RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRPF38B (Homo sapiens)

Ensembl gene IDs: ENSG00000134186

Ensembl transcript IDs: ENST00000370021.1, ENST00000370022.9, ENST00000370025.9, ENST00000467302.5, ENST00000485810.1

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCAAGGTGGCTTCTGAGTGCGCATTAGTTGGCCAGTATAACCAGTaGGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACTG +
Preference number: 1 (lower is better)
Translates to: CKVASECALVGQYNQ*DKTNLNVRARFTTL
Trigger: CAGTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAACTAATGCGCACTCAGAAGCCACCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR TCA 90 bp ACAAACCTCAATGTGCGTGCCAGGTTCACTACACTGTCAGAATACTaGGTTTTAGCCCTAGCACTGACATCATTACTTTGGGCCTCTATT +
Preference number: 1 (lower is better)
Translates to: TNLNVRARFTTLSEY*VLALALTSLLWASI
Trigger: AATAGAGGCCCAAAGTAATGATGTCAGTGCTAGGGCTAAAACTCAGTATTCTGACAGTGTAGTGAACCTGGCACGCACATTGAGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR GCA 90 bp ATTCTAATAAAGATTATTGATTACCACATGCCCAATCCCAGTCTATaGATTTCTCCAAAATTCACTTGTCATCTGGGCACTAAGACATCC +
Preference number: 1 (lower is better)
Translates to: ILIKIIDYHMPNPSL*ISPKFTCHLGTKTS
Trigger: GGATGTCTTAGTGCCCAGATGACAAGTGAATTTTGGAGAAATGCATAGACTGGGATTGGGCATGTGGTAATCAATAATCTTTATTAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR TCA 90 bp AACTCTGTAAATAGACTACTGACACATAGCACTCAAAAAGTCTTATaGACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACA +
Preference number: 1 (lower is better)
Translates to: NSVNRLLTHSTQKVL*TLKHKVVDWVDIGT
Trigger: TGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCATAAGACTTTTTGAGTGCTATGTGTCAGTAGTCTATTTACAGAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370022.9
3UTR TCA 90 bp ATGCAAGAACAATCTGTGCATCATGTATCAAACTTAACAATTGGGTaGAAACACCAATGCAATAAATGGAATTACAAAGGCACTTCCCTA +
Preference number: 1 (lower is better)
Translates to: MQEQSVHHVSNLTIG*KHQCNKWNYKGTSL
Trigger: TAGGGAAGTGCCTTTGTAATTCCATTTATTGCATTGGTGTTTTCACCCAATTGTTAAGTTTGATACATGATGCACAGATTGTTCTTGCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR TCA 90 bp CTGACAAAGGGAACTGCCATTATCAAGTATTCTAATAAAGATTATTaGTTACCACATGCCCAATCCCAGTCTATGCATTTCTCCAAAATT +
Preference number: 1 (lower is better)
Translates to: LTKGTAIIKYSNKDY*LPHAQSQSMHFSKI
Trigger: AATTTTGGAGAAATGCATAGACTGGGATTGGGCATGTGGTAATCAATAATCTTTATTAGAATACTTGATAATGGCAGTTCCCTTTGTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR TCA 90 bp CAGATACATGTGCAGAACGTGCCGGTTTGTTACCTAGATATACATGTACCTTGGTTGCAAGGTGGCTTCTaGGTGCGCATTAGTTGGCCA +
Preference number: 2 (lower is better)
Translates to: QIHVQNVPVCYLDIHVPWLQGGF*VRISWP
Trigger: TGGCCAACTAATGCGCACTCAGAAGCCACCTTGCAA...CCAAGGTACATGTATATCTAGGTAACAAACCGGCACGTTCTGCACATGTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
3UTR-3UTR GCA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCGGAGAGCTTGAGGAGTaGGAACTACTGCACAATCTC +
Preference number: 2 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLGELEE*ELLHNL
Trigger: GAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCC...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR GCA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCGTTTCTCTACTCATCTaGCCCACCCTCTCCCCATTA +
Preference number: 2 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLVSLLI*PTLSPL
Trigger: TAATGGGGAGAGGGTGGGGCAGATGAGTAGAGAAAC...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR GCA 90 bp ATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCCTAAGGAGTGCGAACTACTaGACAATCTCAACGTGGGGG +
Preference number: 2 (lower is better)
Translates to: MLILQCCLLVHWQHILLLRSANY*TISTWG
Trigger: CCCCCACGTTGAGATTGTGCAGTAGTTCGCACTCCT...TAGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR GCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACGTTTCTCTACTCATCTaGCCCACCCTCTCCCCATTA +
Preference number: 2 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHVSLLI*PTLSPL
Trigger: TAATGGGGAGAGGGTGGGGCAGATGAGTAGAGAAAC...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR TCA 90 bp CAGATACATGTGCAGAACGTGCCGGTTTGTTACCTAGATATACATGTACCTTGGACACTGTCAGAATACTaGGTTTTAGCCCTAGCACTG +
Preference number: 2 (lower is better)
Translates to: QIHVQNVPVCYLDIHVPWTLSEY*VLALAL
Trigger: CAGTGCTAGGGCTAAAACTCAGTATTCTGACAGTGT...CCAAGGTACATGTATATCTAGGTAACAAACCGGCACGTTCTGCACATGTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370025.9
3UTR-3UTR GCA 90 bp CACAAGAAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTAGGAGTGCGAACTACTaGACAATCTCAACGTGGGGG +
Preference number: 2 (lower is better)
Translates to: HKKSNVVTIIELSIEVIVRSANY*TISTWG
Trigger: CCCCCACGTTGAGATTGTGCAGTAGTTCGCACTCCT...AACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTTCTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
3UTR-3UTR GCA 90 bp ATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCCTAGGAGAGCTTGAGGAGTaGGAACTACTGCACAATCTC +
Preference number: 2 (lower is better)
Translates to: MLILQCCLLVHWQHILLLGELEE*ELLHNL
Trigger: GAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCC...TAGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR TCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCATGGAAGCTTGAGGCTTaGATCTGTTTCTCTACTCAT +
Preference number: 2 (lower is better)
Translates to: LASITSEIKQTSMCVPGSWKLEA*ICFSTH
Trigger: ATGAGTAGAGAAACAGATTCAAGCCTCAAGCTTCCA...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR GCA 90 bp CTCATCTGCCCCACCCTCTCCCCATTACATGTTAGTATAGGGTTCTGCAAGAATATGTTAATCCTACAATaGTGCCTTCTTGTACATTGG +
Preference number: 2 (lower is better)
Translates to: LICPTLSPLHVSIGFCKNMLILQ*CLLVHW
Trigger: CCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT...ATTCTTGCAGAACCCTATACTAACATGTAATGGGGAGAGGGTGGGGCAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR CCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTCTGTGTTACCCAGGCTaGAATGCAGTGGCAATGATC +
Preference number: 2 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTALCYPG*NAVAMI
Trigger: GATCATTGCCACTGCATTCCAGCCTGGGTAACACAG...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
3UTR-3UTR TCA 90 bp CAGATACATGTGCAGAACGTGCCGGTTTGTTACCTAGATATACATGTACCTTGGGGCCAGTATAACCAGTaGGATAAAACAAACCTCAAT +
Preference number: 2 (lower is better)
Translates to: QIHVQNVPVCYLDIHVPWGQYNQ*DKTNLN
Trigger: ATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCC...CCAAGGTACATGTATATCTAGGTAACAAACCGGCACGTTCTGCACATGTATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370025.9
3UTR-3UTR GCA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCTTATTGATTACCACATaGCCAATCCCAGTCTATGCA +
Preference number: 2 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLLLITT*PIPVYA
Trigger: TGCATAGACTGGGATTGGGCATGTGGTAATCAATAA...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR CCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACAATTCACTTGTCATCTaGGCACTAAGACATCCCTGT +
Preference number: 2 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHNSLVI*ALRHPC
Trigger: ACAGGGATGTCTTAGTGCCCAGATGACAAGTGAATT...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR CAA 90 bp CTAAAATGGAGTGGTACATATGTTAAGCCCACATATGGAGGACTCTaGCAAGTGTACTCGTTTGCTCCATTTAACATTTTTGCAAGGTGG +
Preference number: 2 (lower is better)
Translates to: LKWSGTYVKPTYGGL*QVYSFAPFNIFARW
Trigger: CCACCTTGCAAAAATGTTAAATGGAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTACCACTCCATTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR TCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATACACGAAAGAGGAAATaGAAATGCAGCCTACAGGGA +
Preference number: 2 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHTRKRK*KCSLQG
Trigger: TCCCTGTAGGCTGCATTTTCATTTCCTCTTTCGTGT...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR TCA 90 bp AAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTCTTTCAACACGAAAGAGGAAATaGAAATGCAGCCTACAGGGA +
Preference number: 2 (lower is better)
Translates to: KSNVVTIIELSIEVIVLSTRKRK*KCSLQG
Trigger: TCCCTGTAGGCTGCATTTTCATTTCCTCTTTCGTGT...TGAAAGAACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
3UTR-3UTR TCA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATAAATGCTTTGGAAGCTTaGGGCTTGAATCTGTTTCTC +
Preference number: 2 (lower is better)
Translates to: TSLYTKCDSTDVSSISTINALEA*GLNLFL
Trigger: GAGAAACAGATTCAAGCCTCAAGCTTCCAAAGCATT...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR TCA 90 bp CACAAGAAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTACATGTAACAACCACTaGCAAAGGGAACTGCCATTA +
Preference number: 2 (lower is better)
Translates to: HKKSNVVTIIELSIEVIVTCNNH*QRELPL
Trigger: TAATGGCAGTTCCCTTTGTCAGTGGTTGTTACATGT...AACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTTCTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
3UTR-3UTR GCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTCCAACTCTTCAATTCTaGACTTCTATGCAAGTGGGA +
Preference number: 2 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAPTLQF*TSMQVG
Trigger: TCCCACTTGCATAGAAGTGCAGAATTGAAGAGTTGG...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
3UTR-3UTR GCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTACCACGCCCAGCCAATaGATACACGATTTAAATCTA +
Preference number: 2 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTATTPSQ*IHDLNL
Trigger: TAGATTTAAATCGTGTATGCATTGGCTGGGCGTGGT...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
3UTR CAA 90 bp ACAGTAGACAAGAATGTTAATCCTACAATGCTGCCTTCTTGTACATaGGCAGCACATACTTCTCCTATAATAGACATCCAAGATCCATTC +
Preference number: 2 (lower is better)
Translates to: TVDKNVNPTMLPSCT*AAHTSPIIDIQDPF
Trigger: GAATGGATCTTGGATGTCTATTATAGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTTGTCTACTGT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR GCA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATATTAATCCTACAATGCTaGCTTCTTGTACATTGGCAG +
Preference number: 2 (lower is better)
Translates to: TSLYTKCDSTDVSSISTILILQC*LLVHWQ
Trigger: CTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAA...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR CCA 90 bp ATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCCTACACCAATGCAATAAATaGAATTACAAAGGCACTTCC +
Preference number: 2 (lower is better)
Translates to: MLILQCCLLVHWQHILLLHQCNK*NYKGTS
Trigger: GGAAGTGCCTTTGTAATTCCATTTATTGCATTGGTG...TAGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR CCA 90 bp AAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTCTTTCACACCAATGCAATAAATaGAATTACAAAGGCACTTCC +
Preference number: 2 (lower is better)
Translates to: KSNVVTIIELSIEVIVLSHQCNK*NYKGTS
Trigger: GGAAGTGCCTTTGTAATTCCATTTATTGCATTGGTG...TGAAAGAACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
