RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRPH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000112619

Ensembl transcript IDs: ENST00000230381.7

Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCTaGCACTTTAGGGGTGGTGTGGTGCTGGGACACGCCAACAGCCTG +
Preference number: 1 (lower is better)
Translates to: AAYPTASTDEPQEIT*HFRGGVVLGHANSL
Trigger: CAGGCTGTTGGCGTGTCCCAGCACCACACCACCCCTAAAGTGCCAGGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR TCA 90 bp CCTGGCACTTTAGGGGTGGTGTGGTGCTGGGACACGCCAACAGCCTaGCTTCCTCAACCCGTGGTTCACTCCAGACTCAGTGACCGAGGG +
Preference number: 1 (lower is better)
Translates to: PGTLGVVWCWDTPTA*LPQPVVHSRLSDRG
Trigger: CCCTCGGTCACTGAGTCTGGAGTGAACCACGGGTTGAGGAAGTCAGGCTGTTGGCGTGTCCCAGCACCACACCACCCCTAAAGTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CCA 90 bp TGGCCACCTGTGTGGGTGTCCCTGGGCCCACCAAGAGCTGAGGCCTaGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCTCCTCTTCC +
Preference number: 1 (lower is better)
Translates to: WPPVWVSLGPPRAEA*SPKGGLMSDCCSSS
Trigger: GGAAGAGGAGCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGCTCTTGGTGGGCCCAGGGACACCCACACAGGTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CCA 90 bp AGTGGCCATAGGGTGGGACTAAATCCGTGTGAGAAAGATGGGTCCTaGGCTAGTCGTCTGAGACAGCCCCCGAGTCACCAGGAGGGCATA +
Preference number: 1 (lower is better)
Translates to: SGHRVGLNPCEKDGS*ASRLRQPPSHQEGI
Trigger: TATGCCCTCCTGGTGACTCGGGGGCTGTCTCAGACGACTAGCCCAGGACCCATCTTTCTCACACGGATTTAGTCCCACCCTATGGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR TCA 90 bp GCCAACAGCCTGACTTCCTCAACCCGTGGTTCACTCCAGACTCAGTaGCCGAGGGCATGTGAATGGGACACAAAAGCAGGCCTTTCACTG +
Preference number: 1 (lower is better)
Translates to: ANSLTSSTRGSLQTQ*PRACEWDTKAGLSL
Trigger: CAGTGAAAGGCCTGCTTTTGTGTCCCATTCACATGCCCTCGGTCACTGAGTCTGGAGTGAACCACGGGTTGAGGAAGTCAGGCTGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CCA 90 bp GTCTCCAGCCAGGTAGGAACGAGCTCTCTTGAATGTTCATCCAACTaGAGGAATTATGCTGGGCCCTGCCTTGGTCTGGTCACCAGGGCT +
Preference number: 1 (lower is better)
Translates to: VSSQVGTSSLECSSN*RNYAGPCLGLVTRA
Trigger: AGCCCTGGTGACCAGACCAAGGCAGGGCCCAGCATAATTCCTCCAGTTGGATGAACATTCAAGAGAGCTCGTTCCTACCTGGCTGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR TCA 90 bp TTCCTCAACCCGTGGTTCACTCCAGACTCAGTGACCGAGGGCATGTaGATGGGACACAAAAGCAGGCCTTTCACTGTGTTTTTGGTGGGG +
Preference number: 1 (lower is better)
Translates to: FLNPWFTPDSVTEGM*MGHKSRPFTVFLVG
Trigger: CCCCACCAAAAACACAGTGAAAGGCCTGCTTTTGTGTCCCATTCACATGCCCTCGGTCACTGAGTCTGGAGTGAACCACGGGTTGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CCA 90 bp GGAAGAAACGGAAGAAGCTCCCAGAGGATTCCTTGCCCTTTGCTGTaGACAATTAGTGTTGTCCATGGGGCTGTGATGGCCACCTGTGTG +
Preference number: 1 (lower is better)
Translates to: GRNGRSSQRIPCPLL*TISVVHGAVMATCV
Trigger: CACACAGGTGGCCATCACAGCCCCATGGACAACACTAATTGTCCACAGCAAAGGGCAAGGAATCCTCTGGGAGCTTCTTCCGTTTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR GCA 90 bp GACCAACGTCTGACAGGGTGTCCAAACATCTTGGATCTGGTCTTCTaGTTGGGGGAATTAAGCCCAGAACATACCCCAGCAGCACCAGAA +
Preference number: 1 (lower is better)
Translates to: DQRLTGCPNILDLVF*LGELSPEHTPAAPE
Trigger: TTCTGGTGCTGCTGGGGTATGTTCTGGGCTTAATTCCCCCAAGCAGAAGACCAGATCCAAGATGTTTGGACACCCTGTCAGACGTTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CCA 90 bp AATGTTCATCCAACTGGAGGAATTATGCTGGGCCCTGCCTTGGTCTaGTCACCAGGGCTTGGGAAGTCAGCAAAATCATTCTCTCCTTCC +
Preference number: 1 (lower is better)
Translates to: NVHPTGGIMLGPALV*SPGLGKSAKSFSPS
Trigger: GGAAGGAGAGAATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAGGCAGGGCCCAGCATAATTCCTCCAGTTGGATGAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR GCA 90 bp AGCTCTCTTGAATGTTCATCCAACTGGAGGAATTATGCTGGGCCCTaGCTTGGTCTGGTCACCAGGGCTTGGGAAGTCAGCAAAATCATT +
Preference number: 1 (lower is better)
Translates to: SSLECSSNWRNYAGP*LGLVTRAWEVSKII
Trigger: AATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAGGCAGGGCCCAGCATAATTCCTCCAGTTGGATGAACATTCAAGAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CCA 90 bp CTCTGTAAGATGGTGCCCTCCTTGGGAGATTCAGACTTTCGGAGTTaGATGAGGGGGAGATCCACGTTTCTTGGAGTGCACTATTTCTCA +
Preference number: 1 (lower is better)
Translates to: LCKMVPSLGDSDFRS*MRGRSTFLGVHYFS
Trigger: TGAGAAATAGTGCACTCCAAGAAACGTGGATCTCCCCCTCATCCAACTCCGAAAGTCTGAATCTCCCAAGGAGGGCACCATCTTACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR TCA 90 bp AGCAGGGCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCCTAGGGCAGCGGGCCTaGAGGGAGCTTCACTCACAT +
Preference number: 2 (lower is better)
Translates to: SRAAAYPTASTDEPQEITLGQRA*RELHSH
Trigger: ATGTGAGTGAAGCTCCCTTCAGGCCCGCTGCCCTAG...GGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR TCA 90 bp GCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCTGGCACGACACGCCAACAGCCTaGCTTCCTCAACCCGTGGTT +
Preference number: 2 (lower is better)
Translates to: AAAYPTASTDEPQEITWHDTPTA*LPQPVV
Trigger: AACCACGGGTTGAGGAAGTCAGGCTGTTGGCGTGTC...GTGCCAGGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR TCA 90 bp GCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCTGGCACGTGACCGAGGGCATGTaGATGGGACACAAAAGCAGG +
Preference number: 2 (lower is better)
Translates to: AAAYPTASTDEPQEITWHVTEGM*MGHKSR
Trigger: CCTGCTTTTGTGTCCCATTCACATGCCCTCGGTCAC...GTGCCAGGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR GCA 90 bp CTGTGTGGGTGTCCCTGGGCCCACCAAGAGCTGAGGCCTGGTCTCCAAAGGGTGGTCTCTGTAAGATGGTaGCCTCCTTGGGAGATTCAG +
Preference number: 2 (lower is better)
Translates to: LCGCPWAHQELRPGLQRVVSVRW*PPWEIQ
Trigger: CTGAATCTCCCAAGGAGGGCACCATCTTACAGAGAC...CACCCTTTGGAGACCAGGCCTCAGCTCTTGGTGGGCCCAGGGACACCCACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR CCA 90 bp CCTTGGTCTGGTCACCAGGGCTTGGGAAGTCAGCAAAATCATTCTCTCCTTCCCCTGTGTGGGTGTCCCTaGGCCCACCAAGAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: PWSGHQGLGSQQNHSLLPLCGCP*AHQELR
Trigger: CCTCAGCTCTTGGTGGGCCCAGGGACACCCACACAG...GGGAAGGAGAGAATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR TCA 90 bp GCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCTCCTCTTCCCACTGCTTCCACCGATaGGCCACAGGAGATCACCTG +
Preference number: 2 (lower is better)
Translates to: AEAWSPKGGLMSDCCSSSHCFHR*ATGDHL
Trigger: CAGGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTG...GGAAGAGGAGCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR CCA 90 bp CTTGGTCTGGTCACCAGGGCTTGGGAAGTCAGCAAAATCATTCTCTCCTTCCCCCCAAGAGCTGAGGCCTaGTCTCCAAAGGGTGGACTC +
Preference number: 2 (lower is better)
Translates to: LGLVTRAWEVSKIILSFPPRAEA*SPKGGL
Trigger: GAGTCCACCCTTTGGAGACCAGGCCTCAGCTCTTGG...GGGGAAGGAGAGAATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR TCA 90 bp CTTGGTCTGGTCACCAGGGCTTGGGAAGTCAGCAAAATCATTCTCTCCTTCCCCGGGACTAAATCCGTGTaGGAAAGATGGGTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: LGLVTRAWEVSKIILSFPGTKSV*ERWVLG
Trigger: GCCCAGGACCCATCTTTCTCACACGGATTTAGTCCC...GGGGAAGGAGAGAATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR TCA 90 bp CTTGGTCTGGTCACCAGGGCTTGGGAAGTCAGCAAAATCATTCTCTCCTTCCCCGGGTGGACTCATGTCTaGTTGTTGCTCCTCTTCCAC +
Preference number: 2 (lower is better)
Translates to: LGLVTRAWEVSKIILSFPGWTHV*LLLLFH
Trigger: GTGGAAGAGGAGCAACAATCAGACATGAGTCCACCC...GGGGAAGGAGAGAATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CAA 90 bp TTAAATTCCACCGTCAGGGAGAGTCTCTGTAAGATGGTGCCCTCCTaGGGAGATTCAGACTTTCGGAGTTGGATGAGGGGGAGATCCACG +
Preference number: 2 (lower is better)
Translates to: LNSTVRESLCKMVPS*GDSDFRSWMRGRST
Trigger: CGTGGATCTCCCCCTCATCCAACTCCGAAAGTCTGAATCTCCCAAGGAGGGCACCATCTTACAGAGACTCTCCCTGACGGTGGAATTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CAA 90 bp CTCTTGAATGTTCATCCAACTGGAGGAATTATGCTGGGCCCTGCCTaGGTCTGGTCACCAGGGCTTGGGAAGTCAGCAAAATCATTCTCT +
Preference number: 2 (lower is better)
Translates to: LLNVHPTGGIMLGPA*VWSPGLGKSAKSFS
Trigger: AGAGAATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAGGCAGGGCCCAGCATAATTCCTCCAGTTGGATGAACATTCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR CCA 90 bp CCACCAAGAGCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCGAGATCCACGTTTCTTaGAGTGCACTATTTCTCAGT +
Preference number: 2 (lower is better)
Translates to: PPRAEAWSPKGGLMSDCCEIHVS*SALFLS
Trigger: ACTGAGAAATAGTGCACTCCAAGAAACGTGGATCTC...GCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGCTCTTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR TCA 90 bp TTCTCTACACTGAAGTTCTTAGGACAGCAGAGAACCCAAACTCAGTCCAAAGTATCACTCCAGACTCAGTaGCCGAGGGCATGTGAATGG +
Preference number: 2 (lower is better)
