RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRPSAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000141127

Ensembl transcript IDs: ENST00000268835.7, ENST00000395656.6, ENST00000412418.5, ENST00000414602.5, ENST00000419071.6, ENST00000419284.6, ENST00000422237.5, ENST00000432893.6, ENST00000441887.5, ENST00000455992.6, ENST00000460724.1, ENST00000466106.1, ENST00000478622.6, ENST00000487101.5, ENST00000492129.5, ENST00000536323.5, ENST00000542013.5, ENST00000570450.5, ENST00000571907.5, ENST00000573253.5, ENST00000573432.5, ENST00000574451.5, ENST00000574522.5, ENST00000575102.5, ENST00000575228.5, ENST00000575337.2, ENST00000576355.5, ENST00000610773.4, ENST00000628609.1

Found 526 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTaGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGC +
Preference number: 1 (lower is better)
Translates to: DLQAGVDGSHTSDHG*GMPSIHQVRLGILR
Trigger: GCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
3UTR TCA 90 bp TGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATaGATCACTGCAATTCCCAGGCGCAGGCGCTCAGCAAAAGACTGT +
Preference number: 1 (lower is better)
Translates to: CRPSTKSDSASCASP*ITAIPRRRRSAKDC
Trigger: ACAGTCTTTTGCTGAGCGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
3UTR CCA 90 bp ATCCACAGTTTTAATCTTGGGGCACTGGAGCTTCTGGACTTCATGTaGAATTGTATTGGTGACCACCACCTCATCAATGGCAGACTCTTC +
Preference number: 1 (lower is better)
Translates to: IHSFNLGALELLDFM*NCIGDHHLINGRLF
Trigger: GAAGAGTCTGCCATTGATGAGGTGGTGGTCACCAATACAATTCCACATGAAGTCCAGAAGCTCCAGTGCCCCAAGATTAAAACTGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR GCA 90 bp TGCCATCACAAAGATCTTATATGCACCTCTTTCCTTCAGGGTCTCTaGTGCAGCAAGAAAGCTGTCAACATCATCAATGATGTCATCCAC +
Preference number: 1 (lower is better)
Translates to: CHHKDLICTSFLQGL*CSKKAVNIINDVIH
Trigger: GTGGATGACATCATTGATGATGTTGACAGCTTTCTTGCTGCAGCAGAGACCCTGAAGGAAAGAGGTGCATATAAGATCTTTGTGATGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR GCA 90 bp CATCACAAAGATCTTATATGCACCTCTTTCCTTCAGGGTCTCTGCTaGAGCAAGAAAGCTGTCAACATCATCAATGATGTCATCCACGAT +
Preference number: 1 (lower is better)
Translates to: HHKDLICTSFLQGLC*SKKAVNIINDVIHD
Trigger: ATCGTGGATGACATCATTGATGATGTTGACAGCTTTCTTGCTGCAGCAGAGACCCTGAAGGAAAGAGGTGCATATAAGATCTTTGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR TCA 90 bp GGGATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTGGGGAATCCTGCGCCTCTCCATaGATCACTGCAATTCCCAGG +
Preference number: 2 (lower is better)
Translates to: GISRLGWMAATLLTMGGESCASP*ITAIPR
Trigger: CCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGA...TTCCCCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
3UTR-3UTR GCA 90 bp GATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTGGGGAATGCTCTCCATGAATCACTaGAATTCCCAGGCGCAGGCG +
Preference number: 2 (lower is better)
Translates to: DLQAGVDGSHTSDHGWGMLSMNH*NSQAQA
Trigger: CGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAG...CATTCCCCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
3UTR-3UTR TCA 90 bp GGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCTGGAAGAAGGCTTTGTaGGCTTACAAATCTTATTCC +
Preference number: 2 (lower is better)
Translates to: GWGMPSIHQVRLGILRLSWKKAL*AYKSYS
Trigger: GGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCA...GGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR TCA 90 bp AGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGGGTATCACGCCAATaGTGCTCTTGGCACAAGAGG +
Preference number: 2 (lower is better)
Translates to: RGEGGTSMTVPVKSIPPSRVSRQ*CSWHKR
Trigger: CCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCT...GCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR TCA 90 bp GGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCTCCATAGTAATAAGATaGGTTAGACCAGCTTTGCAC +
Preference number: 2 (lower is better)
Translates to: GWGMPSIHQVRLGILRLSSIVIR*VRPALH
Trigger: GTGCAAAGCTGGTCTAACTCATCTTATTACTATGGA...GGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
3UTR-3UTR CCA 90 bp AGGGTCTCTGCTGCAGCAAGAAAGCTGTCAACATCATCAATGATGTCATCCACGTGGGGATCTCCAGGCTaGGGTGGATGGCAGCCACAC +
Preference number: 2 (lower is better)
Translates to: RVSAAARKLSTSSMMSSTWGSPG*GGWQPH
Trigger: GTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCA...CGTGGATGACATCATTGATGATGTTGACAGCTTTCTTGCTGCAGCAGAGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR TCA 90 bp TCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATGTCTACATACCACGATaGTGGCAATCCTTCCTCCAA +
Preference number: 2 (lower is better)
Translates to: SIHQVRLGILRLSMNHCNVYIPR*WQSFLQ
Trigger: TTGGAGGAAGGATTGCCATCATCGTGGTATGTAGAC...ATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455992.6
3UTR-3UTR GCA 90 bp CACCATGATCAGGAGCTCCATGATGGTGGTGTTCACGTCCTTCGAAACAGTTTGGGTAAACCTGCACTTTaGCCATCTCCACCCCTAGCC +
Preference number: 2 (lower is better)
Translates to: HHDQELHDGGVHVLRNSLGKPAL*PSPPLA
Trigger: GGCTAGGGGTGGAGATGGGCAAAGTGCAGGTTTACC...CAAACTGTTTCGAAGGACGTGAACACCACCATCATGGAGCTCCTGATCATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573253.5
3UTR-3UTR CCA 90 bp TGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCACCGACATAAAAAGTTaGTCTATCTTCTTAGGAATC +
Preference number: 2 (lower is better)
Translates to: WVGNAVHPPSPTRHPAPLTDIKS*SIFLGI
Trigger: GATTCCTAAGAAGATAGACCAACTTTTTATGTCGGT...GAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR TCA 90 bp CATGATCAGGAGCTCCATGATGGTGGTGTTCACGTCCTTCGAAACAGTTTGGATAGGGTATCACGCCAATaGTGCTCTTGGCACAAGAGG +
Preference number: 2 (lower is better)
Translates to: HDQELHDGGVHVLRNSLDRVSRQ*CSWHKR
Trigger: CCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCT...ATCCAAACTGTTTCGAAGGACGTGAACACCACCATCATGGAGCTCCTGATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573253.5
3UTR-3UTR CCA 90 bp GGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACTTATGTTTCCAGTTTaGCCCTCGGGAGTTTTCCTA +
Preference number: 2 (lower is better)
Translates to: GYRGEGGTSMTVPVKSIPLMFPV*PSGVFL
Trigger: TAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAG...TGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
3UTR-3UTR TCA 90 bp CCTCTTCGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGTCCATAGTAATAAGATaGGTTAGACCAGCTTTGCAC +
Preference number: 2 (lower is better)
Translates to: PLRRGWRLGHDYCIPVIWSIVIR*VRPALH
Trigger: GTGCAAAGCTGGTCTAACTCATCTTATTACTATGGA...CCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
3UTR-3UTR GCA 90 bp CAACAAGCCATGAGTTGCCATCACAAAGATCTTATATGCACCTCTTTCCTTCAGACCATGGGTGGGGAATaGCGTCCATCCACCAAGTCC +
Preference number: 2 (lower is better)
Translates to: QQAMSCHHKDLICTSFLQTMGGE*RPSTKS
Trigger: GGACTTGGTGGATGGACGGCATTCCCCACCCATGGT...CTGAAGGAAAGAGGTGCATATAAGATCTTTGTGATGGCAACTCATGGCTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR CCA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCTTATGTTTCCAGTTTaGCCCTCGGGAGTTTTCCTA +
Preference number: 2 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHLMFPV*PSGVFL
Trigger: TAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAG...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
3UTR CAA 90 bp CCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTaGGCCCTCGGGAGTTTTCCTAAAGGAAAACTCAGTCATCTAAGC +
Preference number: 2 (lower is better)
Translates to: PVKSIPPSSHSYVSS*ALGSFPKGKLSHLS
Trigger: GCTTAGATGACTGAGTTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR TCA 90 bp AGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTCTTCTTGGAATCAATAAGAAGTaGGGTTACAGGGGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: RLETWPRLLHSCNLGSLLGINKK*GYRGEG
Trigger: TCCCTCTCCCCTGTAACCTCACTTCTTATTGATTCC...AAGAAGAGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR TCA 90 bp CGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTCATATTGAAGAAGCCCTaGATTTCCTTCTGGTGTAAA +
Preference number: 2 (lower is better)
Translates to: RRGWRLGHDYCIPVIWDLILKKP*ISFWCK
Trigger: TTTACACCAGAAGGAAATTCAGGGCTTCTTCAATAT...GAGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
3UTR-3UTR TCA 90 bp TCGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTTGTCAACAGGAATATTaGAGAAGCCCTGAATTTCCT +
Preference number: 2 (lower is better)
Translates to: SPRLETWPRLLHSCNLGSCQQEY*RSPEFP
Trigger: AGGAAATTCAGGGCTTCTTCAATATTCCTGTTGACA...AGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
3UTR-3UTR GCA 90 bp ACCATGATCAGGAGCTCCATGATGGTGGTGTTCACGTCCTTCGAAACAGTTTGGTCATCTTGCACTGCTTaGTGTAAGGAAAGTAGGGTA +
Preference number: 2 (lower is better)
Translates to: TMIRSSMMVVFTSFETVWSSCTA*CKESRV
Trigger: TACCCTACTTTCCTTACAGCAAGCAGTGCAAGATGA...CCAAACTGTTTCGAAGGACGTGAACACCACCATCATGGAGCTCCTGATCATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573253.5
3UTR-3UTR CCA 90 bp GGCTCAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTCCGAGGCTGGAGACTTaGCCACGATTACTGCATTCC +
Preference number: 2 (lower is better)
Translates to: GSSNFGRRLCELTNLIPSPRLET*PRLLHS
Trigger: GGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGG...ACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR CCA 90 bp GGCTCAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTATGGACTCCCCATTGTaGATCCGACGGATCGCCTCT +
Preference number: 2 (lower is better)
Translates to: GSSNFGRRLCELTNLIPSMDSPL*IRRIAS
Trigger: AGAGGCGATCCGTCGGATCCACAATGGGGAGTCCAT...ACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR TCA 90 bp TTTGCACATCATGGAAGCCAGCAATTTAGAGACAATGGAGCCTCTTTTTCTCATAGGGTATCACGCCAATaGTGCTCTTGGCACAAGAGG +
Preference number: 2 (lower is better)
Translates to: FAHHGSQQFRDNGASFSHRVSRQ*CSWHKR
Trigger: CCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCT...ATGAGAAAAAGAGGCTCCATTGTCTCTAAATTGCTGGCTTCCATGATGTGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
3UTR-3UTR TCA 90 bp GGTCTCTGCTGCAGCAAGAAAGCTGTCAACATCATCAATGATGTCATCCACGATTGTCAACAGGAATATTaGAGAAGCCCTGAATTTCCT +
Preference number: 2 (lower is better)
Translates to: GLCCSKKAVNIINDVIHDCQQEY*RSPEFP
Trigger: AGGAAATTCAGGGCTTCTTCAATATTCCTGTTGACA...ATCGTGGATGACATCATTGATGATGTTGACAGCTTTCTTGCTGCAGCAGAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR TCA 90 bp CACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAAAACTCAGTATATTGAAGAAGCCCTaGATTTCCTTCTGGTGTAAA +
Preference number: 2 (lower is better)
Translates to: HSYVSSLALGSFPKGKLSILKKP*ISFWCK
Trigger: TTTACACCAGAAGGAAATTCAGGGCTTCTTCAATAT...ACTGAGTTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR TCA 90 bp CATGATGGTGGTGTTCACGTCCTTCGAAACAGTTTGGATGATGAAAACATCTTTCCCCTCACAGACTCTTaGATTTGTACTCTTGTTTCT +
Preference number: 2 (lower is better)
Translates to: HDGGVHVLRNSLDDENIFPLTDS*ICTLVS
Trigger: AGAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGG...AAAGATGTTTTCATCATCCAAACTGTTTCGAAGGACGTGAACACCACCATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573253.5
3UTR-3UTR CCA 90 bp GGCTCAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTCTTCTGGACTTCATGTaGAATTGTATTGGTGACCAC +
Preference number: 2 (lower is better)
Translates to: GSSNFGRRLCELTNLIPSLLDFM*NCIGDH
Trigger: GTGGTCACCAATACAATTCCACATGAAGTCCAGAAG...ACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR TCA 90 bp AGACAACAAGCCATGAGTTGCCATCACAAAGATCTTATATGCACCTCTTTCCTTTGTCAACAGGAATATTaGAGAAGCCCTGAATTTCCT +
Preference number: 2 (lower is better)
Translates to: RQQAMSCHHKDLICTSFLCQQEY*RSPEFP
Trigger: AGGAAATTCAGGGCTTCTTCAATATTCCTGTTGACA...AAGGAAAGAGGTGCATATAAGATCTTTGTGATGGCAACTCATGGCTTGTTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR CCA 90 bp CAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTGTTACTTATGTTTCCAGTTTaGCCCTCGGGAGTTTTCCTA +
Preference number: 2 (lower is better)
Translates to: QATLEEGFVSLQILFQVLLMFPV*PSGVFL
Trigger: TAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAG...TAACACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
3UTR-3UTR CCA 90 bp CACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAAAACTCAGTACCGACATAAAAAGTTaGTCTATCTTCTTAGGAATC +
Preference number: 2 (lower is better)
Translates to: HSYVSSLALGSFPKGKLSTDIKS*SIFLGI
Trigger: GATTCCTAAGAAGATAGACCAACTTTTTATGTCGGT...ACTGAGTTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR TCA 90 bp CTGGGATCTCTTCTTGAATATACTGTAATAAGAAGGGAGATGCTCTTAAATTGTATATTGAAGAAGCCCTaGATTTCCTTCTGGTGTAAA +
Preference number: 2 (lower is better)
Translates to: LGSLLEYTVIRREMLLNCILKKP*ISFWCK
Trigger: TTTACACCAGAAGGAAATTCAGGGCTTCTTCAATAT...ACAATTTAAGAGCATCTCCCTTCTTATTACAGTATATTCAAGAAGAGATCCCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
3UTR CCA 72 bp GCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTaGGGAATGCCGTCCATCCACCAAGTCCGACTCGGC +
Preference number: 3 (lower is better)
Translates to: AGVDGSHTSDHG*GMPSIHQVRLG
Trigger: GCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
3UTR TCA 72 bp TCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATaGATCACTGCAATTCCCAGGCGCAGGCGCTCAGCA +
Preference number: 3 (lower is better)
Translates to: STKSDSASCASP*ITAIPRRRRSA
Trigger: TGCTGAGCGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
3UTR TCA 72 bp GGATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTaGCCATGGGTGGGGAATGCCGTCCATCCACCAAGT +
Preference number: 3 (lower is better)
Translates to: GSPGWGGWQPHF*PWVGNAVHPPS
Trigger: ACTTGGTGGATGGACGGCATTCCCCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
3UTR GCA 72 bp TGGATGGCAGCCACACTTCTGACCATGGGTGGGGAATaGCGTCCATCCACCAAGTCCGACTCGGCATCCTGC +
Preference number: 3 (lower is better)
Translates to: WMAATLLTMGGE*RPSTKSDSASC
Trigger: GCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTCAGAAGTGTGGCTGCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
3UTR GCA 72 bp GTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTaGAATTCCCAGGCGCAGGCGCTCAGCAAAAGACTG +
Preference number: 3 (lower is better)
Translates to: VRLGILRLSMNH*NSQAQALSKRL
Trigger: CAGTCTTTTGCTGAGCGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
3UTR-3UTR CAA 90 bp GGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCTCTTATGTTTCCAGTTaGGCCCTCGGGAGTTTTCCT +
Preference number: 3 (lower is better)
Translates to: GWGMPSIHQVRLGILRLSSYVSS*ALGSFP
Trigger: AGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGA...GGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR CCA 72 bp GCGCTCAGCAAAAGACTGTGCCCTCTTCGCCGAGGCTaGAGACTTGGCCACGATTACTGCATTCCTGTAATC +
Preference number: 3 (lower is better)
Translates to: ALSKRLCPLRRG*RLGHDYCIPVI
Trigger: GATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGGGCACAGTCTTTTGCTGAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
3UTR-3UTR CAA 90 bp GGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCTTATGTTTCCAGTTaGGCCCTCGGGAGTTTTCCT +
Preference number: 3 (lower is better)
Translates to: GRGRNKHDGSCEIHPTEQSYVSS*ALGSFP
Trigger: AGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGA...CTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
3UTR-3UTR CAA 90 bp AGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCTCTTATGTTTCCAGTTaGGCCCTCGGGAGTTTTCCT +
Preference number: 3 (lower is better)
Translates to: RLQGRGRNKHDGSCEIHPSYVSS*ALGSFP
Trigger: AGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGA...GGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
3UTR-3UTR CAA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATTCTTATGTTTCCAGTTaGGCCCTCGGGAGTTTTCCT +
Preference number: 3 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHSYVSS*ALGSFP
Trigger: AGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGA...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
3UTR GCA 72 bp CACGCCAATGATGCTCTTGGCACAAGAGGTCTTACATaGATACACCATGATCAGGAGCTCCATGATGGTGGT +
Preference number: 3 (lower is better)
Translates to: HANDALGTRGLT*IHHDQELHDGG
Trigger: ACCACCATCATGGAGCTCCTGATCATGGTGTATGCATGTAAGACCTCTTGTGCCAAGAGCATCATTGGCGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573253.5
3UTR CCA 72 bp CCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTaGCCCTCGGGAGTTTTCCTAAAGGAAAACTCAGTC +
Preference number: 3 (lower is better)
Translates to: PSHRAVTLMFPV*PSGVFLKENSV
Trigger: GACTGAGTTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR CAA 90 bp AAGACTGTGCCCTCTTCGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCGGAGATGCTCTTAAATaGTCAACAGGAATATTGAAG +
Preference number: 3 (lower is better)
Translates to: KTVPSSPRLETWPRLLHSGDALK*STGILK
Trigger: CTTCAATATTCCTGTTGACAATTTAAGAGCATCTCC...GGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGGGCACAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
3UTR GCA 72 bp CCTCTTCGCCGAGGCTGGAGACTTGGCCACGATTACTaGATTCCTGTAATCTGGGATCTCTTCTTGAATATA +
Preference number: 3 (lower is better)
Translates to: PLRRGWRLGHDY*IPVIWDLFLNI
Trigger: TATATTCAAGAAGAGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
3UTR-3UTR CAA 90 bp CATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTTTTCGGCTTTTCAATaGCAGGTATCATACAGATCA +
Preference number: 3 (lower is better)
Translates to: HPTEQSLLCFQFGPREFSFSAFQ*QVSYRS
Trigger: TGATCTGTATGATACCTGCAATTGAAAAGCCGAAAA...GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
3UTR CCA 72 bp TTTAATCTTGGGGCACTGGAGCTTCTGGACTTCATGTaGAATTGTATTGGTGACCACCACCTCATCAATGGC +
Preference number: 3 (lower is better)
Translates to: FNLGALELLDFM*NCIGDHHLING
Trigger: GCCATTGATGAGGTGGTGGTCACCAATACAATTCCACATGAAGTCCAGAAGCTCCAGTGCCCCAAGATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR CAA 90 bp CATGATCAGGAGCTCCATGATGGTGGTGTTCACGTCCTTCGAAACAGTTTGGATTCCCCTCACAGACTCTaGAATTTGTACTCTTGTTTC +
Preference number: 3 (lower is better)
Translates to: HDQELHDGGVHVLRNSLDSPHRL*NLYSCF
Trigger: GAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGGA...ATCCAAACTGTTTCGAAGGACGTGAACACCACCATCATGGAGCTCCTGATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573253.5
3UTR-3UTR CAA 90 bp AGAAAGCTGTCAACATCATCAATGATGTCATCCACGATGATGGCAATCCTTCCTTCTTATGTTTCCAGTTaGGCCCTCGGGAGTTTTCCT +
Preference number: 3 (lower is better)
Translates to: RKLSTSSMMSSTMMAILPSYVSS*ALGSFP
Trigger: AGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGA...AGGAAGGATTGCCATCATCGTGGATGACATCATTGATGATGTTGACAGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR CAA 90 bp AGAAAGCTGTCAACATCATCAATGATGTCATCCACGATGATGGCAATCCTTCCTTTGGCTCAAGCAACTTaGGAAGAAGGCTTTGTGAGC +
Preference number: 3 (lower is better)
Translates to: RKLSTSSMMSSTMMAILPLAQAT*EEGFVS
Trigger: GCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCCAA...AGGAAGGATTGCCATCATCGTGGATGACATCATTGATGATGTTGACAGCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR-3UTR CAA 90 bp GGCTCAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTTCATGTGGAATTGTATaGGTGACCACCACCTCATCA +
Preference number: 3 (lower is better)
Translates to: GSSNFGRRLCELTNLIPSSCGIV*VTTTSS
Trigger: TGATGAGGTGGTGGTCACCAATACAATTCCACATGA...ACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
3UTR TCA 72 bp AGAAGGGAGATGCTCTTAAATTGTCAACAGGAATATTaGAGAAGCCCTGAATTTCCTTCTGGTGTAAATCCA +
Preference number: 3 (lower is better)
Translates to: RREMLLNCQQEY*RSPEFPSGVNP
Trigger: TGGATTTACACCAGAAGGAAATTCAGGGCTTCTTCAATATTCCTGTTGACAATTTAAGAGCATCTCCCTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp GGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCCCTCTTCGCCGAGGCTaGAGACTTGGCCACGATTAC +
Preference number: 4 (lower is better)
Translates to: GWGMPSIHQVRLGILRLSPLRRG*RLGHDY
Trigger: GTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGG...GGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR TCA 90 bp GGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTGATTGGCGTCCGCGGTaGCTGCGAGGCCGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: GGTSMTVPVKSIPPSSHSDWRPR*LRGRWA
Trigger: CGCCCACCGGCCTCGCAGTCACCGCGGACGCCAATC...AGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536323.5
CDS-3UTR CCA 90 bp CATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCCCTCTTCGCCGAGGCTaGAGACTTGGCCACGATTAC +
Preference number: 4 (lower is better)
Translates to: HGWGMPSIHQVRLGILRLPLRRG*RLGHDY
Trigger: GTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGG...GAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp ACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCATCTCCAGGCTGGGGTaGATGGCAGCCACACTTCTG +
Preference number: 4 (lower is better)
Translates to: TMGGECRPSTKSDSASCAISRLG*MAATLL
Trigger: CAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGAT...GGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR TCA 90 bp GCCACACTTCTGACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGTGGCAGCCACACTTCTaGCCATGGGTGGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: ATLLTMGGECRPSTKSDSWQPHF*PWVGNA