3UTR-3UTR CAA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGGCCTACAGGGAGAGCTaGAGGAGTGCGAACTACTGC +
Preference number: 3 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLAYRES*RSANYC
Trigger: GCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGC...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR CAA 90 bp CTCATCTGCCCCACCCTCTCCCCATTACATGTTAGTATAGGGTTCTGCAAGAATTACAATGCTGCCTTCTaGTACATTGGCAGCACATAC +
Preference number: 3 (lower is better)
Translates to: LICPTLSPLHVSIGFCKNYNAAF*YIGSTY
Trigger: GTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTA...ATTCTTGCAGAACCCTATACTAACATGTAATGGGGAGAGGGTGGGGCAGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR TCA 72 bp GCTTCTGAGTGCGCATTAGTTGGCCAGTATAACCAGTaGGATAAAACAAACCTCAATGTGCGTGCCAGGTTC +
Preference number: 3 (lower is better)
Translates to: ASECALVGQYNQ*DKTNLNVRARF
Trigger: GAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAACTAATGCGCACTCAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR CAA 90 bp AAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTCTTTCAGCCTACAGGGAGAGCTaGAGGAGTGCGAACTACTGC +
Preference number: 3 (lower is better)
Translates to: KSNVVTIIELSIEVIVLSAYRES*RSANYC
Trigger: GCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGC...TGAAAGAACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
3UTR TCA 72 bp CCGGTTTGTTACCTAGATATACATGTACCTTGGTGGTaGGCTGCACCCATCAACCTGTCATCTACATTAGGT +
Preference number: 3 (lower is better)
Translates to: PVCYLDIHVPWW*AAPINLSSTLG
Trigger: ACCTAATGTAGATGACAGGTTGATGGGTGCAGCTCACCACCAAGGTACATGTATATCTAGGTAACAAACCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
3UTR TCA 72 bp AATGTGCGTGCCAGGTTCACTACACTGTCAGAATACTaGGTTTTAGCCCTAGCACTGACATCATTACTTTGG +
Preference number: 3 (lower is better)
Translates to: NVRARFTTLSEY*VLALALTSLLW
Trigger: CCAAAGTAATGATGTCAGTGCTAGGGCTAAAACTCAGTATTCTGACAGTGTAGTGAACCTGGCACGCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR GCA 72 bp GCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTaGGTGCCAGGTTCACTACACTGTCAGAATACTGAG +
Preference number: 3 (lower is better)
Translates to: ASITSEIKQTSM*VPGSLHCQNTE
Trigger: CTCAGTATTCTGACAGTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR CAA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGAAATGCTTTGGAAGCTaGAGGCTTGAATCTGTTTCT +
Preference number: 3 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLKCFGS*RLESVS
Trigger: AGAAACAGATTCAAGCCTCAAGCTTCCAAAGCATTT...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR CCA 72 bp CCAGTCTATGCATTTCTCCAAAATTCACTTGTCATCTaGGCACTAAGACATCCCTGTACACAAAGTGTGACT +
Preference number: 3 (lower is better)
Translates to: PVYAFLQNSLVI*ALRHPCTQSVT
Trigger: AGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGAATTTTGGAGAAATGCATAGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR CAA 90 bp CACAAGAAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTCTGCCTTCTTGTACATaGGCAGCACATACTTCTCCT +
Preference number: 3 (lower is better)
Translates to: HKKSNVVTIIELSIEVIVLPSCT*AAHTSP
Trigger: AGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAG...AACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTTCTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
3UTR-3UTR CAA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCAAAATGCTTTGGAAGCTaGAGGCTTGAATCTGTTTCT +
Preference number: 3 (lower is better)
Translates to: LASITSEIKQTSMCVPGSKCFGS*RLESVS
Trigger: AGAAACAGATTCAAGCCTCAAGCTTCCAAAGCATTT...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR CAA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTGCAGTGGCAATGATCTaGGCTCACAGCAAATTCTGT +
Preference number: 3 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAAVAMI*AHSKFC
Trigger: ACAGAATTTGCTGTGAGCCAAGATCATTGCCACTGC...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
3UTR-3UTR CAA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATCTGCCTTCTTGTACATaGGCAGCACATACTTCTCCT +
Preference number: 3 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHLPSCT*AAHTSP
Trigger: AGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAG...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR CAA 90 bp CACAAGAAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTACATATGGAGGACTCTaGCAAGTGTACTCGTTTGCT +
Preference number: 3 (lower is better)
Translates to: HKKSNVVTIIELSIEVIVTYGGL*QVYSFA
Trigger: AGCAAACGAGTACACTTGCAAGAGTCCTCCATATGT...AACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTTCTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
3UTR GCA 72 bp AAGATTATTGATTACCACATGCCCAATCCCAGTCTATaGATTTCTCCAAAATTCACTTGTCATCTGGGCACT +
Preference number: 3 (lower is better)
Translates to: KIIDYHMPNPSL*ISPKFTCHLGT
Trigger: AGTGCCCAGATGACAAGTGAATTTTGGAGAAATGCATAGACTGGGATTGGGCATGTGGTAATCAATAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR GCA 72 bp GTGGTACATATGTTAAGCCCACATATGGAGGACTCTTaGAAGTGTACTCGTTTGCTCCATTTAACATTTTTG +
Preference number: 3 (lower is better)
Translates to: VVHMLSPHMEDS*KCTRLLHLTFL
Trigger: CAAAAATGTTAAATGGAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
3UTR-3UTR CAA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTTTCATTTTTGACATGTaGGACTTCACCATGCAAGTA +
Preference number: 3 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAFIFDM*DFTMQV
Trigger: TACTTGCATGGTGAAGTCCAACATGTCAAAAATGAA...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CCA 90 bp AATGCAGCCTACAGGGAGAGCTTGAGGAGTGCGAACTACTGCACAATCTCAACGTCGCTGTGCCCCAGCTaGGCAAGAGAGGGCACCCGA +
Preference number: 4 (lower is better)
Translates to: NAAYRESLRSANYCTISTSLCPS*AREGTR
Trigger: TCGGGTGCCCTCTCTTGCCCAGCTGGGGCACAGCGA...CGTTGAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGCTGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGGCTGCGGCTGCGAGTTaGCTGTCAGCGCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLAAAAS*LSARGC
Trigger: ACAGCCCCGCGCTGACAGGCAACTCGCAGCCGCAGC...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGCCTGCGACCCTGGGCTaGTCCGAGCCTCGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLPATLG*SEPRCK
Trigger: CTTGCAGCGAGGCTCGGAGCAGCCCAGGGTCGCAGG...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370021.1
CDS-3UTR GCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCAGGGAGCACATTGCCCTaGTTGCCGGAGACCGCCGGC +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSGSTLP*LPETAG
Trigger: GCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCC...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGCTCTACCTGCGACCCTaGGCTGCTCCGAGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLLYLRP*AAPSLA
Trigger: AGCGAGGCTCGGAGCAGCCCAGGGTCGCAGGTAGAG...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370021.1
CDS-3UTR TCA 90 bp AATGCAGCCTACAGGGAGAGCTTGAGGAGTGCGAACTACTGCACAATCTCAACGCCTCGTGGTAGGTCTTaGGCTCGTAGAGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: NAAYRESLRSANYCTISTPRGRS*ARRAVL
Trigger: AAGTACAGCTCTACGAGCTCAAGACCTACCACGAGG...CGTTGAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGCTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp ATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCCTAGCAGCCGCCTGGTGCTaGGGCTGCGAGTTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: MLILQCCLLVHWQHILLLAAAWC*GCELPV
Trigger: GACAGGCAACTCGCAGCCGCAGCACCAGGCGGCTGC...TAGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCAGAGCGGGAGCACATTaGCCTGCTTGCCGGAGACCG +
Preference number: 4 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLRAGAH*PACRRP
Trigger: CGGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCT...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp CAGATACATGTGCAGAACGTGCCGGTTTGTTACCTAGATATACATGTACCTTGGAGAGCGGGAGCACATTaGCCTGCTTGCCGGAGACCG +
Preference number: 4 (lower is better)
Translates to: QIHVQNVPVCYLDIHVPWRAGAH*PACRRP
Trigger: CGGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCT...CCAAGGTACATGTATATCTAGGTAACAAACCGGCACGTTCTGCACATGTATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR CCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACTCGCTGTGCCCCAGCTaGGCAAGAGAGGGCACCCGA +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHSLCPS*AREGTR
Trigger: TCGGGTGCCCTCTCTTGCCCAGCTGGGGCACAGCGA...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATACACTGCTGCTGTTGCTaGGCCGCAGCTGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: TSLYTKCDSTDVSSISTIHCCCC*AAAAAA
Trigger: GGCGGCTGCAGCTGCGGCTCAGCAACAGCAGCAGTG...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTCACTGCTGCTGTTGCTaGGCCGCAGCTGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAHCCCC*AAAAAA
Trigger: GGCGGCTGCAGCTGCGGCTCAGCAACAGCAGCAGTG...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR TCA 90 bp AATGCAGCCTACAGGGAGAGCTTGAGGAGTGCGAACTACTGCACAATCTCAACGTCAGGATCATGGGGTTaGGGTTCATGGTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: NAAYRESLRSANYCTISTSGSWG*GSWSSR
Trigger: ACGAGAAGACCATGAACCTCAACCCCATGATCCTGA...CGTTGAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTGCAGCCGCCTGGTGCTaGGGCTGCGAGTTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAAAAWC*GCELPV
Trigger: GACAGGCAACTCGCAGCCGCAGCACCAGGCGGCTGC...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR GCA 90 bp ATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCCTAGCACATTGCCCTGCTTaGCGGAGACCGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MLILQCCLLVHWQHILLLAHCPA*RRPPAW
Trigger: CCAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGC...TAGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTGGGAGCACATTGCCCTaGTTGCCGGAGACCGCCGGC +
Preference number: 4 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAGSTLP*LPETAG
Trigger: GCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCC...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR GCA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATAGGGAGCACATTGCCCTaGTTGCCGGAGACCGCCGGC +
Preference number: 4 (lower is better)
Translates to: TSLYTKCDSTDVSSISTIGSTLP*LPETAG
Trigger: GCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCC...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATGCTGCGGCTGCGAGTTaGCTGTCAGCGCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHAAAAS*LSARGC
Trigger: ACAGCCCCGCGCTGACAGGCAACTCGCAGCCGCAGC...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAAGCTGCGGCTGCGAGTTaGCTGTCAGCGCGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQAAAAS*LSARGC
Trigger: ACAGCCCCGCGCTGACAGGCAACTCGCAGCCGCAGC...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR GCA 90 bp CACAAGAAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTGCACATTGCCCTGCTTaGCGGAGACCGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HKKSNVVTIIELSIEVIVAHCPA*RRPPAW