Translates to: FSTLKFLGQQRTQTQSKVSLQTQ*PRACEW
Trigger: CCATTCACATGCCCTCGGTCACTGAGTCTGGAGTGA...TACTTTGGACTGAGTTTGGGTTCTCTGCTGTCCTAAGAACTTCAGTGTAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR CCA 90 bp TTCTCTACACTGAAGTTCTTAGGACAGCAGAGAACCCAAACTCAGTCCAAAGTATCAGACTTTCGGAGTTaGATGAGGGGGAGATCCACG +
Preference number: 2 (lower is better)
Translates to: FSTLKFLGQQRTQTQSKVSDFRS*MRGRST
Trigger: CGTGGATCTCCCCCTCATCCAACTCCGAAAGTCTGA...TACTTTGGACTGAGTTTGGGTTCTCTGCTGTCCTAAGAACTTCAGTGTAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR GCA 90 bp CAGGAAGATGGGCTATCTCAAAGAATCTCCTTTGATGCAGAAGCATTCCAGAAACTCATGTCTGATTGTTaGTCCTCTTCCACAGCAGGG +
Preference number: 2 (lower is better)
Translates to: QEDGLSQRISFDAEAFQKLMSDC*SSSTAG
Trigger: CCCTGCTGTGGAAGAGGAGCAACAATCAGACATGAG...TTTCTGGAATGCTTCTGCATCAAAGGAGATTCTTTGAGATAGCCCATCTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR GCA 90 bp CAGGAAGATGGGCTATCTCAAAGAATCTCCTTTGATGCAGAAGCATTCCAGAAATCCCAGAGGATTCCTTaGCCTTTGCTGTGGACAATT +
Preference number: 2 (lower is better)
Translates to: QEDGLSQRISFDAEAFQKSQRIP*PLLWTI
Trigger: AATTGTCCACAGCAAAGGGCAAGGAATCCTCTGGGA...TTTCTGGAATGCTTCTGCATCAAAGGAGATTCTTTGAGATAGCCCATCTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR TCA 90 bp CAGGAAGATGGGCTATCTCAAAGAATCTCCTTTGATGCAGAAGCATTCCAGAAAACACTTTGGATAGAGTaGAGCAACATGGAGCTCATA +
Preference number: 2 (lower is better)
Translates to: QEDGLSQRISFDAEAFQKTLWIE*SNMELI
Trigger: TATGAGCTCCATGTTGCTTCACTCTATCCAAAGTGT...TTTCTGGAATGCTTCTGCATCAAAGGAGATTCTTTGAGATAGCCCATCTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR GCA 90 bp AAGATGGGCTATCTCAAAGAATCTCCTTTGATGCAGAAGCATTCCAGAAATAGTGGATTCCTTGCCCTTTaGTGTGGACAATTAGTGTTG +
Preference number: 2 (lower is better)
Translates to: KMGYLKESPLMQKHSRNSGFLAL*CGQLVL
Trigger: CAACACTAATTGTCCACAGCAAAGGGCAAGGAATCC...ACTATTTCTGGAATGCTTCTGCATCAAAGGAGATTCTTTGAGATAGCCCATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CCA 72 bp GTGTGGGTGTCCCTGGGCCCACCAAGAGCTGAGGCCTaGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGC +
Preference number: 3 (lower is better)
Translates to: VWVSLGPPRAEA*SPKGGLMSDCC
Trigger: GCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGCTCTTGGTGGGCCCAGGGACACCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR TCA 72 bp ATCCGTGTGAGAAAGATGGGTCCTGGGCTAGTCGTCTaGGACAGCCCCCGAGTCACCAGGAGGGCATATCCT +
Preference number: 3 (lower is better)
Translates to: IRVRKMGPGLVV*DSPRVTRRAYP
Trigger: AGGATATGCCCTCCTGGTGACTCGGGGGCTGTCTCAGACGACTAGCCCAGGACCCATCTTTCTCACACGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR TCA 72 bp TTAGGGGTGGTGTGGTGCTGGGACACGCCAACAGCCTaGCTTCCTCAACCCGTGGTTCACTCCAGACTCAGT +
Preference number: 3 (lower is better)
Translates to: LGVVWCWDTPTA*LPQPVVHSRLS
Trigger: ACTGAGTCTGGAGTGAACCACGGGTTGAGGAAGTCAGGCTGTTGGCGTGTCCCAGCACCACACCACCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CCA 72 bp AGGGTGGGACTAAATCCGTGTGAGAAAGATGGGTCCTaGGCTAGTCGTCTGAGACAGCCCCCGAGTCACCAG +
Preference number: 3 (lower is better)
Translates to: RVGLNPCEKDGS*ASRLRQPPSHQ
Trigger: CTGGTGACTCGGGGGCTGTCTCAGACGACTAGCCCAGGACCCATCTTTCTCACACGGATTTAGTCCCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR TCA 72 bp CTGACTTCCTCAACCCGTGGTTCACTCCAGACTCAGTaGCCGAGGGCATGTGAATGGGACACAAAAGCAGGC +
Preference number: 3 (lower is better)
Translates to: LTSSTRGSLQTQ*PRACEWDTKAG
Trigger: GCCTGCTTTTGTGTCCCATTCACATGCCCTCGGTCACTGAGTCTGGAGTGAACCACGGGTTGAGGAAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR TCA 72 bp GGCCTCGGTCTCCAGCCAGGTAGGAACGAGCTCTCTTaGATGTTCATCCAACTGGAGGAATTATGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: GLGLQPGRNELS*MFIQLEELCWA
Trigger: GGCCCAGCATAATTCCTCCAGTTGGATGAACATTCAAGAGAGCTCGTTCCTACCTGGCTGGAGACCGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CCA 72 bp CTTTCGGAGTTGGATGAGGGGGAGATCCACGTTTCTTaGAGTGCACTATTTCTCAGTGTTCGGGAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: LSELDEGEIHVS*SALFLSVREGR
Trigger: CCTCCCCTCCCGAACACTGAGAAATAGTGCACTCCAAGAAACGTGGATCTCCCCCTCATCCAACTCCGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CCA 72 bp ATGGTGCCCTCCTTGGGAGATTCAGACTTTCGGAGTTaGATGAGGGGGAGATCCACGTTTCTTGGAGTGCAC +
Preference number: 3 (lower is better)
Translates to: MVPSLGDSDFRS*MRGRSTFLGVH
Trigger: GTGCACTCCAAGAAACGTGGATCTCCCCCTCATCCAACTCCGAAAGTCTGAATCTCCCAAGGAGGGCACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR TCA 72 bp CCGTGGTTCACTCCAGACTCAGTGACCGAGGGCATGTaGATGGGACACAAAAGCAGGCCTTTCACTGTGTTT +
Preference number: 3 (lower is better)
Translates to: PWFTPDSVTEGM*MGHKSRPFTVF
Trigger: AAACACAGTGAAAGGCCTGCTTTTGTGTCCCATTCACATGCCCTCGGTCACTGAGTCTGGAGTGAACCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR GCA 72 bp GGGGGAAGAAACGGAAGAAGCTCCCAGAGGATTCCTTaGCCTTTGCTGTGGACAATTAGTGTTGTCCATGGG +
Preference number: 3 (lower is better)
Translates to: GGRNGRSSQRIP*PLLWTISVVHG
Trigger: CCCATGGACAACACTAATTGTCCACAGCAAAGGGCAAGGAATCCTCTGGGAGCTTCTTCCGTTTCTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CCA 72 bp TTCATCCAACTGGAGGAATTATGCTGGGCCCTGCCTTaGTCTGGTCACCAGGGCTTGGGAAGTCAGCAAAAT +
Preference number: 3 (lower is better)
Translates to: FIQLEELCWALP*SGHQGLGSQQN
Trigger: ATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAGGCAGGGCCCAGCATAATTCCTCCAGTTGGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CCA 72 bp CAGGTAGGAACGAGCTCTCTTGAATGTTCATCCAACTaGAGGAATTATGCTGGGCCCTGCCTTGGTCTGGTC +
Preference number: 3 (lower is better)
Translates to: QVGTSSLECSSN*RNYAGPCLGLV
Trigger: GACCAGACCAAGGCAGGGCCCAGCATAATTCCTCCAGTTGGATGAACATTCAAGAGAGCTCGTTCCTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR GCA 72 bp CTGACAGGGTGTCCAAACATCTTGGATCTGGTCTTCTaGTTGGGGGAATTAAGCCCAGAACATACCCCAGCA +
Preference number: 3 (lower is better)
Translates to: LTGCPNILDLVF*LGELSPEHTPA
Trigger: TGCTGGGGTATGTTCTGGGCTTAATTCCCCCAAGCAGAAGACCAGATCCAAGATGTTTGGACACCCTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR CAA 90 bp CCAAACTCAGTCCAAAGTAACCTATTCCCAAACACCATCGGTCAGAAGCAGAGGTTCAGACTTTCGGAGTaGGATGAGGGGGAGATCCAC +
Preference number: 3 (lower is better)
Translates to: PNSVQSNLFPNTIGQKQRFRLSE*DEGEIH
Trigger: GTGGATCTCCCCCTCATCCAACTCCGAAAGTCTGAA...CCTCTGCTTCTGACCGATGGTGTTTGGGAATAGGTTACTTTGGACTGAGTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CCA 72 bp AGTTACACTTGTGGGCCTAGAGCAGCACTTTCACCGTaGTTCTCAGCACTCTTGAGAGATAGCAAGAGCTCA +
Preference number: 3 (lower is better)
Translates to: SYTCGPRAALSP*FSALLRDSKSS
Trigger: TGAGCTCTTGCTATCTCTCAAGAGTGCTGAGAACCACGGTGAAAGTGCTGCTCTAGGCCCACAAGTGTAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR CAA 90 bp CTTGGTCTGGTCACCAGGGCTTGGGAAGTCAGCAAAATCATTCTCTCCTTCCCCATAAAATCCCCTGCCTaGAAATTCTCTTGCTCCATG +
Preference number: 3 (lower is better)
Translates to: LGLVTRAWEVSKIILSFPIKSPA*KFSCSM
Trigger: CATGGAGCAAGAGAATTTCAAGGCAGGGGATTTTAT...GGGGAAGGAGAGAATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR TCA 72 bp AGATTCAGAAATCTAATTAAACTTGGGACCAACGTCTaGCAGGGTGTCCAAACATCTTGGATCTGGTCTTCT +
Preference number: 3 (lower is better)
Translates to: RFRNLIKLGTNV*QGVQTSWIWSS
Trigger: AGAAGACCAGATCCAAGATGTTTGGACACCCTGTCAGACGTTGGTCCCAAGTTTAATTAGATTTCTGAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR TCA 72 bp AGCTCAGGAAGATGGGCTATCTCAAAGAATCTCCTTTaGTGCAGAAGCATTCCAGAAATAGTGTTTTTCAAG +
Preference number: 3 (lower is better)
Translates to: SSGRWAISKNLL*CRSIPEIVFFK
Trigger: CTTGAAAAACACTATTTCTGGAATGCTTCTGCATCAAAGGAGATTCTTTGAGATAGCCCATCTTCCTGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR-3UTR CAA 90 bp AGTCCATTATTCTTAGAAAAGCGTAACTTTCCCCCAACTTCTGGCATTAAGCAAAGCTTCATTCACATTTaGGGTCAGTCATTCAACAAC +
Preference number: 3 (lower is better)
Translates to: SPLFLEKRNFPPTSGIKQSFIHI*GQSFNN
Trigger: GTTGTTGAATGACTGACCCAAAATGTGAATGAAGCT...TTGCTTAATGCCAGAAGTTGGGGGAAAGTTACGCTTTTCTAAGAATAATGGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp CCACCGATGAGCCACAGGAGATCACCTGGCACTTTAGGGGTGGTGTGGTGCTGGTCAGCAGGGCAGCCCTaGAGCCACGCACCCACAGGT +
Preference number: 4 (lower is better)
Translates to: PPMSHRRSPGTLGVVWCWSAGQP*SHAPTG
Trigger: ACCTGTGGGTGCGTGGCTGCAGGGCTGCCCTGCTGA...CCAGCACCACACCACCCCTAAAGTGCCAGGTGATCTCCTGTGGCTCATCGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp AGCAGGGCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCCAAGCTGTAGGGAGCTaGCCTGGGGGCTACCCATGT +
Preference number: 4 (lower is better)
Translates to: SRAAAYPTASTDEPQEITQAVGS*PGGYPC