Trigger: GGCATTCCCCACCCATGGTCAGAAGTGTGGCTGCCA...CGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTCAGAAGTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp ACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCCTCTCCATGAATCACTaGAATTCCCAGGCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: TMGGECRPSTKSDSASCALSMNH*NSQAQA
Trigger: CGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAG...GGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp TGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCTCTCCATGAATCACTaGAATTCCCAGGCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: WVGNAVHPPSPTRHPAPLLSMNH*NSQAQA
Trigger: CGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAG...GAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp GGGATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTGGGGAAACCATGGGTGGGGAATaGCGTCCATCCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GISRLGWMAATLLTMGGETMGGE*RPSTKS
Trigger: GGACTTGGTGGATGGACGGCATTCCCCACCCATGGT...TTCCCCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp CGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCCCAGGCGCAGGCGACCATGGGTGGGGAATaGCGTCCATCCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: RLGILRLSMNHCNSQAQATMGGE*RPSTKS
Trigger: GGACTTGGTGGATGGACGGCATTCCCCACCCATGGT...CGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp ACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCCCGAGGCTGGAGACTTaGCCACGATTACTGCATTCC +
Preference number: 4 (lower is better)
Translates to: TMGGECRPSTKSDSASCAPRLET*PRLLHS
Trigger: GGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGG...GGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR TCA 90 bp CATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCAGGGTATCACGCCAATaGTGCTCTTGGCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: HGWGMPSIHQVRLGILRLRVSRQ*CSWHKR
Trigger: CCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCT...GAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR TCA 90 bp GGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATTGGCAGCCACACTTCTaGCCATGGGTGGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: GMPSIHQVRLGILRLSMNWQPHF*PWVGNA
Trigger: GGCATTCCCCACCCATGGTCAGAAGTGTGGCTGCCA...ATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp ATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCTCTCCATGAATCACTaGAATTCCCAGGCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: MGGECRPSTKSDSASCASLSMNH*NSQAQA
Trigger: CGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAG...AGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp GCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCCTCTTCGCCGAGGCTaGAGACTTGGCCACGATTAC +
Preference number: 4 (lower is better)
Translates to: AVHPPSPTRHPAPLHESLPLRRG*RLGHDY
Trigger: GTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGG...CAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp CGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCCCAGGCGCAGGCGACTTCTGACCATGGGTaGGGAATGCCGTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: RLGILRLSMNHCNSQAQATSDHG*GMPSIH
Trigger: GTGGATGGACGGCATTCCCCACCCATGGTCAGAAGT...CGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp CAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCCACTGCACTCCAGGTaGGGATCTCCAGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QGRGRNKHDGSCEIHPTEPLHSR*GSPGWG
Trigger: ACCCCAGCCTGGAGATCCCCACCTGGAGTGCAGTGG...CTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574451.5
CDS-3UTR TCA 90 bp GATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTGGGGAATGTCCTGCGCCTCTCCATaGATCACTGCAATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: DLQAGVDGSHTSDHGWGMSCASP*ITAIPR
Trigger: CCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGA...CATTCCCCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR TCA 90 bp GGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTGGCAGCCACACTTCTaGCCATGGGTGGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: GRGRNKHDGSCEIHPTEQWQPHF*PWVGNA
Trigger: GGCATTCCCCACCCATGGTCAGAAGTGTGGCTGCCA...CTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTGGGGAATGCCGAGGCTGGAGACTTaGCCACGATTACTGCATTCC +
Preference number: 4 (lower is better)
Translates to: DLQAGVDGSHTSDHGWGMPRLET*PRLLHS
Trigger: GGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGG...CATTCCCCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp GCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCCGAGGCTGGAGACTTaGCCACGATTACTGCATTCC +
Preference number: 4 (lower is better)
Translates to: AVHPPSPTRHPAPLHESLPRLET*PRLLHS
Trigger: GGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGG...CAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp ACTTCTGACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCATCTCCAGGCTGGGGTaGATGGCAGCCACACTTCTG +
Preference number: 4 (lower is better)
Translates to: TSDHGWGMPSIHQVRLGIISRLG*MAATLL
Trigger: CAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGAT...GATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTCAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp ATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCCTGGGGATCTCCAGGCTaGGGTGGATGGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: IHQVRLGILRLSMNHCNSWGSPG*GGWQPH
Trigger: GTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCA...GGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp CGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCCCAGGCGCAGGCGCTCAGCCACCACCTCATCAATaGCAGACTCTTCAATCCGCC +
Preference number: 4 (lower is better)
Translates to: RHPAPLHESLQFPGAGAQPPPHQ*QTLQSA
Trigger: GGCGGATTGAAGAGTCTGCCATTGATGAGGTGGTGG...CTGAGCGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CCA 90 bp AGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACAGCGGTACCTCGGCTaGGCTCACGTCCCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: RGRNKHDGSCEIHPTEQSQRYLG*AHVPSA
Trigger: CGCAGAAGGGACGTGAGCCCAGCCGAGGTACCGCTG...TGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419071.6
ENST00000492129.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GGGATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTGGGGAAGGTTCAAGCCTCCACTaGCCTGTAACCTTGGACAAG +
Preference number: 4 (lower is better)
Translates to: GISRLGWMAATLLTMGGEGSSLH*PVTLDK
Trigger: CTTGTCCAAGGTTACAGGCCAGTGGAGGCTTGAACC...TTCCCCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487101.5
CDS-3UTR TCA 90 bp TCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTGGCAGCCACACTTCTaGCCATGGGTGGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: SIHQVRLGILRLSMNHCNWQPHF*PWVGNA
Trigger: GGCATTCCCCACCCATGGTCAGAAGTGTGGCTGCCA...ATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR TCA 90 bp CATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCGGAATCAATAAGAAGTaGGGTTACAGGGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: HGWGMPSIHQVRLGILRLGINKK*GYRGEG
Trigger: TCCCTCTCCCCTGTAACCTCACTTCTTATTGATTCC...GAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR GCA 90 bp GGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATGGTAAACCTGCACTTTaGCCATCTCCACCCCTAGCC +
Preference number: 4 (lower is better)
Translates to: GMPSIHQVRLGILRLSMNGKPAL*PSPPLA
Trigger: GGCTAGGGGTGGAGATGGGCAAAGTGCAGGTTTACC...ATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455992.6
CDS-3UTR GCA 90 bp GGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGACCATGGGTGGGGAATaGCGTCCATCCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GRGRNKHDGSCEIHPTEQTMGGE*RPSTKS
Trigger: GGACTTGGTGGATGGACGGCATTCCCCACCCATGGT...CTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp ACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCATCTGGGATCAGCTTTaGACATCATGGAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TMGGECRPSTKSDSASCAIWDQL*TSWKPA
Trigger: TGCTGGCTTCCATGATGTGCAAAGCTGATCCCAGAT...GGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455992.6
CDS-3UTR CCA 90 bp CAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGATCTCCAGGCTGGGGTaGATGGCAGCCACACTTCTG +
Preference number: 4 (lower is better)
Translates to: QGRGRNKHDGSCEIHPTEISRLG*MAATLL
Trigger: CAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGAT...CTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCATGGGGATCTCCAGGCTaGGGTGGATGGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: RGRNKHDGSCEIHPTEQSWGSPG*GGWQPH
Trigger: GTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCA...TGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCTGGGGATCTCCAGGCTaGGGTGGATGGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: RLQGRGRNKHDGSCEIHPWGSPG*GGWQPH
Trigger: GTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCA...GGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp TCGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTTGGGGATCTCCAGGCTaGGGTGGATGGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: SPRLETWPRLLHSCNLGSWGSPG*GGWQPH
Trigger: GTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCA...AGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp CATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTGGGGATCTCCAGGCTaGGGTGGATGGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: HPTEQSLLCFQFGPREFSWGSPG*GGWQPH
Trigger: GTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCA...GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCCAGCACTGGGCATGGTaGCATGTACCGGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RGEGGTSMTVPVKSIPPSQHWAW*HVPVVP
Trigger: TGGGACTACCGGTACATGCCACCATGCCCAGTGCTG...GCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574451.5
CDS-3UTR TCA 90 bp CATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCCAAGAAAGGCGGAGCTaGAGAGCTCAATGTTTTACT +
Preference number: 4 (lower is better)
Translates to: HGWGMPSIHQVRLGILRLQERRS*RAQCFT
Trigger: AGTAAAACATTGAGCTCTTCAGCTCCGCCTTTCTTG...GAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR TCA 90 bp AGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCTCCTGCGCCTCTCCATaGATCACTGCAATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RGEGGTSMTVPVKSIPPSSCASP*ITAIPR
Trigger: CCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGA...GCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTGGCAGCCACACTTCTaGCCATGGGTGGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: GGTSMTVPVKSIPPSSHSWQPHF*PWVGNA
Trigger: GGCATTCCCCACCCATGGTCAGAAGTGTGGCTGCCA...AGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTGGCAGCCACACTTCTaGCCATGGGTGGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: EIHPTEQSLLCFQFGPREWQPHF*PWVGNA
Trigger: GGCATTCCCCACCCATGGTCAGAAGTGTGGCTGCCA...CTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp TCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCGCCGCAGCCTCAGCTaGAGAAGGAAGAAAGCGCCG +
Preference number: 4 (lower is better)
Translates to: SIPPSSHSYVSSLALGSFRRSLS*RRKKAP
Trigger: CGGCGCTTTCTTCCTTCTGCAGCTGAGGCTGCGGCG...AAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000536323.5
CDS-3UTR GCA 90 bp GGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCTCATCTTGCACTGCTTaGTGTAAGGAAAGTAGGGTA +
Preference number: 4 (lower is better)
Translates to: GWGMPSIHQVRLGILRLSSSCTA*CKESRV
Trigger: TACCCTACTTTCCTTACAGCAAGCAGTGCAAGATGA...GGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp GGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGCTCTCCATGAATCACTaGAATTCCCAGGCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GRGRNKHDGSCEIHPTEQLSMNH*NSQAQA
Trigger: CGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAG...CTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CCTCTTCGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGCCTCTTCGCCGAGGCTaGAGACTTGGCCACGATTAC +
Preference number: 4 (lower is better)
Translates to: PLRRGWRLGHDYCIPVIWPLRRG*RLGHDY
Trigger: GTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGG...CCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp AGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCACTTCTGACCATGGGTaGGGAATGCCGTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: RGEGGTSMTVPVKSIPPSTSDHG*GMPSIH
Trigger: GTGGATGGACGGCATTCCCCACCCATGGTCAGAAGT...GCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCACCCACAACCGTGATTaGGGGCTTTTCTTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: DHGWGMPSIHQVRLGILRTHNRD*GLFFRN
Trigger: ATTCCTAAAGAAAAGCCCCCAATCACGGTTGTGGGT...GCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000492129.5
CDS-3UTR CCA 90 bp GGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCCACCACCTCATCAATaGCAGACTCTTCAATCCGCC +
Preference number: 4 (lower is better)
Translates to: GMPSIHQVRLGILRLSMNPPPHQ*QTLQSA
Trigger: GGCGGATTGAAGAGTCTGCCATTGATGAGGTGGTGG...ATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR TCA 90 bp GGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGAGGGTATCACGCCAATaGTGCTCTTGGCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: GRGRNKHDGSCEIHPTEQRVSRQ*CSWHKR
Trigger: CCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCT...CTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCTCCTGCGCCTCTCCATaGATCACTGCAATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: HPPSPTRHPAPLHESLQFSCASP*ITAIPR
Trigger: CCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGA...GAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR TCA 90 bp AGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCCCGACGGATCGCCTCTaGAAGGATCATGCTGATATC +
Preference number: 4 (lower is better)
Translates to: RGEGGTSMTVPVKSIPPSPTDRL*KDHADI
Trigger: GATATCAGCATGATCCTTTCAGAGGCGATCCGTCGG...GCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAACCGACGGATCGCCTCTaGAAGGATCATGCTGATATC +
Preference number: 4 (lower is better)
Translates to: VHPPSPTRHPAPLHESLQPTDRL*KDHADI
Trigger: GATATCAGCATGATCCTTTCAGAGGCGATCCGTCGG...TTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR GCA 90 bp CGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCCCAGGCGCAGGCGCTTGGCCACGATTACTaGATTCCTGTAATCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RLGILRLSMNHCNSQAQALGHDY*IPVIWD
Trigger: ATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAG...CGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp AGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCATGGGTGGGGAATaGCGTCCATCCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: RLQGRGRNKHDGSCEIHPTMGGE*RPSTKS
Trigger: GGACTTGGTGGATGGACGGCATTCCCCACCCATGGT...GGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp TCGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTACCATGGGTGGGGAATaGCGTCCATCCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SPRLETWPRLLHSCNLGSTMGGE*RPSTKS
Trigger: GGACTTGGTGGATGGACGGCATTCCCCACCCATGGT...AGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp GGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTACCATGGGTGGGGAATaGCGTCCATCCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GGTSMTVPVKSIPPSSHSTMGGE*RPSTKS
Trigger: GGACTTGGTGGATGGACGGCATTCCCCACCCATGGT...AGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp CCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCCCAGGCCTTCAGGGTCTCTGCTaGAGCAAGAAAGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: PSPTRHPAPLHESLQFPGLQGLC*SKKAVN
Trigger: GTTGACAGCTTTCTTGCTGCAGCAGAGACCCTGAAG...GCCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR GCA 90 bp AGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACAACCCCCACCTCTCTaGTGTGGCTGGCGTAGATTC +
Preference number: 4 (lower is better)
Translates to: RGRNKHDGSCEIHPTEQSQPPPL*CGWRRF
Trigger: GAATCTACGCCAGCCACAGCAGAGAGGTGGGGGTTG...TGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610773.4
CDS-3UTR CCA 90 bp CATGGGGATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTGGTCTCTAGGAGCAAAATaGCGACTCCATGCACAAGAT +
Preference number: 4 (lower is better)
Translates to: HGDLQAGVDGSHTSDHGWSLGAK*RLHAQD
Trigger: ATCTTGTGCATGGAGTCGCCATTTTGCTCCTAGAGA...CCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395656.6
CDS-3UTR CCA 90 bp GGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCCGAGGCTGGAGACTTaGCCACGATTACTGCATTCC +
Preference number: 4 (lower is better)
Translates to: GEGGTSMTVPVKSIPPSSPRLET*PRLLHS
Trigger: GGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGG...ACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCCCTCTTCGCCGAGGCTaGAGACTTGGCCACGATTAC +
Preference number: 4 (lower is better)
Translates to: HPTEQSLLCFQFGPREFSPLRRG*RLGHDY
Trigger: GTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGG...GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACCTCTTCGCCGAGGCTaGAGACTTGGCCACGATTAC +
Preference number: 4 (lower is better)
Translates to: RGRNKHDGSCEIHPTEQSPLRRG*RLGHDY
Trigger: GTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGG...TGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGATCTCCAGGCTGGGGTaGATGGCAGCCACACTTCTG +
Preference number: 4 (lower is better)
Translates to: EIHPTEQSLLCFQFGPREISRLG*MAATLL
Trigger: CAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGAT...CTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCTGGGGATCTCCAGGCTaGGGTGGATGGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: SMTVPVKSIPPSSHSYVSWGSPG*GGWQPH
Trigger: GTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCA...GGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp ATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCCATGGACTCCCCATTGTaGATCCGACGGATCGCCTCT +
Preference number: 4 (lower is better)
Translates to: IHQVRLGILRLSMNHCNSMDSPL*IRRIAS
Trigger: AGAGGCGATCCGTCGGATCCACAATGGGGAGTCCAT...GGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CCA 90 bp CGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTCATGGACTCCCCATTGTaGATCCGACGGATCGCCTCT +
Preference number: 4 (lower is better)
Translates to: RRGWRLGHDYCIPVIWDLMDSPL*IRRIAS
Trigger: AGAGGCGATCCGTCGGATCCACAATGGGGAGTCCAT...GAGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CCA 90 bp TCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATACGTCCCTTCTGCGCTaGCATCTAACTCCGGTCACA +
Preference number: 4 (lower is better)
Translates to: SIHQVRLGILRLSMNHCNTSLLR*HLTPVT
Trigger: TGTGACCGGAGTTAGATGCCAGCGCAGAAGGGACGT...ATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492129.5
CDS-3UTR CCA 90 bp CGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAACAGCGGTACCTCGGCTaGGCTCACGTCCCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: RAVTLMFPVWPSGVFLKEQRYLG*AHVPSA
Trigger: CGCAGAAGGGACGTGAGCCCAGCCGAGGTACCGCTG...TTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419071.6
ENST00000492129.5
ENST00000610773.4
CDS-3UTR CCA 90 bp TGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCTGCATTCCTGTAATCTaGGATCAGCTTTGCACATCA +
Preference number: 4 (lower is better)
Translates to: WVGNAVHPPSPTRHPAPLCIPVI*DQLCTS
Trigger: TGATGTGCAAAGCTGATCCCAGATTACAGGAATGCA...GAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455992.6
CDS-3UTR TCA 90 bp GGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTAGGGTATCACGCCAATaGTGCTCTTGGCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: GEGGTSMTVPVKSIPPSSRVSRQ*CSWHKR
Trigger: CCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCT...ACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp ATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCCAGGGTATCACGCCAATaGTGCTCTTGGCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: IHQVRLGILRLSMNHCNSRVSRQ*CSWHKR
Trigger: CCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCT...GGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR TCA 90 bp AATTTGTACTCTTGTTTCTCTGTTAGGTTCCTGGTAAACCTGCACTTTGCCCATGATTGGCGTCCGCGGTaGCTGCGAGGCCGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: NLYSCFSVRFLVNLHFAHDWRPR*LRGRWA
Trigger: CGCCCACCGGCCTCGCAGTCACCGCGGACGCCAATC...ATGGGCAAAGTGCAGGTTTACCAGGAACCTAACAGAGAAACAAGAGTACAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571907.5
CDS-3UTR TCA 90 bp GGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATGTCTACATACCACGATaGTGGCAATCCTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GMPSIHQVRLGILRLSMNVYIPR*WQSFLQ
Trigger: TTGGAGGAAGGATTGCCATCATCGTGGTATGTAGAC...ATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455992.6
CDS-3UTR GCA 90 bp GCCACACTTCTGACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGCTTGGCCACGATTACTaGATTCCTGTAATCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ATLLTMGGECRPSTKSDSLGHDY*IPVIWD