Trigger: CCAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGC...AACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTTCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR CCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTTCGCTGTGCCCCAGCTaGGCAAGAGAGGGCACCCGA +
Preference number: 4 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTASLCPS*AREGTR
Trigger: TCGGGTGCCCTCTCTTGCCCAGCTGGGGCACAGCGA...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CCA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCCCGCACATCCCTGTCTaGCCCGCTGTTTTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLPHIPV*PAVFLL
Trigger: AAGCAGGAAAACAGCGGGCCAGACAGGGATGTGCGG...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp AATGCAGCCTACAGGGAGAGCTTGAGGAGTGCGAACTACTGCACAATCTCAACGCTTTCTCCCTTTCTTTaGCTTCACGCTCTAGTCGCT +
Preference number: 4 (lower is better)
Translates to: NAAYRESLRSANYCTISTLSPFL*LHALVA
Trigger: AGCGACTAGAGCGTGAAGCCAAAGAAAGGGAGAAAG...CGTTGAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATACCGACGCCGACAAAATaGCCCCGGGCCAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: TSLYTKCDSTDVSSISTIPTPTK*PRAKSR
Trigger: TCTGCTCTTGGCCCGGGGTCATTTTGTCGGCGTCGG...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp CACAAGAAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTCCGACGCCGACAAAATaGCCCCGGGCCAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: HKKSNVVTIIELSIEVIVPTPTK*PRAKSR
Trigger: TCTGCTCTTGGCCCGGGGTCATTTTGTCGGCGTCGG...AACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTTCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR TCA 90 bp CTCATCTGCCCCACCCTCTCCCCATTACATGTTAGTATAGGGTTCTGCAAGAATATGACTTCTACTTCTTaGCCTTCTTGGGGACCTCCG +
Preference number: 4 (lower is better)
Translates to: LICPTLSPLHVSIGFCKNMTSTS*PSWGPP
Trigger: CGGAGGTCCCCAAGAAGGTCAAGAAGTAGAAGTCAT...ATTCTTGCAGAACCCTATACTAACATGTAATGGGGAGAGGGTGGGGCAGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATGCACTCCAGTCTGGGTaGCAGAGCCAGGCCCGTCTC +
Preference number: 4 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHALQSG*QSQARL
Trigger: GAGACGGGCCTGGCTCTGTCACCCAGACTGGAGTGC...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR GCA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAAGCACATTGCCCTGCTTaGCGGAGACCGCCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQAHCPA*RRPPAW
Trigger: CCAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGC...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR GCA 90 bp AATGCAGCCTACAGGGAGAGCTTGAGGAGTGCGAACTACTGCACAATCTCAACGGAGACCTTGAACGTCTaGGTTCAACATGTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: NAAYRESLRSANYCTISTETLNV*VQHVCL
Trigger: TAGACAGACATGTTGAACGCAGACGTTCAAGGTCTC...CGTTGAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGCTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp CAGATACATGTGCAGAACGTGCCGGTTTGTTACCTAGATATACATGTACCTTGGTACTTCTGCTGCGCCTaGGTTCTAACCCCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: QIHVQNVPVCYLDIHVPWYFCCA*VLTPGQ
Trigger: TTGACCGGGGGTTAGAACGCAGGCGCAGCAGAAGTA...CCAAGGTACATGTATATCTAGGTAACAAACCGGCACGTTCTGCACATGTATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR GCA 90 bp CTCATCTGCCCCACCCTCTCCCCATTACATGTTAGTATAGGGTTCTGCAAGAATGGAGAGCTTGAGGAGTaGGAACTACTGCACAATCTC +
Preference number: 4 (lower is better)
Translates to: LICPTLSPLHVSIGFCKNGELEE*ELLHNL
Trigger: GAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCC...ATTCTTGCAGAACCCTATACTAACATGTAATGGGGAGAGGGTGGGGCAGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGTGCTCCGAGCCTCGCTaGAAGACTGAGTCAATCCTT +
Preference number: 4 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLCSEPR*KTESIL
Trigger: AAGGATTGACTCAGTCTTGCAGCGAGGCTCGGAGCA...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370021.1
CDS-3UTR GCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCATCCCATGGTTCAACGTaGGTGACCTCTACCTGCGAC +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSSHGST*VTSTCD
Trigger: GTCGCAGGTAGAGGTCACGCACGTTGAACCATGGGA...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370021.1
CDS-3UTR CCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCATTCGGGACAACGGTCTaGGACCCTACTCCATCGAAC +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSFGTTV*DPTPSN
Trigger: GTTCGATGGAGTAGGGTCCCAGACCGTTGTCCCGAA...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp CTCATCTGCCCCACCCTCTCCCCATTACATGTTAGTATAGGGTTCTGCAAGAATGCTTCCTTTCTCCCATaGTTCAACGTGCGTGACCTT +
Preference number: 4 (lower is better)
Translates to: LICPTLSPLHVSIGFCKNASFLP*FNVRDL
Trigger: AAGGTCACGCACGTTGAACCATGGGAGAAAGGAAGC...ATTCTTGCAGAACCCTATACTAACATGTAATGGGGAGAGGGTGGGGCAGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR CCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCATCTTGGGGACCTCCGTaGACTCAGAGATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSSWGPP*TQRSPW
Trigger: CCAAGGAGATCTCTGAGTCCACGGAGGTCCCCAAGA...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCTCTTGGGGACCTCCGTaGACTCAGAGATCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLSWGPP*TQRSPW
Trigger: CCAAGGAGATCTCTGAGTCCACGGAGGTCCCCAAGA...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAACCGACGCCGACAAAATaGCCCCGGGCCAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQPTPTK*PRAKSR
Trigger: TCTGCTCTTGGCCCGGGGTCATTTTGTCGGCGTCGG...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR TCA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGTCTCCTTGGAGACCTTaGACGTCTGCGTTCAACATG +
Preference number: 4 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLSPWRP*TSAFNM
Trigger: CATGTTGAACGCAGACGTTCAAGGTCTCCAAGGAGA...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp AATGCAGCCTACAGGGAGAGCTTGAGGAGTGCGAACTACTGCACAATCTCAACGACATGTAACAACCACTaGCAAAGGGAACTGCCATTA +
Preference number: 4 (lower is better)
Translates to: NAAYRESLRSANYCTISTTCNNH*QRELPL
Trigger: TAATGGCAGTTCCCTTTGTCAGTGGTTGTTACATGT...CGTTGAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGCTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAAAGAGCGGGAGCACATTaGCCTGCTTGCCGGAGACCG +
Preference number: 4 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQRAGAH*PACRRP
Trigger: CGGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCT...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR GCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCAGGCCCGCTGTTTTCCTaGTTCCTTTCTCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSGPLFS*FLSPMV
Trigger: AACCATGGGAGAAAGGAAGCAGGAAAACAGCGGGCC...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACTACTTCTGCTGCGCCTaGGTTCTAACCCCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHYFCCA*VLTPGQ
Trigger: TTGACCGGGGGTTAGAACGCAGGCGCAGCAGAAGTA...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACTTTCCCTACTTCTGCTaGGCCTGCGTTCTAACCCCC +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHFPYFC*ACVLTP
Trigger: GGGGGTTAGAACGCAGGCGCAGCAGAAGTAGGGAAA...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACGCCTTTCCCTACTTCTaGTGCGCCTGCGTTCTAACC +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHAFPYF*CACVLT
Trigger: GGTTAGAACGCAGGCGCAGCAGAAGTAGGGAAAGGC...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCAAGGAGTGCGAACTACTaGACAATCTCAACGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSRSANY*TISTWG
Trigger: CCCCCACGTTGAGATTGTGCAGTAGTTCGCACTCCT...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGGTTTCTCTACTCATCTaGCCCACCCTCTCCCCATTA +
Preference number: 4 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLVSLLI*PTLSPL
Trigger: TAATGGGGAGAGGGTGGGGCAGATGAGTAGAGAAAC...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp CTCATCTGCCCCACCCTCTCCCCATTACATGTTAGTATAGGGTTCTGCAAGAATAAGGTGGCTTCTGAGTaGGCATTAGTTGGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: LICPTLSPLHVSIGFCKNKVASE*ALVGQY
Trigger: ATACTGGCCAACTAATGCGCACTCAGAAGCCACCTT...ATTCTTGCAGAACCCTATACTAACATGTAATGGGGAGAGGGTGGGGCAGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCAGCTTCCTTTCTCCCATaGTTCAACGTGCGTGACCTC +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSASFLP*FNVRDL
Trigger: GAGGTCACGCACGTTGAACCATGGGAGAAAGGAAGC...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370021.1
CDS-3UTR TCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACGTAGAGCTGTACTTTaGAGTAAGGCGACGACAGGA +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSRRAVL*SKATTG
Trigger: TCCTGTCGTCGCCTTACTTCAAAGTACAGCTCTACG...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCCGACTGCGACTTCTATaGCTTTCCCTACTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLRLRLL*LSLLLL
Trigger: CAGCAGAAGTAGGGAAAGGCATAGAAGTCGCAGTCG...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACAGGAGTGCGAACTACTaGACAATCTCAACGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHRSANY*TISTWG
Trigger: CCCCCACGTTGAGATTGTGCAGTAGTTCGCACTCCT...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp AATGCAGCCTACAGGGAGAGCTTGAGGAGTGCGAACTACTGCACAATCTCAACGTTAATCCTACAATGCTaGCTTCTTGTACATTGGCAG +
Preference number: 4 (lower is better)
Translates to: NAAYRESLRSANYCTISTLILQC*LLVHWQ
Trigger: CTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAA...CGTTGAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGCTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp CTCATCTGCCCCACCCTCTCCCCATTACATGTTAGTATAGGGTTCTGCAAGAATAAACAAACCTCAATGTaGGTGCCAGGTTCACTACAC +
Preference number: 4 (lower is better)
Translates to: LICPTLSPLHVSIGFCKNKQTSM*VPGSLH
Trigger: GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTT...ATTCTTGCAGAACCCTATACTAACATGTAATGGGGAGAGGGTGGGGCAGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp AAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTCTTTCACCGGGTGTGCTAGCATaGACCTGTGGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: KSNVVTIIELSIEVIVLSPGVLA*TCGPSY
Trigger: GTAGCTGGGACCACAGGTGCATGCTAGCACACCCGG...TGAAAGAACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR CCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTCCGCACATCCCTGTCTaGCCCGCTGTTTTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAPHIPV*PAVFLL
Trigger: AAGCAGGAAAACAGCGGGCCAGACAGGGATGTGCGG...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CCA 90 bp AAGAATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCCGCACATCCCTGTCTaGCCCGCTGTTTTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: KNVNPTMLPSCTLAAHTSPHIPV*PAVFLL
Trigger: AAGCAGGAAAACAGCGGGCCAGACAGGGATGTGCGG...AGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACTCAGGATCATGGGGTTaGGGTTCATGGTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHSGSWG*GSWSSR