Trigger: ACATGGGTAGCCCCCAGGGCAGCTCCCTACAGCTTG...GGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGCCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp GCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCTGGCACACTTCATGCCGTTCTTaGGCCCTTGGCCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: AAAYPTASTDEPQEITWHTSCRS*ALGPGC
Trigger: ACACCCTGGGCCAAGGGCTCAAGAACGGCATGAAGT...GTGCCAGGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp GCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCTGGCACCACTGCTTCCACCGATaGGCCACAGGAGATCACCTG +
Preference number: 4 (lower is better)
Translates to: AAAYPTASTDEPQEITWHHCFHR*ATGDHL
Trigger: CAGGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTG...GTGCCAGGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp AGCAGGGCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCCGGCTTCCACCTGGTTaGCCTTGCCCAGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SRAAAYPTASTDEPQEITRLPPG*PCPASS
Trigger: TGAAGAAGCTGGGCAAGGGCAACCAGGTGGAAGCCG...GGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp CCACCGATGAGCCACAGGAGATCACCTGGCACTTTAGGGGTGGTGTGGTGCTGGTTAGGGGTGGTGTGGTaGTGGGACACGCCAACAGCC +
Preference number: 4 (lower is better)
Translates to: PPMSHRRSPGTLGVVWCWLGVVW*WDTPTA
Trigger: GGCTGTTGGCGTGTCCCAGCACCACACCACCCCTAA...CCAGCACCACACCACCCCTAAAGTGCCAGGTGATCTCCTGTGGCTCATCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp AGCAGGGCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCCGAGTCCCACTAGCCTaGGATCCCCGTGAATGCAGT +
Preference number: 4 (lower is better)
Translates to: SRAAAYPTASTDEPQEITRVPLA*DPRECS
Trigger: ACTGCATTCACGGGGATCCCAGGCTAGTGGGACTCG...GGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp CAACAGCCTGACTTCCTCAACCCGTGGTTCACTCCAGACTCAGTGACCGAGGGCTGCTGGGCCCTGCCTTaGTCTGGTCACCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: QQPDFLNPWFTPDSVTEGCWALP*SGHQGL
Trigger: CAAGCCCTGGTGACCAGACCAAGGCAGGGCCCAGCA...GCCCTCGGTCACTGAGTCTGGAGTGAACCACGGGTTGAGGAAGTCAGGCTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp CCACCAAGAGCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCCCTGGGCTAGTCGTCTaGGACAGCCCCCGAGTCACC +
Preference number: 4 (lower is better)
Translates to: PPRAEAWSPKGGLMSDCCPGLVV*DSPRVT
Trigger: GGTGACTCGGGGGCTGTCTCAGACGACTAGCCCAGG...GCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGCTCTTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp GCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCTCCTCTTCCCCCTCGGCTTCCACCTaGTTGCCCTTGCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AEAWSPKGGLMSDCCSSSPSAST*LPLPSF
Trigger: GAAGCTGGGCAAGGGCAACCAGGTGGAAGCCGAGGG...GGAAGAGGAGCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp GCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCTCCTCTTCCCGGAGAACCAGTTCATaGGCCAGAGCCCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: AEAWSPKGGLMSDCCSSSRRTSS*ARALGP
Trigger: TGGCCCAAGGGCTCTGGCTCATGAACTGGTTCTCCG...GGAAGAGGAGCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp GCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCTGGCACCTCATGTCTGATTGTTaGTCCTCTTCCACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: AAAYPTASTDEPQEITWHLMSDC*SSSTAG
Trigger: CCCTGCTGTGGAAGAGGAGCAACAATCAGACATGAG...GTGCCAGGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp CCACCAAGAGCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCCCGTTCTTGAGCCCTTaGCCCAGGGTGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PPRAEAWSPKGGLMSDCCPFLSP*PRVFSS
Trigger: GCTGGAGAACACCCTGGGCCAAGGGCTCAAGAACGG...GCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGCTCTTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp CCACCAAGAGCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCTGGGATCCCCGTGAATaGAGTAGTGGTGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PPRAEAWSPKGGLMSDCCWDPRE*SSGGRG
Trigger: ACCCCTGCCACCACTACTGCATTCACGGGGATCCCA...GCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGCTCTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp GGGGAGATCCACGTTTCTTGGAGTGCACTATTTCTCAGTGTTCGGGAGGGGAGGCTCGGAATCACAGCTTaGGCAGGGGATAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GEIHVSWSALFLSVREGRLGITA*AGDSPG
Trigger: ACCAGGACTATCCCCTGCTCAAGCTGTGATTCCGAG...CCTCCCCTCCCGAACACTGAGAAATAGTGCACTCCAAGAAACGTGGATCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp CAACAGCCTGACTTCCTCAACCCGTGGTTCACTCCAGACTCAGTGACCGAGGGCGTGCTGAGTTGTTGGTaGTCTGATACTGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: QQPDFLNPWFTPDSVTEGVLSCW*SDTGCR
Trigger: CCTGCATCCAGTATCAGATCACCAACAACTCAGCAC...GCCCTCGGTCACTGAGTCTGGAGTGAACCACGGGTTGAGGAAGTCAGGCTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp CTGTGTGGGTGTCCCTGGGCCCACCAAGAGCTGAGGCCTGGTCTCCAAAGGGTGGTAACTGTAGTGTGCTaGGTTGTTGGTGATCTGATA +
Preference number: 4 (lower is better)
Translates to: LCGCPWAHQELRPGLQRVVTVVC*VVGDLI
Trigger: TATCAGATCACCAACAACTCAGCACACTACAGTTAC...CACCCTTTGGAGACCAGGCCTCAGCTCTTGGTGGGCCCAGGGACACCCACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp CCACCAAGAGCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCGAGCTCAGGGACCTTTaGCAAAGATGGCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PPRAEAWSPKGGLMSDCCELRDL*QRWLAQ
Trigger: CTGAGCCAGCCATCTTTGGCAAAGGTCCCTGAGCTC...GCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGCTCTTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CAA 72 bp ACCGTCAGGGAGAGTCTCTGTAAGATGGTGCCCTCCTaGGGAGATTCAGACTTTCGGAGTTGGATGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TVRESLCKMVPS*GDSDFRSWMRG
Trigger: CCCCCTCATCCAACTCCGAAAGTCTGAATCTCCCAAGGAGGGCACCATCTTACAGAGACTCTCCCTGACGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CAA 72 bp TTATGCTGGGCCCTGCCTTGGTCTGGTCACCAGGGCTaGGGAAGTCAGCAAAATCATTCTCTCCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LCWALPWSGHQG*GSQQNHSLLPL
Trigger: CAGGGGAAGGAGAGAATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAGGCAGGGCCCAGCATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp GGGGAGATCCACGTTTCTTGGAGTGCACTATTTCTCAGTGTTCGGGAGGGGAGGCTTTCAGTAGCGCCATaGTTGCCAAGTGTAGTCCGG +
Preference number: 4 (lower is better)
Translates to: GEIHVSWSALFLSVREGRLSVAP*LPSVVR
Trigger: CCGGACTACACTTGGCAAGCATGGCGCTACTGAAAG...CCTCCCCTCCCGAACACTGAGAAATAGTGCACTCCAAGAAACGTGGATCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp AACTTGGGACCAACGTCTGACAGGGTGTCCAAACATCTTGGATCTGGTCTTCTGTGTAGGGAGCTGCCCTaGGGGCTACCCATGTCGAGT +
Preference number: 4 (lower is better)
Translates to: NLGPTSDRVSKHLGSGLLCRELP*GLPMSS
Trigger: ACTCGACATGGGTAGCCCCCAGGGCAGCTCCCTACA...CAGAAGACCAGATCCAAGATGTTTGGACACCCTGTCAGACGTTGGTCCCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp GCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCTCCTCTTCCTCAGACTTTCGGAGTTaGATGAGGGGGAGATCCACG +
Preference number: 4 (lower is better)
Translates to: AEAWSPKGGLMSDCCSSSSDFRS*MRGRST
Trigger: CGTGGATCTCCCCCTCATCCAACTCCGAAAGTCTGA...GGAAGAGGAGCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp GGGGAGATCCACGTTTCTTGGAGTGCACTATTTCTCAGTGTTCGGGAGGGGAGGGAGAAAGATGGGTCCTaGGCTAGTCGTCTGAGACAG +
Preference number: 4 (lower is better)
Translates to: GEIHVSWSALFLSVREGREKDGS*ASRLRQ
Trigger: CTGTCTCAGACGACTAGCCCAGGACCCATCTTTCTC...CCTCCCCTCCCGAACACTGAGAAATAGTGCACTCCAAGAAACGTGGATCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp GGGGAGATCCACGTTTCTTGGAGTGCACTATTTCTCAGTGTTCGGGAGGGGAGGCCGAGGGCATGTGAATaGGACACAAAAGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: GEIHVSWSALFLSVREGRPRACE*DTKAGL
Trigger: AAGGCCTGCTTTTGTGTCCCATTCACATGCCCTCGG...CCTCCCCTCCCGAACACTGAGAAATAGTGCACTCCAAGAAACGTGGATCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp CTTGGTCTGGTCACCAGGGCTTGGGAAGTCAGCAAAATCATTCTCTCCTTCCCCACTTTAGGGGTGGTGTaGTGCTGGGACACGCCAACA +
Preference number: 4 (lower is better)
Translates to: LGLVTRAWEVSKIILSFPTLGVV*CWDTPT
Trigger: TGTTGGCGTGTCCCAGCACCACACCACCCCTAAAGT...GGGGAAGGAGAGAATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp CCACCGATGAGCCACAGGAGATCACCTGGCACTTTAGGGGTGGTGTGGTGCTGGGCTAGCTCAGGAAGATaGGCTATCTCAAAGAATCTC +
Preference number: 4 (lower is better)
Translates to: PPMSHRRSPGTLGVVWCWASSGR*AISKNL
Trigger: GAGATTCTTTGAGATAGCCCATCTTCCTGAGCTAGC...CCAGCACCACACCACCCCTAAAGTGCCAGGTGATCTCCTGTGGCTCATCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp AGCAGGGCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCAGCAGAGGTAAGTTATaGACTGTTCCCTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SRAAAYPTASTDEPQEITSRGKL*TVPFLV
