RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRPF40B (Homo sapiens)

Ensembl gene IDs: ENSG00000110844

Ensembl transcript IDs: ENST00000261897.5, ENST00000380281.5, ENST00000508736.1, ENST00000527253.2, ENST00000546626.1, ENST00000547764.1, ENST00000548399.1, ENST00000548436.5, ENST00000548825.7, ENST00000549547.1, ENST00000551063.5, ENST00000551111.1, ENST00000551269.1, ENST00000551320.1, ENST00000551418.5, ENST00000552301.1

Found 585 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACCCTTaGACACCAAGAGCAACCTTGAGAGGTGCCAACAATGGTGTGCTG +
Preference number: 1 (lower is better)
Translates to: GLRARTALVQGVGDP*TPRATLRGANNGVL
Trigger: CAGCACACCATTGTTGGCACCTCTCAAGGTTGCTCTTGGTGTTCAAGGGTCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR CAA 90 bp GGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACCCTaGAACACCAAGAGCAACCTTGAGAGGTGCCAACAATGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: GAEGKDCTSPGSRGP*NTKSNLERCQQWCA
Trigger: AGCACACCATTGTTGGCACCTCTCAAGGTTGCTCTTGGTGTTCAAGGGTCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR TCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACACCAAGAGCAACCTTaGGAGGTGCCAACAATGGTG +
Preference number: 2 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGHQEQP*EVPTMV
Trigger: CACCATTGTTGGCACCTCTCAAGGTTGCTCTTGGTG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGGAGTAGGGGACCCTTaGACACCAAGAGCAACCTTG +
Preference number: 2 (lower is better)
Translates to: WHIPPISGLGLRARTALVGVGDP*TPRATL
Trigger: CAAGGTTGCTCTTGGTGTTCAAGGGTCCCCTACTCC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCAGCAACCTTGAGAGGTaGCAACAATGGTGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: WHIPPISGLGLRARTALVSNLER*QQWCAG
Trigger: CCCAGCACACCATTGTTGGCACCTCTCAAGGTTGCT...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR CCA 90 bp CAGCTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGACTTGTGTCTTCGGGCCGGAGAGATGGTaGGGGCAGCTCCTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: QLSPQGLSHSQDYSTCVFGPERW*GQLLFF
Trigger: GAAGAAGAGGAGCTGCCCCCACCATCTCTCCGGCCC...GAAGACACAAGTCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549547.1
3UTR-3UTR TCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCACCAAGAGCAACCTTaGGAGGTGCCAACAATGGTG +
Preference number: 2 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSHQEQP*EVPTMV
Trigger: CACCATTGTTGGCACCTCTCAAGGTTGCTCTTGGTG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR TCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACACCAAGAGCAACCTTaGGAGGTGCCAACAATGGTG +
Preference number: 2 (lower is better)
Translates to: TWHIPPISGLGLRARTALHQEQP*EVPTMV
Trigger: CACCATTGTTGGCACCTCTCAAGGTTGCTCTTGGTG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGTGCCAACAATGGTGTaGTGGGGGTGGGGTTACTTT +
Preference number: 2 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSVPTMV*WGWGYF
Trigger: AAAGTAACCCCACCCCCAGCACACCATTGTTGGCAC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGCCAACAATGGTGTaGTGGGGGTGGGGTTACTTT +
Preference number: 2 (lower is better)
Translates to: TWHIPPISGLGLRARTALVPTMV*WGWGYF
Trigger: AAAGTAACCCCACCCCCAGCACACCATTGTTGGCAC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCCAACAATGGTGTGCTaGGGGTGGGGTTACTTTAGA +
Preference number: 2 (lower is better)
Translates to: WHIPPISGLGLRARTALVPTMVC*GWGYFR
Trigger: TCTAAAGTAACCCCACCCCCAGCACACCATTGTTGG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAACAATGGTGTGCTaGGGGTGGGGTTACTTTAGA +
Preference number: 2 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSPTMVC*GWGYFR
Trigger: TCTAAAGTAACCCCACCCCCAGCACACCATTGTTGG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTATGGTGTGCTGGGGGTaGGGTTACTTTAGAAAAAGT +
Preference number: 2 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSMVCWG*GYFRKS
Trigger: ACTTTTTCTAAAGTAACCCCACCCCCAGCACACCAT...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAATGGTGTGCTGGGGGTaGGGTTACTTTAGAAAAAGT +
Preference number: 2 (lower is better)
Translates to: TWHIPPISGLGLRARTALMVCWG*GYFRKS
Trigger: ACTTTTTCTAAAGTAACCCCACCCCCAGCACACCAT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR GCA 90 bp AGCTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGACTTGTGTCTTCTCCGAAGGCCATGATCTaGTCCAAGAAGATGGGAGGA +
Preference number: 2 (lower is better)
Translates to: SFLLRVCLTLRTIRLVSSPKAMI*SKKMGG
Trigger: TCCTCCCATCTTCTTGGAGCAGATCATGGCCTTCGG...AGAAGACACAAGTCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
3UTR-3UTR CAA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGGGAGTAGGGGACCCTaGAACACCAAGAGCAACCTT +
Preference number: 3 (lower is better)
Translates to: WHIPPISGLGLRARTALVGSRGP*NTKSNL
Trigger: AAGGTTGCTCTTGGTGTTCAAGGGTCCCCTACTCCC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGGGAGTAGGGGACCCTaGAACACCAAGAGCAACCTT +
Preference number: 3 (lower is better)
Translates to: TWHIPPISGLGLRARTALGSRGP*NTKSNL
Trigger: AAGGTTGCTCTTGGTGTTCAAGGGTCCCCTACTCCC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGGGAGTAGGGGACCCTaGAACACCAAGAGCAACCTT +
Preference number: 3 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSGSRGP*NTKSNL
Trigger: AAGGTTGCTCTTGGTGTTCAAGGGTCCCCTACTCCC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR CAA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCACACCAAGAGCAACCTaGAGAGGTGCCAACAATGGT +
Preference number: 3 (lower is better)
Translates to: WHIPPISGLGLRARTALVTPRAT*RGANNG
Trigger: ACCATTGTTGGCACCTCTCAAGGTTGCTCTTGGTGT...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR TCA 72 bp GCAAGGACTGCACTAGTCCAGGGAGTAGGGGACCCTTaGACACCAAGAGCAACCTTGAGAGGTGCCAACAAT +
Preference number: 3 (lower is better)
Translates to: ARTALVQGVGDP*TPRATLRGANN
Trigger: ATTGTTGGCACCTCTCAAGGTTGCTCTTGGTGTTCAAGGGTCCCCTACTCCCTGGACTAGTGCAGTCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAACACCAAGAGCAACCTaGAGAGGTGCCAACAATGGT +
Preference number: 3 (lower is better)
Translates to: TWHIPPISGLGLRARTALTPRAT*RGANNG
Trigger: ACCATTGTTGGCACCTCTCAAGGTTGCTCTTGGTGT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAGCGCCGCATCCTGCGTaGCTCCTCCTTCTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGAPHPA*LLLLPL
Trigger: GAGCGGGAGAAGGAGGAGGCACGCAGGATGCGGCGC...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACCCTGCGCCGCATCCTaGGTGCCTCCTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGPCAAS*VPPPSP
Trigger: GGGAGAAGGAGGAGGCACGCAGGATGCGGCGCAGGG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACAGCCACAGCAGAGCTaGCGGTGTCCGCACCCGGAG +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGQPQQS*RCPHPE
Trigger: CTCCGGGTGCGGACACCGCCAGCTCTGCTGTGGCTG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGAGGCCTGTGGGCACTaGGGTGGGGCCAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVEACGH*GGARRH
Trigger: GTGCCTCCTGGCCCCACCCCAGTGCCCACAGGCCTC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAGGGGTGGAGCCCGGCTaGCCCAGCATGTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGGVEPG*PSMLAK
Trigger: CTTTGCCAACATGCTGGGCCAGCCGGGCTCCACCCC...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATCCCTGGAGGGGGCATaGAGGGTGGTGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGSLEGA*RVVASW
Trigger: CCATGATGCCACCACCCTTCATGCCCCCTCCAGGGA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAACCCGGAGCCGTCGCTaGGGTGACAGGCACCGCTGG +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALTRSRR*GDRHRW
Trigger: CCAGCGGTGCCTGTCACCGCAGCGACGGCTCCGGGT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACCCTCCTCCAGCTGCTaGAGGAACCCCTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGPSSSC*RNPCSR
Trigger: CCTGGAACAGGGGTTCCTGCAGCAGCTGGAGGAGGG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATTGCGGCGCCGGAGCTaGTTGGCCTGTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGLRRRS*LACSFS
Trigger: GGAGAAGGAACAGGCCAAGCAGCTCCGGCGCCGCAA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCAACGGGCGCTGGGGCTaGGGGAAGGGCATGTCGCAC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVNGRWG*GKGMSH
Trigger: GTGCGACATGCCCTTCCCCCAGCCCCAGCGCCCGTT...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGCCACAGCAGAGCTaGCGGTGTCCGCACCCGGAG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVQPQQS*RCPHPE
Trigger: CTCCGGGTGCGGACACCGCCAGCTCTGCTGTGGCTG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGAGGCCTGTGGGCACTaGGGTGGGGCCAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALEACGH*GGARRH
Trigger: GTGCCTCCTGGCCCCACCCCAGTGCCCACAGGCCTC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAATAAGTCCAGAGGGGTaGAGCCCGGCTGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGISPEG*SPAGPA
Trigger: TGCTGGGCCAGCCGGGCTCCACCCCTCTGGACTTAT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAGGGCCGGAGAGATGGTaGGGGCAGCTCCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGGPERW*GQLLFF
Trigger: GAAGAAGAGGAGCTGCCCCCACCATCTCTCCGGCCC...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp GGGCAGCACCCCCACTTTCAACTGAATCAAGTGAGGAAGAGGGCTCAGAGCCTGTCCGCCTCCTCCGCTTaGGGGGCCGGAGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: GQHPHFQLNQVRKRAQSLSASSA*GAGEMV
Trigger: CACCATCTCTCCGGCCCCCCAAGCGGAGGAGGCGGA...CAGGCTCTGAGCCCTCTTCCTCACTTGATTCAGTTGAAAGTGGGGGTGCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR TCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGAGCCGTCGCTGCGGTaGCAGGCACCGCTGGCATCA +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSEPSLR*QAPLAS
Trigger: TGATGCCAGCGGTGCCTGTCACCGCAGCGACGGCTC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACCCGGTTGCTCCAACTaGGGCCAGACCTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGPGCSN*GQTSLV
Trigger: AACCAGAGAGGTCTGGCCTCAGTTGGAGCAACCGGG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACCATCTGGGGCCACATaGTCACTCCATAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGPSGAT*SLHRAL
Trigger: GAGGGCCCTATGGAGTGAGCATGTGGCCCCAGATGG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATTAGGGCCTGGATATTaGGGCGCCGGAGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGLGPGY*GAGAAW
Trigger: CCAAGCAGCTCCGGCGCCGCAATATCCAGGCCCTAA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAAGGCCTCCCGATTCTTaGGTTGTTGGCGTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGRPPDS*VVGVAP
Trigger: GGGAGCGACGCCAACAACGCAAGAATCGGGAGGCCT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACAGCTTGATGTTGCCTaGGTCCAGTGCGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGQLDVA*VQCGSP
Trigger: AGGGCTGCCGCACTGGACGCAGGCAACATCAAGCTG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGCGCCGCATCCTGCGTaGCTCCTCCTTCTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALAPHPA*LLLLPL
Trigger: GAGCGGGAGAAGGAGGAGGCACGCAGGATGCGGCGC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACCCTGCGCCGCATCCTaGGTGCCTCCTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALPCAAS*VPPPSP
Trigger: GGGAGAAGGAGGAGGCACGCAGGATGCGGCGCAGGG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACCTCTTCCCAGGCAGTaGCTAGCTCCAGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGPLPRQ*LAPEQA
Trigger: TGCCTGCTCTGGAGCTAGGCACTGCCTGGGAAGAGG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAGTGGTCTCTGACTCATaGGGGGTAGCCCCATCGGAG +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGVVSDS*GVAPSE
Trigger: CTCCGATGGGGCTACCCCCCATGAGTCAGAGACCAC...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATGGCGCCCCCATTGGTaGAAGCATTGGGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGWRPHW*KHWGQD
Trigger: ATCCTGCCCCCAATGCTTCCACCAATGGGGGCGCCA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACTGTGTGAGTGGTGGTaGCGCCCCCATTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGLCEWW*RPHWWK
Trigger: CTTCCACCAATGGGGGCGCCACCACCACTCACACAG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGCCAGGAGGCACAGGTaGGGGGTCAGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSARRHR*GVRLWL
Trigger: CAGCCACAGCCTGACCCCCCACCTGTGCCTCCTGGC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATCTGCTTGGCCTCTTTaGCCCTTAGCCGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGSAWPL*PLAGPP
Trigger: AGGAGGCCCGGCTAAGGGCCAAAGAGGCCAAGCAGA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTATCCGCCTCCTCCGCTTaGGGGGCCGGAGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALSASSA*GAGEMV
Trigger: CACCATCTCTCCGGCCCCCCAAGCGGAGGAGGCGGA...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTCCGCCTCCTCCGCTTaGGGGGCCGGAGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSSASSA*GAGEMV
Trigger: CACCATCTCTCCGGCCCCCCAAGCGGAGGAGGCGGA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATGGAGGAAGAAGTGGTaGAGCCTCAGGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGWRKKW*SLRARA
Trigger: TGCCCTGGCCCTGAGGCTCCACCACTTCTTCCTCCA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAGGACAGGAGCAGCTCTaGCTTGGACTTGAGCACGCT +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGGQEQL*LGLEHA
Trigger: AGCGTGCTCAAGTCCAAGGCAGAGCTGCTCCTGTCC...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCCCTCCTCCAGCTGCTaGAGGAACCCCTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVPSSSC*RNPCSR
Trigger: CCTGGAACAGGGGTTCCTGCAGCAGCTGGAGGAGGG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAAGCTGCCCTGTCTCATaGAGCTCGTCCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGSCPVS*SSSRKV
Trigger: GACCTTCCTGGACGAGCTGCATGAGACAGGGCAGCT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAACGGTTAGGGAGCTCTaGCTGTTGGAGCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGTVREL*LLELPV
Trigger: GACAGGGAGCTCCAACAGGCAGAGCTCCCTAACCGT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTGGTGGCGCCCCCATTaGTGGAAGCATTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVWWRPH*WKHWGQ
Trigger: CTGCCCCCAATGCTTCCACCAATGGGGGCGCCACCA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAGTAGATGCGCCCATCTaGGGCCACATGCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGVDAPI*GHMLTP
Trigger: TGGAGTGAGCATGTGGCCCCAGATGGGCGCATCTAC...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGGTCATCCAGATCCTTaGGCCGGGTCCAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVGHPDP*AGSSGT
Trigger: AGTCCCGCTGGACCCGGCCCAAGGATCTGGATGACC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGCTGTCCAGAACTGCTaGGGCCCTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVAVQNC*GPPPAA
Trigger: AGCAGCTGGAGGAGGGCCCCAGCAGTTCTGGACAGC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCCCGCCGGTAGCGGGTaGTGGAGGTCATGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVPAGSG*WRSCVH
Trigger: ATGAACGCATGACCTCCACCACCCGCTACCGGCGGG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAATGCTCTTTAGGGCCTaGATATTGCGGCGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGMLFRA*ILRRRS
Trigger: GCTCCGGCGCCGCAATATCCAGGCCCTAAAGAGCAT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATCCATGAGGTACTGCTaGGCCTGGGACCACGTGGTT +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGSMRYC*AWDHVV
Trigger: AACCACGTGGTCCCAGGCCCAGCAGTACCTCATGGA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGGGGTGGAGCCCGGCTaGCCCAGCATGTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALGVEPG*PSMLAK
Trigger: CTTTGCCAACATGCTGGGCCAGCCGGGCTCCACCCC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGGGCCGGAGAGATGGTaGGGGCAGCTCCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVGPERW*GQLLFF
Trigger: GAAGAAGAGGAGCTGCCCCCACCATCTCTCCGGCCC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTTCCTGGTATCTGTGTaGGTGGTGGTGGCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVFLVSV*VVVAPP
Trigger: TGGGGGCGCCACCACCACTCACACAGATACCAGGAA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGCTCTGCCTTGGACTTaGGCACGCTGGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSALPWT*ARWASP
Trigger: GGGAGAAGCCCAGCGTGCTCAAGTCCAAGGCAGAGC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGCTCTGCCTTGGACTTaGGCACGCTGGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALALPWT*ARWASP
Trigger: GGGAGAAGCCCAGCGTGCTCAAGTCCAAGGCAGAGC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCATGGCCTGTTCCCATaGGGCATTGGAGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVHGLFP*GIGGDS
Trigger: GCTGTCCCCTCCAATGCCTCATGGGAACAGGCCATG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTACCCGGAGCCGTCGCTaGGGTGACAGGCACCGCTGG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGTRSRR*GDRHRW
Trigger: CCAGCGGTGCCTGTCACCGCAGCGACGGCTCCGGGT...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGTCTGTGGCAGCTGCTaGTGCTGTTTCCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVVCGSC*CCFPAA
Trigger: GGCTGCAGGGAAACAGCAGCAGCAGCTGCCACAGAC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCCTCCTCCAGCTGCTaGAGGAACCCCTGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSPSSSC*RNPCSR
Trigger: CCTGGAACAGGGGTTCCTGCAGCAGCTGGAGGAGGG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACAGGTGGACATAGAGTaGAGCTGCCCTGTCTCATGC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGQVDIE*SCPVSC
Trigger: GCATGAGACAGGGCAGCTGCACTCTATGTCCACCTG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGCTTGATGTTGCCTaGGTCCAGTGCGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVQLDVA*VQCGSP
Trigger: AGGGCTGCCGCACTGGACGCAGGCAACATCAAGCTG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGAAAGGCAGCTTCCCTaGGCCGCATCCTGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSERQLP*AASCVP
Trigger: AGGCACGCAGGATGCGGCGCAGGGAAGCTGCCTTTC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGAAAGGCAGCTTCCCTaGGCCGCATCCTGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALERQLP*AASCVP
Trigger: AGGCACGCAGGATGCGGCGCAGGGAAGCTGCCTTTC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TCAACTGAATCAAGTGAGGAAGAGGGCTCAGAGCCTGACTCTGAGGGGTTCCGCGAAAGGCAGCTTCCCTaGGCCGCATCCTGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: STESSEEEGSEPDSEGFRERQLP*AASCVP
Trigger: AGGCACGCAGGATGCGGCGCAGGGAAGCTGCCTTTC...GCGGAACCCCTCAGAGTCAGGCTCTGAGCCCTCTTCCTCACTTGATTCAGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCCTCTTCCCAGGCAGTaGCTAGCTCCAGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVPLPRQ*LAPEQA
Trigger: TGCCTGCTCTGGAGCTAGGCACTGCCTGGGAAGAGG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACCTTTGGTGTGGAGGTaGTGGCATTCAGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGPLVWR*WHSVCS
Trigger: GGAGCAGACTGAATGCCAGCACCTCCACACCAAAGG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261897.5
ENST00000380281.5
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTGGTGGCGCCCCCATTaGTGGAAGCATTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSWWRPH*WKHWGQ
Trigger: CTGCCCCCAATGCTTCCACCAATGGGGGCGCCACCA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCTGTGTGAGTGGTGGTaGCGCCCCCATTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVLCEWW*RPHWWK
Trigger: CTTCCACCAATGGGGGCGCCACCACCACTCACACAG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATCTTTCCAGGGACATTaGGACAGGAGCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGSFQGH*DRSSSA
Trigger: GGCAGAGCTGCTCCTGTCCCAATGTCCCTGGAAAGA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGGTCATCCAGATCCTTaGGCCGGGTCCAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSGHPDP*AGSSGT
Trigger: AGTCCCGCTGGACCCGGCCCAAGGATCTGGATGACC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGAGGCCTGTGGGCACTaGGGTGGGGCCAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGEACGH*GGARRH
