RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRPF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000136875

Ensembl transcript IDs: ENST00000374198.5, ENST00000374199.9, ENST00000488937.1

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTaGAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTAC +
Preference number: 1 (lower is better)
Translates to: LPDAVSIPSKLNRKR*SLLHCITIGVAAVY
Trigger: GTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR GCA 90 bp CTGGAGTGGGGGCTGACATGGAAATCCAATTCTACTGAGGGTCTATaGATGGTAATTGGCAGAAAACATGATAGAACTAAACACTTCAAT +
Preference number: 1 (lower is better)
Translates to: LEWGLTWKSNSTEGL*MVIGRKHDRTKHFN
Trigger: ATTGAAGTGTTTAGTTCTATCATGTTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAGCCCCCACTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR TCA 90 bp TTGGCAGAAAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTaGGGAAAACAGCTCCTTAGAGAGAGCTTGAGGTTCAAGTCCTTT +
Preference number: 1 (lower is better)
Translates to: LAENMIELNTSILLV*GKQLLRESLRFKSF
Trigger: AAAGGACTTGAACCTCAAGCTCTCTCTAAGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTTTCTGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR GCA 90 bp TGTGGTGAGCTGTGTTCGCACTACTGCACTCCAATCTCGGCGACAAAGCGAGACAACCATCGGCGTGGCTaGGGTCTACTGCTTCACATC +
Preference number: 2 (lower is better)
Translates to: CGELCSHYCTPISATKRDNHRRG*GLLLHI
Trigger: GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTT...GTCTCGCTTTGTCGCCGAGATTGGAGTGCAGTAGTGCGAACACAGCTCACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR GCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGTGCAGAGACGGCATTTaGCATGTTGCCCAGGCTCGT +
Preference number: 2 (lower is better)
Translates to: WLRSTASHPILQGKEKCSCRDGI*HVAQAR
Trigger: ACGAGCCTGGGCAACATGGCAAATGCCGTCTCTGCA...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR CCA 90 bp CAGGGTCCACAGAATAGAGCTGACCAAAGCCATTGTCAACCTCTCTGCAACAGCCCAGGCCTGGCTTACTaGCAGTCTGGCCCAAAATGC +
Preference number: 2 (lower is better)
Translates to: QGPQNRADQSHCQPLCNSPGLAY*QSGPKC
Trigger: GCATTTTGGGCCAGACTGCCAGTAAGCCAGGCCTGG...GCTGTTGCAGAGAGGTTGACAATGGCTTTGGTCAGCTCTATTCTGTGGACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR TCA 90 bp TGTGGTGAGCTGTGTTCGCACTACTGCACTCCAATCTCGGCGACAAAGCGAGACTGTAGTACAACGGTGTaGTCTTGGCTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: CGELCSHYCTPISATKRDCSTTV*SWLTAT
Trigger: GGTTGCAGTGAGCCAAGATCACACCGTTGTACTACA...GTCTCGCTTTGTCGCCGAGATTGGAGTGCAGTAGTGCGAACACAGCTCACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR CCA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATCACCTAGGGATTaGGCTGCCTTCCTGGAGTGG +
Preference number: 2 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHIPSPRD*AAFLEW
Trigger: CCACTCCAGGAAGGCAGCCCAATCCCTAGGTGATGG...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR CAA 90 bp GTGATCCCAGTTACACAGGATGAGGGGATGAGGCAGGAGAATCATTaGAGCACAGGAAGTCAAGGCTGTGGTGAGCTGTGTTCGCACTAC +
Preference number: 2 (lower is better)
Translates to: VIPVTQDEGMRQENH*STGSQGCGELCSHY
Trigger: GTAGTGCGAACACAGCTCACCACAGCCTTGACTTCCTGTGCTCAAATGATTCTCCTGCCTCATCCCCTCATCCTGTGTAACTGGGATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR TCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGATGTGCCTCTTTACCTaGGGGCTTCCAGACTATAGT +
Preference number: 2 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGMCLFT*GLPDYS
Trigger: ACTATAGTCTGGAAGCCCTCAGGTAAAGAGGCACAT...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR CCA 90 bp ATTGTAATTGAGTCCAGGCCTGGCTTACTGGCAGTCTGGCCCAAAATGCAAACACCATCACCTAGGGATTaGGCTGCCTTCCTGGAGTGG +
Preference number: 2 (lower is better)
Translates to: IVIESRPGLLAVWPKMQTPSPRD*AAFLEW
Trigger: CCACTCCAGGAAGGCAGCCCAATCCCTAGGTGATGG...TGTTTGCATTTTGGGCCAGACTGCCAGTAAGCCAGGCCTGGACTCAATTACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR TCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGTCCTTAGAGAGAGCTTaGGGTTCAAGTCCTTTTCCC +
Preference number: 2 (lower is better)
Translates to: WLRSTASHPILQGKEKCSSLERA*GSSPFP
Trigger: GGGAAAAGGACTTGAACCTCAAGCTCTCTCTAAGGA...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR TCA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCATGTGCCTCTTTACCTaGGGGCTTCCAGACTATAGT +
Preference number: 2 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLMCLFT*GLPDYS
Trigger: ACTATAGTCTGGAAGCCCTCAGGTAAAGAGGCACAT...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR TCA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGTTAACCAATGAGTGGTaGGATGTGCCTCTTTACCTG +
Preference number: 2 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVLTNEW*DVPLYL
Trigger: CAGGTAAAGAGGCACATCTCACCACTCATTGGTTAA...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR TCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGGCATTGTTTAACCAATaGGTGGTGAGATGTGCCTCT +
Preference number: 2 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGALFNQ*VVRCAS
Trigger: AGAGGCACATCTCACCACTCATTGGTTAAACAATGC...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR CCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGAGCCACCTTGCTCTCTaGGTCATATGTAGTCCTGAA +
Preference number: 2 (lower is better)
Translates to: WLRSTASHPILQGKEKCSSHLAL*VICSPE
Trigger: TTCAGGACTACATATGACCCAGAGAGCAAGGTGGCT...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR TCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGGCATTGTTTAACCAATaGGTGGTGAGATGTGCCTCT +
Preference number: 2 (lower is better)
Translates to: WLRSTASHPILQGKEKCSALFNQ*VVRCAS
Trigger: AGAGGCACATCTCACCACTCATTGGTTAAACAATGC...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR TCA 90 bp GTTACACAGGATGAGGGGATGAGGCAGGAGAATCATTTGAGCACAGGAAGTCAATCCTGGAGTGGGGGCTaGCATGGAAATCCAATTCTA +
Preference number: 2 (lower is better)
Translates to: VTQDEGMRQENHLSTGSQSWSGG*HGNPIL
Trigger: TAGAATTGGATTTCCATGTCAGCCCCCACTCCAGGA...TTGACTTCCTGTGCTCAAATGATTCTCCTGCCTCATCCCCTCATCCTGTGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR TCA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGCTCGTCTTGAACTCCTaGGCTCAAGCGATCTACCCA +
Preference number: 2 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRLVLNS*AQAIYP
Trigger: TGGGTAGATCGCTTGAGCTCAGGAGTTCAAGACGAG...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR TCA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGAAATCCAATTCTACTaGGGGTCTATGCATGGTAAT +
Preference number: 2 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLEIQFY*GSMHGN
Trigger: ATTACCATGCATAGACCCTCAGTAGAATTGGATTTC...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR CCA 90 bp CAGGGTCCACAGAATAGAGCTGACCAAAGCCATTGTCAACCTCTCTGCAACAGCACAATGGTTTTGCTTTaGGGTAACATGAAGGTTGCC +
Preference number: 2 (lower is better)
Translates to: QGPQNRADQSHCQPLCNSTMVLL*GNMKVA
Trigger: GGCAACCTTCATGTTACCCCAAAGCAAAACCATTGT...GCTGTTGCAGAGAGGTTGACAATGGCTTTGGTCAGCTCTATTCTGTGGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR TCA 90 bp CAGGGTCCACAGAATAGAGCTGACCAAAGCCATTGTCAACCTCTCTGCAACAGCGAAATCCAATTCTACTaGGGGTCTATGCATGGTAAT +
Preference number: 2 (lower is better)
Translates to: QGPQNRADQSHCQPLCNSEIQFY*GSMHGN
Trigger: ATTACCATGCATAGACCCTCAGTAGAATTGGATTTC...GCTGTTGCAGAGAGGTTGACAATGGCTTTGGTCAGCTCTATTCTGTGGACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR GCA 90 bp CAGGGTCCACAGAATAGAGCTGACCAAAGCCATTGTCAACCTCTCTGCAACAGCTCTACTGAGGGTCTATaGATGGTAATTGGCAGAAAA +
Preference number: 2 (lower is better)
Translates to: QGPQNRADQSHCQPLCNSSTEGL*MVIGRK
Trigger: TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGA...GCTGTTGCAGAGAGGTTGACAATGGCTTTGGTCAGCTCTATTCTGTGGACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR GCA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGAACCATCGGCGTGGCTaGGGTCTACTGCTTCACATC +
Preference number: 2 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLNHRRG*GLLLHI
Trigger: GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTT...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR TCA 90 bp GTTACACAGGATGAGGGGATGAGGCAGGAGAATCATTTGAGCACAGGAAGTCAAGTTAAGAATTGTAATTaGGTCCAGGCCTGGCTTACT +
Preference number: 2 (lower is better)
Translates to: VTQDEGMRQENHLSTGSQVKNCN*VQAWLT
Trigger: AGTAAGCCAGGCCTGGACTCAATTACAATTCTTAAC...TTGACTTCCTGTGCTCAAATGATTCTCCTGCCTCATCCCCTCATCCTGTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR CCA 90 bp GGAGACATAAATCAGAGTAATCCATATTTGAGATCATCCATTATATCCCAAACCGCTGCCTTCCTGGAGTaGGGGCTGACATGGAAATCC +
Preference number: 2 (lower is better)
Translates to: GDINQSNPYLRSSIISQTAAFLE*GLTWKS
Trigger: GGATTTCCATGTCAGCCCCCACTCCAGGAAGGCAGC...GGTTTGGGATATAATGGATGATCTCAAATATGGATTACTCTGATTTATGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR TCA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAATCCTTAGAGAGAGCTTaGGGTTCAAGTCCTTTTCCC +
Preference number: 2 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKSLERA*GSSPFP
Trigger: GGGAAAAGGACTTGAACCTCAAGCTCTCTCTAAGGA...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR GCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAATCTACTGAGGGTCTATaGATGGTAATTGGCAGAAAA +
Preference number: 2 (lower is better)
Translates to: QSCLMLSAFQANSIGRGESTEGL*MVIGRK
Trigger: TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGA...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR GCA 90 bp GTTACACAGGATGAGGGGATGAGGCAGGAGAATCATTTGAGCACAGGAAGTCAACATTGTCAACCTCTCTaGAACAGCAAATTAAGTTTT +
Preference number: 2 (lower is better)
Translates to: VTQDEGMRQENHLSTGSQHCQPL*NSKLSF
Trigger: AAAACTTAATTTGCTGTTGCAGAGAGGTTGACAATG...TTGACTTCCTGTGCTCAAATGATTCTCCTGCCTCATCCCCTCATCCTGTGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR TCA 90 bp GGAGACATAAATCAGAGTAATCCATATTTGAGATCATCCATTATATCCCAAACCCAGTTCAGAGTTGCCTaGTGCTGTCAGCATTCCAAG +
Preference number: 2 (lower is better)
Translates to: GDINQSNPYLRSSIISQTQFRVA*CCQHSK
Trigger: CTTGGAATGCTGACAGCATCAGGCAACTCTGAACTG...GGTTTGGGATATAATGGATGATCTCAAATATGGATTACTCTGATTTATGTCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR TCA 90 bp AACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCTTTCTAAATCAATTCTTCTCGTTTaGGGAAAACAGCTCCTTAGA +
Preference number: 2 (lower is better)
Translates to: NSQEKGGCTIETSCLLSKSILLV*GKQLLR
Trigger: TCTAAGGAGCTGTTTTCCTCAAACGAGAAGAATTGA...TTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR TCA 90 bp GGAGACATAAATCAGAGTAATCCATATTTGAGATCATCCATTATATCCCAAACCTGCTTTGGGGTAACATaGAGGTTGCCAAACTTCAAA +
Preference number: 2 (lower is better)
Translates to: GDINQSNPYLRSSIISQTCFGVT*RLPNFK
Trigger: TTTGAAGTTTGGCAACCTTCATGTTACCCCAAAGCA...GGTTTGGGATATAATGGATGATCTCAAATATGGATTACTCTGATTTATGTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR TCA 90 bp GGAGACATAAATCAGAGTAATCCATATTTGAGATCATCCATTATATCCCAAACCCATTTGTTTGACTCCTaGCACAATGGTTTTGCTTTG +
Preference number: 2 (lower is better)
Translates to: GDINQSNPYLRSSIISQTHLFDS*HNGFAL