Trigger: ACGAGAAGACCATGAACCTCAACCCCATGATCCTGA...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp ATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCCTACCTCGTGGTAGGTCTTaGGCTCGTAGAGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: MLILQCCLLVHWQHILLLPRGRS*ARRAVL
Trigger: AAGTACAGCTCTACGAGCTCAAGACCTACCACGAGG...TAGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACTCTCCTTGGAGACCTTaGACGTCTGCGTTCAACATG +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHSPWRP*TSAFNM
Trigger: CATGTTGAACGCAGACGTTCAAGGTCTCCAAGGAGA...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp ATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCCTATTGCAAGGTGGCTTCTaGGTGCGCATTAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: MLILQCCLLVHWQHILLLLQGGF*VRISWP
Trigger: TGGCCAACTAATGCGCACTCAGAAGCCACCTTGCAA...TAGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATGTTCGGAGGATCACTTaGGCCAGGGAAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHVRRIT*AREVEA
Trigger: AGCCTCCACTTCCCTGGCTCAAGTGATCCTCCGAAC...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR TCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATATGGTTCAACGTGCGTaGCCTCTACCTGCGACCCTG +
Preference number: 4 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHMVQRA*PLPATL
Trigger: CAGGGTCGCAGGTAGAGGTCACGCACGTTGAACCAT...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370021.1
CDS-3UTR GCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTTCATGGTCTTCTCGTTaGCCCAGAGCGGGAGCACAT +
Preference number: 4 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTASWSSR*PRAGAH
Trigger: ATGTGCTCCCGCTCTGGGGCAACGAGAAGACCATGA...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR GCA 90 bp AAGAATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTTTTCCCTACTTCTGCTaGGCCTGCGTTCTAACCCCC +
Preference number: 4 (lower is better)
Translates to: KNVNPTMLPSCTLAAHTSFPYFC*ACVLTP
Trigger: GGGGGTTAGAACGCAGGCGCAGCAGAAGTAGGGAAA...AGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCTATCACGACTTCGACTaGGACTTCTATGCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLYHDFD*DFYAFP
Trigger: GGGAAAGGCATAGAAGTCGCAGTCGAAGTCGTGATA...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp AATGCAGCCTACAGGGAGAGCTTGAGGAGTGCGAACTACTGCACAATCTCAACGATGTTAATCCTACAATaGTGCCTTCTTGTACATTGG +
Preference number: 4 (lower is better)
Translates to: NAAYRESLRSANYCTISTMLILQ*CLLVHW
Trigger: CCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT...CGTTGAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGCTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCAAAACCTCAATGTGCGTaGCAGGTTCACTACACTGTC +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSKPQCA*QVHYTV
Trigger: GACAGTGTAGTGAACCTGGCACGCACATTGAGGTTT...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTTTCGGGACAACGGTCTaGGACCCTACTCCATCGAAC +
Preference number: 4 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAFGTTV*DPTPSN
Trigger: GTTCGATGGAGTAGGGTCCCAGACCGTTGTCCCGAA...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCATCACGCTCTAGTCGCTaGCGTTCTTTCTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSSRSSR*RSFSLS
Trigger: AGAAAGAGAGAAAGAACGCCAGCGACTAGAGCGTGA...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp AATGCAGCCTACAGGGAGAGCTTGAGGAGTGCGAACTACTGCACAATCTCAACGAGTACAAAAACTGGATaGAGGATGCTTATTAAGCTG +
Preference number: 4 (lower is better)
Translates to: NAAYRESLRSANYCTISTSTKTG*RMLIKL
Trigger: CAGCTTAATAAGCATCCTCCATCCAGTTTTTGTACT...CGTTGAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGCTGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR TCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTTGCTCAGGCTGGTCTTaGACTCTCGAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTACSGWS*TLEVLG
Trigger: TCCCAACACTTCGAGAGTTCAAGACCAGCCTGAGCA...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR TCA 90 bp ATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCCTACTGTCAGTTCTTCCTTaGCTGCCACTTCGACTTCGT +
Preference number: 4 (lower is better)
Translates to: MLILQCCLLVHWQHILLLLSVLP*LPLRLR
Trigger: ACGAAGTCGAAGTGGCAGTCAAGGAAGAACTGACAG...TAGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCATCCTTACTATCACTGTaGTCTCGTTTGTGGGAACGT +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSSLLSL*SRLWER
Trigger: ACGTTCCCACAAACGAGATCACAGTGATAGTAAGGA...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCAACACGAAAGAGGAAATaGAAATGCAGCCTACAGGGA +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSTRKRK*KCSLQG
Trigger: TCCCTGTAGGCTGCATTTTCATTTCCTCTTTCGTGT...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGAATGCTTTGGAAGCTTaGGGCTTGAATCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLNALEA*GLNLFL
Trigger: GAGAAACAGATTCAAGCCTCAAGCTTCCAAAGCATT...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATTCATGGTCTTCTCGTTaGCCCAGAGCGGGAGCACAT +
Preference number: 4 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHSWSSR*PRAGAH
Trigger: ATGTGCTCCCGCTCTGGGGCAACGAGAAGACCATGA...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp AAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTCTTTCATCATGGTCTTCTCGTTaGCCCAGAGCGGGAGCACAT +
Preference number: 4 (lower is better)
Translates to: KSNVVTIIELSIEVIVLSSWSSR*PRAGAH
Trigger: ATGTGCTCCCGCTCTGGGGCAACGAGAAGACCATGA...TGAAAGAACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR GCA 90 bp AAGAATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTGGCCCGCTGTTTTCCTaGTTCCTTTCTCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: KNVNPTMLPSCTLAAHTSGPLFS*FLSPMV
Trigger: AACCATGGGAGAAAGGAAGCAGGAAAACAGCGGGCC...AGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp CTCATCTGCCCCACCCTCTCCCCATTACATGTTAGTATAGGGTTCTGCAAGAATATAAGACCCATCACTTaGTTTCGAGTTAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: LICPTLSPLHVSIGFCKNIRPIT*FRVNFR
Trigger: CCTGAAGTTAACTCGAAAGCAAGTGATGGGTCTTAT...ATTCTTGCAGAACCCTATACTAACATGTAATGGGGAGAGGGTGGGGCAGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGCTTTTGTCATCTCTGTaGCGCCTATCATCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLLLSSL*RLSSLS
Trigger: AGACAAAGATGATAGGCGGCACAGAGATGACAAAAG...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGTCTACTTCGTTTCCCTaGATTTCTACTTCGACTCCT +
Preference number: 4 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLSTSFP*ISTSTP
Trigger: AGGAGTCGAAGTAGAAATGCAGGGAAACGAAGTAGA...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCAAAACAAACCTCAATGTaGGTGCCAGGTTCACTACAC +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSKQTSM*VPGSLH
Trigger: GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTT...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACAAGGTGGCTTCTGAGTaGGCATTAGTTGGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHKVASE*ALVGQY
Trigger: ATACTGGCCAACTAATGCGCACTCAGAAGCCACCTT...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACATATGGAGGACTCTTaGAAGTGTACTCGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSHMEDS*KCTRLL
Trigger: GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATG...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCGTAGCATTTCTCCAATaGTCATTACACAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLVAFLQ*SLHSLH
Trigger: GTGGAGGCTGTGTAATGACCATTGGAGAAATGCTAC...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACTCACGCTCTAGTCGCTaGCGTTCTTTCTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHSRSSR*RSFSLS
Trigger: AGAAAGAGAGAAAGAACGCCAGCGACTAGAGCGTGA...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGAATTCACTTGTCATCTaGGCACTAAGACATCCCTGT +
Preference number: 4 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLNSLVI*ALRHPC
Trigger: ACAGGGATGTCTTAGTGCCCAGATGACAAGTGAATT...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAACCTCGTGGTAGGTCTTaGGCTCGTAGAGCTGTACTT +
Preference number: 4 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQPRGRS*ARRAVL
Trigger: AAGTACAGCTCTACGAGCTCAAGACCTACCACGAGG...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR TCA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATACTGTCAGTTCTTCCTTaGCTGCCACTTCGACTTCGT +
Preference number: 4 (lower is better)
Translates to: TSLYTKCDSTDVSSISTILSVLP*LPLRLR
Trigger: ACGAAGTCGAAGTGGCAGTCAAGGAAGAACTGACAG...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACTCCTTACTATCACTGTaGTCTCGTTTGTGGGAACGT +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHSLLSL*SRLWER
Trigger: ACGTTCCCACAAACGAGATCACAGTGATAGTAAGGA...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCACGATCATGTTTGTCTaGCTGGTCCTTACTATCACT +
Preference number: 4 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLTIMFV*LVLTIT
Trigger: AGTGATAGTAAGGACCAGTCAGACAAACATGATCGT...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCAACGATCATGTTTGTCTaGCTGGTCCTTACTATCACT +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSTIMFV*LVLTIT
Trigger: AGTGATAGTAAGGACCAGTCAGACAAACATGATCGT...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCAAATGCTTTGGAAGCTTaGGGCTTGAATCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSNALEA*GLNLFL
Trigger: GAGAAACAGATTCAAGCCTCAAGCTTCCAAAGCATT...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGGGCCAGTATAACCAGTaGGATAAAACAAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLGQYNQ*DKTNLN
Trigger: ATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCC...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATTTGCAAGGTGGCTTCTaGGTGCGCATTAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHLQGGF*VRISWP
Trigger: TGGCCAACTAATGCGCACTCAGAAGCCACCTTGCAA...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAAGGCCCGCTGTTTTCCTaGTTCCTTTCTCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQGPLFS*FLSPMV
Trigger: AACCATGGGAGAAAGGAAGCAGGAAAACAGCGGGCC...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR GCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACGAGACCTTGAACGTCTaGGTTCAACATGTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHETLNV*VQHVCL
Trigger: TAGACAGACATGTTGAACGCAGACGTTCAAGGTCTC...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp AAGAATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCGACTGCGACTTCTATaGCTTTCCCTACTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: KNVNPTMLPSCTLAAHTSRLRLL*LSLLLL
Trigger: CAGCAGAAGTAGGGAAAGGCATAGAAGTCGCAGTCG...AGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp CACAAGAAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTGTTTCTCTACTCATCTaGCCCACCCTCTCCCCATTA +
Preference number: 4 (lower is better)
Translates to: HKKSNVVTIIELSIEVIVVSLLI*PTLSPL
Trigger: TAATGGGGAGAGGGTGGGGCAGATGAGTAGAGAAAC...AACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTTCTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR CCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTGCTTCCTTTCTCCCATaGTTCAACGTGCGTGACCTT +