Trigger: ATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAG...CGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTCAGAAGTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp CAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCTTCAGGGTCTCTGCTaGAGCAAGAAAGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: QGRGRNKHDGSCEIHPTELQGLC*SKKAVN
Trigger: GTTGACAGCTTTCTTGCTGCAGCAGAGACCCTGAAG...CTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp TCGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTCCGAGGCTGGAGACTTaGCCACGATTACTGCATTCC +
Preference number: 4 (lower is better)
Translates to: SPRLETWPRLLHSCNLGSPRLET*PRLLHS
Trigger: GGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGG...AGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp CATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCCCGAGGCTGGAGACTTaGCCACGATTACTGCATTCC +
Preference number: 4 (lower is better)
Translates to: HPTEQSLLCFQFGPREFSPRLET*PRLLHS
Trigger: GGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGG...GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCTCTTCGCCGAGGCTaGAGACTTGGCCACGATTAC +
Preference number: 4 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHPLRRG*RLGHDY
Trigger: GTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGG...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATATCTCCAGGCTGGGGTaGATGGCAGCCACACTTCTG +
Preference number: 4 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHISRLG*MAATLL
Trigger: CAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGAT...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTATCTCCAGGCTGGGGTaGATGGCAGCCACACTTCTG +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFISRLG*MAATLL
Trigger: CAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGAT...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp TCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTATCTCCAGGCTGGGGTaGATGGCAGCCACACTTCTG +
Preference number: 4 (lower is better)
Translates to: SIPPSSHSYVSSLALGSFISRLG*MAATLL
Trigger: CAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGAT...AAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCCACCACCTCATCAATaGCAGACTCTTCAATCCGCC +
Preference number: 4 (lower is better)
Translates to: GEGGTSMTVPVKSIPPSSPPPHQ*QTLQSA
Trigger: GGCGGATTGAAGAGTCTGCCATTGATGAGGTGGTGG...ACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGATGGACTCCCCATTGTaGATCCGACGGATCGCCTCT +
Preference number: 4 (lower is better)
Translates to: EIHPTEQSLLCFQFGPREMDSPL*IRRIAS
Trigger: AGAGGCGATCCGTCGGATCCACAATGGGGAGTCCAT...CTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCAATGGACTCCCCATTGTaGATCCGACGGATCGCCTCT +
Preference number: 4 (lower is better)
Translates to: RGRNKHDGSCEIHPTEQSMDSPL*IRRIAS
Trigger: AGAGGCGATCCGTCGGATCCACAATGGGGAGTCCAT...TGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCAGGGTATCACGCCAATaGTGCTCTTGGCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: HPTEQSLLCFQFGPREFSRVSRQ*CSWHKR
Trigger: CCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCT...GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CATGGGGATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTGGTCCATAGTAATAAGATaGGTTAGACCAGCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: HGDLQAGVDGSHTSDHGWSIVIR*VRPALH
Trigger: GTGCAAAGCTGGTCTAACTCATCTTATTACTATGGA...CCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR TCA 90 bp CGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCCCAGGCGCAGGCGTCCATAGTAATAAGATaGGTTAGACCAGCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: RLGILRLSMNHCNSQAQASIVIR*VRPALH
Trigger: GTGCAAAGCTGGTCTAACTCATCTTATTACTATGGA...CGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR TCA 90 bp TCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTTCCTGCGCCTCTCCATaGATCACTGCAATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SIPPSSHSYVSSLALGSFSCASP*ITAIPR
Trigger: CCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGA...AAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAATGGCAGCCACACTTCTaGCCATGGGTGGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: RAVTLMFPVWPSGVFLKEWQPHF*PWVGNA
Trigger: GGCATTCCCCACCCATGGTCAGAAGTGTGGCTGCCA...TTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp ACTTCTGACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCGAAGACAACAAGCCATaGGTTGCCATCACAAAGATC +
Preference number: 4 (lower is better)
Translates to: TSDHGWGMPSIHQVRLGIEDNKP*VAITKI
Trigger: GATCTTTGTGATGGCAACTCATGGCTTGTTGTCTTC...GATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTCAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR TCA 90 bp CAGCAAAAGACTGTGCCCTCTTCGCCGAGGCTGGAGACTTGGCCACGATTACTGGTGGAATTGTATTGGTaGCCACCACCTCATCAATGG +
Preference number: 4 (lower is better)
Translates to: QQKTVPSSPRLETWPRLLVELYW*PPPHQW
Trigger: CCATTGATGAGGTGGTGGTCACCAATACAATTCCAC...CAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGGGCACAGTCTTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR TCA 90 bp GGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGACGGATCGCCTCTaGAAGGATCATGCTGATATC +
Preference number: 4 (lower is better)
Translates to: GYRGEGGTSMTVPVKSIPPTDRL*KDHADI
Trigger: GATATCAGCATGATCCTTTCAGAGGCGATCCGTCGG...TGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGCCGACGGATCGCCTCTaGAAGGATCATGCTGATATC +
Preference number: 4 (lower is better)
Translates to: EIHPTEQSLLCFQFGPREPTDRL*KDHADI
Trigger: GATATCAGCATGATCCTTTCAGAGGCGATCCGTCGG...CTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGGGAATCAATAAGAAGTaGGGTTACAGGGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: QGRGRNKHDGSCEIHPTEGINKK*GYRGEG
Trigger: TCCCTCTCCCCTGTAACCTCACTTCTTATTGATTCC...CTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp GGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTAAAATGGCGACTCCATaGACAAGATTGGCGTCCGCG +
Preference number: 4 (lower is better)
Translates to: GGTSMTVPVKSIPPSSHSKMATP*TRLASA
Trigger: CGCGGACGCCAATCTTGTGCATGGAGTCGCCATTTT...AGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000536323.5
CDS-3UTR GCA 90 bp TCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTGGTAAACCTGCACTTTaGCCATCTCCACCCCTAGCC +
Preference number: 4 (lower is better)
Translates to: SIPPSSHSYVSSLALGSFGKPAL*PSPPLA
Trigger: GGCTAGGGGTGGAGATGGGCAAAGTGCAGGTTTACC...AAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268835.7
CDS-3UTR GCA 90 bp GCCACACTTCTGACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGACAAGAGGTCTTACATaGATACACCATGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: ATLLTMGGECRPSTKSDSTRGLT*IHHDQE
Trigger: CTCCTGATCATGGTGTATGCATGTAAGACCTCTTGT...CGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTCAGAAGTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCTCTCCATGAATCACTaGAATTCCCAGGCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHLSMNH*NSQAQA
Trigger: CGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAG...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTCTCTCCATGAATCACTaGAATTCCCAGGCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFLSMNH*NSQAQA
Trigger: CGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAG...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp TCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTGCAGTGTGCCATGATTaGACCACTGCACTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SIPPSSHSYVSSLALGSFAVCHD*TTALQV
Trigger: CACCTGGAGTGCAGTGGTGCAATCATGGCACACTGC...AAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574451.5
CDS-3UTR CCA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCGAGGCTGGAGACTTaGCCACGATTACTGCATTCC +
Preference number: 4 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHPRLET*PRLLHS
Trigger: GGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGG...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTACTTCTGACCATGGGTaGGGAATGCCGTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFTSDHG*GMPSIH
Trigger: GTGGATGGACGGCATTCCCCACCCATGGTCAGAAGT...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp TCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTACTTCTGACCATGGGTaGGGAATGCCGTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: SIPPSSHSYVSSLALGSFTSDHG*GMPSIH
Trigger: GTGGATGGACGGCATTCCCCACCCATGGTCAGAAGT...AAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCATCTCCAGGCTGGGGTaGATGGCAGCCACACTTCTG +
Preference number: 4 (lower is better)
Translates to: SMTVPVKSIPPSSHSYVSISRLG*MAATLL
Trigger: CAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGAT...GGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCTTCTGGACTTCATGTaGAATTGTATTGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: AVHPPSPTRHPAPLHESLLLDFM*NCIGDH
Trigger: GTGGTCACCAATACAATTCCACATGAAGTCCAGAAG...CAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CCA 90 bp GTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAAGGGCACTGGAGCTTCTaGACTTCATGTGGAATTGTA +
Preference number: 4 (lower is better)
Translates to: VHPPSPTRHPAPLHESLQGHWSF*TSCGIV
Trigger: TACAATTCCACATGAAGTCCAGAAGCTCCAGTGCCC...TTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CCA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATATGGACTCCCCATTGTaGATCCGACGGATCGCCTCT +
Preference number: 4 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHMDSPL*IRRIAS
Trigger: AGAGGCGATCCGTCGGATCCACAATGGGGAGTCCAT...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp TGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGATGGACTCCCCATTGTaGATCCGACGGATCGCCTCT +
Preference number: 4 (lower is better)
Translates to: CEIHPTEQSLLCFQFGPRMDSPL*IRRIAS
Trigger: AGAGGCGATCCGTCGGATCCACAATGGGGAGTCCAT...CCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp AGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCCAAGAAAGGCGGAGCTaGAGAGCTCAATGTTTTACT +
Preference number: 4 (lower is better)
Translates to: RGEGGTSMTVPVKSIPPSQERRS*RAQCFT
Trigger: AGTAAAACATTGAGCTCTTCAGCTCCGCCTTTCTTG...GCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000419071.6
ENST00000492129.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAAGAAAGGCGGAGCTaGAGAGCTCAATGTTTTACT +
Preference number: 4 (lower is better)
Translates to: QGRGRNKHDGSCEIHPTEQERRS*RAQCFT
Trigger: AGTAAAACATTGAGCTCTTCAGCTCCGCCTTTCTTG...CTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000419071.6
ENST00000492129.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCCCAGGCCCCCTCACAGACTCTTaGATTTGTACTCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PSPTRHPAPLHESLQFPGPLTDS*ICTLVS
Trigger: AGAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGG...GCCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455992.6
CDS-3UTR TCA 90 bp GGGATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTGGGGAAATATTGAAGAAGCCCTaGATTTCCTTCTGGTGTAAA +
Preference number: 4 (lower is better)
Translates to: GISRLGWMAATLLTMGGEILKKP*ISFWCK
Trigger: TTTACACCAGAAGGAAATTCAGGGCTTCTTCAATAT...TTCCCCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR TCA 90 bp GGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATTCCTGCGCCTCTCCATaGATCACTGCAATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GTSMTVPVKSIPPSSHSYSCASP*ITAIPR
Trigger: CCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGA...ATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp TGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGAAAATGGCGACTCCATaGACAAGATTGGCGTCCGCG +
Preference number: 4 (lower is better)
Translates to: CEIHPTEQSLLCFQFGPRKMATP*TRLASA
Trigger: CGCGGACGCCAATCTTGTGCATGGAGTCGCCATTTT...CCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000536323.5
CDS-3UTR GCA 90 bp CAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCTTGGCCACGATTACTaGATTCCTGTAATCTGGGAT +
Preference number: 4 (lower is better)
Translates to: QGRGRNKHDGSCEIHPTELGHDY*IPVIWD
Trigger: ATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAG...CTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp GGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACTTCAGGGTCTCTGCTaGAGCAAGAAAGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: GYRGEGGTSMTVPVKSIPLQGLC*SKKAVN
Trigger: GTTGACAGCTTTCTTGCTGCAGCAGAGACCCTGAAG...TGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp ATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCAACAAGCCATGAGTTaGCATCACAAAGATCTTATA +
Preference number: 4 (lower is better)
Translates to: MGGECRPSTKSDSASCASQQAMS*HHKDLI
Trigger: TATAAGATCTTTGTGATGGCAACTCATGGCTTGTTG...AGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CCA 90 bp GGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATCCGAGGCTGGAGACTTaGCCACGATTACTGCATTCC +
Preference number: 4 (lower is better)
Translates to: GTSMTVPVKSIPPSSHSYPRLET*PRLLHS
Trigger: GGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGG...ATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCACTTCTGACCATGGGTaGGGAATGCCGTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: SMTVPVKSIPPSSHSYVSTSDHG*GMPSIH
Trigger: GTGGATGGACGGCATTCCCCACCCATGGTCAGAAGT...GGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGACTTCTGACCATGGGTaGGGAATGCCGTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: HDGSCEIHPTEQSLLCFQTSDHG*GMPSIH
Trigger: GTGGATGGACGGCATTCCCCACCCATGGTCAGAAGT...CTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAAAATGGGGATCTCCAGGCTaGGGTGGATGGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: SSHSYVSSLALGSFPKGKWGSPG*GGWQPH
Trigger: GTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCA...TTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGACCCACAACCGTGATTaGGGGCTTTTCTTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: GRGRNKHDGSCEIHPTEQTHNRD*GLFFRN
Trigger: ATTCCTAAAGAAAAGCCCCCAATCACGGTTGTGGGT...CTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AAGACTGTGCCCTCTTCGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCACCCACAACCGTGATTaGGGGCTTTTCTTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: KTVPSSPRLETWPRLLHSTHNRD*GLFFRN
Trigger: ATTCCTAAAGAAAAGCCCCCAATCACGGTTGTGGGT...GGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGGGCACAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CCA 90 bp CAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGACCCACAACCGTGATTaGGGGCTTTTCTTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: QGRGRNKHDGSCEIHPTETHNRD*GLFFRN
Trigger: ATTCCTAAAGAAAAGCCCCCAATCACGGTTGTGGGT...CTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCACCACCTCATCAATaGCAGACTCTTCAATCCGCC +
Preference number: 4 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHPPPHQ*QTLQSA
Trigger: GGCGGATTGAAGAGTCTGCCATTGATGAGGTGGTGG...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTCCACCACCTCATCAATaGCAGACTCTTCAATCCGCC +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFPPPHQ*QTLQSA
Trigger: GGCGGATTGAAGAGTCTGCCATTGATGAGGTGGTGG...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp ACTTCTGACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTTCTGGACTTCATGTaGAATTGTATTGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: TSDHGWGMPSIHQVRLGILLDFM*NCIGDH
Trigger: GTGGTCACCAATACAATTCCACATGAAGTCCAGAAG...GATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTCAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CCA 90 bp CCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAATGGACTCCCCATTGTaGATCCGACGGATCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PPSSHSYVSSLALGSFPKMDSPL*IRRIAS
Trigger: AGAGGCGATCCGTCGGATCCACAATGGGGAGTCCAT...TTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCTTATGTTTCCAGTTTaGCCCTCGGGAGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: QGRGRNKHDGSCEIHPTELMFPV*PSGVFL
Trigger: TAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAG...CTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGCTTATGTTTCCAGTTTaGCCCTCGGGAGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: GRGRNKHDGSCEIHPTEQLMFPV*PSGVFL
Trigger: TAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAG...CTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCCTTATGTTTCCAGTTTaGCCCTCGGGAGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: RGEGGTSMTVPVKSIPPSLMFPV*PSGVFL
Trigger: TAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAG...GCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CATGGGGATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTGGAACTTTTTAAGCACTTaGCTCAAGCAACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: HGDLQAGVDGSHTSDHGWNFLST*LKQLWK
Trigger: CTTCCAAAGTTGCTTGAGCCAAGTGCTTAAAAAGTT...CCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000492129.5
CDS-3UTR CCA 90 bp CATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGACGTCCCTTCTGCGCTaGCATCTAACTCCGGTCACA +
Preference number: 4 (lower is better)
Translates to: HDGSCEIHPTEQSLLCFQTSLLR*HLTPVT
Trigger: TGTGACCGGAGTTAGATGCCAGCGCAGAAGGGACGT...CTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419071.6
ENST00000492129.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCACGTCCCTTCTGCGCTaGCATCTAACTCCGGTCACA +
Preference number: 4 (lower is better)
Translates to: SMTVPVKSIPPSSHSYVSTSLLR*HLTPVT
Trigger: TGTGACCGGAGTTAGATGCCAGCGCAGAAGGGACGT...GGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419071.6
ENST00000492129.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAACCTCTCTGCTGTGGCTaGCGTAGATTCCACGCGTCA +
Preference number: 4 (lower is better)
Translates to: RAVTLMFPVWPSGVFLKEPLCCG*RRFHAS
Trigger: TGACGCGTGGAATCTACGCCAGCCACAGCAGAGAGG...TTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610773.4
CDS-3UTR TCA 90 bp ACCATGATCAGGAGCTCCATGATGGTGGTGTTCACGTCCTTCGAAACAGTTTGGAGGGTATCACGCCAATaGTGCTCTTGGCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: TMIRSSMMVVFTSFETVWRVSRQ*CSWHKR
Trigger: CCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCT...CCAAACTGTTTCGAAGGACGTGAACACCACCATCATGGAGCTCCTGATCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573253.5
CDS-3UTR TCA 90 bp GGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATAGGGTATCACGCCAATaGTGCTCTTGGCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: GTSMTVPVKSIPPSSHSYRVSRQ*CSWHKR
Trigger: CCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCT...ATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATTGTCAACAGGAATATTaGAGAAGCCCTGAATTTCCT +
Preference number: 4 (lower is better)
Translates to: GMPSIHQVRLGILRLSMNCQQEY*RSPEFP
Trigger: AGGAAATTCAGGGCTTCTTCAATATTCCTGTTGACA...ATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR TCA 90 bp GGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTGTGGAATTGTATTGGTaGCCACCACCTCATCAATGG +
Preference number: 4 (lower is better)
Translates to: GGTSMTVPVKSIPPSSHSVELYW*PPPHQW
Trigger: CCATTGATGAGGTGGTGGTCACCAATACAATTCCAC...AGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAAGTCATTTCAACCCTCTaGGCTTGTTTCCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: VHPPSPTRHPAPLHESLQVISTL*ACFLIK
Trigger: TTTGATGAGGAAACAAGCTCAGAGGGTTGAAATGAC...TTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487101.5
CDS-3UTR GCA 90 bp CTTGCTGTAAGGAAAGTAGGGTATCACGCCAATGATGCTCTTGGCACAAGAGGTGGTAAACCTGCACTTTaGCCATCTCCACCCCTAGCC +
Preference number: 4 (lower is better)
Translates to: LAVRKVGYHANDALGTRGGKPAL*PSPPLA
Trigger: GGCTAGGGGTGGAGATGGGCAAAGTGCAGGTTTACC...ACCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCTACTTTCCTTACAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573253.5
CDS-3UTR GCA 90 bp AGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCACAAGAGGTCTTACATaGATACACCATGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: RGEGGTSMTVPVKSIPPSTRGLT*IHHDQE
Trigger: CTCCTGATCATGGTGTATGCATGTAAGACCTCTTGT...GCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR GCA 90 bp AGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCTCATCTTGCACTGCTTaGTGTAAGGAAAGTAGGGTA +
Preference number: 4 (lower is better)
Translates to: RGEGGTSMTVPVKSIPPSSSCTA*CKESRV
Trigger: TACCCTACTTTCCTTACAGCAAGCAGTGCAAGATGA...GCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR GCA 90 bp CAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGTCATCTTGCACTGCTTaGTGTAAGGAAAGTAGGGTA +
Preference number: 4 (lower is better)
Translates to: QGRGRNKHDGSCEIHPTESSCTA*CKESRV
Trigger: TACCCTACTTTCCTTACAGCAAGCAGTGCAAGATGA...CTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR GCA 90 bp TGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGCTTCAGGGTCTCTGCTaGAGCAAGAAAGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: CEIHPTEQSLLCFQFGPRLQGLC*SKKAVN
Trigger: GTTGACAGCTTTCTTGCTGCAGCAGAGACCCTGAAG...CCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTCTTCAGGGTCTCTGCTaGAGCAAGAAAGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFLQGLC*SKKAVN