Trigger: CAAAGCAAAACCATTGTGTCAGGAGTCAAACAAATG...GGTTTGGGATATAATGGATGATCTCAAATATGGATTACTCTGATTTATGTCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR GCA 72 bp GGAAGTCAAGGCTGTGGTGAGCTGTGTTCGCACTACTaGACTCCAATCTCGGCGACAAAGCGAGACCCTGTC +
Preference number: 3 (lower is better)
Translates to: GSQGCGELCSHY*TPISATKRDPV
Trigger: GACAGGGTCTCGCTTTGTCGCCGAGATTGGAGTGCAGTAGTGCGAACACAGCTCACCACAGCCTTGACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR-3UTR CAA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGTTGCAGAGACGGCATTaGCCATGTTGCCCAGGCTCG +
Preference number: 3 (lower is better)
Translates to: WLRSTASHPILQGKEKCSLQRRH*PCCPGS
Trigger: CGAGCCTGGGCAACATGGCAAATGCCGTCTCTGCAA...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR GCA 72 bp CTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTaGTTCACATCCCATTCTCCAGGGAAAGGAAAAGTG +
Preference number: 3 (lower is better)
Translates to: LHCITIGVAAVY*FTSHSPGKGKV
Trigger: CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR GCA 72 bp GTGAAGTCTTCTTCACTGTATAACCATCGGCGTGGCTaGGGTCTACTGCTTCACATCCCATTCTCCAGGGAA +
Preference number: 3 (lower is better)
Translates to: VKSSSLYNHRRG*GLLLHIPFSRE
Trigger: TTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR CAA 90 bp ATTGTAATTGAGTCCAGGCCTGGCTTACTGGCAGTCTGGCCCAAAATGCAAACACCTGACACAATGGTTTaGCTTTGGGGTAACATGAAG +
Preference number: 3 (lower is better)
Translates to: IVIESRPGLLAVWPKMQTPDTMV*LWGNMK
Trigger: CTTCATGTTACCCCAAAGCAAAACCATTGTGTCAGG...TGTTTGCATTTTGGGCCAGACTGCCAGTAAGCCAGGCCTGGACTCAATTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR TCA 72 bp GTGCTCGCTATGATGCATTGTTTAACCAATGAGTGGTaGGATGTGCCTCTTTACCTGAGGGCTTCCAGACTA +
Preference number: 3 (lower is better)
Translates to: VLAMMHCLTNEW*DVPLYLRASRL
Trigger: TAGTCTGGAAGCCCTCAGGTAAAGAGGCACATCTCACCACTCATTGGTTAAACAATGCATCATAGCGAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR TCA 72 bp GCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTaGAGTCTTCTTCACTGTATAACCATCGGCGTGGCT +
Preference number: 3 (lower is better)
Translates to: AVSIPSKLNRKR*SLLHCITIGVA
Trigger: AGCCACGCCGATGGTTATACAGTGAAGAAGACTTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR CAA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTATAGTTCAGCCACCTaGCTCTCTGGGTCATATGTA +
Preference number: 3 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRYSSAT*LSGSYV
Trigger: TACATATGACCCAGAGAGCAAGGTGGCTGAACTATA...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR TCA 72 bp AGGAAAAGTGCTCGCTATGATGCATTGTTTAACCAATaGGTGGTGAGATGTGCCTCTTTACCTGAGGGCTTC +
Preference number: 3 (lower is better)
Translates to: RKSARYDALFNQ*VVRCASLPEGF
Trigger: GAAGCCCTCAGGTAAAGAGGCACATCTCACCACTCATTGGTTAAACAATGCATCATAGCGAGCACTTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR CAA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGATGTTCAGTTCAGAGTaGCCTGATGCTGTCAGCATT +
Preference number: 3 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLMFSSE*PDAVSI
Trigger: AATGCTGACAGCATCAGGCAACTCTGAACTGAACAT...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
3UTR-3UTR CAA 90 bp GGAGACATAAATCAGAGTAATCCATATTTGAGATCATCCATTATATCCCAAACCCCAAGAGAAAGGAGGTaGTACAATAGAGACGTCATG +
Preference number: 3 (lower is better)
Translates to: GDINQSNPYLRSSIISQTPRERR*YNRDVM
Trigger: CATGACGTCTCTATTGTACAACCTCCTTTCTCTTGG...GGTTTGGGATATAATGGATGATCTCAAATATGGATTACTCTGATTTATGTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR TCA 72 bp TTACTGTGTAATTTGAGAGTTCAGAGGCTGTATAGTTaGGGTGAAAAGAGGTGCATGACAGACAAGTTAAGA +
Preference number: 3 (lower is better)
Translates to: LLCNLRVQRLYS*GEKRCMTDKLR
Trigger: TCTTAACTTGTCTGTCATGCACCTCTTTTCACCTCAACTATACAGCCTCTGAACTCTCAAATTACACAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
3UTR CCA 72 bp AACATTTGTTTGACTCCTGACACAATGGTTTTGCTTTaGGGTAACATGAAGGTTGCCAAACTTCAAAGTAAA +
Preference number: 3 (lower is better)
Translates to: NICLTPDTMVLL*GNMKVAKLQSK
Trigger: TTTACTTTGAAGTTTGGCAACCTTCATGTTACCCCAAAGCAAAACCATTGTGTCAGGAGTCAAACAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGAGCCATGCTGGGCTCTaGAGCCGCGAGGCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: WLRSTASHPILQGKEKCSSHAGL*SREAPA
Trigger: CGCTGGGGCCTCGCGGCTCCAGAGCCCAGCATGGCT...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGCTCGCGAGGAAGCCATaGTGGGCTCTGGAGCCGCGA +
Preference number: 4 (lower is better)
Translates to: WLRSTASHPILQGKEKCSLARKP*WALEPR
Trigger: TCGCGGCTCCAGAGCCCAGCATGGCTTCCTCGCGAG...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp ATTGTAATTGAGTCCAGGCCTGGCTTACTGGCAGTCTGGCCCAAAATGCAAACAAGCCATGCTGGGCTCTaGAGCCGCGAGGCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: IVIESRPGLLAVWPKMQTSHAGL*SREAPA
Trigger: CGCTGGGGCCTCGCGGCTCCAGAGCCCAGCATGGCT...TGTTTGCATTTTGGGCCAGACTGCCAGTAAGCCAGGCCTGGACTCAATTACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR TCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGGCCCAGGAAACGTCCTaGAGGATGCCACATTACCCG +
Preference number: 4 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGAQETS*RMPHYP
Trigger: CGGGTAATGTGGCATCCTTCAGGACGTTTCCTGGGC...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCCCAGTTACACAGGATaGGGGGATGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVPSYTG*GDEAGE
Trigger: TTCTCCTGCCTCATCCCCTCATCCTGTGTAACTGGG...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGGACCGGAGAGACTTGTaGAGCTCTTGCATCTGGGAG +
Preference number: 4 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGDRRDL*SSCIWE
Trigger: CTCCCAGATGCAAGAGCTGCACAAGTCTCTCCGGTC...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGCCAAACTCGACCAAATaGATCCAGTCCCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGPNSTK*IQSPSA
Trigger: GGCACTGGGGGACTGGATGCATTTGGTCGAGTTTGG...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCGGGGACCAGCCTGGGTaGGTCCAGATCTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHIGDQPG*VQILAV
Trigger: CACAGCCAAGATCTGGACGCACCCAGGCTGGTCCCC...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGCTGCCTTCCTGGAGTaGGGGCTGACATGGAAATCC +
Preference number: 4 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLAAFLE*GLTWKS
Trigger: GGATTTCCATGTCAGCCCCCACTCCAGGAAGGCAGC...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGTGCCCTCGAAGAGTGTaGAGGAGGTTGCAATCAGGA +
Preference number: 4 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVCPRRV*RRLQSG
Trigger: TCCTGATTGCAACCTCCTTCACACTCTTCGAGGGCA...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGTCTTGAACTCCTaGGCTCAAGCGATCTACCCA +
Preference number: 4 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVLVLNS*AQAIYP
Trigger: TGGGTAGATCGCTTGAGCTCAGGAGTTCAAGACGAG...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGGTGGCATCCTCCTGTaGTCCCAGTTACACAGGATG +
Preference number: 4 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLGGILL*SQLHRM
Trigger: CATCCTGTGTAACTGGGATCACAGGAGGATGCCACC...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAACTCGCGAGGAAGCCATaGTGGGCTCTGGAGCCGCGA +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGELARKP*WALEPR
Trigger: TCGCGGCTCCAGAGCCCAGCATGGCTTCCTCGCGAG...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGCATCCAGTCCCCCAGTaGCAGCCAAAGAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: WLRSTASHPILQGKEKCSHPVPQ*QPKSHL
Trigger: AAGATGGCTCTTTGGCTGGCACTGGGGGACTGGATG...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGGTCACCACTGCCGGTTaGAATGTGATAGCCATTGGG +
Preference number: 4 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGVTTAG*NVIAIG
Trigger: CCCAATGGCTATCACATTGCAACCGGCAGTGGTGAC...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp CAGGGTCCACAGAATAGAGCTGACCAAAGCCATTGTCAACCTCTCTGCAACAGCATACGTGAGCCACCGTaGCCGGCCAAGAAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: QGPQNRADQSHCQPLCNSIREPP*PAKKPF
Trigger: GAAAGGCTTCTTGGCCGGGCACGGTGGCTCACGTAT...GCTGTTGCAGAGAGGTTGACAATGGCTTTGGTCAGCTCTATTCTGTGGACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CCA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGCAGCGGGGACCAGCCTaGGTGCGTCCAGATCTTGGC +
Preference number: 4 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRQRGPA*VRPDLG
Trigger: GCCAAGATCTGGACGCACCCAGGCTGGTCCCCGCTG...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAACAGCGGGGACCAGCCTaGGTGCGTCCAGATCTTGGC +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGEQRGPA*VRPDLG
Trigger: GCCAAGATCTGGACGCACCCAGGCTGGTCCCCGCTG...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGTGCAGGATCTCCTCTTaGGCCTCCAAATCCCATAAG +
Preference number: 4 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGCRISS*ASKSHK
Trigger: CTTATGGGATTTGGAGGCTCAAGAGGAGATCCTGCA...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCCAGCCATCCACAGCTTaGAGGTCCTGTCATATGAGC +
Preference number: 4 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLQPSTA*RSCHMS
Trigger: GCTCATATGACAGGACCTTCAAGCTGTGGATGGCTG...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGTCCTGGAGTGGGGGCTaGCATGGAAATCCAATTCTA +
Preference number: 4 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGSWSGG*HGNPIL
Trigger: TAGAATTGGATTTCCATGTCAGCCCCCACTCCAGGA...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGCTCGTCTTGAACTCCTaGGCTCAAGCGATCTACCCA +
Preference number: 4 (lower is better)
Translates to: WLRSTASHPILQGKEKCSLVLNS*AQAIYP
Trigger: TGGGTAGATCGCTTGAGCTCAGGAGTTCAAGACGAG...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp TGTGGTGAGCTGTGTTCGCACTACTGCACTCCAATCTCGGCGACAAAGCGAGACGACTTGTGCAGCTCTTaGATCTGGGAGGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: CGELCSHYCTPISATKRDDLCSS*IWEVLV
Trigger: AACAAGGACCTCCCAGATGCAAGAGCTGCACAAGTC...GTCTCGCTTTGTCGCCGAGATTGGAGTGCAGTAGTGCGAACACAGCTCACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp CAGGGTCCACAGAATAGAGCTGACCAAAGCCATTGTCAACCTCTCTGCAACAGCCATCCAGTCCCCCAGTaGCAGCCAAAGAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: QGPQNRADQSHCQPLCNSHPVPQ*QPKSHL
Trigger: AAGATGGCTCTTTGGCTGGCACTGGGGGACTGGATG...GCTGTTGCAGAGAGGTTGACAATGGCTTTGGTCAGCTCTATTCTGTGGACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGGTGGCTGCGGTCTACTaGTTCACATCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: WLRSTASHPILQGKEKCSVAAVY*FTSHSP
Trigger: TGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGTGCAGCTCTTGCATCTaGGAGGTCCTTGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGCSSCI*EVLVVS
Trigger: TGAGACAACAAGGACCTCCCAGATGCAAGAGCTGCA...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGGGCTTACTGGCAGTCTaGCCCAAAATGCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: WLRSTASHPILQGKEKCSGLLAV*PKMQTA
Trigger: GGCTGTTTGCATTTTGGGCCAGACTGCCAGTAAGCC...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR TCA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGGGCCTTCTAAGAACATaGTACAACGTCCTGTGCGTA +
