDDCS*SSSLAK
Trigger: CTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGG...GGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR GCA 90 bp GCAGGGCTGGCCTCACAACAACTCCTCTCCTACATTGTCAGGACAGGGAAGGAGCACAACATTAAAAAGTaGAACTTACTTCGAATGGGG +
Preference number: 4 (lower is better)
Translates to: AGLASQQLLSYIVRTGKEHNIKK*NLLRMG
Trigger: CCCCATTCGAAGTAAGTTGCACTTTTTAATGTTGTG...CTCCTTCCCTGTCCTGACAATGTAGGAGAGGAGTTGTTGTGAGGCCAGCCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp CAACAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGATTTTTGAGATCCCACTaGAGGAACACATCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: QQTWNLRAHCTRWPAQRGFLRSH*RNTSLG
Trigger: ACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAA...TCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGGGAGAAAAGTATCACTaGCTAAAAGTTGGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGEREGEKYH*LKVGLS
Trigger: CGAAAGACCAACTTTTAGGCAGTGATACTTTTCTCC...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp AAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCATCCAGGTCCCTGTTTaGAGGAGGAGATTTATAATT +
Preference number: 4 (lower is better)
Translates to: KERNCLGESFSQAGVQWRIQVPV*RRRFII
Trigger: AATTATAAATCTCCTCCTGCAAACAGGGACCTGGAT...GCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGAGGAATCAAGTGGAACTaGCTGAGTCTCTACTCCAGA +
Preference number: 4 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRGIKWN*LSLYSR
Trigger: TCTGGAGTAGAGACTCAGCCAGTTCCACTTGATTCC...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CAACAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGATCCAGGTTTTACATCTaGAATCACACTTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QQTWNLRAHCTRWPAQRGSRFYI*NHTWLR
Trigger: CCTGAGCCAAGTGTGATTCCAGATGTAAAACCTGGA...TCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCCTAAGGATATTGTTCTaGATTCTGGACCAGACAAGT +
Preference number: 4 (lower is better)
Translates to: QTWNLRAHCTRWPAQRGPLRILF*ILDQTS
Trigger: ACTTGTCTGGTCCAGAATCCAGAACAATATCCTTAG...GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCGAGTGTCCACCAGGATaGCTCATATTAGTAAAAGTT +
Preference number: 4 (lower is better)
Translates to: QTWNLRAHCTRWPAQRGPECPPG*LILVKV
Trigger: AACTTTTACTAATATGAGCCATCCTGGTGGACACTC...GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACACTAGCTGCCAAATATaGATTCAGCTGCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: WKATNTVGQPVSLPKPLYTSCQI*IQLLCA
Trigger: AGCACAGAGCAGCTGAATCCATATTTGGCAGCTAGT...GTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TCAGCAGTAAAAGTAGAGGACCCTCCTTCACCAGTTTCTAAAAAGGTTGCACCTCATGCTGGCTCCAAATaGATAGGACTCTGCCCACCG +
Preference number: 4 (lower is better)
Translates to: SAVKVEDPPSPVSKKVAPHAGSK*IGLCPP
Trigger: CGGTGGGCAGAGTCCTATCCATTTGGAGCCAGCATG...AGGTGCAACCTTTTTAGAAACTGGTGAAGGAGGGTCCTCTACTTTTACTGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGACAGAAGGACCATGCTaGCTCCAAATGGATAGGACT +
Preference number: 4 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWTEGPC*LQMDRT
Trigger: AGTCCTATCCATTTGGAGCCAGCATGGTCCTTCTGT...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACTCCAATCCACGAACCTaGAACTCAGAGGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHSNPRT*NSEAES
Trigger: GCTTTCAGCCTCTGAGTTCCAGGTTCGTGGATTGGA...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp TCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAAGAGCATCCGCTTCCTCCTGTGGATaGCAGAGACTGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLAKKVSSSISFCIKRASASSCG*QRLRRW
Trigger: CCACCTCCTCAGTCTCTGCCATCCACAGGAGGAAGC...GGATGCTCTTTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAATTTGGCCATGGCCTTaGAAGCCTCCGTGGATGACC +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLEIWPWP*KPPWMT
Trigger: GGTCATCCACGGAGGCTTCCAAGGCCATGGCCAAAT...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp TGTTACCTAACACCATTTCAGATAAAAACCATTAAGACCACACCCAACCATAGTCAAATGATTCACCCCTaGGACCTCCTCCGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: CYLTPFQIKTIKTTPNHSQMIHP*DLLRGP
Trigger: CGGGCCGCGGAGGAGGTCTCAGGGGTGAATCATTTG...ACTATGGTTGGGTGTGGTCTTAATGGTTTTTATCTGAAATGGTGTTAGGTAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTACAGACAAGTCTGATGTaGAACATGAAACTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLQTSLM*NMKLQN
Trigger: ATTCTGAAGTTTCATGTTTCACATCAGACTTGTCTG...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGCTAGGCTTACTGGTTTaGTGTTTAAGGTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWLGLLV*CLRWDS
Trigger: ACTGTCCCACCTTAAACATCAAACCAGTAAGCCTAG...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GGGAGCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGCACAACCAGACATCTTaGCAAAGGCTCCTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GSRIWTHRTSVEKEQDLEHNQTS*QRLLSN
Trigger: ATTTGAAAGGAGCCTTTGTCAAGATGTCTGGTTGTG...CTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAACTGCTCTGTGCTGGATaGAAATCCGTCCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLELLCAG*KSVQES
Trigger: AGACTCCTGGACGGATTTTCATCCAGCACAGAGCAG...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR TCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGCTCAGGAAAAGTCCTTaGGGACTCAGTCGTGCAATC +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWLRKSP*GLSRAI
Trigger: GATTGCACGACTGAGTCCTCAAGGACTTTTCCTGAG...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR TCA 90 bp TGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACTCCTCTTCTGTTGGCTaGTTGAGATTAGTGTACCAT +
Preference number: 4 (lower is better)
Translates to: WKATNTVGQPVSLPKPLYSSSVG*LRLVYH
Trigger: ATGGTACACTAATCTCAATCAGCCAACAGAAGAGGA...GTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp AGACCAGCCCAAGGAGATGCTGAGGCCTCTCACCAAGAATTCAAATCCAATTCAGAAAGGGAGCATTCCTaGGGTTCTATACTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: RPAQGDAEASHQEFKSNSEREHS*GSILSS
Trigger: ACTGCTGAGTATAGAACCTCAGGAATGCTCCCTTTC...TGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAACTGAAATGAGCCAGTaGGACCACACAGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLETEMSQ*DHTGQD
Trigger: GTCCTGTCCTGTGTGGTCTCACTGGCTCATTTCAGT...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR TCA 90 bp GAAGGCTGGCTGGGGATTTTTGAGATCCCACTGCAGGAACACATCTCTGGGTCTATAGTAGTTTTTCAATaGTCGGGAGAGAAACCTGCT +
Preference number: 4 (lower is better)
Translates to: EGWLGIFEIPLQEHISGSIVVFQ*SGEKPA
Trigger: AGCAGGTTTCTCTCCCGATCATTGAAAAACTACTAT...AGACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAACACATCTCTGGGTCTaGAACATGACCCCGACTCTC +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLETHLWV*NMTPTL
Trigger: GAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGT...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGCAAACAGGGCTCTGTTaGCTCACTGCTAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWQTGLC*LTASLQ
Trigger: TTGCAGACTAGCAGTGAGTCAACAGAGCCCTGTTTG...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp CTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACATGATCCAAGATCCCAGATaGCACAGAACCTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LMSYTRSWRWGRDCLKHMIQDPR*HRTSCC
Trigger: ACAGCAGGAGGTTCTGTGGCATCTGGGATCTTGGAT...CATGTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGATTGGTGATTGTCATCTaGTTCACAGACCAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRLVIVI*FTDQVW
Trigger: CCAAACCTGGTCTGTGAAGCAGATGACAATCACCAA...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp CTCAGGCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTAACAGAGCAGTACCTTaGTTGGGTTTTAATACCTCA +
Preference number: 4 (lower is better)
Translates to: LRLRIRQTLHVFTVPPSANRAVP*LGFNTS
Trigger: TGAGGTATTAAAACCCAAGCAAGGTACTGCTCTGTT...AGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGGTCCAGCACACCTTCTaGAAGCTTATTACTACAGTC +
Preference number: 4 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWVQHTF*KLITTV
Trigger: GACTGTAGTAATAAGCTTGCAGAAGGTGTGCTGGAC...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp AAAGTCAGAGAGAAGCATTTAGTGTCTAAGAACCCTGTCCCAGGAAGGGAGAGGAGTTGTTCCTGTATGTaGAGCATCCAGTTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: KVREKHLVSKNPVPGRERSCSCM*SIQFSP
Trigger: CGGAGAGAACTGGATGCTGCACATACAGGAACAACT...CCTCTCCCTTCCTGGGACAGGGTTCTTAGACACTAAATGCTTCTCTCTGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp CTCAGGCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTATTTGGTTCATGATCTaGAACAGACTCCATCTCATG +
Preference number: 4 (lower is better)
Translates to: LRLRIRQTLHVFTVPPSAIWFMI*NRLHLM
Trigger: CATGAGATGGAGTCTGTTGCAGATCATGAACCAAAT...AGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGCCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGGAAGGCAAGGACTTGTaGATGACTCAGTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWEGKDL*MTQCPS
Trigger: GGAAGGACACTGAGTCATGCACAAGTCCTTGCCTTC...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTAAAATATGGATTCAGCTaGTCTGTGCTGGATGAAAAT +
Preference number: 4 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLKYGFS*SVLDEN
Trigger: ATTTTCATCCAGCACAGAGCAGCTGAATCCATATTT...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAAAGGACAGAGCAGTCTaGTCTGGTCTGGACTATGGC +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLEKDRAV*SGLDYG
Trigger: GCCATAGTCCAGACCAGAGCAGACTGCTCTGTCCTT...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp GGGAGCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGAATGGTTTTCCGGATaGGAATCTGTGAGACTTTCT +
Preference number: 4 (lower is better)
Translates to: GSRIWTHRTSVEKEQDLEEWFSG*ESVRLS
Trigger: AGAAAGTCTCACAGATTCGCATCCGGAAAACCATTC...CTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp AGACCAGCCCAAGGAGATGCTGAGGCCTCTCACCAAGAATTCAAATCCAATTCACCTGATGATTGTTCCTaGTCCTCTTCCTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RPAQGDAEASHQEFKSNSPDDCS*SSSLAK
Trigger: CTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGG...TGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp AAAGTCAGAGAGAAGCATTTAGTGTCTAAGAACCCTGTCCCAGGAAGGGAGAGGTTACTGAAGATAGGCTaGTGCTTCCTCCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: KVREKHLVSKNPVPGRERLLKIG*CFLLWM
Trigger: CATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAA...CCTCTCCCTTCCTGGGACAGGGTTCTTAGACACTAAATGCTTCTCTCTGACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACTTACTGAAGATAGGCTaGTGCTTCCTCCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHLLKIG*CFLLWM
Trigger: CATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAA...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp GTCACAAACTACCAAACAGAAAAGGAACTGCAGGGGCATCATGTATACCAATGTCTGCCCACAGACTCCTaGAGGCACAAACCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VTNYQTEKELQGHHVYQCLPTDS*RHKPRN
Trigger: GTTTCTGGGTTTGTGCCTGCAGGAGTCTGTGGGCAG...ACATTGGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTTGGTAGTTTGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACATCTGGAATCACACTTaGCTCAGGGTCAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHIWNHT*LRVSMK
Trigger: CTTCATGCTGACCCTGAGCCAAGTGTGATTCCAGAT...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGATGTGGAATGTTGATGTaGATCTTCCTTTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRCGMLM*IFLCSL
Trigger: GAGGGAGCAAAGGAAGATCCACATCAACATTCCACA...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGGTGGATATTTTCCTTTaGAGAAACAACAGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLVDIFL*RNNRLF
Trigger: AAAGAGCCTGTTGTTTCTCCAAAGGAAAATATCCAC...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CAACAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCTTCCAGATTTCTCTaGATGCTGACTAAGGAGTTA +
Preference number: 4 (lower is better)
Translates to: QQTWNLRAHCTRWPAQRGPSRFL*MLTKEL
Trigger: TAACTCCTTAGTCAGCATCCAGAGAAATCTGGAAGG...TCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTACTGTTATTTGAGCGCAGCCTaGAATGTAGAGCTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: APNKANATCLHRTSLSYCYLSAA*NVELLF
Trigger: GAACAAAAGCTCTACATTCCAGGCTGCGCTCAAATA...ACAGTAGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGCTACCATACCTTCTGTaGACTCATCACAACCAGACA +
Preference number: 4 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWLPYLL*THHNQT
Trigger: TGTCTGGTTGTGATGAGTCCACAGAAGGTATGGTAG...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGAGTTTGGAGGCAAGGATaGACAGCTTGTTTAGTAAGG +
Preference number: 4 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRVWRQG*TACLVR
Trigger: CCTTACTAAACAAGCTGTCCATCCTTGCCTCCAAAC...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp AGACCAGCCCAAGGAGATGCTGAGGCCTCTCACCAAGAATTCAAATCCAATTCATCTTCTTTAACCTTTTaGGTCGAGGAAGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: RPAQGDAEASHQEFKSNSSSLTF*VEEGPW
Trigger: CCATGGGCCTTCCTCGACCCAAAAGGTTAAAGAAGA...TGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGCTGTGCATTTTTGAGTaGTTTGGCGGTAGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWLCIFE*FGGRAK
Trigger: TTTTGCCCTACCGCCAAACCACTCAAAAATGCACAG...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAACAGAGACTGAGGAGGTaGCTGGATGTCGTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: CSSSLAKKVSSSISFCIKQRLRR*LDVVQV
Trigger: GACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG...TTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CCA 90 bp GGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACAGCCACCCACAATGCTGCTTCCTCCTGTaGATGGCAGAGACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GYSALLANYLNFGYSHPQCCFLL*MAETEE
Trigger: CTCCTCAGTCTCTGCCATCCACAGGAGGAAGCAGCA...TTGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTAATCCTGTGTGTCCTTaGAATCCTAGTGTTACTGAA +
Preference number: 4 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPNPVCP*NPSVTE
Trigger: TTCAGTAACACTAGGATTCCAAGGACACACAGGATT...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CCA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGAGCGGAACTTTCATATaGACGTGCAAATCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWSGTFI*TCKSCV
Trigger: CACACAGGATTTGCACGTCCATATGAAAGTTCCGCT...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGAAGCGGAACTTTCATATaGACGTGCAAATCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRSGTFI*TCKSCV
Trigger: CACACAGGATTTGCACGTCCATATGAAAGTTCCGCT...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CCA 90 bp GTCACAAACTACCAAACAGAAAAGGAACTGCAGGGGCATCATGTATACCAATGTGCTGCTCCATGCCAGTaGCTCCCAGGAGGATATGAA +
Preference number: 4 (lower is better)
Translates to: VTNYQTEKELQGHHVYQCAAPCQ*LPGGYE
Trigger: TTCATATCCTCCTGGGAGCCACTGGCATGGAGCAGC...ACATTGGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTTGGTAGTTTGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACCCTTGGAAGCCTCCGTaGATGACCAAGTGTGTATTT +
Preference number: 4 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHPWKPP*MTKCVF
Trigger: AAATACACACTTGGTCATCCACGGAGGCTTCCAAGG...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp CACTGCAGGAACACATCTCTGGGTCTGAAACATGACCCCGACTCTCTCCCCACATTGCTGCTTGATTTGTaGCTAGACGGTAACATTAAA +
Preference number: 4 (lower is better)
Translates to: HCRNTSLGLKHDPDSLPTLLLDL*LDGNIK
Trigger: TTTAATGTTACCGTCTAGCCACAAATCAAGCAGCAA...TGTGGGGAGAGAGTCGGGGTCATGTTTCAGACCCAGAGATGTGTTCCTGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAGGCAGCTATTTTTACTaGCCCAGACCAGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLEGSYFY*PRPAQG
Trigger: TCCTTGGGCTGGTCTGGGCCAGTAAAAATAGCTGCC...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp AAAGTCAGAGAGAAGCATTTAGTGTCTAAGAACCCTGTCCCAGGAAGGGAGAGGGTCTTTTACATCAAATaGTTCACCCCTGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: KVREKHLVSKNPVPGRERVFYIK*FTPETS
Trigger: GGAGGTCTCAGGGGTGAATCATTTGATGTAAAAGAC...CCTCTCCCTTCCTGGGACAGGGTTCTTAGACACTAAATGCTTCTCTCTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp TCTTCCATGCAGCGATCAACTGGGTCAAATGCCTATCATGTATTCTTAAGACATGGCTCAGGGTCAGCATaGAGCTCTCTGGAGACACTT +
Preference number: 4 (lower is better)
Translates to: SSMQRSTGSNAYHVFLRHGSGSA*SSLETL
Trigger: AAGTGTCTCCAGAGAGCTTCATGCTGACCCTGAGCC...ATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GTCACAAACTACCAAACAGAAAAGGAACTGCAGGGGCATCATGTATACCAATGTCAACAACTCTCCACATaGGTCCTCTGCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VTNYQTEKELQGHHVYQCQQLST*VLCSSK
Trigger: CTTGGAGCTGCAGAGGACTCATGTGGAGAGTTGTTG...ACATTGGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTTGGTAGTTTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGGATTTCTCTGGATGCTaGCTAAGGAGTTACAGTCTT +
Preference number: 4 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWDFSGC*LRSYSL
Trigger: AAGACTGTAACTCCTTAGTCAGCATCCAGAGAAATC...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp AAAGTCAGAGAGAAGCATTTAGTGTCTAAGAACCCTGTCCCAGGAAGGGAGAGGGCCTTCGGTTGGTTCTaGTTTTGTGCATCATCTAAC +
Preference number: 4 (lower is better)
Translates to: KVREKHLVSKNPVPGRERAFGWF*FCASSN
Trigger: GTTAGATGATGCACAAAATCAGAACCAACCGAAGGC...CCTCTCCCTTCCTGGGACAGGGTTCTTAGACACTAAATGCTTCTCTCTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp CTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACATGTTGAGACCCTCAAACTaGATCGCTTCTCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: LMSYTRSWRWGRDCLKHMLRPSN*IASQQP
Trigger: AGGCTGTTGAGAAGCGATTCAGTTTGAGGGTCTCAA...CATGTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp TCAGCAGTAAAAGTAGAGGACCCTCCTTCACCAGTTTCTAAAAAGGTTGCACCTCCTCAACTACTGAAATaGGCCAGTGAGACCACACAG +
Preference number: 4 (lower is better)
Translates to: SAVKVEDPPSPVSKKVAPPQLLK*ASETTQ
Trigger: CTGTGTGGTCTCACTGGCTCATTTCAGTAGTTGAGG...AGGTGCAACCTTTTTAGAAACTGGTGAAGGAGGGTCCTCTACTTTTACTGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR TCA 90 bp GCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGCTGATAGTAGTTTTTCAATaGTCGGGAGAGAAACCTGCT +
Preference number: 4 (lower is better)
Translates to: AGYGHTGLQWKRNKTSRLIVVFQ*SGEKPA
Trigger: AGCAGGTTTCTCTCCCGATCATTGAAAAACTACTAT...CAGCCTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAGAGGATATGAAGAGGTaGTGCTGGTGTCCTGACGAT +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLEEDMKR*CWCPDD
Trigger: ATCGTCAGGACACCAGCATCACCTCTTCATATCCTC...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGATCTTCTCTAATAGACTaGCTTGGAAATGTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRSSLID*LGNVPR
Trigger: TCTAGGGACATTTCCAAGTCAGTCTATTAGAGAAGA...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCTCAATGCTATGTCTaGGGCAGTGGGCCTAGAACA +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLESQCYV*GSGPRT
Trigger: TGTTCTAGGCCCACTGCCTCAGACATAGCATTGAGA...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAGGAAGCCTCCGTGGATaGCCAAGTGTGTATTTCACT +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLEGSLRG*PSVYFT
Trigger: AGTGAAATACACACTTGGTCATCCACGGAGGCTTCC...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGCTCAGTGCCGAAACTaGATGTTAAGACAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TKRNFHMDVQILCVLGILAQCRN*MLRQVW