Trigger: GTGCCTCCTGGCCCCACCCCAGTGCCCACAGGCCTC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAGTTCCAGGGGCTGGGTaGCCTCCAACACATCACAAT +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGVPGAG*PPTHHN
Trigger: ATTGTGATGTGTTGGAGGCCACCCAGCCCCTGGAAC...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGCTGTCCAGAACTGCTaGGGCCCTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSAVQNC*GPPPAA
Trigger: AGCAGCTGGAGGAGGGCCCCAGCAGTTCTGGACAGC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGCTGTCCAGAACTGCTaGGGCCCTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALAVQNC*GPPPAA
Trigger: AGCAGCTGGAGGAGGGCCCCAGCAGTTCTGGACAGC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTCTGCTTGGCCTCTTTaGCCCTTAGCCGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVSAWPL*PLAGPP
Trigger: AGGAGGCCCGGCTAAGGGCCAAAGAGGCCAAGCAGA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGCCGGTAGCGGGTGGTaGAGGTCATGCGTTCATGCT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVAGSGW*RSCVHA
Trigger: AGCATGAACGCATGACCTCCACCACCCGCTACCGGC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGGCGCCGGAGCTGCTTaGCCTGTTCCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVGAGAA*PVPSPS
Trigger: AGAAGGAGAAGGAACAGGCCAAGCAGCTCCGGCGCC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATCGTCCAGGAAGGTCTaGAAGGCCTCCCGATTCTTG +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGSSRKV*KASRFL
Trigger: CAAGAATCGGGAGGCCTTCCAGACCTTCCTGGACGA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAATAAGTCCAGAGGGGTaGAGCCCGGCTGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALISPEG*SPAGPA
Trigger: TGCTGGGCCAGCCGGGCTCCACCCCTCTGGACTTAT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGGGCCGGAGAGATGGTaGGGGCAGCTCCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSGPERW*GQLLFF
Trigger: GAAGAAGAGGAGCTGCCCCCACCATCTCTCCGGCCC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGGGTGGAGGAAGAAGTaGTGGAGCCTCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALGWRKK*WSLRAR
Trigger: CCTGGCCCTGAGGCTCCACCACTTCTTCCTCCACCC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGGGTGGAGGAAGAAGTaGTGGAGCCTCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSGWRKK*WSLRAR
Trigger: CCTGGCCCTGAGGCTCCACCACTTCTTCCTCCACCC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTCCTCCTGCTGTGGCTaGTGCTGTCCAGAACTGCTG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVSSCCG*CCPELL
Trigger: CAGCAGTTCTGGACAGCATCAGCCACAGCAGGAGGA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACCCGGTTGCTCCAACTaGGGCCAGACCTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALPGCSN*GQTSLV
Trigger: AACCAGAGAGGTCTGGCCTCAGTTGGAGCAACCGGG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACATGGCCTGTTCCCATaGGGCATTGGAGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALHGLFP*GIGGDS
Trigger: GCTGTCCCCTCCAATGCCTCATGGGAACAGGCCATG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTGTAACGGGGGTCGGTaGCCACCATCTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVCNGGR*PPSSWP
Trigger: AGGCCATGAAGATGGTGGTCACCGACCCCCGTTACA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAAGCGGACATCAGTGCTaGCTGCTGGATATAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGSGHQC*LLDIAP
Trigger: TGGAGCTATATCCAGCAGTCAGCACTGATGTCCGCT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGCTCCGACTCCAGGGTaGTCTGCTCAAAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVAPTPG*SAQRLS
Trigger: ACTCAGCCTTTGAGCAGATCACCCTGGAGTCGGAGC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAACTCAGCTCACTTTCTaGCGTGTCCCAGCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGTQLTF*RVPACL
Trigger: AAGACAGGCTGGGACACGTCAGAAAGTGAGCTGAGT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATCATTGGGTCACTGGTaGTCATCCAGCTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGSLGHW*SSSCCR
Trigger: CCTACAGCAGCTGGATGATCACCAGTGACCCAATGA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCATCTGGGGCCACATaGTCACTCCATAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSPSGAT*SLHRAL
Trigger: GAGGGCCCTATGGAGTGAGCATGTGGCCCCAGATGG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTGTGGCAGCTGCTGCTaGTGTTTCCCTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVCGSCC*CFPAAS
Trigger: AGAGGCTGCAGGGAAACAGCAGCAGCAGCTGCCACA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGTCTGTGGCAGCTGCTaGTGCTGTTTCCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSVCGSC*CCFPAA
Trigger: GGCTGCAGGGAAACAGCAGCAGCAGCTGCCACAGAC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTGTGGCAGCTGCTaGTGCTGTTTCCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALVCGSC*CCFPAA
Trigger: GGCTGCAGGGAAACAGCAGCAGCAGCTGCCACAGAC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACTTGAATGCCTGCTTTaGCTTCTCCCGGTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGLECLL*LLPVAP
Trigger: TGGAGCAACCGGGAGAAGGCAAAGCAGGCATTCAAG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTTAGGGCCTGGATATTaGGGCGCCGGAGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSLGPGY*GAGAAW
Trigger: CCAAGCAGCTCCGGCGCCGCAATATCCAGGCCCTAA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAAGGCCTCCCGATTCTTaGGTTGTTGGCGTCGCTCCC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALRPPDS*VVGVAP
Trigger: GGGAGCGACGCCAACAACGCAAGAATCGGGAGGCCT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCAGCTGCCCTGTCTCATaGAGCTCGTCCAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVSCPVS*SSSRKV
Trigger: GACCTTCCTGGACGAGCTGCATGAGACAGGGCAGCT...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGCGCCGCATCCTGCGTaGCTCCTCCTTCTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGAPHPA*LLLLPL
Trigger: GAGCGGGAGAAGGAGGAGGCACGCAGGATGCGGCGC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp GCTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGACTTGTGTCTTCTCGCGCCGCATCCTGCGTaGCTCCTCCTTCTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: AFSSGSVSLSGLFDLCLLAPHPA*LLLLPL
Trigger: GAGCGGGAGAAGGAGGAGGCACGCAGGATGCGGCGC...GAGAAGACACAAGTCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR GCA 90 bp CCAGCTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGACTTGTGTCTTCCCTGCGCCGCATCCTaGGTGCCTCCTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PAFSSGSVSLSGLFDLCLPCAAS*VPPPSP
Trigger: GGGAGAAGGAGGAGGCACGCAGGATGCGGCGCAGGG...AAGACACAAGTCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR GCA 90 bp TCAACTGAATCAAGTGAGGAAGAGGGCTCAGAGCCTGACTCTGAGGGGTTCCGCCCTCTTCCCAGGCAGTaGCTAGCTCCAGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: STESSEEEGSEPDSEGFRPLPRQ*LAPEQA
Trigger: TGCCTGCTCTGGAGCTAGGCACTGCCTGGGAAGAGG...GCGGAACCCCTCAGAGTCAGGCTCTGAGCCCTCTTCCTCACTTGATTCAGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAGCTTCTTGCCTTTCCTaGCATGCTTTCGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGASCLS*HAFGLW
Trigger: CCAAAGGCCGAAAGCATGGCAGGAAAGGCAAGAAGC...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACCGAAGGCCATGATCTaGTCCAAGAAGATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGPKAMI*SKKMGG
Trigger: TCCTCCCATCTTCTTGGAGCAGATCATGGCCTTCGG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCACGGTTAGGGAGCTCTaGCTGTTGGAGCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVTVREL*LLELPV
Trigger: GACAGGGAGCTCCAACAGGCAGAGCTCCCTAACCGT...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAGTGCCAACAATGGTGTaGTGGGGGTGGGGTTACTTT +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGVPTMV*WGWGYF
Trigger: AAAGTAACCCCACCCCCAGCACACCATTGTTGGCAC...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTCTCTTCCCTCACCCTTaGCCTCCCTCGCCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGLFPHP*PPSPSP
Trigger: CGGGGAGGGCGAGGGAGGCCAAGGGTGAGGGAAGAG...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTGTGTGAGTGGTGGTaGCGCCCCCATTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSLCEWW*RPHWWK
Trigger: CTTCCACCAATGGGGGCGCCACCACCACTCACACAG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTATCTGTGTGAGTGGTaGTGGCGCCCCCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVYLCEW*WRPHWW
Trigger: CCACCAATGGGGGCGCCACCACCACTCACACAGATA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACGGAGGTACCATTCCTaGTATCTGTGTGAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGRRYHS*YLCEWW
Trigger: CCACCACTCACACAGATACCAGGAATGGTACCTCCG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTCAGCCACAGCAGAGCTaGCGGTGTCCGCACCCGGAG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGQPQQS*RCPHPE
Trigger: CTCCGGGTGCGGACACCGCCAGCTCTGCTGTGGCTG...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATGGCTGAAGTGTCTGTaGCAGCTGCTGCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGWLKCL*QLLLLF
Trigger: AAACAGCAGCAGCAGCTGCCACAGACACTTCAGCCA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTGGCTGAGGTGGCTGTaGCTGAAGTGTCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVWLRWL*LKCLWQ
Trigger: CTGCCACAGACACTTCAGCCACAGCCACCTCAGCCA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCAGGCTGTGGCTGAGGTaGCTGTGGCTGAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVRLWLR*LWLKCL
Trigger: CAGACACTTCAGCCACAGCCACCTCAGCCACAGCCT...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGCCAGGAGGCACAGGTaGGGGGTCAGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGARRHR*GVRLWL
Trigger: CAGCCACAGCCTGACCCCCCACCTGTGCCTCCTGGC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGTTCCCATGAGGCATTaGAGGGGACAGCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVVPMRH*RGQPCP
Trigger: GGGACAAGGCTGTCCCCTCCAATGCCTCATGGGAAC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGCCGGTAGCGGGTGGTaGAGGTCATGCGTTCATGCT +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALAGSGW*RSCVHA
Trigger: AGCATGAACGCATGACCTCCACCACCCGCTACCGGC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGGCGCCGGAGCTGCTTaGCCTGTTCCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSGAGAA*PVPSPS
Trigger: AGAAGGAGAAGGAACAGGCCAAGCAGCTCCGGCGCC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATTTCGGCCTTTGGTGTaGAGGTGCTGGCATTCAGTC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGFRPLV*RCWHSV
Trigger: GACTGAATGCCAGCACCTCCACACCAAAGGCCGAAA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTCCGCCTCCTCCGCTTaGGGGGCCGGAGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGSASSA*GAGEMV
Trigger: CACCATCTCTCCGGCCCCCCAAGCGGAGGAGGCGGA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTGGAGGAAGAAGTGGTaGAGCCTCAGGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSWRKKW*SLRARA
Trigger: TGCCCTGGCCCTGAGGCTCCACCACTTCTTCCTCCA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAACATTAGGTCCTGGGTaGAGGAAGAAGTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGTLGPG*RKKWWS
Trigger: GCTCCACCACTTCTTCCTCCACCCAGGACCTAATGT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGAGTCGTTAGTTTGTTaGTGGCCTGGGCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSESLVC*WPGLGA
Trigger: GGCTCCCAGCCCAGGCCATCAACAAACTAACGACTC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS-3UTR TCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTCCTCCTGCTGTGGCTaGTGCTGTCCAGAACTGCTG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSSSCCG*CCPELL
Trigger: CAGCAGTTCTGGACAGCATCAGCCACAGCAGGAGGA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGGACAGGAGCAGCTCTaGCTTGGACTTGAGCACGCT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSGQEQL*LGLEHA
Trigger: AGCGTGCTCAAGTCCAAGGCAGAGCTGCTCCTGTCC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTGTGGCAGCTGCTGCTaGTGTTTCCCTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSCGSCC*CFPAAS
Trigger: AGAGGCTGCAGGGAAACAGCAGCAGCAGCTGCCACA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGGGTGGTGGAGGTCATaGGTTCATGCTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALGWWRS*VHAAPG
Trigger: TCCTGGAGCAGCATGAACGCATGACCTCCACCACCC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTTATCCATGAGGTACTaGTGGGCCTGGGACCACGTG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVLSMRY*WAWDHV
Trigger: CACGTGGTCCCAGGCCCAGCAGTACCTCATGGATAA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTGCCTGCGTCCAGTaGGGCAGCCCTCTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALVACVQ*GSPLVK
Trigger: TTTGACAAGAGGGCTGCCGCACTGGACGCAGGCAAC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TCAACTGAATCAAGTGAGGAAGAGGGCTCAGAGCCTGACTCTGAGGGGTTCCGCGTTGCCTGCGTCCAGTaGGGCAGCCCTCTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: STESSEEEGSEPDSEGFRVACVQ*GSPLVK
Trigger: TTTGACAAGAGGGCTGCCGCACTGGACGCAGGCAAC...GCGGAACCCCTCAGAGTCAGGCTCTGAGCCCTCTTCCTCACTTGATTCAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCAGAGCAGGCACAGCCTaGCTCAGCATGCTTCGAAAG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVRAGTA*LSMLRK
Trigger: CTTTCGAAGCATGCTGAGGCAGGCTGTGCCTGCTCT...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCCTTTGGTGTGGAGGTaGTGGCATTCAGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVPLVWR*WHSVCS
Trigger: GGAGCAGACTGAATGCCAGCACCTCCACACCAAAGG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261897.5
ENST00000380281.5
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCCTTTGGTGTGGAGGTaGTGGCATTCAGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVPLVWR*WHSVSS
Trigger: GCTGGAGACTGAATGCCAGCACCTCCACACCAAAGG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTAAAGGGAACGGGCGCTaGGGCTGGGGGAAGGGCATG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGKGNGR*GWGKGM
Trigger: CATGCCCTTCCCCCAGCCCCAGCGCCCGTTCCCTTT...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTGATGGCCTGGGCTaGGAGCCCCTTTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALVDGLG*EPLSSE
Trigger: CTCTGAAGAAAGGGGCTCCCAGCCCAGGCCATCAAC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTATCTGTGTGAGTGGTaGTGGCGCCCCCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSYLCEW*WRPHWW
Trigger: CCACCAATGGGGGCGCCACCACCACTCACACAGATA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTGGTATCTGTGTGAGTaGTGGTGGCGCCCCCATTGG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSWYLCE*WWRPHW
Trigger: CCAATGGGGGCGCCACCACCACTCACACAGATACCA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTATGGTATCTGTGTGAGTaGTGGTGGCGCCCCCATTGG +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALWYLCE*WWRPHW
Trigger: CCAATGGGGGCGCCACCACCACTCACACAGATACCA...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTAGATGCGCCCATCTaGGGCCACATGCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALVDAPI*GHMLTP
Trigger: TGGAGTGAGCATGTGGCCCCAGATGGGCGCATCTAC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGTAGATGCGCCCATCTaGGGCCACATGCTCACTCCA +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSVDAPI*GHMLTP
Trigger: TGGAGTGAGCATGTGGCCCCAGATGGGCGCATCTAC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTGGCTGAGGTGGCTGTaGCTGAAGTGTCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSWLRWL*LKCLWQ
Trigger: CTGCCACAGACACTTCAGCCACAGCCACCTCAGCCA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGTTCCAGGGGCTGGGTaGCCTCCAACACATCACAAT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVVPGAG*PPTHHN
Trigger: ATTGTGATGTGTTGGAGGCCACCCAGCCCCTGGAAC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCTCCTCCTCCTGCTGTaGCTGATGCTGTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVLLLLL*LMLSRT
Trigger: AGTTCTGGACAGCATCAGCCACAGCAGGAGGAGGAG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTCCCATGAGGCATTaGAGGGGACAGCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALVPMRH*RGQPCP
Trigger: GGGACAAGGCTGTCCCCTCCAATGCCTCATGGGAAC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAATGCTCTTTAGGGCCTaGATATTGCGGCGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALMLFRA*ILRRRS
Trigger: GCTCCGGCGCCGCAATATCCAGGCCCTAAAGAGCAT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTCCATGAGGTACTGCTaGGCCTGGGACCACGTGGTT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSSMRYC*AWDHVV
Trigger: AACCACGTGGTCCCAGGCCCAGCAGTACCTCATGGA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGCTGGCCCAGCATGTTaGCAAAGCGGACATCAGTGC +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSAGPAC*QSGHQC
Trigger: GCACTGATGTCCGCTTTGCCAACATGCTGGGCCAGC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGCTGGCCCAGCATGTTaGCAAAGCGGACATCAGTGC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALAGPAC*QSGHQC
Trigger: GCACTGATGTCCGCTTTGCCAACATGCTGGGCCAGC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGGGGTGGAGCCCGGCTaGCCCAGCATGTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGGVEPG*PSMLAK
Trigger: CTTTGCCAACATGCTGGGCCAGCCGGGCTCCACCCC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATCAAAGCTTATGACGTaGGCGAAGTCCTCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGSKLMT*AKSSKA
Trigger: GGCCTTTGAGGACTTCGCCCACGTCATAAGCTTTGA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CTGAATCAAGTGAGGAAGAGGGCTCAGAGCCTGACTCTGAGGGGTTCCGCCTCCTTTCGGCCTTTGGTGTaGAGGTGCTGGCATTCAGTC +
Preference number: 4 (lower is better)
Translates to: LNQVRKRAQSLTLRGSASFRPLV*RCWHSV
Trigger: GACTGAATGCCAGCACCTCCACACCAAAGGCCGAAA...GGAGGCGGAACCCCTCAGAGTCAGGCTCTGAGCCCTCTTCCTCACTTGATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACCAACAATGGTGTGCTaGGGGTGGGGTTACTTTAGA +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGPTMVC*GWGYFR
Trigger: TCTAAAGTAACCCCACCCCCAGCACACCATTGTTGG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAATCACCCACCCCACATaGCATATACCACCCATCTCT +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGITHPT*HIPPIS
Trigger: AGAGATGGGTGGTATATGCCATGTGGGGTGGGTGAT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAACGTACATTAGGTCCTaGGTGGAGGAAGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGTYIRS*VEEEVV
Trigger: CACCACTTCTTCCTCCACCCAGGACCTAATGTACGT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGCTCTGCCTTGGACTTaGGCACGCTGGGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGALPWT*ARWASP
Trigger: GGGAGAAGCCCAGCGTGCTCAAGTCCAAGGCAGAGC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACTGCAGCCTCTTGTTTaGCTAGAACCTCTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGLQPLV*LEPLGH
Trigger: ATGACCTAGAGGTTCTAGTCAAACAAGAGGCTGCAG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAACGTGGTTTGGAAGTTaGCACTACTCATCCCATCCA +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGTWFGS*HYSSHP
Trigger: TGGATGGGATGAGTAGTGTCAACTTCCAAACCACGT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCAGCGGACATCAGTGCTaGCTGCTGGATATAGCTCCA +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVSGHQC*LLDIAP
Trigger: TGGAGCTATATCCAGCAGTCAGCACTGATGTCCGCT...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp GCTCTCCTTGCCAGCTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGAGCTCCGACTCCAGGGTaGTCTGCTCAAAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ALLASFLLRVCLTLRTIRAPTPG*SAQRLS
Trigger: ACTCAGCCTTTGAGCAGATCACCCTGGAGTCGGAGC...TCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAGCTGGCAAGGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCACTCAGCTCACTTTCTaGCGTGTCCCAGCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVTQLTF*RVPACL
Trigger: AAGACAGGCTGGGACACGTCAGAAAGTGAGCTGAGT...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTCATTGGGTCACTGGTaGTCATCCAGCTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVSLGHW*SSSCCR