Trigger: AACCAGAAAGGGAACAGTCCATAACTTACCTCTGCT...GGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGCCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp GCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCTGGCACGTATGGATCATTCCTTaGCCTCAACGAGATTCAGAA +
Preference number: 4 (lower is better)
Translates to: AAAYPTASTDEPQEITWHVWIIP*PQRDSE
Trigger: TTCTGAATCTCGTTGAGGCCAAGGAATGATCCATAC...GTGCCAGGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CAA 72 bp GATGGTGCCCTCCTTGGGAGATTCAGACTTTCGGAGTaGGATGAGGGGGAGATCCACGTTTCTTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: DGALLGRFRLSE*DEGEIHVSWSA
Trigger: TGCACTCCAAGAAACGTGGATCTCCCCCTCATCCAACTCCGAAAGTCTGAATCTCCCAAGGAGGGCACCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CAA 72 bp GTTCATCCAACTGGAGGAATTATGCTGGGCCCTGCCTaGGTCTGGTCACCAGGGCTTGGGAAGTCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: VHPTGGIMLGPA*VWSPGLGKSAK
Trigger: TTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAGGCAGGGCCCAGCATAATTCCTCCAGTTGGATGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp CCTTGGTCTGGTCACCAGGGCTTGGGAAGTCAGCAAAATCATTCTCTCCTTCCCCGATGGTCTTCTTCATaGAACACCTGCCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PWSGHQGLGSQQNHSLLPRWSSS*NTCQGC
Trigger: ACACCCCTGGCAGGTGTTTCATGAAGAAGACCATCG...GGGAAGGAGAGAATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp CCACCAAGAGCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCTGTTGCCGCAGCATTTaGACTCGATCTGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: PPRAEAWSPKGGLMSDCCCCRSI*TRSAAC
Trigger: ACATGCTGCAGATCGAGTTCAAATGCTGCGGCAACA...GCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGCTCTTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp GGGGAGATCCACGTTTCTTGGAGTGCACTATTTCTCAGTGTTCGGGAGGGGAGGGGTTCTCAGCACTCTTaGGAGATAGCAAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GEIHVSWSALFLSVREGRGSQHS*EIARAQ
Trigger: CTGAGCTCTTGCTATCTCTCAAGAGTGCTGAGAACC...CCTCCCCTCCCGAACACTGAGAAATAGTGCACTCCAAGAAACGTGGATCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp CCAAACTCAGTCCAAAGTAACCTATTCCCAAACACCATCGGTCAGAAGCAGAGGCTGGATGCAGGGCCGTaGCGAGCTAGGATTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PNSVQSNLFPNTIGQKQRLDAGP*RARIAA
Trigger: TGCTGCAATCCTAGCTCGCCACGGCCCTGCATCCAG...CCTCTGCTTCTGACCGATGGTGTTTGGGAATAGGTTACTTTGGACTGAGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp AACTTGGGACCAACGTCTGACAGGGTGTCCAAACATCTTGGATCTGGTCTTCTGCAGATTCCTCGGGGTTaGACACACCATCCAGCGACG +
Preference number: 4 (lower is better)
Translates to: NLGPTSDRVSKHLGSGLLQIPRG*THHPAT
Trigger: CGTCGCTGGATGGTGTGTCCAACCCCGAGGAATCTG...CAGAAGACCAGATCCAAGATGTTTGGACACCCTGTCAGACGTTGGTCCCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp AGACTTTCGGAGTTGGATGAGGGGGAGATCCACGTTTCTTGGAGTGCACTATTTGCCCTTGGGCCAACTTaGCCCGCTTCTTCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: RLSELDEGEIHVSWSALFALGPT*PASSGQ
Trigger: TTGACCAGAAGAAGCGGGTCAAGTTGGCCCAAGGGC...AAATAGTGCACTCCAAGAAACGTGGATCTCCCCCTCATCCAACTCCGAAAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp TGGATGAGGGGGAGATCCACGTTTCTTGGAGTGCACTATTTCTCAGTGTTCGGGCACCCATGGAGTTCATaGGGCTGCTGTAGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: WMRGRSTFLGVHYFSVFGHPWSS*GCCSSS
Trigger: TGAGCTACTACAGCAGCCTCATGAACTCCATGGGTG...CCCGAACACTGAGAAATAGTGCACTCCAAGAAACGTGGATCTCCCCCTCATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp TTCAACAACTGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTGGCCTGGCCTGCGTCTaGGCCCTCGGCTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: FNNCVSNAFRDPKLKFHRGLACV*ALGFHL
Trigger: CAGGTGGAAGCCGAGGGCGCAGACGCAGGCCAGGCC...ACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACAGTTGTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp CCAAACTCAGTCCAAAGTAACCTATTCCCAAACACCATCGGTCAGAAGCAGAGGTCTGGCATACTTGGCTaGGTCCAGGGCGTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: PNSVQSNLFPNTIGQKQRSGILG*VQGVVA
Trigger: TGCTACGACGCCCTGGACCCAGCCAAGTATGCCAGA...CCTCTGCTTCTGACCGATGGTGTTTGGGAATAGGTTACTTTGGACTGAGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp CCACCAAGAGCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCGAATGTTCATCCAACTaGAGGAATTATGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PPRAEAWSPKGGLMSDCCECSSN*RNYAGP
Trigger: GGGCCCAGCATAATTCCTCCAGTTGGATGAACATTC...GCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGCTCTTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp TGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTCAGGGAGAGCTAGGGCAGCGGGCCTaGAGGGAGCTTCACTCACAT +
Preference number: 4 (lower is better)
Translates to: CVSNAFRDPKLKFHRQGELGQRA*RELHSH
Trigger: ATGTGAGTGAAGCTCCCTTCAGGCCCGCTGCCCTAG...CTCTCCCTGACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CAA 72 bp AGAAACGGAAGAAGCTCCCAGAGGATTCCTTGCCCTTaGCTGTGGACAATTAGTGTTGTCCATGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RNGRSSQRIPCP*LWTISVVHGAV
Trigger: CACAGCCCCATGGACAACACTAATTGTCCACAGCAAAGGGCAAGGAATCCTCTGGGAGCTTCTTCCGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CAA 72 bp ACAGGGTGTCCAAACATCTTGGATCTGGTCTTCTGCTaGGGGGAATTAAGCCCAGAACATACCCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TGCPNILDLVFC*GELSPEHTPAA
Trigger: TGCTGCTGGGGTATGTTCTGGGCTTAATTCCCCCAAGCAGAAGACCAGATCCAAGATGTTTGGACACCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp GCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCTCCTCTTCCACACTTTGGATAGAGTaGAGCAACATGGAGCTCATA +
Preference number: 4 (lower is better)
Translates to: AEAWSPKGGLMSDCCSSSTLWIE*SNMELI
Trigger: TATGAGCTCCATGTTGCTTCACTCTATCCAAAGTGT...GGAAGAGGAGCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp AGTCCATTATTCTTAGAAAAGCGTAACTTTCCCCCAACTTCTGGCATTAAGCAAGGGCCCACCAAGAGCTaGGGCCTGGTCTCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SPLFLEKRNFPPTSGIKQGPTKS*GLVSKG
Trigger: CCCTTTGGAGACCAGGCCTCAGCTCTTGGTGGGCCC...TTGCTTAATGCCAGAAGTTGGGGGAAAGTTACGCTTTTCTAAGAATAATGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp TGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTCAGGGAGAGATGAGCCAGAGCCCTTaGGCCAACTTGACCCGCTTC +
Preference number: 4 (lower is better)
Translates to: CVSNAFRDPKLKFHRQGEMSQSP*ANLTRF
Trigger: GAAGCGGGTCAAGTTGGCCCAAGGGCTCTGGCTCAT...CTCTCCCTGACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp TGGATGAGGGGGAGATCCACGTTTCTTGGAGTGCACTATTTCTCAGTGTTCGGGAGAGTCTCTGTAAGATaGTGCCCTCCTTGGGAGATT +
Preference number: 4 (lower is better)
Translates to: WMRGRSTFLGVHYFSVFGRVSVR*CPPWEI
Trigger: AATCTCCCAAGGAGGGCACCATCTTACAGAGACTCT...CCCGAACACTGAGAAATAGTGCACTCCAAGAAACGTGGATCTCCCCCTCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp CCAAACTCAGTCCAAAGTAACCTATTCCCAAACACCATCGGTCAGAAGCAGAGGCCAGGTAGCGATTGCTaGTCCACTGAATCTCAAACC +
Preference number: 4 (lower is better)
Translates to: PNSVQSNLFPNTIGQKQRPGSDC*STESQT
Trigger: GGTTTGAGATTCAGTGGATCAGCAATCGCTACCTGG...CCTCTGCTTCTGACCGATGGTGTTTGGGAATAGGTTACTTTGGACTGAGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp AACTTGGGACCAACGTCTGACAGGGTGTCCAAACATCTTGGATCTGGTCTTCTGAGGAACGAGCTCTCTTaGATGTTCATCCAACTGGAG +
Preference number: 4 (lower is better)
Translates to: NLGPTSDRVSKHLGSGLLRNELS*MFIQLE
Trigger: CTCCAGTTGGATGAACATTCAAGAGAGCTCGTTCCT...CAGAAGACCAGATCCAAGATGTTTGGACACCCTGTCAGACGTTGGTCCCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp GCTTATGCACCAAGTGACACTTTGGATAGAGTGAAGCAACATGGAGCTCATAAGAAGTGTAGTCCGGGTTaGTTCCCACAGCACAGCTCC +
Preference number: 4 (lower is better)
Translates to: AYAPSDTLDRVKQHGAHKKCSPG*FPQHSS
Trigger: GGAGCTGTGCTGTGGGAAGCAACCCGGACTACACTT...CTTATGAGCTCCATGTTGCTTCACTCTATCCAAAGTGTCACTTGGTGCATAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp AACTTGGGACCAACGTCTGACAGGGTGTCCAAACATCTTGGATCTGGTCTTCTGTCCCAGAGGATTCCTTaGCCTTTGCTGTGGACAATT +
Preference number: 4 (lower is better)
Translates to: NLGPTSDRVSKHLGSGLLSQRIP*PLLWTI
Trigger: AATTGTCCACAGCAAAGGGCAAGGAATCCTCTGGGA...CAGAAGACCAGATCCAAGATGTTTGGACACCCTGTCAGACGTTGGTCCCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp CAGGAAGATGGGCTATCTCAAAGAATCTCCTTTGATGCAGAAGCATTCCAGAAAGCCAGGGCTTCCATCTaGCATACTTGGCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QEDGLSQRISFDAEAFQKARASI*HTWLGP
Trigger: TGGACCCAGCCAAGTATGCCAGATGGAAGCCCTGGC...TTTCTGGAATGCTTCTGCATCAAAGGAGATTCTTTGAGATAGCCCATCTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp AGTCCATTATTCTTAGAAAAGCGTAACTTTCCCCCAACTTCTGGCATTAAGCAACTGTGTGGGTGTCCCTaGGCCCACCAAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SPLFLEKRNFPPTSGIKQLCGCP*AHQELR