Preference number: 4 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVGLLRT*YNVLCV
Trigger: TACGCACAGGACGTTGTATCATGTTCTTAGAAGGCC...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp CAGGGTCCACAGAATAGAGCTGACCAAAGCCATTGTCAACCTCTCTGCAACAGCGTGGAAACATTGATCTaGCGGGCTCGCTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QGPQNRADQSHCQPLCNSVETLI*RARFLL
Trigger: GAGAAGGAAGCGAGCCCGGCAGATCAATGTTTCCAC...GCTGTTGCAGAGAGGTTGACAATGGCTTTGGTCAGCTCTATTCTGTGGACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp TGTGGTGAGCTGTGTTCGCACTACTGCACTCCAATCTCGGCGACAAAGCGAGACGAGTGTGAAGGAGGTTaGAATCAGGAACAGACCAGA +
Preference number: 4 (lower is better)
Translates to: CGELCSHYCTPISATKRDECEGG*NQEQTR
Trigger: TCTGGTCTGTTCCTGATTGCAACCTCCTTCACACTC...GTCTCGCTTTGTCGCCGAGATTGGAGTGCAGTAGTGCGAACACAGCTCACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGTGCTTTAGTTTTGGTTaGCGTGGAAGAGGCTCGCGA +
Preference number: 4 (lower is better)
Translates to: WLRSTASHPILQGKEKCSCFSFG*RGRGSR
Trigger: TCGCGAGCCTCTTCCACGGCAACCAAAACTAAAGCA...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374198.5
CDS-3UTR CCA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCAGGTTGACATCTTTTaGGTCCAAGGAGACAGTGGA +
Preference number: 4 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVQVDIF*VQGDSG
Trigger: TCCACTGTCTCCTTGGACCCAAAAGATGTCAACCTG...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGGCCACACGCACTGTATaGCCTTCAATATCTGCCACT +
Preference number: 4 (lower is better)
Translates to: WLRSTASHPILQGKEKCSATRTV*PSISAT
Trigger: AGTGGCAGATATTGAAGGCCATACAGTGCGTGTGGC...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGCTGCCTGTCGCTCGCTaGTATGCTCTTCAATTTCAA +
Preference number: 4 (lower is better)
Translates to: WLRSTASHPILQGKEKCSLPVAR*YALQFQ
Trigger: TTGAAATTGAAGAGCATATCAGCGAGCGACAGGCAG...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGGCAAGCTTTGACCTCTaGGTCATCTGTGGAAACATT +
Preference number: 4 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGASFDL*VICGNI
Trigger: AATGTTTCCACAGATGACTCAGAGGTCAAAGCTTGC...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCACAAGAGGCCAGGTTaGCATCTTTTGGGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHIHKRPG*HLLGPR
Trigger: CCTTGGACCCAAAAGATGTCAACCTGGCCTCTTGTG...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCAGCCATCCACAGCTTaGAGGTCCTGTCATATGAGC +
Preference number: 4 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHIQPSTA*RSCHMS
Trigger: GCTCATATGACAGGACCTTCAAGCTGTGGATGGCTG...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGGCCTGGGCAACAAAGTaGAATCGTGTCTCTACCAAA +
Preference number: 4 (lower is better)
Translates to: WLRSTASHPILQGKEKCSAWATK*NRVSTK
Trigger: TTTGGTAGAGACACGATTTCACTTTGTTGCCCAGGC...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCGTGGAAACATTGATCTaGCGGGCTCGCTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHIVETLI*RARFLL
Trigger: GAGAAGGAAGCGAGCCCGGCAGATCAATGTTTCCAC...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGGAGTGTGAAGGAGGTTaGAATCAGGAACAGACCAGA +
Preference number: 4 (lower is better)
Translates to: WLRSTASHPILQGKEKCSECEGG*NQEQTR
Trigger: TCTGGTCTGTTCCTGATTGCAACCTCCTTCACACTC...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGATGGCCTTCAATATCTaGCACTGGTTCATCACTGTC +
Preference number: 4 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVMAFNI*HWFITV
Trigger: GACAGTGATGAACCAGTGGCAGATATTGAAGGCCAT...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAACTAGGCCCATCACTTTaGCTTCGTGGCCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGELGPSL*LRGQPE
Trigger: CTCTGGCTGGCCACGAAGGCAAAGTGATGGGCCTAG...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGTCCATAATAGATGTGTaGTTTCTTCACGACCGGAGC +
Preference number: 4 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGSIIDV*FLHDRS
Trigger: GCTCCGGTCGTGAAGAAACCACACATCTATTATGGA...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp GTTACACAGGATGAGGGGATGAGGCAGGAGAATCATTTGAGCACAGGAAGTCAAAACGGTCATAGCAGGTaGTGCCCAGGAAACGTCCTG +
Preference number: 4 (lower is better)
Translates to: VTQDEGMRQENHLSTGSQNGHSR*CPGNVL
Trigger: CAGGACGTTTCCTGGGCACCACCTGCTATGACCGTT...TTGACTTCCTGTGCTCAAATGATTCTCCTGCCTCATCCCCTCATCCTGTGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CCA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGGCTGCCTTCCTGGAGTaGGGGCTGACATGGAAATCC +
Preference number: 4 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRAAFLE*GLTWKS
Trigger: GGATTTCCATGTCAGCCCCCACTCCAGGAAGGCAGC...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCAGCCACCTTGCTCTCTaGGTCATATGTAGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLSHLAL*VICSPE
Trigger: TTCAGGACTACATATGACCCAGAGAGCAAGGTGGCT...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAACATCTGTGGAAACATTaGTCTGCCGGGCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGEHLWKH*SAGLAS
Trigger: GGAAGCGAGCCCGGCAGATCAATGTTTCCACAGATG...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGCCTCTCCAAAAAGTGTaGTGGGTTCCCCCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRPLQKV*WVPPRL
Trigger: GAGCCTTGGGGGAACCCATCACACTTTTTGGAGAGG...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp ATTGTAATTGAGTCCAGGCCTGGCTTACTGGCAGTCTGGCCCAAAATGCAAACACACAAGAGGCCAGGTTaGCATCTTTTGGGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: IVIESRPGLLAVWPKMQTHKRPG*HLLGPR
Trigger: CCTTGGACCCAAAAGATGTCAACCTGGCCTCTTGTG...TGTTTGCATTTTGGGCCAGACTGCCAGTAAGCCAGGCCTGGACTCAATTACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR TCA 90 bp CAGGGTCCACAGAATAGAGCTGACCAAAGCCATTGTCAACCTCTCTGCAACAGCGCCAAAGAGCCATCTTaGTGGAAGGCAATGTCATAC +
Preference number: 4 (lower is better)
Translates to: QGPQNRADQSHCQPLCNSAKEPS*WKAMSY
Trigger: GTATGACATTGCCTTCCATCAAGATGGCTCTTTGGC...GCTGTTGCAGAGAGGTTGACAATGGCTTTGGTCAGCTCTATTCTGTGGACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCTCCAGCTTCGATCCCTaGTTTAAGTCCGTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHISSFDP*FKSVFP
Trigger: GGGAAAGACGGACTTAAAGCAGGGATCGAAGCTGGA...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp ATTGTAATTGAGTCCAGGCCTGGCTTACTGGCAGTCTGGCCCAAAATGCAAACAAAACGTCCTGAAGGATaGCACATTACCCGCGCCACA +
Preference number: 4 (lower is better)
Translates to: IVIESRPGLLAVWPKMQTKRPEG*HITRAT
Trigger: TGTGGCGCGGGTAATGTGGCATCCTTCAGGACGTTT...TGTTTGCATTTTGGGCCAGACTGCCAGTAAGCCAGGCCTGGACTCAATTACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAAGGTCATAGCAGGTGGTaGCCAGGAAACGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGEGHSRW*PGNVLK
Trigger: CTTCAGGACGTTTCCTGGGCACCACCTGCTATGACC...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCCAAGTGGCTATGAGCTaGCCATCGGAAGAAATATCT +
Preference number: 4 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLQVAMS*PSEEIS
Trigger: AGATATTTCTTCCGATGGGCAGCTCATAGCCACTTG...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAAAACCATCGGCGTGGCTaGGGTCTACTGCTTCACATC +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGENHRRG*GLLLHI
Trigger: GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTT...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCTCCATAATAGATGTGTaGTTTCTTCACGACCGGAGC +
Preference number: 4 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLSIIDV*FLHDRS
Trigger: GCTCCGGTCGTGAAGAAACCACACATCTATTATGGA...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGTTCAATATCTGCCACTaGTTCATCACTGTCGAGACT +
Preference number: 4 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGFNICH*FITVET
Trigger: AGTCTCGACAGTGATGAACCAGTGGCAGATATTGAA...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGAGCAAGAAGTTCCCATaGATAGGCTCAAACTTGACA +
Preference number: 4 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVSKKFP*IGSNLT
Trigger: TGTCAAGTTTGAGCCTATCCATGGGAACTTCTTGCT...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGCCCTCGAAGAGTGTaGAGGAGGTTGCAATCAGGA +
Preference number: 4 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRCPRRV*RRLQSG
Trigger: TCCTGATTGCAACCTCCTTCACACTCTTCGAGGGCA...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCGCCAAAGAGCCATCTTaGTGGAAGGCAATGTCATAC +
Preference number: 4 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHIAKEPS*WKAMSY
Trigger: GTATGACATTGCCTTCCATCAAGATGGCTCTTTGGC...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp ATTGTAATTGAGTCCAGGCCTGGCTTACTGGCAGTCTGGCCCAAAATGCAAACAATGAGCAAGTGGCTATaGGCTGCCCATCGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: IVIESRPGLLAVWPKMQTMSKWL*AAHRKK
Trigger: TTTCTTCCGATGGGCAGCTCATAGCCACTTGCTCAT...TGTTTGCATTTTGGGCCAGACTGCCAGTAAGCCAGGCCTGGACTCAATTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR TCA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCTCCTTAGAGAGAGCTTaGGGTTCAAGTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHISLERA*GSSPFP
Trigger: GGGAAAAGGACTTGAACCTCAAGCTCTCTCTAAGGA...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGGAAATCCAATTCTACTaGGGGTCTATGCATGGTAAT +
Preference number: 4 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGEIQFY*GSMHGN
Trigger: ATTACCATGCATAGACCCTCAGTAGAATTGGATTTC...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGGAAATCCAATTCTACTaGGGGTCTATGCATGGTAAT +
Preference number: 4 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVEIQFY*GSMHGN
Trigger: ATTACCATGCATAGACCCTCAGTAGAATTGGATTTC...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGCTCAATAGGAAGAGGTaGAGTCTTCTTCACTGTATA +
Preference number: 4 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGLNRKR*SLLHCI
Trigger: TATACAGTGAAGAAGACTTCACCTCTTCCTATTGAG...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp TGTGGTGAGCTGTGTTCGCACTACTGCACTCCAATCTCGGCGACAAAGCGAGACCTCAATAGGAAGAGGTaGAGTCTTCTTCACTGTATA +
Preference number: 4 (lower is better)
Translates to: CGELCSHYCTPISATKRDLNRKR*SLLHCI
Trigger: TATACAGTGAAGAAGACTTCACCTCTTCCTATTGAG...GTCTCGCTTTGTCGCCGAGATTGGAGTGCAGTAGTGCGAACACAGCTCACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR TCA 90 bp ATTGTAATTGAGTCCAGGCCTGGCTTACTGGCAGTCTGGCCCAAAATGCAAACACAGTTCAGAGTTGCCTaGTGCTGTCAGCATTCCAAG +
Preference number: 4 (lower is better)
Translates to: IVIESRPGLLAVWPKMQTQFRVA*CCQHSK
Trigger: CTTGGAATGCTGACAGCATCAGGCAACTCTGAACTG...TGTTTGCATTTTGGGCCAGACTGCCAGTAAGCCAGGCCTGGACTCAATTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR TCA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGTTAAGAATTGTAATTaGGTCCAGGCCTGGCTTACT +
Preference number: 4 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLVKNCN*VQAWLT
Trigger: AGTAAGCCAGGCCTGGACTCAATTACAATTCTTAAC...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR TCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAAAAGTCAAGGCTGTGGTaGGCTGTGTTCGCACTACTG +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGEKSRLW*AVFALL
Trigger: CAGTAGTGCGAACACAGCTCACCACAGCCTTGACTT...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGTGTCGCTCGCTGATATaGTCTTCAATTTCAAACACT +