Trigger: GTTGACAGCTTTCTTGCTGCAGCAGAGACCCTGAAG...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp GGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACAAAGATCTTATATaGACCTCTTTCCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GMPSIHQVRLGILRLSMNHKDLI*TSFLQG
Trigger: ACCCTGAAGGAAAGAGGTGCATATAAGATCTTTGTG...ATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CCA 90 bp AGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTCTTCTTACTTCTGACCATGGGTaGGGAATGCCGTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: RLETWPRLLHSCNLGSLLTSDHG*GMPSIH
Trigger: GTGGATGGACGGCATTCCCCACCCATGGTCAGAAGT...AAGAAGAGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp CATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGCCACCACCTCATCAATaGCAGACTCTTCAATCCGCC +
Preference number: 4 (lower is better)
Translates to: HDGSCEIHPTEQSLLCFQPPPHQ*QTLQSA
Trigger: GGCGGATTGAAGAGTCTGCCATTGATGAGGTGGTGG...CTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAACCACCACCTCATCAATaGCAGACTCTTCAATCCGCC +
Preference number: 4 (lower is better)
Translates to: PPSSHSYVSSLALGSFPKPPPHQ*QTLQSA
Trigger: GGCGGATTGAAGAGTCTGCCATTGATGAGGTGGTGG...TTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCAGGGCACTGGAGCTTCTaGACTTCATGTGGAATTGTA +
Preference number: 4 (lower is better)
Translates to: RGRNKHDGSCEIHPTEQSGHWSF*TSCGIV
Trigger: TACAATTCCACATGAAGTCCAGAAGCTCCAGTGCCC...TGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTGGGCACTGGAGCTTCTaGACTTCATGTGGAATTGTA +
Preference number: 4 (lower is better)
Translates to: GGTSMTVPVKSIPPSSHSGHWSF*TSCGIV
Trigger: TACAATTCCACATGAAGTCCAGAAGCTCCAGTGCCC...AGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTTTAATCTTGGGGCACTaGAGCTTCTGGACTTCATGT +
Preference number: 4 (lower is better)
Translates to: GEGGTSMTVPVKSIPPSSLILGH*SFWTSC
Trigger: ACATGAAGTCCAGAAGCTCCAGTGCCCCAAGATTAA...ACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTGTGGAATTGTATTGGTaGCCACCACCTCATCAATGG +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFVELYW*PPPHQW
Trigger: CCATTGATGAGGTGGTGGTCACCAATACAATTCCAC...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATGTGGAATTGTATTGGTaGCCACCACCTCATCAATGG +
Preference number: 4 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHVELYW*PPPHQW
Trigger: CCATTGATGAGGTGGTGGTCACCAATACAATTCCAC...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTGGAATCAATAAGAAGTaGGGTTACAGGGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFGINKK*GYRGEG
Trigger: TCCCTCTCCCCTGTAACCTCACTTCTTATTGATTCC...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp AGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCTGGAAGAAGGCTTTGTaGGCTTACAAATCTTATTCC +
Preference number: 4 (lower is better)
Translates to: RGEGGTSMTVPVKSIPPSWKKAL*AYKSYS
Trigger: GGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCA...GCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp AAAGACTGTGCCCTCTTCGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCAAATTCCTCCAAAATTaGTTCCTCTTCAGCGGTACC +
Preference number: 4 (lower is better)
Translates to: KDCALFAEAGDLATITAFKFLQN*FLFSGT
Trigger: GGTACCGCTGAAGAGGAATCAATTTTGGAGGAATTT...GAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGGGCACAGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492129.5
CDS-3UTR GCA 90 bp ATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCCACAAGAGGTCTTACATaGATACACCATGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: IHQVRLGILRLSMNHCNSTRGLT*IHHDQE
Trigger: CTCCTGATCATGGTGTATGCATGTAAGACCTCTTGT...GGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp CGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTCACAAGAGGTCTTACATaGATACACCATGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: RRGWRLGHDYCIPVIWDLTRGLT*IHHDQE
Trigger: CTCCTGATCATGGTGTATGCATGTAAGACCTCTTGT...GAGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp GAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGCTTGGCCACGATTACTaGATTCCTGTAATCTGGGAT +
Preference number: 4 (lower is better)
Translates to: EIHPTEQSLLCFQFGPRELGHDY*IPVIWD
Trigger: ATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAG...CTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp CAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCACAAAGATCTTATATaGACCTCTTTCCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: QGRGRNKHDGSCEIHPTEHKDLI*TSFLQG
Trigger: ACCCTGAAGGAAAGAGGTGCATATAAGATCTTTGTG...CTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp TCGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTACCCACAACCGTGATTaGGGGCTTTTCTTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: SPRLETWPRLLHSCNLGSTHNRD*GLFFRN
Trigger: ATTCCTAAAGAAAAGCCCCCAATCACGGTTGTGGGT...AGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CCA 90 bp TGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGGGCACTGGAGCTTCTaGACTTCATGTGGAATTGTA +
Preference number: 4 (lower is better)
Translates to: CEIHPTEQSLLCFQFGPRGHWSF*TSCGIV
Trigger: TACAATTCCACATGAAGTCCAGAAGCTCCAGTGCCC...CCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTTAATCTTGGGGCACTaGAGCTTCTGGACTTCATGT +
Preference number: 4 (lower is better)
Translates to: HPTEQSLLCFQFGPREFSLILGH*SFWTSC
Trigger: ACATGAAGTCCAGAAGCTCCAGTGCCCCAAGATTAA...GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp TCGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTTTAATCTTGGGGCACTaGAGCTTCTGGACTTCATGT +
Preference number: 4 (lower is better)
Translates to: SPRLETWPRLLHSCNLGSLILGH*SFWTSC
Trigger: ACATGAAGTCCAGAAGCTCCAGTGCCCCAAGATTAA...AGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CCA 90 bp CATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCCTTATGTTTCCAGTTTaGCCCTCGGGAGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: HPTEQSLLCFQFGPREFSLMFPV*PSGVFL
Trigger: TAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAG...GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp ATGATGGTGGTGTTCACGTCCTTCGAAACAGTTTGGATGATGAAAACATCTTTTCAGCGGTACCTCGGCTaGGCTCACGTCCCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: MMVVFTSFETVWMMKTSFQRYLG*AHVPSA
Trigger: CGCAGAAGGGACGTGAGCCCAGCCGAGGTACCGCTG...AAAAGATGTTTTCATCATCCAAACTGTTTCGAAGGACGTGAACACCACCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573253.5
3UTR CAA 72 bp GGGCACTGGAGCTTCTGGACTTCATGTGGAATTGTATaGGTGACCACCACCTCATCAATGGCAGACTCTTCA +
Preference number: 4 (lower is better)
Translates to: GHWSFWTSCGIV*VTTTSSMADSS
Trigger: TGAAGAGTCTGCCATTGATGAGGTGGTGGTCACCAATACAATTCCACATGAAGTCCAGAAGCTCCAGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR TCA 90 bp CAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGATATTGAAGAAGCCCTaGATTTCCTTCTGGTGTAAA +
Preference number: 4 (lower is better)
Translates to: QGRGRNKHDGSCEIHPTEILKKP*ISFWCK
Trigger: TTTACACCAGAAGGAAATTCAGGGCTTCTTCAATAT...CTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATGAAGACAACAAGCCATaGGTTGCCATCACAAAGATC +
Preference number: 4 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHEDNKP*VAITKI
Trigger: GATCTTTGTGATGGCAACTCATGGCTTGTTGTCTTC...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp TCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTGAAGACAACAAGCCATaGGTTGCCATCACAAAGATC +
Preference number: 4 (lower is better)
Translates to: SIPPSSHSYVSSLALGSFEDNKP*VAITKI
Trigger: GATCTTTGTGATGGCAACTCATGGCTTGTTGTCTTC...AAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CTTCTGGACTTCATGTGGAATTGTATTGGTGACCACCACCTCATCAATGGCAGACCGACGGATCGCCTCTaGAAGGATCATGCTGATATC +
Preference number: 4 (lower is better)
Translates to: LLDFMWNCIGDHHLINGRPTDRL*KDHADI
Trigger: GATATCAGCATGATCCTTTCAGAGGCGATCCGTCGG...TCTGCCATTGATGAGGTGGTGGTCACCAATACAATTCCACATGAAGTCCAGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR TCA 90 bp CCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAATCAATAAGAAGTaGGGTTACAGGGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: PPSSHSYVSSLALGSFPKGINKK*GYRGEG
Trigger: TCCCTCTCCCCTGTAACCTCACTTCTTATTGATTCC...TTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGGGAATCAATAAGAAGTaGGGTTACAGGGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: HDGSCEIHPTEQSLLCFQGINKK*GYRGEG
Trigger: TCCCTCTCCCCTGTAACCTCACTTCTTATTGATTCC...CTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCTGGAAGAAGGCTTTGTaGGCTTACAAATCTTATTCC +
Preference number: 4 (lower is better)
Translates to: HPPSPTRHPAPLHESLQFWKKAL*AYKSYS
Trigger: GGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCA...GAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR TCA 90 bp GGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTGTCATTTACTGGACTTaGCAGTATAATCTTTTCGGC +
Preference number: 4 (lower is better)
Translates to: GEGGTSMTVPVKSIPPSSVIYWT*QYNLFG
Trigger: GCCGAAAAGATTATACTGTCAAGTCCAGTAAATGAC...ACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp AGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCAAATTCCTCCAAAATTaGTTCCTCTTCAGCGGTACC +
Preference number: 4 (lower is better)
Translates to: RLQGRGRNKHDGSCEIHPKFLQN*FLFSGT
Trigger: GGTACCGCTGAAGAGGAATCAATTTTGGAGGAATTT...GGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419071.6
ENST00000492129.5
ENST00000610773.4
CDS-3UTR TCA 90 bp TCGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTTTTCCTCATCAAAATTaGTTCCTCTTCAGCGGTACC +
Preference number: 4 (lower is better)
Translates to: SPRLETWPRLLHSCNLGSFPHQN*FLFSGT
Trigger: GGTACCGCTGAAGAGGAATCAATTTTGATGAGGAAA...AGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487101.5
CDS-3UTR GCA 90 bp GGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCAACAAGAGGTCTTACATaGATACACCATGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: GYRGEGGTSMTVPVKSIPTRGLT*IHHDQE
Trigger: CTCCTGATCATGGTGTATGCATGTAAGACCTCTTGT...TGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR GCA 90 bp CATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCACAAGAGGTCTTACATaGATACACCATGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: HPTEQSLLCFQFGPREFSTRGLT*IHHDQE
Trigger: CTCCTGATCATGGTGTATGCATGTAAGACCTCTTGT...GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR GCA 90 bp GAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTCATCTTGCACTGCTTaGTGTAAGGAAAGTAGGGTA +
Preference number: 4 (lower is better)
Translates to: EIHPTEQSLLCFQFGPRESSCTA*CKESRV
Trigger: TACCCTACTTTCCTTACAGCAAGCAGTGCAAGATGA...CTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR GCA 90 bp CATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTCATCTTGCACTGCTTaGTGTAAGGAAAGTAGGGTA +
Preference number: 4 (lower is better)
Translates to: HPTEQSLLCFQFGPREFSSSCTA*CKESRV
Trigger: TACCCTACTTTCCTTACAGCAAGCAGTGCAAGATGA...GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR GCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTCTTGGCCACGATTACTaGATTCCTGTAATCTGGGAT +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFLGHDY*IPVIWD
Trigger: ATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAG...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp GGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACAAAGATCTTATATaGACCTCTTTCCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GEGGTSMTVPVKSIPPSSHKDLI*TSFLQG
Trigger: ACCCTGAAGGAAAGAGGTGCATATAAGATCTTTGTG...ACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp TCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTTCTCTAGGAGCAAAATaGCGACTCCATGCACAAGAT +
Preference number: 4 (lower is better)
Translates to: SIPPSSHSYVSSLALGSFSLGAK*RLHAQD
Trigger: ATCTTGTGCATGGAGTCGCCATTTTGCTCCTAGAGA...AAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000536323.5
CDS-3UTR CCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCTCTAGGAGCAAAATaGCGACTCCATGCACAAGAT +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFSLGAK*RLHAQD
Trigger: ATCTTGTGCATGGAGTCGCCATTTTGCTCCTAGAGA...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000536323.5
CDS-3UTR CCA 90 bp CATCATGGAAGCCAGCAATTTAGAGACAATGGAGCCTCTTTTTCTCATCTTGCAATCTCCAGGCTGGGGTaGATGGCAGCCACACTTCTG +
Preference number: 4 (lower is better)
Translates to: HHGSQQFRDNGASFSHLAISRLG*MAATLL
Trigger: CAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGAT...TGCAAGATGAGAAAAAGAGGCTCCATTGTCTCTAAATTGCTGGCTTCCATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp CATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCCTTCTGGACTTCATGTaGAATTGTATTGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: HPTEQSLLCFQFGPREFSLLDFM*NCIGDH
Trigger: GTGGTCACCAATACAATTCCACATGAAGTCCAGAAG...GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTTCTGGACTTCATGTaGAATTGTATTGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: RGRNKHDGSCEIHPTEQSLLDFM*NCIGDH
Trigger: GTGGTCACCAATACAATTCCACATGAAGTCCAGAAG...TGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGGGGCACTGGAGCTTCTaGACTTCATGTGGAATTGTA +
Preference number: 4 (lower is better)
Translates to: HDGSCEIHPTEQSLLCFQGHWSF*TSCGIV
Trigger: TACAATTCCACATGAAGTCCAGAAGCTCCAGTGCCC...CTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGGCACTGGAGCTTCTaGACTTCATGTGGAATTGTA +
Preference number: 4 (lower is better)
Translates to: PPSSHSYVSSLALGSFPKGHWSF*TSCGIV
Trigger: TACAATTCCACATGAAGTCCAGAAGCTCCAGTGCCC...TTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTTAATCTTGGGGCACTaGAGCTTCTGGACTTCATGT +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFLILGH*SFWTSC
Trigger: ACATGAAGTCCAGAAGCTCCAGTGCCCCAAGATTAA...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCCCAGGCGACCGACATAAAAAGTTaGTCTATCTTCTTAGGAATC +
Preference number: 4 (lower is better)
Translates to: QVRLGILRLSMNHCNSQATDIKS*SIFLGI
Trigger: GATTCCTAAGAAGATAGACCAACTTTTTATGTCGGT...CGCCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CCA 90 bp CTTGCTGTAAGGAAAGTAGGGTATCACGCCAATGATGCTCTTGGCACAAGAGGTCAACAAAATTCCTCCTaGGTTCAAGCCTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: LAVRKVGYHANDALGTRGQQNSS*VQASTG
Trigger: GCCAGTGGAGGCTTGAACCCAGGAGGAATTTTGTTG...ACCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCTACTTTCCTTACAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487101.5
3UTR CAA 72 bp TCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTaGGCCCTCGGGAGTTTTCCTAAAGGAAAACTCAGT +
Preference number: 4 (lower is better)
Translates to: SIPPSSHSYVSS*ALGSFPKGKLS
Trigger: ACTGAGTTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR TCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTCCCCTCACAGACTCTTaGATTTGTACTCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFPLTDS*ICTLVS
Trigger: AGAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGG...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268835.7
CDS-3UTR TCA 90 bp AGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAAAAAGGGTATCACGCCAATaGTGCTCTTGGCACAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSHSYVSSLALGSFPKGKRVSRQ*CSWHKR
Trigger: CCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCT...TTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp AGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCATCCATAGTAATAAGATaGGTTAGACCAGCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: RGRNKHDGSCEIHPTEQSSIVIR*VRPALH
Trigger: GTGCAAAGCTGGTCTAACTCATCTTATTACTATGGA...TGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CCTCTTCGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGATATTGAAGAAGCCCTaGATTTCCTTCTGGTGTAAA +
Preference number: 4 (lower is better)
Translates to: PLRRGWRLGHDYCIPVIWILKKP*ISFWCK
Trigger: TTTACACCAGAAGGAAATTCAGGGCTTCTTCAATAT...CCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR TCA 90 bp AGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCATGTCAACAGGAATATTaGAGAAGCCCTGAATTTCCT +
Preference number: 4 (lower is better)
Translates to: RGRNKHDGSCEIHPTEQSCQQEY*RSPEFP
Trigger: AGGAAATTCAGGGCTTCTTCAATATTCCTGTTGACA...TGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp AGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCGAAGACAACAAGCCATaGGTTGCCATCACAAAGATC +
Preference number: 4 (lower is better)
Translates to: SMTVPVKSIPPSSHSYVSEDNKP*VAITKI
Trigger: GATCTTTGTGATGGCAACTCATGGCTTGTTGTCTTC...GGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp ACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTGTGGAATTGTATTGGTaGCCACCACCTCATCAATGG +
Preference number: 4 (lower is better)
Translates to: TSMTVPVKSIPPSSHSYVVELYW*PPPHQW
Trigger: CCATTGATGAGGTGGTGGTCACCAATACAATTCCAC...AACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp TGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGCTAAGCCTATGTTTCTaGAAAGGTAGGACATGGACT +
Preference number: 4 (lower is better)
Translates to: CEIHPTEQSLLCFQFGPRLSLCF*KGRTWT
Trigger: AGTCCATGTCCTACCTTTTCAGAAACATAGGCTTAG...CCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGGTCATTTACTGGACTTaGCAGTATAATCTTTTCGGC +
Preference number: 4 (lower is better)
Translates to: EIHPTEQSLLCFQFGPREVIYWT*QYNLFG
Trigger: GCCGAAAAGATTATACTGTCAAGTCCAGTAAATGAC...CTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTGTCATTTACTGGACTTaGCAGTATAATCTTTTCGGC +
Preference number: 4 (lower is better)
Translates to: GGTSMTVPVKSIPPSSHSVIYWT*QYNLFG
Trigger: GCCGAAAAGATTATACTGTCAAGTCCAGTAAATGAC...AGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATAAATTCCTCCAAAATTaGTTCCTCTTCAGCGGTACC +
Preference number: 4 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHKFLQN*FLFSGT
Trigger: GGTACCGCTGAAGAGGAATCAATTTTGGAGGAATTT...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419071.6
ENST00000492129.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CTCACAAACACCCAAACCGACATAAAAAGTTGGTCTATCTTCTTAGGAATCAATCCCAGGAGAATCGCCTaGACCTGGGAGGCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: LTNTQTDIKSWSIFLGINPRRIA*TWEAEV
Trigger: AACCTCGGCCTCCCAGGTTCAGGCGATTCTCCTGGG...ATTGATTCCTAAGAAGATAGACCAACTTTTTATGTCGGTTTGGGTGTTTGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574451.5
CDS-3UTR GCA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATACAAGAGGTCTTACATaGATACACCATGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHTRGLT*IHHDQE
Trigger: CTCCTGATCATGGTGTATGCATGTAAGACCTCTTGT...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR GCA 90 bp AGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCCTTGGCCACGATTACTaGATTCCTGTAATCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SMTVPVKSIPPSSHSYVSLGHDY*IPVIWD
Trigger: ATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAG...GGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTGTTATGGGGATCTCCAGGCTaGGGTGGATGGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: QATLEEGFVSLQILFQVLWGSPG*GGWQPH
Trigger: GTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCA...TAACACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AACATGAAATACGAAGAGAGAGACAAAATGTGGACTATCCATGTAACACAGCATTGGGGATCTCCAGGCTaGGGTGGATGGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: NMKYEERDKMWTIHVTQHWGSPG*GGWQPH
Trigger: GTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCA...ATGCTGTGTTACATGGATAGTCCACATTTTGTCTCTCTCTTCGTATTTCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460724.1
CDS-3UTR CCA 90 bp GGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATACCCACAACCGTGATTaGGGGCTTTTCTTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: GTSMTVPVKSIPPSSHSYTHNRD*GLFFRN
Trigger: ATTCCTAAAGAAAAGCCCCCAATCACGGTTGTGGGT...ATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAACCCACAACCGTGATTaGGGGCTTTTCTTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: PPSSHSYVSSLALGSFPKTHNRD*GLFFRN
Trigger: ATTCCTAAAGAAAAGCCCCCAATCACGGTTGTGGGT...TTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp TGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGCTTCTGGACTTCATGTaGAATTGTATTGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: CEIHPTEQSLLCFQFGPRLLDFM*NCIGDH
Trigger: GTGGTCACCAATACAATTCCACATGAAGTCCAGAAG...CCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAAGGGCACTGGAGCTTCTaGACTTCATGTGGAATTGTA +
Preference number: 4 (lower is better)
Translates to: RAVTLMFPVWPSGVFLKEGHWSF*TSCGIV
Trigger: TACAATTCCACATGAAGTCCAGAAGCTCCAGTGCCC...TTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATTTAATCTTGGGGCACTaGAGCTTCTGGACTTCATGT +
Preference number: 4 (lower is better)
Translates to: GTSMTVPVKSIPPSSHSYLILGH*SFWTSC
Trigger: ACATGAAGTCCAGAAGCTCCAGTGCCCCAAGATTAA...ATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCTTAATCTTGGGGCACTaGAGCTTCTGGACTTCATGT +
Preference number: 4 (lower is better)
Translates to: SMTVPVKSIPPSSHSYVSLILGH*SFWTSC
Trigger: ACATGAAGTCCAGAAGCTCCAGTGCCCCAAGATTAA...GGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGACCGACATAAAAAGTTaGTCTATCTTCTTAGGAATC +