Trigger: CCACACCTGTCTTAACATTCAGTTTCGGCACTGAGC...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAACAAGGAGCCCTTTTCTaGCACGAATCCAGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLEQGALF*HESRKG
Trigger: TCCTTTCCTGGATTCGTGTCAGAAAAGGGCTCCTTG...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp ATCCAATTCAGCACCAGAGAGGGGCTTGTGAAGACACACAATCAACAAACATGGTTCTCTTATAATTCCTaGCTGGCCCCCTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: IQFSTREGLVKTHNQQTWFSYNS*LAPWIS
Trigger: AGAGATCCAGGGGGCCAGGCAGGAATTATAAGAGAA...CCATGTTTGTTGATTGTGTGTCTTCACAAGCCCCTCTCTGGTGCTGAATTGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGCATTTAACTGGGTGTTaGCTTCCAGATTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWHLTGC*LPDFSG
Trigger: TCCAGAGAAATCTGGAAGGCAACACCCAGTTAAATG...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp TGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACAAAGAGTTATCAACTTaGAGGCTGATTTTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: WKATNTVGQPVSLPKPLYKELST*RLILLD
Trigger: GTCCAGCAAAATCAGCCTGCAAGTTGATAACTCTTT...GTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp AGACCAGCCCAAGGAGATGCTGAGGCCTCTCACCAAGAATTCAAATCCAATTCAGTCAAGGACTTCATCTaGCTTCTGATCGAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: RPAQGDAEASHQEFKSNSVKDFI*LLIECF
Trigger: GAAACACTCGATCAGAAGGCAGATGAAGTCCTTGAC...TGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp ATGAGTAGCTGCTATACTTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTTGAGGACTCAGTCGTaGAATCTGAGCTGGATGATT +
Preference number: 4 (lower is better)
Translates to: MSSCYTLGSVPHPCVCSVLRTQS*NLSWMI
Trigger: AATCATCCAGCTCAGATTGCACGACTGAGTCCTCAA...AACACTGCAAACACAGGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp GCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAAGACTTGGTTGCCGCTTaGAGTGAGGGGAATGAAGAG +
Preference number: 4 (lower is better)
Translates to: APLPWQRRSPVPLVSVSKDLVAA*SEGNEE
Trigger: CTCTTCATTCCCCTCACTGCAAGCGGCAACCAAGTC...TTTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR GCA 90 bp TTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACGAATGGTTTTCCGGATaGGAATCTGTGAGACTTTCT +
Preference number: 4 (lower is better)
Translates to: FGICPPSLCLQCFSDHFNEWFSG*ESVRLS
Trigger: AGAAAGTCTCACAGATTCGCATCCGGAAAACCATTC...GTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR GCA 90 bp TGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAACTGAAGATAGGCTGCTaGTTCCTCCTGTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: CSSSLAKKVSSSISFCIKLKIGC*FLLWMA
Trigger: TGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAG...TTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR GCA 90 bp GCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACTCAATTACTTTCATATGGACGTaGAAATCCTGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: ATNTVGQPVSLPKPLYSITFIWT*KSCVSL
Trigger: CAAGGACACACAGGATTTGCACGTCCATATGAAAGT...AATTGAGTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp CAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGATCAACTGGGTCAAATaGCTATCATGTATTCTTAAG +
Preference number: 4 (lower is better)
Translates to: QRLRRWLDVVQVHFQEKGINWVK*LSCILK
Trigger: CTTAAGAATACATGATAGGCATTTGACCCAGTTGAT...CCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGCCTGACGATGACTTTTaGATCCCACTCACTAGCCAT +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWPDDDF*IPLTSH
Trigger: ATGGCTAGTGAGTGGGATGCAAAAGTCATCGTCAGG...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp CTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACATGAATCTGAGAGCACACTaGACTAGATGGCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: LMSYTRSWRWGRDCLKHMNLRAH*TRWPAQ
Trigger: TTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATT...CATGTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGAAACAGAAAAGGAACTaGAGGGGCATCATGTATACC +
Preference number: 4 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWKQKRN*RGIMYT
Trigger: GGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTT...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GCTTTAACAGGAGATGAGGTACAGCTGAACTCATGGAGACATGAAGCTGGAAAGATCTCTGAAGACCTTTaGCTCCATGCTCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: ALTGDEVQLNSWRHEAGKISEDL*LHALAS
Trigger: AGAAGCGAGAGCATGGAGCCAAAGGTCTTCAGAGAT...CTTTCCAGCTTCATGTCTCCATGAGTTCAGCTGTACCTCATCTCCTGTTAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAACTTATAATTCCTGCCTaGCCCCCTGGATCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLELIIPA*PPGSLK
Trigger: CTTCAGAGATCCAGGGGGCCAGGCAGGAATTATAAG...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGGCTGATTTTGTCTACTTCTTaGAATTCACCGCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGYGHTGLQWKRNKTSRLILSTS*NSPHPA
Trigger: AGCTGGATGCGGTGAATTCCAAGAAGTAGACAAAAT...CAGCCTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGATTTACTTAATATATTaGGCTCTACAGGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: ETEEVAGCRSGPFPGEREIYLIY*ALQGLS
Trigger: AGACAACCCCTGTAGAGCCCAATATATTAAGTAAAT...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GGGAGAGGTATTGAGGTGAAACATAGGTCGTGTCTATACAGTCTGGGCAAAGTGTCTGATCTTATCTCCTaGAAGGCTGCCATTCGTTTC +
Preference number: 4 (lower is better)
Translates to: GRGIEVKHRSCLYSLGKVSDLIS*KAAIRF
Trigger: GAAACGAATGGCAGCCTTCCAGGAGATAAGATCAGA...CACTTTGCCCAGACTGTATAGACACGACCTATGTTTCACCTCAATACCTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CTCAGGCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTACTTTTGCATTCATCTaGTCTGTTTTGGTTACTCTG +
Preference number: 4 (lower is better)
Translates to: LRLRIRQTLHVFTVPPSATFAFI*SVLVTL
Trigger: CAGAGTAACCAAAACAGACCAGATGAATGCAAAAGT...AGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp AAAGTCAGAGAGAAGCATTTAGTGTCTAAGAACCCTGTCCCAGGAAGGGAGAGGGTTTGGAGGCAAGGATaGACAGCTTGTTTAGTAAGG +
Preference number: 4 (lower is better)
Translates to: KVREKHLVSKNPVPGRERVWRQG*TACLVR
Trigger: CCTTACTAAACAAGCTGTCCATCCTTGCCTCCAAAC...CCTCTCCCTTCCTGGGACAGGGTTCTTAGACACTAAATGCTTCTCTCTGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GGGAGAGGTATTGAGGTGAAACATAGGTCGTGTCTATACAGTCTGGGCAAAGTGCATGCAGCGATCAACTaGGTCAAATGCCTATCATGT +
Preference number: 4 (lower is better)
Translates to: GRGIEVKHRSCLYSLGKVHAAIN*VKCLSC
Trigger: ACATGATAGGCATTTGACCCAGTTGATCGCTGCATG...CACTTTGCCCAGACTGTATAGACACGACCTATGTTTCACCTCAATACCTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAAAGGGGAGCAGGATATaGACACACAGGACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: TKRNFHMDVQILCVLGILKGSRI*THRTSV
Trigger: CACTGAAGTCCTGTGTGTCCATATCCTGCTCCCCTT...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACGCACACTTTTCCCTCTaGCTCATGTCAGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHAHFSL*LMSVFL
Trigger: CAGAAAAACTGACATGAGCCAGAGGGAAAAGTGTGC...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp GGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACAGCCACCCACAATTGGGATTCACAGCATaGGTTTCTGGGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GYSALLANYLNFGYSHPQLGFTA*VSGLLR
Trigger: CCTGAGGAGCCCAGAAACCCATGCTGTGAATCCCAA...TTGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CTCAGGCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTTCACTGCCTAAAAGTTaGTCTTTCGCAGATCTTAAT +
Preference number: 4 (lower is better)
Translates to: LRLRIRQTLHVFTVPPSASLPKS*SFADLN
Trigger: ATTAAGATCTGCGAAAGACCAACTTTTAGGCAGTGA...AGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GGGAGAGGTATTGAGGTGAAACATAGGTCGTGTCTATACAGTCTGGGCAAAGTGCCTCATCACTGGTCATaGTTTTGTCTACTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: GRGIEVKHRSCLYSLGKVPHHWS*FCLLLG
Trigger: TCCAAGAAGTAGACAAAATCATGACCAGTGATGAGG...CACTTTGCCCAGACTGTATAGACACGACCTATGTTTCACCTCAATACCTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GGGAGAGGTATTGAGGTGAAACATAGGTCGTGTCTATACAGTCTGGGCAAAGTGCTGTTTTGGTTACTCTaGCAGTCAAGGACTTCATCT +
Preference number: 4 (lower is better)
Translates to: GRGIEVKHRSCLYSLGKVLFWLL*QSRTSS
Trigger: AGATGAAGTCCTTGACTGTCAGAGTAACCAAAACAG...CACTTTGCCCAGACTGTATAGACACGACCTATGTTTCACCTCAATACCTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GCTTTAACAGGAGATGAGGTACAGCTGAACTCATGGAGACATGAAGCTGGAAAGATCTCCTTGGCTGACTaGCCTTCACTTTTGCATTCA +
Preference number: 4 (lower is better)
Translates to: ALTGDEVQLNSWRHEAGKISLAD*PSLLHS
Trigger: TGAATGCAAAAGTGAAGGTCAGTCAGCCAAGGAGAT...CTTTCCAGCTTCATGTCTCCATGAGTTCAGCTGTACCTCATCTCCTGTTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGGCCTTCGGTTGGTTCTaGTTTTGTGCATCATCTAAC +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWAFGWF*FCASSN
Trigger: GTTAGATGATGCACAAAATCAGAACCAACCGAAGGC...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR TCA 90 bp ATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACATCTCCCTGGATGATTTCACATaGAAGGATACTGGGAAGATT +
Preference number: 4 (lower is better)
Translates to: ICPPSLCLQCFSDHFNISLDDFT*KDTGKI
Trigger: AATCTTCCCAGTATCCTTTCATGTGAAATCATCCAG...GGAGATGTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR TCA 90 bp GGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACAGCCACCCACAACCGGATGCGAATCTGTaGGACTTTCTTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GYSALLANYLNFGYSHPQPDANL*DFLWPL
Trigger: AAGAGGCCAAAGAAAGTCTCACAGATTCGCATCCGG...TTGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACGAGCCCAGAGTACAATaGGGTGGCCCTCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: ESRKGYSALLANYLNFGYEPRVQ*GGPQRR
Trigger: CCTTCTTTGAGGGCCACCTCATTGTACTCTGGGCTC...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GGGAGCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGAAGAAAAAGTGGACATaGTCTGCTTTAACAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GSRIWTHRTSVEKEQDLEKKKWT*SALTGD
Trigger: ATCTCCTGTTAAAGCAGATCATGTCCACTTTTTCTT...CTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGCAAGTTCGATGGGGCTaGTTCTTTAAGGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWQVRWG*FFKGRT
Trigger: AGTTCTTCCCTTAAAGAAGCAGCCCCATCGAACTTG...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGATTCAGCTGCTCTGTaGTGGATGAAAATCCGTCCA +
Preference number: 4 (lower is better)
Translates to: TKRNFHMDVQILCVLGILDSAAL*WMKIRP
Trigger: TGGACGGATTTTCATCCAGCACAGAGCAGCTGAATC...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp AGACCAGCCCAAGGAGATGCTGAGGCCTCTCACCAAGAATTCAAATCCAATTCATTCGAGAGAATAAAGTaGCATGGGCTTACTGTTAGG +
Preference number: 4 (lower is better)
Translates to: RPAQGDAEASHQEFKSNSFERIK*HGLTVR
Trigger: CCTAACAGTAAGCCCATGGCACTTTATTCTCTCGAA...TGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GTCACAAACTACCAAACAGAAAAGGAACTGCAGGGGCATCATGTATACCAATGTGTACCACGGCAGACATaGAGGAATCAAGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: VTNYQTEKELQGHHVYQCVPRQT*RNQVEL
Trigger: CAGTTCCACTTGATTCCTCCATGTCTGCCGTGGTAC...ACATTGGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTTGGTAGTTTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp ATCCAATTCAGCACCAGAGAGGGGCTTGTGAAGACACACAATCAACAAACATGGGTGAAAGTTCTTTGCTaGACTGCATCAGGAGATCCT +
Preference number: 4 (lower is better)
Translates to: IQFSTREGLVKTHNQQTWVKVLC*TASGDP
Trigger: AGGATCTCCTGATGCAGTCCAGCAAAGAACTTTCAC...CCATGTTTGTTGATTGTGTGTCTTCACAAGCCCCTCTCTGGTGCTGAATTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGATTGTGGGGATGGGATTaGAAGAACTCTTTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRLWGWD*KNSLKR
Trigger: CCTTTTTAAAGAGTTCTTCCAATCCCATCCCCACAA...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACTCGTGCAATCTGAGCTaGATGATTTCACATGAAAGG +
Preference number: 4 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHSCNLS*MISHER
Trigger: CCTTTCATGTGAAATCATCCAGCTCAGATTGCACGA...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp ATGAGTAGCTGCTATACTTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCGTGCAATCTGAGCTaGATGATTTCACATGAAAGG +
Preference number: 4 (lower is better)
Translates to: MSSCYTLGSVPHPCVCSVSCNLS*MISHER
Trigger: CCTTTCATGTGAAATCATCCAGCTCAGATTGCACGA...AACACTGCAAACACAGGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CCA 90 bp GTCACAAACTACCAAACAGAAAAGGAACTGCAGGGGCATCATGTATACCAATGTCTCTGGTCTGGACTATaGCAGTGCCTCCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: VTNYQTEKELQGHHVYQCLWSGL*QCLHSL
Trigger: AAGACTATGGAGGCACTGCCATAGTCCAGACCAGAG...ACATTGGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTTGGTAGTTTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAAGAGCATCCCTCTGGTCTGGACTATaGCAGTGCCTCCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: SLAKKVSSSISFCIKRASLWSGL*QCLHSL
Trigger: AAGACTATGGAGGCACTGCCATAGTCCAGACCAGAG...GGATGCTCTTTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAACAGAAGGACCATGCTaGCTCCAAATGGATAGGACT +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLETEGPC*LQMDRT
Trigger: AGTCCTATCCATTTGGAGCCAGCATGGTCCTTCTGT...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGGCACATATGGTAACATaGTGTGGCTGCTTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: FHMDVQILCVLGILVLLKAHMVT*CGCLWC
Trigger: GCACCACAAGCAGCCACACCATGTTACCATATGTGC...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATACCAAGCAAGACTTTaGTACCAAGGCAGGGAATGG +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLEYQARL*YQGREW
Trigger: CCATTCCCTGCCTTGGTACCAAAGTCTTGCTTGGTA...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CCA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGTCCAATCCACGAACCTaGAACTCAGAGGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: FHMDVQILCVLGILVLLKSNPRT*NSEAES
Trigger: GCTTTCAGCCTCTGAGTTCCAGGTTCGTGGATTGGA...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CCA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGCCTGCTCCTCTTCCTTaGCAAAGAAGGTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: FHMDVQILCVLGILVLLKPAPLP*QRRSPV
Trigger: AACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGG...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CCA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACCAGAGACTGAGGAGGTaGCTGGATGTCGTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: ESRKGYSALLANYLNFGYQRLRR*LDVVQV
Trigger: GACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAAGTTACACTAGAAGCTaGAGATGGGGAAGGGATTGC +
Preference number: 4 (lower is better)
Translates to: TKRNFHMDVQILCVLGILSYTRS*RWGRDC
Trigger: GCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACT...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAAAGCCACAAATACTGTaGGTCAGCCTGTATCACTGC +
Preference number: 4 (lower is better)
Translates to: TKRNFHMDVQILCVLGILKPQIL*VSLYHC
Trigger: GCAGTGATACAGGCTGACCCACAGTATTTGTGGCTT...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp TCAGCAGTAAAAGTAGAGGACCCTCCTTCACCAGTTTCTAAAAAGGTTGCACCTAAGCCACAAATACTGTaGGTCAGCCTGTATCACTGC +
Preference number: 4 (lower is better)
Translates to: SAVKVEDPPSPVSKKVAPKPQIL*VSLYHC
Trigger: GCAGTGATACAGGCTGACCCACAGTATTTGTGGCTT...AGGTGCAACCTTTTTAGAAACTGGTGAAGGAGGGTCCTCTACTTTTACTGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGTTGAAGCGGGCTGCCTaGAAAGCCACAAATACTGTG +
Preference number: 4 (lower is better)
Translates to: FHMDVQILCVLGILVLLKLKRAA*KATNTV
Trigger: CACAGTATTTGTGGCTTTCCAGGCAGCCCGCTTCAA...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp AGACCAGCCCAAGGAGATGCTGAGGCCTCTCACCAAGAATTCAAATCCAATTCACACAATCAACAAACATaGAATCTGAGAGCACACTGC +
Preference number: 4 (lower is better)
Translates to: RPAQGDAEASHQEFKSNSHNQQT*NLRAHC
Trigger: GCAGTGTGCTCTCAGATTCCATGTTTGTTGATTGTG...TGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp TGCTGGTGTCCTGACGATGACTTTTGCATCCCACTCACTAGCCATGGAATGTTATTTGTATATCAGCAATaGCATCTGCTCTACCCTCTA +
Preference number: 4 (lower is better)
Translates to: CWCPDDDFCIPLTSHGMLFVYQQ*HLLYPL
Trigger: TAGAGGGTAGAGCAGATGTCATTGCTGATATACAAA...TAACATTCCATGGCTAGTGAGTGGGATGCAAAAGTCATCGTCAGGACACCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGCGCTGTGACATTCTATaGCAGAGACCACTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: FHMDVQILCVLGILVLLKRCDIL*QRPLEE
Trigger: TTCCTCAAGTGGTCTCTGTCATAGAATGTCACAGCG...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp TCTCAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCTTTTTCTCCCAACAATaGTTTGCTCCTGATAGGAAA +
Preference number: 4 (lower is better)
Translates to: SQQPDDCSCSSSLAKKVSFFSQQ*FAPDRK
Trigger: TTTCCTATCAGGAGCAAATCATTGTTGGGAGAAAAA...GGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR TCA 90 bp TCTTCCATGCAGCGATCAACTGGGTCAAATGCCTATCATGTATTCTTAAGACATAAAGCAGGAGCTTGCTaGCAGCTGATTCTGCTACCA +
Preference number: 4 (lower is better)
Translates to: SSMQRSTGSNAYHVFLRHKAGAC*QLILLP
Trigger: TGGTAGCAGAATCAGCTGTCAGCAAGCTCCTGCTTT...ATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp CTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACATGTCCTCTTCTGTTGGCTaGTTGAGATTAGTGTACCAT +
Preference number: 4 (lower is better)
Translates to: LMSYTRSWRWGRDCLKHMSSSVG*LRLVYH
Trigger: ATGGTACACTAATCTCAATCAGCCAACAGAAGAGGA...CATGTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GCTTTAACAGGAGATGAGGTACAGCTGAACTCATGGAGACATGAAGCTGGAAAGTGTAACAGGCACAGTTaGAACTATCTCTGCCATGTT +
Preference number: 4 (lower is better)
Translates to: ALTGDEVQLNSWRHEAGKCNRHS*NYLCHV
Trigger: AACATGGCAGAGATAGTTTCAACTGTGCCTGTTACA...CTTTCCAGCTTCATGTCTCCATGAGTTCAGCTGTACCTCATCTCCTGTTAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp TCAGCAGTAAAAGTAGAGGACCCTCCTTCACCAGTTTCTAAAAAGGTTGCACCTCCTGCCTCTTCAATCTaGATCAAGGAGGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: SAVKVEDPPSPVSKKVAPPASSI*IKEEKL
Trigger: CAGTTTTTCCTCCTTGATGCAGATTGAAGAGGCAGG...AGGTGCAACCTTTTTAGAAACTGGTGAAGGAGGGTCCTCTACTTTTACTGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp AGACCAGCCCAAGGAGATGCTGAGGCCTCTCACCAAGAATTCAAATCCAATTCATCATCTCACAGGCTATaGTCTGTTCATCTAAAAGTG +
Preference number: 4 (lower is better)
Translates to: RPAQGDAEASHQEFKSNSSSHRL*SVHLKV
Trigger: CACTTTTAGATGAACAGAGCATAGCCTGTGAGATGA...TGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAATCCCATCCACTAGCTaGCAAATATGGATTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TKRNFHMDVQILCVLGILIPSTS*QIWIQL
Trigger: CAGCTGAATCCATATTTGGCAGCTAGTGGATGGGAT...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAAATGTCTCTTCCATaGAGCGATCAACTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWKMSLP*SDQLGQ
Trigger: TTGACCCAGTTGATCGCTGCATGGAAGAGACATTTT...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAACAACATTCCAGGACGTaGCACTCACTCTTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLEQHSRT*HSLFSN
Trigger: ATTAGAGAAGAGTGAGTGGCACGTCCTGGAATGTTG...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTACAACATTCCAGGACGTaGCACTCACTCTTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: TKRNFHMDVQILCVLGILQHSRT*HSLFSN
Trigger: ATTAGAGAAGAGTGAGTGGCACGTCCTGGAATGTTG...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGCTTTCAAAGGGCTTGTaGCTGTGGGACTATCATGTG +