Trigger: CCTCAGCTCTTGGTGGGCCCAGGGACACCCACACAG...TTGCTTAATGCCAGAAGTTGGGGGAAAGTTACGCTTTTCTAAGAATAATGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp AGTCCATTATTCTTAGAAAAGCGTAACTTTCCCCCAACTTCTGGCATTAAGCAAGGCCCTGCCTTGGTCTaGTCACCAGGGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SPLFLEKRNFPPTSGIKQGPALV*SPGLGK
Trigger: CTTCCCAAGCCCTGGTGACCAGACCAAGGCAGGGCC...TTGCTTAATGCCAGAAGTTGGGGGAAAGTTACGCTTTTCTAAGAATAATGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp TTCTCTACACTGAAGTTCTTAGGACAGCAGAGAACCCAAACTCAGTCCAAAGTACTGGTTTTTGCCTTCTaGCCTCGGTCTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: FSTLKFLGQQRTQTQSKVLVFAF*PRSPAR
Trigger: CCTGGCTGGAGACCGAGGCCAGAAGGCAAAAACCAG...TACTTTGGACTGAGTTTGGGTTCTCTGCTGTCCTAAGAACTTCAGTGTAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp CCAAACTCAGTCCAAAGTAACCTATTCCCAAACACCATCGGTCAGAAGCAGAGGGCAGCACTTTCACCGTaGTTCTCAGCACTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: PNSVQSNLFPNTIGQKQRAALSP*FSALLR
Trigger: TCTCAAGAGTGCTGAGAACCACGGTGAAAGTGCTGC...CCTCTGCTTCTGACCGATGGTGTTTGGGAATAGGTTACTTTGGACTGAGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp TTCTCTACACTGAAGTTCTTAGGACAGCAGAGAACCCAAACTCAGTCCAAAGTAGGGACTAAATCCGTGTaGGAAAGATGGGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FSTLKFLGQQRTQTQSKVGTKSV*ERWVLG
Trigger: GCCCAGGACCCATCTTTCTCACACGGATTTAGTCCC...TACTTTGGACTGAGTTTGGGTTCTCTGCTGTCCTAAGAACTTCAGTGTAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp CAGGAAGATGGGCTATCTCAAAGAATCTCCTTTGATGCAGAAGCATTCCAGAAAGTGACCGAGGGCATGTaGATGGGACACAAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: QEDGLSQRISFDAEAFQKVTEGM*MGHKSR
Trigger: CCTGCTTTTGTGTCCCATTCACATGCCCTCGGTCAC...TTTCTGGAATGCTTCTGCATCAAAGGAGATTCTTTGAGATAGCCCATCTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp TGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTCAGGGAGAGCAACTGGAGGAATTATaGTGGGCCCTGCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: CVSNAFRDPKLKFHRQGEQLEEL*WALPWS
Trigger: AGACCAAGGCAGGGCCCAGCATAATTCCTCCAGTTG...CTCTCCCTGACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp TTCAACAACTGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTTCCAGCAGCCAGCCCTaGCTCTCGCTCTCAGATTCC +
Preference number: 4 (lower is better)
Translates to: FNNCVSNAFRDPKLKFHRSSSQP*LSLSDS
Trigger: GGAATCTGAGAGCGAGAGCCAGGGCTGGCTGCTGGA...ACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACAGTTGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp GCTTATGCACCAAGTGACACTTTGGATAGAGTGAAGCAACATGGAGCTCATAAGCCCCATCCCTATCAATaGGTTGGGCACAAAATGGCT +
Preference number: 4 (lower is better)
Translates to: AYAPSDTLDRVKQHGAHKPHPYQ*VGHKMA
Trigger: AGCCATTTTGTGCCCAACTCATTGATAGGGATGGGG...CTTATGAGCTCCATGTTGCTTCACTCTATCCAAAGTGTCACTTGGTGCATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp CAGGAAGATGGGCTATCTCAAAGAATCTCCTTTGATGCAGAAGCATTCCAGAAACTTGGGACCAACGTCTaGCAGGGTGTCCAAACATCT +
Preference number: 4 (lower is better)
Translates to: QEDGLSQRISFDAEAFQKLGTNV*QGVQTS
Trigger: AGATGTTTGGACACCCTGTCAGACGTTGGTCCCAAG...TTTCTGGAATGCTTCTGCATCAAAGGAGATTCTTTGAGATAGCCCATCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp AAGATGGGCTATCTCAAAGAATCTCCTTTGATGCAGAAGCATTCCAGAAATAGTTCCATCTGGCATACTTaGCTGGGTCCAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: KMGYLKESPLMQKHSRNSSIWHT*LGPGRR
Trigger: ACGACGCCCTGGACCCAGCCAAGTATGCCAGATGGA...ACTATTTCTGGAATGCTTCTGCATCAAAGGAGATTCTTTGAGATAGCCCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp AAGATGGGCTATCTCAAAGAATCTCCTTTGATGCAGAAGCATTCCAGAAATAGTCCAAGAGCTGAGGCCTaGTCTCCAAAGGGTGGACTC +
Preference number: 4 (lower is better)
Translates to: KMGYLKESPLMQKHSRNSPRAEA*SPKGGL
Trigger: GAGTCCACCCTTTGGAGACCAGGCCTCAGCTCTTGG...ACTATTTCTGGAATGCTTCTGCATCAAAGGAGATTCTTTGAGATAGCCCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp TGGATGAGGGGGAGATCCACGTTTCTTGGAGTGCACTATTTCTCAGTGTTCGGGGCCTTGAAATTCTCTTaGTCCATGATTAAAGAATCC +
Preference number: 4 (lower is better)
Translates to: WMRGRSTFLGVHYFSVFGALKFS*SMIKES
Trigger: GGATTCTTTAATCATGGAGCAAGAGAATTTCAAGGC...CCCGAACACTGAGAAATAGTGCACTCCAAGAAACGTGGATCTCCCCCTCATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp TTCAACAACTGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTCTGGAGGAATTATGCTaGGCCCTGCCTTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: FNNCVSNAFRDPKLKFHRLEELC*ALPWSG
Trigger: ACCAGACCAAGGCAGGGCCCAGCATAATTCCTCCAG...ACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACAGTTGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp TTCAACAACTGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTGAGTTGTTGGTGATCTaGTACTGGATGCAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: FNNCVSNAFRDPKLKFHRELLVI*YWMQGR
Trigger: ACGGCCCTGCATCCAGTATCAGATCACCAACAACTC...ACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACAGTTGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp AGTCCATTATTCTTAGAAAAGCGTAACTTTCCCCCAACTTCTGGCATTAAGCAAGGGTGGACTCATGTCTaGTTGTTGCTCCTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SPLFLEKRNFPPTSGIKQGWTHV*LLLLFH
Trigger: GTGGAAGAGGAGCAACAATCAGACATGAGTCCACCC...TTGCTTAATGCCAGAAGTTGGGGGAAAGTTACGCTTTTCTAAGAATAATGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp AGTCCATTATTCTTAGAAAAGCGTAACTTTCCCCCAACTTCTGGCATTAAGCAAGACTTCCTCAACCCGTaGTTCACTCCAGACTCAGTG +
Preference number: 4 (lower is better)
Translates to: SPLFLEKRNFPPTSGIKQDFLNP*FTPDSV
Trigger: CACTGAGTCTGGAGTGAACCACGGGTTGAGGAAGTC...TTGCTTAATGCCAGAAGTTGGGGGAAAGTTACGCTTTTCTAAGAATAATGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp TGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTCAGGGAGAGTTCAAGATGGGTATCTaGGGGGAAGAAACGGAAGAA +
Preference number: 4 (lower is better)
Translates to: CVSNAFRDPKLKFHRQGEFKMGI*GEETEE
Trigger: TTCTTCCGTTTCTTCCCCCCAGATACCCATCTTGAA...CTCTCCCTGACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp CAGGAAGATGGGCTATCTCAAAGAATCTCCTTTGATGCAGAAGCATTCCAGAAAGGTGTCCAAACATCTTaGATCTGGTCTTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QEDGLSQRISFDAEAFQKGVQTS*IWSSAW
Trigger: CCAAGCAGAAGACCAGATCCAAGATGTTTGGACACC...TTTCTGGAATGCTTCTGCATCAAAGGAGATTCTTTGAGATAGCCCATCTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp AGTCCATTATTCTTAGAAAAGCGTAACTTTCCCCCAACTTCTGGCATTAAGCAAGTCTCTGTAAGATGGTaGCCTCCTTGGGAGATTCAG +
Preference number: 4 (lower is better)
Translates to: SPLFLEKRNFPPTSGIKQVSVRW*PPWEIQ
Trigger: CTGAATCTCCCAAGGAGGGCACCATCTTACAGAGAC...TTGCTTAATGCCAGAAGTTGGGGGAAAGTTACGCTTTTCTAAGAATAATGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp GCTTATGCACCAAGTGACACTTTGGATAGAGTGAAGCAACATGGAGCTCATAAGTTGACCCGCTTCTTCTaGTCAAACTTGACTTTCAGT +
Preference number: 4 (lower is better)
Translates to: AYAPSDTLDRVKQHGAHKLTRFF*SNLTFS
Trigger: ACTGAAAGTCAAGTTTGACCAGAAGAAGCGGGTCAA...CTTATGAGCTCCATGTTGCTTCACTCTATCCAAAGTGTCACTTGGTGCATAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp TGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTCAGGGAGAGGAGATCCACGTTTCTTaGAGTGCACTATTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: CVSNAFRDPKLKFHRQGEEIHVS*SALFLS
Trigger: ACTGAGAAATAGTGCACTCCAAGAAACGTGGATCTC...CTCTCCCTGACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp TTCTCTACACTGAAGTTCTTAGGACAGCAGAGAACCCAAACTCAGTCCAAAGTACCTTGCCCTTTGCTGTaGACAATTAGTGTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: FSTLKFLGQQRTQTQSKVPCPLL*TISVVH
Trigger: ATGGACAACACTAATTGTCCACAGCAAAGGGCAAGG...TACTTTGGACTGAGTTTGGGTTCTCTGCTGTCCTAAGAACTTCAGTGTAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp AAGATGGGCTATCTCAAAGAATCTCCTTTGATGCAGAAGCATTCCAGAAATAGTTCTTCTGGTCAAACTTaGCTTTCAGTAGCGCCATGC +
Preference number: 4 (lower is better)
Translates to: KMGYLKESPLMQKHSRNSSSGQT*LSVAPC
Trigger: GCATGGCGCTACTGAAAGTCAAGTTTGACCAGAAGA...ACTATTTCTGGAATGCTTCTGCATCAAAGGAGATTCTTTGAGATAGCCCATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR TCA 90 bp ATTCACATTAGCTTCATTCACATTTTGGGTCAGTCATTCAACAACTGTGTGTCACGATTGCTGATCCACTaGATCTCAAACCAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: IHISFIHILGQSFNNCVSRLLIH*ISNQSR
Trigger: TCGGGACTGGTTTGAGATTCAGTGGATCAGCAATCG...TGACACACAGTTGTTGAATGACTGACCCAAAATGTGAATGAAGCTAATGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
3UTR CAA 72 bp TTTTCAGATTTCTGTGCTTATGCACCAAGTGACACTTaGGATAGAGTGAAGCAACATGGAGCTCATAAGAGG +
Preference number: 4 (lower is better)
Translates to: FSDFCAYAPSDT*DRVKQHGAHKR
Trigger: CCTCTTATGAGCTCCATGTTGCTTCACTCTATCCAAAGTGTCACTTGGTGCATAAGCACAGAAATCTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp TTCAACAACTGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTGGATTCCTTGCCCTTTaGTGTGGACAATTAGTGTTG +