Preference number: 4 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVCRSLI*SSISNT
Trigger: AGTGTTTGAAATTGAAGAGCATATCAGCGAGCGACA...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp ATTGTAATTGAGTCCAGGCCTGGCTTACTGGCAGTCTGGCCCAAAATGCAAACAAGGTGTTGTCACCACTaGCGGTTGCAATGTGATAGC +
Preference number: 4 (lower is better)
Translates to: IVIESRPGLLAVWPKMQTRCCHH*RLQCDS
Trigger: GCTATCACATTGCAACCGGCAGTGGTGACAACACCT...TGTTTGCATTTTGGGCCAGACTGCCAGTAAGCCAGGCCTGGACTCAATTACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAAGTGGCTGCGGTCTACTaGTTCACATCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGEVAAVY*FTSHSP
Trigger: TGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp GTTACACAGGATGAGGGGATGAGGCAGGAGAATCATTTGAGCACAGGAAGTCAATCAGGAATCTCCTTATaGAGTCGGGCCTCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: VTQDEGMRQENHLSTGSQSGISL*SRASSK
Trigger: CTTGGAAGAGGCCCGACTCCATAAGGAGATTCCTGA...TTGACTTCCTGTGCTCAAATGATTCTCCTGCCTCATCCCCTCATCCTGTGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CCA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCAGGTTGACATCTTTTaGGTCCAAGGAGACAGTGGA +
Preference number: 4 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHIQVDIF*VQGDSG
Trigger: TCCACTGTCTCCTTGGACCCAAAAGATGTCAACCTG...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp GTTACACAGGATGAGGGGATGAGGCAGGAGAATCATTTGAGCACAGGAAGTCAAGGTGCGTCCAGATCTTaGCTGTGTTATCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: VTQDEGMRQENHLSTGSQGASRS*LCYHRH
Trigger: GTGCCTATGATAACACAGCCAAGATCTGGACGCACC...TTGACTTCCTGTGCTCAAATGATTCTCCTGCCTCATCCCCTCATCCTGTGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR TCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGCGATCATCCCCAATCTaGCTGCAAAAATTATTCAAA +
Preference number: 4 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGRSSPI*LQKLFK
Trigger: TTTGAATAATTTTTGCAGTCAGATTGGGGATGATCG...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp ATTGTAATTGAGTCCAGGCCTGGCTTACTGGCAGTCTGGCCCAAAATGCAAACAATGTGCCTCTTTACCTaGGGGCTTCCAGACTATAGT +
Preference number: 4 (lower is better)
Translates to: IVIESRPGLLAVWPKMQTMCLFT*GLPDYS
Trigger: ACTATAGTCTGGAAGCCCTCAGGTAAAGAGGCACAT...TGTTTGCATTTTGGGCCAGACTGCCAGTAAGCCAGGCCTGGACTCAATTACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR TCA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCTTAACCAATGAGTGGTaGGATGTGCCTCTTTACCTG +
Preference number: 4 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHILTNEW*DVPLYL
Trigger: CAGGTAAAGAGGCACATCTCACCACTCATTGGTTAA...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCGCATTGTTTAACCAATaGGTGGTGAGATGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHIALFNQ*VVRCAS
Trigger: AGAGGCACATCTCACCACTCATTGGTTAAACAATGC...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGCATTTGTTTGACTCCTaGCACAATGGTTTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: WLRSTASHPILQGKEKCSHLFDS*HNGFAL
Trigger: CAAAGCAAAACCATTGTGTCAGGAGTCAAACAAATG...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAACTCAGCCAATACTTCTaGCTGTCGCTCGCTGATATG +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGELSQYF*LSLADM
Trigger: CATATCAGCGAGCGACAGGCAGAAGTATTGGCTGAG...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGGGGATGGAATACAATTaGTCCTACATTTGTGTTATG +
Preference number: 4 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGGMEYN*SYICVM
Trigger: CATAACACAAATGTAGGAGCAATTGTATTCCATCCC...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCATGGCCTTCAATATCTaGCACTGGTTCATCACTGTC +
Preference number: 4 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHIMAFNI*HWFITV
Trigger: GACAGTGATGAACCAGTGGCAGATATTGAAGGCCAT...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGAGGTGTTGTCACCACTaGCGGTTGCAATGTGATAGC +
Preference number: 4 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRRCCHH*RLQCDS
Trigger: GCTATCACATTGCAACCGGCAGTGGTGACAACACCT...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAACTAGGCCCATCACTTTaGCTTCGTGGCCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKLGPSL*LRGQPE
Trigger: CTCTGGCTGGCCACGAAGGCAAAGTGATGGGCCTAG...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAATGCAGCTCTTGCATCTaGGAGGTCCTTGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGECSSCI*EVLVVS
Trigger: TGAGACAACAAGGACCTCCCAGATGCAAGAGCTGCA...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCACAGTGGATTTGGGATaGAATACAATTGCTCCTACA +
Preference number: 4 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLTVDLG*NTIAPT
Trigger: TGTAGGAGCAATTGTATTCCATCCCAAATCCACTGT...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGGCCACACGCACTGTATaGCCTTCAATATCTGCCACT +
Preference number: 4 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRATRTV*PSISAT
Trigger: AGTGGCAGATATTGAAGGCCATACAGTGCGTGTGGC...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGGGTGCGTCCAGATCTTaGCTGTGTTATCATAGGCAC +
Preference number: 4 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRGASRS*LCYHRH
Trigger: GTGCCTATGATAACACAGCCAAGATCTGGACGCACC...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCCATCACCTAGGGATTaGGCTGCCTTCCTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLPSPRD*AAFLEW
Trigger: CCACTCCAGGAAGGCAGCCCAATCCCTAGGTGATGG...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCATCTGTGGAAACATTaGTCTGCCGGGCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLHLWKH*SAGLAS
Trigger: GGAAGCGAGCCCGGCAGATCAATGTTTCCACAGATG...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp AACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCTTTCTAAAGCCCAGGAAACGTCCTaGAGGATGCCACATTACCCG +
Preference number: 4 (lower is better)
Translates to: NSQEKGGCTIETSCLLSKAQETS*RMPHYP
Trigger: CGGGTAATGTGGCATCCTTCAGGACGTTTCCTGGGC...TTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp CAGGGTCCACAGAATAGAGCTGACCAAAGCCATTGTCAACCTCTCTGCAACAGCCATTTGTTTGACTCCTaGCACAATGGTTTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: QGPQNRADQSHCQPLCNSHLFDS*HNGFAL
Trigger: CAAAGCAAAACCATTGTGTCAGGAGTCAAACAAATG...GCTGTTGCAGAGAGGTTGACAATGGCTTTGGTCAGCTCTATTCTGTGGACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGGGTCATAGCAGGTGGTaGCCAGGAAACGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLGHSRW*PGNVLK
Trigger: CTTCAGGACGTTTCCTGGGCACCACCTGCTATGACC...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAATGTCATACACACCCATaGTATGGCCTTCCTGATGCA +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGECHTHP*YGLPDA
Trigger: TGCATCAGGAAGGCCATAGCATGGGTGTGTATGACA...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTGGGGACCAGCCTGGGTaGGTCCAGATCTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPGDQPG*VQILAV
Trigger: CACAGCCAAGATCTGGACGCACCCAGGCTGGTCCCC...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGTGCAGAGACGGCATTTaGCATGTTGCCCAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLCRDGI*HVAQAR
Trigger: ACGAGCCTGGGCAACATGGCAAATGCCGTCTCTGCA...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAATGCAGAGACGGCATTTaGCATGTTGCCCAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKCRDGI*HVAQAR
Trigger: ACGAGCCTGGGCAACATGGCAAATGCCGTCTCTGCA...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAATCTGATGAGCAGGGATaGTGTAGACGCAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKSDEQG*CRRNAA
Trigger: AGCGGCGTTGCGTCTACACCATCCCTGCTCATCAGA...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAATTAACCAATGAGTGGTaGGATGTGCCTCTTTACCTG +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGELTNEW*DVPLYL
Trigger: CAGGTAAAGAGGCACATCTCACCACTCATTGGTTAA...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp GTTACACAGGATGAGGGGATGAGGCAGGAGAATCATTTGAGCACAGGAAGTCAATGCTTTGGGGTAACATaGAGGTTGCCAAACTTCAAA +
Preference number: 4 (lower is better)
Translates to: VTQDEGMRQENHLSTGSQCFGVT*RLPNFK
Trigger: TTTGAAGTTTGGCAACCTTCATGTTACCCCAAAGCA...TTGACTTCCTGTGCTCAAATGATTCTCCTGCCTCATCCCCTCATCCTGTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAATGTTCAGTTCAGAGTTaGCTGATGCTGTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGECSVQS*LMLSAF
Trigger: GAATGCTGACAGCATCAGGCAACTCTGAACTGAACA...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp AACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCTTTCTAAATTTTGGTTGCCTGCGTaGAAGAGGCTCGCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: NSQEKGGCTIETSCLLSKFWLPA*KRLARK
Trigger: CTTCCTCGCGAGCCTCTTCCACGCAGGCAACCAAAA...TTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CCA 90 bp AACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCTTTCTAAATCTGATGAGCAGGGATaGTGTAGACGCAACGCCGCT +
Preference number: 4 (lower is better)
Translates to: NSQEKGGCTIETSCLLSKSDEQG*CRRNAA
Trigger: AGCGGCGTTGCGTCTACACCATCCCTGCTCATCAGA...TTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCGATCATCCCCAATCTaGCTGCAAAAATTATTCAAA +
Preference number: 4 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHIRSSPI*LQKLFK
Trigger: TTTGAATAATTTTTGCAGTCAGATTGGGGATGATCG...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGTGCAGGATCTCCTCTTaGGCCTCCAAATCCCATAAG +
Preference number: 4 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLCRISS*ASKSHK
Trigger: CTTATGGGATTTGGAGGCTCAAGAGGAGATCCTGCA...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGATGAGCAAGTGGCTATaGGCTGCCCATCGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLMSKWL*AAHRKK
Trigger: TTTCTTCCGATGGGCAGCTCATAGCCACTTGCTCAT...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGGAAGGTCCTGTCATATaGGCAAGTGGCTATGAGCTG +
Preference number: 4 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLEGPVI*ASGYEL
Trigger: CAGCTCATAGCCACTTGCTCATATGACAGGACCTTC...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAATCCTGGAGTGGGGGCTaGCATGGAAATCCAATTCTA +
Preference number: 4 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKSWSGG*HGNPIL
Trigger: TAGAATTGGATTTCCATGTCAGCCCCCACTCCAGGA...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAATGTAGTACAACGGTGTaGTCTTGGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKCSTTV*SWLTAT
Trigger: GGTTGCAGTGAGCCAAGATCACACCGTTGTACTACA...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp AACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCTTTCTAAAGTCACCACTGCCGGTTaGAATGTGATAGCCATTGGG +
Preference number: 4 (lower is better)
Translates to: NSQEKGGCTIETSCLLSKVTTAG*NVIAIG
Trigger: CCCAATGGCTATCACATTGCAACCGGCAGTGGTGAC...TTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGTCAGGAATCTCCTTATaGAGTCGGGCCTCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLSGISL*SRASSK
Trigger: CTTGGAAGAGGCCCGACTCCATAAGGAGATTCCTGA...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCAATGTGATAGCCATTaGGGGAGAAATTTATTCCAT +
Preference number: 4 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHIQCDSH*GRNLFH