Preference number: 4 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAASFLP*FNVRDL
Trigger: AAGGTCACGCACGTTGAACCATGGGAGAAAGGAAGC...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
3UTR CAA 72 bp ACTTTAAGTTCAGATACATGTGCAGAACGTGCCGGTTaGTTACCTAGATATACATGTACCTTGGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: TLSSDTCAERAG*LPRYTCTLVVS
Trigger: GCTCACCACCAAGGTACATGTATATCTAGGTAACAAACCGGCACGTTCTGCACATGTATCTGAACTTAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR TCA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAATCAGGATCATGGGGTTaGGGTTCATGGTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQSGSWG*GSWSSR
Trigger: ACGAGAAGACCATGAACCTCAACCCCATGATCCTGA...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR TCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATCGTAGAGCTGTACTTTaGAGTAAGGCGACGACAGGA +
Preference number: 4 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHRRAVL*SKATTG
Trigger: TCCTGTCGTCGCCTTACTTCAAAGTACAGCTCTACG...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAACGTAGAGCTGTACTTTaGAGTAAGGCGACGACAGGA +
Preference number: 4 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQRRAVL*SKATTG
Trigger: TCCTGTCGTCGCCTTACTTCAAAGTACAGCTCTACG...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR TCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATATGACTTCTACTTCTTaGCCTTCTTGGGGACCTCCG +
Preference number: 4 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHMTSTS*PSWGPP
Trigger: CGGAGGTCCCCAAGAAGGTCAAGAAGTAGAAGTCAT...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACTGGAAGCTTGAGGCTTaGATCTGTTTCTCTACTCAT +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHWKLEA*ICFSTH
Trigger: ATGAGTAGAGAAACAGATTCAAGCCTCAAGCTTCCA...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACACATGTAACAACCACTaGCAAAGGGAACTGCCATTA +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHTCNNH*QRELPL
Trigger: TAATGGCAGTTCCCTTTGTCAGTGGTTGTTACATGT...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCGGCCAGTATAACCAGTaGGATAAAACAAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLGQYNQ*DKTNLN
Trigger: ATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCC...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATATATCACGACTTCGACTaGGACTTCTATGCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: TSLYTKCDSTDVSSISTIYHDFD*DFYAFP
Trigger: GGGAAAGGCATAGAAGTCGCAGTCGAAGTCGTGATA...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACCTTTTGTCATCTCTGTaGCGCCTATCATCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHLLSSL*RLSSLS
Trigger: AGACAAAGATGATAGGCGGCACAGAGATGACAAAAG...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCTTAATCCTACAATGCTaGCTTCTTGTACATTGGCAG +
Preference number: 4 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLLILQC*LLVHWQ
Trigger: CTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAA...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACCCAATCCCAGTCTATaGATTTCTCCAAAATTCACT +
Preference number: 4 (lower is better)
Translates to: LASITSEIKQTSMCVPGSPNPSL*ISPKFT
Trigger: AGTGAATTTTGGAGAAATGCATAGACTGGGATTGGG...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp AAGAATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTAAACCTCAATGTGCGTaGCAGGTTCACTACACTGTC +
Preference number: 4 (lower is better)
Translates to: KNVNPTMLPSCTLAAHTSKPQCA*QVHYTV
Trigger: GACAGTGTAGTGAACCTGGCACGCACATTGAGGTTT...AGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAAGCAAATTCTGTCTCCTaGGCTCAAGTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQANSVS*AQVILP
Trigger: TGGGAGGATCACTTGAGCCCAGGAGACAGAATTTGC...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CCA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAACTGTGTTACCCAGGCTaGAATGCAGTGGCAATGATC +
Preference number: 4 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQLCYPG*NAVAMI
Trigger: GATCATTGCCACTGCATTCCAGCCTGGGTAACACAG...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR TCA 90 bp AAGAATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTACACGAAAGAGGAAATaGAAATGCAGCCTACAGGGA +
Preference number: 4 (lower is better)
Translates to: KNVNPTMLPSCTLAAHTSTRKRK*KCSLQG
Trigger: TCCCTGTAGGCTGCATTTTCATTTCCTCTTTCGTGT...AGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATAACACTGTCAGAATACTaGGTTTTAGCCCTAGCACTG +
Preference number: 4 (lower is better)
Translates to: TSLYTKCDSTDVSSISTITLSEY*VLALAL
Trigger: CAGTGCTAGGGCTAAAACTCAGTATTCTGACAGTGT...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACATAAGACCCATCACTTaGTTTCGAGTTAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHIRPIT*FRVNFR
Trigger: CCTGAAGTTAACTCGAAAGCAAGTGATGGGTCTTAT...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCATGTTAATCCTACAATaGTGCCTTCTTGTACATTGG +
Preference number: 4 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLMLILQ*CLLVHW
Trigger: CCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATACATATGGAGGACTCTTaGAAGTGTACTCGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: TSLYTKCDSTDVSSISTIHMEDS*KCTRLL
Trigger: GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATG...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp AAGAATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTGTAGCATTTCTCCAATaGTCATTACACAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KNVNPTMLPSCTLAAHTSVAFLQ*SLHSLH
Trigger: GTGGAGGCTGTGTAATGACCATTGGAGAAATGCTAC...AGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATCTTTCTCCCTTTCTTTaGCTTCACGCTCTAGTCGCT +
Preference number: 4 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHLSPFL*LHALVA
Trigger: AGCGACTAGAGCGTGAAGCCAAAGAAAGGGAGAAAG...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACTCTTGTTCTATACTTTaGCTCCTTCGACGATCATGT +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHSCSIL*LLRRSC
Trigger: ACATGATCGTCGAAGGAGCCAAAGTATAGAACAAGA...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTGAAGAAGCTAGAGGGTaGAGAACTCTTCATCATCAA +
Preference number: 4 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAEEARG*RTLHHQ
Trigger: TTGATGATGAAGAGTTCTTCACCCTCTAGCTTCTTC...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR TCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATACACTGTCAGAATACTaGGTTTTAGCCCTAGCACTG +
Preference number: 4 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHTLSEY*VLALAL
Trigger: CAGTGCTAGGGCTAAAACTCAGTATTCTGACAGTGT...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACAAGCGCTCTAATATATaGAGAGTCTGTGTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHKRSNI*RVCVCY
Trigger: ATAACACACACAGACTCTCCATATATTAGAGCGCTT...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAAGAACTCTCGAAGTGTTaGGATTACAATGTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQELSKC*DYNVSH
Trigger: GTGGCTCACATTGTAATCCCAACACTTCGAGAGTTC...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CCA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCGGTTTTTCTAACTTCTaGGTGTCTATAGCACTAATT +
Preference number: 4 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLGFSNF*VSIALI
Trigger: AATTAGTGCTATAGACACCCAGAAGTTAGAAAAACC...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR TCA 90 bp AAGAATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTACCACTCCAGTTTTGTaGGAAAAGATCGTAGCATTT +
Preference number: 4 (lower is better)
Translates to: KNVNPTMLPSCTLAAHTSTTPVL*EKIVAF
Trigger: AAATGCTACGATCTTTTCTCACAAAACTGGAGTGGT...AGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp AAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTCTTTCATGGAAGCTTGAGGCTTaGATCTGTTTCTCTACTCAT +
Preference number: 4 (lower is better)
Translates to: KSNVVTIIELSIEVIVLSWKLEA*ICFSTH
Trigger: ATGAGTAGAGAAACAGATTCAAGCCTCAAGCTTCCA...TGAAAGAACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR GCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTATAAGACCCATCACTTaGTTTCGAGTTAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAIRPIT*FRVNFR
Trigger: CCTGAAGTTAACTCGAAAGCAAGTGATGGGTCTTAT...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR GCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATTCTACTTCGTTTCCCTaGATTTCTACTTCGACTCCT +
Preference number: 4 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHSTSFP*ISTSTP
Trigger: AGGAGTCGAAGTAGAAATGCAGGGAAACGAAGTAGA...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATCAGTTCTTCCTTGACTaGCACTTCGACTTCGTTTAT +
Preference number: 4 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHQFFLD*HFDFVY
Trigger: ATAAACGAAGTCGAAGTGGCAGTCAAGGAAGAACTG...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR GCA 90 bp CACAAGAAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTCCCAATCCCAGTCTATaGATTTCTCCAAAATTCACT +
Preference number: 4 (lower is better)
Translates to: HKKSNVVTIIELSIEVIVPNPSL*ISPKFT
Trigger: AGTGAATTTTGGAGAAATGCATAGACTGGGATTGGG...AACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTTCTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR GCA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATATTATTGATTACCACATaGCCAATCCCAGTCTATGCA +
Preference number: 4 (lower is better)
Translates to: TSLYTKCDSTDVSSISTILLITT*PIPVYA
Trigger: TGCATAGACTGGGATTGGGCATGTGGTAATCAATAA...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTCACAAAGTAGTAGACTaGGTAGACATAGGGACAATA +
Preference number: 4 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAHKVVD*VDIGTI
Trigger: TATTGTCCCTATGTCTACCCAGTCTACTACTTTGTG...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
3UTR CAA 72 bp AGTGGTACATATGTTAAGCCCACATATGGAGGACTCTaGCAAGTGTACTCGTTTGCTCCATTTAACATTTTT +
Preference number: 4 (lower is better)
Translates to: SGTYVKPTYGGL*QVYSFAPFNIF
Trigger: AAAAATGTTAAATGGAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTACCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR TCA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAATGCAAGTGGGAATACTaGTATTTGGAAGAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQCKWEY*YLEEAR
Trigger: TCTAGCTTCTTCCAAATATCAGTATTCCCACTTGCA...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CCA 90 bp CACAAGAAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTAAGCGCTCTAATATATaGAGAGTCTGTGTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: HKKSNVVTIIELSIEVIVKRSNI*RVCVCY
Trigger: ATAACACACACAGACTCTCCATATATTAGAGCGCTT...AACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTTCTTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR CCA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAAGGGAATACTGATATTTaGAAGAAGCTAGAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQGNTDI*KKLEGE