Preference number: 4 (lower is better)
Translates to: FHMDVQILCVLGILVLLKLSKGL*LWDYHV
Trigger: CACATGATAGTCCCACAGCCACAAGCCCTTTGAAAG...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACACAGGTTTGGTTACCTaGTGGAGAGATGTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHTGLVT*WRDVFY
Trigger: ATAAAAGACATCTCTCCACCAGGTAACCAAACCTGT...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACAGCCACCCACAATACCAAGCAAGACTTTaGTACCAAGGCAGGGAATGG +
Preference number: 4 (lower is better)
Translates to: GYSALLANYLNFGYSHPQYQARL*YQGREW
Trigger: CCATTCCCTGCCTTGGTACCAAAGTCTTGCTTGGTA...TTGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp AGACCAGCCCAAGGAGATGCTGAGGCCTCTCACCAAGAATTCAAATCCAATTCAAATCCTGTGTGTCCTTaGAATCCTAGTGTTACTGAA +
Preference number: 4 (lower is better)
Translates to: RPAQGDAEASHQEFKSNSNPVCP*NPSVTE
Trigger: TTCAGTAACACTAGGATTCCAAGGACACACAGGATT...TGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp TGTTACCTAACACCATTTCAGATAAAAACCATTAAGACCACACCCAACCATAGTGCTGCTCCATGCCAGTaGCTCCCAGGAGGATATGAA +
Preference number: 4 (lower is better)
Translates to: CYLTPFQIKTIKTTPNHSAAPCQ*LPGGYE
Trigger: TTCATATCCTCCTGGGAGCCACTGGCATGGAGCAGC...ACTATGGTTGGGTGTGGTCTTAATGGTTTTTATCTGAAATGGTGTTAGGTAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTATCACTGCATCTATACTaGCAACAGAGCTGGCAAACA +
Preference number: 4 (lower is better)
Translates to: TKRNFHMDVQILCVLGILSLHLY*QQSWQT
Trigger: TGTTTGCCAGCTCTGTTGCCAGTATAGATGCAGTGA...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp ATCCAATTCAGCACCAGAGAGGGGCTTGTGAAGACACACAATCAACAAACATGGCTTACAGGACTTATTTaGTCCTCTGGCATTAAACTC +
Preference number: 4 (lower is better)
Translates to: IQFSTREGLVKTHNQQTWLTGLI*SSGIKL
Trigger: GAGTTTAATGCCAGAGGATCAAATAAGTCCTGTAAG...CCATGTTTGTTGATTGTGTGTCTTCACAAGCCCCTCTCTGGTGCTGAATTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAACATTTAAAATGGGTCTaGGAGATGTTGCTCACGGGA +
Preference number: 4 (lower is better)
Translates to: APLPWQRRSPVPLVSVSKHLKWV*EMLLTG
Trigger: TCCCGTGAGCAACATCTCTCAGACCCATTTTAAATG...TTTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR TCA 90 bp TGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAACAGAGTACACAAACTaGGAAGTCTGTGCGCTTTTG +
Preference number: 4 (lower is better)
Translates to: CSSSLAKKVSSSISFCIKTEYTN*EVCALL
Trigger: CAAAAGCGCACAGACTTCTCAGTTTGTGTACTCTGT...TTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR TCA 90 bp GCTTTAACAGGAGATGAGGTACAGCTGAACTCATGGAGACATGAAGCTGGAAAGCTGGATGATTTCACATaGAAGGATACTGGGAAGATT +
Preference number: 4 (lower is better)
Translates to: ALTGDEVQLNSWRHEAGKLDDFT*KDTGKI
Trigger: AATCTTCCCAGTATCCTTTCATGTGAAATCATCCAG...CTTTCCAGCTTCATGTCTCCATGAGTTCAGCTGTACCTCATCTCCTGTTAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp TCAGCAGTAAAAGTAGAGGACCCTCCTTCACCAGTTTCTAAAAAGGTTGCACCTGGGACTGTAAAATCCTaGAATTCTAGAACTCGCTTC +
Preference number: 4 (lower is better)
Translates to: SAVKVEDPPSPVSKKVAPGTVKS*NSRTRF
Trigger: GAAGCGAGTTCTAGAATTTCAGGATTTTACAGTCCC...AGGTGCAACCTTTTTAGAAACTGGTGAAGGAGGGTCCTCTACTTTTACTGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR TCA 90 bp TCTTCCATGCAGCGATCAACTGGGTCAAATGCCTATCATGTATTCTTAAGACATTTGAGACCCTCAAACTaGATCGCTTCTCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: SSMQRSTGSNAYHVFLRHLRPSN*IASQQP
Trigger: AGGCTGTTGAGAAGCGATTCAGTTTGAGGGTCTCAA...ATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp GTCACAAACTACCAAACAGAAAAGGAACTGCAGGGGCATCATGTATACCAATGTGGAGAGGTATTGAGGTaGAACATAGGTCGTGTCTAT +
Preference number: 4 (lower is better)
Translates to: VTNYQTEKELQGHHVYQCGEVLR*NIGRVY
Trigger: ATAGACACGACCTATGTTTCACCTCAATACCTCTCC...ACATTGGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTTGGTAGTTTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp TGTTACCTAACACCATTTCAGATAAAAACCATTAAGACCACACCCAACCATAGTTCTCTGCCATGTTGGTaGCACTATAGCTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: CYLTPFQIKTIKTTPNHSSLPCW*HYSCAH
Trigger: GTGGGCACAGCTATAGTGTCACCAACATGGCAGAGA...ACTATGGTTGGGTGTGGTCTTAATGGTTTTTATCTGAAATGGTGTTAGGTAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAAACAAACATGGAATCTaGGAGCACACTGCACTAGAT +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLENKHGI*EHTALD
Trigger: ATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTT...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp TCTTCCATGCAGCGATCAACTGGGTCAAATGCCTATCATGTATTCTTAAGACATAGGGGTTGTCTGTCCTaGCTCTTCAATCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: SSMQRSTGSNAYHVFLRHRGCLS*LFNLHQ
Trigger: TTGATGCAGATTGAAGAGGCAGGACAGACAACCCCT...ATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACGAAGGCAAGGACTTGTaGATGACTCAGTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ESRKGYSALLANYLNFGYEGKDL*MTQCPS
Trigger: GGAAGGACACTGAGTCATGCACAAGTCCTTGCCTTC...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp TGTTACCTAACACCATTTCAGATAAAAACCATTAAGACCACACCCAACCATAGTCTTGCCGGAGCACAGTaGTCAGGAAAAGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: CYLTPFQIKTIKTTPNHSLAGAQ*SGKVLE
Trigger: CTCAAGGACTTTTCCTGAGCACTGTGCTCCGGCAAG...ACTATGGTTGGGTGTGGTCTTAATGGTTTTTATCTGAAATGGTGTTAGGTAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACAGCCACCCACAATTTTTGAGATCCCACTaGAGGAACACATCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GYSALLANYLNFGYSHPQFLRSH*RNTSLG
Trigger: ACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAA...TTGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGGGAGAAAAGTATCACTaGCTAAAAGTTGGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWGEKYH*LKVGLS
Trigger: CGAAAGACCAACTTTTAGGCAGTGATACTTTTCTCC...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACTACTGGAGGTGTGAATaGTTTTGTTTGAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHYWRCE*FCLKFH
Trigger: GTGGAATTTCAAACAAAACCATTCACACCTCCAGTA...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp AATTCTAGAACTCGCTTCCTCTTCTGTTGGCTGATTGAGATTAGTGTACCATTTAAGAAAAGGTCCACTTaGGAGGTTGAGACGGGCACT +
Preference number: 4 (lower is better)
Translates to: NSRTRFLFCWLIEISVPFKKRST*EVETGT
Trigger: AGTGCCCGTCTCAACCTCCCAAGTGGACCTTTTCTT...AAATGGTACACTAATCTCAATCAGCCAACAGAAGAGGAAGCGAGTTCTAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CCA 90 bp GGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACAGCCACCCACAAGGTAAGATTAGGATCTaGCCTAGGAATGGTTTTCCG +
Preference number: 4 (lower is better)
Translates to: GYSALLANYLNFGYSHPQGKIRI*PRNGFP
Trigger: CGGAAAACCATTCCTAGGCCAGATCCTAATCTTACC...TTGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp TCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAAGAGCATCCCTGTGCATTTTTGAGTaGTTTGGCGGTAGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: SLAKKVSSSISFCIKRASLCIFE*FGGRAK
Trigger: TTTTGCCCTACCGCCAAACCACTCAAAAATGCACAG...GGATGCTCTTTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CCA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGAGCGGAACTTTCATATaGACGTGCAAATCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: FHMDVQILCVLGILVLLKSGTFI*TCKSCV
Trigger: CACACAGGATTTGCACGTCCATATGAAAGTTCCGCT...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CCA 90 bp TCTTCCATGCAGCGATCAACTGGGTCAAATGCCTATCATGTATTCTTAAGACATTCAAAGAAGGCTGGCTaGGGATTTTTGAGATCCCAC +
Preference number: 4 (lower is better)
Translates to: SSMQRSTGSNAYHVFLRHSKKAG*GFLRSH
Trigger: GTGGGATCTCAAAAATCCCCAGCCAGCCTTCTTTGA...ATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACGCCCTCAAAGAAGGCTaGCTGGGGATTTTTGAGATC +
Preference number: 4 (lower is better)
Translates to: ESRKGYSALLANYLNFGYALKEG*LGIFEI
Trigger: GATCTCAAAAATCCCCAGCCAGCCTTCTTTGAGGGC...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp GGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACAGCCACCCACAAATTTCAAGTTTGCAGTaGGGCCCCCTTCTCAACTTT +
Preference number: 4 (lower is better)
Translates to: GYSALLANYLNFGYSHPQISSLQ*GPLLNF
Trigger: AAAGTTGAGAAGGGGGCCCCACTGCAAACTTGAAAT...TTGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACTTGCTGCTTGATTTGTaGCTAGACGGTAACATTAAA +
Preference number: 4 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHLLLDL*LDGNIK
Trigger: TTTAATGTTACCGTCTAGCCACAAATCAAGCAGCAA...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
3UTR CAA 72 bp AATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTaGTACTCAATTTTGTTACCTAACACCATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: NTVGQPVSLPKP*YSILLPNTISD
Trigger: ATCTGAAATGGTGTTAGGTAACAAAATTGAGTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGATGCTACTGGAGGTGTaGATGGTTTTGTTTGAAATT +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWMLLEV*MVLFEI
Trigger: AATTTCAAACAAAACCATTCACACCTCCAGTAGCAT...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GTCACAAACTACCAAACAGAAAAGGAACTGCAGGGGCATCATGTATACCAATGTACTTCATCTGCCTTCTaGTCGAGTGTTTCAACTGAT +
Preference number: 4 (lower is better)
Translates to: VTNYQTEKELQGHHVYQCTSSAF*SSVSTD
Trigger: ATCAGTTGAAACACTCGATCAGAAGGCAGATGAAGT...ACATTGGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTTGGTAGTTTGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp GCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAATCCTTCCTTAATGGATaGTGTAACCTTTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: APLPWQRRSPVPLVSVSKSFLNG*CNLSSF
Trigger: GAAGGAGGAAAGGTTACATCATCCATTAAGGAAGGA...TTTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR TCA 90 bp TCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAAGAGCATCCATCTGCTTTGGTATGTaGCTAACCAAGCTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: SLAKKVSSSISFCIKRASICFGM*LTKLLV
Trigger: TACCAAGAGCTTGGTTAGTCACATACCAAAGCAGAT...GGATGCTCTTTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR TCA 90 bp TCAGCAGTAAAAGTAGAGGACCCTCCTTCACCAGTTTCTAAAAAGGTTGCACCTTCTTCTCTAATAGACTaGCTTGGAAATGTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: SAVKVEDPPSPVSKKVAPSSLID*LGNVPR
Trigger: TCTAGGGACATTTCCAAGTCAGTCTATTAGAGAAGA...AGGTGCAACCTTTTTAGAAACTGGTGAAGGAGGGTCCTCTACTTTTACTGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp AGACCAGCCCAAGGAGATGCTGAGGCCTCTCACCAAGAATTCAAATCCAATTCAGATCTTTACTCACATTaGCATTTTTGTGTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: RPAQGDAEASHQEFKSNSDLYSH*HFCVLH
Trigger: ATGAAGGACACAAAAATGGCAATGTGAGTAAAGATC...TGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGTCTCAGGAAGGACTGTaGAGTCCTTTACATTTTCAC +
Preference number: 4 (lower is better)
Translates to: FHMDVQILCVLGILVLLKSQEGL*SPLHFH
Trigger: GTGAAAATGTAAAGGACTGCACAGTCCTTCCTGAGA...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGGATGATATGCACTGTTaGGATATCGTATGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: TVNKAELSYGRANPVCPWDDMHC*DIVCAF
Trigger: AAAAGCACATACGATATCGCAACAGTGCATATCATC...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR GCA 90 bp GCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAATTCGAGAGAATAAAGTaGCATGGGCTTACTGTTAGG +
Preference number: 4 (lower is better)
Translates to: APLPWQRRSPVPLVSVSKFERIK*HGLTVR
Trigger: CCTAACAGTAAGCCCATGGCACTTTATTCTCTCGAA...TTTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR GCA 90 bp GTCACAAACTACCAAACAGAAAAGGAACTGCAGGGGCATCATGTATACCAATGTACTTTCATATGGACGTaGAAATCCTGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VTNYQTEKELQGHHVYQCTFIWT*KSCVSL
Trigger: CAAGGACACACAGGATTTGCACGTCCATATGAAAGT...ACATTGGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTTGGTAGTTTGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp ATCCAATTCAGCACCAGAGAGGGGCTTGTGAAGACACACAATCAACAAACATGGGACAGATGCAGATTATaGAGTCAAGTCTTTTACATC +
Preference number: 4 (lower is better)
Translates to: IQFSTREGLVKTHNQQTWDRCRL*SQVFYI
Trigger: GATGTAAAAGACTTGACTCCATAATCTGCATCTGTC...CCATGTTTGTTGATTGTGTGTCTTCACAAGCCCCTCTCTGGTGCTGAATTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACCATGGAGGAATCAAGTaGAACTGGCTGAGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: ESRKGYSALLANYLNFGYHGGIK*NWLSLY
Trigger: GTAGAGACTCAGCCAGTTCCACTTGATTCCTCCATG...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATTCACAGACCAGGTTTaGTTTACACAACTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLEFTDQV*FTQLFL
Trigger: AAGGAAGAGTTGTGTAAACCAAACCTGGTCTGTGAA...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TCAGCAGTAAAAGTAGAGGACCCTCCTTCACCAGTTTCTAAAAAGGTTGCACCTGAGCAGTACCTTGCTTaGGTTTTAATACCTCACTTA +
Preference number: 4 (lower is better)
Translates to: SAVKVEDPPSPVSKKVAPEQYLA*VLIPHL
Trigger: TAAGTGAGGTATTAAAACCCAAGCAAGGTACTGCTC...AGGTGCAACCTTTTTAGAAACTGGTGAAGGAGGGTCCTCTACTTTTACTGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAATAACAGTAGGAGACTaGTCCAACACTTTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLEITVGD*SNTFSG
Trigger: TCCTGAAAAAGTGTTGGACCAGTCTCCTACTGTTAT...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATGTAGACATCTGCTTTaGTATGTGACTAACCAAGCT +
Preference number: 4 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLECRHLL*YVTNQA
Trigger: AGCTTGGTTAGTCACATACCAAAGCAGATGTCTACA...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp GTCACAAACTACCAAACAGAAAAGGAACTGCAGGGGCATCATGTATACCAATGTCCATCCACTAGCAAATaGGGAAGCAAAAGAAACCTA +
Preference number: 4 (lower is better)
Translates to: VTNYQTEKELQGHHVYQCPSTSK*GSKRNL
Trigger: TAGGTTTCTTTTGCTTCCCCATTTGCTAGTGGATGG...ACATTGGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTTGGTAGTTTGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp TGTTACCTAACACCATTTCAGATAAAAACCATTAAGACCACACCCAACCATAGTGCAGCTGTGGAATGTTaGTGTGGATCTTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: CYLTPFQIKTIKTTPNHSAAVEC*CGSSFA
Trigger: AGCAAAGGAAGATCCACATCAACATTCCACAGCTGC...ACTATGGTTGGGTGTGGTCTTAATGGTTTTTATCTGAAATGGTGTTAGGTAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp AATTCTAGAACTCGCTTCCTCTTCTGTTGGCTGATTGAGATTAGTGTACCATTTTGCTGTTTTTCAGCATaGTTAAGTATCCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: NSRTRFLFCWLIEISVPFCCFSA*LSIPRH
Trigger: ATGCCGGGGGATACTTAATCATGCTGAAAAACAGCA...AAATGGTACACTAATCTCAATCAGCCAACAGAAGAGGAAGCGAGTTCTAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CCA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGTTGTGGGGATGGGATTaGAAGAACTCTTTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: FHMDVQILCVLGILVLLKLWGWD*KNSLKR
Trigger: CCTTTTTAAAGAGTTCTTCCAATCCCATCCCCACAA...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGTGTAGACATCTGCTTTaGTATGTGACTAACCAAGCT +
Preference number: 4 (lower is better)
Translates to: FHMDVQILCVLGILVLLKCRHLL*YVTNQA
Trigger: AGCTTGGTTAGTCACATACCAAAGCAGATGTCTACA...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CCA 90 bp TGTTACCTAACACCATTTCAGATAAAAACCATTAAGACCACACCCAACCATAGTATCCCAGGGCAACCGTaGGACAAGAAGAAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: CYLTPFQIKTIKTTPNHSIPGQP*DKKKEK
Trigger: CTTTTCTTTCTTCTTGTCCCACGGTTGCCCTGGGAT...ACTATGGTTGGGTGTGGTCTTAATGGTTTTTATCTGAAATGGTGTTAGGTAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GCTTTAACAGGAGATGAGGTACAGCTGAACTCATGGAGACATGAAGCTGGAAAGCAATTATTTAAACTTTaGATACAGCCACCCACAATG +
Preference number: 4 (lower is better)
Translates to: ALTGDEVQLNSWRHEAGKQLFKL*IQPPTM
Trigger: CATTGTGGGTGGCTGTATCCAAAGTTTAAATAATTG...CTTTCCAGCTTCATGTCTCCATGAGTTCAGCTGTACCTCATCTCCTGTTAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp TGTTACCTAACACCATTTCAGATAAAAACCATTAAGACCACACCCAACCATAGTTGCTGTTTTTCAGCATaGTTAAGTATCCCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: CYLTPFQIKTIKTTPNHSCCFSA*LSIPRH
Trigger: ATGCCGGGGGATACTTAATCATGCTGAAAAACAGCA...ACTATGGTTGGGTGTGGTCTTAATGGTTTTTATCTGAAATGGTGTTAGGTAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACAGCCACCCACAAACTGACCTTCACTTTTaGATTCATCTGGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: GYSALLANYLNFGYSHPQTDLHF*IHLVCF
Trigger: AAAACAGACCAGATGAATGCAAAAGTGAAGGTCAGT...TTGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGAAAATTCATGGACTGTaGATTTTTGAGTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: FHMDVQILCVLGILVLLKKIHGL*IFEWFG
Trigger: GCCAAACCACTCAAAAATGCACAGTCCATGAATTTT...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR GCA 90 bp GTCACAAACTACCAAACAGAAAAGGAACTGCAGGGGCATCATGTATACCAATGTAAAATTCATGGACTGTaGATTTTTGAGTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: VTNYQTEKELQGHHVYQCKIHGL*IFEWFG
Trigger: GCCAAACCACTCAAAAATGCACAGTCCATGAATTTT...ACATTGGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTTGGTAGTTTGTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR GCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAATCAACTGGGTCAAATaGCTATCATGTATTCTTAAG +
Preference number: 4 (lower is better)
Translates to: TKRNFHMDVQILCVLGILINWVK*LSCILK
Trigger: CTTAAGAATACATGATAGGCATTTGACCCAGTTGAT...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp TCTTCCATGCAGCGATCAACTGGGTCAAATGCCTATCATGTATTCTTAAGACATTTTCTTCAGCAGCTGTaGAATGTTGATGTGGATCTT +
Preference number: 4 (lower is better)
Translates to: SSMQRSTGSNAYHVFLRHFLQQL*NVDVDL
Trigger: AAGATCCACATCAACATTCCACAGCTGCTGAAGAAA...ATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAAAAATACAGTTTCTTTaGATACATCCTGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TKRNFHMDVQILCVLGILKIQFL*IHPAPF
Trigger: GAAAGGAGCAGGATGTATCCAAAGAAACTGTATTTT...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TGTTACCTAACACCATTTCAGATAAAAACCATTAAGACCACACCCAACCATAGTGCACACTTTTCCCTCTaGCTCATGTCAGTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: CYLTPFQIKTIKTTPNHSAHFSL*LMSVFL
Trigger: CAGAAAAACTGACATGAGCCAGAGGGAAAAGTGTGC...ACTATGGTTGGGTGTGGTCTTAATGGTTTTTATCTGAAATGGTGTTAGGTAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp TCTTCCATGCAGCGATCAACTGGGTCAAATGCCTATCATGTATTCTTAAGACATTTTTTCTCCCAACAATaGTTTGCTCCTGATAGGAAA +
Preference number: 4 (lower is better)
Translates to: SSMQRSTGSNAYHVFLRHFFSQQ*FAPDRK
Trigger: TTTCCTATCAGGAGCAAATCATTGTTGGGAGAAAAA...ATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR TCA 90 bp AATTCTAGAACTCGCTTCCTCTTCTGTTGGCTGATTGAGATTAGTGTACCATTTCTGGATGATTTCACATaGAAGGATACTGGGAAGATT +
Preference number: 4 (lower is better)
Translates to: NSRTRFLFCWLIEISVPFLDDFT*KDTGKI
Trigger: AATCTTCCCAGTATCCTTTCATGTGAAATCATCCAG...AAATGGTACACTAATCTCAATCAGCCAACAGAAGAGGAAGCGAGTTCTAGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR GCA 90 bp TCTTCCATGCAGCGATCAACTGGGTCAAATGCCTATCATGTATTCTTAAGACATCACAACATTAAAAAGTaGAACTTACTTCGAATGGGG +
Preference number: 4 (lower is better)
Translates to: SSMQRSTGSNAYHVFLRHHNIKK*NLLRMG
Trigger: CCCCATTCGAAGTAAGTTGCACTTTTTAATGTTGTG...ATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp TGTTACCTAACACCATTTCAGATAAAAACCATTAAGACCACACCCAACCATAGTTACTTAGCATCTCCTTaGCTGACTGACCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: CYLTPFQIKTIKTTPNHSYLASP*LTDLHF
Trigger: AAAGTGAAGGTCAGTCAGCCAAGGAGATGCTAAGTA...ACTATGGTTGGGTGTGGTCTTAATGGTTTTTATCTGAAATGGTGTTAGGTAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACACAGAGCTTTCATCATaGCAAGACATCGACTCTTTT +