Trigger: ATGGAATAAATTTCTCCCCCAATGGCTATCACATTG...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAAAGCAAGAAGTTCCCATaGATAGGCTCAAACTTGACA +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGESKKFP*IGSNLT
Trigger: TGTCAAGTTTGAGCCTATCCATGGGAACTTCTTGCT...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGACCTCTATGGACCAATaGCTAGGATTCAGAAAATGC +
Preference number: 4 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRTSMDQ*LGFRKC
Trigger: GCATTTTCTGAATCCTAGCCATTGGTCCATAGAGGT...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR TCA 90 bp GGAGACATAAATCAGAGTAATCCATATTTGAGATCATCCATTATATCCCAAACCCCTCTCCAAAAAGTGTaGTGGGTTCCCCCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GDINQSNPYLRSSIISQTPLQKV*WVPPRL
Trigger: GAGCCTTGGGGGAACCCATCACACTTTTTGGAGAGG...GGTTTGGGATATAATGGATGATCTCAAATATGGATTACTCTGATTTATGTCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR TCA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGGGCCTTCTAAGAACATaGTACAACGTCCTGTGCGTA +
Preference number: 4 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLGLLRT*YNVLCV
Trigger: TACGCACAGGACGTTGTATCATGTTCTTAGAAGGCC...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAATCAATTCTTCTCGTTTaGGGAAAACAGCTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: QSCLMLSAFQANSIGRGESILLV*GKQLLR
Trigger: TCTAAGGAGCTGTTTTCCTCAAACGAGAAGAATTGA...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTCAATTCTTCTCGTTTaGGGAAAACAGCTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRSILLV*GKQLLR
Trigger: TCTAAGGAGCTGTTTTCCTCAAACGAGAAGAATTGA...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp AACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCTTTCTAAACTCAGCCAATACTTCTaGCTGTCGCTCGCTGATATG +
Preference number: 4 (lower is better)
Translates to: NSQEKGGCTIETSCLLSKLSQYF*LSLADM
Trigger: CATATCAGCGAGCGACAGGCAGAAGTATTGGCTGAG...TTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp AACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCTTTCTAAAGACTTGTGCAGCTCTTaGATCTGGGAGGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: NSQEKGGCTIETSCLLSKDLCSS*IWEVLV
Trigger: AACAAGGACCTCCCAGATGCAAGAGCTGCACAAGTC...TTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp GGAGACATAAATCAGAGTAATCCATATTTGAGATCATCCATTATATCCCAAACCCCAAACTCGACCAAATaGATCCAGTCCCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GDINQSNPYLRSSIISQTPNSTK*IQSPSA
Trigger: GGCACTGGGGGACTGGATGCATTTGGTCGAGTTTGG...GGTTTGGGATATAATGGATGATCTCAAATATGGATTACTCTGATTTATGTCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp GGAGACATAAATCAGAGTAATCCATATTTGAGATCATCCATTATATCCCAAACCAACCATCGGCGTGGCTaGGGTCTACTGCTTCACATC +
Preference number: 4 (lower is better)
Translates to: GDINQSNPYLRSSIISQTNHRRG*GLLLHI
Trigger: GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTT...GGTTTGGGATATAATGGATGATCTCAAATATGGATTACTCTGATTTATGTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CCA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTAACGGTCATAGCAGGTaGTGCCCAGGAAACGTCCTG +
Preference number: 4 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPNGHSR*CPGNVL
Trigger: CAGGACGTTTCCTGGGCACCACCTGCTATGACCGTT...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAAGCATTGTTTAACCAATaGGTGGTGAGATGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKALFNQ*VVRCAS
Trigger: AGAGGCACATCTCACCACTCATTGGTTAAACAATGC...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTAAACGTCCTGAAGGATaGCACATTACCCGCGCCACA +
Preference number: 4 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPKRPEG*HITRAT
Trigger: TGTGGCGCGGGTAATGTGGCATCCTTCAGGACGTTT...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp AACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCTTTCTAAATGTCATACACACCCATaGTATGGCCTTCCTGATGCA +
Preference number: 4 (lower is better)
Translates to: NSQEKGGCTIETSCLLSKCHTHP*YGLPDA
Trigger: TGCATCAGGAAGGCCATAGCATGGGTGTGTATGACA...TTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAACAAGTGGCTATGAGCTaGCCATCGGAAGAAATATCT +
Preference number: 4 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKQVAMS*PSEEIS
Trigger: AGATATTTCTTCCGATGGGCAGCTCATAGCCACTTG...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTCTCATCATCCTTTTTaGTCTTTTTCAAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRSHHPF*SFSRHQ
Trigger: CTGATGCCTTGAAAAAGACCAAAAAGGATGATGAGA...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAAGGTCCAAGGAGACAGTaGATTTGGGATGGAATACAA +
Preference number: 4 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKGPRRQ*IWDGIQ
Trigger: TTGTATTCCATCCCAAATCCACTGTCTCCTTGGACC...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTGAAGGTCCTGTCATATaGGCAAGTGGCTATGAGCTG +
Preference number: 4 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPEGPVI*ASGYEL
Trigger: CAGCTCATAGCCACTTGCTCATATGACAGGACCTTC...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTCAGTTCAGAGTTGCCTaGTGCTGTCAGCATTCCAAG +
Preference number: 4 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPQFRVA*CCQHSK
Trigger: CTTGGAATGCTGACAGCATCAGGCAACTCTGAACTG...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAATGCTTTGGGGTAACATaGAGGTTGCCAAACTTCAAA +
Preference number: 4 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKCFGVT*RLPNFK
Trigger: TTTGAAGTTTGGCAACCTTCATGTTACCCCAAAGCA...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTTCCAGCTTCGATCCCTaGTTTAAGTCCGTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPSSFDP*FKSVFP
Trigger: GGGAAAGACGGACTTAAAGCAGGGATCGAAGCTGGA...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTCTGCCTGTCGCTCGCTaGTATGCTCTTCAATTTCAA +
Preference number: 4 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPLPVAR*YALQFQ
Trigger: TTGAAATTGAAGAGCATATCAGCGAGCGACAGGCAG...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTTCCTTAGAGAGAGCTTaGGGTTCAAGTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPSLERA*GSSPFP
Trigger: GGGAAAAGGACTTGAACCTCAAGCTCTCTCTAAGGA...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTATGTGCCTCTTTACCTaGGGGCTTCCAGACTATAGT +
Preference number: 4 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPMCLFT*GLPDYS
Trigger: ACTATAGTCTGGAAGCCCTCAGGTAAAGAGGCACAT...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR TCA 90 bp GGAGACATAAATCAGAGTAATCCATATTTGAGATCATCCATTATATCCCAAACCCAGAGGCTGTATAGTTaGGGTGAAAAGAGGTGCATG +
Preference number: 4 (lower is better)
Translates to: GDINQSNPYLRSSIISQTQRLYS*GEKRCM
Trigger: CATGCACCTCTTTTCACCTCAACTATACAGCCTCTG...GGTTTGGGATATAATGGATGATCTCAAATATGGATTACTCTGATTTATGTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CCA 90 bp AACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCTTTCTAAAACAATGGTTTTGCTTTaGGGTAACATGAAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: NSQEKGGCTIETSCLLSKTMVLL*GNMKVA
Trigger: GGCAACCTTCATGTTACCCCAAAGCAAAACCATTGT...TTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAAGGGATGGAATACAATTaGTCCTACATTTGTGTTATG +
Preference number: 4 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKGMEYN*SYICVM
Trigger: CATAACACAAATGTAGGAGCAATTGTATTCCATCCC...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTTGTTCAGTTCAGAGTTaGCTGATGCTGTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPCSVQS*LMLSAF
Trigger: GAATGCTGACAGCATCAGGCAACTCTGAACTGAACA...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGTCTCATCATCCTTTTTaGTCTTTTTCAAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLSHHPF*SFSRHQ
Trigger: CTGATGCCTTGAAAAAGACCAAAAAGGATGATGAGA...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTGGTCCAAGGAGACAGTaGATTTGGGATGGAATACAA +
Preference number: 4 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPGPRRQ*IWDGIQ
Trigger: TTGTATTCCATCCCAAATCCACTGTCTCCTTGGACC...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAACAATGTGATAGCCATTaGGGGAGAAATTTATTCCAT +
Preference number: 4 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKQCDSH*GRNLFH
Trigger: ATGGAATAAATTTCTCCCCCAATGGCTATCACATTG...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAACATTGTCAACCTCTCTaGAACAGCAAATTAAGTTTT +
Preference number: 4 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKHCQPL*NSKLSF
Trigger: AAAACTTAATTTGCTGTTGCAGAGAGGTTGACAATG...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR GCA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCACATTATATCCAATTaGATGCTAATTCACCAGTGT +
Preference number: 4 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLHIISN*MLIHQC
Trigger: ACACTGGTGAATTAGCATGCAATTGGATATAATGTG...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CCA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTACAATGGTTTTGCTTTaGGGTAACATGAAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPTMVLL*GNMKVA
Trigger: GGCAACCTTCATGTTACCCCAAAGCAAAACCATTGT...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR GCA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTTCTACTGAGGGTCTATaGATGGTAATTGGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPSTEGL*MVIGRK
Trigger: TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGA...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CCA 90 bp GGAGACATAAATCAGAGTAATCCATATTTGAGATCATCCATTATATCCCAAACCACAGTGGATTTGGGATaGAATACAATTGCTCCTACA +
Preference number: 4 (lower is better)
Translates to: GDINQSNPYLRSSIISQTTVDLG*NTIAPT
Trigger: TGTAGGAGCAATTGTATTCCATCCCAAATCCACTGT...GGTTTGGGATATAATGGATGATCTCAAATATGGATTACTCTGATTTATGTCTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS CCA 90 bp AGCTGCCCATCGGAAGAAATATCTAGGCCCATCACTTTGCCTTCGTaGCCAGCCAGAGTCTTCAGCGGGGACCAGCCTGGGTGCGTCCAG +
Preference number: 5 (lower is better)
Translates to: SCPSEEISRPITLPS*PARVFSGDQPGCVQ
Trigger: CTGGACGCACCCAGGCTGGTCCCCGCTGAAGACTCTGGCTGGCCACGAAGGCAAAGTGATGGGCCTAGATATTTCTTCCGATGGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS GCA 90 bp CAGGGATGGTGTAGACGCAACGCCGCTGTCGGAGGTCCCACACTTTaGAGGTGTTGTCACCACTGCCGGTTGCAATGTGATAGCCATTGG +
Preference number: 5 (lower is better)
Translates to: QGWCRRNAAVGGPTL*RCCHHCRLQCDSHW
Trigger: CCAATGGCTATCACATTGCAACCGGCAGTGGTGACAACACCTGCAAAGTGTGGGACCTCCGACAGCGGCGTTGCGTCTACACCATCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CCA 90 bp CACTTTGCCTTCGTGGCCAGCCAGAGTCTTCAGCGGGGACCAGCCTaGGTGCGTCCAGATCTTGGCTGTGTTATCATAGGCACCAGTAAG +
Preference number: 5 (lower is better)
Translates to: HFAFVASQSLQRGPA*VRPDLGCVIIGTSK
Trigger: CTTACTGGTGCCTATGATAACACAGCCAAGATCTGGACGCACCCAGGCTGGTCCCCGCTGAAGACTCTGGCTGGCCACGAAGGCAAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCATCCCAGACTCTCCTTaGGCCAGACGCTCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLIPDSP*ARRSLS
Trigger: GGAGAGGGAGCGTCTGGCCAAAGGAGAGTCTGGGAT...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGTTGCAGAGACGGCATTaGCCATGTTGCCCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGLQRRH*PCCPGS
Trigger: CGAGCCTGGGCAACATGGCAAATGCCGTCTCTGCAA...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp TGTGGTGAGCTGTGTTCGCACTACTGCACTCCAATCTCGGCGACAAAGCGAGACCACACTTTGCAGGTGTaGTCACCACTGCCGGTTGCA +