Trigger: TTCACCCTCTAGCTTCTTCCAAATATCAGTATTCCC...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATTCTTGTTCTATACTTTaGCTCCTTCGACGATCATGT +
Preference number: 4 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHSCSIL*LLRRSC
Trigger: ACATGATCGTCGAAGGAGCCAAAGTATAGAACAAGA...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp CACAAGAAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTCACCAATGCAATAAATaGAATTACAAAGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: HKKSNVVTIIELSIEVIVHQCNK*NYKGTS
Trigger: GGAAGTGCCTTTGTAATTCCATTTATTGCATTGGTG...AACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTTCTTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
3UTR CAA 72 bp AAGAATGTTAATCCTACAATGCTGCCTTCTTGTACATaGGCAGCACATACTTCTCCTATAATAGACATCCAA +
Preference number: 4 (lower is better)
Translates to: KNVNPTMLPSCT*AAHTSPIIDIQ
Trigger: TTGGATGTCTATTATAGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CCA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAAAAGCGCTCTAATATATaGAGAGTCTGTGTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQKRSNI*RVCVCY
Trigger: ATAACACACACAGACTCTCCATATATTAGAGCGCTT...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CCA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATCACCAATGCAATAAATaGAATTACAAAGGCACTTCC +
Preference number: 4 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHHQCNK*NYKGTS
Trigger: GGAAGTGCCTTTGTAATTCCATTTATTGCATTGGTG...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS GCA 90 bp AGGTTCATGGTCTTCTCGTTGCCCCAGAGCGGGAGCACATTGCCCTaGTTGCCGGAGACCGCCGGCTTGGTAGCGCCGCCGCCGCCGCAC +
Preference number: 5 (lower is better)
Translates to: RFMVFSLPQSGSTLP*LPETAGLVAPPPPH
Trigger: GTGCGGCGGCGGCGGCGCTACCAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCTGGGGCAACGAGAAGACCATGAACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS GCA 90 bp ACCCTACTCCATCGAACGTCGTCGGGAGAAGGGGCCGCCTCGCTGTaGCCCAGCTGGGCAAGAGAGGGCACCCGACGCCGACAAAATGAC +
Preference number: 5 (lower is better)
Translates to: TLLHRTSSGEGAASL*PSWAREGTRRRQND
Trigger: GTCATTTTGTCGGCGTCGGGTGCCCTCTCTTGCCCAGCTGGGGCACAGCGAGGCGGCCCCTTCTCCCGACGACGTTCGATGGAGTAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS GCA 90 bp GACTTCGACTGCGACTTCTATGCCTTTCCCTACTTCTGCTGCGCCTaGGTTCTAACCCCCGGTCAATACTTCGGGATCTTCGCCGTTCTT +
Preference number: 5 (lower is better)
Translates to: DFDCDFYAFPYFCCA*VLTPGQYFGIFAVL
Trigger: AAGAACGGCGAAGATCCCGAAGTATTGACCGGGGGTTAGAACGCAGGCGCAGCAGAAGTAGGGAAAGGCATAGAAGTCGCAGTCGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS GCA 90 bp TATCACGACTTCGACTGCGACTTCTATGCCTTTCCCTACTTCTGCTaGGCCTGCGTTCTAACCCCCGGTCAATACTTCGGGATCTTCGCC +
Preference number: 5 (lower is better)
Translates to: YHDFDCDFYAFPYFC*ACVLTPGQYFGIFA
Trigger: GGCGAAGATCCCGAAGTATTGACCGGGGGTTAGAACGCAGGCGCAGCAGAAGTAGGGAAAGGCATAGAAGTCGCAGTCGAAGTCGTGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS GCA 90 bp TCCCTTCTATCCCCTTTCCTATCACGACTTCGACTGCGACTTCTATaGCTTTCCCTACTTCTGCTGCGCCTGCGTTCTAACCCCCGGTCA +
Preference number: 5 (lower is better)
Translates to: SLLSPFLSRLRLRLL*LSLLLLRLRSNPRS
Trigger: TGACCGGGGGTTAGAACGCAGGCGCAGCAGAAGTAGGGAAAGGCATAGAAGTCGCAGTCGAAGTCGTGATAGGAAAGGGGATAGAAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACTGCTGCGGCTGCGAGTaGCCTGTCAGCGCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHCCGCE*PVSAGL
Trigger: CAGCCCCGCGCTGACAGGCAACTCGCAGCCGCAGCA...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS GCA 90 bp TCCTATCACGACTTCGACTGCGACTTCTATGCCTTTCCCTACTTCTaGTGCGCCTGCGTTCTAACCCCCGGTCAATACTTCGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: SYHDFDCDFYAFPYF*CACVLTPGQYFGIF
Trigger: GAAGATCCCGAAGTATTGACCGGGGGTTAGAACGCAGGCGCAGCAGAAGTAGGGAAAGGCATAGAAGTCGCAGTCGAAGTCGTGATAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS GCA 90 bp CTCGATCCCTGTCCCTTCTATCCCCTTTCCTATCACGACTTCGACTaGGACTTCTATGCCTTTCCCTACTTCTGCTGCGCCTGCGTTCTA +
Preference number: 5 (lower is better)
Translates to: LDPCPFYPLSYHDFD*DFYAFPYFCCACVL
Trigger: TAGAACGCAGGCGCAGCAGAAGTAGGGAAAGGCATAGAAGTCGCAGTCGAAGTCGTGATAGGAAAGGGGATAGAAGGGACAGGGATCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp ATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCCTATGCTGCGGCTGCGAGTaGCCTGTCAGCGCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: MLILQCCLLVHWQHILLLCCGCE*PVSAGL
Trigger: CAGCCCCGCGCTGACAGGCAACTCGCAGCCGCAGCA...TAGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp CTCATCTGCCCCACCCTCTCCCCATTACATGTTAGTATAGGGTTCTGCAAGAATCTGTTGTTAGCCATGTaGCGGCGGAAGGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: LICPTLSPLHVSIGFCKNLLLAM*RRKEGG
Trigger: CCCTCCTTCCTTCCGCCGCAACATGGCTAACAACAG...ATTCTTGCAGAACCCTATACTAACATGTAATGGGGAGAGGGTGGGGCAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp AATGCAGCCTACAGGGAGAGCTTGAGGAGTGCGAACTACTGCACAATCTCAACGGACTCAGAGATCTCCTaGGAGACCTTGAACGTCTGC +
Preference number: 5 (lower is better)
Translates to: NAAYRESLRSANYCTISTDSEIS*ETLNVC
Trigger: GCAGACGTTCAAGGTCTCCAAGGAGATCTCTGAGTC...CGTTGAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGCTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS TCA 90 bp AAAACTAGAAGACCCATGGCCCTCCCGATGATGACTTCTACTTCTTaGCCTTCTTGGGGACCTCCGTGGACTCAGAGATCTCCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: KTRRPMALPMMTSTS*PSWGPPWTQRSPWR
Trigger: TCTCCAAGGAGATCTCTGAGTCCACGGAGGTCCCCAAGAAGGTCAAGAAGTAGAAGTCATCATCGGGAGGGCCATGGGTCTTCTAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370021.1
ENST00000370025.9
ENST00000485810.1
CDS-3UTR CAA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAATGCTGCGGCTGCGAGTaGCCTGTCAGCGCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQCCGCE*PVSAGL
Trigger: CAGCCCCGCGCTGACAGGCAACTCGCAGCCGCAGCA...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CAA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGGGCGACGACAGGATGTaGGTCAGGATCATGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLGDDRM*VRIMGL
Trigger: CAACCCCATGATCCTGACCAACATCCTGTCGTCGCC...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTGTTGTTAGCCATGTaGCGGCGGAAGGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: LASITSEIKQTSMCVPGSLLLAM*RRKEGG
Trigger: CCCTCCTTCCTTCCGCCGCAACATGGCTAACAACAG...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATAGTCAGCGCGGGGCTGTaGTTAGCCATGTTGCGGCGG +
Preference number: 5 (lower is better)
Translates to: TSLYTKCDSTDVSSISTIVSAGL*LAMLRR
Trigger: CCGCCGCAACATGGCTAACAACAGCCCCGCGCTGAC...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTGTCAGCGCGGGGCTGTaGTTAGCCATGTTGCGGCGG +
Preference number: 5 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAVSAGL*LAMLRR
Trigger: CCGCCGCAACATGGCTAACAACAGCCCCGCGCTGAC...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CAA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATAAGCACATTGCCCTGCTaGCCGGAGACCGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: TSLYTKCDSTDVSSISTISTLPC*PETAGL
Trigger: CAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCT...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp AAGAATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCAGAGCGGGAGCACATaGCCCTGCTTGCCGGAGACC +
Preference number: 5 (lower is better)
Translates to: KNVNPTMLPSCTLAAHTSQSGST*PCLPET
Trigger: GGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCTG...AGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp AATGCAGCCTACAGGGAGAGCTTGAGGAGTGCGAACTACTGCACAATCTCAACGCTACTTCTCTGTTCCTaGGACCTTTCTCTTGATCGC +
Preference number: 5 (lower is better)
Translates to: NAAYRESLRSANYCTISTLLLCS*DLSLDR
Trigger: GCGATCAAGAGAAAGGTCCAAGGAACAGAGAAGTAG...CGTTGAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGCTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCGCCTACAGGGAGAGCTaGAGGAGTGCGAACTACTGC +
Preference number: 5 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLAYRES*RSANYC
Trigger: GCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGC...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS CCA 90 bp CCCGGTCAATACTTCGGGATCTTCGCCGTTCTTTCTCCCTTTCTTTaGCTTCACGCTCTAGTCGCTGGCGTTCTTTCTCTCTTTCTAATT +
Preference number: 5 (lower is better)
Translates to: PGQYFGIFAVLSPFL*LHALVAGVLSLFLI
Trigger: AATTAGAAAGAGAGAAAGAACGCCAGCGACTAGAGCGTGAAGCCAAAGAAAGGGAGAAAGAACGGCGAAGATCCCGAAGTATTGACCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370021.1
ENST00000370025.9
ENST00000485810.1
CDS-3UTR CAA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATAGCACATTGCCCTGCTaGCCGGAGACCGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHSTLPC*PETAGL
Trigger: CAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCT...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAAAGCACATTGCCCTGCTaGCCGGAGACCGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQSTLPC*PETAGL
Trigger: CAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCT...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CAA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAACAGAGCGGGAGCACATaGCCCTGCTTGCCGGAGACC +
Preference number: 5 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQQSGST*PCLPET
Trigger: GGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCTG...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CAA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATCAGAGCGGGAGCACATaGCCCTGCTTGCCGGAGACC +
Preference number: 5 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHQSGST*PCLPET
Trigger: GGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCTG...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp AGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCACTACACGCCTACAGGGAGAGCTaGAGGAGTGCGAACTACTGC +
Preference number: 5 (lower is better)
Translates to: SITSEIKQTSMCVPGSLHAYRES*RSANYC
Trigger: GCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGC...GTGTAGTGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp AATGCAGCCTACAGGGAGAGCTTGAGGAGTGCGAACTACTGCACAATCTCAACGTACAATGCTGCCTTCTaGTACATTGGCAGCACATAC +
Preference number: 5 (lower is better)
Translates to: NAAYRESLRSANYCTISTYNAAF*YIGSTY
Trigger: GTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTA...CGTTGAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGCTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS GCA 90 bp ATTGTCTCTGAAAAGGGTCATTACCGCATGAAGGCCTTCTTGCTATaGCCTCTCACAGCTCAGGACATGTTAGTCAGCTATTGTCAGTCC +
Preference number: 5 (lower is better)
Translates to: IVSEKGHYRMKAFLL*PLTAQDMLVSYCQS
Trigger: GGACTGACAATAGCTGACTAACATGTCCTGAGCTGTGAGAGGGCATAGCAAGAAGGCCTTCATGCGGTAATGACCCTTTTCAGAGACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485810.1
CDS-3UTR CAA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCTACTTCTTGACCTTCTaGGGGACCTCCGTGGACTCA +