Trigger: CCTACAGCAGCTGGATGATCACCAGTGACCCAATGA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCACCAAGAGCAACCTTaGGAGGTGCCAACAATGGTG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVHQEQP*EVPTMV
Trigger: CACCATTGTTGGCACCTCTCAAGGTTGCTCTTGGTG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGGAGTAGGGGACCCTTaGACACCAAGAGCAACCTTG +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALGVGDP*TPRATL
Trigger: CAAGGTTGCTCTTGGTGTTCAAGGGTCCCCTACTCC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTCCCTGGAGGGGGCATaGAGGGTGGTGGCATCATGG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGSLEGA*RVVASW
Trigger: CCATGATGCCACCACCCTTCATGCCCCCTCCAGGGA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCTTGAATGCCTGCTTTaGCTTCTCCCGGTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVLECLL*LLPVAP
Trigger: TGGAGCAACCGGGAGAAGGCAAAGCAGGCATTCAAG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCAAATGCTGCAGGGTCTaGTTGGCCTCTTTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVKCCRV*LASLAL
Trigger: AAGGGCCAAAGAGGCCAAGCAGACCCTGCAGCATTT...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTTGCGGCGCCGGAGCTaGTTGGCCTGTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGLRRRS*LACSFS
Trigger: GGAGAAGGAACAGGCCAAGCAGCTCCGGCGCCGCAA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATCATCCCATCCAGGATaGTCTTTAGGGCCTGGATAT +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGSSHPG*SLGPGY
Trigger: ATATCCAGGCCCTAAAGAGCATCCTGGATGGGATGA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTTATCCATGAGGTACTaGTGGGCCTGGGACCACGTG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSLSMRY*WAWDHV
Trigger: CACGTGGTCCCAGGCCCAGCAGTACCTCATGGATAA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGACATAGAGTGCAGCTaGCCTGTCTCATGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSDIECS*PVSCSS
Trigger: CGAGCTGCATGAGACAGGGCAGCTGCACTCTATGTC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTAGAGCAGGCACAGCCTaGCTCAGCATGCTTCGAAAG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSRAGTA*LSMLRK
Trigger: CTTTCGAAGCATGCTGAGGCAGGCTGTGCCTGCTCT...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGACTCCAGGGTGATCTaGTCAAAGGCTGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVDSRVI*SKAESH
Trigger: GTGTGACTCAGCCTTTGAGCAGATCACCCTGGAGTC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp GAGCCCCGTCCTCCAAGGGCAGCACCCCCACTTTCAACTGAATCAAGTGAGGAAGACTCCAGGGTGATCTaGTCAAAGGCTGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: EPRPPRAAPPLSTESSEEDSRVI*SKAESH
Trigger: GTGTGACTCAGCCTTTGAGCAGATCACCCTGGAGTC...TTCCTCACTTGATTCAGTTGAAAGTGGGGGTGCTGCCCTTGGAGGACGGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATGTGATGGTGCTTCTTaGCTTTCCTGCCATGCTTTC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGCDGAS*LSCHAF
Trigger: GAAAGCATGGCAGGAAAGGCAAGAAGCACCATCACA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTCAGGGAGTCCCCAAGTaGTCTGAGGAGCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGQGVPK*SEEHPG
Trigger: GCCTGGGTGCTCCTCAGACCACTTGGGGACTCCCTG...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTGGTGGCGCCCCCATTaGTGGAAGCATTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGWWRPH*WKHWGQ
Trigger: CTGCCCCCAATGCTTCCACCAATGGGGGCGCCACCA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCGGAGGTACCATTCCTaGTATCTGTGTGAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVRRYHS*YLCEWW
Trigger: CCACCACTCACACAGATACCAGGAATGGTACCTCCG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTGGCTGAAGTGTCTGTaGCAGCTGCTGCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVWLKCL*QLLLLF
Trigger: AAACAGCAGCAGCAGCTGCCACAGACACTTCAGCCA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGTTCCAGGGGCTGGGTaGCCTCCAACACATCACAAT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSVPGAG*PPTHHN
Trigger: ATTGTGATGTGTTGGAGGCCACCCAGCCCCTGGAAC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTCCTCCTCCTGCTGTaGCTGATGCTGTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSLLLLL*LMLSRT
Trigger: AGTTCTGGACAGCATCAGCCACAGCAGGAGGAGGAG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTCCCGCCGGTAGCGGGTaGTGGAGGTCATGCGTTCAT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGPAGSG*WRSCVH
Trigger: ATGAACGCATGACCTCCACCACCCGCTACCGGCGGG...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATGGGACCACGTGGTTTaGAAGTTGACACTACTCATC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGWDHVV*KLTLLI
Trigger: GATGAGTAGTGTCAACTTCCAAACCACGTGGTCCCA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTCGTCCAGGAAGGTCTaGAAGGCCTCCCGATTCTTG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSSSRKV*KASRFL
Trigger: CAAGAATCGGGAGGCCTTCCAGACCTTCCTGGACGA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTATAAGTCCAGAGGGGTaGAGCCCGGCTGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGISPEG*SPAGPA
Trigger: TGCTGGGCCAGCCGGGCTCCACCCCTCTGGACTTAT...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTATTGGTGTGGAGGTGCTaGCATTCAGTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALLVWRC*HSVCSS
Trigger: GCTGGAGCAGACTGAATGCCAGCACCTCCACACCAA...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261897.5
ENST00000380281.5
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTTGGTGTGGAGGTGCTaGCATTCAGTCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSLVWRC*HSVCSS
Trigger: GCTGGAGCAGACTGAATGCCAGCACCTCCACACCAA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261897.5
ENST00000380281.5
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTTTCGGCCTTTGGTGTaGAGGTGCTGGCATTCAGTC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVFRPLV*RCWHSV
Trigger: GACTGAATGCCAGCACCTCCACACCAAAGGCCGAAA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACAGAGAACAGCTCATTaGGTCACTGGTGATCATCCA +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGQRTAH*VTGDHP
Trigger: TGGATGATCACCAGTGACCCAATGAGCTGTTCTCTG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTATATACCACCCATCTCTaGTCTGGGGCTGAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALYTTHL*SGAEGK
Trigger: CTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATA...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
3UTR CAA 72 bp GGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACCCTaGAACACCAAGAGCAACCTTGAGAGGTGCCAACAA +
Preference number: 4 (lower is better)
Translates to: GKDCTSPGSRGP*NTKSNLERCQQ
Trigger: TTGTTGGCACCTCTCAAGGTTGCTCTTGGTGTTCAAGGGTCCCCTACTCCCTGGACTAGTGCAGTCCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTTCCTGGTATCTGTGTaGGTGGTGGTGGCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGFLVSV*VVVAPP
Trigger: TGGGGGCGCCACCACCACTCACACAGATACCAGGAA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGCGCCTTGTAGGCATTaGATGCCTGCTTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVAPCRH*MPAFSH
Trigger: GTGAGAAAAAGCAGGCATTCAATGCCTACAAGGCGC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTAGCGGACATCAGTGCTaGCTGCTGGATATAGCTCCA +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSSGHQC*LLDIAP
Trigger: TGGAGCTATATCCAGCAGTCAGCACTGATGTCCGCT...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCCTCCACATAGAACTTaGATAAGTCCAGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVPPHRT*ISPEGW
Trigger: CCACCCCTCTGGACTTATTCAAGTTCTATGTGGAGG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGATCTGCTCAAAGGCTaGGTCACACACAAAACGCTC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVDLLKG*VTHKTL
Trigger: GAGCGTTTTGTGTGTGACTCAGCCTTTGAGCAGATC...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAACTCAGCTCACTTTCTaGCGTGTCCCAGCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALTQLTF*RVPACL
Trigger: AAGACAGGCTGGGACACGTCAGAAAGTGAGCTGAGT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp GCTCTCCTTGCCAGCTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGACAGCTCCTCTTCTTCTaGCTCAGAGCCCTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: ALLASFLLRVCLTLRTIRQLLFF*LRALSC
Trigger: GCAGGAAAGGGCTCTGAGTCAGAAGAAGAGGAGCTG...TCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAGCTGGCAAGGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCATTGTAGTAGTAGATaGGCCCATCTGGGGCCACAT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVHCSSR*AHLGPH
Trigger: ATGTGGCCCCAGATGGGCGCATCTACTACTACAATG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTAAATGCTGCAGGGTCTaGTTGGCCTCTTTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSKCCRV*LASLAL
Trigger: AAGGGCCAAAGAGGCCAAGCAGACCCTGCAGCATTT...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCATGCGTTCATGCTaGTCCAGGAAATGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALVMRSC*SRKCCR
Trigger: CCTGCAGCATTTCCTGGAGCAGCATGAACGCATGAC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGTCATGCGTTCATGCTaGTCCAGGAAATGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSVMRSC*SRKCCR
Trigger: CCTGCAGCATTTCCTGGAGCAGCATGAACGCATGAC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGAGGTCATGCGTTCATaGTGCTCCAGGAAATGCTGC +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSEVMRS*CSRKCC
Trigger: GCAGCATTTCCTGGAGCAGCATGAACGCATGACCTC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp GCTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGACTTGTGTCTTCTCCAGCTTGATGTTGCCTaGGTCCAGTGCGGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: AFSSGSVSLSGLFDLCLLQLDVA*VQCGSP
Trigger: AGGGCTGCCGCACTGGACGCAGGCAACATCAAGCTG...GAGAAGACACAAGTCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTCCTCTTCCCAGGCAGTaGCTAGCTCCAGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGPLPRQ*LAPEQA
Trigger: TGCCTGCTCTGGAGCTAGGCACTGCCTGGGAAGAGG...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGACTCCAGGGTGATCTaGTCAAAGGCTGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALDSRVI*SKAESH
Trigger: GTGTGACTCAGCCTTTGAGCAGATCACCCTGGAGTC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGACTCCAGGGTGATCTaGTCAAAGGCTGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSDSRVI*SKAESH
Trigger: GTGTGACTCAGCCTTTGAGCAGATCACCCTGGAGTC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGCTTCTTGCCTTTCCTaGCATGCTTTCGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALASCLS*HAFGLW
Trigger: CCAAAGGCCGAAAGCATGGCAGGAAAGGCAAGAAGC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGCTTCTTGCCTTTCCTaGCATGCTTTCGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSASCLS*HAFGLW
Trigger: CCAAAGGCCGAAAGCATGGCAGGAAAGGCAAGAAGC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACCGAAGGCCATGATCTaGTCCAAGAAGATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALPKAMI*SKKMGG
Trigger: TCCTCCCATCTTCTTGGAGCAGATCATGGCCTTCGG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTATCTCATCGCTCTCCTTaGCAGCTTTCTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALSHRSP*QLSPQG
Trigger: ACCCTGAGGAGAAAGCTGGCAAGGAGAGCGATGAGA...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTCTCATCGCTCTCCTTaGCAGCTTTCTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSSHRSP*QLSPQG
Trigger: ACCCTGAGGAGAAAGCTGGCAAGGAGAGCGATGAGA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAAGCAACCTTGAGAGGTaGCAACAATGGTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALSNLER*QQWCAG
Trigger: CCCAGCACACCATTGTTGGCACCTCTCAAGGTTGCT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTAGCAACCTTGAGAGGTaGCAACAATGGTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSSNLER*QQWCAG
Trigger: CCCAGCACACCATTGTTGGCACCTCTCAAGGTTGCT...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGTGGTCTCTGACTCATaGGGGGTAGCCCCATCGGAG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGVVSDS*GVAPSE
Trigger: CTCCGATGGGGCTACCCCCCATGAGTCAGAGACCAC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTGGCGCCCCCATTGGTaGAAGCATTGGGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGWRPHW*KHWGQD
Trigger: ATCCTGCCCCCAATGCTTCCACCAATGGGGGCGCCA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGGAGGTACCATTCCTaGTATCTGTGTGAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSRRYHS*YLCEWW
Trigger: CCACCACTCACACAGATACCAGGAATGGTACCTCCG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTGGCTGAAGTGTCTGTaGCAGCTGCTGCTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSWLKCL*QLLLLF
Trigger: AAACAGCAGCAGCAGCTGCCACAGACACTTCAGCCA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGCCGGTAGCGGGTGGTaGAGGTCATGCGTTCATGCT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGAGSGW*RSCVHA
Trigger: AGCATGAACGCATGACCTCCACCACCCGCTACCGGC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGGCGCCGGAGCTGCTTaGCCTGTTCCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGGAGAA*PVPSPS
Trigger: AGAAGGAGAAGGAACAGGCCAAGCAGCTCCGGCGCC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTTTCGGCCTTTGGTGTaGAGGTGCTGGCATTCAGTC +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSFRPLV*RCWHSV
Trigger: GACTGAATGCCAGCACCTCCACACCAAAGGCCGAAA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCATGCTTTCGGCCTTTaGTGTGGAGGTGCTGGCATT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSHAFGL*CGGAGI
Trigger: AATGCCAGCACCTCCACACCAAAGGCCGAAAGCATG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTTGATTCCAAAGCCTaGGGAACGGTTAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSLDSKA*GTVREL
Trigger: GAGCTCCCTAACCGTTCCCCAGGCTTTGGAATCAAG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACTTGATTCCAAAGCCTaGGGAACGGTTAGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALLDSKA*GTVREL
Trigger: GAGCTCCCTAACCGTTCCCCAGGCTTTGGAATCAAG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAATGGTGTGCTGGGGGTaGGGTTACTTTAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGMVCWG*GYFRKS
Trigger: ACTTTTTCTAAAGTAACCCCACCCCCAGCACACCAT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTGGAGGAAGAAGTGGTaGAGCCTCAGGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGWRKKW*SLRARA
Trigger: TGCCCTGGCCCTGAGGCTCCACCACTTCTTCCTCCA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAACATTAGGTCCTGGGTaGAGGAAGAAGTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALTLGPG*RKKWWS
Trigger: GCTCCACCACTTCTTCCTCCACCCAGGACCTAATGT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTCCTCCTGCTGTGGCTaGTGCTGTCCAGAACTGCTG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGSSCCG*CCPELL
Trigger: CAGCAGTTCTGGACAGCATCAGCCACAGCAGGAGGA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTGTAACGGGGGTCGGTaGCCACCATCTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGCNGGR*PPSSWP
Trigger: AGGCCATGAAGATGGTGGTCACCGACCCCCGTTACA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCACGTGGTTTGGAAGTTaGCACTACTCATCCCATCCA +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVTWFGS*HYSSHP
Trigger: TGGATGGGATGAGTAGTGTCAACTTCCAAACCACGT...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCTCCACATAGAACTTaGATAAGTCCAGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSPPHRT*ISPEGW
Trigger: CCACCCCTCTGGACTTATTCAAGTTCTATGTGGAGG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTCTTGTCAAAGCTTATaGCGTGGGCGAAGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVSCQSL*RGRSPQ
Trigger: TTGAGGACTTCGCCCACGTCATAAGCTTTGACAAGA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp TCAACTGAATCAAGTGAGGAAGAGGGCTCAGAGCCTGACTCTGAGGGGTTCCGCGATCTGCTCAAAGGCTaGGTCACACACAAAACGCTC +
Preference number: 4 (lower is better)
Translates to: STESSEEEGSEPDSEGFRDLLKG*VTHKTL
Trigger: GAGCGTTTTGTGTGTGACTCAGCCTTTGAGCAGATC...GCGGAACCCCTCAGAGTCAGGCTCTGAGCCCTCTTCCTCACTTGATTCAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTGTGGCAGCTGCTGCTaGTGTTTCCCTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGCGSCC*CFPAAS
Trigger: AGAGGCTGCAGGGAAACAGCAGCAGCAGCTGCCACA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGGGTGGTGGAGGTCATaGGTTCATGCTGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGGWWRS*VHAAPG
Trigger: TCCTGGAGCAGCATGAACGCATGACCTCCACCACCC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATTCATCATGGAATCGTaGCTTCAACTCCTCCACATA +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGFIMES*LQLLHI
Trigger: TATGTGGAGGAGTTGAAGGCACGATTCCATGATGAA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGTTGCCTGCGTCCAGTaGGGCAGCCCTCTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGVACVQ*GSPLVK
Trigger: TTTGACAAGAGGGCTGCCGCACTGGACGCAGGCAAC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTACGGTTAGGGAGCTCTaGCTGTTGGAGCTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGTVREL*LLELPV
Trigger: GACAGGGAGCTCCAACAGGCAGAGCTCCCTAACCGT...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp GCCAGCTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGACTTGTGTCTCTCAGAGCCCTTTCCTaGCATGCTTTCGGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ASFLLRVCLTLRTIRLVSLRALS*HAFGLW
Trigger: CCAAAGGCCGAAAGCATGGCAGGAAAGGGCTCTGAG...AGACACAAGTCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTATCTGTGTGAGTGGTaGTGGCGCCCCCATTGGTGG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGYLCEW*WRPHWW
Trigger: CCACCAATGGGGGCGCCACCACCACTCACACAGATA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTGGTATCTGTGTGAGTaGTGGTGGCGCCCCCATTGG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGWYLCE*WWRPHW
Trigger: CCAATGGGGGCGCCACCACCACTCACACAGATACCA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTGGCATCAGCATTCCTaGCATCATCGGAGGTACCAT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSWHQHS*HHRRYH
Trigger: ATGGTACCTCCGATGATGCCAGGAATGCTGATGCCA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTATGGCATCAGCATTCCTaGCATCATCGGAGGTACCAT +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALWHQHS*HHRRYH
Trigger: ATGGTACCTCCGATGATGCCAGGAATGCTGATGCCA...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTGGCTGAGGTGGCTGTaGCTGAAGTGTCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGWLRWL*LKCLWQ
Trigger: CTGCCACAGACACTTCAGCCACAGCCACCTCAGCCA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTAGGCTGTGGCTGAGGTaGCTGTGGCTGAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGRLWLR*LWLKCL
Trigger: CAGACACTTCAGCCACAGCCACCTCAGCCACAGCCT...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTGGGACCACGTGGTTTaGAAGTTGACACTACTCATC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVWDHVV*KLTLLI
Trigger: GATGAGTAGTGTCAACTTCCAAACCACGTGGTCCCA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTCCATGAGGTACTGCTaGGCCTGGGACCACGTGGTT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGSMRYC*AWDHVV
Trigger: AACCACGTGGTCCCAGGCCCAGCAGTACCTCATGGA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTCAAAGCTTATGACGTaGGCGAAGTCCTCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSSKLMT*AKSSKA
Trigger: GGCCTTTGAGGACTTCGCCCACGTCATAAGCTTTGA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CCCCACTTTCAACTGAATCAAGTGAGGAAGAGGGCTCAGAGCCTGACTCTGAGGCATGCTTTCGGCCTTTaGTGTGGAGGTGCTGGCATT +
Preference number: 4 (lower is better)
Translates to: PHFQLNQVRKRAQSLTLRHAFGL*CGGAGI
Trigger: AATGCCAGCACCTCCACACCAAAGGCCGAAAGCATG...CCTCAGAGTCAGGCTCTGAGCCCTCTTCCTCACTTGATTCAGTTGAAAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACCAACAATGGTGTGCTaGGGGTGGGGTTACTTTAGA +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALPTMVC*GWGYFR
Trigger: TCTAAAGTAACCCCACCCCCAGCACACCATTGTTGG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTATCACCCACCCCACATaGCATATACCACCCATCTCT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSITHPT*HIPPIS
Trigger: AGAGATGGGTGGTATATGCCATGTGGGGTGGGTGAT...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAACGTACATTAGGTCCTaGGTGGAGGAAGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALTYIRS*VEEEVV