Preference number: 5 (lower is better)
Translates to: CGELCSHYCTPISATKRDHTLQV*SPLPVA
Trigger: TGCAACCGGCAGTGGTGACAACACCTGCAAAGTGTG...GTCTCGCTTTGTCGCCGAGATTGGAGTGCAGTAGTGCGAACACAGCTCACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CAA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGCGGAGGTCCCACACTTaGCAGGTGTTGTCACCACTG +
Preference number: 5 (lower is better)
Translates to: WLRSTASHPILQGKEKCSRRSHT*QVLSPL
Trigger: CAGTGGTGACAACACCTGCAAAGTGTGGGACCTCCG...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGTCTAGGCCCATCACTTaGCCTTCGTGGCCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: WLRSTASHPILQGKEKCSSRPIT*PSWPAR
Trigger: TCTGGCTGGCCACGAAGGCAAAGTGATGGGCCTAGA...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCATGAGCCCAGAAATTaGAGACCGGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVHEPRN*RPAWAT
Trigger: TGTTGCCCAGGCCGGTCTCAAATTTCTGGGCTCATG...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CAA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGAAAGACCGGAGAGACTaGTGCAGCTCTTGCATCTGG +
Preference number: 5 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVKDRRD*CSSCIW
Trigger: CCAGATGCAAGAGCTGCACAAGTCTCTCCGGTCTTT...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGTGTCACCACTGCCGGTaGCAATGTGATAGCCATTGG +
Preference number: 5 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGCHHCR*QCDSHW
Trigger: CCAATGGCTATCACATTGCAACCGGCAGTGGTGACA...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGTGTCACCACTGCCGGTaGCAATGTGATAGCCATTGG +
Preference number: 5 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVCHHCR*QCDSHW
Trigger: CCAATGGCTATCACATTGCAACCGGCAGTGGTGACA...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CCA 90 bp AGCTCTTGCATCTGGGAGGTCCTTGTTGTCTCAGGAATCTCCTTATaGAGTCGGGCCTCTTCCAAGCGTTTCATTGCCCTGGGCAACGAA +
Preference number: 5 (lower is better)
Translates to: SSCIWEVLVVSGISL*SRASSKRFIALGNE
Trigger: TTCGTTGCCCAGGGCAATGAAACGCTTGGAAGAGGCCCGACTCCATAAGGAGATTCCTGAGACAACAAGGACCTCCCAGATGCAAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGTCATCTGTGGAAACATaGATCTGCCGGGCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: WLRSTASHPILQGKEKCSSSVET*ICRARF
Trigger: GAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGA...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp TGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGGGAACAGACCAGAGCTaGCAAAGCCCACTCCAACAA +
Preference number: 5 (lower is better)
Translates to: WLRSTASHPILQGKEKCSGTDQS*QSPLQQ
Trigger: TTGTTGGAGTGGGCTTTGCAAGCTCTGGTCTGTTCC...CGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCGCACAAGAGGCCAGGTaGACATCTTTTGGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLAQEAR*TSFGSK
Trigger: CTTGGACCCAAAAGATGTCAACCTGGCCTCTTGTGC...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCGGAGGTCCCACACTTaGCAGGTGTTGTCACCACTG +
Preference number: 5 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHIRRSHT*QVLSPL
Trigger: CAGTGGTGACAACACCTGCAAAGTGTGGGACCTCCG...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS TCA 90 bp AAGTGTGATGGGTTCCCCCAAGGCTCTAAGGCAAGCTTTGACCTCTaGGTCATCTGTGGAAACATTGATCTGCCGGGCTCGCTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: KCDGFPQGSKASFDL*VICGNIDLPGSLPS
Trigger: AGAAGGAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAAGCTTGCCTTAGAGCCTTGGGGGAACCCATCACACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CCA 90 bp AAACGTCCTGAAGGATGCCACATTACCCGCGCCACACGCACTGTATaGCCTTCAATATCTGCCACTGGTTCATCACTGTCGAGACTCCAA +
Preference number: 5 (lower is better)
Translates to: KRPEGCHITRATRTV*PSISATGSSLSRLQ
Trigger: TTGGAGTCTCGACAGTGATGAACCAGTGGCAGATATTGAAGGCCATACAGTGCGTGTGGCGCGGGTAATGTGGCATCCTTCAGGACGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAAATCCCAGACTCTCCTTaGGCCAGACGCTCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: QSCLMLSAFQANSIGRGEIPDSP*ARRSLS
Trigger: GGAGAGGGAGCGTCTGGCCAAAGGAGAGTCTGGGAT...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp CAGGGTCCACAGAATAGAGCTGACCAAAGCCATTGTCAACCTCTCTGCAACAGCGCATCTGGGAGGTCCTaGTTGTCTCAGGAATCTCCT +
Preference number: 5 (lower is better)
Translates to: QGPQNRADQSHCQPLCNSASGRS*LSQESP
Trigger: AGGAGATTCCTGAGACAACAAGGACCTCCCAGATGC...GCTGTTGCAGAGAGGTTGACAATGGCTTTGGTCAGCTCTATTCTGTGGACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CAA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCTCAGCCATCCACAGCTaGAAGGTCCTGTCATATGAG +
Preference number: 5 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLSAIHS*KVLSYE
Trigger: CTCATATGACAGGACCTTCAAGCTGTGGATGGCTGA...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS TCA 90 bp GACTCCAAAGCTTCACAGAGCCATCAGCCGCACAAGAGGCCAGGTTaGCATCTTTTGGGTCCAAGGAGACAGTGGATTTGGGATGGAATA +
Preference number: 5 (lower is better)
Translates to: DSKASQSHQPHKRPG*HLLGPRRQWIWDGI
Trigger: TATTCCATCCCAAATCCACTGTCTCCTTGGACCCAAAAGATGTCAACCTGGCCTCTTGTGCGGCTGATGGCTCTGTGAAGCTTTGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CCA 90 bp CTTCACAGAGCCATCAGCCGCACAAGAGGCCAGGTTGACATCTTTTaGGTCCAAGGAGACAGTGGATTTGGGATGGAATACAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: LHRAISRTRGQVDIF*VQGDSGFGMEYNCS
Trigger: GGAGCAATTGTATTCCATCCCAAATCCACTGTCTCCTTGGACCCAAAAGATGTCAACCTGGCCTCTTGTGCGGCTGATGGCTCTGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCCTTCCAAGCGTTTCATaGCCCTGGGCAACGAATAAT +
Preference number: 5 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLLPSVS*PWATNN
Trigger: ATTATTCGTTGCCCAGGGCAATGAAACGCTTGGAAG...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCTCTGGGAGGTCCTTGTaGTCTCAGGAATCTCCTTAT +
Preference number: 5 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLSGRSL*SQESPY
Trigger: ATAAGGAGATTCCTGAGACAACAAGGACCTCCCAGA...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGCAATTGCTCCTACATTaGTGTTATGCCCTCGAAGAG +
Preference number: 5 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGQLLLH*CYALEE
Trigger: CTCTTCGAGGGCATAACACAAATGTAGGAGCAATTG...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAGCCAAAGAGCCATCTaGATGGAAGGCAATGTCATA +
Preference number: 5 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGSQRAI*MEGNVI
Trigger: TATGACATTGCCTTCCATCAAGATGGCTCTTTGGCT...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGTGGATAGGCTCAAACTaGACACCAGTCACTAAGTTC +
Preference number: 5 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVWIGSN*TPVTKF
Trigger: GAACTTAGTGACTGGTGTCAAGTTTGAGCCTATCCA...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp TGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGTATAGTTCAGCCACCTaGCTCTCTGGGTCATATGTA +
Preference number: 5 (lower is better)
Translates to: CITIGVAAVYCFTSHSPGYSSAT*LSGSYV
Trigger: TACATATGACCCAGAGAGCAAGGTGGCTGAACTATA...CCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp TGTGGTGAGCTGTGTTCGCACTACTGCACTCCAATCTCGGCGACAAAGCGAGACCCTGACACAATGGTTTaGCTTTGGGGTAACATGAAG +
Preference number: 5 (lower is better)
Translates to: CGELCSHYCTPISATKRDPDTMV*LWGNMK
Trigger: CTTCATGTTACCCCAAAGCAAAACCATTGTGTCAGG...GTCTCGCTTTGTCGCCGAGATTGGAGTGCAGTAGTGCGAACACAGCTCACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS GCA 90 bp GATCTGCCGGGCTCGCTTCCTTCTCTCAAACTCAGCCAATACTTCTaGCTGTCGCTCGCTGATATGCTCTTCAATTTCAAACACTTCTCC +
Preference number: 5 (lower is better)
Translates to: DLPGSLPSLKLSQYF*LSLADMLFNFKHFS
Trigger: GGAGAAGTGTTTGAAATTGAAGAGCATATCAGCGAGCGACAGGCAGAAGTATTGGCTGAGTTTGAGAGAAGGAAGCGAGCCCGGCAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS GCA 90 bp CTAAGGCAAGCTTTGACCTCTGAGTCATCTGTGGAAACATTGATCTaGCGGGCTCGCTTCCTTCTCTCAAACTCAGCCAATACTTCTGCC +
Preference number: 5 (lower is better)
Translates to: LRQALTSESSVETLI*RARFLLSNSANTSA
Trigger: GGCAGAAGTATTGGCTGAGTTTGAGAGAAGGAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAAGCTTGCCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS GCA 90 bp CAGCCAAAGAGCCATCTTGATGGAAGGCAATGTCATACACACCCATaGTATGGCCTTCCTGATGCAGGATCTCCTCTTGAGCCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: QPKSHLDGRQCHTHP*YGLPDAGSPLEPPN
Trigger: ATTTGGAGGCTCAAGAGGAGATCCTGCATCAGGAAGGCCATAGCATGGGTGTGTATGACATTGCCTTCCATCAAGATGGCTCTTTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS GCA 90 bp ATCCACAGCTTGAAGGTCCTGTCATATGAGCAAGTGGCTATGAGCTaGCCATCGGAAGAAATATCTAGGCCCATCACTTTGCCTTCGTGG +
Preference number: 5 (lower is better)
Translates to: IHSLKVLSYEQVAMS*PSEEISRPITLPSW
Trigger: CCACGAAGGCAAAGTGATGGGCCTAGATATTTCTTCCGATGGGCAGCTCATAGCCACTTGCTCATATGACAGGACCTTCAAGCTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp GTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGCTCCAATTGCTCCTACATTaGTGTTATGCCCTCGAAGAG +
Preference number: 5 (lower is better)
Translates to: VAAVYCFTSHSPGKGKVLQLLLH*CYALEE
Trigger: CTCTTCGAGGGCATAACACAAATGTAGGAGCAATTG...GAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp TGTGGTGAGCTGTGTTCGCACTACTGCACTCCAATCTCGGCGACAAAGCGAGACAAGGAGACAGTGGATTaGGGATGGAATACAATTGCT +
Preference number: 5 (lower is better)
Translates to: CGELCSHYCTPISATKRDKETVD*GWNTIA
Trigger: AGCAATTGTATTCCATCCCAAATCCACTGTCTCCTT...GTCTCGCTTTGTCGCCGAGATTGGAGTGCAGTAGTGCGAACACAGCTCACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CAA 90 bp ATTGTAATTGAGTCCAGGCCTGGCTTACTGGCAGTCTGGCCCAAAATGCAAACAGAGGCCAAGGCAGGATaGCATGAGCCCAGAAATTTG +
Preference number: 5 (lower is better)
Translates to: IVIESRPGLLAVWPKMQTEAKAG*HEPRNL
Trigger: CAAATTTCTGGGCTCATGCAATCCTGCCTTGGCCTC...TGTTTGCATTTTGGGCCAGACTGCCAGTAAGCCAGGCCTGGACTCAATTACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS CCA 90 bp CAAAAATTATTCAAAGACCGGAGAGACTTGTGCAGCTCTTGCATCTaGGAGGTCCTTGTTGTCTCAGGAATCTCCTTATGGAGTCGGGCC +
Preference number: 5 (lower is better)
Translates to: QKLFKDRRDLCSSCI*EVLVVSGISLWSRA
Trigger: GGCCCGACTCCATAAGGAGATTCCTGAGACAACAAGGACCTCCCAGATGCAAGAGCTGCACAAGTCTCTCCGGTCTTTGAATAATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTCATCTGTGGAAACATaGATCTGCCGGGCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRSSVET*ICRARF
Trigger: GAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGA...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp GGCGTGGCTGCGGTCTACTGCTTCACATCCCATTCTCCAGGGAAAGGAAAAGTGTTCATGATACCAGGTTaGCTGATACTCTTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: GVAAVYCFTSHSPGKGKVFMIPG*LILFFG
Trigger: TCCAAAGAAGAGTATCAGCAAACCTGGTATCATGAA...CACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGGGAACAGACCAGAGCTaGCAAAGCCCACTCCAACAA +
Preference number: 5 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRGTDQS*QSPLQQ
Trigger: TTGTTGGAGTGGGCTTTGCAAGCTCTGGTCTGTTCC...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp CAGGGTCCACAGAATAGAGCTGACCAAAGCCATTGTCAACCTCTCTGCAACAGCTGGATAGGCTCAAACTaGACACCAGTCACTAAGTTC +
Preference number: 5 (lower is better)