Preference number: 5 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLYFLTF*GTSVDS
Trigger: TGAGTCCACGGAGGTCCCCAAGAAGGTCAAGAAGTA...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp AATGCAGCCTACAGGGAGAGCTTGAGGAGTGCGAACTACTGCACAATCTCAACGTTGTGGGAACGTTCTTaGCTTCTACTACGCTTTCTA +
Preference number: 5 (lower is better)
Translates to: NAAYRESLRSANYCTISTLWERS*LLLRFL
Trigger: TAGAAAGCGTAGTAGAAGCAAAGAACGTTCCCACAA...CGTTGAGATTGTGCAGTAGTTCGCACTCCTCAAGCTCTCCCTGTAGGCTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATATTCATGGTCTTCTCGTaGCCCCAGAGCGGGAGCACA +
Preference number: 5 (lower is better)
Translates to: TSLYTKCDSTDVSSISTIFMVFS*PQSGST
Trigger: TGTGCTCCCGCTCTGGGGCAACGAGAAGACCATGAA...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTTTCATGGTCTTCTCGTaGCCCCAGAGCGGGAGCACA +
Preference number: 5 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAFMVFS*PQSGST
Trigger: TGTGCTCCCGCTCTGGGGCAACGAGAAGACCATGAA...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CAA 90 bp CACAAGAAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTTTCATGGTCTTCTCGTaGCCCCAGAGCGGGAGCACA +
Preference number: 5 (lower is better)
Translates to: HKKSNVVTIIELSIEVIVFMVFS*PQSGST
Trigger: TGTGCTCCCGCTCTGGGGCAACGAGAAGACCATGAA...AACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTTCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR CAA 90 bp ATGAACCTTAAAACACAAAGTAGTAGACTGGGTAGACATAGGGACAATACAGCTGGCGACGACAGGATGTaGGTCAGGATCATGGGGTTG +
Preference number: 5 (lower is better)
Translates to: MNLKTQSSRLGRHRDNTAGDDRM*VRIMGL
Trigger: CAACCCCATGATCCTGACCAACATCCTGTCGTCGCC...AGCTGTATTGTCCCTATGTCTACCCAGTCTACTACTTTGTGTTTTAAGGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CAA 90 bp CAGATACATGTGCAGAACGTGCCGGTTTGTTACCTAGATATACATGTACCTTGGACTGTCAGTTCTTCCTaGACTGCCACTTCGACTTCG +
Preference number: 5 (lower is better)
Translates to: QIHVQNVPVCYLDIHVPWTVSSS*TATSTS
Trigger: CGAAGTCGAAGTGGCAGTCAAGGAAGAACTGACAGT...CCAAGGTACATGTATATCTAGGTAACAAACCGGCACGTTCTGCACATGTATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR CAA 90 bp CTCATCTGCCCCACCCTCTCCCCATTACATGTTAGTATAGGGTTCTGCAAGAATCTTCGACGATCATGTTaGTCTGACTGGTCCTTACTA +
Preference number: 5 (lower is better)
Translates to: LICPTLSPLHVSIGFCKNLRRSC*SDWSLL
Trigger: TAGTAAGGACCAGTCAGACAAACATGATCGTCGAAG...ATTCTTGCAGAACCCTATACTAACATGTAATGGGGAGAGGGTGGGGCAGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp CTCATCTGCCCCACCCTCTCCCCATTACATGTTAGTATAGGGTTCTGCAAGAATCTCTTGTTCTATACTTaGGCTCCTTCGACGATCATG +
Preference number: 5 (lower is better)
Translates to: LICPTLSPLHVSIGFCKNLLFYT*APSTIM
Trigger: CATGATCGTCGAAGGAGCCAAAGTATAGAACAAGAG...ATTCTTGCAGAACCCTATACTAACATGTAATGGGGAGAGGGTGGGGCAGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp TCACTTGTCATCTGGGCACTAAGACATCCCTGTACACAAAGTGTGACTCTACTGCTGCCTTCTTGTACATaGGCAGCACATACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: SLVIWALRHPCTQSVTLLLPSCT*AAHTSP
Trigger: AGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAG...CAGTAGAGTCACACTTTGTGTACAGGGATGTCTTAGTGCCCAGATGACAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp CACAAGAAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTAGTTCGGAGGATCACTaGAGCCAGGGAAGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: HKKSNVVTIIELSIEVIVSSEDH*SQGSGG
Trigger: GCCTCCACTTCCCTGGCTCAAGTGATCCTCCGAACT...AACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTTCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS TCA 90 bp GCTCTCTTGTTCTATACTTTGGCTCCTTCGACGATCATGTTTGTCTaGCTGGTCCTTACTATCACTGTGATCTCGTTTGTGGGAACGTTC +
Preference number: 5 (lower is better)
Translates to: ALLFYTLAPSTIMFV*LVLTITVISFVGTF
Trigger: GAACGTTCCCACAAACGAGATCACAGTGATAGTAAGGACCAGTCAGACAAACATGATCGTCGAAGGAGCCAAAGTATAGAACAAGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS CCA 90 bp CTTCGCCGTTCTTTCTCCCTTTCTTTGGCTTCACGCTCTAGTCGCTaGCGTTCTTTCTCTCTTTCTAATTCTCTGTCAAAACTAGAAGAC +
Preference number: 5 (lower is better)
Translates to: LRRSFSLSLASRSSR*RSFSLSNSLSKLED
Trigger: GTCTTCTAGTTTTGACAGAGAATTAGAAAGAGAGAAAGAACGCCAGCGACTAGAGCGTGAAGCCAAAGAAAGGGAGAAAGAACGGCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370021.1
ENST00000370025.9
ENST00000485810.1
CDS-3UTR CAA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAACTGTTGTTAGCCATGTaGCGGCGGAAGGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQLLLAM*RRKEGG
Trigger: CCCTCCTTCCTTCCGCCGCAACATGGCTAACAACAG...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CAA 90 bp ATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCCTAGTCAGGATCATGGGGTaGAGGTTCATGGTCTTCTCG +
Preference number: 5 (lower is better)
Translates to: MLILQCCLLVHWQHILLLVRIMG*RFMVFS
Trigger: CGAGAAGACCATGAACCTCAACCCCATGATCCTGAC...TAGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp AAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTCTTTCAGGCGACGACAGGATGTaGGTCAGGATCATGGGGTTG +
Preference number: 5 (lower is better)
Translates to: KSNVVTIIELSIEVIVLSGDDRM*VRIMGL
Trigger: CAACCCCATGATCCTGACCAACATCCTGTCGTCGCC...TGAAAGAACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR CAA 90 bp CAGATACATGTGCAGAACGTGCCGGTTTGTTACCTAGATATACATGTACCTTGGATCTCCTTGGAGACCTaGAACGTCTGCGTTCAACAT +
Preference number: 5 (lower is better)
Translates to: QIHVQNVPVCYLDIHVPWISLET*NVCVQH
Trigger: ATGTTGAACGCAGACGTTCAAGGTCTCCAAGGAGAT...CCAAGGTACATGTATATCTAGGTAACAAACCGGCACGTTCTGCACATGTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS TCA 90 bp CTCCTTCGACGATCATGTTTGTCTGACTGGTCCTTACTATCACTGTaGTCTCGTTTGTGGGAACGTTCTTTGCTTCTACTACGCTTTCTA +
Preference number: 5 (lower is better)
Translates to: LLRRSCLSDWSLLSL*SRLWERSLLLLRFL
Trigger: TAGAAAGCGTAGTAGAAGCAAAGAACGTTCCCACAAACGAGATCACAGTGATAGTAAGGACCAGTCAGACAAACATGATCGTCGAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATAGACTCAGAGATCTCCTaGGAGACCTTGAACGTCTGC +
Preference number: 5 (lower is better)
Translates to: TSLYTKCDSTDVSSISTIDSEIS*ETLNVC
Trigger: GCAGACGTTCAAGGTCTCCAAGGAGATCTCTGAGTC...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp ATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCCTAACTGTCAGTTCTTCCTaGACTGCCACTTCGACTTCG +
Preference number: 5 (lower is better)
Translates to: MLILQCCLLVHWQHILLLTVSSS*TATSTS
Trigger: CGAAGTCGAAGTGGCAGTCAAGGAAGAACTGACAGT...TAGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCACATATGGAGGACTCTaGCAAGTGTACTCGTTTGCT +
Preference number: 5 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLTYGGL*QVYSFA
Trigger: AGCAAACGAGTACACTTGCAAGAGTCCTCCATATGT...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAAGTCAGGATCATGGGGTaGAGGTTCATGGTCTTCTCG +
Preference number: 5 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQVRIMG*RFMVFS
Trigger: CGAGAAGACCATGAACCTCAACCCCATGATCCTGAC...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CAA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCATCCTTCCCATCTTTCTaGATTTTTCTAGGTCGGGTT +
Preference number: 5 (lower is better)
Translates to: LASITSEIKQTSMCVPGSSFPSF*IFLGRV
Trigger: AACCCGACCTAGAAAAATCAAGAAAGATGGGAAGGA...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCTCCTTCCCATCTTTCTaGATTTTTCTAGGTCGGGTT +
Preference number: 5 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLSFPSF*IFLGRV
Trigger: AACCCGACCTAGAAAAATCAAGAAAGATGGGAAGGA...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp AAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTCTTTCATACTTCTTGACCTTCTaGGGGACCTCCGTGGACTCA +
Preference number: 5 (lower is better)
Translates to: KSNVVTIIELSIEVIVLSYFLTF*GTSVDS
Trigger: TGAGTCCACGGAGGTCCCCAAGAAGGTCAAGAAGTA...TGAAAGAACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR CAA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATAGATGACTTCTACTTCTaGACCTTCTTGGGGACCTCC +
Preference number: 5 (lower is better)
Translates to: TSLYTKCDSTDVSSISTIDDFYF*TFLGTS
Trigger: GGAGGTCCCCAAGAAGGTCAAGAAGTAGAAGTCATC...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp CACAAGAAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTGATGACTTCTACTTCTaGACCTTCTTGGGGACCTCC +
Preference number: 5 (lower is better)
Translates to: HKKSNVVTIIELSIEVIVDDFYF*TFLGTS
Trigger: GGAGGTCCCCAAGAAGGTCAAGAAGTAGAAGTCATC...AACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTTCTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS-3UTR CAA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATATCTTTCTCCCTTTCTTaGGCTTCACGCTCTAGTCGC +
Preference number: 5 (lower is better)
Translates to: TSLYTKCDSTDVSSISTISFSLS*ASRSSR
Trigger: GCGACTAGAGCGTGAAGCCAAAGAAAGGGAGAAAGA...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp AAGAATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTTCTTTCTCCCTTTCTTaGGCTTCACGCTCTAGTCGC +
Preference number: 5 (lower is better)
Translates to: KNVNPTMLPSCTLAAHTSSFSLS*ASRSSR
Trigger: GCGACTAGAGCGTGAAGCCAAAGAAAGGGAGAAAGA...AGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp CTCATCTGCCCCACCCTCTCCCCATTACATGTTAGTATAGGGTTCTGCAAGAATTGCAAGTGTACTCGTTaGCTCCATTTAACATTTTTG +
Preference number: 5 (lower is better)
Translates to: LICPTLSPLHVSIGFCKNCKCTR*LHLTFL
Trigger: CAAAAATGTTAAATGGAGCAAACGAGTACACTTGCA...ATTCTTGCAGAACCCTATACTAACATGTAATGGGGAGAGGGTGGGGCAGATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCTTTCTAGATTTTTCTTaGCTGGGACTATGTTCCCGT +
Preference number: 5 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLFLDFS*LGLCSR
Trigger: ACGGGAACATAGTCCCAGCAAAGAAAAATCTAGAAA...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp GTACATATGTTAAGCCCACATATGGAGGACTCTTGCAAGTGTACTCGTTTGCTCTTTTTCTTGGCTCTCTaGTTCTATACTTTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: VHMLSPHMEDSCKCTRLLFFLAL*FYTLAP
Trigger: AGGAGCCAAAGTATAGAACAAGAGAGCCAAGAAAAA...GAGCAAACGAGTACACTTGCAAGAGTCCTCCATATGTGGGCTTAACATATGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp TTGGCCAGTATAACCAGTGAGATAAAACAAACCTCAATGTGCGTGCCAGGTTCATTTTTCTTGGCTCTCTaGTTCTATACTTTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: LASITSEIKQTSMCVPGSFFLAL*FYTLAP
Trigger: AGGAGCCAAAGTATAGAACAAGAGAGCCAAGAAAAA...TGAACCTGGCACGCACATTGAGGTTTGTTTTATCTCACTGGTTATACTGGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp ATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTCCTAACATATGGAGGACTCTaGCAAGTGTACTCGTTTGCT +
Preference number: 5 (lower is better)
Translates to: MLILQCCLLVHWQHILLLTYGGL*QVYSFA
Trigger: AGCAAACGAGTACACTTGCAAGAGTCCTCCATATGT...TAGGAGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAAGCAGTGGCAATGATCTaGGCTCACAGCAAATTCTGT +
Preference number: 5 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQAVAMI*AHSKFC