Preference number: 4 (lower is better)
Translates to: ESRKGYSALLANYLNFGYTELSS*QDIDSF
Trigger: AAAAGAGTCGATGTCTTGCCATGATGAAAGCTCTGT...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp TGTTACCTAACACCATTTCAGATAAAAACCATTAAGACCACACCCAACCATAGTCACAATCAACAAACATaGAATCTGAGAGCACACTGC +
Preference number: 4 (lower is better)
Translates to: CYLTPFQIKTIKTTPNHSHNQQT*NLRAHC
Trigger: GCAGTGTGCTCTCAGATTCCATGTTTGTTGATTGTG...ACTATGGTTGGGTGTGGTCTTAATGGTTTTTATCTGAAATGGTGTTAGGTAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR TCA 90 bp TGTTACCTAACACCATTTCAGATAAAAACCATTAAGACCACACCCAACCATAGTCTTTTATTTGGTTCATaGTCTGCAACAGACTCCATC +
Preference number: 4 (lower is better)
Translates to: CYLTPFQIKTIKTTPNHSLLFGS*SATDSI
Trigger: GATGGAGTCTGTTGCAGATCATGAACCAAATAAAAG...ACTATGGTTGGGTGTGGTCTTAATGGTTTTTATCTGAAATGGTGTTAGGTAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR GCA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACATCTCTTTGTTTAAATaGAGTAGAGAGTCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: ESRKGYSALLANYLNFGYISLFK*SRESVG
Trigger: GCCAACTGACTCTCTACTGCATTTAAACAAAGAGAT...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACGTAAAAGTTTCTTTATaGTCCTCAGGGTTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: ESRKGYSALLANYLNFGYVKVSL*SSGFVK
Trigger: CTTGACAAACCCTGAGGACCATAAAGAAACTTTTAC...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CCA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACTCACTGCCTAAAAGTTaGTCTTTCGCAGATCTTAAT +
Preference number: 4 (lower is better)
Translates to: ESRKGYSALLANYLNFGYSLPKS*SFADLN
Trigger: ATTAAGATCTGCGAAAGACCAACTTTTAGGCAGTGA...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CCA 90 bp TGTTACCTAACACCATTTCAGATAAAAACCATTAAGACCACACCCAACCATAGTCAATTATTTAAACTTTaGATACAGCCACCCACAATG +
Preference number: 4 (lower is better)
Translates to: CYLTPFQIKTIKTTPNHSQLFKL*IQPPTM
Trigger: CATTGTGGGTGGCTGTATCCAAAGTTTAAATAATTG...ACTATGGTTGGGTGTGGTCTTAATGGTTTTTATCTGAAATGGTGTTAGGTAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS TCA 90 bp CGGATGGCCCCGCCCCTCCGGAGAGCTGCAGCCAATCAGACGGCGTaGGGCCAGCAGTGGGTGCGGCTGCGCTTGGCGCTGCGCATATCC +
Preference number: 5 (lower is better)
Translates to: RMAPPLRRAAANQTA*GQQWVRLRLALRIS
Trigger: GGATATGCGCAGCGCCAAGCGCAGCCGCACCCACTGCTGGCCTCACGCCGTCTGATTGGCTGCAGCTCTCCGGAGGGGCGGGGCCATCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS TCA 90 bp GGCTTGAGTCACCGCGCCCGGCCCACGTGGCGAGTCTTAACCACGTaGCCCTCCCCGCTCTCCAGCCCGGCAGGTACCAGCAAAGGACTA +
Preference number: 5 (lower is better)
Translates to: GLSHRARPTWRVLTT*PSPLSSPAGTSKGL
Trigger: TAGTCCTTTGCTGGTACCTGCCGGGCTGGAGAGCGGGGAGGGTCACGTGGTTAAGACTCGCCACGTGGGCCGGGCGCGGTGACTCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS GCA 90 bp TCCAATATGGATAGCTTCTCGGATGGCCCCGCCCCTCCGGAGAGCTaGAGCCAATCAGACGGCGTGAGGCCAGCAGTGGGTGCGGCTGCG +
Preference number: 5 (lower is better)
Translates to: SNMDSFSDGPAPPES*SQSDGVRPAVGAAA
Trigger: CGCAGCCGCACCCACTGCTGGCCTCACGCCGTCTGATTGGCTGCAGCTCTCCGGAGGGGCGGGGCCATCCGAGAAGCTATCCATATTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CAA 90 bp GGAGTGCAGTGGCGCGACCTCGGCTCACGGCACCTACAGTCTCCCGAGTTCAAGGGTCCACTTGGGAGGTaGAGACGGGCACTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: GVQWRDLGSRHLQSPEFKGPLGR*RRALEG
Trigger: GCCCTCCAGTGCCCGTCTCAACCTCCCAAGTGGACC...CTTGAACTCGGGAGACTGTAGGTGCCGTGAGCCGAGGTCGCGCCACTGCACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS GCA 90 bp GAGCTGCAGCCAATCAGACGGCGTGAGGCCAGCAGTGGGTGCGGCTaGGCTTGGCGCTGCGCATATCCGAATACCAGGAAGTGCCCGGTT +
Preference number: 5 (lower is better)
Translates to: ELQPIRRREASSGCG*AWRCAYPNTRKCPV
Trigger: AACCGGGCACTTCCTGGTATTCGGATATGCGCAGCGCCAAGCGCAGCCGCACCCACTGCTGGCCTCACGCCGTCTGATTGGCTGCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS GCA 90 bp TCCGGAGAGCTGCAGCCAATCAGACGGCGTGAGGCCAGCAGTGGGTaGGGCTGCGCTTGGCGCTGCGCATATCCGAATACCAGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: SGELQPIRRREASSG*GCAWRCAYPNTRKC
Trigger: GCACTTCCTGGTATTCGGATATGCGCAGCGCCAAGCGCAGCCGCACCCACTGCTGGCCTCACGCCGTCTGATTGGCTGCAGCTCTCCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS CCA 90 bp CAGCCAATCAGACGGCGTGAGGCCAGCAGTGGGTGCGGCTGCGCTTaGCGCTGCGCATATCCGAATACCAGGAAGTGCCCGGTTTCGCTG +
Preference number: 5 (lower is better)
Translates to: QPIRRREASSGCGCA*RCAYPNTRKCPVSL
Trigger: CAGCGAAACCGGGCACTTCCTGGTATTCGGATATGCGCAGCGCCAAGCGCAGCCGCACCCACTGCTGGCCTCACGCCGTCTGATTGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS GCA 90 bp GGGTGCGGCTGCGCTTGGCGCTGCGCATATCCGAATACCAGGAAGTaGCCGGTTTCGCTGTCAGTGCTCGGGCAGCTAGAATCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GCGCAWRCAYPNTRK*PVSLSVLGQLESRS
Trigger: GGACCTGGATTCTAGCTGCCCGAGCACTGACAGCGAAACCGGGCACTTCCTGGTATTCGGATATGCGCAGCGCCAAGCGCAGCCGCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS GCA 90 bp ATCAGACGGCGTGAGGCCAGCAGTGGGTGCGGCTGCGCTTGGCGCTaGGCATATCCGAATACCAGGAAGTGCCCGGTTTCGCTGTCAGTG +
Preference number: 5 (lower is better)
Translates to: IRRREASSGCGCAWR*AYPNTRKCPVSLSV
Trigger: CACTGACAGCGAAACCGGGCACTTCCTGGTATTCGGATATGCGCAGCGCCAAGCGCAGCCGCACCCACTGCTGGCCTCACGCCGTCTGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CAA 90 bp GCAGGGCTGGCCTCACAACAACTCCTCTCCTACATTGTCAGGACAGGGAAGGAGGGCTGCACCGCGGCCTaGGATCTGCTGCTCCCGTCC +
Preference number: 5 (lower is better)
Translates to: AGLASQQLLSYIVRTGKEGCTAA*DLLLPS
Trigger: GGACGGGAGCAGCAGATCCAAGGCCGCGGTGCAGCC...CTCCTTCCCTGTCCTGACAATGTAGGAGAGGAGTTGTTGTGAGGCCAGCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGAAGCTGCCTGCCACCTaGACTTTGCCTCGAGCTCTC +
Preference number: 5 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRKLPAT*TLPRAL
Trigger: GAGAGCTCGAGGCAAAGTCAAGGTGGCAGGCAGCTT...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CAA 90 bp CCTCTGCCCACAGACTCCTGCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCACGGCCGTGCATTCATaGGCTGCACCGCGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: PLPTDSCRHKPRNSANSSTAVHS*AAPRPW
Trigger: CCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGT...GCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGCAGGAGTCTGTGGGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CAA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGACATGGTGTGGCTGCTaGTGGTGCCCAGACTTGGTT +
Preference number: 5 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRTWCGC*WCPDLV
Trigger: AACCAAGTCTGGGCACCACAAGCAGCCACACCATGT...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGGCTGGCTGGGGATTTTaGAGATCCCACTGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRAGWGF*RSHCRN
Trigger: GTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGC...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS TCA 90 bp GGGCAACCGTGGGACAAGAAGAAAGAAAAGGTCCACTTGGGAGGTTaGGACGGGCACTGGAGGGCCTCTCCTAAGGCAAGCCTTGCCGGA +
Preference number: 5 (lower is better)
Translates to: GQPWDKKKEKVHLGG*DGHWRASPKASLAG
Trigger: TCCGGCAAGGCTTGCCTTAGGAGAGGCCCTCCAGTGCCCGTCTCAACCTCCCAAGTGGACCTTTTCTTTCTTCTTGTCCCACGGTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS GCA 90 bp GGGCACTGGAGGGCCTCTCCTAAGGCAAGCCTTGCCGGAGCACAGTaGTCAGGAAAAGTCCTTGAGGACTCAGTCGTGCAATCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: GHWRASPKASLAGAQ*SGKVLEDSVVQSEL
Trigger: CAGCTCAGATTGCACGACTGAGTCCTCAAGGACTTTTCCTGAGCACTGTGCTCCGGCAAGGCTTGCCTTAGGAGAGGCCCTCCAGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS CCA 90 bp CCATCCCAGGGCAACCGTGGGACAAGAAGAAAGAAAAGGTCCACTTaGGAGGTTGAGACGGGCACTGGAGGGCCTCTCCTAAGGCAAGCC +
Preference number: 5 (lower is better)
Translates to: PSQGNRGTRRKKRST*EVETGTGGPLLRQA
Trigger: GGCTTGCCTTAGGAGAGGCCCTCCAGTGCCCGTCTCAACCTCCCAAGTGGACCTTTTCTTTCTTCTTGTCCCACGGTTGCCCTGGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS CCA 90 bp GTGTGTGAAGGCCAAGGACAGAGCAGTCTGCTCTGGTCTGGACTATaGCAGTGCCTCCATAGTCTTGGAGAGGAGCTGGAGGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: VCEGQGQSSLLWSGL*QCLHSLGEELEAGE
Trigger: CTCCCCAGCCTCCAGCTCCTCTCCAAGACTATGGAGGCACTGCCATAGTCCAGACCAGAGCAGACTGCTCTGTCCTTGGCCTTCACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS-3UTR CAA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTAGGAATGGACCTCAGGTaGGCTCTGGAGCCCGTGCCA +
Preference number: 5 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLGMDLR*ALEPVP
Trigger: TGGCACGGGCTCCAGAGCCAACCTGAGGTCCATTCC...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp AGAAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGTGGGTGCGGCTGCGCTaGGCGCTGCGCATATCCGAA +
Preference number: 5 (lower is better)
Translates to: RKERNCLGESFSQAGVQWWVRLR*ALRISE
Trigger: TTCGGATATGCGCAGCGCCAAGCGCAGCCGCACCCA...CCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CAA 90 bp GCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACTCAATTGGCTGCACCGCGGCCTaGGAAGCCTCCGTGGATGAC +
Preference number: 5 (lower is better)
Translates to: ATNTVGQPVSLPKPLYSIGCTAA*EASVDD
Trigger: GTCATCCACGGAGGCTTCCAAGGCCGCGGTGCAGCC...AATTGAGTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432485.1
CDS CCA 90 bp TCTTTGCCCTATCCAAGATCCCAGATGCCACAGAACCTCCTGCTGTaGAGTCCACTAGCCCACATCGCCCAGGCTCACTCCCATGATCCA +
Preference number: 5 (lower is better)
Translates to: SLPYPRSQMPQNLLL*SPLAHIAQAHSHDP
Trigger: TGGATCATGGGAGTGAGCCTGGGCGATGTGGGCTAGTGGACTCCACAGCAGGAGGTTCTGTGGCATCTGGGATCTTGGATAGGGCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS-3UTR CAA 90 bp AATGAGCCAGTGAGACCACACAGGACAGGACGCCAGGTCCCCCTCCCTAGGCCACCAGTTTCTCTTGCCTaGCACCACAATCCAGTAGAT +
Preference number: 5 (lower is better)
Translates to: NEPVRPHRTGRQVPLPRPPVSLA*HHNPVD
Trigger: ATCTACTGGATTGTGGTGCAAGGCAAGAGAAACTGG...TGGCCTAGGGAGGGGGACCTGGCGTCCTGTCCTGTGTGGTCTCACTGGCTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTAGCCACAATGCTGTCCTaGGCCAGCTTTGCTAGGGTG +
Preference number: 5 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLATMLS*ASFARV
Trigger: CACCCTAGCAAAGCTGGCCAAGGACAGCATTGTGGC...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp GGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACATCGGTGCCCAGACTTGGTaGCCGCTTGCAGTGAGGGGA +
Preference number: 5 (lower is better)
Translates to: GICPPSLCLQCFSDHFNIGAQTW*PLAVRG
Trigger: TCCCCTCACTGCAAGCGGCAACCAAGTCTGGGCACC...GATGTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CAA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGTTGTGGTGCCCAGACTaGGTTGCCGCTTGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: ETEEVAGCRSGPFPGERELWCPD*VAACSE
Trigger: CTCACTGCAAGCGGCAACCAAGTCTGGGCACCACAA...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGTTGTGGTGCCCAGACTaGGTTGCCGCTTGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: AETEEVAGCRSGPFPGERLWCPD*VAACSE
Trigger: CTCACTGCAAGCGGCAACCAAGTCTGGGCACCACAA...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp GCAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGAAGCTGCCTGCCACCTaGACTTTGCCTCGAGCTCTC +
Preference number: 5 (lower is better)
Translates to: AETEEVAGCRSGPFPGERKLPAT*TLPRAL
Trigger: GAGAGCTCGAGGCAAAGTCAAGGTGGCAGGCAGCTT...CCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CAA 90 bp GAAGCGGGCTGCCTGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCGCTGGCTGGGGATTTTaGAGATCCCACTGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: EAGCLESHKYCGSACITAAGWGF*RSHCRN
Trigger: GTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGC...GGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCAGGCAGCCCGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS CCA 90 bp GCTATGGAGGCTGGAGACCGTAACCCTTTCAGGCCCTGTGTAAACTaGGTCATGAAGAGCCTCTGCATGGTAGGCATGTGGCTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: AMEAGDRNPFRPCVN*VMKSLCMVGMWLEK
Trigger: CTTCTCCAGCCACATGCCTACCATGCAGAGGCTCTTCATGACCCAGTTTACACAGGGCCTGAAAGGGTTACGGTCTCCAGCCTCCATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
ENST00000492705.1
CDS-3UTR CAA 90 bp GAATTCCAGCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGTTCATCTGGTCTGTTTaGGTTACTCTGACAGTCAAG +
Preference number: 5 (lower is better)
Translates to: EFQPGDGATAVHSLAAPRFIWSV*VTLTVK
Trigger: CTTGACTGTCAGAGTAACCAAAACAGACCAGATGAA...CCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGCTGGAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GCCTGGAGACGGAGCGACGGCCGTGCATTCATTGGCTGCACCGCGGCCTTGGATTCAAATTGCATTTCTTaGGACTACCACAAGGTAGTG +
Preference number: 5 (lower is better)
Translates to: AWRRSDGRAFIGCTAALDSNCIS*DYHKVV
Trigger: CACTACCTTGTGGTAGTCCAAAGAAATGCAATTTGA...ATCCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGTCGCTCCGTCTCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GGGGCGCTGGGACTCATGAGTAGCTGCTATACTTTGGGATCTGTCCCCCATCCCAGAGAACAGAAGACCTaGTCTGCTATGGAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: GALGLMSSCYTLGSVPHPREQKT*SAMEAG
Trigger: TCCAGCCTCCATAGCAGACAAGGTCTTCTGTTCTCT...GGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCATGAGTCCCAGCGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CAA 90 bp TCTCAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCGGTGCCCAGACTTGGTaGCCGCTTGCAGTGAGGGGA +
Preference number: 5 (lower is better)
Translates to: SQQPDDCSCSSSLAKKVSGAQTW*PLAVRG
Trigger: TCCCCTCACTGCAAGCGGCAACCAAGTCTGGGCACC...GGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS TCA 90 bp CCTGAGCTGACCAGCAGATCCTTTTGGTTGTGGTTTACCTCCCCGTaGGGCTCGGTGACAGTCTCTCTCTGGTCACTACTTAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: PELTSRSFWLWFTSP*GSVTVSLWSLLSIS
Trigger: GGAGATGCTAAGTAGTGACCAGAGAGAGACTGTCACCGAGCCTCACGGGGAGGTAAACCACAACCAAAAGGATCTGCTGGTCAGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 90 bp GAGGAGCCTGAGTGTGGGTCTGACTATGGACGCCAGTGTCTTCCCTaGATGTTGCCATCCCAGGGCAACCGTGGGACAAGAAGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: EEPECGSDYGRQCLP*MLPSQGNRGTRRKK
Trigger: TTTCTTTCTTCTTGTCCCACGGTTGCCCTGGGATGGCAACATTCAGGGAAGACACTGGCGTCCATAGTCAGACCCACACTCAGGCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS-3UTR CAA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTAGATGTGGATCTTCCTTaGCTCCCTCAGAGGGTTCTC +
Preference number: 5 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLDVDLP*LPQRVL
Trigger: GAGAACCCTCTGAGGGAGCAAAGGAAGATCCACATC...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp CCTCTGCCCACAGACTCCTGCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCACTCCTGGAGTCCTCTaGAAATGCCAGTTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: PLPTDSCRHKPRNSANSSTPGVL*KCQFLL
Trigger: CAAGAGAAACTGGCATTTCAAGAGGACTCCAGGAGT...GCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGCAGGAGTCTGTGGGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp CAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCGAAGTCTGTGCGCTTTaGTGGGGATGGGATTGGAAG +
Preference number: 5 (lower is better)
Translates to: QTWNLRAHCTRWPAQRGPEVCAL*WGWDWK
Trigger: CTTCCAATCCCATCCCCACAAAAGCGCACAGACTTC...GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp CAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGGAAGTCTGTGCGCTTTaGTGGGGATGGGATTGGAAG +
Preference number: 5 (lower is better)
Translates to: QRLRRWLDVVQVHFQEKGEVCAL*WGWDWK
Trigger: CTTCCAATCCCATCCCCACAAAAGCGCACAGACTTC...CCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp ATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACATCTCCCTCCTAAGGCAAGCCTaGCCGGAGCACAGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: ICPPSLCLQCFSDHFNISLLRQA*PEHSAQ
Trigger: CTGAGCACTGTGCTCCGGCAAGGCTTGCCTTAGGAG...GGAGATGTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CAA 90 bp CTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACATGGGTCCACTTGGGAGGTaGAGACGGGCACTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: LMSYTRSWRWGRDCLKHMGPLGR*RRALEG
Trigger: GCCCTCCAGTGCCCGTCTCAACCTCCCAAGTGGACC...CATGTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GGGAGCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGAGTGCCTCCATAGTCTaGGAGAGGAGCTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GSRIWTHRTSVEKEQDLESASIV*ERSWRL
Trigger: CAGCCTCCAGCTCCTCTCCAAGACTATGGAGGCACT...CTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GAAGGCTGGCTGGGGATTTTTGAGATCCCACTGCAGGAACACATCTCTGGGTCTTATTTGGCCATGGCCTaGGAAGCCTCCGTGGATGAC +
Preference number: 5 (lower is better)
Translates to: EGWLGIFEIPLQEHISGSYLAMA*EASVDD
Trigger: GTCATCCACGGAGGCTTCCAAGGCCATGGCCAAATA...AGACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 90 bp CCAGCAGATCCTTTTGGTTGTGGTTTACCTCCCCGTGAGGCTCGGTaGCAGTCTCTCTCTGGTCACTACTTAGCATCTCCTTGGCTGACT +
Preference number: 5 (lower is better)
Translates to: PADPFGCGLPPREAR*QSLSGHYLASPWLT
Trigger: AGTCAGCCAAGGAGATGCTAAGTAGTGACCAGAGAGAGACTGTCACCGAGCCTCACGGGGAGGTAAACCACAACCAAAAGGATCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 90 bp GCCATTGGAAGAAGTTCAGAGGAACACCGTCGGTATCTTAGCTTCTaGGTCTTCATGGCTGGGGCCAGTTTGGAGGCAAGGATGGACAGC +
Preference number: 5 (lower is better)
Translates to: AIGRSSEEHRRYLSF*VFMAGASLEARMDS
Trigger: GCTGTCCATCCTTGCCTCCAAACTGGCCCCAGCCATGAAGACTCAGAAGCTAAGATACCGACGGTGTTCCTCTGAACTTCTTCCAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS GCA 90 bp TTGCACACACACACGCACACGCGCACACACACGCTGAGTCTCATGTaGTTACCTCGTCTGACTGCCGCTGGTGTTATATGTAGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: LHTHTHTRTHTLSLM*LPRLTAAGVICSFH
Trigger: ATGGAAGCTACATATAACACCAGCGGCAGTCAGACGAGGTAAGCACATGAGACTCAGCGTGTGTGTGCGCGTGTGCGTGTGTGTGTGCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492705.1
CDS CCA 90 bp GGATCTTCCTTTGCTCCCTCAGAGGGTTCTCTTATAATTCCTGCCTaGCCCCCTGGATCTCTGAAGACCTTTGGCTCCATGCTCTCGCTT +
Preference number: 5 (lower is better)
Translates to: GSSFAPSEGSLIIPA*PPGSLKTFGSMLSL
Trigger: AAGCGAGAGCATGGAGCCAAAGGTCTTCAGAGATCCAGGGGGCCAGGCAGGAATTATAAGAGAACCCTCTGAGGGAGCAAAGGAAGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS CCA 90 bp AAAGTGCTAGAAGTGTGTGAAGGCCAAGGACAGAGCAGTCTGCTCTaGTCTGGACTATGGCAGTGCCTCCATAGTCTTGGAGAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: KVLEVCEGQGQSSLL*SGLWQCLHSLGEEL
Trigger: CAGCTCCTCTCCAAGACTATGGAGGCACTGCCATAGTCCAGACCAGAGCAGACTGCTCTGTCCTTGGCCTTCACACACTTCTAGCACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS-3UTR CAA 90 bp ACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCCCTCTGCTTCTCTCTTATTaGAGCGCAGCCTGGAATGTA +
Preference number: 5 (lower is better)
Translates to: TWNLRAHCTRWPAQRGPPLLLSY*SAAWNV
Trigger: TACATTCCAGGCTGCGCTCAAATAAGAGAGAAGCAG...AGGGGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGATGGTGGACTCATCTTaGTCAGCCTTCGGTTGGTTC +
Preference number: 5 (lower is better)
Translates to: ETEEVAGCRSGPFPGEREMVDSS*SAFGWF
Trigger: GAACCAACCGAAGGCTGACAAAGATGAGTCCACCAT...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAGCAGAGGAGGGGTCTaGTGCTTTCCGAGGGGCACC +
Preference number: 5 (lower is better)
Translates to: TVNKAELSYGRANPVCPWSRGGV*CFPRGT