Preference number: 4 (lower is better)
Translates to: FNNCVSNAFRDPKLKFHRGFLAL*CGQLVL
Trigger: CAACACTAATTGTCCACAGCAAAGGGCAAGGAATCC...ACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACAGTTGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp ATTCACATTAGCTTCATTCACATTTTGGGTCAGTCATTCAACAACTGTGTGTCATTGGATCTGGTCTTCTaGTTGGGGGAATTAAGCCCA +
Preference number: 4 (lower is better)
Translates to: IHISFIHILGQSFNNCVSLDLVF*LGELSP
Trigger: TGGGCTTAATTCCCCCAAGCAGAAGACCAGATCCAA...TGACACACAGTTGTTGAATGACTGACCCAAAATGTGAATGAAGCTAATGTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR GCA 90 bp ATTCACATTAGCTTCATTCACATTTTGGGTCAGTCATTCAACAACTGTGTGTCACATTTGAACTCGATCTaGAGCATGTCGATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: IHISFIHILGQSFNNCVSHLNSI*SMSMVF
Trigger: GAAGACCATCGACATGCTGCAGATCGAGTTCAAATG...TGACACACAGTTGTTGAATGACTGACCCAAAATGTGAATGAAGCTAATGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CCA 90 bp AGTCCATTATTCTTAGAAAAGCGTAACTTTCCCCCAACTTCTGGCATTAAGCAAGAGTTGGGCACAAAATaGCTCTCAGAATTATTCATC +
Preference number: 4 (lower is better)
Translates to: SPLFLEKRNFPPTSGIKQELGTK*LSELFI
Trigger: GATGAATAATTCTGAGAGCCATTTTGTGCCCAACTC...TTGCTTAATGCCAGAAGTTGGGGGAAAGTTACGCTTTTCTAAGAATAATGGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CCA 90 bp AAGGCCTTCCAGGTCTCCGGCACGCTCCTCTCCAGCAGCCAGCCCTaGCTCTCGCTCTCAGATTCCTCGGGGTTGGACACACCATCCAGC +
Preference number: 5 (lower is better)
Translates to: KAFQVSGTLLSSSQP*LSLSDSSGLDTPSS
Trigger: GCTGGATGGTGTGTCCAACCCCGAGGAATCTGAGAGCGAGAGCCAGGGCTGGCTGCTGGAGAGGAGCGTGCCGGAGACCTGGAAGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp AGCAGGGCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCTCCTGGTCCTGGGCGTaGTTTCTTCAGCGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: SRAAAYPTASTDEPQEITSWSWA*FLQRPS
Trigger: GGAAGGGCGCTGAAGAAACAACGCCCAGGACCAGGA...GGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS TCA 90 bp ACCTGCCAGGGGTGTCTGTGTCCCGGTAGTACTTCATGCCGTTCTTaGGCCCTTGGCCCAGGGTGTTCTCCAGCGAGCCCCGAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: TCQGCLCPGSTSCRS*ALGPGCSPASPEAE
Trigger: TTCTGCTTCGGGGCTCGCTGGAGAACACCCTGGGCCAAGGGCTCAAGAACGGCATGAAGTACTACCGGGACACAGACACCCCTGGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CCA 90 bp TCTCCAGCAGCCAGCCCTGGCTCTCGCTCTCAGATTCCTCGGGGTTaGACACACCATCCAGCGACGTCTGTAGGTAGCGCAGCCCAATTG +
Preference number: 5 (lower is better)
Translates to: SPAASPGSRSQIPRG*THHPATSVGSAAQL
Trigger: CAATTGGGCTGCGCTACCTACAGACGTCGCTGGATGGTGTGTCCAACCCCGAGGAATCTGAGAGCGAGAGCCAGGGCTGGCTGCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp AGCAGGGCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCTCAGATTCCTCGGGGTaGGACACACCATCCAGCGAC +
Preference number: 5 (lower is better)
Translates to: SRAAAYPTASTDEPQEITSDSSG*DTPSSD
Trigger: GTCGCTGGATGGTGTGTCCAACCCCGAGGAATCTGA...GGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp CTGTGTGGGTGTCCCTGGGCCCACCAAGAGCTGAGGCCTGGTCTCCAAAGGGTGAGAGCTCAGGGACCTTaGCCAAAGATGGCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: LCGCPWAHQELRPGLQRVRAQGP*PKMAGS
Trigger: TGAGCCAGCCATCTTTGGCAAAGGTCCCTGAGCTCT...CACCCTTTGGAGACCAGGCCTCAGCTCTTGGTGGGCCCAGGGACACCCACACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CCA 90 bp AGCCAGGTACGGCTTCAGCCAGGGCTTCCATCTGGCATACTTGGCTaGGTCCAGGGCGTCGTAGCAGATCTTCCCAGCCAGCGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: SQVRLQPGLPSGILG*VQGVVADLPSQRVE
Trigger: TTCAACTCGCTGGCTGGGAAGATCTGCTACGACGCCCTGGACCCAGCCAAGTATGCCAGATGGAAGCCCTGGCTGAAGCCGTACCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp GCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCTGGCACTTCCCAGCCAGCGAGTaGAAGACACAGGATAGCACC +
Preference number: 5 (lower is better)
Translates to: AAAYPTASTDEPQEITWHFPASE*KTQDST
Trigger: GGTGCTATCCTGTGTCTTCAACTCGCTGGCTGGGAA...GTGCCAGGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp GCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCTCCTCTTCCCCACGCACCCACAGGTaGAGCTCCTCCGTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: AEAWSPKGGLMSDCCSSSPRTHR*SSSVWW
Trigger: CCACCAGACGGAGGAGCTCAACCTGTGGGTGCGTGG...GGAAGAGGAGCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS TCA 90 bp TGTAGTAGCTCAGCAGGGCAGCCCTGCAGCCACGCACCCACAGGTTaGGCTCCTCCGTCTGGTGGTCGTAACTGTAGTGTGCTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: CSSSAGQPCSHAPTG*APPSGGRNCSVLSC
Trigger: ACAACTCAGCACACTACAGTTACGACCACCAGACGGAGGAGCTCAACCTGTGGGTGCGTGGCTGCAGGGCTGCCCTGCTGAGCTACTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS TCA 90 bp TGGCTGGGTCCAGGGCGTCGTAGCAGATCTTCCCAGCCAGCGAGTTaGAGACACAGGATAGCACCCCCATCCCTATCAATGAGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: WLGPGRRSRSSQPAS*RHRIAPPSLSMSWA
Trigger: TGCCCAACTCATTGATAGGGATGGGGGTGCTATCCTGTGTCTTCAACTCGCTGGCTGGGAAGATCTGCTACGACGCCCTGGACCCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp CCACCGATGAGCCACAGGAGATCACCTGGCACTTTAGGGGTGGTGTGGTGCTGGTTCCCTTTCTGGTTTTaGCCTTCTGGCCTCGGTCTC +
Preference number: 5 (lower is better)
Translates to: PPMSHRRSPGTLGVVWCWFPFWF*PSGLGL
Trigger: GAGACCGAGGCCAGAAGGCAAAAACCAGAAAGGGAA...CCAGCACCACACCACCCCTAAAGTGCCAGGTGATCTCCTGTGGCTCATCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS TCA 90 bp CCACAGGTTGAGCTCCTCCGTCTGGTGGTCGTAACTGTAGTGTGCTaGGTTGTTGGTGATCTGATACTGGATGCAGGGCCGTGGCGAGCT +
Preference number: 5 (lower is better)
Translates to: PQVELLRLVVVTVVC*VVGDLILDAGPWRA
Trigger: AGCTCGCCACGGCCCTGCATCCAGTATCAGATCACCAACAACTCAGCACACTACAGTTACGACCACCAGACGGAGGAGCTCAACCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp GCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCTCCTCTTCCCGGAGACTTAGGGCCTaGGGAAAAGTGCAGATGGCC +
Preference number: 5 (lower is better)
Translates to: AEAWSPKGGLMSDCCSSSRRLRA*GKVQMA
Trigger: GGCCATCTGCACTTTTCCCAAGGCCCTAAGTCTCCG...GGAAGAGGAGCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp GCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCTCCTCTTCCTCCACCTGGTTGCCCTaGCCCAGCTTCTTCACACTC +
Preference number: 5 (lower is better)
Translates to: AEAWSPKGGLMSDCCSSSSTWLP*PSFFTL
Trigger: GAGTGTGAAGAAGCTGGGCAAGGGCAACCAGGTGGA...GGAAGAGGAGCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp CAACAGCCTGACTTCCTCAACCCGTGGTTCACTCCAGACTCAGTGACCGAGGGCAAGATGGTGCCCTCCTaGGGAGATTCAGACTTTCGG +
Preference number: 5 (lower is better)
Translates to: QQPDFLNPWFTPDSVTEGKMVPS*GDSDFR
Trigger: CCGAAAGTCTGAATCTCCCAAGGAGGGCACCATCTT...GCCCTCGGTCACTGAGTCTGGAGTGAACCACGGGTTGAGGAAGTCAGGCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp CTGTGTGGGTGTCCCTGGGCCCACCAAGAGCTGAGGCCTGGTCTCCAAAGGGTGGCACCAAGTGACACTTaGGATAGAGTGAAGCAACAT +
Preference number: 5 (lower is better)
Translates to: LCGCPWAHQELRPGLQRVAPSDT*DRVKQH
Trigger: ATGTTGCTTCACTCTATCCAAAGTGTCACTTGGTGC...CACCCTTTGGAGACCAGGCCTCAGCTCTTGGTGGGCCCAGGGACACCCACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp AGCAGGGCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCTGGTTCTCAGCACTCTaGAGAGATAGCAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: SRAAAYPTASTDEPQEITWFSAL*RDSKSS
Trigger: TGAGCTCTTGCTATCTCTCAAGAGTGCTGAGAACCA...GGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp GCAGCAGCCTACCCCACTGCTTCCACCGATGAGCCACAGGAGATCACCTGGCACCCATCCACGTTGCTCTaGATTCGATCTTTGACTTCT +
Preference number: 5 (lower is better)
Translates to: AAAYPTASTDEPQEITWHPSTLL*IRSLTS
Trigger: AGAAGTCAAAGATCGAATCAAGAGCAACGTGGATGG...GTGCCAGGTGATCTCCTGTGGCTCATCGGTGGAAGCAGTGGGGTAGGCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp CTTGGTCTGGTCACCAGGGCTTGGGAAGTCAGCAAAATCATTCTCTCCTTCCCCTCAGTAGCGCCATGCTaGCCAAGTGTAGTCCGGGTT +
Preference number: 5 (lower is better)
Translates to: LGLVTRAWEVSKIILSFPSVAPC*PSVVRV
Trigger: AACCCGGACTACACTTGGCAAGCATGGCGCTACTGA...GGGGAAGGAGAGAATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp CCACCGATGAGCCACAGGAGATCACCTGGCACTTTAGGGGTGGTGTGGTGCTGGTTCTTCTGGTCAAACTaGACTTTCAGTAGCGCCATG +
Preference number: 5 (lower is better)
Translates to: PPMSHRRSPGTLGVVWCWFFWSN*TFSSAM
Trigger: CATGGCGCTACTGAAAGTCAAGTTTGACCAGAAGAA...CCAGCACCACACCACCCCTAAAGTGCCAGGTGATCTCCTGTGGCTCATCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp GCTGAGGCCTGGTCTCCAAAGGGTGGACTCATGTCTGATTGTTGCTCCTCTTCCTCCCGAAAACCGTTGTaGCCGCAGCATTTGAACTCG +
Preference number: 5 (lower is better)
Translates to: AEAWSPKGGLMSDCCSSSSRKPL*PQHLNS