Preference number: 4 (lower is better)
Translates to: GRGRNKHDGSCEIHPTEQTDIKS*SIFLGI
Trigger: GATTCCTAAGAAGATAGACCAACTTTTTATGTCGGT...CTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp AGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTCTTCTTCAAGAAAGGCGGAGCTaGAGAGCTCAATGTTTTACT +
Preference number: 4 (lower is better)
Translates to: RLETWPRLLHSCNLGSLLQERRS*RAQCFT
Trigger: AGTAAAACATTGAGCTCTTCAGCTCCGCCTTTCTTG...AAGAAGAGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487101.5
ENST00000492129.5
CDS-3UTR TCA 90 bp GAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGATATTGAAGAAGCCCTaGATTTCCTTCTGGTGTAAA +
Preference number: 4 (lower is better)
Translates to: EIHPTEQSLLCFQFGPREILKKP*ISFWCK
Trigger: TTTACACCAGAAGGAAATTCAGGGCTTCTTCAATAT...CTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp TGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGTGTCAACAGGAATATTaGAGAAGCCCTGAATTTCCT +
Preference number: 4 (lower is better)
Translates to: CEIHPTEQSLLCFQFGPRCQQEY*RSPEFP
Trigger: AGGAAATTCAGGGCTTCTTCAATATTCCTGTTGACA...CCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTGTCAACAGGAATATTaGAGAAGCCCTGAATTTCCT +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFCQQEY*RSPEFP
Trigger: AGGAAATTCAGGGCTTCTTCAATATTCCTGTTGACA...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GGCTCAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTTCCTGCGCCTCTCCATaGATCACTGCAATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSSNFGRRLCELTNLIPSSCASP*ITAIPR
Trigger: CCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGA...ACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp AACATGAAATACGAAGAGAGAGACAAAATGTGGACTATCCATGTAACACAGCATTGGCAGCCACACTTCTaGCCATGGGTGGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: NMKYEERDKMWTIHVTQHWQPHF*PWVGNA
Trigger: GGCATTCCCCACCCATGGTCAGAAGTGTGGCTGCCA...ATGCTGTGTTACATGGATAGTCCACATTTTGTCTCTCTCTTCGTATTTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460724.1
CDS-3UTR TCA 90 bp CTCACAAACACCCAAACCGACATAAAAAGTTGGTCTATCTTCTTAGGAATCAATTGGCAGCCACACTTCTaGCCATGGGTGGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: LTNTQTDIKSWSIFLGINWQPHF*PWVGNA
Trigger: GGCATTCCCCACCCATGGTCAGAAGTGTGGCTGCCA...ATTGATTCCTAAGAAGATAGACCAACTTTTTATGTCGGTTTGGGTGTTTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTGTTATGGCAGCCACACTTCTaGCCATGGGTGGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: QATLEEGFVSLQILFQVLWQPHF*PWVGNA
Trigger: GGCATTCCCCACCCATGGTCAGAAGTGTGGCTGCCA...TAACACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp ACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTGAAGACAACAAGCCATaGGTTGCCATCACAAAGATC +
Preference number: 4 (lower is better)
Translates to: TSMTVPVKSIPPSSHSYVEDNKP*VAITKI
Trigger: GATCTTTGTGATGGCAACTCATGGCTTGTTGTCTTC...AACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATCTAAGCCTATGTTTCTaGAAAGGTAGGACATGGACT +
Preference number: 4 (lower is better)
Translates to: GTSMTVPVKSIPPSSHSYLSLCF*KGRTWT
Trigger: AGTCCATGTCCTACCTTTTCAGAAACATAGGCTTAG...ATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAACTAAGCCTATGTTTCTaGAAAGGTAGGACATGGACT +
Preference number: 4 (lower is better)
Translates to: PPSSHSYVSSLALGSFPKLSLCF*KGRTWT
Trigger: AGTCCATGTCCTACCTTTTCAGAAACATAGGCTTAG...TTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp AGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCCTAAGCCTATGTTTCTaGAAAGGTAGGACATGGACT +
Preference number: 4 (lower is better)
Translates to: SMTVPVKSIPPSSHSYVSLSLCF*KGRTWT
Trigger: AGTCCATGTCCTACCTTTTCAGAAACATAGGCTTAG...GGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATTGGAAGAAGGCTTTGTaGGCTTACAAATCTTATTCC +
Preference number: 4 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHWKKAL*AYKSYS
Trigger: GGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCA...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR GCA 90 bp AATTTGTACTCTTGTTTCTCTGTTAGGTTCCTGGTAAACCTGCACTTTGCCCATGGTAAACCTGCACTTTaGCCATCTCCACCCCTAGCC +
Preference number: 4 (lower is better)
Translates to: NLYSCFSVRFLVNLHFAHGKPAL*PSPPLA
Trigger: GGCTAGGGGTGGAGATGGGCAAAGTGCAGGTTTACC...ATGGGCAAAGTGCAGGTTTACCAGGAACCTAACAGAGAAACAAGAGTACAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571907.5
ENST00000573253.5
CDS-3UTR GCA 90 bp CGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAACTTGGCCACGATTACTaGATTCCTGTAATCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RAVTLMFPVWPSGVFLKELGHDY*IPVIWD
Trigger: ATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAG...TTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp GGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACAACAAGCCATGAGTTaGCATCACAAAGATCTTATA +
Preference number: 4 (lower is better)
Translates to: GYRGEGGTSMTVPVKSIPQQAMS*HHKDLI
Trigger: TATAAGATCTTTGTGATGGCAACTCATGGCTTGTTG...TGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp GGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTCAACAAGCCATGAGTTaGCATCACAAAGATCTTATA +
Preference number: 4 (lower is better)
Translates to: GGTSMTVPVKSIPPSSHSQQAMS*HHKDLI
Trigger: TATAAGATCTTTGTGATGGCAACTCATGGCTTGTTG...AGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GGCTCAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTACTTCTGACCATGGGTaGGGAATGCCGTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: GSSNFGRRLCELTNLIPSTSDHG*GMPSIH
Trigger: GTGGATGGACGGCATTCCCCACCCATGGTCAGAAGT...ACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CCA 90 bp ACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTACCCACAACCGTGATTaGGGGCTTTTCTTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: TSMTVPVKSIPPSSHSYVTHNRD*GLFFRN
Trigger: ATTCCTAAAGAAAAGCCCCCAATCACGGTTGTGGGT...AACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CTTCTGGACTTCATGTGGAATTGTATTGGTGACCACCACCTCATCAATGGCAGACAAGAAAGGCGGAGCTaGAGAGCTCAATGTTTTACT +
Preference number: 4 (lower is better)
Translates to: LLDFMWNCIGDHHLINGRQERRS*RAQCFT
Trigger: AGTAAAACATTGAGCTCTTCAGCTCCGCCTTTCTTG...TCTGCCATTGATGAGGTGGTGGTCACCAATACAATTCCACATGAAGTCCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492129.5
CDS-3UTR TCA 90 bp GCCAATGATGCTCTTGGCACAAGAGGTCTTACATGCATACACCATGATCAGGAGCCCCTCACAGACTCTTaGATTTGTACTCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ANDALGTRGLTCIHHDQEPLTDS*ICTLVS
Trigger: AGAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGG...CTCCTGATCATGGTGTATGCATGTAAGACCTCTTGTGCCAAGAGCATCATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573253.5
CDS-3UTR TCA 90 bp CCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAATCCATAGTAATAAGATaGGTTAGACCAGCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: PPSSHSYVSSLALGSFPKSIVIR*VRPALH
Trigger: GTGCAAAGCTGGTCTAACTCATCTTATTACTATGGA...TTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp AGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCTCCATAGTAATAAGATaGGTTAGACCAGCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: SMTVPVKSIPPSSHSYVSSIVIR*VRPALH
Trigger: GTGCAAAGCTGGTCTAACTCATCTTATTACTATGGA...GGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATTGTCAACAGGAATATTaGAGAAGCCCTGAATTTCCT +
Preference number: 4 (lower is better)
Translates to: GTSMTVPVKSIPPSSHSYCQQEY*RSPEFP
Trigger: AGGAAATTCAGGGCTTCTTCAATATTCCTGTTGACA...ATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp ACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTCTAAGCCTATGTTTCTaGAAAGGTAGGACATGGACT +
Preference number: 4 (lower is better)
Translates to: TSMTVPVKSIPPSSHSYVLSLCF*KGRTWT
Trigger: AGTCCATGTCCTACCTTTTCAGAAACATAGGCTTAG...AACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTGGAAGAAGGCTTTGTaGGCTTACAAATCTTATTCC +
Preference number: 4 (lower is better)
Translates to: HDGSCEIHPTEQSLLCFQWKKAL*AYKSYS
Trigger: GGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCA...CTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GCTGTAAGGAAAGTAGGGTATCACGCCAATGATGCTCTTGGCACAAGAGGTCTTAAATTCCTCCAAAATTaGTTCCTCTTCAGCGGTACC +
Preference number: 4 (lower is better)
Translates to: AVRKVGYHANDALGTRGLKFLQN*FLFSGT
Trigger: GGTACCGCTGAAGAGGAATCAATTTTGGAGGAATTT...AAGACCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCTACTTTCCTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573253.5
CDS-3UTR GCA 90 bp AATTTGTACTCTTGTTTCTCTGTTAGGTTCCTGGTAAACCTGCACTTTGCCCATAAAATGGCGACTCCATaGACAAGATTGGCGTCCGCG +
Preference number: 4 (lower is better)
Translates to: NLYSCFSVRFLVNLHFAHKMATP*TRLASA
Trigger: CGCGGACGCCAATCTTGTGCATGGAGTCGCCATTTT...ATGGGCAAAGTGCAGGTTTACCAGGAACCTAACAGAGAAACAAGAGTACAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571907.5
CDS-3UTR GCA 90 bp CTTGCTGTAAGGAAAGTAGGGTATCACGCCAATGATGCTCTTGGCACAAGAGGTACAAGAGGTCTTACATaGATACACCATGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: LAVRKVGYHANDALGTRGTRGLT*IHHDQE
Trigger: CTCCTGATCATGGTGTATGCATGTAAGACCTCTTGT...ACCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCTACTTTCCTTACAGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
ENST00000573253.5
CDS-3UTR GCA 90 bp AGGAAAGTAGGGTATCACGCCAATGATGCTCTTGGCACAAGAGGTCTTACATGCACAAGAGGTCTTACATaGATACACCATGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: RKVGYHANDALGTRGLTCTRGLT*IHHDQE
Trigger: CTCCTGATCATGGTGTATGCATGTAAGACCTCTTGT...GCATGTAAGACCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCTACTTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573253.5
CDS-3UTR GCA 90 bp AGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTCTTCTTTCATCTTGCACTGCTTaGTGTAAGGAAAGTAGGGTA +
Preference number: 4 (lower is better)
Translates to: RLETWPRLLHSCNLGSLLSSCTA*CKESRV
Trigger: TACCCTACTTTCCTTACAGCAAGCAGTGCAAGATGA...AAGAAGAGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp CTTGCTGTAAGGAAAGTAGGGTATCACGCCAATGATGCTCTTGGCACAAGAGGTTCATCTTGCACTGCTTaGTGTAAGGAAAGTAGGGTA +
Preference number: 4 (lower is better)
Translates to: LAVRKVGYHANDALGTRGSSCTA*CKESRV
Trigger: TACCCTACTTTCCTTACAGCAAGCAGTGCAAGATGA...ACCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCTACTTTCCTTACAGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
ENST00000573253.5
CDS-3UTR GCA 90 bp AACATGAAATACGAAGAGAGAGACAAAATGTGGACTATCCATGTAACACAGCATACCATGGGTGGGGAATaGCGTCCATCCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: NMKYEERDKMWTIHVTQHTMGGE*RPSTKS
Trigger: GGACTTGGTGGATGGACGGCATTCCCCACCCATGGT...ATGCTGTGTTACATGGATAGTCCACATTTTGTCTCTCTCTTCGTATTTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460724.1
CDS-3UTR GCA 90 bp CTCACAAACACCCAAACCGACATAAAAAGTTGGTCTATCTTCTTAGGAATCAATACCATGGGTGGGGAATaGCGTCCATCCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LTNTQTDIKSWSIFLGINTMGGE*RPSTKS
Trigger: GGACTTGGTGGATGGACGGCATTCCCCACCCATGGT...ATTGATTCCTAAGAAGATAGACCAACTTTTTATGTCGGTTTGGGTGTTTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp CATCATGGAAGCCAGCAATTTAGAGACAATGGAGCCTCTTTTTCTCATCTTGCACTTCAGGGTCTCTGCTaGAGCAAGAAAGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: HHGSQQFRDNGASFSHLALQGLC*SKKAVN
Trigger: GTTGACAGCTTTCTTGCTGCAGCAGAGACCCTGAAG...TGCAAGATGAGAAAAAGAGGCTCCATTGTCTCTAAATTGCTGGCTTCCATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR GCA 90 bp TGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGCAACAAGCCATGAGTTaGCATCACAAAGATCTTATA +
Preference number: 4 (lower is better)
Translates to: CEIHPTEQSLLCFQFGPRQQAMS*HHKDLI
Trigger: TATAAGATCTTTGTGATGGCAACTCATGGCTTGTTG...CCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTCAACAAGCCATGAGTTaGCATCACAAAGATCTTATA +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFQQAMS*HHKDLI
Trigger: TATAAGATCTTTGTGATGGCAACTCATGGCTTGTTG...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp GGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCATTTCGGCTTTTCAATTaGAGGTATCATACAGATCAT +
Preference number: 4 (lower is better)
Translates to: GYRGEGGTSMTVPVKSIPFRLFN*RYHTDH
Trigger: ATGATCTGTATGATACCTGCAATTGAAAAGCCGAAA...TGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CTCACAAACACCCAAACCGACATAAAAAGTTGGTCTATCTTCTTAGGAATCAATCCTCTTCGCCGAGGCTaGAGACTTGGCCACGATTAC +
Preference number: 4 (lower is better)
Translates to: LTNTQTDIKSWSIFLGINPLRRG*RLGHDY
Trigger: GTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGG...ATTGATTCCTAAGAAGATAGACCAACTTTTTATGTCGGTTTGGGTGTTTGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp TCCTGTAATCTGGGATCTCTTCTTGAATATACTGTAATAAGAAGGGAGATGCTCACTTCTGACCATGGGTaGGGAATGCCGTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: SCNLGSLLEYTVIRREMLTSDHG*GMPSIH
Trigger: GTGGATGGACGGCATTCCCCACCCATGGTCAGAAGT...GAGCATCTCCCTTCTTATTACAGTATATTCAAGAAGAGATCCCAGATTACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp AACATGAAATACGAAGAGAGAGACAAAATGTGGACTATCCATGTAACACAGCATATCTCCAGGCTGGGGTaGATGGCAGCCACACTTCTG +
Preference number: 4 (lower is better)
Translates to: NMKYEERDKMWTIHVTQHISRLG*MAATLL
Trigger: CAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGAT...ATGCTGTGTTACATGGATAGTCCACATTTTGTCTCTCTCTTCGTATTTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460724.1
CDS-3UTR CCA 90 bp ACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTCTTCTGGACTTCATGTaGAATTGTATTGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: TSMTVPVKSIPPSSHSYVLLDFM*NCIGDH
Trigger: GTGGTCACCAATACAATTCCACATGAAGTCCAGAAG...AACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCAACCGACATAAAAAGTTaGTCTATCTTCTTAGGAATC +
Preference number: 4 (lower is better)
Translates to: GYRGEGGTSMTVPVKSIPTDIKS*SIFLGI
Trigger: GATTCCTAAGAAGATAGACCAACTTTTTATGTCGGT...TGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTAACTTTTTAAGCACTTaGCTCAAGCAACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFNFLST*LKQLWK
Trigger: CTTCCAAAGTTGCTTGAGCCAAGTGCTTAAAAAGTT...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAATCCATAGTAATAAGATaGGTTAGACCAGCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: RAVTLMFPVWPSGVFLKESIVIR*VRPALH
Trigger: GTGCAAAGCTGGTCTAACTCATCTTATTACTATGGA...TTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAATGTCAACAGGAATATTaGAGAAGCCCTGAATTTCCT +
Preference number: 4 (lower is better)
Translates to: RAVTLMFPVWPSGVFLKECQQEY*RSPEFP
Trigger: AGGAAATTCAGGGCTTCTTCAATATTCCTGTTGACA...TTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp AGAAAGCTGTCAACATCATCAATGATGTCATCCACGATGATGGCAATCCTTCCTGTGGAATTGTATTGGTaGCCACCACCTCATCAATGG +
Preference number: 4 (lower is better)
Translates to: RKLSTSSMMSSTMMAILPVELYW*PPPHQW
Trigger: CCATTGATGAGGTGGTGGTCACCAATACAATTCCAC...AGGAAGGATTGCCATCATCGTGGATGACATCATTGATGATGTTGACAGCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR TCA 90 bp TGCTGCAGCAAGAAAGCTGTCAACATCATCAATGATGTCATCCACGATGATGGCCTAAGCCTATGTTTCTaGAAAGGTAGGACATGGACT +
Preference number: 4 (lower is better)
Translates to: CCSKKAVNIINDVIHDDGLSLCF*KGRTWT
Trigger: AGTCCATGTCCTACCTTTTCAGAAACATAGGCTTAG...GCCATCATCGTGGATGACATCATTGATGATGTTGACAGCTTTCTTGCTGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR TCA 90 bp CTTGCTGTAAGGAAAGTAGGGTATCACGCCAATGATGCTCTTGGCACAAGAGGTGTCATTTACTGGACTTaGCAGTATAATCTTTTCGGC +
Preference number: 4 (lower is better)
Translates to: LAVRKVGYHANDALGTRGVIYWT*QYNLFG
Trigger: GCCGAAAAGATTATACTGTCAAGTCCAGTAAATGAC...ACCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCTACTTTCCTTACAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492129.5
CDS-3UTR GCA 90 bp CTCACAAACACCCAAACCGACATAAAAAGTTGGTCTATCTTCTTAGGAATCAATCTCTCCATGAATCACTaGAATTCCCAGGCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LTNTQTDIKSWSIFLGINLSMNH*NSQAQA
Trigger: CGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAG...ATTGATTCCTAAGAAGATAGACCAACTTTTTATGTCGGTTTGGGTGTTTGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp GGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATCAACAAGCCATGAGTTaGCATCACAAAGATCTTATA +
Preference number: 4 (lower is better)
Translates to: GTSMTVPVKSIPPSSHSYQQAMS*HHKDLI
Trigger: TATAAGATCTTTGTGATGGCAACTCATGGCTTGTTG...ATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATTTTCGGCTTTTCAATTaGAGGTATCATACAGATCAT +
Preference number: 4 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHFRLFN*RYHTDH
Trigger: ATGATCTGTATGATACCTGCAATTGAAAAGCCGAAA...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR GCA 90 bp CTCACAAACACCCAAACCGACATAAAAAGTTGGTCTATCTTCTTAGGAATCAATGCCGAGGTTGCAGTGTaGCATGATTGCACCACTGCA +
Preference number: 4 (lower is better)
Translates to: LTNTQTDIKSWSIFLGINAEVAV*HDCTTA
Trigger: TGCAGTGGTGCAATCATGGCACACTGCAACCTCGGC...ATTGATTCCTAAGAAGATAGACCAACTTTTTATGTCGGTTTGGGTGTTTGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574451.5
CDS-3UTR CCA 90 bp AACATGAAATACGAAGAGAGAGACAAAATGTGGACTATCCATGTAACACAGCATACTTCTGACCATGGGTaGGGAATGCCGTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: NMKYEERDKMWTIHVTQHTSDHG*GMPSIH
Trigger: GTGGATGGACGGCATTCCCCACCCATGGTCAGAAGT...ATGCTGTGTTACATGGATAGTCCACATTTTGTCTCTCTCTTCGTATTTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460724.1
CDS-3UTR CCA 90 bp AGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAAAACTTATGTTTCCAGTTTaGCCCTCGGGAGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: SSHSYVSSLALGSFPKGKLMFPV*PSGVFL
Trigger: TAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAG...TTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTACCGACATAAAAAGTTaGTCTATCTTCTTAGGAATC +
Preference number: 4 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFTDIKS*SIFLGI
Trigger: GATTCCTAAGAAGATAGACCAACTTTTTATGTCGGT...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CTTCTGGACTTCATGTGGAATTGTATTGGTGACCACCACCTCATCAATGGCAGATGTCAACAGGAATATTaGAGAAGCCCTGAATTTCCT +
Preference number: 4 (lower is better)
Translates to: LLDFMWNCIGDHHLINGRCQQEY*RSPEFP
Trigger: AGGAAATTCAGGGCTTCTTCAATATTCCTGTTGACA...TCTGCCATTGATGAGGTGGTGGTCACCAATACAATTCCACATGAAGTCCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR TCA 90 bp CTCACAAACACCCAAACCGACATAAAAAGTTGGTCTATCTTCTTAGGAATCAATCCGACGGATCGCCTCTaGAAGGATCATGCTGATATC +
Preference number: 4 (lower is better)
Translates to: LTNTQTDIKSWSIFLGINPTDRL*KDHADI
Trigger: GATATCAGCATGATCCTTTCAGAGGCGATCCGTCGG...ATTGATTCCTAAGAAGATAGACCAACTTTTTATGTCGGTTTGGGTGTTTGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTGTTACCGACGGATCGCCTCTaGAAGGATCATGCTGATATC +
Preference number: 4 (lower is better)
Translates to: QATLEEGFVSLQILFQVLPTDRL*KDHADI
Trigger: GATATCAGCATGATCCTTTCAGAGGCGATCCGTCGG...TAACACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR TCA 90 bp GGCTCAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTGGAATCAATAAGAAGTaGGGTTACAGGGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GSSNFGRRLCELTNLIPSGINKK*GYRGEG
Trigger: TCCCTCTCCCCTGTAACCTCACTTCTTATTGATTCC...ACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR GCA 90 bp CTGGGATCTCTTCTTGAATATACTGTAATAAGAAGGGAGATGCTCTTAAATTGTCTCTCCATGAATCACTaGAATTCCCAGGCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LGSLLEYTVIRREMLLNCLSMNH*NSQAQA
Trigger: CGCCTGCGCCTGGGAATTGCAGTGATTCATGGAGAG...ACAATTTAAGAGCATCTCCCTTCTTATTACAGTATATTCAAGAAGAGATCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp AGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCTTTCGGCTTTTCAATTaGAGGTATCATACAGATCAT +
Preference number: 4 (lower is better)
Translates to: SMTVPVKSIPPSSHSYVSFRLFN*RYHTDH
Trigger: ATGATCTGTATGATACCTGCAATTGAAAAGCCGAAA...GGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CCA 90 bp CCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAACCGACATAAAAAGTTaGTCTATCTTCTTAGGAATC +
Preference number: 4 (lower is better)
Translates to: PPSSHSYVSSLALGSFPKTDIKS*SIFLGI
Trigger: GATTCCTAAGAAGATAGACCAACTTTTTATGTCGGT...TTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CTTCTGGACTTCATGTGGAATTGTATTGGTGACCACCACCTCATCAATGGCAGAATATTGAAGAAGCCCTaGATTTCCTTCTGGTGTAAA +
Preference number: 4 (lower is better)
Translates to: LLDFMWNCIGDHHLINGRILKKP*ISFWCK
Trigger: TTTACACCAGAAGGAAATTCAGGGCTTCTTCAATAT...TCTGCCATTGATGAGGTGGTGGTCACCAATACAATTCCACATGAAGTCCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR GCA 90 bp ATGTCATTTACTGGACTTGACAGTATAATCTTTTCGGCTTTTCAATTGCAGGTAAAAATGGCGACTCCATaGACAAGATTGGCGTCCGCG +
Preference number: 4 (lower is better)
Translates to: MSFTGLDSIIFSAFQLQVKMATP*TRLASA
Trigger: CGCGGACGCCAATCTTGTGCATGGAGTCGCCATTTT...TACCTGCAATTGAAAAGCCGAAAAGATTATACTGTCAAGTCCAGTAAATGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268835.7
ENST00000536323.5
CDS-3UTR GCA 90 bp AACATGAAATACGAAGAGAGAGACAAAATGTGGACTATCCATGTAACACAGCATCTTCAGGGTCTCTGCTaGAGCAAGAAAGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: NMKYEERDKMWTIHVTQHLQGLC*SKKAVN