Trigger: GGTGCCCCTCGGAAAGCACAAGACCCCTCCTCTGCT...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp AAAGTCAGAGAGAAGCATTTAGTGTCTAAGAACCCTGTCCCAGGAAGGGAGAGGATGGCTGGGGCCAGTTaGGAGGCAAGGATGGACAGC +
Preference number: 5 (lower is better)
Translates to: KVREKHLVSKNPVPGRERMAGAS*EARMDS
Trigger: GCTGTCCATCCTTGCCTCCAAACTGGCCCCAGCCAT...CCTCTCCCTTCCTGGGACAGGGTTCTTAGACACTAAATGCTTCTCTCTGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp AAAGTCAGAGAGAAGCATTTAGTGTCTAAGAACCCTGTCCCAGGAAGGGAGAGGCTCCTAAGGCAAGCCTaGCCGGAGCACAGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: KVREKHLVSKNPVPGRERLLRQA*PEHSAQ
Trigger: CTGAGCACTGTGCTCCGGCAAGGCTTGCCTTAGGAG...CCTCTCCCTTCCTGGGACAGGGTTCTTAGACACTAAATGCTTCTCTCTGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp TTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACAGTGCCTCCATAGTCTaGGAGAGGAGCTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: FGICPPSLCLQCFSDHFNSASIV*ERSWRL
Trigger: CAGCCTCCAGCTCCTCTCCAAGACTATGGAGGCACT...GTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CAA 90 bp CAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGACCCTCTGTGAGACTTTCTTaGGCCTCTTCTCTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: QTWNLRAHCTRWPAQRGPSVRLS*ASSLAQ
Trigger: CTGAGCCAGAGAAGAGGCCAAAGAAAGTCTCACAGA...GGGTCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CAA 90 bp AGAAAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCCCCCATCCCTGTGTTaGCAGTGTTTCAGCGACCAT +
Preference number: 5 (lower is better)
Translates to: RKERNCLGESFSQAGVQWPPSLC*QCFSDH
Trigger: ATGGTCGCTGAAACACTGCAAACACAGGGATGGGGG...CCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS TCA 90 bp CCAATCCACGAACCTGGAACTCAGAGGCTGAAAGCAGGAGCTTGCTaGCAGCTGATTCTGCTACCAAGCAAGACTTTGGTACCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: PIHEPGTQRLKAGAC*QLILLPSKTLVPRQ
Trigger: CTGCCTTGGTACCAAAGTCTTGCTTGGTAGCAGAATCAGCTGTCAGCAAGCTCCTGCTTTCAGCCTCTGAGTTCCAGGTTCGTGGATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
ENST00000432485.1
CDS GCA 90 bp ATGTGGATCTTCCTTTGCTCCCTCAGAGGGTTCTCTTATAATTCCTaGCTGGCCCCCTGGATCTCTGAAGACCTTTGGCTCCATGCTCTC +
Preference number: 5 (lower is better)
Translates to: MWIFLCSLRGFSYNS*LAPWISEDLWLHAL
Trigger: GAGAGCATGGAGCCAAAGGTCTTCAGAGATCCAGGGGGCCAGGCAGGAATTATAAGAGAACCCTCTGAGGGAGCAAAGGAAGATCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS CCA 90 bp AAGAGATTTCGAAGGAGCAGACAGAAGGACCATGCTGGCTCCAAATaGATAGGACTCTGCCCACCGAGTAGGGCAGAGAACAGAAGACCT +
Preference number: 5 (lower is better)
Translates to: KRFRRSRQKDHAGSK*IGLCPPSRAENRRP
Trigger: AGGTCTTCTGTTCTCTGCCCTACTCGGTGGGCAGAGTCCTATCCATTTGGAGCCAGCATGGTCCTTCTGTCTGCTCCTTCGAAATCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
ENST00000492705.1
CDS-3UTR CAA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGCTGAATCCTGACCAGTaGTTCCTGTATGTGCAGCAT +
Preference number: 5 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLLNPDQ*FLYVQH
Trigger: ATGCTGCACATACAGGAACAACTGGTCAGGATTCAG...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAAGCAGAGGAGGGGTCTaGTGCTTTCCGAGGGGCACC +
Preference number: 5 (lower is better)
Translates to: TKRNFHMDVQILCVLGILSRGGV*CFPRGT
Trigger: GGTGCCCCTCGGAAAGCACAAGACCCCTCCTCTGCT...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp GGACAGGACGCCAGGTCCCCCTCCCTAGGCCACGTTTCTAATAATCTTGGTCTAAAAGGCACCATGTATTaGATCACACCCAGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: GQDARSPSLGHVSNNLGLKGTMY*ITPSRG
Trigger: TCCTCTGCTGGGTGTGATCAAATACATGGTGCCTTT...TAGACCAAGATTATTAGAAACGTGGCCTAGGGAGGGGGACCTGGCGTCCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp CAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAAAGGCACCATGTATTaGATCACACCCAGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: QRLRRWLDVVQVHFQEKGKGTMY*ITPSRG
Trigger: TCCTCTGCTGGGTGTGATCAAATACATGGTGCCTTT...CCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp AAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCAGCAGGGACGGCATCTaGTTGCTCAAATCTATGAAG +
Preference number: 5 (lower is better)
Translates to: KERNCLGESFSQAGVQWRSRDGI*LLKSMK
Trigger: CTTCATAGATTTGAGCAACAAGATGCCGTCCCTGCT...GCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CAA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGCTCCTAAGGCAAGCCTaGCCGGAGCACAGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: TVNKAELSYGRANPVCPWLLRQA*PEHSAQ
Trigger: CTGAGCACTGTGCTCCGGCAAGGCTTGCCTTAGGAG...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp TGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAGGTCCACTTGGGAGGTaGAGACGGGCACTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: CSSSLAKKVSSSISFCIKGPLGR*RRALEG
Trigger: GCCCTCCAGTGCCCGTCTCAACCTCCCAAGTGGACC...TTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CAA 90 bp CTCAGGCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTAGAGAACAGAAGACCTaGTCTGCTATGGAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: LRLRIRQTLHVFTVPPSAREQKT*SAMEAG
Trigger: TCCAGCCTCCATAGCAGACAAGGTCTTCTGTTCTCT...AGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp ATGAGTAGCTGCTATACTTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTTGTGGTGCCCAGACTaGGTTGCCGCTTGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: MSSCYTLGSVPHPCVCSVLWCPD*VAACSE
Trigger: CTCACTGCAAGCGGCAACCAAGTCTGGGCACCACAA...AACACTGCAAACACAGGGATGGGGGACAGATCCCAAAGTATAGCAGCTACTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CAA 90 bp TTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACACATGGTGTGGCTGCTaGTGGTGCCCAGACTTGGTT +
Preference number: 5 (lower is better)
Translates to: FGICPPSLCLQCFSDHFNTWCGC*WCPDLV
Trigger: AACCAAGTCTGGGCACCACAAGCAGCCACACCATGT...GTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CAA 90 bp AAAGAGAGAAACTGCTTAGGCGAGTCTTTCTCCCAGGCTGGAGTGCAGTGGCGCTTCTTCTTTAACCTTTaGGGTCGAGGAAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: KERNCLGESFSQAGVQWRFFFNL*GRGRPM
Trigger: CATGGGCCTTCCTCGACCCAAAAGGTTAAAGAAGAA...GCGCCACTGCACTCCAGCCTGGGAGAAAGACTCGCCTAAGCAGTTTCTCTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CAA 90 bp CAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGTTCTTCTTTAACCTTTaGGGTCGAGGAAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: QRLRRWLDVVQVHFQEKGFFFNL*GRGRPM
Trigger: CATGGGCCTTCCTCGACCCAAAAGGTTAAAGAAGAA...CCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS CCA 90 bp TTCTCTTATAATTCCTGCCTGGCCCCCTGGATCTCTGAAGACCTTTaGCTCCATGCTCTCGCTTCTCTTTGCCCTATCCAAGATCCCAGA +
Preference number: 5 (lower is better)
Translates to: FSYNSCLAPWISEDL*LHALASLCPIQDPR
Trigger: TCTGGGATCTTGGATAGGGCAAAGAGAAGCGAGAGCATGGAGCCAAAGGTCTTCAGAGATCCAGGGGGCCAGGCAGGAATTATAAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS-3UTR CAA 90 bp GCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACTCAATTTGCTCTCGCTTCTCTTaGCCCTATCCAAGATCCCAG +
Preference number: 5 (lower is better)
Translates to: ATNTVGQPVSLPKPLYSICSRFS*PYPRSQ
Trigger: CTGGGATCTTGGATAGGGCAAAGAGAAGCGAGAGCA...AATTGAGTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACTGGGCTCTACAGGGGTaGTCTGTCCTGCCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHWALQG*SVLPLQ
Trigger: TTGAAGAGGCAGGACAGACAACCCCTGTAGAGCCCA...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GAAGCGGGCTGCCTGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCGCAGTAGAGAGTCAGTaGGCAAATTTGCATGTTCTT +
Preference number: 5 (lower is better)
Translates to: EAGCLESHKYCGSACITAAVESQ*ANLHVL
Trigger: AAGAACATGCAAATTTGCCAACTGACTCTCTACTGC...GGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCAGGCAGCCCGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTACTGTCAAGAAGGCAAGGACTaGTGCATGACTCAGTGTCCT +
Preference number: 5 (lower is better)
Translates to: APNKANATCLHRTSLSYCQEGKD*CMTQCP
Trigger: AGGACACTGAGTCATGCACAAGTCCTTGCCTTCTTG...ACAGTAGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTAGGGACGGCATCTTGTaGCTCAAATCTATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPRDGIL*LKSMKV
Trigger: GACCTTCATAGATTTGAGCAACAAGATGCCGTCCCT...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTAGCAGGGACGGCATCTaGTTGCTCAAATCTATGAAG +
Preference number: 5 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPSRDGI*LLKSMK
Trigger: CTTCATAGATTTGAGCAACAAGATGCCGTCCCTGCT...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp CAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCAGAGAACAGAAGACCTaGTCTGCTATGGAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: QPDDCSCSSSLAKKVSSSREQKT*SAMEAG
Trigger: TCCAGCCTCCATAGCAGACAAGGTCTTCTGTTCTCT...GGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CAA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGGGTGCCCAGACTTGGTaGCCGCTTGCAGTGAGGGGA +
Preference number: 5 (lower is better)
Translates to: FHMDVQILCVLGILVLLKGAQTW*PLAVRG
Trigger: TCCCCTCACTGCAAGCGGCAACCAAGTCTGGGCACC...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp TCTTCCATGCAGCGATCAACTGGGTCAAATGCCTATCATGTATTCTTAAGACATACGGCCGTGCATTCATaGGCTGCACCGCGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SSMQRSTGSNAYHVFLRHTAVHS*AAPRPW
Trigger: CCAAGGCCGCGGTGCAGCCAATGAATGCACGGCCGT...ATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CAA 90 bp ATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACATCTCCAGTAGCTGCTATACTTaGGGATCTGTCCCCCATCCC +
Preference number: 5 (lower is better)
Translates to: ICPPSLCLQCFSDHFNISSSCYT*GSVPHP
Trigger: GGGATGGGGGACAGATCCCAAAGTATAGCAGCTACT...GGAGATGTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS GCA 90 bp AGGGGTCTTGTGCTTTCCGAGGGGCACCAAGAAGGCAAGGACTTGTaGATGACTCAGTGTCCTTCCTTAATGGATGATGTAACCTTTCCT +
Preference number: 5 (lower is better)
Translates to: RGLVLSEGHQEGKDL*MTQCPSLMDDVTFP
Trigger: AGGAAAGGTTACATCATCCATTAAGGAAGGACACTGAGTCATGCACAAGTCCTTGCCTTCTTGGTGCCCCTCGGAAAGCACAAGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS CCA 90 bp ACCGTCGGTATCTTAGCTTCTGAGTCTTCATGGCTGGGGCCAGTTTaGAGGCAAGGATGGACAGCTTGTTTAGTAAGGCTGATTCTTTGG +
Preference number: 5 (lower is better)
Translates to: TVGILASESSWLGPV*RQGWTACLVRLILW
Trigger: CCAAAGAATCAGCCTTACTAAACAAGCTGTCCATCCTTGCCTCCAAACTGGCCCCAGCCATGAAGACTCAGAAGCTAAGATACCGACGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS CCA 90 bp GAAGTTCAGAGGAACACCGTCGGTATCTTAGCTTCTGAGTCTTCATaGCTGGGGCCAGTTTGGAGGCAAGGATGGACAGCTTGTTTAGTA +
Preference number: 5 (lower is better)
Translates to: EVQRNTVGILASESS*LGPVWRQGWTACLV
Trigger: TACTAAACAAGCTGTCCATCCTTGCCTCCAAACTGGCCCCAGCCATGAAGACTCAGAAGCTAAGATACCGACGGTGTTCCTCTGAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTGATTTTGTCTACTTCTaGGAATTCACCGCATCCAGC +
Preference number: 5 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPDFVYF*EFTASS
Trigger: GCTGGATGCGGTGAATTCCAAGAAGTAGACAAAATC...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GAAGGCTGGCTGGGGATTTTTGAGATCCCACTGCAGGAACACATCTCTGGGTCTATGTGTAGAACTGGGTaGTTCATTATGGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: EGWLGIFEIPLQEHISGSMCRTG*FIMVAM
Trigger: CATGGCCACCATAATGAACAACCCAGTTCTACACAT...AGACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GCTTTAACAGGAGATGAGGTACAGCTGAACTCATGGAGACATGAAGCTGGAAAGAGAGTGTCCTGTTCCTaGGCAGCAGTGATCACGGTG +
Preference number: 5 (lower is better)
Translates to: ALTGDEVQLNSWRHEAGKRVSCS*AAVITV
Trigger: CACCGTGATCACTGCTGCCAAGGAACAGGACACTCT...CTTTCCAGCTTCATGTCTCCATGAGTTCAGCTGTACCTCATCTCCTGTTAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GAAGCGGGCTGCCTGGAAAGCCACAAATACTGTGGGTCAGCCTGTATCACTGCCAGATGTTCCTTTATCTaGCTGTCCATAATGGCTATC +
Preference number: 5 (lower is better)
Translates to: EAGCLESHKYCGSACITARCSFI*LSIMAI
Trigger: GATAGCCATTATGGACAGCAAGATAAAGGAACATCT...GGCAGTGATACAGGCTGACCCACAGTATTTGTGGCTTTCCAGGCAGCCCGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GCAGGGCTGGCCTCACAACAACTCCTCTCCTACATTGTCAGGACAGGGAAGGAGTCCTTCAGTCATTTCTaGTGTTTCTCTGAGAGATGT +
Preference number: 5 (lower is better)
Translates to: AGLASQQLLSYIVRTGKESFSHF*CFSERC
Trigger: ACATCTCTCAGAGAAACACAAGAAATGACTGAAGGA...CTCCTTCCCTGTCCTGACAATGTAGGAGAGGAGTTGTTGTGAGGCCAGCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTGCTAGGGTGATTTCATaGATCATGGTGGACTCATCT +
Preference number: 5 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPARVIS*IMVDSS
Trigger: AGATGAGTCCACCATGATCAATGAAATCACCCTAGC...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAGCCACAATGCTGTCCTaGGCCAGCTTTGCTAGGGTG +
Preference number: 5 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLEATMLS*ASFARV
Trigger: CACCCTAGCAAAGCTGGCCAAGGACAGCATTGTGGC...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp TCTCAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCCAAGAAGGCAAGGACTaGTGCATGACTCAGTGTCCT +
Preference number: 5 (lower is better)
Translates to: SQQPDDCSCSSSLAKKVSQEGKD*CMTQCP
Trigger: AGGACACTGAGTCATGCACAAGTCCTTGCCTTCTTG...GGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CAA 90 bp TTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACTCTGTGAGACTTTCTTaGGCCTCTTCTCTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: FGICPPSLCLQCFSDHFNSVRLS*ASSLAQ
Trigger: CTGAGCCAGAGAAGAGGCCAAAGAAAGTCTCACAGA...GTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS TCA 90 bp GCAGCATCCAGTTCTCTCCGAGACAAGGTACTCCTGGAGTCCTCTTaGAATGCCAGTTTCTCTTGCCTTGCACCACAATCCAGTAGATTA +
Preference number: 5 (lower is better)
Translates to: AASSSLRDKVLLESS*NASFSCLAPQSSRL
Trigger: TAATCTACTGGATTGTGGTGCAAGGCAAGAGAAACTGGCATTTCAAGAGGACTCCAGGAGTACCTTGTCTCGGAGAGAACTGGATGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 90 bp AGGCTCCTCAAGGGATGGCACGGTGTAGACATCTGCTTTGGTATGTaGCTAACCAAGCTCTTGGTAGGTGCTGTTTCAGGTTCTAATCGT +
Preference number: 5 (lower is better)
Translates to: RLLKGWHGVDICFGM*LTKLLVGAVSGSNR
Trigger: ACGATTAGAACCTGAAACAGCACCTACCAAGAGCTTGGTTAGTCACATACCAAAGCAGATGTCTACACCGTGCCATCCCTTGAGGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS TCA 90 bp GTCCTTGAGGACTCAGTCGTGCAATCTGAGCTGGATGATTTCACATaGAAGGATACTGGGAAGATTTCAGAACCAAACAGCAGGGACGGC +
Preference number: 5 (lower is better)
Translates to: VLEDSVVQSELDDFT*KDTGKISEPNSRDG
Trigger: GCCGTCCCTGCTGTTTGGTTCTGAAATCTTCCCAGTATCCTTTCATGTGAAATCATCCAGCTCAGATTGCACGACTGAGTCCTCAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS GCA 90 bp TTGCCGGAGCACAGTGCTCAGGAAAAGTCCTTGAGGACTCAGTCGTaGAATCTGAGCTGGATGATTTCACATGAAAGGATACTGGGAAGA +
Preference number: 5 (lower is better)
Translates to: LPEHSAQEKSLRTQS*NLSWMISHERILGR
Trigger: TCTTCCCAGTATCCTTTCATGTGAAATCATCCAGCTCAGATTGCACGACTGAGTCCTCAAGGACTTTTCCTGAGCACTGTGCTCCGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS CCA 90 bp TTCCTGTATGTGCAGCATCCAGTTCTCTCCGAGACAAGGTACTCCTaGAGTCCTCTTGAAATGCCAGTTTCTCTTGCCTTGCACCACAAT +
Preference number: 5 (lower is better)
Translates to: FLYVQHPVLSETRYS*SPLEMPVSLALHHN
Trigger: ATTGTGGTGCAAGGCAAGAGAAACTGGCATTTCAAGAGGACTCCAGGAGTACCTTGTCTCGGAGAGAACTGGATGCTGCACATACAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp AAAGTCAGAGAGAAGCATTTAGTGTCTAAGAACCCTGTCCCAGGAAGGGAGAGGCATCTGGAATCACACTaGGCTCAGGGTCAGCATGAA +
Preference number: 5 (lower is better)
Translates to: KVREKHLVSKNPVPGRERHLESH*AQGQHE
Trigger: TTCATGCTGACCCTGAGCCAAGTGTGATTCCAGATG...CCTCTCCCTTCCTGGGACAGGGTTCTTAGACACTAAATGCTTCTCTCTGACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGAGCAGCTGTGGAATGTaGATGTGGATCTTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWSSCGM*MWIFLC
Trigger: GCAAAGGAAGATCCACATCAACATTCCACAGCTGCT...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTACTGTTTTCTTTCAAAGGGCTaGTGGCTGTGGGACTATCAT +
Preference number: 5 (lower is better)
Translates to: APNKANATCLHRTSLSYCFLSKG*WLWDYH
Trigger: ATGATAGTCCCACAGCCACAAGCCCTTTGAAAGAAA...ACAGTAGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp AAAGTCAGAGAGAAGCATTTAGTGTCTAAGAACCCTGTCCCAGGAAGGGAGAGGGGGCATCTCTGCCTGTaGCTAAAGGCATCTCTTTGT +
Preference number: 5 (lower is better)
Translates to: KVREKHLVSKNPVPGRERGHLCL*LKASLC
Trigger: ACAAAGAGATGCCTTTAGCAACAGGCAGAGATGCCC...CCTCTCCCTTCCTGGGACAGGGTTCTTAGACACTAAATGCTTCTCTCTGACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp CTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACATGAGAGGCACCACAGGTTaGGTTACCTGGTGGAGAGAT +
Preference number: 5 (lower is better)
Translates to: LMSYTRSWRWGRDCLKHMRGTTG*VTWWRD
Trigger: ATCTCTCCACCAGGTAACCAAACCTGTGGTGCCTCT...CATGTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp AGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCATTCCTCCAAAGGTACTTTCTTaGCCAAACTCAGAGTTTGGT +
Preference number: 5 (lower is better)
Translates to: RRWLDVVQVHFQEKGSIPPKVLS*PNSEFG
Trigger: ACCAAACTCTGAGTTTGGCAAAGAAAGTACCTTTGG...AGGAATGCTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTACTGTTTTGTCAGCCTTCGGTaGGTTCTGATTTTGTGCATC +
Preference number: 5 (lower is better)
Translates to: APNKANATCLHRTSLSYCFVSLR*VLILCI
Trigger: GATGCACAAAATCAGAACCAACCGAAGGCTGACAAA...ACAGTAGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp CAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCTTTGTCAGCCTTCGGTaGGTTCTGATTTTGTGCATC +
Preference number: 5 (lower is better)
Translates to: QPDDCSCSSSLAKKVSSSFVSLR*VLILCI
Trigger: GATGCACAAAATCAGAACCAACCGAAGGCTGACAAA...GGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CAA 90 bp TTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACAGGGACGGCATCTTGTaGCTCAAATCTATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: FGICPPSLCLQCFSDHFNRDGIL*LKSMKV
Trigger: GACCTTCATAGATTTGAGCAACAAGATGCCGTCCCT...GTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CAA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGAAGCAGGGACGGCATCTaGTTGCTCAAATCTATGAAG +
Preference number: 5 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRSRDGI*LLKSMK
Trigger: CTTCATAGATTTGAGCAACAAGATGCCGTCCCTGCT...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp TGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAAGTGCCTCCATAGTCTaGGAGAGGAGCTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: CSSSLAKKVSSSISFCIKSASIV*ERSWRL
Trigger: CAGCCTCCAGCTCCTCTCCAAGACTATGGAGGCACT...TTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CAA 90 bp GGGAGAGGTATTGAGGTGAAACATAGGTCGTGTCTATACAGTCTGGGCAAAGTGATGGACTGTGCATTTTaGAGTGGTTTGGCGGTAGGG +
Preference number: 5 (lower is better)
Translates to: GRGIEVKHRSCLYSLGKVMDCAF*SGLAVG
Trigger: CCCTACCGCCAAACCACTCAAAAATGCACAGTCCAT...CACTTTGCCCAGACTGTATAGACACGACCTATGTTTCACCTCAATACCTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGATCACTGCCCAAGCCGTaGTACTCAATTTTGTTACCT +
Preference number: 5 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRSLPKP*YSILLP
Trigger: AGGTAACAAAATTGAGTACAACGGCTTGGGCAGTGA...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CAA 90 bp GCTTTAACAGGAGATGAGGTACAGCTGAACTCATGGAGACATGAAGCTGGAAAGGTAACTTCCCACCACTaGGGGAGGGAAGTTCCCATA +