Trigger: CACCACTTCTTCCTCCACCCAGGACCTAATGTACGT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTACGTACATTAGGTCCTaGGTGGAGGAAGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSTYIRS*VEEEVV
Trigger: CACCACTTCTTCCTCCACCCAGGACCTAATGTACGT...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGCAAATGCAGGAAGGTaGAGCAGGGAGTCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGANAGR*SRESPS
Trigger: ACTTGGGGACTCCCTGCTTCACCTTCCTGCATTTGC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS-3UTR TCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACTGCAGCCTCTTGTTTaGCTAGAACCTCTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALLQPLV*LEPLGH
Trigger: ATGACCTAGAGGTTCTAGTCAAACAAGAGGCTGCAG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTATCTTGTCAAAGCTTATaGCGTGGGCGAAGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALSCQSL*RGRSPQ
Trigger: TTGAGGACTTCGCCCACGTCATAAGCTTTGACAAGA...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTCTTGTCAAAGCTTATaGCGTGGGCGAAGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSSCQSL*RGRSPQ
Trigger: TTGAGGACTTCGCCCACGTCATAAGCTTTGACAAGA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTATCATCCCATCCAGGATaGTCTTTAGGGCCTGGATAT +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALSSHPG*SLGPGY
Trigger: ATATCCAGGCCCTAAAGAGCATCCTGGATGGGATGA...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGACATAGAGTGCAGCTaGCCTGTCTCATGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGDIECS*PVSCSS
Trigger: CGAGCTGCATGAGACAGGGCAGCTGCACTCTATGTC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTCAGGTGGACATAGAGTaGAGCTGCCCTGTCTCATGC +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGQVDIE*SCPVSC
Trigger: GCATGAGACAGGGCAGCTGCACTCTATGTCCACCTG...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTAGAGCAGGCACAGCCTaGCTCAGCATGCTTCGAAAG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGRAGTA*LSMLRK
Trigger: CTTTCGAAGCATGCTGAGGCAGGCTGTGCCTGCTCT...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CAGCTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGACTTGTGTCTTCAGAGCAGGCACAGCCTaGCTCAGCATGCTTCGAAAG +
Preference number: 4 (lower is better)
Translates to: QLSPQGLSHSQDYSTCVFRAGTA*LSMLRK
Trigger: CTTTCGAAGCATGCTGAGGCAGGCTGTGCCTGCTCT...GAAGACACAAGTCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR GCA 90 bp CCAGCTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGACTTGTGTCTTCCTTTGGTGTGGAGGTaGTGGCATTCAGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PAFSSGSVSLSGLFDLCLPLVWR*WHSVSS
Trigger: GCTGGAGACTGAATGCCAGCACCTCCACACCAAAGG...AAGACACAAGTCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTCTTTCCAGGGACATTaGGACAGGAGCAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGSFQGH*DRSSSA
Trigger: GGCAGAGCTGCTCCTGTCCCAATGTCCCTGGAAAGA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAATCTTCTTTTCATCATaGAATCGTGCCTTCAACTCC +
Preference number: 4 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGIFFSS*NRAFNS
Trigger: GGAGTTGAAGGCACGATTCCATGATGAAAAGAAGAT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACAGAGAACAGCTCATTaGGTCACTGGTGATCATCCA +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALQRTAH*VTGDHP
Trigger: TGGATGATCACCAGTGACCCAATGAGCTGTTCTCTG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCAGAGAACAGCTCATTaGGTCACTGGTGATCATCCA +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSQRTAH*VTGDHP
Trigger: TGGATGATCACCAGTGACCCAATGAGCTGTTCTCTG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTATACCACCCATCTCTaGTCTGGGGCTGAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGYTTHL*SGAEGK
Trigger: CTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACACACTTTTATCTACTaGCATCACCCACCCCACATG +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALHTFIY*HHPPHM
Trigger: CATGTGGGGTGGGTGATGCCAGTAGATAAAAGTGTG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTTGGTGTGGAGGTGCTaGCATTCAGTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGLVWRC*HSVSST
Trigger: GGTGCTGGAGACTGAATGCCAGCACCTCCACACCAA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548825.7
CDS-3UTR TCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTCACCAAGAGCAACCTTaGGAGGTGCCAACAATGGTG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGHQEQP*EVPTMV
Trigger: CACCATTGTTGGCACCTCTCAAGGTTGCTCTTGGTG...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCTTGTAGGCATTGAATaGCTGCTTTTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVLVGIE*LLFLTQ
Trigger: CTGAGTGAGAAAAAGCAGGCATTCAATGCCTACAAG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTAAATGCTGCAGGGTCTaGTTGGCCTCTTTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGKCCRV*LASLAL
Trigger: AAGGGCCAAAGAGGCCAAGCAGACCCTGCAGCATTT...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGTCATGCGTTCATGCTaGTCCAGGAAATGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGVMRSC*SRKCCR
Trigger: CCTGCAGCATTTCCTGGAGCAGCATGAACGCATGAC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGAGGTCATGCGTTCATaGTGCTCCAGGAAATGCTGC +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGEVMRS*CSRKCC
Trigger: GCAGCATTTCCTGGAGCAGCATGAACGCATGACCTC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTATCCAAAGCTCGGATGTaGTCCTCAAAACAGATCAGT +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALSKARM*SSKQIS
Trigger: ACTGATCTGTTTTGAGGAGCACATCCGAGCTTTGGA...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTCCAAAGCTCGGATGTaGTCCTCAAAACAGATCAGT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSSKARM*SSKQIS
Trigger: ACTGATCTGTTTTGAGGAGCACATCCGAGCTTTGGA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTTCATCATGGAATCGTaGCTTCAACTCCTCCACATA +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVFIMES*LQLLHI
Trigger: TATGTGGAGGAGTTGAAGGCACGATTCCATGATGAA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTCCTCTCCCGTGCCTCTaGTTTCTCCAGCAGACTATT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGPLPCL*FLQQTI
Trigger: AATAGTCTGCTGGAGAAAGCAGAGGCACGGGAGAGG...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp CCAGCTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGACTTGTGTCTTCCTCTCCCGTGCCTCTaGTTTCTCCAGCAGACTATT +
Preference number: 4 (lower is better)
Translates to: PAFSSGSVSLSGLFDLCLPLPCL*FLQQTI
Trigger: AATAGTCTGCTGGAGAAAGCAGAGGCACGGGAGAGG...AAGACACAAGTCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR GCA 90 bp CAGCTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGACTTGTGTCTTCCCGAAGGCCATGATCTaGTCCAAGAAGATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QLSPQGLSHSQDYSTCVFPKAMI*SKKMGG
Trigger: TCCTCCCATCTTCTTGGAGCAGATCATGGCCTTCGG...GAAGACACAAGTCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTCTCATCGCTCTCCTTaGCAGCTTTCTCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGSHRSP*QLSPQG
Trigger: ACCCTGAGGAGAAAGCTGGCAAGGAGAGCGATGAGA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTAGCAACCTTGAGAGGTaGCAACAATGGTGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGSNLER*QQWCAG
Trigger: CCCAGCACACCATTGTTGGCACCTCTCAAGGTTGCT...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGCGCCTTGTAGGCATTaGATGCCTGCTTTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGAPCRH*MPAFSH
Trigger: GTGAGAAAAAGCAGGCATTCAATGCCTACAAGGCGC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGATCTGCTCAAAGGCTaGGTCACACACAAAACGCTC +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGDLLKG*VTHKTL
Trigger: GAGCGTTTTGTGTGTGACTCAGCCTTTGAGCAGATC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTCATTGTAGTAGTAGATaGGCCCATCTGGGGCCACAT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGHCSSR*AHLGPH
Trigger: ATGTGGCCCCAGATGGGCGCATCTACTACTACAATG...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTTGTAGGCATTGAATaGCTGCTTTTTCTCACTCAG +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSLVGIE*LLFLTQ
Trigger: CTGAGTGAGAAAAAGCAGGCATTCAATGCCTACAAG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTGGCATCAGCATTCCTaGCATCATCGGAGGTACCAT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGWHQHS*HHRRYH
Trigger: ATGGTACCTCCGATGATGCCAGGAATGCTGATGCCA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCATCTTCTTTTCATCATaGAATCGTGCCTTCAACTCC +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVIFFSS*NRAFNS
Trigger: GGAGTTGAAGGCACGATTCCATGATGAAAAGAAGAT...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CTCAGGGTCTGTCTCACTCTCAGGACTATTCGACTTGTGTCTTCTCTTCTTAGTTTGGTGTGGAGGTGCTaGCATTCAGTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: LRVCLTLRTIRLVSSLLSLVWRC*HSVSST
Trigger: GGTGCTGGAGACTGAATGCCAGCACCTCCACACCAA...ACTAAGAAGAGAAGACACAAGTCGAATAGTCCTGAGAGTGAGACAGACCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTACAAGCTCTTGCAAATaGAGGAAGGTGAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGTSSCK*RKVKQG
Trigger: TCCCTGCTTCACCTTCCTGCATTTGCAAGAGCTTGT...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS-3UTR GCA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTATAGTAATAAGGTTTaGCTGTGTCCGACTTGTACT +
Preference number: 4 (lower is better)
Translates to: WHIPPISGLGLRARTALVYSNKV*LCPTCT
Trigger: AGTACAAGTCGGACACAGGCAAACCTTATTACTATA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTCATCCCATCCAGGATaGTCTTTAGGGCCTGGATAT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGSSHPG*SLGPGY
Trigger: ATATCCAGGCCCTAAAGAGCATCCTGGATGGGATGA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR GCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTGTGATGGTGCTTCTTaGCTTTCCTGCCATGCTTTC +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGCDGAS*LSCHAF
Trigger: GAAAGCATGGCAGGAAAGGCAAGAAGCACCATCACA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAATCTTCTTTTCATCATaGAATCGTGCCTTCAACTCC +
Preference number: 4 (lower is better)
Translates to: TWHIPPISGLGLRARTALIFFSS*NRAFNS
Trigger: GGAGTTGAAGGCACGATTCCATGATGAAAAGAAGAT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp CTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGACTTGTGTCTTCTCTTCAAAGCTTATGACGTaGGCGAAGTCCTCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LSPQGLSHSQDYSTCVFSSKLMT*AKSSKA
Trigger: GGCCTTTGAGGACTTCGCCCACGTCATAAGCTTTGA...AGAGAAGACACAAGTCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTCACACTTTTATCTACTaGCATCACCCACCCCACATG +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGHTFIY*HHPPHM
Trigger: CATGTGGGGTGGGTGATGCCAGTAGATAAAAGTGTG...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR TCA 90 bp CTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGACTTGTGTCTTCTCTTCTTGTCAAAGCTTATaGCGTGGGCGAAGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LSPQGLSHSQDYSTCVFSSCQSL*RGRSPQ
Trigger: TTGAGGACTTCGCCCACGTCATAAGCTTTGACAAGA...AGAGAAGACACAAGTCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR GCA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTATAGTAATAAGGTTTaGCTGTGTCCGACTTGTACT +
Preference number: 4 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSYSNKV*LCPTCT
Trigger: AGTACAAGTCGGACACAGGCAAACCTTATTACTATA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CCA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTATGGTGTGCTGGGGGTaGGGTTACTTTAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGMVCWG*GYFRKS
Trigger: ACTTTTTCTAAAGTAACCCCACCCCCAGCACACCAT...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS CCA 90 bp CGGGGACCAGAATCGGGAACCGACATGCCAGAGCCTCCGAGCAGCTaGGCCGGCTCAGCCCACCCGCCAGTAAGAGCCGCTCTGATTGGC +
Preference number: 5 (lower is better)
Translates to: RGPESGTDMPEPPSS*AGSAHPPVRAALIG
Trigger: GCCAATCAGAGCGGCTCTTACTGGCGGGTGGGCTGAGCCGGCCCAGCTGCTCGGAGGCTCTGGCATGTCGGTTCCCGATTCTGGTCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551418.5
CDS GCA 90 bp CTGCAGGGCAGAGCCTGCTACCTGCTGGCCCCTAGTGCTTACCGCTaGGGTGACAGGCACCGCTGGCATCAGCATTCCTGGCATCATCGG +
Preference number: 5 (lower is better)
Translates to: LQGRACYLLAPSAYR*GDRHRWHQHSWHHR
Trigger: CCGATGATGCCAGGAATGCTGATGCCAGCGGTGCCTGTCACCGCAGCGGTAAGCACTAGGGGCCAGCAGGTAGCAGGCTCTGCCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548436.5
ENST00000551418.5
CDS GCA 90 bp CATTCCAAGTCAGACTCACGGGACTGCAGGGCAGAGCCTGCTACCTaGTGGCCCCTAGTGCTTACCGCTGCGGTGACAGGCACCGCTGGC +
Preference number: 5 (lower is better)
Translates to: HSKSDSRDCRAEPAT*WPLVLTAAVTGTAG
Trigger: GCCAGCGGTGCCTGTCACCGCAGCGGTAAGCACTAGGGGCCAGCAGGTAGCAGGCTCTGCCCTGCAGTCCCGTGAGTCTGACTTGGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548436.5
ENST00000551418.5
CDS GCA 90 bp CCCCAAGCCGGACCCAATCTGCTCACCAAAGCAGGAGGCCACACTTaGCCATGTCTCCTAGTACCCAGCAGCCTGCCCTCCCGGCGACCA +
Preference number: 5 (lower is better)
Translates to: PQAGPNLLTKAGGHT*PCLLVPSSLPSRRP
Trigger: TGGTCGCCGGGAGGGCAGGCTGCTGGGTACTAGGAGACATGGGCAAGTGTGGCCTCCTGCTTTGGTGAGCAGATTGGGTCCGGCTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547764.1
CDS CCA 90 bp CTAGAGAGCTCCAGGCAGGTGACCTCTGAGAGCCAAGAGGAGCCCTaGGAGGAGGAATTCGGCCGGGAGATGCGGAGGCAGCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LESSRQVTSESQEEP*EEEFGREMRRQLWL
Trigger: CAGCCACAGCTGCCTCCGCATCTCCCGGCCGAATTCCTCCTCCCAGGGCTCCTCTTGGCTCTCAGAGGTCACCTGCCTGGAGCTCTCTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS CCA 90 bp TATGACATTCTCCGCTGGCTGGGTGACTGGGGTGAGTTTGCAGGCTaGGCACCGTGCCTCCTCTGGGAGGGGAGTGTGGGTGGCGAGCAC +
Preference number: 5 (lower is better)
Translates to: YDILRWLGDWGEFAG*APCLLWEGSVGGEH
Trigger: GTGCTCGCCACCCACACTCCCCTCCCAGAGGAGGCACGGTGCCCAGCCTGCAAACTCACCCCAGTCACCCAGCCAGCGGAGAATGTCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508736.1
ENST00000527253.2
CDS CCA 90 bp TCCAAGTCAGACTCACGGGACTGCAGGGCAGAGCCTGCTACCTGCTaGCCCCTAGTGCTTACCGCTGCGGTGACAGGCACCGCTGGCATC +
Preference number: 5 (lower is better)
Translates to: SKSDSRDCRAEPATC*PLVLTAAVTGTAGI
Trigger: GATGCCAGCGGTGCCTGTCACCGCAGCGGTAAGCACTAGGGGCCAGCAGGTAGCAGGCTCTGCCCTGCAGTCCCGTGAGTCTGACTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548436.5
ENST00000551418.5
CDS CCA 90 bp CCAAGTGGTCTGAGGAGCACCCAGGCTTCCAAAGGGAACGGGCGCTaGGGCTGGGGGAAGGGCATGTCGCACACCAAATATCCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PSGLRSTQASKGNGR*GWGKGMSHTKYPRR
Trigger: CCTCCTGGGATATTTGGTGTGCGACATGCCCTTCCCCCAGCCCCAGCGCCCGTTCCCTTTGGAAGCCTGGGTGCTCCTCAGACCACTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS CCA 90 bp TTGAACGAGGAGAGCACTGCTGATCAGACTAGGCCCCACTCAGCCTaGCCTGGACACCGCCATGAGCACAGGGCAGGGCTGGGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: LNEESTADQTRPHSA*PGHRHEHRAGLGQR
Trigger: TCTCTGCCCCAGCCCTGCCCTGTGCTCATGGCGGTGTCCAGGCCAGGCTGAGTGGGGCCTAGTCTGATCAGCAGTGCTCTCCTCGTTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546626.1
CDS-3UTR CAA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAAGGTCATCCAGATCCTaGGGCCGGGTCCAGCGGGAC +
Preference number: 5 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGRSSRS*GRVQRD
Trigger: GTCCCGCTGGACCCGGCCCAAGGATCTGGATGACCT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACGGCGCCGGAGCTGCTaGGCCTGTTCCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGRRRSC*ACSFSF
Trigger: GAAGGAGAAGGAACAGGCCAAGCAGCTCCGGCGCCG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 90 bp GCCTCACACAGACCCGAGGCAGAGAACAGCTCATTGGGTCACTGGTaGTCATCCAGCTGCTGTAGGAGTGTCCGCCGCCGCCTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ASHRPEAENSSLGHW*SSSCCRSVRRRLSS
Trigger: GCTGGAGAGGCGGCGGCGGACACTCCTACAGCAGCTGGATGATCACCAGTGACCCAATGAGCTGTTCTCTGCCTCGGGTCTGTGTGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS GCA 90 bp AGTCCTGCATTCCAAGTCAGACTCACGGGACTGCAGGGCAGAGCCTaGTACCTGCTGGCCCCTAGTGCTTACCGCTGCGGTGACAGGCAC +
Preference number: 5 (lower is better)
Translates to: SPAFQVRLTGLQGRA*YLLAPSAYRCGDRH
Trigger: GTGCCTGTCACCGCAGCGGTAAGCACTAGGGGCCAGCAGGTAGCAGGCTCTGCCCTGCAGTCCCGTGAGTCTGACTTGGAATGCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548436.5
ENST00000551418.5
CDS TCA 90 bp CCTGGTCCCATCAATATCCCAGACTCCTTGGCATCCCAACAGGCATaGTCCAGGGTGGGCTCCAGTCCACGGTCCCCTCTCCCCTATGCC +
Preference number: 5 (lower is better)
Translates to: PGPINIPDSLASQQA*SRVGSSPRSPLPYA
Trigger: GGCATAGGGGAGAGGGGACCGTGGACTGGAGCCCACCCTGGATCATGCCTGTTGGGATGCCAAGGAGTCTGGGATATTGATGGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS GCA 90 bp GTGGAGGTCATGCGTTCATGCTGCTCCAGGAAATGCTGCAGGGTCTaGTTGGCCTCTTTGGCCCTTAGCCGGGCCTCCTCCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VEVMRSCCSRKCCRV*LASLALSRASSFSS
Trigger: GGAGGAGAAGGAGGAGGCCCGGCTAAGGGCCAAAGAGGCCAAGCAGACCCTGCAGCATTTCCTGGAGCAGCATGAACGCATGACCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS CCA 90 bp CGGAGCCGTCGCTGCGGTGACAGGCACCGCTGGCATCAGCATTCCTaGCATCATCGGAGGTACCATTCCTGGTATCTGTGTGAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: RSRRCGDRHRWHQHS*HHRRYHSWYLCEWW
Trigger: CCACCACTCACACAGATACCAGGAATGGTACCTCCGATGATGCCAGGAATGCTGATGCCAGCGGTGCCTGTCACCGCAGCGACGGCTCCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
ENST00000551111.1
CDS CCA 90 bp CAGGAGCCATGGCCTCACACAGACCCGAGGCAGAGAACAGCTCATTaGGTCACTGGTGATCATCCAGCTGCTGTAGGAGTGTCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: QEPWPHTDPRQRTAH*VTGDHPAAVGVSAA
Trigger: GGCGGCGGACACTCCTACAGCAGCTGGATGATCACCAGTGACCCAATGAGCTGTTCTCTGCCTCGGGTCTGTGTGAGGCCATGGCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS CCA 90 bp CGGCAGTGGAATCTGGAAGACCTGGCCAGGGAGCAACAGCGGAGATaGGTCCAGCTAGAAAAGGAGCAGGAGAGCCCACGGAGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: RQWNLEDLAREQQRR*VQLEKEQESPRREP
Trigger: TGGCTCTCTCCGTGGGCTCTCCTGCTCCTTTTCTAGCTGGACCCATCTCCGCTGTTGCTCCCTGGCCAGGTCTTCCAGATTCCACTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508736.1
ENST00000547764.1
CDS-3UTR CAA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAAGCTCTGCCTTGGACTaGAGCACGCTGGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGSSALD*STLGFS
Trigger: GGAGAAGCCCAGCGTGCTCAAGTCCAAGGCAGAGCT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATTTAGGGCCTGGATATaGCGGCGCCGGAGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGFRAWI*RRRSCL
Trigger: CAAGCAGCTCCGGCGCCGCAATATCCAGGCCCTAAA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAGGCTGGCCCAGCATGTaGGCAAAGCGGACATCAGTG +
Preference number: 5 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGGWPSM*AKRTSV
Trigger: CACTGATGTCCGCTTTGCCAACATGCTGGGCCAGCC...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 90 bp CCCCCTCTCCACCTCAGGAGACAAGCTCTTGCAAATGCAGGAAGGTaGAGCAGGGAGTCCCCAAGTGGTCTGAGGAGCACCCAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: PPLHLRRQALANAGR*SRESPSGLRSTQAS
Trigger: GGAAGCCTGGGTGCTCCTCAGACCACTTGGGGACTCCCTGCTTCACCTTCCTGCATTTGCAAGAGCTTGTCTCCTGAGGTGGAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS GCA 90 bp TCCCCCAAGTCCCATGGCCATGATACGGGACAGTGGTGCTATAGCTaGAGGGCACCAGCCACTTTCCACCATGACTGTGCGCTCGAGGGT +
Preference number: 5 (lower is better)
Translates to: SPKSHGHDTGQWCYS*RAPATFHHDCALEG
Trigger: ACCCTCGAGCGCACAGTCATGGTGGAAAGTGGCTGGTGCCCTGCAGCTATAGCACCACTGTCCCGTATCATGGCCATGGGACTTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS GCA 90 bp CTCGCCACTTCCCCCAAGTCCCATGGCCATGATACGGGACAGTGGTaGTATAGCTGCAGGGCACCAGCCACTTTCCACCATGACTGTGCG +
Preference number: 5 (lower is better)
Translates to: LATSPKSHGHDTGQW*YSCRAPATFHHDCA
Trigger: CGCACAGTCATGGTGGAAAGTGGCTGGTGCCCTGCAGCTATAGCACCACTGTCCCGTATCATGGCCATGGGACTTGGGGGAAGTGGCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS GCA 90 bp GTAAAGCGGCCCACGATCCTCCATCCGCTCCTCAGAGAGCCTCTCTaGCCTTTCTGTCCGCCACATCTCCCTGGCTACATTATCTCCCCG +