Trigger: CGAGTTCAAATGCTGCGGCAACAACGGTTTTCGGGA...GGAAGAGGAGCAACAATCAGACATGAGTCCACCCTTTGGAGACCAGGCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp CAACAGCCTGACTTCCTCAACCCGTGGTTCACTCCAGACTCAGTGACCGAGGGCGGAGATCCACGTTTCTaGGAGTGCACTATTTCTCAG +
Preference number: 5 (lower is better)
Translates to: QQPDFLNPWFTPDSVTEGGDPRF*ECTISQ
Trigger: CTGAGAAATAGTGCACTCCAAGAAACGTGGATCTCC...GCCCTCGGTCACTGAGTCTGGAGTGAACCACGGGTTGAGGAAGTCAGGCTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp CCTTGGTCTGGTCACCAGGGCTTGGGAAGTCAGCAAAATCATTCTCTCCTTCCCCAGTCCCGAAAACCGTaGTTGCCGCAGCATTTGAAC +
Preference number: 5 (lower is better)
Translates to: PWSGHQGLGSQQNHSLLPQSRKP*LPQHLN
Trigger: GTTCAAATGCTGCGGCAACAACGGTTTTCGGGACTG...GGGAAGGAGAGAATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS GCA 90 bp AACCAGTCCCGAAAACCGTTGTTGCCGCAGCATTTGAACTCGATCTaGAGCATGTCGATGGTCTTCTTCATGAAACACCTGCCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: NQSRKPLLPQHLNSI*SMSMVFFMKHLPGV
Trigger: CACCCCTGGCAGGTGTTTCATGAAGAAGACCATCGACATGCTGCAGATCGAGTTCAAATGCTGCGGCAACAACGGTTTTCGGGACTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CCA 90 bp CAGTTCATGAGCCAGAGCCCTTGGGCCAACTTGACCCGCTTCTTCTaGTCAAACTTGACTTTCAGTAGCGCCATGCTTGCCAAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: QFMSQSPWANLTRFF*SNLTFSSAMLAKCS
Trigger: ACTACACTTGGCAAGCATGGCGCTACTGAAAGTCAAGTTTGACCAGAAGAAGCGGGTCAAGTTGGCCCAAGGGCTCTGGCTCATGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CCA 90 bp ATGATGCCAGCCAACACGGAGAACCAGTTCATGAGCCAGAGCCCTTaGGCCAACTTGACCCGCTTCTTCTGGTCAAACTTGACTTTCAGT +
Preference number: 5 (lower is better)
Translates to: MMPANTENQFMSQSP*ANLTRFFWSNLTFS
Trigger: ACTGAAAGTCAAGTTTGACCAGAAGAAGCGGGTCAAGTTGGCCCAAGGGCTCTGGCTCATGAACTGGTTCTCCGTGTTGGCTGGCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp CCTTGGTCTGGTCACCAGGGCTTGGGAAGTCAGCAAAATCATTCTCTCCTTCCCTACCGCCCATCCACGTaGCTCTTGATTCGATCTTTG +
Preference number: 5 (lower is better)
Translates to: PWSGHQGLGSQQNHSLLPYRPST*LLIRSL
Trigger: CAAAGATCGAATCAAGAGCAACGTGGATGGGCGGTA...GGGAAGGAGAGAATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGACCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp TTCTCTACACTGAAGTTCTTAGGACAGCAGAGAACCCAAACTCAGTCCAAAGTACATGAGCCAGAGCCCTaGGGCCAACTTGACCCGCTT +
Preference number: 5 (lower is better)
Translates to: FSTLKFLGQQRTQTQSKVHEPEP*GQLDPL
Trigger: AAGCGGGTCAAGTTGGCCCAAGGGCTCTGGCTCATG...TACTTTGGACTGAGTTTGGGTTCTCTGCTGTCCTAAGAACTTCAGTGTAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp CAGGAAGATGGGCTATCTCAAAGAATCTCCTTTGATGCAGAAGCATTCCAGAAATCGGCTTCCACCTGGTaGCCCTTGCCCAGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QEDGLSQRISFDAEAFQKSASTW*PLPSFF
Trigger: GAAGAAGCTGGGCAAGGGCAACCAGGTGGAAGCCGA...TTTCTGGAATGCTTCTGCATCAAAGGAGATTCTTTGAGATAGCCCATCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp CCAAACTCAGTCCAAAGTAACCTATTCCCAAACACCATCGGTCAGAAGCAGAGGTCTGGTCACCAGGGCTaGGGAAGTCAGCAAAATCAT +
Preference number: 5 (lower is better)
Translates to: PNSVQSNLFPNTIGQKQRSGHQG*GSQQNH
Trigger: ATGATTTTGCTGACTTCCCAAGCCCTGGTGACCAGA...CCTCTGCTTCTGACCGATGGTGTTTGGGAATAGGTTACTTTGGACTGAGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp CCAAACTCAGTCCAAAGTAACCTATTCCCAAACACCATCGGTCAGAAGCAGAGGGGGTGTCCAAACATCTaGGATCTGGTCTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: PNSVQSNLFPNTIGQKQRGCPNI*DLVFCL
Trigger: CAAGCAGAAGACCAGATCCAAGATGTTTGGACACCC...CCTCTGCTTCTGACCGATGGTGTTTGGGAATAGGTTACTTTGGACTGAGTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp AACTTGGGACCAACGTCTGACAGGGTGTCCAAACATCTTGGATCTGGTCTTCTGATCCCTATCAATGAGTaGGGCACAAAATGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: NLGPTSDRVSKHLGSGLLIPINE*GTKWLS
Trigger: TGAGAGCCATTTTGTGCCCAACTCATTGATAGGGAT...CAGAAGACCAGATCCAAGATGTTTGGACACCCTGTCAGACGTTGGTCCCAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp TTCAACAACTGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTTTCCATCTGGCATACTaGGCTGGGTCCAGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: FNNCVSNAFRDPKLKFHRFHLAY*AGSRAS
Trigger: CGACGCCCTGGACCCAGCCAAGTATGCCAGATGGAA...ACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACAGTTGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp ATTCACATTAGCTTCATTCACATTTTGGGTCAGTCATTCAACAACTGTGTGTCAGCCGTTCTTGAGCCCTaGGCCCAGGGTGTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: IHISFIHILGQSFNNCVSAVLEP*AQGVLQ
Trigger: CTGGAGAACACCCTGGGCCAAGGGCTCAAGAACGGC...TGACACACAGTTGTTGAATGACTGACCCAAAATGTGAATGAAGCTAATGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp TTCAACAACTGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTCGTGGCGAGCTAGGATaGCAGCAGCTGAAAGGGACG +
Preference number: 5 (lower is better)
Translates to: FNNCVSNAFRDPKLKFHRRGELG*QQLKGT
Trigger: CGTCCCTTTCAGCTGCTGCAATCCTAGCTCGCCACG...ACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACAGTTGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp TGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTCAGGGAGAGTTCAGACTTTCGGAGTaGGATGAGGGGGAGATCCAC +
Preference number: 5 (lower is better)
Translates to: CVSNAFRDPKLKFHRQGEFRLSE*DEGEIH
Trigger: GTGGATCTCCCCCTCATCCAACTCCGAAAGTCTGAA...CTCTCCCTGACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CCA 90 bp ACACAGGATAGCACCCCCATCCCTATCAATGAGTTGGGCACAAAATaGCTCTCAGAATTATTCATCACATCGCTCCTCTTTCGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: TQDSTPIPINELGTK*LSELFITSLLFRSS
Trigger: TGAACTCCGAAAGAGGAGCGATGTGATGAATAATTCTGAGAGCCATTTTGTGCCCAACTCATTGATAGGGATGGGGGTGCTATCCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp TTCAACAACTGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTAGCCCTTGGGCCAACTaGACCCGCTTCTTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: FNNCVSNAFRDPKLKFHRSPWAN*TRFFWS
Trigger: TGACCAGAAGAAGCGGGTCAAGTTGGCCCAAGGGCT...ACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACAGTTGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp AGTCCATTATTCTTAGAAAAGCGTAACTTTCCCCCAACTTCTGGCATTAAGCAATACTTCATGCCGTTCTaGAGCCCTTGGCCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SPLFLEKRNFPPTSGIKQYFMPF*SPWPRV
Trigger: CACCCTGGGCCAAGGGCTCAAGAACGGCATGAAGTA...TTGCTTAATGCCAGAAGTTGGGGGAAAGTTACGCTTTTCTAAGAATAATGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp TTCTCTACACTGAAGTTCTTAGGACAGCAGAGAACCCAAACTCAGTCCAAAGTATTGTTGCCGCAGCATTaGAACTCGATCTGCAGCATG +
Preference number: 5 (lower is better)
Translates to: FSTLKFLGQQRTQTQSKVLLPQH*NSICSM
Trigger: CATGCTGCAGATCGAGTTCAAATGCTGCGGCAACAA...TACTTTGGACTGAGTTTGGGTTCTCTGCTGTCCTAAGAACTTCAGTGTAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp AACTTGGGACCAACGTCTGACAGGGTGTCCAAACATCTTGGATCTGGTCTTCTGAGCTTCATTCACATTTaGGGTCAGTCATTCAACAAC +
Preference number: 5 (lower is better)
Translates to: NLGPTSDRVSKHLGSGLLSFIHI*GQSFNN
Trigger: GTTGTTGAATGACTGACCCAAAATGTGAATGAAGCT...CAGAAGACCAGATCCAAGATGTTTGGACACCCTGTCAGACGTTGGTCCCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp AGACTTTCGGAGTTGGATGAGGGGGAGATCCACGTTTCTTGGAGTGCACTATTTATAAAATCCCCTGCCTaGAAATTCTCTTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: RLSELDEGEIHVSWSALFIKSPA*KFSCSM
Trigger: CATGGAGCAAGAGAATTTCAAGGCAGGGGATTTTAT...AAATAGTGCACTCCAAGAAACGTGGATCTCCCCCTCATCCAACTCCGAAAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp TTCTCTACACTGAAGTTCTTAGGACAGCAGAGAACCCAAACTCAGTCCAAAGTAGATCTGGTCTTCTGCTaGGGGGAATTAAGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: FSTLKFLGQQRTQTQSKVDLVFC*GELSPE
Trigger: TTCTGGGCTTAATTCCCCCAAGCAGAAGACCAGATC...TACTTTGGACTGAGTTTGGGTTCTCTGCTGTCCTAAGAACTTCAGTGTAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp GCTTATGCACCAAGTGACACTTTGGATAGAGTGAAGCAACATGGAGCTCATAAGAGGATTCCTTGCCCTTaGCTGTGGACAATTAGTGTT +
Preference number: 5 (lower is better)
Translates to: AYAPSDTLDRVKQHGAHKRIPCP*LWTISV
Trigger: AACACTAATTGTCCACAGCAAAGGGCAAGGAATCCT...CTTATGAGCTCCATGTTGCTTCACTCTATCCAAAGTGTCACTTGGTGCATAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp GCTTATGCACCAAGTGACACTTTGGATAGAGTGAAGCAACATGGAGCTCATAAGCTCAAAGAATCTCCTTaGATGCAGAAGCATTCCAGA +
Preference number: 5 (lower is better)
Translates to: AYAPSDTLDRVKQHGAHKLKESP*MQKHSR
Trigger: TCTGGAATGCTTCTGCATCAAAGGAGATTCTTTGAG...CTTATGAGCTCCATGTTGCTTCACTCTATCCAAAGTGTCACTTGGTGCATAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp TGTGTGTCAAATGCTTTTAGGGACCCTAAACTTAAATTCCACCGTCAGGGAGAGCTCTTGATTCGATCTTaGACTTCTTTGGAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: CVSNAFRDPKLKFHRQGELLIRS*TSLEEK