Preference number: 5 (lower is better)
Translates to: ALTGDEVQLNSWRHEAGKVTSHH*GREVPI
Trigger: TATGGGAACTTCCCTCCCCAAGTGGTGGGAAGTTAC...CTTTCCAGCTTCATGTCTCCATGAGTTCAGCTGTACCTCATCTCCTGTTAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 90 bp GCTCCAGGTTTTACATCTGGAATCACACTTGGCTCAGGGTCAGCATaGAGCTCTCTGGAGACACTTACTGGGAGTTCAGAGTATAATTCC +
Preference number: 5 (lower is better)
Translates to: APGFTSGITLGSGSA*SSLETLTGSSEYNS
Trigger: GGAATTATACTCTGAACTCCCAGTAAGTGTCTCCAGAGAGCTTCATGCTGACCCTGAGCCAAGTGTGATTCCAGATGTAAAACCTGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS TCA 90 bp ATTTCTTTGGACTACCACAAGGTAGTGAGTTATTACTGCCTGAGCTaGCCAGCAGATCCTTTTGGTTGTGGTTTACCTCCCCGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: ISLDYHKVVSYYCLS*PADPFGCGLPPREA
Trigger: AGCCTCACGGGGAGGTAAACCACAACCAAAAGGATCTGCTGGTCAGCTCAGGCAGTAATAACTCACTACCTTGTGGTAGTCCAAAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 90 bp CCATCCACTAGCTGCCAAATATGGATTCAGCTGCTCTGTGCTGGATaGAAATCCGTCCAGGAGTCTTTTATATCTGAGGCGCTTGTAGCT +
Preference number: 5 (lower is better)
Translates to: PSTSCQIWIQLLCAG*KSVQESFISEALVA
Trigger: AGCTACAAGCGCCTCAGATATAAAAGACTCCTGGACGGATTTTCATCCAGCACAGAGCAGCTGAATCCATATTTGGCAGCTAGTGGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS TCA 90 bp AAGATTAGGATCTGGCCTAGGAATGGTTTTCCGGATGCGAATCTGTaGGACTTTCTTTGGCCTCTTCTCTGGCTCAGCCTCTTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: KIRIWPRNGFPDANL*DFLWPLLWLSLFLF
Trigger: GAACAGAAAGAGGCTGAGCCAGAGAAGAGGCCAAAGAAAGTCTCACAGATTCGCATCCGGAAAACCATTCCTAGGCCAGATCCTAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000432485.1
CDS GCA 90 bp CTGCTCTACCCTCTAATGGAGGGTGATGGCTCTGATGGGCATCTCTaGCTGTTGCTAAAGGCATCTCTTTGTTTAAATGCAGTAGAGAGT +
Preference number: 5 (lower is better)
Translates to: LLYPLMEGDGSDGHL*LLLKASLCLNAVES
Trigger: ACTCTCTACTGCATTTAAACAAAGAGATGCCTTTAGCAACAGGCAGAGATGCCCATCAGAGCCATCACCCTCCATTAGAGGGTAGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CCA 90 bp CACTTACTGGGAGTTCAGAGTATAATTCCTGTACCACGGCAGACATaGAGGAATCAAGTGGAACTGGCTGAGTCTCTACTCCAGATGACA +
Preference number: 5 (lower is better)
Translates to: HLLGVQSIIPVPRQT*RNQVELAESLLQMT
Trigger: TGTCATCTGGAGTAGAGACTCAGCCAGTTCCACTTGATTCCTCCATGTCTGCCGTGGTACAGGAATTATACTCTGAACTCCCAGTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS CCA 90 bp CTGACTCGGGCTAGTCTTTTCTTCAGCAGCTGTGGAATGTTGATGTaGATCTTCCTTTGCTCCCTCAGAGGGTTCTCTTATAATTCCTGC +
Preference number: 5 (lower is better)
Translates to: LTRASLFFSSCGMLM*IFLCSLRGFSYNSC
Trigger: GCAGGAATTATAAGAGAACCCTCTGAGGGAGCAAAGGAAGATCCACATCAACATTCCACAGCTGCTGAAGAAAAGACTAGCCCGAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS CCA 90 bp AAAATTCAGGCTCCTCAAGGGATGGCACGGTGTAGACATCTGCTTTaGTATGTGACTAACCAAGCTCTTGGTAGGTGCTGTTTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: KIQAPQGMARCRHLL*YVTNQALGRCCFRF
Trigger: GAACCTGAAACAGCACCTACCAAGAGCTTGGTTAGTCACATACCAAAGCAGATGTCTACACCGTGCCATCCCTTGAGGAGCCTGAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGAAACTCTTCCTTCCCATaGTCCACATTAGAAATGGCA +
Preference number: 5 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRNSSFP*STLEMA
Trigger: TGCCATTTCTAATGTGGACAATGGGAAGGAAGAGTT...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GCTTTAACAGGAGATGAGGTACAGCTGAACTCATGGAGACATGAAGCTGGAAAGGTGGCCATGAAGCTGTaGGTGATTGTCATCTGCTTC +
Preference number: 5 (lower is better)
Translates to: ALTGDEVQLNSWRHEAGKVAMKL*VIVICF
Trigger: GAAGCAGATGACAATCACCAACAGCTTCATGGCCAC...CTTTCCAGCTTCATGTCTCCATGAGTTCAGCTGTACCTCATCTCCTGTTAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp CAACAAACATGGAATCTGAGAGCACACTGCACTAGATGGCCAGCTCAACGGGGAAGAGCAGTACCTTGCTaGGGTTTTAATACCTCACTT +
Preference number: 5 (lower is better)
Translates to: QQTWNLRAHCTRWPAQRGRAVPC*GFNTSL
Trigger: AAGTGAGGTATTAAAACCCAAGCAAGGTACTGCTCT...TCCCCGTTGAGCTGGCCATCTAGTGCAGTGTGCTCTCAGATTCCATGTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GGGAGCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGCAAAGAGTTATCAACTaGCAGGCTGATTTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: GSRIWTHRTSVEKEQDLEQRVIN*QADFAG
Trigger: TCCAGCAAAATCAGCCTGCAAGTTGATAACTCTTTG...CTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGGCTAGGGTGATTTCATaGATCATGGTGGACTCATCT +
Preference number: 5 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWARVIS*IMVDSS
Trigger: AGATGAGTCCACCATGATCAATGAAATCACCCTAGC...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GCTATGTCTGAGGCAGTGGGCCTAGAACATAGCCGTGGCACACTTTTCCCTCTGAGTAAGGCTGATTCTTaGGTAGTCTTCCTAAAATTC +
Preference number: 5 (lower is better)
Translates to: AMSEAVGLEHSRGTLFPLSKADS*VVFLKF
Trigger: GAATTTTAGGAAGACTACCAAAGAATCAGCCTTACT...CAGAGGGAAAAGTGTGCCACGGCTATGTTCTAGGCCCACTGCCTCAGACATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp CAGAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGTAAGGCTGATTCTTaGGTAGTCTTCCTAAAATTC +
Preference number: 5 (lower is better)
Translates to: QRLRRWLDVVQVHFQEKGSKADS*VVFLKF
Trigger: GAATTTTAGGAAGACTACCAAAGAATCAGCCTTACT...CCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp GCCACAAATACTGTGGGTCAGCCTGTATCACTGCCCAAGCCGTTGTACTCAATTGCAAGGATGGACAGCTaGTTTAGTAAGGCTGATTCT +
Preference number: 5 (lower is better)
Translates to: ATNTVGQPVSLPKPLYSIARMDS*FSKADS
Trigger: AGAATCAGCCTTACTAAACAAGCTGTCCATCCTTGC...AATTGAGTACAACGGCTTGGGCAGTGATACAGGCTGACCCACAGTATTTGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp TCTCAACAGCCTGATGATTGTTCCTGCTCCTCTTCCTTGGCAAAGAAGGTCTCCGCAAGGATGGACAGCTaGTTTAGTAAGGCTGATTCT +
Preference number: 5 (lower is better)
Translates to: SQQPDDCSCSSSLAKKVSARMDS*FSKADS
Trigger: AGAATCAGCCTTACTAAACAAGCTGTCCATCCTTGC...GGAGACCTTCTTTGCCAAGGAAGAGGAGCAGGAACAATCATCAGGCTGTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CAA 90 bp AATTCTAGAACTCGCTTCCTCTTCTGTTGGCTGATTGAGATTAGTGTACCATTTATGGCTGGGGCCAGTTaGGAGGCAAGGATGGACAGC +
Preference number: 5 (lower is better)
Translates to: NSRTRFLFCWLIEISVPFMAGAS*EARMDS
Trigger: GCTGTCCATCCTTGCCTCCAAACTGGCCCCAGCCAT...AAATGGTACACTAATCTCAATCAGCCAACAGAAGAGGAAGCGAGTTCTAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CAA 90 bp GCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAAACATGGTGTGGCTGCTaGTGGTGCCCAGACTTGGTT +
Preference number: 5 (lower is better)
Translates to: APLPWQRRSPVPLVSVSKTWCGC*WCPDLV
Trigger: AACCAAGTCTGGGCACCACAAGCAGCCACACCATGT...TTTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CAA 90 bp GAGACTGAGGAGGTGGCTGGATGTCGTTCAGGTCCATTTCCAGGAGAAAGGGAGCCGTTGTACTCAATTTaGTTACCTAACACCATTTCA +
Preference number: 5 (lower is better)
Translates to: ETEEVAGCRSGPFPGEREPLYSI*LPNTIS
Trigger: TGAAATGGTGTTAGGTAACAAAATTGAGTACAACGG...CTCCCTTTCTCCTGGAAATGGACCTGAACGACATCCAGCCACCTCCTCAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS TCA 90 bp AATTCCTGTACCACGGCAGACATGGAGGAATCAAGTGGAACTGGCTaGGTCTCTACTCCAGATGACAGCATTAGGACAGATGCAGATTAT +
Preference number: 5 (lower is better)
Translates to: NSCTTADMEESSGTG*VSTPDDSIRTDADY
Trigger: ATAATCTGCATCTGTCCTAATGCTGTCATCTGGAGTAGAGACTCAGCCAGTTCCACTTGATTCCTCCATGTCTGCCGTGGTACAGGAATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS GCA 90 bp AATATATTGGGCTCTACAGGGGTTGTCTGTCCTGCCTCTTCAATCTaGATCAAGGAGGAAAAACTGCTTTCTTCAGAGTGTCCACCAGGA +
Preference number: 5 (lower is better)
Translates to: NILGSTGVVCPASSI*IKEEKLLSSECPPG
Trigger: TCCTGGTGGACACTCTGAAGAAAGCAGTTTTTCCTCCTTGATGCAGATTGAAGAGGCAGGACAGACAACCCCTGTAGAGCCCAATATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS GCA 90 bp AAGGCAAATGTCTGTCAGAGGAATTCTCGTGAGGGTGACAAGCTTTaGAAGCATTCTTTTCCACACAGGTACATACGCTGTCTCTGTCAC +
Preference number: 5 (lower is better)
Translates to: KANVCQRNSREGDKL*KHSFPHRYIRCLCH
Trigger: GTGACAGAGACAGCGTATGTACCTGTGTGGAAAAGAATGCTTGCAAAGCTTGTCACCCTCACGAGAATTCCTCTGACAGACATTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS GCA 90 bp CTGAGAGACATAGATCAGGTTTACAAGGACAAGAGGTCAAAGTCATaGCACAGACGATCCACACCACCTATGTATGCACTCTCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: LRDIDQVYKDKRSKS*HRRSTPPMYALSLL
Trigger: CAAGAGAGAGAGTGCATACATAGGTGGTGTGGATCGTCTGTGGCATGACTTTGACCTCTTGTCCTTGTAAACCTGATCTATGTCTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492705.1
CDS-3UTR CAA 90 bp GAAGGCTGGCTGGGGATTTTTGAGATCCCACTGCAGGAACACATCTCTGGGTCTTCACTGGTCATGATTTaGTCTACTTCTTGGAATTCA +
Preference number: 5 (lower is better)
Translates to: EGWLGIFEIPLQEHISGSSLVMI*STSWNS
Trigger: TGAATTCCAAGAAGTAGACAAAATCATGACCAGTGA...AGACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GCTCCGAATAAGGCAAACGCTACATGTCTTCACCGTACCTCCCTCAGCTACTGTCTGAATGGGAATGGTTaGTATATCAGCAATGACATC +
Preference number: 5 (lower is better)
Translates to: APNKANATCLHRTSLSYCLNGNG*YISNDI
Trigger: GATGTCATTGCTGATATACAAACCATTCCCATTCAG...ACAGTAGCTGAGGGAGGTACGGTGAAGACATGTAGCGTTTGCCTTATTCGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp CTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACATGTTAAGGTGGGACAGTTaGAAGAGGCACCACAGGTTT +
Preference number: 5 (lower is better)
Translates to: LMSYTRSWRWGRDCLKHMLRWDS*KRHHRF
Trigger: AAACCTGTGGTGCCTCTTCAAACTGTCCCACCTTAA...CATGTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTATATGACAGAGACCACTaGAGGAAAGCCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: TKRNFHMDVQILCVLGILYDRDH*RKASCF
Trigger: GAAGCAGCTGGCTTTCCTCAAGTGGTCTCTGTCATA...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GGGAGCAGGATATGGACACACAGGACTTCAGTGGAAAAGGAACAAGACCTCGAGAAGCCTGCTACCATTTaGTTTCTGATCTTATCTCCT +
Preference number: 5 (lower is better)
Translates to: GSRIWTHRTSVEKEQDLEKPATI*FLILSP
Trigger: AGGAGATAAGATCAGAAACAAAATGGTAGCAGGCTT...CTCGAGGTCTTGTTCCTTTTCCACTGAAGTCCTGTGTGTCCATATCCTGCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GAAGGCTGGCTGGGGATTTTTGAGATCCCACTGCAGGAACACATCTCTGGGTCTCAAAATACAGTTTCTTaGGATACATCCTGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: EGWLGIFEIPLQEHISGSQNTVS*DTSCSF
Trigger: AAAGGAGCAGGATGTATCCAAAGAAACTGTATTTTG...AGACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp TCATTCAGAGCTGGTACGGAAGCCTGGCTCTCTTCTAACTGTATTTGGCCATGGTCACAACCAGACATCTaGACAAAGGCTCCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: SFRAGTEAWLSSNCIWPWSQPDI*TKAPFK
Trigger: TTTGAAAGGAGCCTTTGTCAAGATGTCTGGTTGTGA...CCATGGCCAAATACAGTTAGAAGAGAGCCAGGCTTCCGTACCAGCTCTGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GCAGGCACAAACCCAGAAACTCGGCTAACTCCAGCATTTGACAGTTCCGGTAGAAAGACATCGACTCTTTaGAGGAAATTCCAAAGGTAC +
Preference number: 5 (lower is better)
Translates to: AGTNPETRLTPAFDSSGRKTSTL*RKFQRY
Trigger: GTACCTTTGGAATTTCCTCAAAAGAGTCGATGTCTT...TCTACCGGAACTGTCAAATGCTGGAGTTAGCCGAGTTTCTGGGTTTGTGCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp ACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTATCTGTGAGACTTTCTTaGGCCTCTTCTCTGGCTCAG +
Preference number: 5 (lower is better)
Translates to: TKRNFHMDVQILCVLGILSVRLS*ASSLAQ
Trigger: CTGAGCCAGAGAAGAGGCCAAAGAAAGTCTCACAGA...TAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CAA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACAAGCTGCCTGCCACCTaGACTTTGCCTCGAGCTCTC +
Preference number: 5 (lower is better)
Translates to: ESRKGYSALLANYLNFGYKLPAT*TLPRAL
Trigger: GAGAGCTCGAGGCAAAGTCAAGGTGGCAGGCAGCTT...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CAA 90 bp TCAGCAGTAAAAGTAGAGGACCCTCCTTCACCAGTTTCTAAAAAGGTTGCACCTATGGACTGTGCATTTTaGAGTGGTTTGGCGGTAGGG +
Preference number: 5 (lower is better)
Translates to: SAVKVEDPPSPVSKKVAPMDCAF*SGLAVG
Trigger: CCCTACCGCCAAACCACTCAAAAATGCACAGTCCAT...AGGTGCAACCTTTTTAGAAACTGGTGAAGGAGGGTCCTCTACTTTTACTGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CAA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAATGGACTGTGCATTTTaGAGTGGTTTGGCGGTAGGG +
Preference number: 5 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLEMDCAF*SGLAVG
Trigger: CCCTACCGCCAAACCACTCAAAAATGCACAGTCCAT...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000431684.1
ENST00000432485.1
CDS-3UTR CAA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACACTCTCTCCCCACACTaGAAGCGGGCTGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: ESRKGYSALLANYLNFGYTLSPH*KRAAWK
Trigger: TTTCCAGGCAGCCCGCTTCAAGTGTGGGGAGAGAGT...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CAA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAAGAAACCTAGGAGAGTaGGCCAACATTCCAGGACGT +
Preference number: 5 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLERNLGE*ANIPGR
Trigger: ACGTCCTGGAATGTTGGCCAACTCTCCTAGGTTTCT...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CAA 90 bp GAAGGCTGGCTGGGGATTTTTGAGATCCCACTGCAGGAACACATCTCTGGGTCTTTAATGTACATGGCATaGATTATGAGACGGAATTCC +
Preference number: 5 (lower is better)
Translates to: EGWLGIFEIPLQEHISGSLMYMA*IMRRNS
Trigger: GGAATTCCGTCTCATAATCAATGCCATGTACATTAA...AGACCCAGAGATGTGTTCCTGCAGTGGGATCTCAAAAATCCCCAGCCAGCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CAA 90 bp TTTGGGATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACAATCCAGGTCCCTGTTaGCAGGAGGAGATTTATAAT +
Preference number: 5 (lower is better)
Translates to: FGICPPSLCLQCFSDHFNNPGPC*QEEIYN
Trigger: ATTATAAATCTCCTCCTGCAAACAGGGACCTGGATT...GTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGATCCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS-3UTR CAA 90 bp ATCTGTCCCCCATCCCTGTGTTTGCAGTGTTTCAGCGACCATTTCAACATCTCCCTGACAAGTGCAAACTaGTGTTTTAGGAAGACCACT +
Preference number: 5 (lower is better)
Translates to: ICPPSLCLQCFSDHFNISLTSAN*CFRKTT
Trigger: AGTGGTCTTCCTAAAACACAAGTTTGCACTTGTCAG...GGAGATGTTGAAATGGTCGCTGAAACACTGCAAACACAGGGATGGGGGACAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS GCA 90 bp TTAGGCCTCTTATCCCATCCACTAGCTGCCAAATATGGATTCAGCTaGTCTGTGCTGGATGAAAATCCGTCCAGGAGTCTTTTATATCTG +
Preference number: 5 (lower is better)
Translates to: LGLLSHPLAAKYGFS*SVLDENPSRSLLYL
Trigger: CAGATATAAAAGACTCCTGGACGGATTTTCATCCAGCACAGAGCAGCTGAATCCATATTTGGCAGCTAGTGGATGGGATAAGAGGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS CCA 90 bp GCCATGAAGCTGTTGGTGATTGTCATCTGCTTCACAGACCAGGTTTaGTTTACACAACTCTTCCTTCCCATTGTCCACATTAGAAATGGC +
Preference number: 5 (lower is better)
Translates to: AMKLLVIVICFTDQV*FTQLFLPIVHIRNG
Trigger: GCCATTTCTAATGTGGACAATGGGAAGGAAGAGTTGTGTAAACCAAACCTGGTCTGTGAAGCAGATGACAATCACCAACAGCTTCATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000461722.1
CDS-3UTR CAA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGTCCGTCTTAGTCCCATaGACCTTCATACCTTGTACT +
Preference number: 5 (lower is better)
Translates to: TVNKAELSYGRANPVCPWSVLVP*TFIPCT
Trigger: AGTACAAGGTATGAAGGTCAATGGGACTAAGACGGA...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GGGAGAGGTATTGAGGTGAAACATAGGTCGTGTCTATACAGTCTGGGCAAAGTGTGCCAAACTCAGAGTTaGGTTCTAGTCTTGATCCTT +
Preference number: 5 (lower is better)
Translates to: GRGIEVKHRSCLYSLGKVCQTQS*VLVLIL
Trigger: AAGGATCAAGACTAGAACCAAACTCTGAGTTTGGCA...CACTTTGCCCAGACTGTATAGACACGACCTATGTTTCACCTCAATACCTCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp TGCTCCTCTTCCTTGGCAAAGAAGGTCTCCAGTTCCATTAGTTTCTGTATCAAAATGGTGGACTCATCTTaGTCAGCCTTCGGTTGGTTC +
Preference number: 5 (lower is better)
Translates to: CSSSLAKKVSSSISFCIKMVDSS*SAFGWF
Trigger: GAACCAACCGAAGGCTGACAAAGATGAGTCCACCAT...TTTGATACAGAAACTAATGGAACTGGAGACCTTCTTTGCCAAGGAAGAGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431684.1
CDS-3UTR CAA 90 bp TCAGCAGTAAAAGTAGAGGACCCTCCTTCACCAGTTTCTAAAAAGGTTGCACCTAGGGACGGCATCTTGTaGCTCAAATCTATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: SAVKVEDPPSPVSKKVAPRDGIL*LKSMKV
Trigger: GACCTTCATAGATTTGAGCAACAAGATGCCGTCCCT...AGGTGCAACCTTTTTAGAAACTGGTGAAGGAGGGTCCTCTACTTTTACTGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp CTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACATGTCACTGCCCAAGCCGTaGTACTCAATTTTGTTACCT +
Preference number: 5 (lower is better)
Translates to: LMSYTRSWRWGRDCLKHMSLPKP*YSILLP
Trigger: AGGTAACAAAATTGAGTACAACGGCTTGGGCAGTGA...CATGTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CAA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGAGAAACCTAGGAGAGTaGGCCAACATTCCAGGACGT +
Preference number: 5 (lower is better)
Translates to: FHMDVQILCVLGILVLLKRNLGE*ANIPGR
Trigger: ACGTCCTGGAATGTTGGCCAACTCTCCTAGGTTTCT...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS-3UTR CAA 90 bp GGGAGAGGTATTGAGGTGAAACATAGGTCGTGTCTATACAGTCTGGGCAAAGTGCTTTTGCTGCTTGATTaGTGGCTAGACGGTAACATT +
Preference number: 5 (lower is better)
Translates to: GRGIEVKHRSCLYSLGKVLLLLD*WLDGNI
Trigger: AATGTTACCGTCTAGCCACAAATCAAGCAGCAAAAG...CACTTTGCCCAGACTGTATAGACACGACCTATGTTTCACCTCAATACCTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS GCA 90 bp TCTGGTCACTACTTAGCATCTCCTTGGCTGACTGACCTTCACTTTTaGATTCATCTGGTCTGTTTTGGTTACTCTGACAGTCAAGGACTT +
Preference number: 5 (lower is better)
Translates to: SGHYLASPWLTDLHF*IHLVCFGYSDSQGL
Trigger: AAGTCCTTGACTGTCAGAGTAACCAAAACAGACCAGATGAATGCAAAAGTGAAGGTCAGTCAGCCAAGGAGATGCTAAGTAGTGACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CCA 90 bp AGTGCTCAGGAAAAGTCCTTGAGGACTCAGTCGTGCAATCTGAGCTaGATGATTTCACATGAAAGGATACTGGGAAGATTTCAGAACCAA +
Preference number: 5 (lower is better)
Translates to: SAQEKSLRTQSCNLS*MISHERILGRFQNQ
Trigger: TTGGTTCTGAAATCTTCCCAGTATCCTTTCATGTGAAATCATCCAGCTCAGATTGCACGACTGAGTCCTCAAGGACTTTTCCTGAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS-3UTR CAA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAAACATGTGAAAGTTCTTaGCTGGACTGCATCAGGAGA +
Preference number: 5 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLETCESS*LDCIRR
Trigger: TCTCCTGATGCAGTCCAGCAAAGAACTTTCACATGT...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp CCTCTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACTGTATGGAGACTGTCTaGAATGCAGTTATTGTGGAT +
Preference number: 5 (lower is better)
Translates to: PLMSYTRSWRWGRDCLKHCMETV*NAVIVD
Trigger: ATCCACAATAACTGCATTCAAGACAGTCTCCATACA...GTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACAGCCACCCACAAACTTGCAGGCTGATTTaGCTGGACTTGAAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GYSALLANYLNFGYSHPQTCRLI*LDLKAA
Trigger: TGCTGCTTTCAAGTCCAGCAAAATCAGCCTGCAAGT...TTGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp TGGAATCCTAGTGTTACTGAAGATAGGCTGCTGCTTCCTCCTGTGGATGGCAGAAGTTTGGTTCTAGTCTaGATCCTTCAGTCATTTCTT +
Preference number: 5 (lower is better)
Translates to: WNPSVTEDRLLLPPVDGRSLVLV*ILQSFL
Trigger: AAGAAATGACTGAAGGATCAAGACTAGAACCAAACT...TCTGCCATCCACAGGAGGAAGCAGCAGCCTATCTTCAGTAACACTAGGATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp TTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCCTAGTGTTACTGAAGTTCTTCTTTAACCTTTaGGGTCGAGGAAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: FHMDVQILCVLGILVLLKFFFNL*GRGRPM