Preference number: 5 (lower is better)
Translates to: VKRPTILHPLLREPL*PFCPPHLPGYIISP
Trigger: CGGGGAGATAATGTAGCCAGGGAGATGTGGCGGACAGAAAGGGCAGAGAGGCTCTCTGAGGAGCGGATGGAGGATCGTGGGCCGCTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000547764.1
ENST00000551063.5
ENST00000552301.1
CDS CCA 90 bp ACAAGCTCTTGCAAATGCAGGAAGGTGAAGCAGGGAGTCCCCAAGTaGTCTGAGGAGCACCCAGGCTTCCAAAGGGAACGGGCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TSSCKCRKVKQGVPK*SEEHPGFQRERALG
Trigger: CCCCAGCGCCCGTTCCCTTTGGAAGCCTGGGTGCTCCTCAGACCACTTGGGGACTCCCTGCTTCACCTTCCTGCATTTGCAAGAGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS CCA 90 bp TTGCCTGCGTCCAGTGCGGCAGCCCTCTTGTCAAAGCTTATGACGTaGGCGAAGTCCTCAAAGGCCGTGTTCACCTCCACGCAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LPASSAAALLSKLMT*AKSSKAVFTSTQKP
Trigger: GGGCTTCTGCGTGGAGGTGAACACGGCCTTTGAGGACTTCGCCCACGTCATAAGCTTTGACAAGAGGGCTGCCGCACTGGACGCAGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380281.5
ENST00000548399.1
ENST00000548825.7
ENST00000549547.1
CDS CCA 90 bp ATAAGGTCCTGTGCAACCCTCAGACTCCTATACCTCGTGGGAATTTaGAAGTCGAAATCCAGTCCGCGGTCCCGCCCCTCCCCGGGTCGC +
Preference number: 5 (lower is better)
Translates to: IRSCATLRLLYLVGI*KSKSSPRSRPSPGR
Trigger: GCGACCCGGGGAGGGGCGGGACCGCGGACTGGATTTCGACTTCCAAATTCCCACGAGGTATAGGAGTCTGAGGGTTGCACAGGACCTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547764.1
ENST00000551063.5
ENST00000552301.1
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGTGGTGGCGCCCCCATaGGTGGAAGCATTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSVVAPP*VEALGA
Trigger: TGCCCCCAATGCTTCCACCAATGGGGGCGCCACCAC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAAGGTCATCCAGATCCTaGGGCCGGGTCCAGCGGGAC +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALRSSRS*GRVQRD
Trigger: GTCCCGCTGGACCCGGCCCAAGGATCTGGATGACCT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATTTGCCTTCTCCCGGTaGCTCCAACTGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGFAFSR*LQLRPD
Trigger: GTCTGGCCTCAGTTGGAGCAACCGGGAGAAGGCAAA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGATTGGAGGGGACAGCCTaGTCCCTCAGCAGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGLEGTA*SLSSSL
Trigger: CAAGGAACTGCTGAGGGACAAGGCTGTCCCCTCCAA...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTGTCTGCTTGGCCTCTTaGGCCCTTAGCCGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSVCLAS*ALSRAS
Trigger: GGAGGCCCGGCTAAGGGCCAAAGAGGCCAAGCAGAC...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCGGCGCCGGAGCTGCTaGGCCTGTTCCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSRRRSC*ACSFSF
Trigger: GAAGGAGAAGGAACAGGCCAAGCAGCTCCGGCGCCG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCCGATTCTTGCGTTGTaGGCGTCGCTCCCGAAGCCG +
Preference number: 5 (lower is better)
Translates to: WHIPPISGLGLRARTALVPILAL*ASLPKP
Trigger: CGGCTTCGGGAGCGACGCCAACAACGCAAGAATCGG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAAAGGTCAGCTTGATGTaGCCTGCGTCCAGTGCGGCA +
Preference number: 5 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGKVSLM*PASSAA
Trigger: TGCCGCACTGGACGCAGGCAACATCAAGCTGACCTT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACCATGCTTTCGGCCTTaGGTGTGGAGGTGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGPCFRP*VWRCWH
Trigger: ATGCCAGCACCTCCACACCAAAGGCCGAAAGCATGG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 90 bp CCTGTAGGAACTCCCGGAAGAGCCGGATCCGCTCCGACTCCAGGGTaGTCTGCTCAAAGGCTGAGTCACACACAAAACGCTCACGGACCT +
Preference number: 5 (lower is better)
Translates to: PVGTPGRAGSAPTPG*SAQRLSHTQNAHGP
Trigger: AGGTCCGTGAGCGTTTTGTGTGTGACTCAGCCTTTGAGCAGATCACCCTGGAGTCGGAGCGGATCCGGCTCTTCCGGGAGTTCCTACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548825.7
ENST00000549547.1
CDS TCA 90 bp GGGTGGCGAGCACAGGGACAGCACAGGACACATCCCCTTCTCCAGTaGAGCATTCCACCACTCGTGTCACAGCACATCACCTCCATGCTC +
Preference number: 5 (lower is better)
Translates to: GWRAQGQHRTHPLLQ*SIPPLVSQHITSML
Trigger: GAGCATGGAGGTGATGTGCTGTGACACGAGTGGTGGAATGCTTCACTGGAGAAGGGGATGTGTCCTGTGCTGTCCCTGTGCTCGCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508736.1
ENST00000527253.2
CDS TCA 90 bp AAAGGAAGGGCCAGAAAGCCCAGCTCAGGACCTCTGCCTTGGACTTaGGCACGCTGGGCTTCTCCCACACGGACTGCTTGTCGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: KGRARKPSSGPLPWT*ARWASPTRTACRQH
Trigger: ATGCTGACGACAAGCAGTCCGTGTGGGAGAAGCCCAGCGTGCTCAAGTCCAAGGCAGAGGTCCTGAGCTGGGCTTTCTGGCCCTTCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551111.1
CDS GCA 90 bp GCTTCTCCCACACGGACTGCTTGTCGTCAGCATTGTAGTAGTAGATaGGCCCATCTGGGGCCACATGCTCACTCCATAGGGCCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: ASPTRTACRQHCSSR*AHLGPHAHSIGPSE
Trigger: CTCCGAGGGCCCTATGGAGTGAGCATGTGGCCCCAGATGGGCGCATCTACTACTACAATGCTGACGACAAGCAGTCCGTGTGGGAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548436.5
ENST00000548825.7
ENST00000551111.1
ENST00000551320.1
CDS GCA 90 bp AGGAACTCCCGGAAGAGCCGGATCCGCTCCGACTCCAGGGTGATCTaGTCAAAGGCTGAGTCACACACAAAACGCTCACGGACCTCTTCC +
Preference number: 5 (lower is better)
Translates to: RNSRKSRIRSDSRVI*SKAESHTKRSRTSS
Trigger: GGAAGAGGTCCGTGAGCGTTTTGTGTGTGACTCAGCCTTTGAGCAGATCACCCTGGAGTCGGAGCGGATCCGGCTCTTCCGGGAGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
ENST00000549547.1
CDS CCA 90 bp TACCTGCTGGCCCCTAGTGCTTACCGCTGCGGTGACAGGCACCGCTaGCATCAGCATTCCTGGCATCATCGGAGGTACCATTCCTGGTAT +
Preference number: 5 (lower is better)
Translates to: YLLAPSAYRCGDRHR*HQHSWHHRRYHSWY
Trigger: ATACCAGGAATGGTACCTCCGATGATGCCAGGAATGCTGATGCCAGCGGTGCCTGTCACCGCAGCGGTAAGCACTAGGGGCCAGCAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548436.5
ENST00000551418.5
CDS CCA 90 bp ATTGGGACAGGAGCAGCTGCAAGTGGATGGGATAGGAGCCATCAGTaGGATGGGCAAGTTCTCCAGCCAGTCAGGGGAGCTAAGGGGACC +
Preference number: 5 (lower is better)
Translates to: IGTGAAASGWDRSHQ*DGQVLQPVRGAKGT
Trigger: GGTCCCCTTAGCTCCCCTGACTGGCTGGAGAACTTGCCCATCCCACTGATGGCTCCTATCCCATCCACTTGCAGCTGCTCCTGTCCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551111.1
CDS-3UTR CAA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTTTAGGGCCTGGATATaGCGGCGCCGGAGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: WHIPPISGLGLRARTALVFRAWI*RRRSCL
Trigger: CAAGCAGCTCCGGCGCCGCAATATCCAGGCCCTAAA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACCGATTCTTGCGTTGTaGGCGTCGCTCCCGAAGCCG +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALPILAL*ASLPKP
Trigger: CGGCTTCGGGAGCGACGCCAACAACGCAAGAATCGG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCAAGGCCTCCCGATTCTaGCGTTGTTGGCGTCGCTCC +
Preference number: 5 (lower is better)
Translates to: WHIPPISGLGLRARTALVKASRF*RCWRRS
Trigger: GGAGCGACGCCAACAACGCAAGAATCGGGAGGCCTT...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGAAGTGCGGCAGCCCTCTaGTCAAAGCTTATGACGTGG +
Preference number: 5 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGSAAAL*SKLMTW
Trigger: CCACGTCATAAGCTTTGACAAGAGGGCTGCCGCACT...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 90 bp GAAGAGCCGGATCCGCTCCGACTCCAGGGTGATCTGCTCAAAGGCTaGGTCACACACAAAACGCTCACGGACCTTGAACGAGGAGAGCAC +
Preference number: 5 (lower is better)
Translates to: EEPDPLRLQGDLLKG*VTHKTLTDLERGEH
Trigger: GTGCTCTCCTCGTTCAAGGTCCGTGAGCGTTTTGTGTGTGACTCAGCCTTTGAGCAGATCACCCTGGAGTCGGAGCGGATCCGGCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546626.1
CDS TCA 90 bp GGGAACCGACTGAGCCGGGACTCGCGTGATGCCGTGCTAGGTTCCTaGGAGCCAAAGAACTCCGGAGAGGTAGAAAAACTCCTGACACGA +
Preference number: 5 (lower is better)
Translates to: GNRLSRDSRDAVLGS*EPKNSGEVEKLLTR
Trigger: TCGTGTCAGGAGTTTTTCTACCTCTCCGGAGTTCTTTGGCTCTCAGGAACCTAGCACGGCATCACGCGAGTCCCGGCTCAGTCGGTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551063.5
CDS GCA 90 bp TCTTCAGAGGCCCCCTCTCCACCTCAGGAGACAAGCTCTTGCAAATaGAGGAAGGTGAAGCAGGGAGTCCCCAAGTGGTCTGAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: SSEAPSPPQETSSCK*RKVKQGVPKWSEEH
Trigger: GTGCTCCTCAGACCACTTGGGGACTCCCTGCTTCACCTTCCTGCATTTGCAAGAGCTTGTCTCCTGAGGTGGAGAGGGGGCCTCTGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS GCA 90 bp CTGACTGCTGGATATAGCTCCATCCAGGTGGACATAGAGTGCAGCTaGCCTGTCTCATGCAGCTCGTCCAGGAAGGTCTGGAAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: LTAGYSSIQVDIECS*PVSCSSSRKVWKAS
Trigger: GGAGGCCTTCCAGACCTTCCTGGACGAGCTGCATGAGACAGGGCAGCTGCACTCTATGTCCACCTGGATGGAGCTATATCCAGCAGTCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS GCA 90 bp ACTCAGAGCCTGAGGGTGAGTGGGAACGCTTGTGATGGTGCTTCTTaGCTTTCCTGCCATGCTTTCGGCCTTTGGTGTGGAGGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: TQSLRVSGNACDGAS*LSCHAFGLWCGGAG
Trigger: GCCAGCACCTCCACACCAAAGGCCGAAAGCATGGCAGGAAAGGCAAGAAGCACCATCACAAGCGTTCCCACTCACCCTCAGGCTCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548825.7
CDS GCA 90 bp AGAATGGAGGTCATAGTCCTGCATTCCAAGTCAGACTCACGGGACTaGAGGGCAGAGCCTGCTACCTGCTGGCCCCTAGTGCTTACCGCT +
Preference number: 5 (lower is better)
Translates to: RMEVIVLHSKSDSRD*RAEPATCWPLVLTA
Trigger: AGCGGTAAGCACTAGGGGCCAGCAGGTAGCAGGCTCTGCCCTGCAGTCCCGTGAGTCTGACTTGGAATGCAGGACTATGACCTCCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548436.5
ENST00000551418.5
CDS GCA 90 bp GAGCCCTGGGCAGATCAGCAGATACATGTCAGTGCAGAGGTTCTCTaGCCTCCAGAAGCCCTCGTCTGGGAATTCGAGAGAGGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: EPWADQQIHVSAEVL*PPEALVWEFERGGG
Trigger: TCCTCCTCCTCTCTCGAATTCCCAGACGAGGGCTTCTGGAGGGCAGAGAACCTCTGCACTGACATGTATCTGCTGATCTGCCCAGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS GCA 90 bp AGGAACTCCCGGAAGAGCCGGATCCGCTCCGACTCCAGGGTGATCTaGTCAAAGGCTGAGTCACACACAAAACGCTCACGGACCTTGAAC +
Preference number: 5 (lower is better)
Translates to: RNSRKSRIRSDSRVI*SKAESHTKRSRTLN
Trigger: GTTCAAGGTCCGTGAGCGTTTTGTGTGTGACTCAGCCTTTGAGCAGATCACCCTGGAGTCGGAGCGGATCCGGCTCTTCCGGGAGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546626.1
CDS CCA 90 bp GTTCTCGCCACTTCCCCCAAGTCCCATGGCCATGATACGGGACAGTaGTGCTATAGCTGCAGGGCACCAGCCACTTTCCACCATGACTGT +
Preference number: 5 (lower is better)
Translates to: VLATSPKSHGHDTGQ*CYSCRAPATFHHDC
Trigger: ACAGTCATGGTGGAAAGTGGCTGGTGCCCTGCAGCTATAGCACCACTGTCCCGTATCATGGCCATGGGACTTGGGGGAAGTGGCGAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS CCA 90 bp AGTGCTTACCGCTGCGGTGACAGGCACCGCTGGCATCAGCATTCCTaGCATCATCGGAGGTACCATTCCTGGTATCTGTGTGAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SAYRCGDRHRWHQHS*HHRRYHSWYLCEWW
Trigger: CCACCACTCACACAGATACCAGGAATGGTACCTCCGATGATGCCAGGAATGCTGATGCCAGCGGTGCCTGTCACCGCAGCGGTAAGCACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548436.5
ENST00000551418.5
CDS CCA 90 bp GCCCCAGTAAATAGTCCCCTGGTCCCATCAATATCCCAGACTCCTTaGCATCCCAACAGGCATGATCCAGGGTGGGCTCCAGTCCACGGT +
Preference number: 5 (lower is better)
Translates to: APVNSPLVPSISQTP*HPNRHDPGWAPVHG
Trigger: ACCGTGGACTGGAGCCCACCCTGGATCATGCCTGTTGGGATGCCAAGGAGTCTGGGATATTGATGGGACCAGGGGACTATTTACTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS CCA 90 bp CGGAGAGATGGTGGGGGCAGCTCCTCTTCTTCTGACTCAGAGCCCTaGGCAGATCAGCAGATACATGTCAGTGCAGAGGTTCTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: RRDGGGSSSSSDSEP*ADQQIHVSAEVLCP
Trigger: AGGGCAGAGAACCTCTGCACTGACATGTATCTGCTGATCTGCCCAGGGCTCTGAGTCAGAAGAAGAGGAGCTGCCCCCACCATCTCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS CCA 90 bp TTCCACAGGTGCAGCCCTCCCAATCCAGTCTACCCTCAAAGGAGCTaGGGCTTGTGGAGGGCATCCTCTCAGTCTGGGACAACAGTTCTC +
Preference number: 5 (lower is better)
Translates to: FHRCSPPNPVYPQRS*GLWRASSQSGTTVL
Trigger: GAGAACTGTTGTCCCAGACTGAGAGGATGCCCTCCACAAGCCCCAGCTCCTTTGAGGGTAGACTGGATTGGGAGGGCTGCACCTGTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTAGCTCTGCCTTGGACTaGAGCACGCTGGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSSSALD*STLGFS
Trigger: GGAGAAGCCCAGCGTGCTCAAGTCCAAGGCAGAGCT...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAAGCTCTGCCTTGGACTaGAGCACGCTGGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALSSALD*STLGFS
Trigger: GGAGAAGCCCAGCGTGCTCAAGTCCAAGGCAGAGCT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTTTGCCTTCTCCCGGTaGCTCCAACTGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: WHIPPISGLGLRARTALVFAFSR*LQLRPD
Trigger: GTCTGGCCTCAGTTGGAGCAACCGGGAGAAGGCAAA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTGCTGCAGGGTCTGCTaGGCCTCTTTGGCCCTTAGC +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSCCRVC*ASLALS
Trigger: GCTAAGGGCCAAAGAGGCCAAGCAGACCCTGCAGCA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTATTTAGGGCCTGGATATaGCGGCGCCGGAGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALFRAWI*RRRSCL
Trigger: CAAGCAGCTCCGGCGCCGCAATATCCAGGCCCTAAA...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACTCCCGATTCTTGCGTaGTTGGCGTCGCTCCCGAAG +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALLPILA*LASLPK
Trigger: CTTCGGGAGCGACGCCAACAACGCAAGAATCGGGAG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTCCCGATTCTTGCGTaGTTGGCGTCGCTCCCGAAG +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSLPILA*LASLPK
Trigger: CTTCGGGAGCGACGCCAACAACGCAAGAATCGGGAG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAAAGGCCTCCCGATTCTaGCGTTGTTGGCGTCGCTCC +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALKASRF*RCWRRS
Trigger: GGAGCGACGCCAACAACGCAAGAATCGGGAGGCCTT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGGCTGGCCCAGCATGTaGGCAAAGCGGACATCAGTG +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALGWPSM*AKRTSV
Trigger: CACTGATGTCCGCTTTGCCAACATGCTGGGCCAGCC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp GAATCAAGTGAGGAAGAGGGCTCAGAGCCTGACTCTGAGGGGTTCCGCCTCCTCAGTGCGGCAGCCCTCTaGTCAAAGCTTATGACGTGG +
Preference number: 5 (lower is better)
Translates to: ESSEEEGSEPDSEGFRLLSAAAL*SKLMTW
Trigger: CCACGTCATAAGCTTTGACAAGAGGGCTGCCGCACT...GAGGAGGCGGAACCCCTCAGAGTCAGGCTCTGAGCCCTCTTCCTCACTTGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR CAA 90 bp GGGCAGCACCCCCACTTTCAACTGAATCAAGTGAGGAAGAGGGCTCAGAGCCTGAAGGTCAGCTTGATGTaGCCTGCGTCCAGTGCGGCA +
Preference number: 5 (lower is better)
Translates to: GQHPHFQLNQVRKRAQSLKVSLM*PASSAA
Trigger: TGCCGCACTGGACGCAGGCAACATCAAGCTGACCTT...CAGGCTCTGAGCCCTCTTCCTCACTTGATTCAGTTGAAAGTGGGGGTGCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS TCA 90 bp GCTCAGCAGCCAGAGGCTGCACTTCCAGCAGTTCATGGAGGTCCTTaGGAGCAGGAGGGATGCTCTGCTGAAGCAGGTAGAGATCTTAGG +
Preference number: 5 (lower is better)
Translates to: AQQPEAALPAVHGGP*EQEGCSAEAGRDLR
Trigger: CCTAAGATCTCTACCTGCTTCAGCAGAGCATCCCTCCTGCTCTCAAGGACCTCCATGAACTGCTGGAAGTGCAGCCTCTGGCTGCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS GCA 90 bp ACAAGGAGAACAGGAGCCTGGAGACCAAATACAGGCACCTGCAAATaGAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTGCACTTCCAGC +
Preference number: 5 (lower is better)
Translates to: TRRTGAWRPNTGTCK*RRPKSSAARGCTSS
Trigger: GCTGGAAGTGCAGCCTCTGGCTGCTGAGCTCTTTGGTCGCCTGCATTTGCAGGTGCCTGTATTTGGTCTCCAGGCTCCTGTTCTCCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS GCA 90 bp GCTTACTCACTGAGGGTGAGTGGGAACGCTTGTGATGGTGCTTCTTaGCTTTCCTGCCATGCTTTCGGCCTTTGGTGTGGAGGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: AYSLRVSGNACDGAS*LSCHAFGLWCGGAG
Trigger: GCCAGCACCTCCACACCAAAGGCCGAAAGCATGGCAGGAAAGGCAAGAAGCACCATCACAAGCGTTCCCACTCACCCTCAGTGAGTAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS CCA 90 bp ATACATGTCAGTGCAGAGGTTCTCTGCCCTCCAGAAGCCCTCGTCTaGGAATTCGAGAGAGGAGGAGGACCCAGGGCCAAAGGAATCCTC +
Preference number: 5 (lower is better)
Translates to: IHVSAEVLCPPEALV*EFERGGGPRAKGIL
Trigger: GAGGATTCCTTTGGCCCTGGGTCCTCCTCCTCTCTCGAATTCCCAGACGAGGGCTTCTGGAGGGCAGAGAACCTCTGCACTGACATGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTTGGAGGGGACAGCCTaGTCCCTCAGCAGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSLEGTA*SLSSSL
Trigger: CAAGGAACTGCTGAGGGACAAGGCTGTCCCCTCCAA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTCGGCGCCGGAGCTGCTaGGCCTGTTCCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGRRRSC*ACSFSF
Trigger: GAAGGAGAAGGAACAGGCCAAGCAGCTCCGGCGCCG...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACACGTGGTTTGGAAGTaGACACTACTCATCCCATCC +
Preference number: 5 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGHVVWK*TLLIPS
Trigger: GGATGGGATGAGTAGTGTCAACTTCCAAACCACGTG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACTGGGACCACGTGGTTaGGAAGTTGACACTACTCAT +
Preference number: 5 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGLGPRG*EVDTTH
Trigger: ATGAGTAGTGTCAACTTCCAAACCACGTGGTCCCAG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTAAGGTCAGCTTGATGTaGCCTGCGTCCAGTGCGGCA +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSKVSLM*PASSAA
Trigger: TGCCGCACTGGACGCAGGCAACATCAAGCTGACCTT...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACCATGCTTTCGGCCTTaGGTGTGGAGGTGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALPCFRP*VWRCWH
Trigger: ATGCCAGCACCTCCACACCAAAGGCCGAAAGCATGG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp GTCCTCCAAGGGCAGCACCCCCACTTTCAACTGAATCAAGTGAGGAAGAGGGCTCCATGCTTTCGGCCTTaGGTGTGGAGGTGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: VLQGQHPHFQLNQVRKRAPCFRP*VWRCWH
Trigger: ATGCCAGCACCTCCACACCAAAGGCCGAAAGCATGG...AGCCCTCTTCCTCACTTGATTCAGTTGAAAGTGGGGGTGCTGCCCTTGGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR CAA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTTCTCATCGCTCTCCTaGCCAGCTTTCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: WHIPPISGLGLRARTALVFSSLS*PAFSSG
Trigger: CCCTGAGGAGAAAGCTGGCAAGGAGAGCGATGAGAA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp CATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCAGGGAGTAGGGGACCTGTCTTCTCCTTCTaGATTCCAAAGCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: HLWSGAEGKDCTSPGSRGPVFSF*IPKPGE
Trigger: TTCCCCAGGCTTTGGAATCAAGAAGGAGAAGACAGG...TCCCCTACTCCCTGGACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS GCA 90 bp TCAGTGCTGACTGCTGGATATAGCTCCATCCAGGTGGACATAGAGTaGAGCTGCCCTGTCTCATGCAGCTCGTCCAGGAAGGTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SVLTAGYSSIQVDIE*SCPVSCSSSRKVWK
Trigger: CTTCCAGACCTTCCTGGACGAGCTGCATGAGACAGGGCAGCTGCACTCTATGTCCACCTGGATGGAGCTATATCCAGCAGTCAGCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS GCA 90 bp CTCCAGCAGACTATTGAAGGTCAGCTTGATGTTGCCTGCGTCCAGTaGGGCAGCCCTCTTGTCAAAGCTTATGACGTGGGCGAAGTCCTC +
Preference number: 5 (lower is better)
Translates to: LQQTIEGQLDVACVQ*GSPLVKAYDVGEVL
Trigger: GAGGACTTCGCCCACGTCATAAGCTTTGACAAGAGGGCTGCCGCACTGGACGCAGGCAACATCAAGCTGACCTTCAATAGTCTGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548399.1
ENST00000548825.7
ENST00000549547.1
CDS GCA 90 bp CTGAGGGTGAGTGGGAACGCTTGTGATGGTGCTTCTTGCCTTTCCTaGCATGCTTTCGGCCTTTGGTGTGGAGGTGCTGGCATTCAGTCT +
Preference number: 5 (lower is better)
Translates to: LRVSGNACDGASCLS*HAFGLWCGGAGIQS
Trigger: AGACTGAATGCCAGCACCTCCACACCAAAGGCCGAAAGCATGGCAGGAAAGGCAAGAAGCACCATCACAAGCGTTCCCACTCACCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548825.7
ENST00000551269.1
CDS CCA 90 bp TGGAAGTTGACACTACTCATCCCATCCAGGATGCTCTTTAGGGCCTaGATATTGCGGCGCCGGAGCTGCTTGGCCTGTTCCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: WKLTLLIPSRMLFRA*ILRRRSCLACSFSF
Trigger: GAAGGAGAAGGAACAGGCCAAGCAGCTCCGGCGCCGCAATATCCAGGCCCTAAAGAGCATCCTGGATGGGATGAGTAGTGTCAACTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS CCA 90 bp GCTTGTGATGGTGCTTCTTGCCTTTCCTGCCATGCTTTCGGCCTTTaGTGTGGAGGTGCTGGCATTCAGTCTGCTCCAGCACCTGTAGGA +