Trigger: GTTGACAGCTTTCTTGCTGCAGCAGAGACCCTGAAG...ATGCTGTGTTACATGGATAGTCCACATTTTGTCTCTCTCTTCGTATTTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460724.1
CDS-3UTR GCA 90 bp AGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAAAACACAAAGATCTTATATaGACCTCTTTCCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SSHSYVSSLALGSFPKGKHKDLI*TSFLQG
Trigger: ACCCTGAAGGAAAGAGGTGCATATAAGATCTTTGTG...TTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp ACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTTTCGGCTTTTCAATTaGAGGTATCATACAGATCAT +
Preference number: 4 (lower is better)
Translates to: TSMTVPVKSIPPSSHSYVFRLFN*RYHTDH
Trigger: ATGATCTGTATGATACCTGCAATTGAAAAGCCGAAA...AACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AATTTGTACTCTTGTTTCTCTGTTAGGTTCCTGGTAAACCTGCACTTTGCCCATTCTCTAGGAGCAAAATaGCGACTCCATGCACAAGAT +
Preference number: 4 (lower is better)
Translates to: NLYSCFSVRFLVNLHFAHSLGAK*RLHAQD
Trigger: ATCTTGTGCATGGAGTCGCCATTTTGCTCCTAGAGA...ATGGGCAAAGTGCAGGTTTACCAGGAACCTAACAGAGAAACAAGAGTACAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571907.5
CDS-3UTR CCA 90 bp CTTGGCTCAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCATTAATCTTGGGGCACTaGAGCTTCTGGACTTCATGT +
Preference number: 4 (lower is better)
Translates to: LGSSNFGRRLCELTNLIPLILGH*SFWTSC
Trigger: ACATGAAGTCCAGAAGCTCCAGTGCCCCAAGATTAA...TGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CCA 90 bp GGCTCAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTCTTATGTTTCCAGTTTaGCCCTCGGGAGTTTTCCTA +
Preference number: 4 (lower is better)
Translates to: GSSNFGRRLCELTNLIPSLMFPV*PSGVFL
Trigger: TAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAG...ACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGGGTCTCTGCTGCAGCAAGAAAGCTGTCAACATCATCAATGATGTCATCCACGACCGACATAAAAAGTTaGTCTATCTTCTTAGGAATC +
Preference number: 4 (lower is better)
Translates to: RVSAAARKLSTSSMMSSTTDIKS*SIFLGI
Trigger: GATTCCTAAGAAGATAGACCAACTTTTTATGTCGGT...CGTGGATGACATCATTGATGATGTTGACAGCTTTCTTGCTGCAGCAGAGACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR TCA 90 bp AATTTGTACTCTTGTTTCTCTGTTAGGTTCCTGGTAAACCTGCACTTTGCCCATCCCCTCACAGACTCTTaGATTTGTACTCTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: NLYSCFSVRFLVNLHFAHPLTDS*ICTLVS
Trigger: AGAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGG...ATGGGCAAAGTGCAGGTTTACCAGGAACCTAACAGAGAAACAAGAGTACAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571907.5
ENST00000573253.5
CDS-3UTR TCA 90 bp AGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAAAAATATTGAAGAAGCCCTaGATTTCCTTCTGGTGTAAA +
Preference number: 4 (lower is better)
Translates to: SSHSYVSSLALGSFPKGKILKKP*ISFWCK
Trigger: TTTACACCAGAAGGAAATTCAGGGCTTCTTCAATAT...TTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CTCACAAACACCCAAACCGACATAAAAAGTTGGTCTATCTTCTTAGGAATCAATGGAATCAATAAGAAGTaGGGTTACAGGGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LTNTQTDIKSWSIFLGINGINKK*GYRGEG
Trigger: TCCCTCTCCCCTGTAACCTCACTTCTTATTGATTCC...ATTGATTCCTAAGAAGATAGACCAACTTTTTATGTCGGTTTGGGTGTTTGTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR GCA 90 bp TTTGCACATCATGGAAGCCAGCAATTTAGAGACAATGGAGCCTCTTTTTCTCATTCATCTTGCACTGCTTaGTGTAAGGAAAGTAGGGTA +
Preference number: 4 (lower is better)
Translates to: FAHHGSQQFRDNGASFSHSSCTA*CKESRV
Trigger: TACCCTACTTTCCTTACAGCAAGCAGTGCAAGATGA...ATGAGAAAAAGAGGCTCCATTGTCTCTAAATTGCTGGCTTCCATGATGTGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CCA 90 bp AACATGAAATACGAAGAGAGAGACAAAATGTGGACTATCCATGTAACACAGCATGGCAAATCTCATCAATaGCAGACTCTTCAATCCGCC +
Preference number: 4 (lower is better)
Translates to: NMKYEERDKMWTIHVTQHGKSHQ*QTLQSA
Trigger: GGCGGATTGAAGAGTCTGCCATTGATGAGATTTGCC...ATGCTGTGTTACATGGATAGTCCACATTTTGTCTCTCTCTTCGTATTTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460724.1
CDS-3UTR TCA 90 bp AACATGAAATACGAAGAGAGAGACAAAATGTGGACTATCCATGTAACACAGCATGAAGACAACAAGCCATaGGTTGCCATCACAAAGATC +
Preference number: 4 (lower is better)
Translates to: NMKYEERDKMWTIHVTQHEDNKP*VAITKI
Trigger: GATCTTTGTGATGGCAACTCATGGCTTGTTGTCTTC...ATGCTGTGTTACATGGATAGTCCACATTTTGTCTCTCTCTTCGTATTTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460724.1
CDS-3UTR TCA 90 bp TCCTGTAATCTGGGATCTCTTCTTGAATATACTGTAATAAGAAGGGAGATGCTCCTAAGCCTATGTTTCTaGAAAGGTAGGACATGGACT +
Preference number: 4 (lower is better)
Translates to: SCNLGSLLEYTVIRREMLLSLCF*KGRTWT
Trigger: AGTCCATGTCCTACCTTTTCAGAAACATAGGCTTAG...GAGCATCTCCCTTCTTATTACAGTATATTCAAGAAGAGATCCCAGATTACAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR TCA 90 bp GGCTCAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTTGGAAGAAGGCTTTGTaGGCTTACAAATCTTATTCC +
Preference number: 4 (lower is better)
Translates to: GSSNFGRRLCELTNLIPSWKKAL*AYKSYS
Trigger: GGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCA...ACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR GCA 90 bp ATGATGGTGGTGTTCACGTCCTTCGAAACAGTTTGGATGATGAAAACATCTTTTTCATCTTGCACTGCTTaGTGTAAGGAAAGTAGGGTA +
Preference number: 4 (lower is better)
Translates to: MMVVFTSFETVWMMKTSFSSCTA*CKESRV
Trigger: TACCCTACTTTCCTTACAGCAAGCAGTGCAAGATGA...AAAAGATGTTTTCATCATCCAAACTGTTTCGAAGGACGTGAACACCACCATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573253.5
CDS-3UTR GCA 90 bp CTCACAAACACCCAAACCGACATAAAAAGTTGGTCTATCTTCTTAGGAATCAATCTTGGCCACGATTACTaGATTCCTGTAATCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LTNTQTDIKSWSIFLGINLGHDY*IPVIWD
Trigger: ATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAG...ATTGATTCCTAAGAAGATAGACCAACTTTTTATGTCGGTTTGGGTGTTTGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAAAATGCATTCCTGTAATCTaGGATCTCTTCTTGAATATA +
Preference number: 4 (lower is better)
Translates to: SSHSYVSSLALGSFPKGKCIPVI*DLFLNI
Trigger: TATATTCAAGAAGAGATCCCAGATTACAGGAATGCA...TTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CCA 90 bp AACATGAAATACGAAGAGAGAGACAAAATGTGGACTATCCATGTAACACAGCATACCCACAACCGTGATTaGGGGCTTTTCTTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: NMKYEERDKMWTIHVTQHTHNRD*GLFFRN
Trigger: ATTCCTAAAGAAAAGCCCCCAATCACGGTTGTGGGT...ATGCTGTGTTACATGGATAGTCCACATTTTGTCTCTCTCTTCGTATTTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460724.1
CDS-3UTR CCA 90 bp AGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAAAAACCGACATAAAAAGTTaGTCTATCTTCTTAGGAATC +
Preference number: 4 (lower is better)
Translates to: SSHSYVSSLALGSFPKGKTDIKS*SIFLGI
Trigger: GATTCCTAAGAAGATAGACCAACTTTTTATGTCGGT...TTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR TCA 90 bp CTTGGCTCAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAATATTGAAGAAGCCCTaGATTTCCTTCTGGTGTAAA +
Preference number: 4 (lower is better)
Translates to: LGSSNFGRRLCELTNLIPILKKP*ISFWCK
Trigger: TTTACACCAGAAGGAAATTCAGGGCTTCTTCAATAT...TGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR GCA 90 bp ATGTCATTTACTGGACTTGACAGTATAATCTTTTCGGCTTTTCAATTGCAGGTACTTGGCCACGATTACTaGATTCCTGTAATCTGGGAT +
Preference number: 4 (lower is better)
Translates to: MSFTGLDSIIFSAFQLQVLGHDY*IPVIWD
Trigger: ATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAG...TACCTGCAATTGAAAAGCCGAAAAGATTATACTGTCAAGTCCAGTAAATGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR GCA 90 bp AACATGAAATACGAAGAGAGAGACAAAATGTGGACTATCCATGTAACACAGCATCACAAAGATCTTATATaGACCTCTTTCCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: NMKYEERDKMWTIHVTQHHKDLI*TSFLQG
Trigger: ACCCTGAAGGAAAGAGGTGCATATAAGATCTTTGTG...ATGCTGTGTTACATGGATAGTCCACATTTTGTCTCTCTCTTCGTATTTCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460724.1
CDS-3UTR CCA 90 bp AACATGAAATACGAAGAGAGAGACAAAATGTGGACTATCCATGTAACACAGCATGAGAGAGACAAAATGTaGACTATCCATGTAACACAG +
Preference number: 4 (lower is better)
Translates to: NMKYEERDKMWTIHVTQHERDKM*TIHVTQ
Trigger: CTGTGTTACATGGATAGTCCACATTTTGTCTCTCTC...ATGCTGTGTTACATGGATAGTCCACATTTTGTCTCTCTCTTCGTATTTCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460724.1
CDS-3UTR TCA 90 bp CTGGGATCTCTTCTTGAATATACTGTAATAAGAAGGGAGATGCTCTTAAATTGTTGTCAACAGGAATATTaGAGAAGCCCTGAATTTCCT +
Preference number: 4 (lower is better)
Translates to: LGSLLEYTVIRREMLLNCCQQEY*RSPEFP
Trigger: AGGAAATTCAGGGCTTCTTCAATATTCCTGTTGACA...ACAATTTAAGAGCATCTCCCTTCTTATTACAGTATATTCAAGAAGAGATCCCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR GCA 90 bp CTGGGATCTCTTCTTGAATATACTGTAATAAGAAGGGAGATGCTCTTAAATTGTCACAAAGATCTTATATaGACCTCTTTCCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LGSLLEYTVIRREMLLNCHKDLI*TSFLQG
Trigger: ACCCTGAAGGAAAGAGGTGCATATAAGATCTTTGTG...ACAATTTAAGAGCATCTCCCTTCTTATTACAGTATATTCAAGAAGAGATCCCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR GCA 90 bp AACATGAAATACGAAGAGAGAGACAAAATGTGGACTATCCATGTAACACAGCATCAACAAGCCATGAGTTaGCATCACAAAGATCTTATA +
Preference number: 4 (lower is better)
Translates to: NMKYEERDKMWTIHVTQHQQAMS*HHKDLI
Trigger: TATAAGATCTTTGTGATGGCAACTCATGGCTTGTTG...ATGCTGTGTTACATGGATAGTCCACATTTTGTCTCTCTCTTCGTATTTCATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460724.1
CDS-3UTR CCA 90 bp CAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTGTTAAACTTTTTAAGCACTTaGCTCAAGCAACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: QATLEEGFVSLQILFQVLNFLST*LKQLWK
Trigger: CTTCCAAAGTTGCTTGAGCCAAGTGCTTAAAAAGTT...TAACACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS GCA 90 bp GCCGGGTCTCCTGGCGGCCTCTCTAGGAGCAAAATGGCGACTCCATaGACAAGATTGGCGTCCGCGGTGACTGCGAGGCCGGTGGGCGGG +
Preference number: 5 (lower is better)
Translates to: AGSPGGLSRSKMATP*TRLASAVTARPVGG
Trigger: CCCGCCCACCGGCCTCGCAGTCACCGCGGACGCCAATCTTGTGCATGGAGTCGCCATTTTGCTCCTAGAGAGGCCGCCAGGAGACCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419284.6
ENST00000536323.5
ENST00000571907.5
CDS GCA 90 bp GCAGCCCTCCAGTACTTTCACACGAGCCTCTTCCTGCACAGCACCTaGCACTATTGGAGCTATCTCCCACCACACTCCAGGCTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: AALQYFHTSLFLHST*HYWSYLPPHSRLPG
Trigger: CCCTGGGAGCCTGGAGTGTGGTGGGAGATAGCTCCAATAGTGGCAGGTGCTGTGCAGGAAGAGGCTCGTGTGAAAGTACTGGAGGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466106.1
CDS-3UTR CAA 90 bp GGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCTCCACAGTTTTAATCTaGGGGCACTGGAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GWGMPSIHQVRLGILRLSSTVLI*GHWSFW
Trigger: CCAGAAGCTCCAGTGCCCCAAGATTAAAACTGTGGA...GGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS GCA 90 bp CGTGCCCCATGGCAGCCCTCCAGTACTTTCACACGAGCCTCTTCCTaGACAGCACCTGCCACTATTGGAGCTATCTCCCACCACACTCCA +
Preference number: 5 (lower is better)
Translates to: RAPWQPSSTFTRASS*TAPATIGAISHHTP
Trigger: TGGAGTGTGGTGGGAGATAGCTCCAATAGTGGCAGGTGCTGTGCAGGAAGAGGCTCGTGTGAAAGTACTGGAGGGCTGCCATGGGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466106.1
CDS-3UTR CAA 90 bp CATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCACGCCAATGATGCTCTaGGCACAAGAGGTCTTACAT +
Preference number: 5 (lower is better)
Translates to: HGWGMPSIHQVRLGILRLTPMML*AQEVLH
Trigger: ATGTAAGACCTCTTGTGCCAAGAGCATCATTGGCGT...GAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp TGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCACGCCAATGATGCTCTaGGCACAAGAGGTCTTACAT +
Preference number: 5 (lower is better)
Translates to: WVGNAVHPPSPTRHPAPLTPMML*AQEVLH
Trigger: ATGTAAGACCTCTTGTGCCAAGAGCATCATTGGCGT...GAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp GGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCAGACATGGACTCCCCATaGTGGATCCGACGGATCGCC +
Preference number: 5 (lower is better)
Translates to: GYRGEGGTSMTVPVKSIPDMDSP*WIRRIA
Trigger: GGCGATCCGTCGGATCCACAATGGGGAGTCCATGTC...TGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp ATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTTCTTATGTTTCCAGTTaGGCCCTCGGGAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: MGGECRPSTKSDSASCASSYVSS*ALGSFP
Trigger: AGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGA...AGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CAA 90 bp CATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCACTCCATGCACAAGATaGGCGTCCGCGGTGACTGCG +
Preference number: 5 (lower is better)
Translates to: HPTEQSLLCFQFGPREFSTPCTR*ASAVTA
Trigger: CGCAGTCACCGCGGACGCCAATCTTGTGCATGGAGT...GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536323.5
CDS CCA 90 bp CACAACCGTGATTGGGGGCTTTTCTTTAGGAATCAGCACTGGGCATaGTGGCATGTACCGGTAGTCCCAGCTACCCAGGAGAATCGCCTG +
Preference number: 5 (lower is better)
Translates to: HNRDWGLFFRNQHWA*WHVPVVPATQENRL
Trigger: CAGGCGATTCTCCTGGGTAGCTGGGACTACCGGTACATGCCACCATGCCCAGTGCTGATTCCTAAAGAAAAGCCCCCAATCACGGTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574451.5
CDS-3UTR CAA 90 bp GACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCAACACCAGACCACCTTaGGTTATGTTCATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: DHGWGMPSIHQVRLGILRNTRPP*VMFILV
Trigger: AACCAAGATGAACATAACCAAAGGTGGTCTGGTGTT...GCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp GCCACACTTCTGACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGACGCCAATGATGCTCTaGGCACAAGAGGTCTTACAT +
Preference number: 5 (lower is better)
Translates to: ATLLTMGGECRPSTKSDSTPMML*AQEVLH
Trigger: ATGTAAGACCTCTTGTGCCAAGAGCATCATTGGCGT...CGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTCAGAAGTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp CATGGGGATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTGGTCATGTGGAATTGTATaGGTGACCACCACCTCATCA +
Preference number: 5 (lower is better)
Translates to: HGDLQAGVDGSHTSDHGWSCGIV*VTTTSS
Trigger: TGATGAGGTGGTGGTCACCAATACAATTCCACATGA...CCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATCCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CAA 90 bp TCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTGACATGGACTCCCCATaGTGGATCCGACGGATCGCC +
Preference number: 5 (lower is better)
Translates to: SIPPSSHSYVSSLALGSFDMDSP*WIRRIA
Trigger: GGCGATCCGTCGGATCCACAATGGGGAGTCCATGTC...AAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATGACATGGACTCCCCATaGTGGATCCGACGGATCGCC +
Preference number: 5 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHDMDSP*WIRRIA
Trigger: GGCGATCCGTCGGATCCACAATGGGGAGTCCATGTC...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATTCCCAGGCAATCTGGGATCAGCTTaGCACATCATGGAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: PSPTRHPAPLHESLQFPGNLGSA*HIMEAS
Trigger: GCTGGCTTCCATGATGTGCAAAGCTGATCCCAGATT...GCCTGGGAATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455992.6
CDS-3UTR CAA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCTGGGAGGCCGAGGTaGCAGTGTGCCATGATTGCA +
Preference number: 5 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHPGRPR*QCAMIA
Trigger: TGCAATCATGGCACACTGCAACCTCGGCCTCCCAGG...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574451.5
CDS-3UTR CAA 90 bp GGGATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTGGGGAATCCCCTCACAGACTCTaGAATTTGTACTCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: GISRLGWMAATLLTMGGESPHRL*NLYSCF
Trigger: GAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGGA...TTCCCCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455992.6
CDS-3UTR CAA 90 bp CCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGACATGGACTCCCCATaGTGGATCCGACGGATCGCC +
Preference number: 5 (lower is better)
Translates to: PPSSHSYVSSLALGSFPKDMDSP*WIRRIA
Trigger: GGCGATCCGTCGGATCCACAATGGGGAGTCCATGTC...TTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCTCCCCTCACAGACTCTaGAATTTGTACTCTTGTTTT +
Preference number: 5 (lower is better)
Translates to: DHGWGMPSIHQVRLGILRSPHRL*NLYSCF
Trigger: AAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGGA...GCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS GCA 90 bp AGACTGTGCCCTCTTCGCCGAGGCTGGAGACTTGGCCACGATTACTaGATTCCTGTAATCTGGGATCAGCTTTGCACATCATGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: RLCPLRRGWRLGHDY*IPVIWDQLCTSWKP
Trigger: TGGCTTCCATGATGTGCAAAGCTGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGGGCACAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455992.6
CDS GCA 90 bp CTATCTCCCACCACACTCCAGGCTCCCAGGGGTAGCACTGTTTTCTaGACCATAACTGGCCAACATTGTGCTGTCACAATGCAGGTCACA +
Preference number: 5 (lower is better)
Translates to: LSPTTLQAPRGSTVF*TITGQHCAVTMQVT
Trigger: TGTGACCTGCATTGTGACAGCACAATGTTGGCCAGTTATGGTGCAGAAAACAGTGCTACCCCTGGGAGCCTGGAGTGTGGTGGGAGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466106.1
CDS CCA 90 bp CTTGTTTCCTCATCAAAATTGATTCCTCTTCAGCGGTACCTCGGCTaGGCTCACGTCCCTTCTGCGCTGGCATCTAACTCCGGTCACAAC +
Preference number: 5 (lower is better)
Translates to: LVSSSKLIPLQRYLG*AHVPSALASNSGHN
Trigger: GTTGTGACCGGAGTTAGATGCCAGCGCAGAAGGGACGTGAGCCCAGCCGAGGTACCGCTGAAGAGGAATCAATTTTGATGAGGAAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574522.5
CDS-3UTR CAA 90 bp GGGATCTCCAGGCTGGGGTGGATGGCAGCCACACTTCTGACCATGGGTGGGGAAATGATGAATTCGAGTTaGCTGAAAACAACACCAGAC +
Preference number: 5 (lower is better)
Translates to: GISRLGWMAATLLTMGGEMMNSS*LKTTPD
Trigger: GTCTGGTGTTGTTTTCAGCAAACTCGAATTCATCAT...TTCCCCACCCATGGTCAGAAGTGTGGCTGCCATCCACCCCAGCCTGGAGATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp GGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGACGCCAATGATGCTCTaGGCACAAGAGGTCTTACAT +
Preference number: 5 (lower is better)
Translates to: GRGRNKHDGSCEIHPTEQTPMML*AQEVLH
Trigger: ATGTAAGACCTCTTGTGCCAAGAGCATCATTGGCGT...CTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp AGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCACGCCAATGATGCTCTaGGCACAAGAGGTCTTACAT +
Preference number: 5 (lower is better)
Translates to: RGEGGTSMTVPVKSIPPSTPMML*AQEVLH
Trigger: ATGTAAGACCTCTTGTGCCAAGAGCATCATTGGCGT...GCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCGGAGATGCTCTTAAATaGTCAACAGGAATATTGAAG +
Preference number: 5 (lower is better)
Translates to: DHGWGMPSIHQVRLGILRGDALK*STGILK
Trigger: CTTCAATATTCCTGTTGACAATTTAAGAGCATCTCC...GCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp GGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTTCCACAGTTTTAATCTaGGGGCACTGGAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GEGGTSMTVPVKSIPPSSSTVLI*GHWSFW
Trigger: CCAGAAGCTCCAGTGCCCCAAGATTAAAACTGTGGA...ACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp ACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTGACATGGACTCCCCATaGTGGATCCGACGGATCGCC +
Preference number: 5 (lower is better)
Translates to: TSMTVPVKSIPPSSHSYVDMDSP*WIRRIA
Trigger: GGCGATCCGTCGGATCCACAATGGGGAGTCCATGTC...AACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GCCACACTTCTGACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGTTTCCTCATCAAAATaGATTCCTCTTCAGCGGTAC +
Preference number: 5 (lower is better)
Translates to: ATLLTMGGECRPSTKSDSVSSSK*IPLQRY
Trigger: GTACCGCTGAAGAGGAATCAATTTTGATGAGGAAAC...CGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTCAGAAGTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487101.5
CDS CCA 90 bp AACAAAATTCCTCCAAAATTGATTCCTCTTCAGCGGTACCTCGGCTaGGCTCACGTCCCTTCTGCGCTGGCATCTAACTCCGGTCACAAC +
Preference number: 5 (lower is better)
Translates to: NKIPPKLIPLQRYLG*AHVPSALASNSGHN
Trigger: GTTGTGACCGGAGTTAGATGCCAGCGCAGAAGGGACGTGAGCCCAGCCGAGGTACCGCTGAAGAGGAATCAATTTTGGAGGAATTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000419071.6
ENST00000492129.5
ENST00000573432.5
ENST00000610773.4
CDS CCA 90 bp ATTATCTGCATACCAAAATTGATTCCTCTTCAGCGGTACCTCGGCTaGGCTCACGTCCCTTCTGCGCTGGCATCTAACTCCGGTCACAAC +
Preference number: 5 (lower is better)
Translates to: IICIPKLIPLQRYLG*AHVPSALASNSGHN
Trigger: GTTGTGACCGGAGTTAGATGCCAGCGCAGAAGGGACGTGAGCCCAGCCGAGGTACCGCTGAAGAGGAATCAATTTTGGTATGCAGATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432893.6
ENST00000570450.5
CDS-3UTR CAA 90 bp GCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGGCTCTGCAATTTTCTTaGATAGCTCCATACATGATG +
Preference number: 5 (lower is better)
Translates to: AVHPPSPTRHPAPLHESLALQFS*IAPYMM
Trigger: CATCATGTATGGAGCTATCAAAGAAAATTGCAGAGC...CAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455992.6
CDS-3UTR CAA 90 bp GGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTTCTTATGTTTCCAGTTaGGCCCTCGGGAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: GEGGTSMTVPVKSIPPSSSYVSS*ALGSFP
Trigger: AGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGA...ACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp ATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCACAGACTCTTGAATTaGTACTCTTGTTTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: MGGECRPSTKSDSASCASHRLLN*YSCFLQ
Trigger: TTGCAGAAAACAAGAGTACAAATTCAAGAGTCTGTG...AGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS GCA 90 bp GGGTTTGCCTTCCAGCTACTAGGCCATGTGGACATCACTTGTCCTTaGTGGGCCTCAGCCTTTACCTTCCAGACAAGAGATATAACCTTG +