Trigger: CATGGGCCTTCCTCGACCCAAAAGGTTAAAGAAGAA...CTTCAGTAACACTAGGATTCCAAGGACACACAGGATTTGCACGTCCATATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS TCA 90 bp CGATGTCTACCATACCTTCTGTGGACTCATCACAACCAGACATCTTaGCAAAGGCTCCTTTCAAATTGCATTTCTTTGGACTACCACAAG +
Preference number: 5 (lower is better)
Translates to: RCLPYLLWTHHNQTS*QRLLSNCISLDYHK
Trigger: CTTGTGGTAGTCCAAAGAAATGCAATTTGAAAGGAGCCTTTGTCAAGATGTCTGGTTGTGATGAGTCCACAGAAGGTATGGTAGACATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CCA 90 bp CTGGTTTCTGAAACCTCATCACTGGTCATGATTTTGTCTACTTCTTaGAATTCACCGCATCCAGCTGAGAGATCTTTACTCACATTGCCA +
Preference number: 5 (lower is better)
Translates to: LVSETSSLVMILSTS*NSPHPAERSLLTLP
Trigger: TGGCAATGTGAGTAAAGATCTCTCAGCTGGATGCGGTGAATTCCAAGAAGTAGACAAAATCATGACCAGTGATGAGGTTTCAGAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000461722.1
CDS-3UTR CAA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAGTTTTCTAAGGATATaGTTCTGGATTCTGGACCAG +
Preference number: 5 (lower is better)
Translates to: TVNKAELSYGRANPVCPWSFLRI*FWILDQ
Trigger: CTGGTCCAGAATCCAGAACAATATCCTTAGAAAACT...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp ACCGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAGAGATATCCTGAGATaGAACGCTGTGACATTCTAT +
Preference number: 5 (lower is better)
Translates to: TVNKAELSYGRANPVCPWRDILR*NAVTFY
Trigger: ATAGAATGTCACAGCGTTCAATCTCAGGATATCTCT...CCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp CTAATGAGTTACACTAGAAGCTGGAGATGGGGAAGGGATTGCCTGAAACACATGTCTCCCAACAATGATTaGCTCCTGATAGGAAACTTT +
Preference number: 5 (lower is better)
Translates to: LMSYTRSWRWGRDCLKHMSPNND*LLIGNF
Trigger: AAAGTTTCCTATCAGGAGCAAATCATTGTTGGGAGA...CATGTGTTTCAGGCAATCCCTTCCCCATCTCCAGCTTCTAGTGTAACTCATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp AGACCAGCCCAAGGAGATGCTGAGGCCTCTCACCAAGAATTCAAATCCAATTCATTAATGTACATGGCATaGATTATGAGACGGAATTCC +
Preference number: 5 (lower is better)
Translates to: RPAQGDAEASHQEFKSNSLMYMA*IMRRNS
Trigger: GGAATTCCGTCTCATAATCAATGCCATGTACATTAA...TGAATTGGATTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS TCA 90 bp TGTCTTTTATTTTTGTCTGAATGGGAATGGTTTGTATATCAGCAATaGCATCTGCTCTACCCTCTAATGGAGGGTGATGGCTCTGATGGG +
Preference number: 5 (lower is better)
Translates to: CLLFLSEWEWFVYQQ*HLLYPLMEGDGSDG
Trigger: CCCATCAGAGCCATCACCCTCCATTAGAGGGTAGAGCAGATGTCATTGCTGATATACAAACCATTCCCATTCAGACAAAAATAAAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 90 bp ACAGGTACATACGCTGTCTCTGTCACTAGAATTACTCCAATCTCTTaGTACTATTTCCTTCATCTCAGGAAGGACTGTGCAGTCCTTTAC +
Preference number: 5 (lower is better)
Translates to: TGTYAVSVTRITPIS*YYFLHLRKDCAVLY
Trigger: GTAAAGGACTGCACAGTCCTTCCTGAGATGAAGGAAATAGTATCAAGAGATTGGAGTAATTCTAGTGACAGAGACAGCGTATGTACCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS GCA 90 bp CACAGAGTGTCCTGTTCCTTGGCAGCAGTGATCACGGTGCTGAAATaGATTTTCATATTTTGTTATCAAAGAGTTATCAACTTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: HRVSCSLAAVITVLK*IFIFCYQRVINLQA
Trigger: AGCCTGCAAGTTGATAACTCTTTGATAACAAAATATGAAAATGCATTTCAGCACCGTGATCACTGCTGCCAAGGAACAGGACACTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CCA 90 bp TGCATCAAGGAGGAAAAACTGCTTTCTTCAGAGTGTCCACCAGGATaGCTCATATTAGTAAAAGTTTCTTTATGGTCCTCAGGGTTTGTC +
Preference number: 5 (lower is better)
Translates to: CIKEEKLLSSECPPG*LILVKVSLWSSGFV
Trigger: GACAAACCCTGAGGACCATAAAGAAACTTTTACTAATATGAGCCATCCTGGTGGACACTCTGAAGAAAGCAGTTTTTCCTCCTTGATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CCA 90 bp TGTAATCAAATTCTGGGGATGGTAGCAACAGAGCAGTACCTTGCTTaGGTTTTAATACCTCACTTACAGGACTTATTTGATCCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: CNQILGMVATEQYLA*VLIPHLQDLFDPLA
Trigger: TGCCAGAGGATCAAATAAGTCCTGTAAGTGAGGTATTAAAACCCAAGCAAGGTACTGCTCTGTTGCTACCATCCCCAGAATTTGATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp CGTAAACAAAGCGGAACTTTCATATGGACGTGCAAATCCTGTGTGTCCTTGGAATCTCCCAACAATGATTaGCTCCTGATAGGAAACTTT +
Preference number: 5 (lower is better)
Translates to: RKQSGTFIWTCKSCVSLESPNND*LLIGNF
Trigger: AAAGTTTCCTATCAGGAGCAAATCATTGTTGGGAGA...TTCCAAGGACACACAGGATTTGCACGTCCATATGAAAGTTCCGCTTTGTTTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS TCA 90 bp TCATTGATCATGGTGGACTCATCTTTGTCAGCCTTCGGTTGGTTCTaGTTTTGTGCATCATCTAACAACAGACTAGATGATATGCACTGT +
Preference number: 5 (lower is better)
Translates to: SLIMVDSSLSAFGWF*FCASSNNRLDDMHC
Trigger: ACAGTGCATATCATCTAGTCTGTTGTTAGATGATGCACAAAATCAGAACCAACCGAAGGCTGACAAAGATGAGTCCACCATGATCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS-3UTR CAA 90 bp GTCACAAACTACCAAACAGAAAAGGAACTGCAGGGGCATCATGTATACCAATGTGATTTACTTAATATATaGGGCTCTACAGGGGTTGTC +
Preference number: 5 (lower is better)
Translates to: VTNYQTEKELQGHHVYQCDLLNI*GSTGVV
Trigger: GACAACCCCTGTAGAGCCCAATATATTAAGTAAATC...ACATTGGTATACATGATGCCCCTGCAGTTCCTTTTCTGTTTGGTAGTTTGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp TCTTCCATGCAGCGATCAACTGGGTCAAATGCCTATCATGTATTCTTAAGACATCTTTTGCTGCTTGATTaGTGGCTAGACGGTAACATT +
Preference number: 5 (lower is better)
Translates to: SSMQRSTGSNAYHVFLRHLLLLD*WLDGNI
Trigger: AATGTTACCGTCTAGCCACAAATCAAGCAGCAAAAG...ATGTCTTAAGAATACATGATAGGCATTTGACCCAGTTGATCGCTGCATGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS GCA 90 bp GGCAAGACATCGACTCTTTTGAGGAAATTCCAAAGGTACTTTCTTTaGCAAACTCAGAGTTTGGTTCTAGTCTTGATCCTTCAGTCATTT +
Preference number: 5 (lower is better)
Translates to: GKTSTLLRKFQRYFL*QTQSLVLVLILQSF
Trigger: AAATGACTGAAGGATCAAGACTAGAACCAAACTCTGAGTTTGGCAAAGAAAGTACCTTTGGAATTTCCTCAAAAGAGTCGATGTCTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACAGCCACCCACAACCGTTGTACTCAATTTaGTTACCTAACACCATTTCA +
Preference number: 5 (lower is better)
Translates to: GYSALLANYLNFGYSHPQPLYSI*LPNTIS
Trigger: TGAAATGGTGTTAGGTAACAAAATTGAGTACAACGG...TTGTGGGTGGCTGTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000432485.1
CDS TCA 90 bp TTTAAAGACAAATTTACTCTGCCCAATATTCTTTTATTTGGTTCATaGTCTGCAACAGACTCCATCTCATGGGCACAAGAGTCTGGACAC +
Preference number: 5 (lower is better)
Translates to: FKDKFTLPNILLFGS*SATDSISWAQESGH
Trigger: GTGTCCAGACTCTTGTGCCCATGAGATGGAGTCTGTTGCAGATCATGAACCAAATAAAAGAATATTGGGCAGAGTAAATTTGTCTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS GCA 90 bp CAACCAGTTCATTGGTACAAGAAAGTTCATTCATCTCACAGGCTATaGTCTGTTCATCTAAAAGTGGAATATCATCATGTGAGGTCTGTA +
Preference number: 5 (lower is better)
Translates to: QPVHWYKKVHSSHRL*SVHLKVEYHHVRSV
Trigger: TACAGACCTCACATGATGATATTCCACTTTTAGATGAACAGAGCATAGCCTGTGAGATGAATGAACTTTCTTGTACCAATGAACTGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CCA 90 bp ATTTCAATGGATTTCAGGCTTCTTAGGGAAACAGAGCTTTCATCATaGCAAGACATCGACTCTTTTGAGGAAATTCCAAAGGTACTTTCT +
Preference number: 5 (lower is better)
Translates to: ISMDFRLLRETELSS*QDIDSFEEIPKVLS
Trigger: AGAAAGTACCTTTGGAATTTCCTCAAAAGAGTCGATGTCTTGCCATGATGAAAGCTCTGTTTCCCTAAGAAGCCTGAAATCCATTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACGCTAAAGGCATCTCTTaGTTTAAATGCAGTAGAGAG +
Preference number: 5 (lower is better)
Translates to: ESRKGYSALLANYLNFGYAKGIS*FKCSRE
Trigger: CTCTCTACTGCATTTAAACAAAGAGATGCCTTTAGC...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS-3UTR CAA 90 bp GAATCCAGGAAAGGATACTCTGCACTTCTGGCCAATTATTTAAACTTTGGATACTGGAATGTAGAGCTTTaGTTCCTGAATCAGCCATTT +
Preference number: 5 (lower is better)
Translates to: ESRKGYSALLANYLNFGYWNVEL*FLNQPF
Trigger: AAATGGCTGATTCAGGAACAAAAGCTCTACATTCCA...GTATCCAAAGTTTAAATAATTGGCCAGAAGTGCAGAGTATCCTTTCCTGGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 90 bp GCAGTACCTTGCTTGGGTTTTAATACCTCACTTACAGGACTTATTTaGTCCTCTGGCATTAAACTCACAATGGATTTTCTTTCAAACAGA +
Preference number: 5 (lower is better)
Translates to: AVPCLGFNTSLTGLI*SSGIKLTMDFLSNR
Trigger: TCTGTTTGAAAGAAAATCCATTGTGAGTTTAATGCCAGAGGATCAAATAAGTCCTGTAAGTGAGGTATTAAAACCCAAGCAAGGTACTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 90 bp AGTTTGGTTCTAGTCTTGATCCTTCAGTCATTTCTTGTGTTTCTCTaGGAGATGTTCCTTTATCTTGCTGTCCATAATGGCTATCATTTA +
Preference number: 5 (lower is better)
Translates to: SLVLVLILQSFLVFL*EMFLYLAVHNGYHL
Trigger: TAAATGATAGCCATTATGGACAGCAAGATAAAGGAACATCTCTCAGAGAAACACAAGAAATGACTGAAGGATCAAGACTAGAACCAAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 72 bp CACCGCGCCCGGCCCACGTGGCGAGTCTTAACCACGTaGCCCTCCCCGCTCTCCAGCCCGGCAGGTACCAGC +
Preference number: 6 (lower is better)
Translates to: HRARPTWRVLTT*PSPLSSPAGTS
Trigger: GCTGGTACCTGCCGGGCTGGAGAGCGGGGAGGGTCACGTGGTTAAGACTCGCCACGTGGGCCGGGCGCGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS GCA 72 bp GATAGCTTCTCGGATGGCCCCGCCCCTCCGGAGAGCTaGAGCCAATCAGACGGCGTGAGGCCAGCAGTGGGT +
Preference number: 6 (lower is better)
Translates to: DSFSDGPAPPES*SQSDGVRPAVG
Trigger: ACCCACTGCTGGCCTCACGCCGTCTGATTGGCTGCAGCTCTCCGGAGGGGCGGGGCCATCCGAGAAGCTATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS CCA 72 bp AGACGGCGTGAGGCCAGCAGTGGGTGCGGCTGCGCTTaGCGCTGCGCATATCCGAATACCAGGAAGTGCCCG +
Preference number: 6 (lower is better)
Translates to: RRREASSGCGCA*RCAYPNTRKCP
Trigger: CGGGCACTTCCTGGTATTCGGATATGCGCAGCGCCAAGCGCAGCCGCACCCACTGCTGGCCTCACGCCGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS GCA 72 bp CCAATCAGACGGCGTGAGGCCAGCAGTGGGTGCGGCTaGGCTTGGCGCTGCGCATATCCGAATACCAGGAAG +
Preference number: 6 (lower is better)
Translates to: PIRRREASSGCG*AWRCAYPNTRK
Trigger: CTTCCTGGTATTCGGATATGCGCAGCGCCAAGCGCAGCCGCACCCACTGCTGGCCTCACGCCGTCTGATTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS CAA 72 bp GAGACGGGCACTGGAGGGCCTCTCCTAAGGCAAGCCTaGCCGGAGCACAGTGCTCAGGAAAAGTCCTTGAGG +
Preference number: 6 (lower is better)
Translates to: ETGTGGPLLRQA*PEHSAQEKSLR
Trigger: CCTCAAGGACTTTTCCTGAGCACTGTGCTCCGGCAAGGCTTGCCTTAGGAGAGGCCCTCCAGTGCCCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS CAA 90 bp TGGGAGGTTGAGACGGGCACTGGAGGGCCTCTCCTAAGGCAAGCCTaGCCGGAGCACAGTGCTCAGGAAAAGTCCTTGAGGACTCAGTCG +
Preference number: 6 (lower is better)
Translates to: WEVETGTGGPLLRQA*PEHSAQEKSLRTQS
Trigger: CGACTGAGTCCTCAAGGACTTTTCCTGAGCACTGTGCTCCGGCAAGGCTTGCCTTAGGAGAGGCCCTCCAGTGCCCGTCTCAACCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS GCA 72 bp GGACAGAGCAGTCTGCTCTGGTCTGGACTATGGCAGTaGCTCCATAGTCTTGGAGAGGAGCTGGAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: GQSSLLWSGLWQ*LHSLGEELEAG
Trigger: CCCAGCCTCCAGCTCCTCTCCAAGACTATGGAGGCACTGCCATAGTCCAGACCAGAGCAGACTGCTCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS GCA 72 bp TGCGCTTGGCGCTGCGCATATCCGAATACCAGGAAGTaGCCGGTTTCGCTGTCAGTGCTCGGGCAGCTAGAA +
Preference number: 6 (lower is better)
Translates to: CAWRCAYPNTRK*PVSLSVLGQLE
Trigger: TTCTAGCTGCCCGAGCACTGACAGCGAAACCGGGCACTTCCTGGTATTCGGATATGCGCAGCGCCAAGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330495.8
CDS CCA 72 bp GGCCAAGGACAGAGCAGTCTGCTCTGGTCTGGACTATaGCAGTGCCTCCATAGTCTTGGAGAGGAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: GQGQSSLLWSGL*QCLHSLGEELE
Trigger: CTCCAGCTCCTCTCCAAGACTATGGAGGCACTGCCATAGTCCAGACCAGAGCAGACTGCTCTGTCCTTGGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS GCA 72 bp AGGGCCTCTCCTAAGGCAAGCCTTGCCGGAGCACAGTaGTCAGGAAAAGTCCTTGAGGACTCAGTCGTGCAA +
Preference number: 6 (lower is better)
Translates to: RASPKASLAGAQ*SGKVLEDSVVQ
Trigger: TTGCACGACTGAGTCCTCAAGGACTTTTCCTGAGCACTGTGCTCCGGCAAGGCTTGCCTTAGGAGAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS CCA 72 bp CGAAGGAGCAGACAGAAGGACCATGCTGGCTCCAAATaGATAGGACTCTGCCCACCGAGTAGGGCAGAGAAC +
Preference number: 6 (lower is better)
Translates to: RRSRQKDHAGSK*IGLCPPSRAEN
Trigger: GTTCTCTGCCCTACTCGGTGGGCAGAGTCCTATCCATTTGGAGCCAGCATGGTCCTTCTGTCTGCTCCTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
ENST00000492705.1
CDS CCA 72 bp TGCTACCAAGCAAGACTTTGGTACCAAGGCAGGGAATaGAGGCTCCAGCCTCGTCTGACTGCCGCTGGTGTT +
Preference number: 6 (lower is better)
Translates to: CYQARLWYQGRE*RLQPRLTAAGV
Trigger: AACACCAGCGGCAGTCAGACGAGGCTGGAGCCTCCATTCCCTGCCTTGGTACCAAAGTCTTGCTTGGTAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS TCA 72 bp TGGGACAAGAAGAAAGAAAAGGTCCACTTGGGAGGTTaGGACGGGCACTGGAGGGCCTCTCCTAAGGCAAGC +
Preference number: 6 (lower is better)
Translates to: WDKKKEKVHLGG*DGHWRASPKAS
Trigger: GCTTGCCTTAGGAGAGGCCCTCCAGTGCCCGTCTCAACCTCCCAAGTGGACCTTTTCTTTCTTCTTGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS GCA 72 bp CACACGCACACGCGCACACACACGCTGAGTCTCATGTaGTTACCTCGTCTGACTGCCGCTGGTGTTATATGT +
Preference number: 6 (lower is better)
Translates to: HTHTRTHTLSLM*LPRLTAAGVIC
Trigger: ACATATAACACCAGCGGCAGTCAGACGAGGTAAGCACATGAGACTCAGCGTGTGTGTGCGCGTGTGCGTGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492705.1
CDS CCA 72 bp GCTGGAGACCGTAACCCTTTCAGGCCCTGTGTAAACTaGGTCATGAAGAGCCTCTGCATGGTAGGCATGTGG +
Preference number: 6 (lower is better)
Translates to: AGDRNPFRPCVN*VMKSLCMVGMW
Trigger: CCACATGCCTACCATGCAGAGGCTCTTCATGACCCAGTTTACACAGGGCCTGAAAGGGTTACGGTCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
ENST00000492705.1
CDS GCA 72 bp GGTCTGACTATGGACGCCAGTGTCTTCCCTGAATGTTaGCATCCCAGGGCAACCGTGGGACAAGAAGAAAGA +
Preference number: 6 (lower is better)
Translates to: GLTMDASVFPEC*HPRATVGQEER
Trigger: TCTTTCTTCTTGTCCCACGGTTGCCCTGGGATGGCAACATTCAGGGAAGACACTGGCGTCCATAGTCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS CCA 72 bp AATTCCTGCCTGGCCCCCTGGATCTCTGAAGACCTTTaGCTCCATGCTCTCGCTTCTCTTTGCCCTATCCAA +
Preference number: 6 (lower is better)
Translates to: NSCLAPWISEDL*LHALASLCPIQ
Trigger: TTGGATAGGGCAAAGAGAAGCGAGAGCATGGAGCCAAAGGTCTTCAGAGATCCAGGGGGCCAGGCAGGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS CCA 72 bp AGGAACACCGTCGGTATCTTAGCTTCTGAGTCTTCATaGCTGGGGCCAGTTTGGAGGCAAGGATGGACAGCT +
Preference number: 6 (lower is better)
Translates to: RNTVGILASESS*LGPVWRQGWTA
Trigger: AGCTGTCCATCCTTGCCTCCAAACTGGCCCCAGCCATGAAGACTCAGAAGCTAAGATACCGACGGTGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS CAA 72 bp ATGGTAACATGGTGTGGCTGCTTGTGGTGCCCAGACTaGGTTGCCGCTTGCAGTGAGGGGAATGAAGAGAAG +
Preference number: 6 (lower is better)
Translates to: MVTWCGCLWCPD*VAACSEGNEEK
Trigger: CTTCTCTTCATTCCCCTCACTGCAAGCGGCAACCAAGTCTGGGCACCACAAGCAGCCACACCATGTTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
ENST00000492705.1
CDS TCA 72 bp ACCAGCAGATCCTTTTGGTTGTGGTTTACCTCCCCGTaGGGCTCGGTGACAGTCTCTCTCTGGTCACTACTT +
Preference number: 6 (lower is better)
Translates to: TSRSFWLWFTSP*GSVTVSLWSLL
Trigger: AAGTAGTGACCAGAGAGAGACTGTCACCGAGCCTCACGGGGAGGTAAACCACAACCAAAAGGATCTGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 72 bp AGAAGTTCAGAGGAACACCGTCGGTATCTTAGCTTCTaGGTCTTCATGGCTGGGGCCAGTTTGGAGGCAAGG +
Preference number: 6 (lower is better)
Translates to: RSSEEHRRYLSF*VFMAGASLEAR
Trigger: CCTTGCCTCCAAACTGGCCCCAGCCATGAAGACTCAGAAGCTAAGATACCGACGGTGTTCCTCTGAACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS GCA 72 bp ATGTATTTGATCACACCCAGCAGAGGAGGGGTCTTGTaGTTTCCGAGGGGCACCAAGAAGGCAAGGACTTGT +
Preference number: 6 (lower is better)
Translates to: MYLITPSRGGVL*FPRGTKKARTC
Trigger: ACAAGTCCTTGCCTTCTTGGTGCCCCTCGGAAAGCACAAGACCCCTCCTCTGCTGGGTGTGATCAAATACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS GCA 72 bp TTCAGGCCCTGTGTAAACTGGGTCATGAAGAGCCTCTaGATGGTAGGCATGTGGCTGGAGAAGCTCCGTTTT +
Preference number: 6 (lower is better)
Translates to: FRPCVNWVMKSL*MVGMWLEKLRF
Trigger: AAAACGGAGCTTCTCCAGCCACATGCCTACCATGCAGAGGCTCTTCATGACCCAGTTTACACAGGGCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
ENST00000492705.1
CDS CCA 72 bp TTTGCTCCCTCAGAGGGTTCTCTTATAATTCCTGCCTaGCCCCCTGGATCTCTGAAGACCTTTGGCTCCATG +
Preference number: 6 (lower is better)
Translates to: FAPSEGSLIIPA*PPGSLKTFGSM
Trigger: CATGGAGCCAAAGGTCTTCAGAGATCCAGGGGGCCAGGCAGGAATTATAAGAGAACCCTCTGAGGGAGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS CAA 90 bp CTCCTAAGGCAAGCCTTGCCGGAGCACAGTGCTCAGGAAAAGTCCTaGAGGACTCAGTCGTGCAATCTGAGCTGGATGATTTCACATGAA +
Preference number: 6 (lower is better)
Translates to: LLRQALPEHSAQEKS*RTQSCNLSWMISHE
Trigger: TTCATGTGAAATCATCCAGCTCAGATTGCACGACTGAGTCCTCAAGGACTTTTCCTGAGCACTGTGCTCCGGCAAGGCTTGCCTTAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS TCA 72 bp ATCTGGCCTAGGAATGGTTTTCCGGATGCGAATCTGTaGGACTTTCTTTGGCCTCTTCTCTGGCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: IWPRNGFPDANL*DFLWPLLWLSL
Trigger: GAGGCTGAGCCAGAGAAGAGGCCAAAGAAAGTCTCACAGATTCGCATCCGGAAAACCATTCCTAGGCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000432485.1
CDS GCA 72 bp GAAAATCTTCAGGGAGGTCCACATGTGAAAGTTCTTTaGTGGACTGCATCAGGAGATCCTCCTGACTCGGGC +
Preference number: 6 (lower is better)
Translates to: ENLQGGPHVKVL*WTASGDPPDSG
Trigger: GCCCGAGTCAGGAGGATCTCCTGATGCAGTCCAGCAAAGAACTTTCACATGTGGACCTCCCTGAAGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS CCA 72 bp GTGCAGCATCCAGTTCTCTCCGAGACAAGGTACTCCTaGAGTCCTCTTGAAATGCCAGTTTCTCTTGCCTTG +
Preference number: 6 (lower is better)
Translates to: VQHPVLSETRYS*SPLEMPVSLAL
Trigger: CAAGGCAAGAGAAACTGGCATTTCAAGAGGACTCCAGGAGTACCTTGTCTCGGAGAGAACTGGATGCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CCA 72 bp GCTCCTCAAGGGATGGCACGGTGTAGACATCTGCTTTaGTATGTGACTAACCAAGCTCTTGGTAGGTGCTGT +
Preference number: 6 (lower is better)
Translates to: APQGMARCRHLL*YVTNQALGRCC
Trigger: ACAGCACCTACCAAGAGCTTGGTTAGTCACATACCAAAGCAGATGTCTACACCGTGCCATCCCTTGAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS CAA 72 bp CCACGAACCTGGAACTCAGAGGCTGAAAGCAGGAGCTaGCTGACAGCTGATTCTGCTACCAAGCAAGACTTT +
Preference number: 6 (lower is better)
Translates to: PRTWNSEAESRS*LTADSATKQDF
Trigger: AAAGTCTTGCTTGGTAGCAGAATCAGCTGTCAGCAAGCTCCTGCTTTCAGCCTCTGAGTTCCAGGTTCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
ENST00000432485.1
CDS CAA 90 bp AGGAGGGGTCTTGTGCTTTCCGAGGGGCACCAAGAAGGCAAGGACTaGTGCATGACTCAGTGTCCTTCCTTAATGGATGATGTAACCTTT +
Preference number: 6 (lower is better)
Translates to: RRGLVLSEGHQEGKD*CMTQCPSLMDDVTF
Trigger: AAAGGTTACATCATCCATTAAGGAAGGACACTGAGTCATGCACAAGTCCTTGCCTTCTTGGTGCCCCTCGGAAAGCACAAGACCCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS CAA 90 bp TCATCCAATCCACGAACCTGGAACTCAGAGGCTGAAAGCAGGAGCTaGCTGACAGCTGATTCTGCTACCAAGCAAGACTTTGGTACCAAG +
Preference number: 6 (lower is better)
Translates to: SSNPRTWNSEAESRS*LTADSATKQDFGTK
Trigger: CTTGGTACCAAAGTCTTGCTTGGTAGCAGAATCAGCTGTCAGCAAGCTCCTGCTTTCAGCCTCTGAGTTCCAGGTTCGTGGATTGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
ENST00000432485.1
CDS TCA 72 bp ACCACGGCAGACATGGAGGAATCAAGTGGAACTGGCTaGGTCTCTACTCCAGATGACAGCATTAGGACAGAT +
Preference number: 6 (lower is better)
Translates to: TTADMEESSGTG*VSTPDDSIRTD
Trigger: ATCTGTCCTAATGCTGTCATCTGGAGTAGAGACTCAGCCAGTTCCACTTGATTCCTCCATGTCTGCCGTGGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS TCA 72 bp GAACCTGGAACTCAGAGGCTGAAAGCAGGAGCTTGCTaGCAGCTGATTCTGCTACCAAGCAAGACTTTGGTA +
Preference number: 6 (lower is better)
Translates to: EPGTQRLKAGAC*QLILLPSKTLV
Trigger: TACCAAAGTCTTGCTTGGTAGCAGAATCAGCTGTCAGCAAGCTCCTGCTTTCAGCCTCTGAGTTCCAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