Preference number: 5 (lower is better)
Translates to: ACDGASCLSCHAFGL*CGGAGIQSAPAPVG
Trigger: TCCTACAGGTGCTGGAGCAGACTGAATGCCAGCACCTCCACACCAAAGGCCGAAAGCATGGCAGGAAAGGCAAGAAGCACCATCACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261897.5
ENST00000380281.5
CDS CCA 90 bp TGTACTCTTTCCAGGGACATTGGGACAGGAGCAGCTGCAAGTGGATaGGATAGGAGCCATCAGTGGGATGGGCAAGTTCTCCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: CTLSRDIGTGAAASG*DRSHQWDGQVLQPV
Trigger: GACTGGCTGGAGAACTTGCCCATCCCACTGATGGCTCCTATCCCATCCACTTGCAGCTGCTCCTGTCCCAATGTCCCTGGAAAGAGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551111.1
CDS CCA 90 bp CTACCCTCAAAGGAGCTGGGGCTTGTGGAGGGCATCCTCTCAGTCTaGGACAACAGTTCTCCAGCTTCTACGCTCACAGCAACTGCTTAC +
Preference number: 5 (lower is better)
Translates to: LPSKELGLVEGILSV*DNSSPASTLTATAY
Trigger: GTAAGCAGTTGCTGTGAGCGTAGAAGCTGGAGAACTGTTGTCCCAGACTGAGAGGATGCCCTCCACAAGCCCCAGCTCCTTTGAGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTAGAGTCGTTAGTTTGTaGATGGCCTGGGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSRVVSL*MAWAGS
Trigger: GCTCCCAGCCCAGGCCATCAACAAACTAACGACTCT...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACACAGAGTCGTTAGTTaGTTGATGGCCTGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALHRVVS*LMAWAG
Trigger: CCCAGCCCAGGCCATCAACAAACTAACGACTCTGTG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS-3UTR CAA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTCCGATTCTTGCGTTGTaGGCGTCGCTCCCGAAGCCG +
Preference number: 5 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGPILAL*ASLPKP
Trigger: CGGCTTCGGGAGCGACGCCAACAACGCAAGAATCGG...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAAGTGCGGCAGCCCTCTaGTCAAAGCTTATGACGTGG +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALSAAAL*SKLMTW
Trigger: CCACGTCATAAGCTTTGACAAGAGGGCTGCCGCACT...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTTCTCATCGCTCTCCTaGCCAGCTTTCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSFSSLS*PAFSSG
Trigger: CCCTGAGGAGAAAGCTGGCAAGGAGAGCGATGAGAA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTATTCTCATCGCTCTCCTaGCCAGCTTTCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALFSSLS*PAFSSG
Trigger: CCCTGAGGAGAAAGCTGGCAAGGAGAGCGATGAGAA...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS GCA 90 bp CTCTGCTTTCTCCAGCAGACTATTGAAGGTCAGCTTGATGTTGCCTaGGTCCAGTGCGGCAGCCCTCTTGTCAAAGCTTATGACGTGGGC +
Preference number: 5 (lower is better)
Translates to: LCFLQQTIEGQLDVA*VQCGSPLVKAYDVG
Trigger: GCCCACGTCATAAGCTTTGACAAGAGGGCTGCCGCACTGGACGCAGGCAACATCAAGCTGACCTTCAATAGTCTGCTGGAGAAAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548399.1
ENST00000548825.7
ENST00000549547.1
CDS GCA 90 bp CTTCTTGCTTGGGCAGGTAGAGGAAGTTCTTTCTACTTCCACAGGTaGAGCCCTCCCAATCCAGTCTACCCTCAAAGGAGCTGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: LLAWAGRGSSFYFHR*SPPNPVYPQRSWGL
Trigger: CAAGCCCCAGCTCCTTTGAGGGTAGACTGGATTGGGAGGGCTGCACCTGTGGAAGTAGAAAGAACTTCCTCTACCTGCCCAAGCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS CCA 90 bp GCTTGTGATGGTGCTTCTTGCCTTTCCTGCCATGCTTTCGGCCTTTaGTGTGGAGGTGCTGGCATTCAGTCTCCAGCACCTGTAGGAACT +
Preference number: 5 (lower is better)
Translates to: ACDGASCLSCHAFGL*CGGAGIQSPAPVGT
Trigger: AGTTCCTACAGGTGCTGGAGACTGAATGCCAGCACCTCCACACCAAAGGCCGAAAGCATGGCAGGAAAGGCAAGAAGCACCATCACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546626.1
ENST00000548825.7
ENST00000551269.1
CDS-3UTR CAA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTCCATTGGTGGAAGCATaGGGGGCAGGATGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGPLVEA*GAGCQV
Trigger: CACCTGGCATCCTGCCCCCAATGCTTCCACCAATGG...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTGCTGCAGGGTCTGCTaGGCCTCTTTGGCCCTTAGC +
Preference number: 5 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGCCRVC*ASLALS
Trigger: GCTAAGGGCCAAAGAGGCCAAGCAGACCCTGCAGCA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCACGTGGTTTGGAAGTaGACACTACTCATCCCATCC +
Preference number: 5 (lower is better)
Translates to: WHIPPISGLGLRARTALVHVVWK*TLLIPS
Trigger: GGATGGGATGAGTAGTGTCAACTTCCAAACCACGTG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGGCTGGCCCAGCATGTaGGCAAAGCGGACATCAGTG +
Preference number: 5 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGGWPSM*AKRTSV
Trigger: CACTGATGTCCGCTTTGCCAACATGCTGGGCCAGCC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCTATTGAAGGTCAGCTaGATGTTGCCTGCGTCCAGT +
Preference number: 5 (lower is better)
Translates to: WHIPPISGLGLRARTALVLLKVS*MLPASS
Trigger: ACTGGACGCAGGCAACATCAAGCTGACCTTCAATAG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCCTGTCTTCTCCTTCTaGATTCCAAAGCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: WHIPPISGLGLRARTALVPVFSF*IPKPGE
Trigger: TTCCCCAGGCTTTGGAATCAAGAAGGAGAAGACAGG...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 90 bp TTAGCTACCACCTGGCCTGGTTCAAACTGGGGAAGGTGGACTTCTTaGGATCCTATGGAGGCATTTCCAGGGAGGGTGAGGAATGGTCAG +
Preference number: 5 (lower is better)
Translates to: LATTWPGSNWGRWTS*DPMEAFPGRVRNGQ
Trigger: CTGACCATTCCTCACCCTCCCTGGAAATGCCTCCATAGGATCTCAAGAAGTCCACCTTCCCCAGTTTGAACCAGGCCAGGTGGTAGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551111.1
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTTGCCTGTGTCCGACTaGTACTCTTTCCAGGGACAT +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSLPVSD*YSFQGH
Trigger: ATGTCCCTGGAAAGAGTACAAGTCGGACACAGGCAA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTTTGCCTTCTCCCGGTaGCTCCAACTGAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGFAFSR*LQLRPD
Trigger: GTCTGGCCTCAGTTGGAGCAACCGGGAGAAGGCAAA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTTGGAGGGGACAGCCTaGTCCCTCAGCAGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGLEGTA*SLSSSL
Trigger: CAAGGAACTGCTGAGGGACAAGGCTGTCCCCTCCAA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACACGTGGTTTGGAAGTaGACACTACTCATCCCATCC +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALHVVWK*TLLIPS
Trigger: GGATGGGATGAGTAGTGTCAACTTCCAAACCACGTG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTGGGACCACGTGGTTaGGAAGTTGACACTACTCAT +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSLGPRG*EVDTTH
Trigger: ATGAGTAGTGTCAACTTCCAAACCACGTGGTCCCAG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACTGGGACCACGTGGTTaGGAAGTTGACACTACTCAT +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALLGPRG*EVDTTH
Trigger: ATGAGTAGTGTCAACTTCCAAACCACGTGGTCCCAG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTATTGAAGGTCAGCTaGATGTTGCCTGCGTCCAGT +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSLLKVS*MLPASS
Trigger: ACTGGACGCAGGCAACATCAAGCTGACCTTCAATAG...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTCCATGCTTTCGGCCTTaGGTGTGGAGGTGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGPCFRP*VWRCWH
Trigger: ATGCCAGCACCTCCACACCAAAGGCCGAAAGCATGG...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTACCTGTCTTCTCCTTCTaGATTCCAAAGCCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALPVFSF*IPKPGE
Trigger: TTCCCCAGGCTTTGGAATCAAGAAGGAGAAGACAGG...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTACACCAAGAGCAACCTaGAGAGGTGCCAACAATGGT +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSTPRAT*RGANNG
Trigger: ACCATTGTTGGCACCTCTCAAGGTTGCTCTTGGTGT...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 90 bp TCTTTTCATCATGGAATCGTGCCTTCAACTCCTCCACATAGAACTTaGATAAGTCCAGAGGGGTGGAGCCCGGCTGGCCCAGCATGTTGG +
Preference number: 5 (lower is better)
Translates to: SFHHGIVPSTPPHRT*ISPEGWSPAGPACW
Trigger: CCAACATGCTGGGCCAGCCGGGCTCCACCCCTCTGGACTTATTCAAGTTCTATGTGGAGGAGTTGAAGGCACGATTCCATGATGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 90 bp GGATGCTCTGCTGAAGCAGGTAGAGATCTTAGGGGGAAGGTACCATaGCCTTCTCCTGATGAAGCAGGCCTTGGAGTTCCAGCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: GCSAEAGRDLRGKVP*PSPDEAGLGVPAEE
Trigger: TTCTTCAGCTGGAACTCCAAGGCCTGCTTCATCAGGAGAAGGTCATGGTACCTTCCCCCTAAGATCTCTACCTGCTTCAGCAGAGCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS-3UTR CAA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTTCTCCAGCAGACTATaGAAGGTCAGCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: WHIPPISGLGLRARTALVFSSRL*KVSLML
Trigger: CAACATCAAGCTGACCTTCAATAGTCTGCTGGAGAA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp GAGCCCCGTCCTCCAAGGGCAGCACCCCCACTTTCAACTGAATCAAGTGAGGAATTCTCCAGCAGACTATaGAAGGTCAGCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: EPRPPRAAPPLSTESSEEFSSRL*KVSLML
Trigger: CAACATCAAGCTGACCTTCAATAGTCTGCTGGAGAA...TTCCTCACTTGATTCAGTTGAAAGTGGGGGTGCTGCCCTTGGAGGACGGGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR CAA 90 bp ACATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCCTTGTCCTGTTCTaGTTCTTTCTCATCGCTCTC +
Preference number: 5 (lower is better)
Translates to: TWHIPPISGLGLRARTALVLVLF*FFLIAL
Trigger: GAGAGCGATGAGAAAGAACAAGAACAGGACAAGGAC...TAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGGGAGTAGGGGACCCTaGAACACCAAGAGCAACCTT +
Preference number: 5 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGGSRGP*NTKSNL
Trigger: AAGGTTGCTCTTGGTGTTCAAGGGTCCCCTACTCCC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 90 bp GAGGGTGAGGAATGGTCAGGGACCTTGGGATCAGAGGAACCATCATaGATATGGTTAGAGACTAAGGGAAGGCCAAGGACTTGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: EGEEWSGTLGSEEPS*IWLETKGRPRTWKG
Trigger: ACCCTTCCAAGTCCTTGGCCTTCCCTTAGTCTCTAACCATATTCATGATGGTTCCTCTGATCCCAAGGTCCCTGACCATTCCTCACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551111.1
CDS-3UTR CAA 90 bp ATGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTTTCTCCAGCAGACTATaGAAGGTCAGCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: MAYTTHLWSGAEGKDCTSFSSRL*KVSLML
Trigger: CAACATCAAGCTGACCTTCAATAGTCTGCTGGAGAA...ACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 90 bp GGCCAAGCTAGGGGGTTGATATCTCAGAGGGTTTCAATCTGTGCATaGGAATCTTCCTTTGCAGATAGTTTCTTTTCCCTCCCGGCGACC +
Preference number: 5 (lower is better)
Translates to: GQARGLISQRVSICA*ESSFADSFFSLPAT
Trigger: GGTCGCCGGGAGGGAAAAGAAACTATCTGCAAAGGAAGATTCTCATGCACAGATTGAAACCCTCTGAGATATCAACCCCCTAGCTTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552301.1
CDS GCA 90 bp GGGCCTGATAGAAGTTTCTCTAAAGGCTCTGGAGGAGTCAAACAATaGATAAGGTCCTGTGCAACCCTCAGACTCCTATACCTCGTGGGA +
Preference number: 5 (lower is better)
Translates to: GPDRSFSKGSGGVKQ*IRSCATLRLLYLVG
Trigger: TCCCACGAGGTATAGGAGTCTGAGGGTTGCACAGGACCTTATGCATTGTTTGACTCCTCCAGAGCCTTTAGAGAAACTTCTATCAGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547764.1
ENST00000551063.5
ENST00000552301.1
CDS-3UTR CAA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTTGCCTGTGTCCGACTaGTACTCTTTCCAGGGACAT +
Preference number: 5 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGLPVSD*YSFQGH
Trigger: ATGTCCCTGGAAAGAGTACAAGTCGGACACAGGCAA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp CCAGCTTTCTCCTCAGGGTCTGTCTCACTCTCAGGACTATTCGACTTGTGTCTTCTATTGAAGGTCAGCTaGATGTTGCCTGCGTCCAGT +
Preference number: 5 (lower is better)
Translates to: PAFSSGSVSLSGLFDLCLLLKVS*MLPASS
Trigger: ACTGGACGCAGGCAACATCAAGCTGACCTTCAATAG...AAGACACAAGTCGAATAGTCCTGAGAGTGAGACAGACCCTGAGGAGAAAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR CAA 90 bp TGGCATATACCACCCATCTCTGGTCTGGGGCTGAGGGCAAGGACTGCACTAGTCTCAGGACTATTCGACTaGTGTCTTCTCTTCTTAGTT +
Preference number: 5 (lower is better)
Translates to: WHIPPISGLGLRARTALVSGLFD*CLLFLV
Trigger: AACTAAGAAGAGAAGACACAAGTCGAATAGTCCTGA...GACTAGTGCAGTCCTTGCCCTCAGCCCCAGACCAGAGATGGGTGGTATATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp GGGCAGCACCCCCACTTTCAACTGAATCAAGTGAGGAAGAGGGCTCAGAGCCTGTCAGGACTATTCGACTaGTGTCTTCTCTTCTTAGTT +
Preference number: 5 (lower is better)
Translates to: GQHPHFQLNQVRKRAQSLSGLFD*CLLFLV
Trigger: AACTAAGAAGAGAAGACACAAGTCGAATAGTCCTGA...CAGGCTCTGAGCCCTCTTCCTCACTTGATTCAGTTGAAAGTGGGGGTGCTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549547.1
CDS-3UTR CAA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTACACCAAGAGCAACCTaGAGAGGTGCCAACAATGGT +
Preference number: 5 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGTPRAT*RGANNG
Trigger: ACCATTGTTGGCACCTCTCAAGGTTGCTCTTGGTGT...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS-3UTR CAA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTCAGGAGACAAGCTCTaGCAAATGCAGGAAGGTGAA +
Preference number: 5 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGSGDKL*QMQEGE
Trigger: TTCACCTTCCTGCATTTGCAAGAGCTTGTCTCCTGA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS-3UTR CAA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTGTCCTTGTCCTGTTCTaGTTCTTTCTCATCGCTCTC +
Preference number: 5 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGVLVLF*FFLIAL
Trigger: GAGAGCGATGAGAAAGAACAAGAACAGGACAAGGAC...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 90 bp CCAAGGGAGAATCGCATAGCAGCTCCATTCTTCGTTCTCCTCAAGTaGGAGTATTTTGTTGAGACAACTCCCGAGGCTCATTCCTTCACA +
Preference number: 5 (lower is better)
Translates to: PRENRIAAPFFVLLK*EYFVETTPEAHSFT
Trigger: TGTGAAGGAATGAGCCTCGGGAGTTGTCTCAACAAAATACTCTCACTTGAGGAGAACGAAGAATGGAGCTGCTATGCGATTCTCCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS CCA 90 bp GAGCCTGTGCTTTTACCCTTAGTAGATCGCAGGTTTCCTAAGAAATaGGAAAGACCGGTGGCAGAAAGCTTAGGCCACAAAGACAAAGAC +
Preference number: 5 (lower is better)
Translates to: EPVLLPLVDRRFPKK*ERPVAESLGHKDKD
Trigger: GTCTTTGTCTTTGTGGCCTAAGCTTTCTGCCACCGGTCTTTCCCATTTCTTAGGAAACCTGCGATCTACTAAGGGTAAAAGCACAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS TCA 90 bp CTGAGCGATAGCATAAGAAGGCACAGCAAGATCCCCAGGTGCTACTaGCTCTTCTGGGGACAAAGAGGATGTGAAGAACTATATTCATGT +
Preference number: 5 (lower is better)
Translates to: LSDSIRRHSKIPRCY*LFWGQRGCEELYSC
Trigger: ACATGAATATAGTTCTTCACATCCTCTTTGTCCCCAGAAGAGTCAGTAGCACCTGGGGATCTTGCTGTGCCTTCTTATGCTATCGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS CCA 90 bp GAGAGTATTTTGTTGAGACAACTCCCGAGGCTCATTCCTTCACAGTaGATGCCAAATTCTATATCCTACCCAGACTCTGCTACACTGAGC +
Preference number: 5 (lower is better)
Translates to: ESILLRQLPRLIPSQ*MPNSISYPDSATLS
Trigger: GCTCAGTGTAGCAGAGTCTGGGTAGGATATAGAATTTGGCATCCACTGTGAAGGAATGAGCCTCGGGAGTTGTCTCAACAAAATACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS TCA 90 bp CATAGCAGCTCCATTCTTCGTTCTCCTCAAGTGAGAGTATTTTGTTaGGACAACTCCCGAGGCTCATTCCTTCACAGTGGATGCCAAATT +
Preference number: 5 (lower is better)
Translates to: HSSSILRSPQVRVFC*DNSRGSFLHSGCQI
Trigger: AATTTGGCATCCACTGTGAAGGAATGAGCCTCGGGAGTTGTCTCAACAAAATACTCTCACTTGAGGAGAACGAAGAATGGAGCTGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS GCA 90 bp AGCATGTGGCTTCTGGCTCAAGTCCACAGCCCTAACACTACAATCTaGTGCTTCTCTATAGGATATTTCTACCCAGCTCTCAGACATTTT +
Preference number: 5 (lower is better)
Translates to: SMWLLAQVHSPNTTI*CFSIGYFYPALRHF
Trigger: AAAATGTCTGAGAGCTGGGTAGAAATATCCTATAGAGAAGCAGCAGATTGTAGTGTTAGGGCTGTGGACTTGAGCCAGAAGCCACATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508736.1
ENST00000527253.2
CDS GCA 90 bp TCCTGCTTTGGTAACAATTTCATCTTCTTAAAGGCAAAGAAAGCCTaGACGGGCCAAGCTAGGGGGTTGATATCTCAGAGGGTTTCAATC +
Preference number: 5 (lower is better)
Translates to: SCFGNNFIFLKAKKA*TGQARGLISQRVSI
Trigger: GATTGAAACCCTCTGAGATATCAACCCCCTAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGAAGATGAAATTGTTACCAAAGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552301.1
CDS GCA 90 bp AGCGAGCTCTCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTaGTTTGGTAACAATTTCATCTTCTTAAAGGCAAAGAAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SELSGKHAECLTFFS*FGNNFIFLKAKKAC
Trigger: GCAGGCTTTCTTTGCCTTTAAGAAGATGAAATTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCATGCTTGCCAGAGAGCTCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552301.1
CDS-3UTR CAA 90 bp AAAAAGTGGACACAGACCAGACTAAGGAAGAAGTCTGAGGCAGACGGTGAGGGTTCAGGACTATTCGACTaGTGTCTTCTCTTCTTAGTT +
Preference number: 5 (lower is better)
Translates to: KKWTQTRLRKKSEADGEGSGLFD*CLLFLV
Trigger: AACTAAGAAGAGAAGACACAAGTCGAATAGTCCTGA...ACCCTCACCGTCTGCCTCAGACTTCTTCCTTAGTCTGGTCTGTGTCCACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS CCA 72 bp CAGGCTGGGCACCGTGCCTCCTCTGGGAGGGGAGTGTaGGTGGCGAGCACAGGGACAGCACAGGACACATCC +
Preference number: 6 (lower is better)
Translates to: QAGHRASSGRGV*VASTGTAQDTS
Trigger: GGATGTGTCCTGTGCTGTCCCTGTGCTCGCCACCCACACTCCCCTCCCAGAGGAGGCACGGTGCCCAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508736.1
ENST00000527253.2
CDS CCA 72 bp GAAGAGTTAGAGGTGACACCTCCCGGCGACCACAAGTaGCCCCAGCCGTCCAGGTGGGGTCCGGCTGACGGG +
Preference number: 6 (lower is better)
Translates to: EELEVTPPGDHK*PQPSRWGPADG
Trigger: CCCGTCAGCCGGACCCCACCTGGACGGCTGGGGCCACTTGTGGTCGCCGGGAGGTGTCACCTCTAACTCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551063.5
CDS CCA 72 bp GAATCGGGAACCGACATGCCAGAGCCTCCGAGCAGCTaGGCCGGCTCAGCCCACCCGCCAGTAAGAGCCGCT +
Preference number: 6 (lower is better)
Translates to: ESGTDMPEPPSS*AGSAHPPVRAA
Trigger: AGCGGCTCTTACTGGCGGGTGGGCTGAGCCGGCCCAGCTGCTCGGAGGCTCTGGCATGTCGGTTCCCGATTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551418.5
CDS CAA 72 bp GTCCAGGAAGGTCTGGAAGGCCTCCCGATTCTTGCGTaGTTGGCGTCGCTCCCGAAGCCGGGCCCGCTCCCG +
Preference number: 6 (lower is better)
Translates to: VQEGLEGLPILA*LASLPKPGPLP
Trigger: CGGGAGCGGGCCCGGCTTCGGGAGCGACGCCAACAACGCAAGAATCGGGAGGCCTTCCAGACCTTCCTGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 72 bp CAGGGCTGTGACGTGACTGGGGTGGGCCCTCAGTGGTaGAGCACCGCTGCCCTCAGGCTTGAGGGGTGCTTG +
Preference number: 6 (lower is better)
Translates to: QGCDVTGVGPQW*STAALRLEGCL
Trigger: CAAGCACCCCTCAAGCCTGAGGGCAGCGGTGCTTCACCACTGAGGGCCCACCCCAGTCACGTCACAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546626.1
CDS TCA 72 bp CCACAAGTGGCCCCAGCCGTCCAGGTGGGGTCCGGCTaGCGGGACCAAGTCGACACTACTCCTTCTCGCAGG +
Preference number: 6 (lower is better)
Translates to: PQVAPAVQVGSG*RDQVDTTPSRR
Trigger: CCTGCGAGAAGGAGTAGTGTCGACTTGGTCCCGTCAGCCGGACCCCACCTGGACGGCTGGGGCCACTTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547764.1
ENST00000551063.5
ENST00000552301.1
CDS GCA 72 bp GCTCGTCCAGGAAGGTCTGGAAGGCCTCCCGATTCTTaGGTTGTTGGCGTCGCTCCCGAAGCCGGGCCCGCT +
Preference number: 6 (lower is better)
Translates to: ARPGRSGRPPDS*VVGVAPEAGPA
Trigger: AGCGGGCCCGGCTTCGGGAGCGACGCCAACAACGCAAGAATCGGGAGGCCTTCCAGACCTTCCTGGACGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS GCA 72 bp GACTCACAGCTGGCGGTGTCCGCACCCGGAGCCGTCTaGCGAAGAAAGAGGAGGGGGAAGGGTTGGGGCCAA +
Preference number: 6 (lower is better)
Translates to: DSQLAVSAPGAV*RRKRRGKGWGQ
Trigger: TTGGCCCCAACCCTTCCCCCTCCTCTTTCTTCGGCAGACGGCTCCGGGTGCGGACACCGCCAGCTGTGAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS CCA 72 bp AGGAAGGTCTGGAAGGCCTCCCGATTCTTGCGTTGTTaGCGTCGCTCCCGAAGCCGGGCCCGCTCCCGTTCC +
Preference number: 6 (lower is better)
Translates to: RKVWKASRFLRC*RRSRSRARSRS
Trigger: GGAACGGGAGCGGGCCCGGCTTCGGGAGCGACGCCAACAACGCAAGAATCGGGAGGCCTTCCAGACCTTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS CCA 72 bp GACTCACGGGACTGCAGGGCAGAGCCTGCTACCTGCTaGCCCCTAGTGCTTACCGCTGCGGTGACAGGCACC +
Preference number: 6 (lower is better)
Translates to: DSRDCRAEPATC*PLVLTAAVTGT
Trigger: GGTGCCTGTCACCGCAGCGGTAAGCACTAGGGGCCAGCAGGTAGCAGGCTCTGCCCTGCAGTCCCGTGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548436.5