Preference number: 5 (lower is better)
Translates to: GFAFQLLGHVDITCP*WASAFTFQTRDITL
Trigger: CAAGGTTATATCTCTTGTCTGGAAGGTAAAGGCTGAGGCCCAGCAAGGACAAGTGATGTCCACATGGCCTAGTAGCTGGAAGGCAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422237.5
CDS-3UTR CAA 90 bp GGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGAACACCAGACCACCTTaGGTTATGTTCATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: GRGRNKHDGSCEIHPTEQNTRPP*VMFILV
Trigger: AACCAAGATGAACATAACCAAAGGTGGTCTGGTGTT...CTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GCCACACTTCTGACCATGGGTGGGGAATGCCGTCCATCCACCAAGTCCGACTCGGTCCTTCGAAACAGTTaGGATGATGAAAACATCTTT +
Preference number: 5 (lower is better)
Translates to: ATLLTMGGECRPSTKSDSVLRNS*DDENIF
Trigger: AAAGATGTTTTCATCATCCAAACTGTTTCGAAGGAC...CGAGTCGGACTTGGTGGATGGACGGCATTCCCCACCCATGGTCAGAAGTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp GGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCAACGCCAATGATGCTCTaGGCACAAGAGGTCTTACAT +
Preference number: 5 (lower is better)
Translates to: GYRGEGGTSMTVPVKSIPTPMML*AQEVLH
Trigger: ATGTAAGACCTCTTGTGCCAAGAGCATCATTGGCGT...TGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp TGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGTCCACAGTTTTAATCTaGGGGCACTGGAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: CEIHPTEQSLLCFQFGPRSTVLI*GHWSFW
Trigger: CCAGAAGCTCCAGTGCCCCAAGATTAAAACTGTGGA...CCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp TCGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTTCTTATGTTTCCAGTTaGGCCCTCGGGAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: SPRLETWPRLLHSCNLGSSYVSS*ALGSFP
Trigger: AGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGA...AGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS TCA 90 bp TGGACAAGTCATTTCAACCCTCTGAGCTTGTTTCCTCATCAAAATTaGTTCCTCTTCAGCGGTACCTCGGCTGGGCTCACGTCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: WTSHFNPLSLFPHQN*FLFSGTSAGLTSLL
Trigger: CAGAAGGGACGTGAGCCCAGCCGAGGTACCGCTGAAGAGGAATCAATTTTGATGAGGAAACAAGCTCAGAGGGTTGAAATGACTTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574522.5
CDS GCA 90 bp GGGTTTGCCTTCCAGCTACTAGGCCATGTGGACATCACTTGTCCTTaGTGGGCCTCAGCCTTTACCTTCCAGACAAGAGATATAACTCAA +
Preference number: 5 (lower is better)
Translates to: GFAFQLLGHVDITCP*WASAFTFQTRDITQ
Trigger: TTGAGTTATATCTCTTGTCTGGAAGGTAAAGGCTGAGGCCCAGCAAGGACAAGTGATGTCCACATGGCCTAGTAGCTGGAAGGCAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575102.5
CDS CCA 90 bp TTTGCCTTCCAGCTACTAGGCCATGTGGACATCACTTGTCCTTGCTaGGCCTCAGCCTTTACCTTCCAGACAAGAGATATAACTCAAGGC +
Preference number: 5 (lower is better)
Translates to: FAFQLLGHVDITCPC*ASAFTFQTRDITQG
Trigger: GCCTTGAGTTATATCTCTTGTCTGGAAGGTAAAGGCTGAGGCCCAGCAAGGACAAGTGATGTCCACATGGCCTAGTAGCTGGAAGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575102.5
CDS-3UTR CAA 90 bp TCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAATAACACCAGACCACCTTaGGTTATGTTCATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: SIHQVRLGILRLSMNHCNNTRPP*VMFILV
Trigger: AACCAAGATGAACATAACCAAAGGTGGTCTGGTGTT...ATTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp GTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAAATGATGAATTCGAGTTaGCTGAAAACAACACCAGAC +
Preference number: 5 (lower is better)
Translates to: VHPPSPTRHPAPLHESLQMMNSS*LKTTPD
Trigger: GTCTGGTGTTGTTTTCAGCAAACTCGAATTCATCAT...TTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000455992.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp TGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGACGCCAATGATGCTCTaGGCACAAGAGGTCTTACAT +
Preference number: 5 (lower is better)
Translates to: CEIHPTEQSLLCFQFGPRTPMML*AQEVLH
Trigger: ATGTAAGACCTCTTGTGCCAAGAGCATCATTGGCGT...CCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTCATGTGGAATTGTATaGGTGACCACCACCTCATCA +
Preference number: 5 (lower is better)
Translates to: EIHPTEQSLLCFQFGPRESCGIV*VTTTSS
Trigger: TGATGAGGTGGTGGTCACCAATACAATTCCACATGA...CTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATTCCACAGTTTTAATCTaGGGGCACTGGAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GTSMTVPVKSIPPSSHSYSTVLI*GHWSFW
Trigger: CCAGAAGCTCCAGTGCCCCAAGATTAAAACTGTGGA...ATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAATCCACAGTTTTAATCTaGGGGCACTGGAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PPSSHSYVSSLALGSFPKSTVLI*GHWSFW
Trigger: CCAGAAGCTCCAGTGCCCCAAGATTAAAACTGTGGA...TTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCTTATGTTTCCAGTTaGGCCCTCGGGAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFSYVSS*ALGSFP
Trigger: AGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGA...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGTCCCCTCACAGACTCTaGAATTTGTACTCTTGTTTT +
Preference number: 5 (lower is better)
Translates to: QGRGRNKHDGSCEIHPTESPHRL*NLYSCF
Trigger: AAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGGA...CTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGAAAATTCCTCCAAAATaGATTCCTCTTCAGCGGTAC +
Preference number: 5 (lower is better)
Translates to: GRGRNKHDGSCEIHPTEQKIPPK*IPLQRY
Trigger: GTACCGCTGAAGAGGAATCAATTTTGGAGGAATTTT...CTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419071.6
ENST00000492129.5
ENST00000610773.4
CDS CCA 90 bp TTTGCCTTCCAGCTACTAGGCCATGTGGACATCACTTGTCCTTGCTaGGCCTCAGCCTTTACCTTCCAGACAAGAGATATAACCTTGGTA +
Preference number: 5 (lower is better)
Translates to: FAFQLLGHVDITCPC*ASAFTFQTRDITLV
Trigger: TACCAAGGTTATATCTCTTGTCTGGAAGGTAAAGGCTGAGGCCCAGCAAGGACAAGTGATGTCCACATGGCCTAGTAGCTGGAAGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422237.5
CDS-3UTR CAA 90 bp GGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCAAACACCAGACCACCTTaGGTTATGTTCATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: GYRGEGGTSMTVPVKSIPNTRPP*VMFILV
Trigger: AACCAAGATGAACATAACCAAAGGTGGTCTGGTGTT...TGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GTCCATCCACCAAGTCCGACTCGGCATCCTGCGCCTCTCCATGAATCACTGCAAGGAGATGCTCTTAAATaGTCAACAGGAATATTGAAG +
Preference number: 5 (lower is better)
Translates to: VHPPSPTRHPAPLHESLQGDALK*STGILK
Trigger: CTTCAATATTCCTGTTGACAATTTAAGAGCATCTCC...TTGCAGTGATTCATGGAGAGGCGCAGGATGCCGAGTCGGACTTGGTGGATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp AGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCTCTTATGTTTCCAGTTaGGCCCTCGGGAGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: SMTVPVKSIPPSSHSYVSSYVSS*ALGSFP
Trigger: AGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGA...GGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp AGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCTTTTCGGCTTTTCAATaGCAGGTATCATACAGATCA +
Preference number: 5 (lower is better)
Translates to: RGEGGTSMTVPVKSIPPSFSAFQ*QVSYRS
Trigger: TGATCTGTATGATACCTGCAATTGAAAAGCCGAAAA...GCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTCTCCCCTCACAGACTCTaGAATTTGTACTCTTGTTTT +
Preference number: 5 (lower is better)
Translates to: RRGWRLGHDYCIPVIWDLSPHRL*NLYSCF
Trigger: AAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGGA...GAGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp AATTTGTACTCTTGTTTCTCTGTTAGGTTCCTGGTAAACCTGCACTTTGCCCATACTCCATGCACAAGATaGGCGTCCGCGGTGACTGCG +
Preference number: 5 (lower is better)
Translates to: NLYSCFSVRFLVNLHFAHTPCTR*ASAVTA
Trigger: CGCAGTCACCGCGGACGCCAATCTTGTGCATGGAGT...ATGGGCAAAGTGCAGGTTTACCAGGAACCTAACAGAGAAACAAGAGTACAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571907.5
CDS-3UTR CAA 90 bp AGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTCTTCTTCACTGGCCTGTAACCTaGGACAAGTCATTTCAACCC +
Preference number: 5 (lower is better)
Translates to: RLETWPRLLHSCNLGSLLHWPVT*DKSFQP
Trigger: GGGTTGAAATGACTTGTCCAAGGTTACAGGCCAGTG...AAGAAGAGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487101.5
CDS TCA 90 bp AAGGCTGCAAAGCCTCTAAGCAGCAAAAATAGCTCGGTCTCAGCATaGTTTGTAGTAGTTAGTCCTATGCAACAGTGGGCTGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: KAAKPLSSKNSSVSA*FVVVSPMQQWAAQP
Trigger: AGGCTGTGCAGCCCACTGTTGCATAGGACTAACTACTACAAATCATGCTGAGACCGAGCTATTTTTGCTGCTTAGAGGCTTTGCAGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419284.6
ENST00000570450.5
ENST00000575102.5
CDS CCA 90 bp ATCCACAGTTTTAATCTTGGGGCACTGGAGCTTCTGGACTTCATGTaGAATTGTATTGGTGACCACCACCACGATGATGGCAATCCTTCC +
Preference number: 5 (lower is better)
Translates to: IHSFNLGALELLDFM*NCIGDHHHDDGNPS
Trigger: GGAAGGATTGCCATCATCGTGGTGGTGGTCACCAATACAATTCCACATGAAGTCCAGAAGCTCCAGTGCCCCAAGATTAAAACTGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542013.5
CDS-3UTR CAA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTAACACCAGACCACCTTaGGTTATGTTCATCTTGGTT +
Preference number: 5 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFNTRPP*VMFILV
Trigger: AACCAAGATGAACATAACCAAAGGTGGTCTGGTGTT...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCAATGATGAATTCGAGTTaGCTGAAAACAACACCAGAC +
Preference number: 5 (lower is better)
Translates to: GYRGEGGTSMTVPVKSIPMMNSS*LKTTPD
Trigger: GTCTGGTGTTGTTTTCAGCAAACTCGAATTCATCAT...TGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGATGATGAATTCGAGTTaGCTGAAAACAACACCAGAC +
Preference number: 5 (lower is better)
Translates to: EIHPTEQSLLCFQFGPREMMNSS*LKTTPD
Trigger: GTCTGGTGTTGTTTTCAGCAAACTCGAATTCATCAT...CTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTGTCCTTCGAAACAGTTaGGATGATGAAAACATCTTT +
Preference number: 5 (lower is better)
Translates to: GEGGTSMTVPVKSIPPSSVLRNS*DDENIF
Trigger: AAAGATGTTTTCATCATCCAAACTGTTTCGAAGGAC...ACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CGCCGAGGCTGGAGACTTGGCCACGATTACTGCATTCCTGTAATCTGGGATCTCGTCCTTCGAAACAGTTaGGATGATGAAAACATCTTT +
Preference number: 5 (lower is better)
Translates to: RRGWRLGHDYCIPVIWDLVLRNS*DDENIF
Trigger: AAAGATGTTTTCATCATCCAAACTGTTTCGAAGGAC...GAGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp CATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCACAACAAGCCATGAGTaGCCATCACAAAGATCTTAT +
Preference number: 5 (lower is better)
Translates to: HPTEQSLLCFQFGPREFSTTSHE*PSQRSY
Trigger: ATAAGATCTTTGTGATGGCAACTCATGGCTTGTTGT...GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTACAACAAGCCATGAGTaGCCATCACAAAGATCTTAT +
Preference number: 5 (lower is better)
Translates to: GGTSMTVPVKSIPPSSHSTTSHE*PSQRSY
Trigger: ATAAGATCTTTGTGATGGCAACTCATGGCTTGTTGT...AGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGACAACAAGCCATGAGTaGCCATCACAAAGATCTTAT +
Preference number: 5 (lower is better)
Translates to: EIHPTEQSLLCFQFGPRETTSHE*PSQRSY
Trigger: ATAAGATCTTTGTGATGGCAACTCATGGCTTGTTGT...CTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp AGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCTCATGTGGAATTGTATaGGTGACCACCACCTCATCA +
Preference number: 5 (lower is better)
Translates to: SMTVPVKSIPPSSHSYVSSCGIV*VTTTSS
Trigger: TGATGAGGTGGTGGTCACCAATACAATTCCACATGA...GGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATTCATGTGGAATTGTATaGGTGACCACCACCTCATCA +
Preference number: 5 (lower is better)
Translates to: GTSMTVPVKSIPPSSHSYSCGIV*VTTTSS
Trigger: TGATGAGGTGGTGGTCACCAATACAATTCCACATGA...ATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAATTGGCTCAAGCAACTTaGGAAGAAGGCTTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: RAVTLMFPVWPSGVFLKELAQAT*EEGFVS
Trigger: GCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCCAA...TTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTCCCCTCACAGACTCTaGAATTTGTACTCTTGTTTT +
Preference number: 5 (lower is better)
Translates to: EIHPTEQSLLCFQFGPRESPHRL*NLYSCF
Trigger: AAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGGA...CTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp AGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCAAAAATTCCTCCAAAATaGATTCCTCTTCAGCGGTAC +
Preference number: 5 (lower is better)
Translates to: RGRNKHDGSCEIHPTEQSKIPPK*IPLQRY
Trigger: GTACCGCTGAAGAGGAATCAATTTTGGAGGAATTTT...TGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419071.6
ENST00000492129.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTAAAATTCCTCCAAAATaGATTCCTCTTCAGCGGTAC +
Preference number: 5 (lower is better)
Translates to: GGTSMTVPVKSIPPSSHSKIPPK*IPLQRY
Trigger: GTACCGCTGAAGAGGAATCAATTTTGGAGGAATTTT...AGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419071.6
ENST00000492129.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GTGAGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATATGATGAATTCGAGTTaGCTGAAAACAACACCAGAC +
Preference number: 5 (lower is better)
Translates to: VRLQGRGRNKHDGSCEIHMMNSS*LKTTPD
Trigger: GTCTGGTGTTGTTTTCAGCAAACTCGAATTCATCAT...ATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp TCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTGCTCTGCAATTTTCTTaGATAGCTCCATACATGATG +
Preference number: 5 (lower is better)
Translates to: SIPPSSHSYVSSLALGSFALQFS*IAPYMM
Trigger: CATCATGTATGGAGCTATCAAAGAAAATTGCAGAGC...AAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268835.7
CDS-3UTR CAA 90 bp AGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCGTCCTTCGAAACAGTTaGGATGATGAAAACATCTTT +
Preference number: 5 (lower is better)
Translates to: RLQGRGRNKHDGSCEIHPVLRNS*DDENIF
Trigger: AAAGATGTTTTCATCATCCAAACTGTTTCGAAGGAC...GGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGGTCCTTCGAAACAGTTaGGATGATGAAAACATCTTT +
Preference number: 5 (lower is better)
Translates to: EIHPTEQSLLCFQFGPREVLRNS*DDENIF
Trigger: AAAGATGTTTTCATCATCCAAACTGTTTCGAAGGAC...CTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CTTCTGGACTTCATGTGGAATTGTATTGGTGACCACCACCTCATCAATGGCAGAACGCCAATGATGCTCTaGGCACAAGAGGTCTTACAT +
Preference number: 5 (lower is better)
Translates to: LLDFMWNCIGDHHLINGRTPMML*AQEVLH
Trigger: ATGTAAGACCTCTTGTGCCAAGAGCATCATTGGCGT...TCTGCCATTGATGAGGTGGTGGTCACCAATACAATTCCACATGAAGTCCAGAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CAA 90 bp GAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGGGAGATGCTCTTAAATaGTCAACAGGAATATTGAAG +
Preference number: 5 (lower is better)
Translates to: EIHPTEQSLLCFQFGPREGDALK*STGILK
Trigger: CTTCAATATTCCTGTTGACAATTTAAGAGCATCTCC...CTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTGGAGATGCTCTTAAATaGTCAACAGGAATATTGAAG +
Preference number: 5 (lower is better)
Translates to: GGTSMTVPVKSIPPSSHSGDALK*STGILK
Trigger: CTTCAATATTCCTGTTGACAATTTAAGAGCATCTCC...AGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp AGGTTACAGGGGAGAGGGAGGAACAAGCATGACGGTTCCTGTGAAATCCATCCCGGAGATGCTCTTAAATaGTCAACAGGAATATTGAAG +
Preference number: 5 (lower is better)
Translates to: RLQGRGRNKHDGSCEIHPGDALK*STGILK
Trigger: CTTCAATATTCCTGTTGACAATTTAAGAGCATCTCC...GGGATGGATTTCACAGGAACCGTCATGCTTGTTCCTCCCTCTCCCCTGTAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTGTTAGACATGGACTCCCCATaGTGGATCCGACGGATCGCC +
Preference number: 5 (lower is better)
Translates to: QATLEEGFVSLQILFQVLDMDSP*WIRRIA
Trigger: GGCGATCCGTCGGATCCACAATGGGGAGTCCATGTC...TAACACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCCACAGACTCTTGAATTaGTACTCTTGTTTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: HPTEQSLLCFQFGPREFSHRLLN*YSCFLQ
Trigger: TTGCAGAAAACAAGAGTACAAATTCAAGAGTCTGTG...GGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS TCA 90 bp CAACAAAATTCCTCCTTCTACTTAAAGATGGCTGAAGTAGGAGTGTaGAGAGTTGGGTTTGCCTTCCAGCTACTAGGCCATGTGGACATC +
Preference number: 5 (lower is better)
Translates to: QQNSSFYLKMAEVGV*RVGFAFQLLGHVDI
Trigger: GATGTCCACATGGCCTAGTAGCTGGAAGGCAAACCCAACTCTTCACACTCCTACTTCAGCCATCTTTAAGTAGAAGGAGGAATTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422237.5
ENST00000575102.5
CDS-3UTR CAA 90 bp CATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGATGATGAATTCGAGTTaGCTGAAAACAACACCAGAC +
Preference number: 5 (lower is better)
Translates to: HDGSCEIHPTEQSLLCFQMMNSS*LKTTPD
Trigger: GTCTGGTGTTGTTTTCAGCAAACTCGAATTCATCAT...CTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp ATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTGGAGATGCTCTTAAATaGTCAACAGGAATATTGAAG +
Preference number: 5 (lower is better)
Translates to: IHPTEQSLLCFQFGPREFGDALK*STGILK
Trigger: CTTCAATATTCCTGTTGACAATTTAAGAGCATCTCC...AAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp GGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATACAACAAGCCATGAGTaGCCATCACAAAGATCTTAT +
Preference number: 5 (lower is better)
Translates to: GTSMTVPVKSIPPSSHSYTTSHE*PSQRSY
Trigger: ATAAGATCTTTGTGATGGCAACTCATGGCTTGTTGT...ATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CATCATGGAAGCCAGCAATTTAGAGACAATGGAGCCTCTTTTTCTCATCTTGCATCCACAGTTTTAATCTaGGGGCACTGGAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: HHGSQQFRDNGASFSHLASTVLI*GHWSFW
Trigger: CCAGAAGCTCCAGTGCCCCAAGATTAAAACTGTGGA...TGCAAGATGAGAAAAAGAGGCTCCATTGTCTCTAAATTGCTGGCTTCCATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CAA 90 bp ATGTCATTTACTGGACTTGACAGTATAATCTTTTCGGCTTTTCAATTGCAGGTAGACATGGACTCCCCATaGTGGATCCGACGGATCGCC +
Preference number: 5 (lower is better)
Translates to: MSFTGLDSIIFSAFQLQVDMDSP*WIRRIA
Trigger: GGCGATCCGTCGGATCCACAATGGGGAGTCCATGTC...TACCTGCAATTGAAAAGCCGAAAAGATTATACTGTCAAGTCCAGTAAATGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp TGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGTTTTCGGCTTTTCAATaGCAGGTATCATACAGATCA +
Preference number: 5 (lower is better)
Translates to: CEIHPTEQSLLCFQFGPRFSAFQ*QVSYRS
Trigger: TGATCTGTATGATACCTGCAATTGAAAAGCCGAAAA...CCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp AGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGTTTCCCCTCTGCAATTTTCTTaGATAGCTCCATACATGATG +
Preference number: 5 (lower is better)
Translates to: SMTVPVKSIPPSSHSYVSPLQFS*IAPYMM
Trigger: CATCATGTATGGAGCTATCAAAGAAAATTGCAGAGG...GGAAACATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419071.6
CDS-3UTR CAA 90 bp AGGAAAGTAGGGTATCACGCCAATGATGCTCTTGGCACAAGAGGTCTTACATGCATGATGAATTCGAGTTaGCTGAAAACAACACCAGAC +
Preference number: 5 (lower is better)
Translates to: RKVGYHANDALGTRGLTCMMNSS*LKTTPD
Trigger: GTCTGGTGTTGTTTTCAGCAAACTCGAATTCATCAT...GCATGTAAGACCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCTACTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573253.5
CDS-3UTR CAA 90 bp GGAACAAGCATGACGGTTCCTGTGAAATCCATCCCACCGAGCAGTCACTCTTATGGAGATGCTCTTAAATaGTCAACAGGAATATTGAAG +
Preference number: 5 (lower is better)
Translates to: GTSMTVPVKSIPPSSHSYGDALK*STGILK
Trigger: CTTCAATATTCCTGTTGACAATTTAAGAGCATCTCC...ATAAGAGTGACTGCTCGGTGGGATGGATTTCACAGGAACCGTCATGCTTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CGAGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAAACAACAAGCCATGAGTaGCCATCACAAAGATCTTAT +
Preference number: 5 (lower is better)
Translates to: RAVTLMFPVWPSGVFLKETTSHE*PSQRSY
Trigger: ATAAGATCTTTGTGATGGCAACTCATGGCTTGTTGT...TTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAAAACTCAGTTCATGTGGAATTGTATaGGTGACCACCACCTCATCA +
Preference number: 5 (lower is better)
Translates to: HSYVSSLALGSFPKGKLSSCGIV*VTTTSS
Trigger: TGATGAGGTGGTGGTCACCAATACAATTCCACATGA...ACTGAGTTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395656.6
ENST00000492129.5
CDS-3UTR CAA 90 bp ATGATCAGGAGCTCCATGATGGTGGTGTTCACGTCCTTCGAAACAGTTTGGATGAAAATTCCTCCAAAATaGATTCCTCTTCAGCGGTAC +
Preference number: 5 (lower is better)
Translates to: MIRSSMMVVFTSFETVWMKIPPK*IPLQRY
Trigger: GTACCGCTGAAGAGGAATCAATTTTGGAGGAATTTT...CATCCAAACTGTTTCGAAGGACGTGAACACCACCATCATGGAGCTCCTGATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573253.5
CDS-3UTR CAA 90 bp GGCTCAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTTTGGCTCAAGCAACTTaGGAAGAAGGCTTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: GSSNFGRRLCELTNLIPSLAQAT*EEGFVS
Trigger: GCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCCAA...ACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp AGGGTCTCTGCTGCAGCAAGAAAGCTGTCAACATCATCAATGATGTCATCCACGTTTTCGGCTTTTCAATaGCAGGTATCATACAGATCA +
Preference number: 5 (lower is better)
Translates to: RVSAAARKLSTSSMMSSTFSAFQ*QVSYRS
Trigger: TGATCTGTATGATACCTGCAATTGAAAAGCCGAAAA...CGTGGATGACATCATTGATGATGTTGACAGCTTTCTTGCTGCAGCAGAGACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492129.5
CDS-3UTR CAA 90 bp CTTGCTGTAAGGAAAGTAGGGTATCACGCCAATGATGCTCTTGGCACAAGAGGTCACAGACTCTTGAATTaGTACTCTTGTTTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: LAVRKVGYHANDALGTRGHRLLN*YSCFLQ
Trigger: TTGCAGAAAACAAGAGTACAAATTCAAGAGTCTGTG...ACCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCTACTTTCCTTACAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp AGGAAAGTAGGGTATCACGCCAATGATGCTCTTGGCACAAGAGGTCTTACATGCAGTCTGCAATTTTCTTaGATAGCTCCATACATGATG +