ENST00000432485.1
CDS CCA 72 bp ATCTTAGCTTCTGAGTCTTCATGGCTGGGGCCAGTTTaGAGGCAAGGATGGACAGCTTGTTTAGTAAGGCTG +
Preference number: 6 (lower is better)
Translates to: ILASESSWLGPV*RQGWTACLVRL
Trigger: CAGCCTTACTAAACAAGCTGTCCATCCTTGCCTCCAAACTGGCCCCAGCCATGAAGACTCAGAAGCTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS CAA 72 bp ACTCGGGCTAGTCTTTTCTTCAGCAGCTGTGGAATGTaGATGTGGATCTTCCTTTGCTCCCTCAGAGGGTTC +
Preference number: 6 (lower is better)
Translates to: TRASLFFSSCGM*MWIFLCSLRGF
Trigger: GAACCCTCTGAGGGAGCAAAGGAAGATCCACATCAACATTCCACAGCTGCTGAAGAAAAGACTAGCCCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS CAA 72 bp CAGTTCTCTCCGAGACAAGGTACTCCTGGAGTCCTCTaGAAATGCCAGTTTCTCTTGCCTTGCACCACAATC +
Preference number: 6 (lower is better)
Translates to: QFSPRQGTPGVL*KCQFLLPCTTI
Trigger: GATTGTGGTGCAAGGCAAGAGAAACTGGCATTTCAAGAGGACTCCAGGAGTACCTTGTCTCGGAGAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CAA 72 bp CTTGTGCTTTCCGAGGGGCACCAAGAAGGCAAGGACTaGTGCATGACTCAGTGTCCTTCCTTAATGGATGAT +
Preference number: 6 (lower is better)
Translates to: LVLSEGHQEGKD*CMTQCPSLMDD
Trigger: ATCATCCATTAAGGAAGGACACTGAGTCATGCACAAGTCCTTGCCTTCTTGGTGCCCCTCGGAAAGCACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS CAA 72 bp GGGAAGAACTCCTTTCTTCGCAAAGGCACCATGTATTaGATCACACCCAGCAGAGGAGGGGTCTTGTGCTTT +
Preference number: 6 (lower is better)
Translates to: GKNSFLRKGTMY*ITPSRGGVLCF
Trigger: AAAGCACAAGACCCCTCCTCTGCTGGGTGTGATCAAATACATGGTGCCTTTGCGAAGAAAGGAGTTCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS CAA 90 bp TCTGCAGCTCCAAGGGCAATGCCCTATTCTGACTTAAAAGAGAGCTaGAGGCTCCAGGTTTTACATCTGGAATCACACTTGGCTCAGGGT +
Preference number: 6 (lower is better)
Translates to: SAAPRAMPYSDLKES*RLQVLHLESHLAQG
Trigger: ACCCTGAGCCAAGTGTGATTCCAGATGTAAAACCTGGAGCCTCAAGCTCTCTTTTAAGTCAGAATAGGGCATTGCCCTTGGAGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS TCA 72 bp TTTACATCTGGAATCACACTTGGCTCAGGGTCAGCATaGAGCTCTCTGGAGACACTTACTGGGAGTTCAGAG +
Preference number: 6 (lower is better)
Translates to: FTSGITLGSGSA*SSLETLTGSSE
Trigger: CTCTGAACTCCCAGTAAGTGTCTCCAGAGAGCTTCATGCTGACCCTGAGCCAAGTGTGATTCCAGATGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS TCA 72 bp GACTACCACAAGGTAGTGAGTTATTACTGCCTGAGCTaGCCAGCAGATCCTTTTGGTTGTGGTTTACCTCCC +
Preference number: 6 (lower is better)
Translates to: DYHKVVSYYCLS*PADPFGCGLPP
Trigger: GGGAGGTAAACCACAACCAAAAGGATCTGCTGGTCAGCTCAGGCAGTAATAACTCACTACCTTGTGGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CCA 72 bp GGAGTTCAGAGTATAATTCCTGTACCACGGCAGACATaGAGGAATCAAGTGGAACTGGCTGAGTCTCTACTC +
Preference number: 6 (lower is better)
Translates to: GVQSIIPVPRQT*RNQVELAESLL
Trigger: GAGTAGAGACTCAGCCAGTTCCACTTGATTCCTCCATGTCTGCCGTGGTACAGGAATTATACTCTGAACTCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS CAA 72 bp ATGGCTGGGGCCAGTTTGGAGGCAAGGATGGACAGCTaGTTTAGTAAGGCTGATTCTTTGGTAGTCTTCCTA +
Preference number: 6 (lower is better)
Translates to: MAGASLEARMDS*FSKADSLVVFL
Trigger: TAGGAAGACTACCAAAGAATCAGCCTTACTAAACAAGCTGTCCATCCTTGCCTCCAAACTGGCCCCAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS CAA 90 bp TTAAAAGAGAGCTTGAGGCTCCAGGTTTTACATCTGGAATCACACTaGGCTCAGGGTCAGCATGAAGCTCTCTGGAGACACTTACTGGGA +
Preference number: 6 (lower is better)
Translates to: LKESLRLQVLHLESH*AQGQHEALWRHLLG
Trigger: TCCCAGTAAGTGTCTCCAGAGAGCTTCATGCTGACCCTGAGCCAAGTGTGATTCCAGATGTAAAACCTGGAGCCTCAAGCTCTCTTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS CAA 90 bp ATCCTCCTGACTCGGGCTAGTCTTTTCTTCAGCAGCTGTGGAATGTaGATGTGGATCTTCCTTTGCTCCCTCAGAGGGTTCTCTTATAAT +
Preference number: 6 (lower is better)
Translates to: ILLTRASLFFSSCGM*MWIFLCSLRGFSYN
Trigger: ATTATAAGAGAACCCTCTGAGGGAGCAAAGGAAGATCCACATCAACATTCCACAGCTGCTGAAGAAAAGACTAGCCCGAGTCAGGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000412743.1
CDS CAA 90 bp TACCCTCTAATGGAGGGTGATGGCTCTGATGGGCATCTCTGCCTGTaGCTAAAGGCATCTCTTTGTTTAAATGCAGTAGAGAGTCAGTTG +
Preference number: 6 (lower is better)
Translates to: YPLMEGDGSDGHLCL*LKASLCLNAVESQL
Trigger: CAACTGACTCTCTACTGCATTTAAACAAAGAGATGCCTTTAGCAACAGGCAGAGATGCCCATCAGAGCCATCACCCTCCATTAGAGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CAA 90 bp AGTTTGGAGGCAAGGATGGACAGCTTGTTTAGTAAGGCTGATTCTTaGGTAGTCTTCCTAAAATTCAGGCTCCTCAAGGGATGGCACGGT +
Preference number: 6 (lower is better)
Translates to: SLEARMDSLFSKADS*VVFLKFRLLKGWHG
Trigger: ACCGTGCCATCCCTTGAGGAGCCTGAATTTTAGGAAGACTACCAAAGAATCAGCCTTACTAAACAAGCTGTCCATCCTTGCCTCCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS TCA 72 bp AGCTGCCAAATATGGATTCAGCTGCTCTGTGCTGGATaGAAATCCGTCCAGGAGTCTTTTATATCTGAGGCG +
Preference number: 6 (lower is better)
Translates to: SCQIWIQLLCAG*KSVQESFISEA
Trigger: CGCCTCAGATATAAAAGACTCCTGGACGGATTTTCATCCAGCACAGAGCAGCTGAATCCATATTTGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS GCA 72 bp CCTCTAATGGAGGGTGATGGCTCTGATGGGCATCTCTaGCTGTTGCTAAAGGCATCTCTTTGTTTAAATGCA +
Preference number: 6 (lower is better)
Translates to: PLMEGDGSDGHL*LLLKASLCLNA
Trigger: TGCATTTAAACAAAGAGATGCCTTTAGCAACAGGCAGAGATGCCCATCAGAGCCATCACCCTCCATTAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CAA 72 bp ATGGAGGGTGATGGCTCTGATGGGCATCTCTGCCTGTaGCTAAAGGCATCTCTTTGTTTAAATGCAGTAGAG +
Preference number: 6 (lower is better)
Translates to: MEGDGSDGHLCL*LKASLCLNAVE
Trigger: CTCTACTGCATTTAAACAAAGAGATGCCTTTAGCAACAGGCAGAGATGCCCATCAGAGCCATCACCCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 72 bp TCTCTCTGGTCACTACTTAGCATCTCCTTGGCTGACTaGCCTTCACTTTTGCATTCATCTGGTCTGTTTTGG +
Preference number: 6 (lower is better)
Translates to: SLWSLLSISLAD*PSLLHSSGLFW
Trigger: CCAAAACAGACCAGATGAATGCAAAAGTGAAGGTCAGTCAGCCAAGGAGATGCTAAGTAGTGACCAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS GCA 72 bp CACAGTGCTCAGGAAAAGTCCTTGAGGACTCAGTCGTaGAATCTGAGCTGGATGATTTCACATGAAAGGATA +
Preference number: 6 (lower is better)
Translates to: HSAQEKSLRTQS*NLSWMISHERI
Trigger: TATCCTTTCATGTGAAATCATCCAGCTCAGATTGCACGACTGAGTCCTCAAGGACTTTTCCTGAGCACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS CAA 72 bp GTGCTGGTTTCTGAAACCTCATCACTGGTCATGATTTaGTCTACTTCTTGGAATTCACCGCATCCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: VLVSETSSLVMI*STSWNSPHPAE
Trigger: CTCAGCTGGATGCGGTGAATTCCAAGAAGTAGACAAAATCATGACCAGTGATGAGGTTTCAGAAACCAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000461722.1
CDS GCA 72 bp ATTATGGTGGCCATGAAGCTGTTGGTGATTGTCATCTaGTTCACAGACCAGGTTTGGTTTACACAACTCTTC +
Preference number: 6 (lower is better)
Translates to: IMVAMKLLVIVI*FTDQVWFTQLF
Trigger: GAAGAGTTGTGTAAACCAAACCTGGTCTGTGAAGCAGATGACAATCACCAACAGCTTCATGGCCACCATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000461722.1
CDS CAA 72 bp GCAAGGATGGACAGCTTGTTTAGTAAGGCTGATTCTTaGGTAGTCTTCCTAAAATTCAGGCTCCTCAAGGGA +
Preference number: 6 (lower is better)
Translates to: ARMDSLFSKADS*VVFLKFRLLKG
Trigger: TCCCTTGAGGAGCCTGAATTTTAGGAAGACTACCAAAGAATCAGCCTTACTAAACAAGCTGTCCATCCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS CAA 90 bp TCTGCTTCACAGACCAGGTTTGGTTTACACAACTCTTCCTTCCCATaGTCCACATTAGAAATGGCACTGTTTCCTGGTAATGACAACCAA +
Preference number: 6 (lower is better)
Translates to: SASQTRFGLHNSSFP*STLEMALFPGNDNQ
Trigger: TTGGTTGTCATTACCAGGAAACAGTGCCATTTCTAATGTGGACAATGGGAAGGAAGAGTTGTGTAAACCAAACCTGGTCTGTGAAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000461722.1
CDS CAA 90 bp AAGGATACTGGGAAGATTTCAGAACCAAACAGCAGGGACGGCATCTaGTTGCTCAAATCTATGAAGGTCATCTTGATGGATTCGAGAGAA +
Preference number: 6 (lower is better)
Translates to: KDTGKISEPNSRDGI*LLKSMKVILMDSRE
Trigger: TTCTCTCGAATCCATCAAGATGACCTTCATAGATTTGAGCAACAAGATGCCGTCCCTGCTGTTTGGTTCTGAAATCTTCCCAGTATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS TCA 72 bp CTAATGTGCTGGTTTCTGAAACCTCATCACTGGTCATaGTTTTGTCTACTTCTTGGAATTCACCGCATCCAG +
Preference number: 6 (lower is better)
Translates to: LMCWFLKPHHWS*FCLLLGIHRIQ
Trigger: CTGGATGCGGTGAATTCCAAGAAGTAGACAAAATCATGACCAGTGATGAGGTTTCAGAAACCAGCACATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000461722.1
CDS TCA 72 bp TTTTTGTCTGAATGGGAATGGTTTGTATATCAGCAATaGCATCTGCTCTACCCTCTAATGGAGGGTGATGGC +
Preference number: 6 (lower is better)
Translates to: FLSEWEWFVYQQ*HLLYPLMEGDG
Trigger: GCCATCACCCTCCATTAGAGGGTAGAGCAGATGTCATTGCTGATATACAAACCATTCCCATTCAGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 72 bp CCATACCTTCTGTGGACTCATCACAACCAGACATCTTaGCAAAGGCTCCTTTCAAATTGCATTTCTTTGGAC +
Preference number: 6 (lower is better)
Translates to: PYLLWTHHNQTS*QRLLSNCISLD
Trigger: GTCCAAAGAAATGCAATTTGAAAGGAGCCTTTGTCAAGATGTCTGGTTGTGATGAGTCCACAGAAGGTATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CCA 72 bp GAAACCTCATCACTGGTCATGATTTTGTCTACTTCTTaGAATTCACCGCATCCAGCTGAGAGATCTTTACTC +
Preference number: 6 (lower is better)
Translates to: ETSSLVMILSTS*NSPHPAERSLL
Trigger: GAGTAAAGATCTCTCAGCTGGATGCGGTGAATTCCAAGAAGTAGACAAAATCATGACCAGTGATGAGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000461722.1
CDS CCA 72 bp GAAAAGTCCTTGAGGACTCAGTCGTGCAATCTGAGCTaGATGATTTCACATGAAAGGATACTGGGAAGATTT +
Preference number: 6 (lower is better)
Translates to: EKSLRTQSCNLS*MISHERILGRF
Trigger: AAATCTTCCCAGTATCCTTTCATGTGAAATCATCCAGCTCAGATTGCACGACTGAGTCCTCAAGGACTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327423.11
ENST00000330495.8
ENST00000431684.1
CDS CAA 72 bp CAGACCAGGTTTGGTTTACACAACTCTTCCTTCCCATaGTCCACATTAGAAATGGCACTGTTTCCTGGTAAT +
Preference number: 6 (lower is better)
Translates to: QTRFGLHNSSFP*STLEMALFPGN
Trigger: ATTACCAGGAAACAGTGCCATTTCTAATGTGGACAATGGGAAGGAAGAGTTGTGTAAACCAAACCTGGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000461722.1
CDS CAA 72 bp AAGATTTCAGAACCAAACAGCAGGGACGGCATCTTGTaGCTCAAATCTATGAAGGTCATCTTGATGGATTCG +
Preference number: 6 (lower is better)
Translates to: KISEPNSRDGIL*LKSMKVILMDS
Trigger: CGAATCCATCAAGATGACCTTCATAGATTTGAGCAACAAGATGCCGTCCCTGCTGTTTGGTTCTGAAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS CAA 90 bp GTGGACTCATCACAACCAGACATCTTGACAAAGGCTCCTTTCAAATaGCATTTCTTTGGACTACCACAAGGTAGTGAGTTATTACTGCCT +
Preference number: 6 (lower is better)
Translates to: VDSSQPDILTKAPFK*HFFGLPQGSELLLP
Trigger: AGGCAGTAATAACTCACTACCTTGTGGTAGTCCAAAGAAATGCAATTTGAAAGGAGCCTTTGTCAAGATGTCTGGTTGTGATGAGTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CAA 90 bp ACGATGTCTACCATACCTTCTGTGGACTCATCACAACCAGACATCTaGACAAAGGCTCCTTTCAAATTGCATTTCTTTGGACTACCACAA +
Preference number: 6 (lower is better)
Translates to: TMSTIPSVDSSQPDI*TKAPFKLHFFGLPQ
Trigger: TTGTGGTAGTCCAAAGAAATGCAATTTGAAAGGAGCCTTTGTCAAGATGTCTGGTTGTGATGAGTCCACAGAAGGTATGGTAGACATCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 72 bp GATTTTGTCTACTTCTTGGAATTCACCGCATCCAGCTaGGAGATCTTTACTCACATTGCCATTTTTGTGTCC +
Preference number: 6 (lower is better)
Translates to: DFVYFLEFTASS*EIFTHIAIFVS
Trigger: GGACACAAAAATGGCAATGTGAGTAAAGATCTCTCAGCTGGATGCGGTGAATTCCAAGAAGTAGACAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000461722.1
CDS TCA 72 bp TACGCTGTCTCTGTCACTAGAATTACTCCAATCTCTTaGTACTATTTCCTTCATCTCAGGAAGGACTGTGCA +
Preference number: 6 (lower is better)
Translates to: YAVSVTRITPIS*YYFLHLRKDCA
Trigger: TGCACAGTCCTTCCTGAGATGAAGGAAATAGTATCAAGAGATTGGAGTAATTCTAGTGACAGAGACAGCGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 72 bp ATGGTGGACTCATCTTTGTCAGCCTTCGGTTGGTTCTaGTTTTGTGCATCATCTAACAACAGACTAGATGAT +
Preference number: 6 (lower is better)
Translates to: MVDSSLSAFGWF*FCASSNNRLDD
Trigger: ATCATCTAGTCTGTTGTTAGATGATGCACAAAATCAGAACCAACCGAAGGCTGACAAAGATGAGTCCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000431684.1
CDS GCA 72 bp TCAAATTCTGGGGATGGTAGCAACAGAGCAGTACCTTaGTTGGGTTTTAATACCTCACTTACAGGACTTATT +
Preference number: 6 (lower is better)
Translates to: SNSGDGSNRAVP*LGFNTSLTGLI
Trigger: AATAAGTCCTGTAAGTGAGGTATTAAAACCCAAGCAAGGTACTGCTCTGTTGCTACCATCCCCAGAATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CCA 72 bp ATTCTGGGGATGGTAGCAACAGAGCAGTACCTTGCTTaGGTTTTAATACCTCACTTACAGGACTTATTTGAT +
Preference number: 6 (lower is better)
Translates to: ILGMVATEQYLA*VLIPHLQDLFD
Trigger: ATCAAATAAGTCCTGTAAGTGAGGTATTAAAACCCAAGCAAGGTACTGCTCTGTTGCTACCATCCCCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CCA 72 bp GATTTCAGGCTTCTTAGGGAAACAGAGCTTTCATCATaGCAAGACATCGACTCTTTTGAGGAAATTCCAAAG +
Preference number: 6 (lower is better)
Translates to: DFRLLRETELSS*QDIDSFEEIPK
Trigger: CTTTGGAATTTCCTCAAAAGAGTCGATGTCTTGCCATGATGAAAGCTCTGTTTCCCTAAGAAGCCTGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CAA 72 bp AAAAAGATTTACTTAATATATTGGGCTCTACAGGGGTaGTCTGTCCTGCCTCTTCAATCTGCATCAAGGAGG +
Preference number: 6 (lower is better)
Translates to: KKIYLIYWALQG*SVLPLQSASRR
Trigger: CCTCCTTGATGCAGATTGAAGAGGCAGGACAGACAACCCCTGTAGAGCCCAATATATTAAGTAAATCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CAA 72 bp TTTTCTTACACGATGACAGCTAGAGATATCCTGAGATaGAACGCTGTGACATTCTATGACAGAGACCACTTG +
Preference number: 6 (lower is better)
Translates to: FSYTMTARDILR*NAVTFYDRDHL
Trigger: CAAGTGGTCTCTGTCATAGAATGTCACAGCGTTCAATCTCAGGATATCTCTAGCTGTCATCGTGTAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CAA 72 bp ACCATACCTTCTGTGGACTCATCACAACCAGACATCTaGACAAAGGCTCCTTTCAAATTGCATTTCTTTGGA +
Preference number: 6 (lower is better)
Translates to: TIPSVDSSQPDI*TKAPFKLHFFG
Trigger: TCCAAAGAAATGCAATTTGAAAGGAGCCTTTGTCAAGATGTCTGGTTGTGATGAGTCCACAGAAGGTATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CAA 90 bp ACTTCTTGGAATTCACCGCATCCAGCTGAGAGATCTTTACTCACATaGCCATTTTTGTGTCCTTCATTATTATCCGTCTTAGTCCCATTG +
Preference number: 6 (lower is better)
Translates to: TSWNSPHPAERSLLT*PFLCPSLLSVLVPL
Trigger: CAATGGGACTAAGACGGATAATAATGAAGGACACAAAAATGGCAATGTGAGTAAAGATCTCTCAGCTGGATGCGGTGAATTCCAAGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000461722.1
CDS CAA 90 bp GTAACTAATGTGCTGGTTTCTGAAACCTCATCACTGGTCATGATTTaGTCTACTTCTTGGAATTCACCGCATCCAGCTGAGAGATCTTTA +
Preference number: 6 (lower is better)
Translates to: VTNVLVSETSSLVMI*STSWNSPHPAERSL
Trigger: TAAAGATCTCTCAGCTGGATGCGGTGAATTCCAAGAAGTAGACAAAATCATGACCAGTGATGAGGTTTCAGAAACCAGCACATTAGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000461722.1
CDS CAA 90 bp ACATTGCCATTTTTGTGTCCTTCATTATTATCCGTCTTAGTCCCATaGACCTTCATACCTTGTACTTCGGCGGATTTTAGCAGAGTTTCA +
Preference number: 6 (lower is better)
Translates to: TLPFLCPSLLSVLVP*TFIPCTSADFSRVS
Trigger: TGAAACTCTGCTAAAATCCGCCGAAGTACAAGGTATGAAGGTCAATGGGACTAAGACGGATAATAATGAAGGACACAAAAATGGCAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000461722.1
CDS CAA 90 bp AATTCACCGCATCCAGCTGAGAGATCTTTACTCACATTGCCATTTTaGTGTCCTTCATTATTATCCGTCTTAGTCCCATTGACCTTCATA +
Preference number: 6 (lower is better)
Translates to: NSPHPAERSLLTLPF*CPSLLSVLVPLTFI
Trigger: TATGAAGGTCAATGGGACTAAGACGGATAATAATGAAGGACACAAAAATGGCAATGTGAGTAAAGATCTCTCAGCTGGATGCGGTGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000461722.1
CDS CAA 90 bp TGGCAAGACATCGACTCTTTTGAGGAAATTCCAAAGGTACTTTCTTaGCCAAACTCAGAGTTTGGTTCTAGTCTTGATCCTTCAGTCATT +
Preference number: 6 (lower is better)
Translates to: WQDIDSFEEIPKVLS*PNSEFGSSLDPSVI
Trigger: AATGACTGAAGGATCAAGACTAGAACCAAACTCTGAGTTTGGCAAAGAAAGTACCTTTGGAATTTCCTCAAAAGAGTCGATGTCTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CAA 90 bp TTCTTAGGGAAACAGAGCTTTCATCATGGCAAGACATCGACTCTTTaGAGGAAATTCCAAAGGTACTTTCTTTGCCAAACTCAGAGTTTG +
Preference number: 6 (lower is better)
Translates to: FLGKQSFHHGKTSTL*RKFQRYFLCQTQSL
Trigger: CAAACTCTGAGTTTGGCAAAGAAAGTACCTTTGGAATTTCCTCAAAAGAGTCGATGTCTTGCCATGATGAAAGCTCTGTTTCCCTAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS GCA 72 bp TCTCTGCCTGTTGCTAAAGGCATCTCTTTGTTTAAATaGAGTAGAGAGTCAGTTGGCAAATTTGCATGTTCT +
Preference number: 6 (lower is better)
Translates to: SLPVAKGISLFK*SRESVGKFACS
Trigger: AGAACATGCAAATTTGCCAACTGACTCTCTACTGCATTTAAACAAAGAGATGCCTTTAGCAACAGGCAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CAA 72 bp TTTTTGTGTCCTTCATTATTATCCGTCTTAGTCCCATaGACCTTCATACCTTGTACTTCGGCGGATTTTAGC +
Preference number: 6 (lower is better)
Translates to: FLCPSLLSVLVP*TFIPCTSADFS
Trigger: GCTAAAATCCGCCGAAGTACAAGGTATGAAGGTCAATGGGACTAAGACGGATAATAATGAAGGACACAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327423.11
ENST00000461722.1
CDS CAA 72 bp TTTGTTATCAAAGAGTTATCAACTTGCAGGCTGATTTaGCTGGACTTGAAAGCAGCAGAAGCAGAACACATG +
Preference number: 6 (lower is better)
Translates to: FVIKELSTCRLI*LDLKAAEAEHM
Trigger: CATGTGTTCTGCTTCTGCTGCTTTCAAGTCCAGCAAAATCAGCCTGCAAGTTGATAACTCTTTGATAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CAA 72 bp TCACAACCAGACATCTTGACAAAGGCTCCTTTCAAATaGCATTTCTTTGGACTACCACAAGGTAGTGAGTTA +
Preference number: 6 (lower is better)
Translates to: SQPDILTKAPFK*HFFGLPQGSEL
Trigger: TAACTCACTACCTTGTGGTAGTCCAAAGAAATGCAATTTGAAAGGAGCCTTTGTCAAGATGTCTGGTTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS GCA 72 bp TCGACTCTTTTGAGGAAATTCCAAAGGTACTTTCTTTaGCAAACTCAGAGTTTGGTTCTAGTCTTGATCCTT +
Preference number: 6 (lower is better)
Translates to: STLLRKFQRYFL*QTQSLVLVLIL
Trigger: AAGGATCAAGACTAGAACCAAACTCTGAGTTTGGCAAAGAAAGTACCTTTGGAATTTCCTCAAAAGAGTCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CAA 72 bp ATCGACTCTTTTGAGGAAATTCCAAAGGTACTTTCTTaGCCAAACTCAGAGTTTGGTTCTAGTCTTGATCCT +
Preference number: 6 (lower is better)
Translates to: IDSFEEIPKVLS*PNSEFGSSLDP
Trigger: AGGATCAAGACTAGAACCAAACTCTGAGTTTGGCAAAGAAAGTACCTTTGGAATTTCCTCAAAAGAGTCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CAA 72 bp AAACAGAGCTTTCATCATGGCAAGACATCGACTCTTTaGAGGAAATTCCAAAGGTACTTTCTTTGCCAAACT +
Preference number: 6 (lower is better)
Translates to: KQSFHHGKTSTL*RKFQRYFLCQT
Trigger: AGTTTGGCAAAGAAAGTACCTTTGGAATTTCCTCAAAAGAGTCGATGTCTTGCCATGATGAAAGCTCTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS CAA 90 bp GGCTATCATTTAAAGACAAATTTACTCTGCCCAATATTCTTTTATTaGGTTCATGATCTGCAACAGACTCCATCTCATGGGCACAAGAGT +
Preference number: 6 (lower is better)
Translates to: GYHLKTNLLCPIFFY*VHDLQQTPSHGHKS
Trigger: ACTCTTGTGCCCATGAGATGGAGTCTGTTGCAGATCATGAACCAAATAAAAGAATATTGGGCAGAGTAAATTTGTCTTTAAATGATAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS GCA 72 bp CATTGGTACAAGAAAGTTCATTCATCTCACAGGCTATaGTCTGTTCATCTAAAAGTGGAATATCATCATGTG +
Preference number: 6 (lower is better)
Translates to: HWYKKVHSSHRL*SVHLKVEYHHV
Trigger: CACATGATGATATTCCACTTTTAGATGAACAGAGCATAGCCTGTGAGATGAATGAACTTTCTTGTACCAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327423.11
CDS TCA 72 bp TGCTTGGGTTTTAATACCTCACTTACAGGACTTATTTaGTCCTCTGGCATTAAACTCACAATGGATTTTCTT +
Preference number: 6 (lower is better)
Translates to: CLGFNTSLTGLI*SSGIKLTMDFL
Trigger: AAGAAAATCCATTGTGAGTTTAATGCCAGAGGATCAAATAAGTCCTGTAAGTGAGGTATTAAAACCCAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327423.11