Translates to: QGPQNRADQSHCQPLCNSWIGSN*TPVTKF
Trigger: GAACTTAGTGACTGGTGTCAAGTTTGAGCCTATCCA...GCTGTTGCAGAGAGGTTGACAATGGCTTTGGTCAGCTCTATTCTGTGGACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CAA 90 bp TGTGGTGAGCTGTGTTCGCACTACTGCACTCCAATCTCGGCGACAAAGCGAGACGCACATTATATCCAATaGCATGCTAATTCACCAGTG +
Preference number: 5 (lower is better)
Translates to: CGELCSHYCTPISATKRDAHYIQ*HANSPV
Trigger: CACTGGTGAATTAGCATGCAATTGGATATAATGTGC...GTCTCGCTTTGTCGCCGAGATTGGAGTGCAGTAGTGCGAACACAGCTCACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CAA 90 bp CAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGTGAATCAGCCATCCACAGCTaGAAGGTCCTGTCATATGAG +
Preference number: 5 (lower is better)
Translates to: QSCLMLSAFQANSIGRGESAIHS*KVLSYE
Trigger: CTCATATGACAGGACCTTCAAGCTGTGGATGGCTGA...TTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCCCAAGAGAAAGGAGGTaGTACAATAGAGACGTCATG +
Preference number: 5 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHIPRERR*YNRDVM
Trigger: CATGACGTCTCTATTGTACAACCTCCTTTCTCTTGG...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp AAGTCTTCTTCACTGTATAACCATCGGCGTGGCTGCGGTCTACTGCTTCACATCAAGGAGACAGTGGATTaGGGATGGAATACAATTGCT +
Preference number: 5 (lower is better)
Translates to: KSSSLYNHRRGCGLLLHIKETVD*GWNTIA
Trigger: AGCAATTGTATTCCATCCCAAATCCACTGTCTCCTT...GATGTGAAGCAGTAGACCGCAGCCACGCCGATGGTTATACAGTGAAGAAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCACACTTTGCAGGTGTaGTCACCACTGCCGGTTGCA +
Preference number: 5 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLHTLQV*SPLPVA
Trigger: TGCAACCGGCAGTGGTGACAACACCTGCAAAGTGTG...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp ATTGTAATTGAGTCCAGGCCTGGCTTACTGGCAGTCTGGCCCAAAATGCAAACACAAGTCCTTTTCCCATaGTCATCTATTCAGCCATCC +
Preference number: 5 (lower is better)
Translates to: IVIESRPGLLAVWPKMQTQVLFP*SSIQPS
Trigger: GGATGGCTGAATAGATGACAATGGGAAAAGGACTTG...TGTTTGCATTTTGGGCCAGACTGCCAGTAAGCCAGGCCTGGACTCAATTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CAA 90 bp ATTGTAATTGAGTCCAGGCCTGGCTTACTGGCAGTCTGGCCCAAAATGCAAACAATGTTCAGTTCAGAGTaGCCTGATGCTGTCAGCATT +
Preference number: 5 (lower is better)
Translates to: IVIESRPGLLAVWPKMQTMFSSE*PDAVSI
Trigger: AATGCTGACAGCATCAGGCAACTCTGAACTGAACAT...TGTTTGCATTTTGGGCCAGACTGCCAGTAAGCCAGGCCTGGACTCAATTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CAA 90 bp AGTTCAGAGTTGCCTGATGCTGTCAGCATTCCAAGCAAACTCAATAGGAAGAGGAGCCAAAGAGCCATCTaGATGGAAGGCAATGTCATA +
Preference number: 5 (lower is better)
Translates to: SSELPDAVSIPSKLNRKRSQRAI*MEGNVI
Trigger: TATGACATTGCCTTCCATCAAGATGGCTCTTTGGCT...CCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGTCGGGTGCTTTAGTTTaGGTTGCCGTGGAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLSGALV*VAVEEA
Trigger: AGCCTCTTCCACGGCAACCAAAACTAAAGCACCCGA...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374198.5
CDS GCA 90 bp ATCTTTTGGGTCCAAGGAGACAGTGGATTTGGGATGGAATACAATTaGTCCTACATTTGTGTTATGCCCTCGAAGAGTGTGAAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: IFWVQGDSGFGMEYN*SYICVMPSKSVKEV
Trigger: AACCTCCTTCACACTCTTCGAGGGCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAATCCACTGTCTCCTTGGACCCAAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp AACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCTTTCTAAAGCATCTGGGAGGTCCTaGTTGTCTCAGGAATCTCCT +
Preference number: 5 (lower is better)
Translates to: NSQEKGGCTIETSCLLSKASGRS*LSQESP
Trigger: AGGAGATTCCTGAGACAACAAGGACCTCCCAGATGC...TTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp GGAGACATAAATCAGAGTAATCCATATTTGAGATCATCCATTATATCCCAAACCTCTAGGCCCATCACTTaGCCTTCGTGGCCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: GDINQSNPYLRSSIISQTSRPIT*PSWPAR
Trigger: TCTGGCTGGCCACGAAGGCAAAGTGATGGGCCTAGA...GGTTTGGGATATAATGGATGATCTCAAATATGGATTACTCTGATTTATGTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS GCA 90 bp AAACACTTCTCCAGAGGTTATATTAATATTTCCAGCTTCGATCCCTaGTTTAAGTCCGTCTTTCCCCAAAATCCCAGACTCTCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: KHFSRGYINISSFDP*FKSVFPQNPRLSFG
Trigger: GCCAAAGGAGAGTCTGGGATTTTGGGGAAAGACGGACTTAAAGCAGGGATCGAAGCTGGAAATATTAATATAACCTCTGGAGAAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCCACCTTCAAGCTATTaGGTCCTTCATGATACCAGG +
Preference number: 5 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLPPSSY*VLHDTR
Trigger: CCTGGTATCATGAAGGACCAAATAGCTTGAAGGTGG...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAATCTGGGAGGTCCTTGTaGTCTCAGGAATCTCCTTAT +
Preference number: 5 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKSGRSL*SQESPY
Trigger: ATAAGGAGATTCCTGAGACAACAAGGACCTCCCAGA...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp GTTACACAGGATGAGGGGATGAGGCAGGAGAATCATTTGAGCACAGGAAGTCAATGGGATGGAATACAATaGCTCCTACATTTGTGTTAT +
Preference number: 5 (lower is better)
Translates to: VTQDEGMRQENHLSTGSQWDGIQ*LLHLCY
Trigger: ATAACACAAATGTAGGAGCAATTGTATTCCATCCCA...TTGACTTCCTGTGCTCAAATGATTCTCCTGCCTCATCCCCTCATCCTGTGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CAA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTTACAACGGTGTGATCTaGGCTCACTGCAACCTCCGC +
Preference number: 5 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPYNGVI*AHCNLR
Trigger: GCGGAGGTTGCAGTGAGCCAAGATCACACCGTTGTA...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CAA 90 bp AACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCTTTCTAAACCACCTTCAAGCTATTaGGTCCTTCATGATACCAGG +
Preference number: 5 (lower is better)
Translates to: NSQEKGGCTIETSCLLSKPPSSY*VLHDTR
Trigger: CCTGGTATCATGAAGGACCAAATAGCTTGAAGGTGG...TTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp AACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCTTTCTAAACTTCCAAGCGTTTCATaGCCCTGGGCAACGAATAAT +
Preference number: 5 (lower is better)
Translates to: NSQEKGGCTIETSCLLSKLPSVS*PWATNN
Trigger: ATTATTCGTTGCCCAGGGCAATGAAACGCTTGGAAG...TTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp GGAGACATAAATCAGAGTAATCCATATTTGAGATCATCCATTATATCCCAAACCAAAGACCGGAGAGACTaGTGCAGCTCTTGCATCTGG +
Preference number: 5 (lower is better)
Translates to: GDINQSNPYLRSSIISQTKDRRD*CSSCIW
Trigger: CCAGATGCAAGAGCTGCACAAGTCTCTCCGGTCTTT...GGTTTGGGATATAATGGATGATCTCAAATATGGATTACTCTGATTTATGTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS-3UTR CAA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTGCACAAGAGGCCAGGTaGACATCTTTTGGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPAQEAR*TSFGSK
Trigger: CTTGGACCCAAAAGATGTCAACCTGGCCTCTTGTGC...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAACAAGTCCTTTTCCCATaGTCATCTATTCAGCCATCC +
Preference number: 5 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKQVLFP*SSIQPS
Trigger: GGATGGCTGAATAGATGACAATGGGAAAAGGACTTG...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp CTGACATGGAAATCCAATTCTACTGAGGGTCTATGCATGGTAATTGGCAGAAAATATAGTTCAGCCACCTaGCTCTCTGGGTCATATGTA +
Preference number: 5 (lower is better)
Translates to: LTWKSNSTEGLCMVIGRKYSSAT*LSGSYV
Trigger: TACATATGACCCAGAGAGCAAGGTGGCTGAACTATA...TTTTCTGCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp CATCCTTTAAACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCCTGACACAATGGTTTaGCTTTGGGGTAACATGAAG +
Preference number: 5 (lower is better)
Translates to: HPLNSQEKGGCTIETSCLPDTMV*LWGNMK
Trigger: CTTCATGTTACCCCAAAGCAAAACCATTGTGTCAGG...CAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTTTAAAGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS TCA 90 bp AGAAATTTATTCCATAGATTTCTTTCAGGTGGCCTTCTAAGAACATaGTACAACGTCCTGTGCGTAGGTCCCAAACTCGACCAAATGCAT +
Preference number: 5 (lower is better)
Translates to: RNLFHRFLSGGLLRT*YNVLCVGPKLDQMH
Trigger: ATGCATTTGGTCGAGTTTGGGACCTACGCACAGGACGTTGTATCATGTTCTTAGAAGGCCACCTGAAAGAAATCTATGGAATAAATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS GCA 90 bp CTTCTCTCAAACTCAGCCAATACTTCTGCCTGTCGCTCGCTGATATaGTCTTCAATTTCAAACACTTCTCCAGAGGTTATATTAATATTT +
Preference number: 5 (lower is better)
Translates to: LLSNSANTSACRSLI*SSISNTSPEVILIF
Trigger: AAATATTAATATAACCTCTGGAGAAGTGTTTGAAATTGAAGAGCATATCAGCGAGCGACAGGCAGAAGTATTGGCTGAGTTTGAGAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp AAACATGATAGAACTAAACACTTCAATTCTTCTCGTTTGAGGAAAACAGCTCCTCCAAGAGAAAGGAGGTaGTACAATAGAGACGTCATG +
Preference number: 5 (lower is better)
Translates to: KHDRTKHFNSSRLRKTAPPRERR*YNRDVM
Trigger: CATGACGTCTCTATTGTACAACCTCCTTTCTCTTGG...AGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp AACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCTTTCTAAATTCTCATCATCCTTTTaGGTCTTTTTCAAGGCATCA +
Preference number: 5 (lower is better)
Translates to: NSQEKGGCTIETSCLLSKFSSSF*VFFKAS
Trigger: TGATGCCTTGAAAAAGACCAAAAAGGATGATGAGAA...TTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp AACAGCCAAGAGAAAGGAGGTTGTACAATAGAGACGTCATGTTTGCTTTCTAAATGGGATGGAATACAATaGCTCCTACATTTGTGTTAT +
Preference number: 5 (lower is better)
Translates to: NSQEKGGCTIETSCLLSKWDGIQ*LLHLCY
Trigger: ATAACACAAATGTAGGAGCAATTGTATTCCATCCCA...TTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTCTCTTGGCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS-3UTR CAA 90 bp GGAGACATAAATCAGAGTAATCCATATTTGAGATCATCCATTATATCCCAAACCTTCATGATACCAGGTTaGCTGATACTCTTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: GDINQSNPYLRSSIISQTFMIPG*LILFFG
Trigger: TCCAAAGAAGAGTATCAGCAAACCTGGTATCATGAA...GGTTTGGGATATAATGGATGATCTCAAATATGGATTACTCTGATTTATGTCTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374199.9
CDS CCA 72 bp TTCGTGGCCAGCCAGAGTCTTCAGCGGGGACCAGCCTaGGTGCGTCCAGATCTTGGCTGTGTTATCATAGGC +
Preference number: 6 (lower is better)
Translates to: FVASQSLQRGPA*VRPDLGCVIIG
Trigger: GCCTATGATAACACAGCCAAGATCTGGACGCACCCAGGCTGGTCCCCGCTGAAGACTCTGGCTGGCCACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 90 bp GTGGCTATGAGCTGCCCATCGGAAGAAATATCTAGGCCCATCACTTaGCCTTCGTGGCCAGCCAGAGTCTTCAGCGGGGACCAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: VAMSCPSEEISRPIT*PSWPARVFSGDQPG
Trigger: CCCAGGCTGGTCCCCGCTGAAGACTCTGGCTGGCCACGAAGGCAAAGTGATGGGCCTAGATATTTCTTCCGATGGGCAGCTCATAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS GCA 72 bp GCTGCCCATCGGAAGAAATATCTAGGCCCATCACTTTaGCTTCGTGGCCAGCCAGAGTCTTCAGCGGGGACC +
Preference number: 6 (lower is better)
Translates to: AAHRKKYLGPSL*LRGQPESSAGT
Trigger: GGTCCCCGCTGAAGACTCTGGCTGGCCACGAAGGCAAAGTGATGGGCCTAGATATTTCTTCCGATGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CCA 72 bp TCGGAAGAAATATCTAGGCCCATCACTTTGCCTTCGTaGCCAGCCAGAGTCTTCAGCGGGGACCAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: SEEISRPITLPS*PARVFSGDQPG
Trigger: CCCAGGCTGGTCCCCGCTGAAGACTCTGGCTGGCCACGAAGGCAAAGTGATGGGCCTAGATATTTCTTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 72 bp AGCTGCCCATCGGAAGAAATATCTAGGCCCATCACTTaGCCTTCGTGGCCAGCCAGAGTCTTCAGCGGGGAC +
Preference number: 6 (lower is better)