Trigger: CTTTTCCTCCAAAGAAGTCAAAGATCGAATCAAGAG...CTCTCCCTGACGGTGGAATTTAAGTTTAGGGTCCCTAAAAGCATTTGACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS-3UTR CAA 90 bp ATTCACATTAGCTTCATTCACATTTTGGGTCAGTCATTCAACAACTGTGTGTCAAGTATGGATCATTCCTaGGCCTCAACGAGATTCAGA +
Preference number: 5 (lower is better)
Translates to: IHISFIHILGQSFNNCVSSMDHS*ASTRFR
Trigger: TCTGAATCTCGTTGAGGCCAAGGAATGATCCATACT...TGACACACAGTTGTTGAATGACTGACCCAAAATGTGAATGAAGCTAATGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS GCA 72 bp CCTGGCCTGCGTCTGCGCCCTCGGCTTCCACCTGGTTaGCCTTGCCCAGCTTCTTCACACTCTCCAGAAAGG +
Preference number: 6 (lower is better)
Translates to: PGLRLRPRLPPG*PCPASSHSPER
Trigger: CCTTTCTGGAGAGTGTGAAGAAGCTGGGCAAGGGCAACCAGGTGGAAGCCGAGGGCGCAGACGCAGGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CAA 72 bp GCCTGGCCTGCGTCTGCGCCCTCGGCTTCCACCTGGTaGCCCTTGCCCAGCTTCTTCACACTCTCCAGAAAG +
Preference number: 6 (lower is better)
Translates to: AWPASAPSASTW*PLPSFFTLSRK
Trigger: CTTTCTGGAGAGTGTGAAGAAGCTGGGCAAGGGCAACCAGGTGGAAGCCGAGGGCGCAGACGCAGGCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS TCA 72 bp GGGTGTCTGTGTCCCGGTAGTACTTCATGCCGTTCTTaGGCCCTTGGCCCAGGGTGTTCTCCAGCGAGCCCC +
Preference number: 6 (lower is better)
Translates to: GCLCPGSTSCRS*ALGPGCSPASP
Trigger: GGGGCTCGCTGGAGAACACCCTGGGCCAAGGGCTCAAGAACGGCATGAAGTACTACCGGGACACAGACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CCA 72 bp CGGCTTCAGCCAGGGCTTCCATCTGGCATACTTGGCTaGGTCCAGGGCGTCGTAGCAGATCTTCCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: RLQPGLPSGILG*VQGVVADLPSQ
Trigger: CTGGCTGGGAAGATCTGCTACGACGCCCTGGACCCAGCCAAGTATGCCAGATGGAAGCCCTGGCTGAAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CCA 72 bp GCCAGCCCTGGCTCTCGCTCTCAGATTCCTCGGGGTTaGACACACCATCCAGCGACGTCTGTAGGTAGCGCA +
Preference number: 6 (lower is better)
Translates to: ASPGSRSQIPRG*THHPATSVGSA
Trigger: TGCGCTACCTACAGACGTCGCTGGATGGTGTGTCCAACCCCGAGGAATCTGAGAGCGAGAGCCAGGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CCA 72 bp AAAAGTGCAGATGGCCCAAGCTGTAGGGAGCTGCCCTaGGGGCTACCCATGTCGAGTCCCACTAGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: KSADGPSCRELP*GLPMSSPTSLG
Trigger: TCCCAGGCTAGTGGGACTCGACATGGGTAGCCCCCAGGGCAGCTCCCTACAGCTTGGGCCATCTGCACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CCA 72 bp GGTACGGCTTCAGCCAGGGCTTCCATCTGGCATACTTaGCTGGGTCCAGGGCGTCGTAGCAGATCTTCCCAG +
Preference number: 6 (lower is better)
Translates to: GTASARASIWHT*LGPGRRSRSSQ
Trigger: CTGGGAAGATCTGCTACGACGCCCTGGACCCAGCCAAGTATGCCAGATGGAAGCCCTGGCTGAAGCCGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CAA 72 bp TGTGTCCCGGTAGTACTTCATGCCGTTCTTGAGCCCTaGGCCCAGGGTGTTCTCCAGCGAGCCCCGAAGCAG +
Preference number: 6 (lower is better)
Translates to: CVPVVLHAVLEP*AQGVLQRAPKQ
Trigger: CTGCTTCGGGGCTCGCTGGAGAACACCCTGGGCCAAGGGCTCAAGAACGGCATGAAGTACTACCGGGACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CAA 90 bp AGGGGTGTCTGTGTCCCGGTAGTACTTCATGCCGTTCTTGAGCCCTaGGCCCAGGGTGTTCTCCAGCGAGCCCCGAAGCAGAAAGCAGCA +
Preference number: 6 (lower is better)
Translates to: RGVCVPVVLHAVLEP*AQGVLQRAPKQKAA
Trigger: TGCTGCTTTCTGCTTCGGGGCTCGCTGGAGAACACCCTGGGCCAAGGGCTCAAGAACGGCATGAAGTACTACCGGGACACAGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS TCA 72 bp CCAGGGCGTCGTAGCAGATCTTCCCAGCCAGCGAGTTaGAGACACAGGATAGCACCCCCATCCCTATCAATG +
Preference number: 6 (lower is better)
Translates to: PGRRSRSSQPAS*RHRIAPPSLSM
Trigger: CATTGATAGGGATGGGGGTGCTATCCTGTGTCTTCAACTCGCTGGCTGGGAAGATCTGCTACGACGCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CAA 90 bp AGCCAGAGCCCTTGGGCCAACTTGACCCGCTTCTTCTGGTCAAACTaGACTTTCAGTAGCGCCATGCTTGCCAAGTGTAGTCCGGGTTGC +
Preference number: 6 (lower is better)
Translates to: SQSPWANLTRFFWSN*TFSSAMLAKCSPGC
Trigger: GCAACCCGGACTACACTTGGCAAGCATGGCGCTACTGAAAGTCAAGTTTGACCAGAAGAAGCGGGTCAAGTTGGCCCAAGGGCTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS TCA 72 bp GAGCTCCTCCGTCTGGTGGTCGTAACTGTAGTGTGCTaGGTTGTTGGTGATCTGATACTGGATGCAGGGCCG +
Preference number: 6 (lower is better)
Translates to: ELLRLVVVTVVC*VVGDLILDAGP
Trigger: CGGCCCTGCATCCAGTATCAGATCACCAACAACTCAGCACACTACAGTTACGACCACCAGACGGAGGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CCA 72 bp AGCCAGAGCCCTTGGGCCAACTTGACCCGCTTCTTCTaGTCAAACTTGACTTTCAGTAGCGCCATGCTTGCC +
Preference number: 6 (lower is better)
Translates to: SQSPWANLTRFF*SNLTFSSAMLA
Trigger: GGCAAGCATGGCGCTACTGAAAGTCAAGTTTGACCAGAAGAAGCGGGTCAAGTTGGCCCAAGGGCTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CCA 72 bp GCCAACACGGAGAACCAGTTCATGAGCCAGAGCCCTTaGGCCAACTTGACCCGCTTCTTCTGGTCAAACTTG +
Preference number: 6 (lower is better)
Translates to: ANTENQFMSQSP*ANLTRFFWSNL
Trigger: CAAGTTTGACCAGAAGAAGCGGGTCAAGTTGGCCCAAGGGCTCTGGCTCATGAACTGGTTCTCCGTGTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CAA 90 bp GCCAACACGGAGAACCAGTTCATGAGCCAGAGCCCTTGGGCCAACTaGACCCGCTTCTTCTGGTCAAACTTGACTTTCAGTAGCGCCATG +
Preference number: 6 (lower is better)
Translates to: ANTENQFMSQSPWAN*TRFFWSNLTFSSAM
Trigger: CATGGCGCTACTGAAAGTCAAGTTTGACCAGAAGAAGCGGGTCAAGTTGGCCCAAGGGCTCTGGCTCATGAACTGGTTCTCCGTGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CAA 72 bp AGCCAACACGGAGAACCAGTTCATGAGCCAGAGCCCTaGGGCCAACTTGACCCGCTTCTTCTGGTCAAACTT +
Preference number: 6 (lower is better)
Translates to: SQHGEPVHEPEP*GQLDPLLLVKL
Trigger: AAGTTTGACCAGAAGAAGCGGGTCAAGTTGGCCCAAGGGCTCTGGCTCATGAACTGGTTCTCCGTGTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CAA 90 bp GATGATGCCAGCCAACACGGAGAACCAGTTCATGAGCCAGAGCCCTaGGGCCAACTTGACCCGCTTCTTCTGGTCAAACTTGACTTTCAG +
Preference number: 6 (lower is better)
Translates to: DDASQHGEPVHEPEP*GQLDPLLLVKLDFQ
Trigger: CTGAAAGTCAAGTTTGACCAGAAGAAGCGGGTCAAGTTGGCCCAAGGGCTCTGGCTCATGAACTGGTTCTCCGTGTTGGCTGGCATCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CAA 72 bp AAAGGGACGCCGTCCACCAGGTACCGCCCATCCACGTaGCTCTTGATTCGATCTTTGACTTCTTTGGAGGAA +
Preference number: 6 (lower is better)
Translates to: KGTPSTRYRPST*LLIRSLTSLEE
Trigger: TTCCTCCAAAGAAGTCAAAGATCGAATCAAGAGCAACGTGGATGGGCGGTACCTGGTGGACGGCGTCCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CAA 72 bp CCTTGGGCCAACTTGACCCGCTTCTTCTGGTCAAACTaGACTTTCAGTAGCGCCATGCTTGCCAAGTGTAGT +
Preference number: 6 (lower is better)
Translates to: PWANLTRFFWSN*TFSSAMLAKCS
Trigger: ACTACACTTGGCAAGCATGGCGCTACTGAAAGTCAAGTTTGACCAGAAGAAGCGGGTCAAGTTGGCCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS TCA 72 bp CAAACCAGTCCCGAAAACCGTTGTTGCCGCAGCATTTaGACTCGATCTGCAGCATGTCGATGGTCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: QTSPENRCCRSI*TRSAACRWSSS
Trigger: TGAAGAAGACCATCGACATGCTGCAGATCGAGTTCAAATGCTGCGGCAACAACGGTTTTCGGGACTGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CAA 72 bp TCAAACCAGTCCCGAAAACCGTTGTTGCCGCAGCATTaGAACTCGATCTGCAGCATGTCGATGGTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: SNQSRKPLLPQH*NSICSMSMVFF
Trigger: GAAGAAGACCATCGACATGCTGCAGATCGAGTTCAAATGCTGCGGCAACAACGGTTTTCGGGACTGGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS GCA 72 bp CGAAAACCGTTGTTGCCGCAGCATTTGAACTCGATCTaGAGCATGTCGATGGTCTTCTTCATGAAACACCTG +
Preference number: 6 (lower is better)
Translates to: RKPLLPQHLNSI*SMSMVFFMKHL
Trigger: CAGGTGTTTCATGAAGAAGACCATCGACATGCTGCAGATCGAGTTCAAATGCTGCGGCAACAACGGTTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CAA 90 bp AGCGAGTTGAAGACACAGGATAGCACCCCCATCCCTATCAATGAGTaGGGCACAAAATGGCTCTCAGAATTATTCATCACATCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: SELKTQDSTPIPINE*GTKWLSELFITSLL
Trigger: GAGGAGCGATGTGATGAATAATTCTGAGAGCCATTTTGTGCCCAACTCATTGATAGGGATGGGGGTGCTATCCTGTGTCTTCAACTCGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CCA 72 bp AGCACCCCCATCCCTATCAATGAGTTGGGCACAAAATaGCTCTCAGAATTATTCATCACATCGCTCCTCTTT +
Preference number: 6 (lower is better)
Translates to: STPIPINELGTK*LSELFITSLLF
Trigger: AAAGAGGAGCGATGTGATGAATAATTCTGAGAGCCATTTTGTGCCCAACTCATTGATAGGGATGGGGGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CCA 72 bp AGACACAGGATAGCACCCCCATCCCTATCAATGAGTTaGGCACAAAATGGCTCTCAGAATTATTCATCACAT +
Preference number: 6 (lower is better)
Translates to: RHRIAPPSLSMS*AQNGSQNYSSH
Trigger: ATGTGATGAATAATTCTGAGAGCCATTTTGTGCCCAACTCATTGATAGGGATGGGGGTGCTATCCTGTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7
CDS CAA 72 bp AAGACACAGGATAGCACCCCCATCCCTATCAATGAGTaGGGCACAAAATGGCTCTCAGAATTATTCATCACA +
Preference number: 6 (lower is better)
Translates to: KTQDSTPIPINE*GTKWLSELFIT
Trigger: TGTGATGAATAATTCTGAGAGCCATTTTGTGCCCAACTCATTGATAGGGATGGGGGTGCTATCCTGTGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230381.7