Preference number: 5 (lower is better)
Translates to: RKVGYHANDALGTRGLTCSLQFS*IAPYMM
Trigger: CATCATGTATGGAGCTATCAAAGAAAATTGCAGACT...GCATGTAAGACCTCTTGTGCCAAGAGCATCATTGGCGTGATACCCTACTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573253.5
CDS-3UTR CAA 90 bp ATGATGGTGGTGTTCACGTCCTTCGAAACAGTTTGGATGATGAAAACATCTTTTACGCCAATGATGCTCTaGGCACAAGAGGTCTTACAT +
Preference number: 5 (lower is better)
Translates to: MMVVFTSFETVWMMKTSFTPMML*AQEVLH
Trigger: ATGTAAGACCTCTTGTGCCAAGAGCATCATTGGCGT...AAAAGATGTTTTCATCATCCAAACTGTTTCGAAGGACGTGAACACCACCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573253.5
CDS-3UTR CAA 90 bp CTTGGCTCAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCATCCCCTCACAGACTCTaGAATTTGTACTCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: LGSSNFGRRLCELTNLIPSPHRL*NLYSCF
Trigger: GAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGGA...TGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268835.7
CDS-3UTR CAA 90 bp AATTTGTACTCTTGTTTCTCTGTTAGGTTCCTGGTAAACCTGCACTTTGCCCATTCCCCTCACAGACTCTaGAATTTGTACTCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: NLYSCFSVRFLVNLHFAHSPHRL*NLYSCF
Trigger: GAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGGA...ATGGGCAAAGTGCAGGTTTACCAGGAACCTAACAGAGAAACAAGAGTACAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571907.5
ENST00000573253.5
CDS-3UTR CAA 90 bp CATGATGGTGGTGTTCACGTCCTTCGAAACAGTTTGGATGATGAAAACATCTTTTCCCCTCACAGACTCTaGAATTTGTACTCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: HDGGVHVLRNSLDDENIFSPHRL*NLYSCF
Trigger: GAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGGA...AAAGATGTTTTCATCATCCAAACTGTTTCGAAGGACGTGAACACCACCATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573253.5
CDS-3UTR CAA 90 bp AGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAAAAGTCCTTCGAAACAGTTaGGATGATGAAAACATCTTT +
Preference number: 5 (lower is better)
Translates to: SSHSYVSSLALGSFPKGKVLRNS*DDENIF
Trigger: AAAGATGTTTTCATCATCCAAACTGTTTCGAAGGAC...TTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp AGCAGTCACTCTTATGTTTCCAGTTTGGCCCTCGGGAGTTTTCCTAAAGGAAAAGGAGATGCTCTTAAATaGTCAACAGGAATATTGAAG +
Preference number: 5 (lower is better)
Translates to: SSHSYVSSLALGSFPKGKGDALK*STGILK
Trigger: CTTCAATATTCCTGTTGACAATTTAAGAGCATCTCC...TTTTCCTTTAGGAAAACTCCCGAGGGCCAAACTGGAAACATAAGAGTGACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CAAGCAACTTTGGAAGAAGGCTTTGTGAGCTTACAAATCTTATTCCAAGTGTTATTGGCTCAAGCAACTTaGGAAGAAGGCTTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: QATLEEGFVSLQILFQVLLAQAT*EEGFVS
Trigger: GCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCCAA...TAACACTTGGAATAAGATTTGTAAGCTCACAAAGCCTTCTTCCAAAGTTGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CTCACAAACACCCAAACCGACATAAAAAGTTGGTCTATCTTCTTAGGAATCAATTTGGCTCAAGCAACTTaGGAAGAAGGCTTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: LTNTQTDIKSWSIFLGINLAQAT*EEGFVS
Trigger: GCTCACAAAGCCTTCTTCCAAAGTTGCTTGAGCCAA...ATTGATTCCTAAGAAGATAGACCAACTTTTTATGTCGGTTTGGGTGTTTGTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp AATTTGTACTCTTGTTTCTCTGTTAGGTTCCTGGTAAACCTGCACTTTGCCCATATGATGAATTCGAGTTaGCTGAAAACAACACCAGAC +
Preference number: 5 (lower is better)
Translates to: NLYSCFSVRFLVNLHFAHMMNSS*LKTTPD
Trigger: GTCTGGTGTTGTTTTCAGCAAACTCGAATTCATCAT...ATGGGCAAAGTGCAGGTTTACCAGGAACCTAACAGAGAAACAAGAGTACAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571907.5
ENST00000573253.5
CDS-3UTR CAA 90 bp CATCATGGAAGCCAGCAATTTAGAGACAATGGAGCCTCTTTTTCTCATCTTGCAGTCCTTCGAAACAGTTaGGATGATGAAAACATCTTT +
Preference number: 5 (lower is better)
Translates to: HHGSQQFRDNGASFSHLAVLRNS*DDENIF
Trigger: AAAGATGTTTTCATCATCCAAACTGTTTCGAAGGAC...TGCAAGATGAGAAAAAGAGGCTCCATTGTCTCTAAATTGCTGGCTTCCATGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp CTCACAAACACCCAAACCGACATAAAAAGTTGGTCTATCTTCTTAGGAATCAATTCATGTGGAATTGTATaGGTGACCACCACCTCATCA +
Preference number: 5 (lower is better)
Translates to: LTNTQTDIKSWSIFLGINSCGIV*VTTTSS
Trigger: TGATGAGGTGGTGGTCACCAATACAATTCCACATGA...ATTGATTCCTAAGAAGATAGACCAACTTTTTATGTCGGTTTGGGTGTTTGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000419071.6
ENST00000492129.5
ENST00000536323.5
ENST00000574451.5
ENST00000610773.4
CDS-3UTR CAA 90 bp AATTTGTACTCTTGTTTCTCTGTTAGGTTCCTGGTAAACCTGCACTTTGCCCATAGTCTGCAATTTTCTTaGATAGCTCCATACATGATG +
Preference number: 5 (lower is better)
Translates to: NLYSCFSVRFLVNLHFAHSLQFS*IAPYMM
Trigger: CATCATGTATGGAGCTATCAAAGAAAATTGCAGACT...ATGGGCAAAGTGCAGGTTTACCAGGAACCTAACAGAGAAACAAGAGTACAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571907.5
ENST00000573253.5
CDS-3UTR CAA 90 bp ATGATGGTGGTGTTCACGTCCTTCGAAACAGTTTGGATGATGAAAACATCTTTTGTCCTTCGAAACAGTTaGGATGATGAAAACATCTTT +
Preference number: 5 (lower is better)
Translates to: MMVVFTSFETVWMMKTSFVLRNS*DDENIF
Trigger: AAAGATGTTTTCATCATCCAAACTGTTTCGAAGGAC...AAAAGATGTTTTCATCATCCAAACTGTTTCGAAGGACGTGAACACCACCATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573253.5
CDS-3UTR CAA 90 bp AACATGAAATACGAAGAGAGAGACAAAATGTGGACTATCCATGTAACACAGCATACAACAAGCCATGAGTaGCCATCACAAAGATCTTAT +
Preference number: 5 (lower is better)
Translates to: NMKYEERDKMWTIHVTQHTTSHE*PSQRSY
Trigger: ATAAGATCTTTGTGATGGCAACTCATGGCTTGTTGT...ATGCTGTGTTACATGGATAGTCCACATTTTGTCTCTCTCTTCGTATTTCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460724.1
CDS TCA 90 bp AAAATCAATCAGGATGGTTTCTCTGTGTCATTTTGTTTCATGCACTaGCAGAGAGGAATTCTAAAGCAACTTGATCCTGATTGTACGATA +
Preference number: 5 (lower is better)
Translates to: KINQDGFSVSFCFMH*QRGILKQLDPDCTI
Trigger: TATCGTACAATCAGGATCAAGTTGCTTTAGAATTCCTCTCTGTCAGTGCATGAAACAAAATGACACAGAGAAACCATCCTGATTGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575337.2
CDS-3UTR CAA 90 bp ATGTCATTTACTGGACTTGACAGTATAATCTTTTCGGCTTTTCAATTGCAGGTAATGATGAATTCGAGTTaGCTGAAAACAACACCAGAC +
Preference number: 5 (lower is better)
Translates to: MSFTGLDSIIFSAFQLQVMMNSS*LKTTPD
Trigger: GTCTGGTGTTGTTTTCAGCAAACTCGAATTCATCAT...TACCTGCAATTGAAAAGCCGAAAAGATTATACTGTCAAGTCCAGTAAATGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp ATGTCATTTACTGGACTTGACAGTATAATCTTTTCGGCTTTTCAATTGCAGGTAACAACAAGCCATGAGTaGCCATCACAAAGATCTTAT +
Preference number: 5 (lower is better)
Translates to: MSFTGLDSIIFSAFQLQVTTSHE*PSQRSY
Trigger: ATAAGATCTTTGTGATGGCAACTCATGGCTTGTTGT...TACCTGCAATTGAAAAGCCGAAAAGATTATACTGTCAAGTCCAGTAAATGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268835.7
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CTCACAAACACCCAAACCGACATAAAAAGTTGGTCTATCTTCTTAGGAATCAATCACAGACTCTTGAATTaGTACTCTTGTTTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: LTNTQTDIKSWSIFLGINHRLLN*YSCFLQ
Trigger: TTGCAGAAAACAAGAGTACAAATTCAAGAGTCTGTG...ATTGATTCCTAAGAAGATAGACCAACTTTTTATGTCGGTTTGGGTGTTTGTGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395656.6
ENST00000492129.5
ENST00000536323.5
ENST00000610773.4
CDS-3UTR CAA 90 bp CTGGGATCTCTTCTTGAATATACTGTAATAAGAAGGGAGATGCTCTTAAATTGTTCCCCTCACAGACTCTaGAATTTGTACTCTTGTTTT +
Preference number: 5 (lower is better)
Translates to: LGSLLEYTVIRREMLLNCSPHRL*NLYSCF
Trigger: AAAACAAGAGTACAAATTCAAGAGTCTGTGAGGGGA...ACAATTTAAGAGCATCTCCCTTCTTATTACAGTATATTCAAGAAGAGATCCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS-3UTR CAA 90 bp AACATGAAATACGAAGAGAGAGACAAAATGTGGACTATCCATGTAACACAGCATCTTGAAAATATTATGTaGAGTGAAGACAGCCAGACA +
Preference number: 5 (lower is better)
Translates to: NMKYEERDKMWTIHVTQHLENIM*SEDSQT
Trigger: TGTCTGGCTGTCTTCACTCAACATAATATTTTCAAG...ATGCTGTGTTACATGGATAGTCCACATTTTGTCTCTCTCTTCGTATTTCATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460724.1
CDS-3UTR CAA 90 bp CTGGGATCTCTTCTTGAATATACTGTAATAAGAAGGGAGATGCTCTTAAATTGTCACAGACTCTTGAATTaGTACTCTTGTTTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: LGSLLEYTVIRREMLLNCHRLLN*YSCFLQ
Trigger: TTGCAGAAAACAAGAGTACAAATTCAAGAGTCTGTG...ACAATTTAAGAGCATCTCCCTTCTTATTACAGTATATTCAAGAAGAGATCCCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395656.6
ENST00000487101.5
ENST00000492129.5
CDS GCA 72 bp CCTGGCGGCCTCTCTAGGAGCAAAATGGCGACTCCATaGACAAGATTGGCGTCCGCGGTGACTGCGAGGCCG +
Preference number: 6 (lower is better)
Translates to: PGGLSRSKMATP*TRLASAVTARP
Trigger: CGGCCTCGCAGTCACCGCGGACGCCAATCTTGTGCATGGAGTCGCCATTTTGCTCCTAGAGAGGCCGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419284.6
ENST00000536323.5
ENST00000571907.5
CDS CCA 72 bp AGCGGTACCTCGGCTGGGCTCACGTCCCTTCTGCGCTaGCATCTAACTCCGGTCACAACCCCCACCTCTCTG +
Preference number: 6 (lower is better)
Translates to: SGTSAGLTSLLR*HLTPVTTPTSL
Trigger: CAGAGAGGTGGGGGTTGTGACCGGAGTTAGATGCCAGCGCAGAAGGGACGTGAGCCCAGCCGAGGTACCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432893.6
ENST00000573432.5
ENST00000610773.4
CDS CAA 72 bp CTCTCTAGGAGCAAAATGGCGACTCCATGCACAAGATaGGCGTCCGCGGTGACTGCGAGGCCGGTGGGCGGG +
Preference number: 6 (lower is better)
Translates to: LSRSKMATPCTR*ASAVTARPVGG
Trigger: CCCGCCCACCGGCCTCGCAGTCACCGCGGACGCCAATCTTGTGCATGGAGTCGCCATTTTGCTCCTAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419284.6
ENST00000536323.5
ENST00000571907.5
CDS GCA 72 bp TTGTGCAGACGGCATGGCCCCATGTCCCCATCACCGTaGCCCATGGCAGCCCTCCAGTACTTTCACACGAGC +
Preference number: 6 (lower is better)
Translates to: LCRRHGPMSPSP*PMAALQYFHTS
Trigger: GCTCGTGTGAAAGTACTGGAGGGCTGCCATGGGGCACGGTGATGGGGACATGGGGCCATGCCGTCTGCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466106.1
CDS CCA 72 bp AATTCCTCCTCGGCTGGGCTCACGTCCCTTCTGCGCTaGCATCTAACTCCGGTCACAACCCCCACCTCTCTG +
Preference number: 6 (lower is better)
Translates to: NSSSAGLTSLLR*HLTPVTTPTSL
Trigger: CAGAGAGGTGGGGGTTGTGACCGGAGTTAGATGCCAGCGCAGAAGGGACGTGAGCCCAGCCGAGGAGGAATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414602.5
CDS CCA 72 bp GACTGGGCGACAGAGGGAGACCCTCTTCGCCGAGGCTaGAGACTTGGCCACGATTACTGCATTCCTGTAATC +
Preference number: 6 (lower is better)
Translates to: DWATEGDPLRRG*RLGHDYCIPVI
Trigger: GATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGGGTCTCCCTCTGTCGCCCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575337.2
CDS GCA 72 bp TGGCAGCCCTCCAGTACTTTCACACGAGCCTCTTCCTaGACAGCACCTGCCACTATTGGAGCTATCTCCCAC +
Preference number: 6 (lower is better)
Translates to: WQPSSTFTRASS*TAPATIGAISH
Trigger: GTGGGAGATAGCTCCAATAGTGGCAGGTGCTGTGCAGGAAGAGGCTCGTGTGAAAGTACTGGAGGGCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466106.1
CDS GCA 72 bp CAGTACTTTCACACGAGCCTCTTCCTGCACAGCACCTaGCACTATTGGAGCTATCTCCCACCACACTCCAGG +
Preference number: 6 (lower is better)
Translates to: QYFHTSLFLHST*HYWSYLPPHSR
Trigger: CCTGGAGTGTGGTGGGAGATAGCTCCAATAGTGGCAGGTGCTGTGCAGGAAGAGGCTCGTGTGAAAGTACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466106.1
CDS CCA 72 bp ATACCAAAATTGATTCCTCTTCAGCGGTACCTCGGCTaGGCTCACGTCCCTTCTGCGCTGGCATCTAACTCC +
Preference number: 6 (lower is better)
Translates to: IPKLIPLQRYLG*AHVPSALASNS
Trigger: GGAGTTAGATGCCAGCGCAGAAGGGACGTGAGCCCAGCCGAGGTACCGCTGAAGAGGAATCAATTTTGGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432893.6
ENST00000570450.5
CDS CCA 72 bp TCATCAAAATTGATTCCTCTTCAGCGGTACCTCGGCTaGGCTCACGTCCCTTCTGCGCTGGCATCTAACTCC +
Preference number: 6 (lower is better)
Translates to: SSKLIPLQRYLG*AHVPSALASNS
Trigger: GGAGTTAGATGCCAGCGCAGAAGGGACGTGAGCCCAGCCGAGGTACCGCTGAAGAGGAATCAATTTTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574522.5
CDS GCA 72 bp CCTCTTCGCCGAGGCTGGAGACTTGGCCACGATTACTaGATTCCTGTAATCTGGGATCAGCTTTGCACATCA +
Preference number: 6 (lower is better)
Translates to: PLRRGWRLGHDY*IPVIWDQLCTS
Trigger: TGATGTGCAAAGCTGATCCCAGATTACAGGAATGCAGTAATCGTGGCCAAGTCTCCAGCCTCGGCGAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455992.6
CDS GCA 72 bp ACCACACTCCAGGCTCCCAGGGGTAGCACTGTTTTCTaGACCATAACTGGCCAACATTGTGCTGTCACAATG +
Preference number: 6 (lower is better)
Translates to: TTLQAPRGSTVF*TITGQHCAVTM
Trigger: CATTGTGACAGCACAATGTTGGCCAGTTATGGTGCAGAAAACAGTGCTACCCCTGGGAGCCTGGAGTGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466106.1
CDS CAA 72 bp CTTCCAGCTACTAGGCCATGTGGACATCACTTGTCCTaGCTGGGCCTCAGCCTTTACCTTCCAGACAAGAGA +
Preference number: 6 (lower is better)
Translates to: LPATRPCGHHLS*LGLSLYLPDKR
Trigger: TCTCTTGTCTGGAAGGTAAAGGCTGAGGCCCAGCAAGGACAAGTGATGTCCACATGGCCTAGTAGCTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422237.5
ENST00000575102.5
CDS GCA 72 bp TTCCAGCTACTAGGCCATGTGGACATCACTTGTCCTTaGTGGGCCTCAGCCTTTACCTTCCAGACAAGAGAT +
Preference number: 6 (lower is better)
Translates to: FQLLGHVDITCP*WASAFTFQTRD
Trigger: ATCTCTTGTCTGGAAGGTAAAGGCTGAGGCCCAGCAAGGACAAGTGATGTCCACATGGCCTAGTAGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422237.5
ENST00000575102.5
CDS CAA 72 bp AGACCCATGAGCCCAGTGATTATCTGCATACCAAAATaGATTCCTCTTCAGCGGTACCTCGGCTGGGCTCAC +
Preference number: 6 (lower is better)
Translates to: RPMSPVIICIPK*IPLQRYLGWAH
Trigger: GTGAGCCCAGCCGAGGTACCGCTGAAGAGGAATCAATTTTGGTATGCAGATAATCACTGGGCTCATGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432893.6
ENST00000570450.5
CDS CAA 72 bp GGGCACTGGAGCTTCTGGACTTCATGTGGAATTGTATaGGTGACCACCACCACGATGATGGCAATCCTTCCT +
Preference number: 6 (lower is better)
Translates to: GHWSFWTSCGIV*VTTTTMMAILP
Trigger: AGGAAGGATTGCCATCATCGTGGTGGTGGTCACCAATACAATTCCACATGAAGTCCAGAAGCTCCAGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542013.5
CDS CAA 90 bp TGGGTTTGCCTTCCAGCTACTAGGCCATGTGGACATCACTTGTCCTaGCTGGGCCTCAGCCTTTACCTTCCAGACAAGAGATATAACCTT +
Preference number: 6 (lower is better)
Translates to: WVCLPATRPCGHHLS*LGLSLYLPDKRYNL
Trigger: AAGGTTATATCTCTTGTCTGGAAGGTAAAGGCTGAGGCCCAGCAAGGACAAGTGATGTCCACATGGCCTAGTAGCTGGAAGGCAAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422237.5
CDS CAA 90 bp TGGGTTTGCCTTCCAGCTACTAGGCCATGTGGACATCACTTGTCCTaGCTGGGCCTCAGCCTTTACCTTCCAGACAAGAGATATAACTCA +
Preference number: 6 (lower is better)
Translates to: WVCLPATRPCGHHLS*LGLSLYLPDKRYNS
Trigger: TGAGTTATATCTCTTGTCTGGAAGGTAAAGGCTGAGGCCCAGCAAGGACAAGTGATGTCCACATGGCCTAGTAGCTGGAAGGCAAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575102.5
CDS CCA 72 bp CAGCTACTAGGCCATGTGGACATCACTTGTCCTTGCTaGGCCTCAGCCTTTACCTTCCAGACAAGAGATATA +
Preference number: 6 (lower is better)
Translates to: QLLGHVDITCPC*ASAFTFQTRDI
Trigger: TATATCTCTTGTCTGGAAGGTAAAGGCTGAGGCCCAGCAAGGACAAGTGATGTCCACATGGCCTAGTAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422237.5
ENST00000575102.5
CDS CAA 90 bp TTGGACAAGTCATTTCAACCCTCTGAGCTTGTTTCCTCATCAAAATaGATTCCTCTTCAGCGGTACCTCGGCTGGGCTCACGTCCCTTCT +
Preference number: 6 (lower is better)
Translates to: LDKSFQPSELVSSSK*IPLQRYLGWAHVPS
Trigger: AGAAGGGACGTGAGCCCAGCCGAGGTACCGCTGAAGAGGAATCAATTTTGATGAGGAAACAAGCTCAGAGGGTTGAAATGACTTGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574522.5
CDS CCA 72 bp CTGACAACAAAATTCCTCCTGGGTTCAAGCCTCCACTaGCCTGTAACCTTGGACAAGTCATTTCAACCCTCT +
Preference number: 6 (lower is better)
Translates to: LTTKFLLGSSLH*PVTLDKSFQPS
Trigger: AGAGGGTTGAAATGACTTGTCCAAGGTTACAGGCCAGTGGAGGCTTGAACCCAGGAGGAATTTTGTTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487101.5
ENST00000574522.5
CDS CCA 72 bp TTTAATCTTGGGGCACTGGAGCTTCTGGACTTCATGTaGAATTGTATTGGTGACCACCACCACGATGATGGC +
Preference number: 6 (lower is better)
Translates to: FNLGALELLDFM*NCIGDHHHDDG
Trigger: GCCATCATCGTGGTGGTGGTCACCAATACAATTCCACATGAAGTCCAGAAGCTCCAGTGCCCCAAGATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542013.5
CDS CAA 72 bp TCATTTCAACCCTCTGAGCTTGTTTCCTCATCAAAATaGATTCCTCTTCAGCGGTACCTCGGCTGGGCTCAC +
Preference number: 6 (lower is better)
Translates to: SFQPSELVSSSK*IPLQRYLGWAH
Trigger: GTGAGCCCAGCCGAGGTACCGCTGAAGAGGAATCAATTTTGATGAGGAAACAAGCTCAGAGGGTTGAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487101.5
ENST00000574522.5
CDS CAA 90 bp CCTTGCTGGGCCTCAGCCTTTACCTTCCAGACAAGAGATATAACCTaGGTAAAAAGATTTCCCCATCAGAATTTAAGGTCCAGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: PCWASAFTFQTRDIT*VKRFPHQNLRSRQQ
Trigger: CTGCTGCCTGGACCTTAAATTCTGATGGGGAAATCTTTTTACCAAGGTTATATCTCTTGTCTGGAAGGTAAAGGCTGAGGCCCAGCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422237.5
CDS CAA 72 bp TGCCCATCTCCACCCCTAGCCGCTCTGCAATTTTCTTaGATAGCTCCATACATGATGAATTCGAGTTTGCTG +
Preference number: 6 (lower is better)
Translates to: CPSPPLAALQFS*IAPYMMNSSLL
Trigger: CAGCAAACTCGAATTCATCATGTATGGAGCTATCAAAGAAAATTGCAGAGCGGCTAGGGGTGGAGATGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000268835.7
ENST00000412418.5
ENST00000414602.5
ENST00000419284.6
ENST00000422237.5
ENST00000432893.6
ENST00000441887.5
ENST00000455992.6
ENST00000542013.5
ENST00000570450.5
ENST00000574522.5
ENST00000576355.5
CDS TCA 72 bp AAGCCTCTAAGCAGCAAAAATAGCTCGGTCTCAGCATaGTTTGTAGTAGTTAGTCCTATGCAACAGTGGGCT +
Preference number: 6 (lower is better)
Translates to: KPLSSKNSSVSA*FVVVSPMQQWA
Trigger: AGCCCACTGTTGCATAGGACTAACTACTACAAATCATGCTGAGACCGAGCTATTTTTGCTGCTTAGAGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419284.6
ENST00000570450.5
ENST00000575102.5
CDS TCA 72 bp TCTCTGCTGCAGCAAGAAAGCTGTCAACATCATCAATaGTGTCATCCTGCCAAAGCACAGATGGAAAAGAAT +
Preference number: 6 (lower is better)
Translates to: SLLQQESCQHHQ*CHPAKAQMEKN
Trigger: ATTCTTTTCCATCTGTGCTTTGGCAGGATGACATCATTGATGATGTTGACAGCTTTCTTGCTGCAGCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466106.1
CDS CAA 72 bp GCCTCAGCCTTTACCTTCCAGACAAGAGATATAACCTaGGTAAAAAGATTTCCCCATCAGAATTTAAGGTCC +
Preference number: 6 (lower is better)
Translates to: ASAFTFQTRDIT*VKRFPHQNLRS
Trigger: GGACCTTAAATTCTGATGGGGAAATCTTTTTACCAAGGTTATATCTCTTGTCTGGAAGGTAAAGGCTGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422237.5
CDS CAA 90 bp GCTCTGCAATTTTCTTTGATAGCTCCATACATGATGAATTCGAGTTaGCTGAAAACAACACCAGACCACCTTTGGTTATGTTCATCTTGG +
Preference number: 6 (lower is better)
Translates to: ALQFSLIAPYMMNSS*LKTTPDHLWLCSSW
Trigger: CCAAGATGAACATAACCAAAGGTGGTCTGGTGTTGTTTTCAGCAAACTCGAATTCATCATGTATGGAGCTATCAAAGAAAATTGCAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000268835.7
ENST00000412418.5
ENST00000414602.5
ENST00000419284.6
ENST00000422237.5
ENST00000432893.6
ENST00000441887.5
ENST00000455992.6
ENST00000542013.5
ENST00000570450.5
ENST00000574522.5
ENST00000576355.5
CDS CAA 90 bp CCTCTGCAATTTTCTTTGATAGCTCCATACATGATGAATTCGAGTTaGCTGAAAACAACACCAGACCACCTTTGGTTATGTTCATCTTGG +
Preference number: 6 (lower is better)
Translates to: PLQFSLIAPYMMNSS*LKTTPDHLWLCSSW
Trigger: CCAAGATGAACATAACCAAAGGTGGTCTGGTGTTGTTTTCAGCAAACTCGAATTCATCATGTATGGAGCTATCAAAGAAAATTGCAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419071.6
CDS TCA 72 bp CAGGATGGTTTCTCTGTGTCATTTTGTTTCATGCACTaGCAGAGAGGAATTCTAAAGCAACTTGATCCTGAT +
Preference number: 6 (lower is better)
Translates to: QDGFSVSFCFMH*QRGILKQLDPD
Trigger: ATCAGGATCAAGTTGCTTTAGAATTCCTCTCTGTCAGTGCATGAAACAAAATGACACAGAGAAACCATCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575337.2
CDS CAA 90 bp AGTCTGCAATTTTCTTTGATAGCTCCATACATGATGAATTCGAGTTaGCTGAAAACAACACCAGACCACCTTTGGTTATGTTCATCTTGG +
Preference number: 6 (lower is better)
Translates to: SLQFSLIAPYMMNSS*LKTTPDHLWLCSSW
Trigger: CCAAGATGAACATAACCAAAGGTGGTCTGGTGTTGTTTTCAGCAAACTCGAATTCATCATGTATGGAGCTATCAAAGAAAATTGCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571907.5
ENST00000573253.5
ENST00000628609.1
CDS CAA 90 bp TTTCTGCAATTTTCTTTGATAGCTCCATACATGATGAATTCGAGTTaGCTGAAAACAACACCAGACCACCTTTGGTTATGTTCATCTTGG +
Preference number: 6 (lower is better)
Translates to: FLQFSLIAPYMMNSS*LKTTPDHLWLCSSW
Trigger: CCAAGATGAACATAACCAAAGGTGGTCTGGTGTTGTTTTCAGCAAACTCGAATTCATCATGTATGGAGCTATCAAAGAAAATTGCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395656.6
ENST00000478622.6
ENST00000487101.5
ENST00000492129.5
ENST00000536323.5
ENST00000573432.5
ENST00000575228.5
ENST00000610773.4
CDS CAA 72 bp TTTTCTTTGATAGCTCCATACATGATGAATTCGAGTTaGCTGAAAACAACACCAGACCACCTTTGGTTATGT +
Preference number: 6 (lower is better)
Translates to: FSLIAPYMMNSS*LKTTPDHLWLC
Trigger: ACATAACCAAAGGTGGTCTGGTGTTGTTTTCAGCAAACTCGAATTCATCATGTATGGAGCTATCAAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 24 transcripts:
ENST00000268835.7
ENST00000395656.6
ENST00000412418.5
ENST00000414602.5
ENST00000419071.6
ENST00000419284.6
ENST00000422237.5
ENST00000432893.6
ENST00000441887.5
ENST00000455992.6
ENST00000478622.6
ENST00000487101.5
ENST00000492129.5
ENST00000536323.5
ENST00000542013.5
ENST00000570450.5
ENST00000571907.5
ENST00000573253.5
ENST00000573432.5
ENST00000574522.5
ENST00000575228.5
ENST00000576355.5
ENST00000610773.4
ENST00000628609.1