Translates to: SCPSEEISRPIT*PSWPARVFSGD
Trigger: GTCCCCGCTGAAGACTCTGGCTGGCCACGAAGGCAAAGTGATGGGCCTAGATATTTCTTCCGATGGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS TCA 72 bp GGGTTCCCCCAAGGCTCTAAGGCAAGCTTTGACCTCTaGGTCATCTGTGGAAACATTGATCTGCCGGGCTCG +
Preference number: 6 (lower is better)
Translates to: GFPQGSKASFDL*VICGNIDLPGS
Trigger: CGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAAGCTTGCCTTAGAGCCTTGGGGGAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS TCA 72 bp GCTTCACAGAGCCATCAGCCGCACAAGAGGCCAGGTTaGCATCTTTTGGGTCCAAGGAGACAGTGGATTTGG +
Preference number: 6 (lower is better)
Translates to: ASQSHQPHKRPG*HLLGPRRQWIW
Trigger: CCAAATCCACTGTCTCCTTGGACCCAAAAGATGTCAACCTGGCCTCTTGTGCGGCTGATGGCTCTGTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CCA 72 bp GAAGGATGCCACATTACCCGCGCCACACGCACTGTATaGCCTTCAATATCTGCCACTGGTTCATCACTGTCG +
Preference number: 6 (lower is better)
Translates to: EGCHITRATRTV*PSISATGSSLS
Trigger: CGACAGTGATGAACCAGTGGCAGATATTGAAGGCCATACAGTGCGTGTGGCGCGGGTAATGTGGCATCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 72 bp GGAGAGACTTGTGCAGCTCTTGCATCTGGGAGGTCCTaGTTGTCTCAGGAATCTCCTTATGGAGTCGGGCCT +
Preference number: 6 (lower is better)
Translates to: GETCAALASGRS*LSQESPYGVGP
Trigger: AGGCCCGACTCCATAAGGAGATTCCTGAGACAACAAGGACCTCCCAGATGCAAGAGCTGCACAAGTCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 90 bp AAGACCGGAGAGACTTGTGCAGCTCTTGCATCTGGGAGGTCCTTGTaGTCTCAGGAATCTCCTTATGGAGTCGGGCCTCTTCCAAGCGTT +
Preference number: 6 (lower is better)
Translates to: KTGETCAALASGRSL*SQESPYGVGPLPSV
Trigger: AACGCTTGGAAGAGGCCCGACTCCATAAGGAGATTCCTGAGACAACAAGGACCTCCCAGATGCAAGAGCTGCACAAGTCTCTCCGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 90 bp TCAAAGACCGGAGAGACTTGTGCAGCTCTTGCATCTGGGAGGTCCTaGTTGTCTCAGGAATCTCCTTATGGAGTCGGGCCTCTTCCAAGC +
Preference number: 6 (lower is better)
Translates to: SKTGETCAALASGRS*LSQESPYGVGPLPS
Trigger: GCTTGGAAGAGGCCCGACTCCATAAGGAGATTCCTGAGACAACAAGGACCTCCCAGATGCAAGAGCTGCACAAGTCTCTCCGGTCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS GCA 72 bp TACCCGCGCCACACGCACTGTATGGCCTTCAATATCTaGCACTGGTTCATCACTGTCGAGACTCCAAAGCTT +
Preference number: 6 (lower is better)
Translates to: YPRHTHCMAFNI*HWFITVETPKL
Trigger: AAGCTTTGGAGTCTCGACAGTGATGAACCAGTGGCAGATATTGAAGGCCATACAGTGCGTGTGGCGCGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CCA 72 bp ATCTGGGAGGTCCTTGTTGTCTCAGGAATCTCCTTATaGAGTCGGGCCTCTTCCAAGCGTTTCATTGCCCTG +
Preference number: 6 (lower is better)
Translates to: IWEVLVVSGISL*SRASSKRFIAL
Trigger: CAGGGCAATGAAACGCTTGGAAGAGGCCCGACTCCATAAGGAGATTCCTGAGACAACAAGGACCTCCCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CCA 72 bp GCCATCAGCCGCACAAGAGGCCAGGTTGACATCTTTTaGGTCCAAGGAGACAGTGGATTTGGGATGGAATAC +
Preference number: 6 (lower is better)
Translates to: AISRTRGQVDIF*VQGDSGFGMEY
Trigger: GTATTCCATCCCAAATCCACTGTCTCCTTGGACCCAAAAGATGTCAACCTGGCCTCTTGTGCGGCTGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 72 bp GAGACTTGTGCAGCTCTTGCATCTGGGAGGTCCTTGTaGTCTCAGGAATCTCCTTATGGAGTCGGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: ETCAALASGRSL*SQESPYGVGPL
Trigger: AAGAGGCCCGACTCCATAAGGAGATTCCTGAGACAACAAGGACCTCCCAGATGCAAGAGCTGCACAAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 72 bp AGCTTCACAGAGCCATCAGCCGCACAAGAGGCCAGGTaGACATCTTTTGGGTCCAAGGAGACAGTGGATTTG +
Preference number: 6 (lower is better)
Translates to: SFTEPSAAQEAR*TSFGSKETVDL
Trigger: CAAATCCACTGTCTCCTTGGACCCAAAAGATGTCAACCTGGCCTCTTGTGCGGCTGATGGCTCTGTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 90 bp TCTCCAAAAAGTGTGATGGGTTCCCCCAAGGCTCTAAGGCAAGCTTaGACCTCTGAGTCATCTGTGGAAACATTGATCTGCCGGGCTCGC +
Preference number: 6 (lower is better)
Translates to: SPKSVMGSPKALRQA*TSESSVETLICRAR
Trigger: GCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAAGCTTGCCTTAGAGCCTTGGGGGAACCCATCACACTTTTTGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 90 bp AGACTCCAAAGCTTCACAGAGCCATCAGCCGCACAAGAGGCCAGGTaGACATCTTTTGGGTCCAAGGAGACAGTGGATTTGGGATGGAAT +
Preference number: 6 (lower is better)
Translates to: RLQSFTEPSAAQEAR*TSFGSKETVDLGWN
Trigger: ATTCCATCCCAAATCCACTGTCTCCTTGGACCCAAAAGATGTCAACCTGGCCTCTTGTGCGGCTGATGGCTCTGTGAAGCTTTGGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS GCA 72 bp GCTTTGACCTCTGAGTCATCTGTGGAAACATTGATCTaGCGGGCTCGCTTCCTTCTCTCAAACTCAGCCAAT +
Preference number: 6 (lower is better)
Translates to: ALTSESSVETLI*RARFLLSNSAN
Trigger: ATTGGCTGAGTTTGAGAGAAGGAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS GCA 72 bp AGCCATCTTGATGGAAGGCAATGTCATACACACCCATaGTATGGCCTTCCTGATGCAGGATCTCCTCTTGAG +
Preference number: 6 (lower is better)
Translates to: SHLDGRQCHTHP*YGLPDAGSPLE
Trigger: CTCAAGAGGAGATCCTGCATCAGGAAGGCCATAGCATGGGTGTGTATGACATTGCCTTCCATCAAGATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CCA 72 bp TTCAAAGACCGGAGAGACTTGTGCAGCTCTTGCATCTaGGAGGTCCTTGTTGTCTCAGGAATCTCCTTATGG +
Preference number: 6 (lower is better)
Translates to: FKDRRDLCSSCI*EVLVVSGISLW
Trigger: CCATAAGGAGATTCCTGAGACAACAAGGACCTCCCAGATGCAAGAGCTGCACAAGTCTCTCCGGTCTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 72 bp TTAAGTCCGTCTTTCCCCAAAATCCCAGACTCTCCTTaGGCCAGACGCTCCCTCTCCTTCTCTTCCAAACTT +
Preference number: 6 (lower is better)
Translates to: LSPSFPKIPDSP*ARRSLSFSSKL
Trigger: AAGTTTGGAAGAGAAGGAGAGGGAGCGTCTGGCCAAAGGAGAGTCTGGGATTTTGGGGAAAGACGGACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 72 bp AGGCAAGCTTTGACCTCTGAGTCATCTGTGGAAACATaGATCTGCCGGGCTCGCTTCCTTCTCTCAAACTCA +
Preference number: 6 (lower is better)
Translates to: RQALTSESSVET*ICRARFLLSNS
Trigger: TGAGTTTGAGAGAAGGAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAAGCTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 72 bp AGTGTGATGGGTTCCCCCAAGGCTCTAAGGCAAGCTTaGACCTCTGAGTCATCTGTGGAAACATTGATCTGC +
Preference number: 6 (lower is better)
Translates to: SVMGSPKALRQA*TSESSVETLIC
Trigger: GCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAAGCTTGCCTTAGAGCCTTGGGGGAACCCATCACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 72 bp GGTCCCACACTTTGCAGGTGTTGTCACCACTGCCGGTaGCAATGTGATAGCCATTGGGGGAGAAATTTATTC +
Preference number: 6 (lower is better)
Translates to: GPTLCRCCHHCR*QCDSHWGRNLF
Trigger: GAATAAATTTCTCCCCCAATGGCTATCACATTGCAACCGGCAGTGGTGACAACACCTGCAAAGTGTGGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 90 bp AAGGCTCTAAGGCAAGCTTTGACCTCTGAGTCATCTGTGGAAACATaGATCTGCCGGGCTCGCTTCCTTCTCTCAAACTCAGCCAATACT +
Preference number: 6 (lower is better)
Translates to: KALRQALTSESSVET*ICRARFLLSNSANT
Trigger: AGTATTGGCTGAGTTTGAGAGAAGGAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAAGCTTGCCTTAGAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS TCA 72 bp CTATTCAGCCATCCACAGCTTGAAGGTCCTGTCATATaGGCAAGTGGCTATGAGCTGCCCATCGGAAGAAAT +
Preference number: 6 (lower is better)
Translates to: LFSHPQLEGPVI*ASGYELPIGRN
Trigger: ATTTCTTCCGATGGGCAGCTCATAGCCACTTGCTCATATGACAGGACCTTCAAGCTGTGGATGGCTGAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS GCA 72 bp AAATTATTCAAAGACCGGAGAGACTTGTGCAGCTCTTaGATCTGGGAGGTCCTTGTTGTCTCAGGAATCTCC +
Preference number: 6 (lower is better)
Translates to: KLFKDRRDLCSS*IWEVLVVSGIS
Trigger: GGAGATTCCTGAGACAACAAGGACCTCCCAGATGCAAGAGCTGCACAAGTCTCTCCGGTCTTTGAATAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS GCA 72 bp TTGAAGGTCCTGTCATATGAGCAAGTGGCTATGAGCTaGCCATCGGAAGAAATATCTAGGCCCATCACTTTG +
Preference number: 6 (lower is better)
Translates to: LKVLSYEQVAMS*PSEEISRPITL
Trigger: CAAAGTGATGGGCCTAGATATTTCTTCCGATGGGCAGCTCATAGCCACTTGCTCATATGACAGGACCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 72 bp CCTTTTCCCATTGTCATCTATTCAGCCATCCACAGCTaGAAGGTCCTGTCATATGAGCAAGTGGCTATGAGC +
Preference number: 6 (lower is better)
Translates to: PFPIVIYSAIHS*KVLSYEQVAMS
Trigger: GCTCATAGCCACTTGCTCATATGACAGGACCTTCAAGCTGTGGATGGCTGAATAGATGACAATGGGAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 90 bp CATCTTTTGGGTCCAAGGAGACAGTGGATTTGGGATGGAATACAATaGCTCCTACATTTGTGTTATGCCCTCGAAGAGTGTGAAGGAGGT +
Preference number: 6 (lower is better)
Translates to: HLLGPRRQWIWDGIQ*LLHLCYALEECEGG
Trigger: ACCTCCTTCACACTCTTCGAGGGCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAATCCACTGTCTCCTTGGACCCAAAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS TCA 72 bp TCTCAAACTCAGCCAATACTTCTGCCTGTCGCTCGCTaGTATGCTCTTCAATTTCAAACACTTCTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: SQTQPILLPVAR*YALQFQTLLQR
Trigger: CCTCTGGAGAAGTGTTTGAAATTGAAGAGCATATCAGCGAGCGACAGGCAGAAGTATTGGCTGAGTTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS TCA 72 bp TTCCATAGATTTCTTTCAGGTGGCCTTCTAAGAACATaGTACAACGTCCTGTGCGTAGGTCCCAAACTCGAC +
Preference number: 6 (lower is better)
Translates to: FHRFLSGGLLRT*YNVLCVGPKLD
Trigger: GTCGAGTTTGGGACCTACGCACAGGACGTTGTATCATGTTCTTAGAAGGCCACCTGAAAGAAATCTATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS GCA 72 bp GTCCAAGGAGACAGTGGATTTGGGATGGAATACAATTaGTCCTACATTTGTGTTATGCCCTCGAAGAGTGTG +
Preference number: 6 (lower is better)
Translates to: VQGDSGFGMEYN*SYICVMPSKSV
Trigger: CACACTCTTCGAGGGCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAATCCACTGTCTCCTTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 72 bp AAAATTATTCAAAGACCGGAGAGACTTGTGCAGCTCTaGCATCTGGGAGGTCCTTGTTGTCTCAGGAATCTC +
Preference number: 6 (lower is better)
Translates to: KIIQRPERLVQL*HLGGPCCLRNL
Trigger: GAGATTCCTGAGACAACAAGGACCTCCCAGATGCAAGAGCTGCACAAGTCTCTCCGGTCTTTGAATAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS GCA 72 bp TCCAGAGGTTATATTAATATTTCCAGCTTCGATCCCTaGTTTAAGTCCGTCTTTCCCCAAAATCCCAGACTC +
Preference number: 6 (lower is better)
Translates to: SRGYINISSFDP*FKSVFPQNPRL
Trigger: GAGTCTGGGATTTTGGGGAAAGACGGACTTAAAGCAGGGATCGAAGCTGGAAATATTAATATAACCTCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374198.5
ENST00000374199.9
CDS CAA 72 bp CACCTTCAAGCTATTTGGTCCTTCATGATACCAGGTTaGCTGATACTGAAAGGCAAATTAAGAGCAGAAAGG +
Preference number: 6 (lower is better)
Translates to: HLQAIWSFMIPG*LILKGKLRAER
Trigger: CCTTTCTGCTCTTAATTTGCCTTTCAGTATCAGCAAACCTGGTATCATGAAGGACCAAATAGCTTGAAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488937.1
CDS TCA 72 bp CTACATGGTTATACCAGGAATGCCATGATTCTTTCCTaGCTGGAAAACTCACTTAGCTCCATTCATACTTAC +
Preference number: 6 (lower is better)
Translates to: LHGYTRNAMILS*LENSLSSIHTY
Trigger: GTAAGTATGAATGGAGCTAAGTGAGTTTTCCAGTCAGGAAAGAATCATGGCATTCCTGGTATAACCATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488937.1
CDS TCA 72 bp ATGATATGTAACTACATGGTTATACCAGGAATGCCATaGTTCTTTCCTGACTGGAAAACTCACTTAGCTCCA +
Preference number: 6 (lower is better)
Translates to: MICNYMVIPGMP*FFPDWKTHLAP
Trigger: TGGAGCTAAGTGAGTTTTCCAGTCAGGAAAGAATCATGGCATTCCTGGTATAACCATGTAGTTACATATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488937.1