ENST00000551418.5
CDS CAA 72 bp CAGGAAGGTCTGGAAGGCCTCCCGATTCTTGCGTTGTaGGCGTCGCTCCCGAAGCCGGGCCCGCTCCCGTTC +
Preference number: 6 (lower is better)
Translates to: QEGLEGLPILAL*ASLPKPGPLPF
Trigger: GAACGGGAGCGGGCCCGGCTTCGGGAGCGACGCCAACAACGCAAGAATCGGGAGGCCTTCCAGACCTTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS CAA 72 bp AGCTCGTCCAGGAAGGTCTGGAAGGCCTCCCGATTCTaGCGTTGTTGGCGTCGCTCCCGAAGCCGGGCCCGC +
Preference number: 6 (lower is better)
Translates to: SSSRKVWKASRF*RCWRRSRSRAR
Trigger: GCGGGCCCGGCTTCGGGAGCGACGCCAACAACGCAAGAATCGGGAGGCCTTCCAGACCTTCCTGGACGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS CAA 90 bp ATGCAGCTCGTCCAGGAAGGTCTGGAAGGCCTCCCGATTCTTGCGTaGTTGGCGTCGCTCCCGAAGCCGGGCCCGCTCCCGTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: MQLVQEGLEGLPILA*LASLPKPGPLPFLL
Trigger: GAGGAGGAACGGGAGCGGGCCCGGCTTCGGGAGCGACGCCAACAACGCAAGAATCGGGAGGCCTTCCAGACCTTCCTGGACGAGCTGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS GCA 72 bp CAGCCTGCCTCAGCATGCTTCGAAAGGCAGCTTCCCTaGGCCGCATCCTGCGTGCCTCCTCCTTCTCCCGCT +
Preference number: 6 (lower is better)
Translates to: QPASACFERQLP*AASCVPPPSPA
Trigger: AGCGGGAGAAGGAGGAGGCACGCAGGATGCGGCGCAGGGAAGCTGCCTTTCGAAGCATGCTGAGGCAGGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548825.7
ENST00000549547.1
CDS CCA 72 bp CGCACCCGGAGCCGTCGCTGCGGTGACAGGCACCGCTaGCATCAGCATTCCTGGCATCATCGGAGGTACCAT +
Preference number: 6 (lower is better)
Translates to: RTRSRRCGDRHR*HQHSWHHRRYH
Trigger: ATGGTACCTCCGATGATGCCAGGAATGCTGATGCCAGCGGTGCCTGTCACCGCAGCGACGGCTCCGGGTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
ENST00000551111.1
CDS CCA 72 bp GAGAGCACTGCTGATCAGACTAGGCCCCACTCAGCCTaGCCTGGACACCGCCATGAGCACAGGGCAGGGCTG +
Preference number: 6 (lower is better)
Translates to: ESTADQTRPHSA*PGHRHEHRAGL
Trigger: CAGCCCTGCCCTGTGCTCATGGCGGTGTCCAGGCCAGGCTGAGTGGGGCCTAGTCTGATCAGCAGTGCTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546626.1
CDS GCA 72 bp AGAGCCTGCTACCTGCTGGCCCCTAGTGCTTACCGCTaGGGTGACAGGCACCGCTGGCATCAGCATTCCTGG +
Preference number: 6 (lower is better)
Translates to: RACYLLAPSAYR*GDRHRWHQHSW
Trigger: CCAGGAATGCTGATGCCAGCGGTGCCTGTCACCGCAGCGGTAAGCACTAGGGGCCAGCAGGTAGCAGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548436.5
ENST00000551418.5
CDS CCA 72 bp AGCACCCAGGCTTCCAAAGGGAACGGGCGCTGGGGCTaGGGGAAGGGCATGTCGCACACCAAATATCCCAGG +
Preference number: 6 (lower is better)
Translates to: STQASKGNGRWG*GKGMSHTKYPR
Trigger: CCTGGGATATTTGGTGTGCGACATGCCCTTCCCCCAGCCCCAGCGCCCGTTCCCTTTGGAAGCCTGGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS CCA 72 bp CAGACTCCTTGGCATCCCAACAGGCATGATCCAGGGTaGGCTCCAGTCCACGGTCCCCTCTCCCCTATGCCC +
Preference number: 6 (lower is better)
Translates to: QTPWHPNRHDPG*APVHGPLSPMP
Trigger: GGGCATAGGGGAGAGGGGACCGTGGACTGGAGCCCACCCTGGATCATGCCTGTTGGGATGCCAAGGAGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS CCA 72 bp CTGAGGAGCACCCAGGCTTCCAAAGGGAACGGGCGCTaGGGCTGGGGGAAGGGCATGTCGCACACCAAATAT +
Preference number: 6 (lower is better)
Translates to: LRSTQASKGNGR*GWGKGMSHTKY
Trigger: ATATTTGGTGTGCGACATGCCCTTCCCCCAGCCCCAGCGCCCGTTCCCTTTGGAAGCCTGGGTGCTCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS CAA 72 bp AGGAAGGGCCAGAAAGCCCAGCTCAGGACCTCTGCCTaGGACTTGAGCACGCTGGGCTTCTCCCACACGGAC +
Preference number: 6 (lower is better)
Translates to: RKGQKAQLRTSA*DLSTLGFSHTD
Trigger: GTCCGTGTGGGAGAAGCCCAGCGTGCTCAAGTCCAAGGCAGAGGTCCTGAGCTGGGCTTTCTGGCCCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551111.1
CDS CAA 90 bp GCAGCTGAAAGGAAGGGCCAGAAAGCCCAGCTCAGGACCTCTGCCTaGGACTTGAGCACGCTGGGCTTCTCCCACACGGACTGCTTGTCG +
Preference number: 6 (lower is better)
Translates to: AAERKGQKAQLRTSA*DLSTLGFSHTDCLS
Trigger: CGACAAGCAGTCCGTGTGGGAGAAGCCCAGCGTGCTCAAGTCCAAGGCAGAGGTCCTGAGCTGGGCTTTCTGGCCCTTCCTTTCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551111.1
CDS TCA 72 bp GGTTCTGGCTTTGATTCCTCCTCCTCCTGCTGTGGCTaGTGCTGTCCAGAACTGCTGGGGCCCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GSGFDSSSSCCG*CCPELLGPSSS
Trigger: GCTGGAGGAGGGCCCCAGCAGTTCTGGACAGCATCAGCCACAGCAGGAGGAGGAGGAATCAAAGCCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548436.5
ENST00000548825.7
CDS TCA 72 bp GGGGTCGGTGACCACCATCTTCATGGCCTGTTCCCATaGGGCATTGGAGGGGACAGCCTTGTCCCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: GVGDHHLHGLFP*GIGGDSLVPQQ
Trigger: CTGCTGAGGGACAAGGCTGTCCCCTCCAATGCCTCATGGGAACAGGCCATGAAGATGGTGGTCACCGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548436.5
ENST00000548825.7
CDS TCA 72 bp AGACCCGAGGCAGAGAACAGCTCATTGGGTCACTGGTaGTCATCCAGCTGCTGTAGGAGTGTCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: RPEAENSSLGHW*SSSCCRSVRRR
Trigger: GCGGCGGCGGACACTCCTACAGCAGCTGGATGATCACCAGTGACCCAATGAGCTGTTCTCTGCCTCGGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 72 bp CTCCCTCTGCCCAGGCCTACCTGTAACGGGGGTCGGTaGCCACCATCTTCATGGCCTGTTCCCATGAGGCAT +
Preference number: 6 (lower is better)
Translates to: LPLPRPTCNGGR*PPSSWPVPMRH
Trigger: ATGCCTCATGGGAACAGGCCATGAAGATGGTGGTCACCGACCCCCGTTACAGGTAGGCCTGGGCAGAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS GCA 72 bp TCTGTTCTGCCCGCCGGTAGCGGGTGGTGGAGGTCATaGGTTCATGCTGCTCCAGGAAATGCTGCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: SVLPAGSGWWRS*VHAAPGNAAGS
Trigger: AGACCCTGCAGCATTTCCTGGAGCAGCATGAACGCATGACCTCCACCACCCGCTACCGGCGGGCAGAACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS GCA 72 bp CACACACAAAACGCTCACGGACCTCTTCCCAGGCAGTaGCTAGCTCCAGAGCAGGCACAGCCTGCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: HTQNAHGPLPRQ*LAPEQAQPASA
Trigger: TGCTGAGGCAGGCTGTGCCTGCTCTGGAGCTAGGCACTGCCTGGGAAGAGGTCCGTGAGCGTTTTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
ENST00000549547.1
CDS GCA 72 bp GGACCCAATCTGCTCACCAAAGCAGGAGGCCACACTTaGCCATGTCTCCTAGTACCCAGCAGCCTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: GPNLLTKAGGHT*PCLLVPSSLPS
Trigger: GGAGGGCAGGCTGCTGGGTACTAGGAGACATGGGCAAGTGTGGCCTCCTGCTTTGGTGAGCAGATTGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547764.1
CDS CCA 72 bp TCCTGGTATCTGTGTGAGTGGTGGTGGCGCCCCCATTaGTGGAAGCATTGGGGGCAGGATGCCAGGTGGCAT +
Preference number: 6 (lower is better)
Translates to: SWYLCEWWWRPH*WKHWGQDARWH
Trigger: ATGCCACCTGGCATCCTGCCCCCAATGCTTCCACCAATGGGGGCGCCACCACCACTCACACAGATACCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548436.5
ENST00000548825.7
ENST00000551111.1
ENST00000551418.5
CDS CCA 72 bp AGCAGGAGCATCAGGAGAAGCTGCGGCAGTGGAATCTaGAAGACCTGGCCAGGGAGCAACAGCGGAGATGGG +
Preference number: 6 (lower is better)
Translates to: SRSIRRSCGSGI*KTWPGSNSGDG
Trigger: CCCATCTCCGCTGTTGCTCCCTGGCCAGGTCTTCCAGATTCCACTGCCGCAGCTTCTCCTGATGCTCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508736.1
ENST00000547764.1
CDS CCA 72 bp GCCCCTAGTGCTTACCGCTGCGGTGACAGGCACCGCTaGCATCAGCATTCCTGGCATCATCGGAGGTACCAT +
Preference number: 6 (lower is better)
Translates to: APSAYRCGDRHR*HQHSWHHRRYH
Trigger: ATGGTACCTCCGATGATGCCAGGAATGCTGATGCCAGCGGTGCCTGTCACCGCAGCGGTAAGCACTAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548436.5
ENST00000551418.5
CDS CAA 72 bp TGCTCCAGGAAATGCTGCAGGGTCTGCTTGGCCTCTTaGGCCCTTAGCCGGGCCTCCTCCTTCTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: CSRKCCRVCLAS*ALSRASSFSSF
Trigger: GAAGGAGGAGAAGGAGGAGGCCCGGCTAAGGGCCAAAGAGGCCAAGCAGACCCTGCAGCATTTCCTGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS CAA 72 bp CGTTCATGCTGCTCCAGGAAATGCTGCAGGGTCTGCTaGGCCTCTTTGGCCCTTAGCCGGGCCTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: RSCCSRKCCRVC*ASLALSRASSF
Trigger: GAAGGAGGAGGCCCGGCTAAGGGCCAAAGAGGCCAAGCAGACCCTGCAGCATTTCCTGGAGCAGCATGAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS CAA 90 bp GAGGTCATGCGTTCATGCTGCTCCAGGAAATGCTGCAGGGTCTGCTaGGCCTCTTTGGCCCTTAGCCGGGCCTCCTCCTTCTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: EVMRSCCSRKCCRVC*ASLALSRASSFSSF
Trigger: GAAGGAGGAGAAGGAGGAGGCCCGGCTAAGGGCCAAAGAGGCCAAGCAGACCCTGCAGCATTTCCTGGAGCAGCATGAACGCATGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS CAA 90 bp TTCTCCCGCTCCCTCTCCCGTGCCTCTGCTTTCTCCAGCAGACTATaGAAGGTCAGCTTGATGTTGCCTGCGTCCAGTGCGGCAGCCCTC +
Preference number: 6 (lower is better)
Translates to: FSRSLSRASAFSSRL*KVSLMLPASSAAAL
Trigger: GAGGGCTGCCGCACTGGACGCAGGCAACATCAAGCTGACCTTCAATAGTCTGCTGGAGAAAGCAGAGGCACGGGAGAGGGAGCGGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548399.1
ENST00000548825.7
ENST00000549547.1
CDS CAA 90 bp GAAAGGAAGGGCCAGAAAGCCCAGCTCAGGACCTCTGCCTTGGACTaGAGCACGCTGGGCTTCTCCCACACGGACTGCTTGTCGTCAGCA +
Preference number: 6 (lower is better)
Translates to: ERKGQKAQLRTSALD*STLGFSHTDCLSSA
Trigger: TGCTGACGACAAGCAGTCCGTGTGGGAGAAGCCCAGCGTGCTCAAGTCCAAGGCAGAGGTCCTGAGCTGGGCTTTCTGGCCCTTCCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551111.1
CDS CAA 90 bp CATAAGGTCCTGTGCAACCCTCAGACTCCTATACCTCGTGGGAATTaGGAAGTCGAAATCCAGTCCGCGGTCCCGCCCCTCCCCGGGTCG +
Preference number: 6 (lower is better)
Translates to: HKVLCNPQTPIPRGN*EVEIQSAVPPLPGS
Trigger: CGACCCGGGGAGGGGCGGGACCGCGGACTGGATTTCGACTTCCAAATTCCCACGAGGTATAGGAGTCTGAGGGTTGCACAGGACCTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000547764.1
ENST00000551063.5
ENST00000552301.1
CDS TCA 72 bp GACCAGAATCGGGAACCGACTGAGCCGGGACTCGCGTaGTGCCGTGCTAGGTTCCTGAGAGCCAAAGAACTC +
Preference number: 6 (lower is better)
Translates to: DQNREPTEPGLA*CRARFLRAKEL
Trigger: GAGTTCTTTGGCTCTCAGGAACCTAGCACGGCATCACGCGAGTCCCGGCTCAGTCGGTTCCCGATTCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551063.5
CDS GCA 72 bp CGGAAGAGCCGGATCCGCTCCGACTCCAGGGTGATCTaGTCAAAGGCTGAGTCACACACAAAACGCTCACGG +
Preference number: 6 (lower is better)
Translates to: RKSRIRSDSRVI*SKAESHTKRSR
Trigger: CCGTGAGCGTTTTGTGTGTGACTCAGCCTTTGAGCAGATCACCCTGGAGTCGGAGCGGATCCGGCTCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548825.7
ENST00000549547.1
CDS GCA 72 bp GTCATAGTCCTGCATTCCAAGTCAGACTCACGGGACTaGAGGGCAGAGCCTGCTACCTGCTGGCCCCTAGTG +
Preference number: 6 (lower is better)
Translates to: VIVLHSKSDSRD*RAEPATCWPLV
Trigger: CACTAGGGGCCAGCAGGTAGCAGGCTCTGCCCTGCAGTCCCGTGAGTCTGACTTGGAATGCAGGACTATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548436.5
ENST00000551418.5
CDS CCA 72 bp AATCTGGAAGACCTGGCCAGGGAGCAACAGCGGAGATaGGTCCAGCTAGAAAAGGAGCAGGAGAGCCCACGG +
Preference number: 6 (lower is better)
Translates to: NLEDLAREQQRR*VQLEKEQESPR
Trigger: CCGTGGGCTCTCCTGCTCCTTTTCTAGCTGGACCCATCTCCGCTGTTGCTCCCTGGCCAGGTCTTCCAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508736.1
ENST00000547764.1
CDS CCA 72 bp GGAGCAGCTGCAAGTGGATGGGATAGGAGCCATCAGTaGGATGGGCAAGTTCTCCAGCCAGTCAGGGGAGCT +
Preference number: 6 (lower is better)
Translates to: GAAASGWDRSHQ*DGQVLQPVRGA
Trigger: AGCTCCCCTGACTGGCTGGAGAACTTGCCCATCCCACTGATGGCTCCTATCCCATCCACTTGCAGCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551111.1
CDS CCA 72 bp TGCAGCCCTCCCAATCCAGTCTACCCTCAAAGGAGCTaGGGCTTGTGGAGGGCATCCTCTCAGTCTGGGACA +
Preference number: 6 (lower is better)
Translates to: CSPPNPVYPQRS*GLWRASSQSGT
Trigger: TGTCCCAGACTGAGAGGATGCCCTCCACAAGCCCCAGCTCCTTTGAGGGTAGACTGGATTGGGAGGGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS CAA 72 bp AAGTCCAGAGGGGTGGAGCCCGGCTGGCCCAGCATGTaGGCAAAGCGGACATCAGTGCTGACTGCTGGATAT +
Preference number: 6 (lower is better)
Translates to: KSRGVEPGWPSM*AKRTSVLTAGY
Trigger: ATATCCAGCAGTCAGCACTGATGTCCGCTTTGCCAACATGCTGGGCCAGCCGGGCTCCACCCCTCTGGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS CAA 90 bp GATGTGGAGAGGAGGATCTTCACACCCACCAGTCGATGGAGGGACTaGGAGAAGGCAGAGCTATCATTAGTGCCTGCCCCAAGCCGGACC +
Preference number: 6 (lower is better)
Translates to: DVERRIFTPTSRWRD*EKAELSLVPAPSRT
Trigger: GGTCCGGCTTGGGGCAGGCACTAATGATAGCTCTGCCTTCTCCAAGTCCCTCCATCGACTGGTGGGTGTGAAGATCCTCCTCTCCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508736.1
ENST00000547764.1
CDS CAA 90 bp AGGTGCAGCCCTCCCAATCCAGTCTACCCTCAAAGGAGCTGGGGCTaGTGGAGGGCATCCTCTCAGTCTGGGACAACAGTTCTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: RCSPPNPVYPQRSWG*WRASSQSGTTVLQL
Trigger: AAGCTGGAGAACTGTTGTCCCAGACTGAGAGGATGCCCTCCACAAGCCCCAGCTCCTTTGAGGGTAGACTGGATTGGGAGGGCTGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS TCA 72 bp GGGGGCATCCAAGGTCACACAGAGTCGTTAGTTTGTTaGTGGCCTGGGCTGGGAGCCCCTTTCTTCAGAGGC +
Preference number: 6 (lower is better)
Translates to: GGIQGHTESLVC*WPGLGAPFFRG
Trigger: GCCTCTGAAGAAAGGGGCTCCCAGCCCAGGCCATCAACAAACTAACGACTCTGTGTGACCTTGGATGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS TCA 72 bp CTGCGTCCAGTGCGGCAGCCCTCTTGTCAAAGCTTATaGCGTGGGCGAAGTCCTCAAAGGCCGTGTTCACCT +
Preference number: 6 (lower is better)
Translates to: LRPVRQPSCQSL*RGRSPQRPCSP
Trigger: AGGTGAACACGGCCTTTGAGGACTTCGCCCACGTCATAAGCTTTGACAAGAGGGCTGCCGCACTGGACGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548399.1
ENST00000548825.7
ENST00000549547.1
CDS TCA 72 bp ACTCCCGGAAGAGCCGGATCCGCTCCGACTCCAGGGTaGTCTGCTCAAAGGCTGAGTCACACACAAAACGCT +
Preference number: 6 (lower is better)
Translates to: TPGRAGSAPTPG*SAQRLSHTQNA
Trigger: AGCGTTTTGTGTGTGACTCAGCCTTTGAGCAGATCACCCTGGAGTCGGAGCGGATCCGGCTCTTCCGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548825.7
ENST00000549547.1
CDS TCA 72 bp TGTGGGGAGTGCTGCCGGGGACCTGGGTGGATGCGATaGGAAGAGGGAAAGAATGGAGGTCATAGTCCTGCA +
Preference number: 6 (lower is better)
Translates to: CGECCRGPGWMR*EEGKNGGHSPA
Trigger: TGCAGGACTATGACCTCCATTCTTTCCCTCTTCTCATCGCATCCACCCAGGTCCCCGGCAGCACTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS TCA 72 bp ATCAATATCCCAGACTCCTTGGCATCCCAACAGGCATaGTCCAGGGTGGGCTCCAGTCCACGGTCCCCTCTC +
Preference number: 6 (lower is better)
Translates to: INIPDSLASQQA*SRVGSSPRSPL
Trigger: GAGAGGGGACCGTGGACTGGAGCCCACCCTGGATCATGCCTGTTGGGATGCCAAGGAGTCTGGGATATTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS GCA 72 bp TCCCATGGCCATGATACGGGACAGTGGTGCTATAGCTaGAGGGCACCAGCCACTTTCCACCATGACTGTGCG +
Preference number: 6 (lower is better)
Translates to: SHGHDTGQWCYS*RAPATFHHDCA
Trigger: CGCACAGTCATGGTGGAAAGTGGCTGGTGCCCTGCAGCTATAGCACCACTGTCCCGTATCATGGCCATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS GCA 72 bp ACAGGAGCCTGGAGACCAAATACAGGCACCTGCAAATaGAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: TGAWRPNTGTCK*RRPKSSAARGC
Trigger: GCAGCCTCTGGCTGCTGAGCTCTTTGGTCGCCTGCATTTGCAGGTGCCTGTATTTGGTCTCCAGGCTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS GCA 72 bp CTCAGAGCCCTGGGCAGATCAGCAGATACATGTCAGTaGAGAGGTTCTCTGCCCTCCAGAAGCCCTCGTCTG +
Preference number: 6 (lower is better)
Translates to: LRALGRSADTCQ*RGSLPSRSPRL
Trigger: CAGACGAGGGCTTCTGGAGGGCAGAGAACCTCTGCACTGACATGTATCTGCTGATCTGCCCAGGGCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS CCA 72 bp CGCTGCGGTGACAGGCACCGCTGGCATCAGCATTCCTaGCATCATCGGAGGTACCATTCCTGGTATCTGTGT +
Preference number: 6 (lower is better)
Translates to: RCGDRHRWHQHS*HHRRYHSWYLC
Trigger: ACACAGATACCAGGAATGGTACCTCCGATGATGCCAGGAATGCTGATGCCAGCGGTGCCTGTCACCGCAGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548436.5
ENST00000548825.7
ENST00000551111.1
ENST00000551418.5
CDS CCA 72 bp ACACTACTCATCCCATCCAGGATGCTCTTTAGGGCCTaGATATTGCGGCGCCGGAGCTGCTTGGCCTGTTCC +
Preference number: 6 (lower is better)
Translates to: TLLIPSRMLFRA*ILRRRSCLACS
Trigger: GGAACAGGCCAAGCAGCTCCGGCGCCGCAATATCCAGGCCCTAAAGAGCATCCTGGATGGGATGAGTAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS CCA 72 bp TCCAGTGCGGCAGCCCTCTTGTCAAAGCTTATGACGTaGGCGAAGTCCTCAAAGGCCGTGTTCACCTCCACG +
Preference number: 6 (lower is better)
Translates to: SSAAALLSKLMT*AKSSKAVFTST
Trigger: CGTGGAGGTGAACACGGCCTTTGAGGACTTCGCCCACGTCATAAGCTTTGACAAGAGGGCTGCCGCACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380281.5
ENST00000548399.1
ENST00000548825.7
ENST00000549547.1
CDS CCA 72 bp ACTTCCCCCAAGTCCCATGGCCATGATACGGGACAGTaGTGCTATAGCTGCAGGGCACCAGCCACTTTCCAC +
Preference number: 6 (lower is better)
Translates to: TSPKSHGHDTGQ*CYSCRAPATFH
Trigger: GTGGAAAGTGGCTGGTGCCCTGCAGCTATAGCACCACTGTCCCGTATCATGGCCATGGGACTTGGGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS CAA 72 bp CTACAGGTCAGGCAGAAGACCTGGCTGAGGTTTCTGTaGACTCCCCAGGTCCCTCTGAGAGAGAGACCCTCC +
Preference number: 6 (lower is better)
Translates to: LQVRQKTWLRFL*TPQVPLRERPS
Trigger: GGAGGGTCTCTCTCTCAGAGGGACCTGGGGAGTCAACAGAAACCTCAGCCAGGTCTTCTGCCTGACCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS CAA 90 bp TTGACACTACTCATCCCATCCAGGATGCTCTTTAGGGCCTGGATATaGCGGCGCCGGAGCTGCTTGGCCTGTTCCTTCTCCTTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LTLLIPSRMLFRAWI*RRRSCLACSFSFLA
Trigger: GGCCAAGAAGGAGAAGGAACAGGCCAAGCAGCTCCGGCGCCGCAATATCCAGGCCCTAAAGAGCATCCTGGATGGGATGAGTAGTGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 72 bp CACCTCAGGAGACAAGCTCTTGCAAATGCAGGAAGGTaGAGCAGGGAGTCCCCAAGTGGTCTGAGGAGCACC +
Preference number: 6 (lower is better)
Translates to: HLRRQALANAGR*SRESPSGLRST
Trigger: GGTGCTCCTCAGACCACTTGGGGACTCCCTGCTTCACCTTCCTGCATTTGCAAGAGCTTGTCTCCTGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS TCA 72 bp GATCCGCTCCGACTCCAGGGTGATCTGCTCAAAGGCTaGGTCACACACAAAACGCTCACGGACCTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: DPLRLQGDLLKG*VTHKTLTDLFP
Trigger: TGGGAAGAGGTCCGTGAGCGTTTTGTGTGTGACTCAGCCTTTGAGCAGATCACCCTGGAGTCGGAGCGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
ENST00000549547.1
CDS TCA 72 bp CCGCCTCTCCAGCTCACCCTCACTCAGCTCACTTTCTaGCGTGTCCCAGCCTGTCTTCTCCTTCTTGATTCC +
Preference number: 6 (lower is better)
Translates to: PPLQLTLTQLTF*RVPACLLLLDS
Trigger: GGAATCAAGAAGGAGAAGACAGGCTGGGACACGTCAGAAAGTGAGCTGAGTGAGGGTGAGCTGGAGAGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 72 bp CCAGAGGCTGCACTTCCAGCAGTTCATGGAGGTCCTTaGGAGCAGGAGGGATGCTCTGCTGAAGCAGGTAGA +
Preference number: 6 (lower is better)
Translates to: PEAALPAVHGGP*EQEGCSAEAGR
Trigger: TCTACCTGCTTCAGCAGAGCATCCCTCCTGCTCTCAAGGACCTCCATGAACTGCTGGAAGTGCAGCCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS TCA 72 bp GCACAGGGACAGCACAGGACACATCCCCTTCTCCAGTaGAGCATTCCACCACTCGTGTCACAGCACATCACC +
Preference number: 6 (lower is better)
Translates to: AQGQHRTHPLLQ*SIPPLVSQHIT
Trigger: GGTGATGTGCTGTGACACGAGTGGTGGAATGCTTCACTGGAGAAGGGGATGTGTCCTGTGCTGTCCCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508736.1
ENST00000527253.2
CDS TCA 72 bp CTGAGCCGGGACTCGCGTGATGCCGTGCTAGGTTCCTaGGAGCCAAAGAACTCCGGAGAGGTAGAAAAACTC +
Preference number: 6 (lower is better)
Translates to: LSRDSRDAVLGS*EPKNSGEVEKL
Trigger: GAGTTTTTCTACCTCTCCGGAGTTCTTTGGCTCTCAGGAACCTAGCACGGCATCACGCGAGTCCCGGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551063.5
CDS GCA 72 bp GGATATAGCTCCATCCAGGTGGACATAGAGTGCAGCTaGCCTGTCTCATGCAGCTCGTCCAGGAAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: GYSSIQVDIECS*PVSCSSSRKVW
Trigger: CCAGACCTTCCTGGACGAGCTGCATGAGACAGGGCAGCTGCACTCTATGTCCACCTGGATGGAGCTATATCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS GCA 72 bp AGTGGGAACGCTTGTGATGGTGCTTCTTGCCTTTCCTaGCATGCTTTCGGCCTTTGGTGTGGAGGTGCTGGC +
Preference number: 6 (lower is better)
Translates to: SGNACDGASCLS*HAFGLWCGGAG
Trigger: GCCAGCACCTCCACACCAAAGGCCGAAAGCATGGCAGGAAAGGCAAGAAGCACCATCACAAGCGTTCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548825.7
ENST00000551269.1
CDS GCA 72 bp CCTTTCCTGCCATGCTTTCGGCCTTTGGTGTGGAGGTaGTGGCATTCAGTCTCCAGCACCTGTAGGAACTCC +
Preference number: 6 (lower is better)
Translates to: PFLPCFRPLVWR*WHSVSSTCRNS
Trigger: GGAGTTCCTACAGGTGCTGGAGACTGAATGCCAGCACCTCCACACCAAAGGCCGAAAGCATGGCAGGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546626.1
ENST00000548825.7
ENST00000549547.1
ENST00000551269.1
CDS CCA 72 bp TGGCCTCACACAGACCCGAGGCAGAGAACAGCTCATTaGGTCACTGGTGATCATCCAGCTGCTGTAGGAGTG +
Preference number: 6 (lower is better)
Translates to: WPHTDPRQRTAH*VTGDHPAAVGV
Trigger: CACTCCTACAGCAGCTGGATGATCACCAGTGACCCAATGAGCTGTTCTCTGCCTCGGGTCTGTGTGAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS CCA 72 bp TCCAGGGACATTGGGACAGGAGCAGCTGCAAGTGGATaGGATAGGAGCCATCAGTGGGATGGGCAAGTTCTC +
Preference number: 6 (lower is better)
Translates to: SRDIGTGAAASG*DRSHQWDGQVL
Trigger: GAGAACTTGCCCATCCCACTGATGGCTCCTATCCCATCCACTTGCAGCTGCTCCTGTCCCAATGTCCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551111.1
CDS CCA 72 bp GGTGGGGGCAGCTCCTCTTCTTCTGACTCAGAGCCCTaGGCAGATCAGCAGATACATGTCAGTGCAGAGGTT +
Preference number: 6 (lower is better)
Translates to: GGGSSSSSDSEP*ADQQIHVSAEV
Trigger: AACCTCTGCACTGACATGTATCTGCTGATCTGCCCAGGGCTCTGAGTCAGAAGAAGAGGAGCTGCCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS CAA 72 bp AGGGGGCATCCAAGGTCACACAGAGTCGTTAGTTTGTaGATGGCCTGGGCTGGGAGCCCCTTTCTTCAGAGG +
Preference number: 6 (lower is better)
Translates to: RGHPRSHRVVSL*MAWAGSPFLQR
Trigger: CCTCTGAAGAAAGGGGCTCCCAGCCCAGGCCATCAACAAACTAACGACTCTGTGTGACCTTGGATGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS CAA 72 bp TGGAGGGGGCATCCAAGGTCACACAGAGTCGTTAGTTaGTTGATGGCCTGGGCTGGGAGCCCCTTTCTTCAG +
Preference number: 6 (lower is better)
Translates to: WRGHPRSHRVVS*LMAWAGSPFLQ
Trigger: CTGAAGAAAGGGGCTCCCAGCCCAGGCCATCAACAAACTAACGACTCTGTGTGACCTTGGATGCCCCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS CAA 72 bp GCCTCTGCTTTCTCCAGCAGACTATTGAAGGTCAGCTaGATGTTGCCTGCGTCCAGTGCGGCAGCCCTCTTG +
Preference number: 6 (lower is better)
Translates to: ASAFSSRLLKVS*MLPASSAAALL
Trigger: CAAGAGGGCTGCCGCACTGGACGCAGGCAACATCAAGCTGACCTTCAATAGTCTGCTGGAGAAAGCAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548399.1
ENST00000548825.7
ENST00000549547.1
CDS CAA 72 bp TCCCTCTCCCGTGCCTCTGCTTTCTCCAGCAGACTATaGAAGGTCAGCTTGATGTTGCCTGCGTCCAGTGCG +
Preference number: 6 (lower is better)
Translates to: SLSRASAFSSRL*KVSLMLPASSA
Trigger: CGCACTGGACGCAGGCAACATCAAGCTGACCTTCAATAGTCTGCTGGAGAAAGCAGAGGCACGGGAGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548399.1
ENST00000548825.7
ENST00000549547.1
CDS CAA 72 bp CCTCCCAATCCAGTCTACCCTCAAAGGAGCTGGGGCTaGTGGAGGGCATCCTCTCAGTCTGGGACAACAGTT +
Preference number: 6 (lower is better)
Translates to: PPNPVYPQRSWG*WRASSQSGTTV
Trigger: AACTGTTGTCCCAGACTGAGAGGATGCCCTCCACAAGCCCCAGCTCCTTTGAGGGTAGACTGGATTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS CAA 90 bp TTGAAGGTCAGCTTGATGTTGCCTGCGTCCAGTGCGGCAGCCCTCTaGTCAAAGCTTATGACGTGGGCGAAGTCCTCAAAGGCCGTGTTC +
Preference number: 6 (lower is better)
Translates to: LKVSLMLPASSAAAL*SKLMTWAKSSKAVF
Trigger: GAACACGGCCTTTGAGGACTTCGCCCACGTCATAAGCTTTGACAAGAGGGCTGCCGCACTGGACGCAGGCAACATCAAGCTGACCTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548399.1
ENST00000548825.7
ENST00000549547.1
CDS CAA 90 bp CTCTCCCGTGCCTCTGCTTTCTCCAGCAGACTATTGAAGGTCAGCTaGATGTTGCCTGCGTCCAGTGCGGCAGCCCTCTTGTCAAAGCTT +
Preference number: 6 (lower is better)
Translates to: LSRASAFSSRLLKVS*MLPASSAAALLSKL
Trigger: AAGCTTTGACAAGAGGGCTGCCGCACTGGACGCAGGCAACATCAAGCTGACCTTCAATAGTCTGCTGGAGAAAGCAGAGGCACGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548399.1
ENST00000548825.7
ENST00000549547.1
CDS CAA 90 bp CTCAGAATGCTACAGGTCAGGCAGAAGACCTGGCTGAGGTTTCTGTaGACTCCCCAGGTCCCTCTGAGAGAGAGACCCTCCCAAGGAAAG +
Preference number: 6 (lower is better)
Translates to: LRMLQVRQKTWLRFL*TPQVPLRERPSQGK
Trigger: CTTTCCTTGGGAGGGTCTCTCTCTCAGAGGGACCTGGGGAGTCAACAGAAACCTCAGCCAGGTCTTCTGCCTGACCTGTAGCATTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS CAA 90 bp GTGATCTGCTCAAAGGCTGAGTCACACACAAAACGCTCACGGACCTaGAACGAGGAGAGCACTGCTGATCAGACTAGGCCCCACTCAGCC +
Preference number: 6 (lower is better)
Translates to: VICSKAESHTKRSRT*NEESTADQTRPHSA
Trigger: GGCTGAGTGGGGCCTAGTCTGATCAGCAGTGCTCTCCTCGTTCAAGGTCCGTGAGCGTTTTGTGTGTGACTCAGCCTTTGAGCAGATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546626.1
CDS TCA 72 bp CATGGAATCGTGCCTTCAACTCCTCCACATAGAACTTaGATAAGTCCAGAGGGGTGGAGCCCGGCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: HGIVPSTPPHRT*ISPEGWSPAGP
Trigger: TGGGCCAGCCGGGCTCCACCCCTCTGGACTTATTCAAGTTCTATGTGGAGGAGTTGAAGGCACGATTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS TCA 72 bp CAAAGGCTGAGTCACACACAAAACGCTCACGGACCTTaGACGAGGAGAGCACTGCTGATCAGACTAGGCCCC +
Preference number: 6 (lower is better)
Translates to: QRLSHTQNAHGP*TRRALLIRLGP
Trigger: GGGGCCTAGTCTGATCAGCAGTGCTCTCCTCGTTCAAGGTCCGTGAGCGTTTTGTGTGTGACTCAGCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546626.1
CDS TCA 72 bp GATCCGCTCCGACTCCAGGGTGATCTGCTCAAAGGCTaGGTCACACACAAAACGCTCACGGACCTTGAACGA +
Preference number: 6 (lower is better)
Translates to: DPLRLQGDLLKG*VTHKTLTDLER
Trigger: TCGTTCAAGGTCCGTGAGCGTTTTGTGTGTGACTCAGCCTTTGAGCAGATCACCCTGGAGTCGGAGCGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546626.1
CDS GCA 72 bp ACACGGACTGCTTGTCGTCAGCATTGTAGTAGTAGATaGGCCCATCTGGGGCCACATGCTCACTCCATAGGG +
Preference number: 6 (lower is better)
Translates to: TRTACRQHCSSR*AHLGPHAHSIG
Trigger: CCCTATGGAGTGAGCATGTGGCCCCAGATGGGCGCATCTACTACTACAATGCTGACGACAAGCAGTCCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548436.5
ENST00000548825.7
ENST00000551111.1
ENST00000551320.1
CDS GCA 72 bp ACTGCTGGATATAGCTCCATCCAGGTGGACATAGAGTaGAGCTGCCCTGTCTCATGCAGCTCGTCCAGGAAG +
Preference number: 6 (lower is better)
Translates to: TAGYSSIQVDIE*SCPVSCSSSRK
Trigger: CTTCCTGGACGAGCTGCATGAGACAGGGCAGCTGCACTCTATGTCCACCTGGATGGAGCTATATCCAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS GCA 72 bp CTGAGGGTGAGTGGGAACGCTTGTGATGGTGCTTCTTaGCTTTCCTGCCATGCTTTCGGCCTTTGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: LRVSGNACDGAS*LSCHAFGLWCG
Trigger: TCCACACCAAAGGCCGAAAGCATGGCAGGAAAGGCAAGAAGCACCATCACAAGCGTTCCCACTCACCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548825.7
ENST00000551269.1
CDS GCA 72 bp AAATGCAGGCGACCAAAGAGCTCAGCAGCCAGAGGCTaGACTTCCAGCAGTTCATGGAGGTCCTTGAGAGCA +
Preference number: 6 (lower is better)
Translates to: KCRRPKSSAARG*TSSSSWRSLRA
Trigger: TGCTCTCAAGGACCTCCATGAACTGCTGGAAGTGCAGCCTCTGGCTGCTGAGCTCTTTGGTCGCCTGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS GCA 72 bp AGGAGAACAGGAGCCTGGAGACCAAATACAGGCACCTaGAAATGCAGGCGACCAAAGAGCTCAGCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: RRTGAWRPNTGT*KCRRPKSSAAR
Trigger: TCTGGCTGCTGAGCTCTTTGGTCGCCTGCATTTGCAGGTGCCTGTATTTGGTCTCCAGGCTCCTGTTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS CCA 72 bp TCCAGTGCGGCAGCCCTCTTGTCAAAGCTTATGACGTaGGCGAAGTCCTCAAAGGCCGTGTTCACCTTAAGG +
Preference number: 6 (lower is better)
Translates to: SSAAALLSKLMT*AKSSKAVFTLR
Trigger: CCTTAAGGTGAACACGGCCTTTGAGGACTTCGCCCACGTCATAAGCTTTGACAAGAGGGCTGCCGCACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261897.5
CDS CCA 72 bp TTCTTGCCTTTCCTGCCATGCTTTCGGCCTTTGGTGTaGAGGTGCTGGCATTCAGTCTGCTCCAGCACCTGT +
Preference number: 6 (lower is better)
Translates to: FLPFLPCFRPLV*RCWHSVCSSTC
Trigger: ACAGGTGCTGGAGCAGACTGAATGCCAGCACCTCCACACCAAAGGCCGAAAGCATGGCAGGAAAGGCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261897.5
ENST00000380281.5
CDS CCA 72 bp AGAAGGCTCAGAATGCTACAGGTCAGGCAGAAGACCTaGCTGAGGTTTCTGTTGACTCCCCAGGTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: RRLRMLQVRQKT*LRFLLTPQVPL
Trigger: CAGAGGGACCTGGGGAGTCAACAGAAACCTCAGCCAGGTCTTCTGCCTGACCTGTAGCATTCTGAGCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS CCA 72 bp AATAGTCCCCTGGTCCCATCAATATCCCAGACTCCTTaGCATCCCAACAGGCATGATCCAGGGTGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: NSPLVPSISQTP*HPNRHDPGWAP
Trigger: TGGAGCCCACCCTGGATCATGCCTGTTGGGATGCCAAGGAGTCTGGGATATTGATGGGACCAGGGGACTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS CCA 72 bp TTCTTGCCTTTCCTGCCATGCTTTCGGCCTTTGGTGTaGAGGTGCTGGCATTCAGTCTCCAGCACCTGTAGG +
Preference number: 6 (lower is better)
Translates to: FLPFLPCFRPLV*RCWHSVSSTCR
Trigger: CCTACAGGTGCTGGAGACTGAATGCCAGCACCTCCACACCAAAGGCCGAAAGCATGGCAGGAAAGGCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546626.1
ENST00000548825.7
ENST00000551269.1
CDS CAA 72 bp AGCTTGATGTTGCCTGCGTCCAGTGCGGCAGCCCTCTaGTCAAAGCTTATGACGTGGGCGAAGTCCTCAAAG +
Preference number: 6 (lower is better)
Translates to: SLMLPASSAAAL*SKLMTWAKSSK
Trigger: CTTTGAGGACTTCGCCCACGTCATAAGCTTTGACAAGAGGGCTGCCGCACTGGACGCAGGCAACATCAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548399.1
ENST00000548825.7
ENST00000549547.1
CDS CAA 72 bp AGGAGGATCTTCACACCCACCAGTCGATGGAGGGACTaGGAGAAGGCAGAGCTATCATTAGTGCCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: RRIFTPTSRWRD*EKAELSLVPAP
Trigger: TGGGGCAGGCACTAATGATAGCTCTGCCTTCTCCAAGTCCCTCCATCGACTGGTGGGTGTGAAGATCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508736.1
ENST00000547764.1
CDS CAA 72 bp CACCTGGCCTGGTTCAAACTGGGGAAGGTGGACTTCTaGAGATCCTATGGAGGCATTTCCAGGGAGGGTGAG +
Preference number: 6 (lower is better)
Translates to: HLAWFKLGKVDF*RSYGGISREGE
Trigger: CTCACCCTCCCTGGAAATGCCTCCATAGGATCTCAAGAAGTCCACCTTCCCCAGTTTGAACCAGGCCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551111.1
CDS CAA 90 bp CGTGCCTCTGCTTTCTCCAGCAGACTATTGAAGGTCAGCTTGATGTaGCCTGCGTCCAGTGCGGCAGCCCTCTTGTCAAAGCTTATGACG +
Preference number: 6 (lower is better)
Translates to: RASAFSSRLLKVSLM*PASSAAALLSKLMT
Trigger: CGTCATAAGCTTTGACAAGAGGGCTGCCGCACTGGACGCAGGCAACATCAAGCTGACCTTCAATAGTCTGCTGGAGAAAGCAGAGGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548399.1
ENST00000548825.7
ENST00000549547.1
CDS GCA 72 bp GCAGATCAGCAGATACATGTCAGTGCAGAGGTTCTCTaGCCTCCAGAAGCCCTCGTCTGGGAATTCGAGAGA +
Preference number: 6 (lower is better)
Translates to: ADQQIHVSAEVL*PPEALVWEFER
Trigger: TCTCTCGAATTCCCAGACGAGGGCTTCTGGAGGGCAGAGAACCTCTGCACTGACATGTATCTGCTGATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS GCA 72 bp GGACAACAGTTCTCCAGCTTCTACGCTCACAGCAACTaGTTACCTGCTCCAAGAAGATGGGAGGAAGGGGAG +
Preference number: 6 (lower is better)
Translates to: GQQFSSFYAHSN*LPAPRRWEEGE
Trigger: CTCCCCTTCCTCCCATCTTCTTGGAGCAGGTAAGCAGTTGCTGTGAGCGTAGAAGCTGGAGAACTGTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS GCA 72 bp TGGGCAGGTAGAGGAAGTTCTTTCTACTTCCACAGGTaGAGCCCTCCCAATCCAGTCTACCCTCAAAGGAGC +
Preference number: 6 (lower is better)
Translates to: WAGRGSSFYFHR*SPPNPVYPQRS
Trigger: GCTCCTTTGAGGGTAGACTGGATTGGGAGGGCTGCACCTGTGGAAGTAGAAAGAACTTCCTCTACCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS CAA 72 bp TTTGCCTGTGTCCGACTTGTACTCTTTCCAGGGACATaGGGACAGGAGCAGCTCTGCCTTGGACTTGAGCAC +
Preference number: 6 (lower is better)
Translates to: FACVRLVLFPGT*GQEQLCLGLEH
Trigger: GTGCTCAAGTCCAAGGCAGAGCTGCTCCTGTCCCAATGTCCCTGGAAAGAGTACAAGTCGGACACAGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548436.5
ENST00000548825.7
ENST00000551320.1
CDS CAA 72 bp GCTTTCTCCAGCAGACTATTGAAGGTCAGCTTGATGTaGCCTGCGTCCAGTGCGGCAGCCCTCTTGTCAAAG +
Preference number: 6 (lower is better)
Translates to: AFSSRLLKVSLM*PASSAAALLSK
Trigger: CTTTGACAAGAGGGCTGCCGCACTGGACGCAGGCAACATCAAGCTGACCTTCAATAGTCTGCTGGAGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548399.1
ENST00000548825.7
ENST00000549547.1
CDS CAA 72 bp TCAAAGGCTGAGTCACACACAAAACGCTCACGGACCTaGAACGAGGAGAGCACTGCTGATCAGACTAGGCCC +
Preference number: 6 (lower is better)
Translates to: SKAESHTKRSRT*NEESTADQTRP
Trigger: GGGCCTAGTCTGATCAGCAGTGCTCTCCTCGTTCAAGGTCCGTGAGCGTTTTGTGTGTGACTCAGCCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546626.1
CDS TCA 72 bp GCTGAAGCAGGTAGAGATCTTAGGGGGAAGGTACCATaGCCTTCTCCTGATGAAGCAGGCCTTGGAGTTCCA +
Preference number: 6 (lower is better)
Translates to: AEAGRDLRGKVP*PSPDEAGLGVP
Trigger: TGGAACTCCAAGGCCTGCTTCATCAGGAGAAGGTCATGGTACCTTCCCCCTAAGATCTCTACCTGCTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS GCA 72 bp CTCCTCCTTCTCCCGCTGCGCCTTGTAGGCATTGAATaGCTGCTTTTTCTCACTCAGTTTAGGCAAGGCACT +
Preference number: 6 (lower is better)
Translates to: LLLLPLRLVGIE*LLFLTQFRQGT
Trigger: AGTGCCTTGCCTAAACTGAGTGAGAAAAAGCAGGCATTCAATGCCTACAAGGCGCAGCGGGAGAAGGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548825.7
CDS GCA 72 bp CTCCAGCAGACTATTGAAGGTCAGCTTGATGTTGCCTaGGTCCAGTGCGGCAGCCCTCTTGTCAAAGCTTAT +
Preference number: 6 (lower is better)
Translates to: LQQTIEGQLDVA*VQCGSPLVKAY
Trigger: ATAAGCTTTGACAAGAGGGCTGCCGCACTGGACGCAGGCAACATCAAGCTGACCTTCAATAGTCTGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000546626.1
ENST00000548399.1
ENST00000548825.7
ENST00000549547.1
CDS CCA 72 bp GACTTGTCCAAGGTCACGCTGCTAGCATGTGGCTTCTaGCTCAAGTCCACAGCCCTAACACTACAATCTGCT +
Preference number: 6 (lower is better)
Translates to: DLSKVTLLACGF*LKSTALTLQSA
Trigger: AGCAGATTGTAGTGTTAGGGCTGTGGACTTGAGCCAGAAGCCACATGCTAGCAGCGTGACCTTGGACAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508736.1
ENST00000527253.2
CDS CAA 72 bp TCTTGTTTGACTAGAACCTCTAGGTCATCCAGATCCTaGGGCCGGGTCCAGCGGGACTCTTTACTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: SCLTRTSRSSRS*GRVQRDSLLWL
Trigger: CAACCAGAGTAAAGAGTCCCGCTGGACCCGGCCCAAGGATCTGGATGACCTAGAGGTTCTAGTCAAACAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261897.5
ENST00000380281.5
ENST00000548436.5
ENST00000548825.7
ENST00000551111.1
ENST00000551320.1
CDS CAA 90 bp ATCTTAGGGGGAAGGTACCATGACCTTCTCCTGATGAAGCAGGCCTaGGAGTTCCAGCTGAAGAAGGCTCAGAATGCTACAGGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: ILGGRYHDLLLMKQA*EFQLKKAQNATGQA
Trigger: TGCCTGACCTGTAGCATTCTGAGCCTTCTTCAGCTGGAACTCCAAGGCCTGCTTCATCAGGAGAAGGTCATGGTACCTTCCCCCTAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS CAA 90 bp TTTAGCTACCACCTGGCCTGGTTCAAACTGGGGAAGGTGGACTTCTaGAGATCCTATGGAGGCATTTCCAGGGAGGGTGAGGAATGGTCA +
Preference number: 6 (lower is better)
Translates to: FSYHLAWFKLGKVDF*RSYGGISREGEEWS
Trigger: TGACCATTCCTCACCCTCCCTGGAAATGCCTCCATAGGATCTCAAGAAGTCCACCTTCCCCAGTTTGAACCAGGCCAGGTGGTAGCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551111.1
CDS CAA 90 bp GGGAGCTGGACAAGGCACGTGAGTAACAAGAGAATGTATATGCCTTaGGGGATGAGTGGGAAACTAGAAGAGCTGAGTACATGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: GSWTRHVSNKRMYMP*GMSGKLEELSTWLA
Trigger: CGCCAGCCATGTACTCAGCTCTTCTAGTTTCCCACTCATCCCCAAAGGCATATACATTCTCTTGTTACTCACGTGCCTTGTCCAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS CAA 72 bp GGAAGGTACCATGACCTTCTCCTGATGAAGCAGGCCTaGGAGTTCCAGCTGAAGAAGGCTCAGAATGCTACA +
Preference number: 6 (lower is better)
Translates to: GRYHDLLLMKQA*EFQLKKAQNAT
Trigger: TGTAGCATTCTGAGCCTTCTTCAGCTGGAACTCCAAGGCCTGCTTCATCAGGAGAAGGTCATGGTACCTTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508736.1
CDS TCA 72 bp AGGCAAAGAAAGCCTGCACGGGCCAAGCTAGGGGGTTaGTATCTCAGAGGGTTTCAATCTGTGCATGAGAAT +
Preference number: 6 (lower is better)
Translates to: RQRKPARAKLGG*YLRGFQSVHEN
Trigger: ATTCTCATGCACAGATTGAAACCCTCTGAGATATCAACCCCCTAGCTTGGCCCGTGCAGGCTTTCTTTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552301.1
CDS GCA 72 bp AGGCTCTGGAGGAGTCAAACAATGCATAAGGTCCTGTaGAACCCTCAGACTCCTATACCTCGTGGGAATTTG +
Preference number: 6 (lower is better)
Translates to: RLWRSQTMHKVL*NPQTPIPRGNL
Trigger: CAAATTCCCACGAGGTATAGGAGTCTGAGGGTTGCACAGGACCTTATGCATTGTTTGACTCCTCCAGAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547764.1
ENST00000551063.5
ENST00000552301.1
CDS TCA 72 bp AGCATAAGAAGGCACAGCAAGATCCCCAGGTGCTACTaGCTCTTCTGGGGACAAAGAGGATGTGAAGAACTA +
Preference number: 6 (lower is better)
Translates to: SIRRHSKIPRCY*LFWGQRGCEEL
Trigger: TAGTTCTTCACATCCTCTTTGTCCCCAGAAGAGTCAGTAGCACCTGGGGATCTTGCTGTGCCTTCTTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS TCA 72 bp GAATGGTCAGGGACCTTGGGATCAGAGGAACCATCATaGATATGGTTAGAGACTAAGGGAAGGCCAAGGACT +
Preference number: 6 (lower is better)
Translates to: EWSGTLGSEEPS*IWLETKGRPRT
Trigger: AGTCCTTGGCCTTCCCTTAGTCTCTAACCATATTCATGATGGTTCCTCTGATCCCAAGGTCCCTGACCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551111.1
CDS TCA 72 bp CAGGTGCTACTGACTCTTCTGGGGACAAAGAGGATGTaGAGAACTATATTCATGTGTCCACAGTGTGTGGCT +
Preference number: 6 (lower is better)
Translates to: QVLLTLLGTKRM*RTIFMCPQCVA
Trigger: AGCCACACACTGTGGACACATGAATATAGTTCTTCACATCCTCTTTGTCCCCAGAAGAGTCAGTAGCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS TCA 72 bp CTCTGTTCATTCTTCACAGGCAGGAACCTCATGCTCTaGGGAAGTCTAAGTCCAGTTTTCCTTCTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: LCSFFTGRNLML*GSLSPVFLLQL
Trigger: AAGCTGGAGAAGGAAAACTGGACTTAGACTTCCTCAGAGCATGAGGTTCCTGCCTGTGAAGAATGAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551269.1
CDS GCA 72 bp CTGGCTCAAGTCCACAGCCCTAACACTACAATCTGCTaGTTCTCTATAGGATATTTCTACCCAGCTCTCAGA +
Preference number: 6 (lower is better)
Translates to: LAQVHSPNTTIC*FSIGYFYPALR
Trigger: TCTGAGAGCTGGGTAGAAATATCCTATAGAGAAGCAGCAGATTGTAGTGTTAGGGCTGTGGACTTGAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508736.1
ENST00000527253.2
CDS GCA 72 bp CTTCTGGCTCAAGTCCACAGCCCTAACACTACAATCTaGTGCTTCTCTATAGGATATTTCTACCCAGCTCTC +
Preference number: 6 (lower is better)
Translates to: LLAQVHSPNTTI*CFSIGYFYPAL
Trigger: GAGAGCTGGGTAGAAATATCCTATAGAGAAGCAGCAGATTGTAGTGTTAGGGCTGTGGACTTGAGCCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508736.1
ENST00000527253.2
CDS GCA 72 bp GGTAACAATTTCATCTTCTTAAAGGCAAAGAAAGCCTaGACGGGCCAAGCTAGGGGGTTGATATCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: GNNFIFLKAKKA*TGQARGLISQR
Trigger: CCTCTGAGATATCAACCCCCTAGCTTGGCCCGTGCAGGCTTTCTTTGCCTTTAAGAAGATGAAATTGTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552301.1
CDS CAA 72 bp CAGCTCCATTCTTCGTTCTCCTCAAGTGAGAGTATTTaGTTGAGACAACTCCCGAGGCTCATTCCTTCACAG +
Preference number: 6 (lower is better)
Translates to: QLHSSFSSSESI*LRQLPRLIPSQ
Trigger: CTGTGAAGGAATGAGCCTCGGGAGTTGTCTCAACAAAATACTCTCACTTGAGGAGAACGAAGAATGGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS TCA 72 bp TCCATTCTTCGTTCTCCTCAAGTGAGAGTATTTTGTTaGGACAACTCCCGAGGCTCATTCCTTCACAGTGGA +
Preference number: 6 (lower is better)
Translates to: SILRSPQVRVFC*DNSRGSFLHSG
Trigger: TCCACTGTGAAGGAATGAGCCTCGGGAGTTGTCTCAACAAAATACTCTCACTTGAGGAGAACGAAGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS TCA 72 bp AATCGCATAGCAGCTCCATTCTTCGTTCTCCTCAAGTaGGAGTATTTTGTTGAGACAACTCCCGAGGCTCAT +
Preference number: 6 (lower is better)
Translates to: NRIAAPFFVLLK*EYFVETTPEAH
Trigger: ATGAGCCTCGGGAGTTGTCTCAACAAAATACTCTCACTTGAGGAGAACGAAGAATGGAGCTGCTATGCGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548436.5
CDS GCA 72 bp AGAAGTTTCTCTAAAGGCTCTGGAGGAGTCAAACAATaGATAAGGTCCTGTGCAACCCTCAGACTCCTATAC +
Preference number: 6 (lower is better)
Translates to: RSFSKGSGGVKQ*IRSCATLRLLY
Trigger: GTATAGGAGTCTGAGGGTTGCACAGGACCTTATGCATTGTTTGACTCCTCCAGAGCCTTTAGAGAAACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547764.1
ENST00000551063.5
ENST00000552301.1
CDS GCA 72 bp TCTGGCAAGCATGCAGAGTGTCTGACATTCTTCTCCTaGTTTGGTAACAATTTCATCTTCTTAAAGGCAAAG +
Preference number: 6 (lower is better)
Translates to: SGKHAECLTFFS*FGNNFIFLKAK
Trigger: CTTTGCCTTTAAGAAGATGAAATTGTTACCAAAGCAGGAGAAGAATGTCAGACACTCTGCATGCTTGCCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552301.1