Trigger: ACAGAATTTGCTGTGAGCCAAGATCATTGCCACTGC...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CAA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATATCTCCTTGGAGACCTaGAACGTCTGCGTTCAACAT +
Preference number: 5 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHISLET*NVCVQH
Trigger: ATGTTGAACGCAGACGTTCAAGGTCTCCAAGGAGAT...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATCTACTTCTCTGTTCCTaGGACCTTTCTCTTGATCGC +
Preference number: 5 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHLLLCS*DLSLDR
Trigger: GCGATCAAGAGAAAGGTCCAAGGAACAGAGAAGTAG...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATACTTCGACGATCATGTTaGTCTGACTGGTCCTTACTA +
Preference number: 5 (lower is better)
Translates to: TSLYTKCDSTDVSSISTILRRSC*SDWSLL
Trigger: TAGTAAGGACCAGTCAGACAAACATGATCGTCGAAG...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS CCA 90 bp AACTCTTCAATTCTGCACTTCTATGCAAGTGGGAATACTGATATTTaGAAGAAGCTAGAGGGTGAAGAACTCTTCATCATCAAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: NSSILHFYASGNTDI*KKLEGEELFIIKEG
Trigger: TCCTTCCTTGATGATGAAGAGTTCTTCACCCTCTAGCTTCTTCCAAATATCAGTATTCCCACTTGCATAGAAGTGCAGAATTGAAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CAA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATCTCTTGTTCTATACTTaGGCTCCTTCGACGATCATG +
Preference number: 5 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHLLFYT*APSTIM
Trigger: CATGATCGTCGAAGGAGCCAAAGTATAGAACAAGAG...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp AAATCAAATGTAGTGACGATCATCGAACTGTCAATCGAGGTGATAGTTCTTTCATACAATGCTGCCTTCTaGTACATTGGCAGCACATAC +
Preference number: 5 (lower is better)
Translates to: KSNVVTIIELSIEVIVLSYNAAF*YIGSTY
Trigger: GTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTA...TGAAAGAACTATCACCTCGATTGACAGTTCGATGATCGTCACTACATTTGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370025.9
CDS CCA 90 bp GGGCTGTGTATATCTTATATACATAAATCCAAGCGCTCTAATATATaGAGAGTCTGTGTGTGTTATAAGACCCATCACTTGCTTTCGAGT +
Preference number: 5 (lower is better)
Translates to: GLCISYIHKSKRSNI*RVCVCYKTHHLLSS
Trigger: ACTCGAAAGCAAGTGATGGGTCTTATAACACACACAGACTCTCCATATATTAGAGCGCTTGGATTTATGTATATAAGATATACACAGCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS-3UTR CAA 90 bp AAGAATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTTTTCTAGATTTTTCTTaGCTGGGACTATGTTCCCGT +
Preference number: 5 (lower is better)
Translates to: KNVNPTMLPSCTLAAHTSFLDFS*LGLCSR
Trigger: ACGGGAACATAGTCCCAGCAAAGAAAAATCTAGAAA...AGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp GAAAAGCCAAGACCCAGGATAAAGGATTTAATCCAGTATTTATTCCACACTCATTTGTGGGAACGTTCTTaGCTTCTACTACGCTTTCTA +
Preference number: 5 (lower is better)
Translates to: EKPRPRIKDLIQYLFHTHLWERS*LLLRFL
Trigger: TAGAAAGCGTAGTAGAAGCAAAGAACGTTCCCACAA...ATGAGTGTGGAATAAATACTGGATTAAATCCTTTATCCTGGGTCTTGGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp ACATCCCTGTACACAAAGTGTGACTCTACTGACGTTTCATCAATTTCCACAATAAAATGCTTTGGAAGCTaGAGGCTTGAATCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: TSLYTKCDSTDVSSISTIKCFGS*RLESVS
Trigger: AGAAACAGATTCAAGCCTCAAGCTTCCAAAGCATTT...TATTGTGGAAATTGATGAAACGTCAGTAGAGTCACACTTTGTGTACAGGGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS-3UTR CAA 90 bp AAGAATGTTAATCCTACAATGCTGCCTTCTTGTACATTGGCAGCACATACTTCTTGCAAGTGTACTCGTTaGCTCCATTTAACATTTTTG +
Preference number: 5 (lower is better)
Translates to: KNVNPTMLPSCTLAAHTSCKCTR*LHLTFL
Trigger: CAAAAATGTTAAATGGAGCAAACGAGTACACTTGCA...AGAAGTATGTGCTGCCAATGTACAAGAAGGCAGCATTGTAGGATTAACATTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS GCA 90 bp GCTCTAATATATGGAGAGTCTGTGTGTGTTATAAGACCCATCACTTaGTTTCGAGTTAACTTCAGGGTAAATAATTTGTATAACAGGCAA +
Preference number: 5 (lower is better)
Translates to: ALIYGESVCVIRPIT*FRVNFRVNNLYNRQ
Trigger: TTGCCTGTTATACAAATTATTTACCCTGAAGTTAACTCGAAAGCAAGTGATGGGTCTTATAACACACACAGACTCTCCATATATTAGAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS-3UTR CAA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAATTCATTTTTGACATGTaGGACTTCACCATGCAAGTA +
Preference number: 5 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQFIFDM*DFTMQV
Trigger: TACTTGCATGGTGAAGTCCAACATGTCAAAAATGAA...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS-3UTR CAA 90 bp TTTGTCACCTTGAACAAGTCATCCAAACACTTAGCCTATTTATGTAACACCCAACTCATCATTTCATTTTaGACATGTTGGACTTCACCA +
Preference number: 5 (lower is better)
Translates to: FVTLNKSSKHLAYLCNTQLIISF*TCWTSP
Trigger: TGGTGAAGTCCAACATGTCAAAAATGAAATGATGAG...TTGGGTGTTACATAAATAGGCTAAGTGTTTGGATGACTTGTTCAAGGTGACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS GCA 72 bp GCCGCCGCCGCACTGCTGCTGTTGCTGAGCCGCAGCTaGAGCCGCCTGGTGCTGCGGCTGCGAGTTGCCTGT +
Preference number: 6 (lower is better)
Translates to: AAAALLLLLSRS*SRLVLRLRVAC
Trigger: ACAGGCAACTCGCAGCCGCAGCACCAGGCGGCTGCAGCTGCGGCTCAGCAACAGCAGCAGTGCGGCGGCGGC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS CAA 72 bp GGGAGCACATTGCCCTGCTTGCCGGAGACCGCCGGCTaGGTAGCGCCGCCGCCGCCGCACTGCTGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: GSTLPCLPETAG*VAPPPPHCCCC
Trigger: GCAACAGCAGCAGTGCGGCGGCGGCGGCGCTACCAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS GCA 72 bp CATCGAACGTCGTCGGGAGAAGGGGCCGCCTCGCTGTaGCCCAGCTGGGCAAGAGAGGGCACCCGACGCCGA +
Preference number: 6 (lower is better)
Translates to: HRTSSGEGAASL*PSWAREGTRRR
Trigger: TCGGCGTCGGGTGCCCTCTCTTGCCCAGCTGGGGCACAGCGAGGCGGCCCCTTCTCCCGACGACGTTCGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS CAA 72 bp TTCTCGTTGCCCCAGAGCGGGAGCACATTGCCCTGCTaGCCGGAGACCGCCGGCTTGGTAGCGCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: FSLPQSGSTLPC*PETAGLVAPPP
Trigger: CGGCGGCGGCGCTACCAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCTGGGGCAACGAGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS CAA 90 bp TTCATGGTCTTCTCGTTGCCCCAGAGCGGGAGCACATTGCCCTGCTaGCCGGAGACCGCCGGCTTGGTAGCGCCGCCGCCGCCGCACTGC +
Preference number: 6 (lower is better)
Translates to: FMVFSLPQSGSTLPC*PETAGLVAPPPPHC
Trigger: GCAGTGCGGCGGCGGCGGCGCTACCAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCTGGGGCAACGAGAAGACCATGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS GCA 72 bp GTCTTCTCGTTGCCCCAGAGCGGGAGCACATTGCCCTaGTTGCCGGAGACCGCCGGCTTGGTAGCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: VFSLPQSGSTLP*LPETAGLVAPP
Trigger: CGGCGGCGCTACCAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCTGGGGCAACGAGAAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS CAA 90 bp GGGTTGAGGTTCATGGTCTTCTCGTTGCCCCAGAGCGGGAGCACATaGCCCTGCTTGCCGGAGACCGCCGGCTTGGTAGCGCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: GLRFMVFSLPQSGST*PCLPETAGLVAPPP
Trigger: CGGCGGCGGCGCTACCAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCTGGGGCAACGAGAAGACCATGAACCTCAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS CAA 72 bp TGCTGCGGCTGCGAGTTGCCTGTCAGCGCGGGGCTGTaGTTAGCCATGTTGCGGCGGAAGGAAGGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: CCGCELPVSAGL*LAMLRRKEGGR
Trigger: CCTCCCTCCTTCCTTCCGCCGCAACATGGCTAACAACAGCCCCGCGCTGACAGGCAACTCGCAGCCGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS TCA 72 bp CAGCTGGGCAAGAGAGGGCACCCGACGCCGACAAAATaGCCCCGGGCCAAGAGCAGACAGCGAAACCCAGAC +
Preference number: 6 (lower is better)
Translates to: QLGKRGHPTPTK*PRAKSRQRNPD
Trigger: GTCTGGGTTTCGCTGTCTGCTCTTGGCCCGGGGTCATTTTGTCGGCGTCGGGTGCCCTCTCTTGCCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS CAA 72 bp TTCATGGTCTTCTCGTTGCCCCAGAGCGGGAGCACATaGCCCTGCTTGCCGGAGACCGCCGGCTTGGTAGCG +
Preference number: 6 (lower is better)
Translates to: FMVFSLPQSGST*PCLPETAGLVA
Trigger: CGCTACCAAGCCGGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCTGGGGCAACGAGAAGACCATGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS CCA 72 bp GGGCCAAGCTCGATCTCGCTCTTCGGGACAACGGTCTaGGACCCTACTCCATCGAACGTCGTCGGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: GPSSISLFGTTV*DPTPSNVVGRR
Trigger: CCTTCTCCCGACGACGTTCGATGGAGTAGGGTCCCAGACCGTTGTCCCGAAGAGCGAGATCGAGCTTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS CCA 72 bp CCATGGTTCAACGTGCGTGACCTCTACCTGCGACCCTaGGCTGCTCCGAGCCTCGCTGCAAGACTGAGTCAA +
Preference number: 6 (lower is better)
Translates to: PWFNVRDLYLRP*AAPSLAARLSQ
Trigger: TTGACTCAGTCTTGCAGCGAGGCTCGGAGCAGCCCAGGGTCGCAGGTAGAGGTCACGCACGTTGAACCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000467302.5
CDS CAA 90 bp AGGATGTTGGTCAGGATCATGGGGTTGAGGTTCATGGTCTTCTCGTaGCCCCAGAGCGGGAGCACATTGCCCTGCTTGCCGGAGACCGCC +
Preference number: 6 (lower is better)
Translates to: RMLVRIMGLRFMVFS*PQSGSTLPCLPETA
Trigger: GGCGGTCTCCGGCAAGCAGGGCAATGTGCTCCCGCTCTGGGGCAACGAGAAGACCATGAACCTCAACCCCATGATCCTGACCAACATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS TCA 72 bp AAGGCGACGACAGGATGTTGGTCAGGATCATGGGGTTaGGGTTCATGGTCTTCTCGTTGCCCCAGAGCGGGA +
Preference number: 6 (lower is better)
Translates to: KATTGCWSGSWG*GSWSSRCPRAG
Trigger: TCCCGCTCTGGGGCAACGAGAAGACCATGAACCTCAACCCCATGATCCTGACCAACATCCTGTCGTCGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS GCA 72 bp CCTCTACCTGCGACCCTGGGCTGCTCCGAGCCTCGCTaGAAGACTGAGTCAATCCTTAAAGTAGATCTCGTC +
Preference number: 6 (lower is better)
Translates to: PLPATLGCSEPR*KTESILKVDLV
Trigger: GACGAGATCTACTTTAAGGATTGACTCAGTCTTGCAGCGAGGCTCGGAGCAGCCCAGGGTCGCAGGTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000467302.5
CDS GCA 72 bp TTCGACTGCGACTTCTATGCCTTTCCCTACTTCTGCTaGGCCTGCGTTCTAACCCCCGGTCAATACTTCGGG +
Preference number: 6 (lower is better)
Translates to: FDCDFYAFPYFC*ACVLTPGQYFG
Trigger: CCCGAAGTATTGACCGGGGGTTAGAACGCAGGCGCAGCAGAAGTAGGGAAAGGCATAGAAGTCGCAGTCGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS TCA 72 bp AGACCCATGGCCCTCCCGATGATGACTTCTACTTCTTaGCCTTCTTGGGGACCTCCGTGGACTCAGAGATCT +
Preference number: 6 (lower is better)
Translates to: RPMALPMMTSTS*PSWGPPWTQRS
Trigger: AGATCTCTGAGTCCACGGAGGTCCCCAAGAAGGTCAAGAAGTAGAAGTCATCATCGGGAGGGCCATGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370021.1
ENST00000370025.9
ENST00000485810.1
CDS GCA 72 bp TGCGACTTCTATGCCTTTCCCTACTTCTGCTGCGCCTaGGTTCTAACCCCCGGTCAATACTTCGGGATCTTC +
Preference number: 6 (lower is better)
Translates to: CDFYAFPYFCCA*VLTPGQYFGIF
Trigger: GAAGATCCCGAAGTATTGACCGGGGGTTAGAACGCAGGCGCAGCAGAAGTAGGGAAAGGCATAGAAGTCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS GCA 72 bp GACTTCGACTGCGACTTCTATGCCTTTCCCTACTTCTaGTGCGCCTGCGTTCTAACCCCCGGTCAATACTTC +
Preference number: 6 (lower is better)
Translates to: DFDCDFYAFPYF*CACVLTPGQYF
Trigger: GAAGTATTGACCGGGGGTTAGAACGCAGGCGCAGCAGAAGTAGGGAAAGGCATAGAAGTCGCAGTCGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS CAA 72 bp AAGACCCATGGCCCTCCCGATGATGACTTCTACTTCTaGACCTTCTTGGGGACCTCCGTGGACTCAGAGATC +
Preference number: 6 (lower is better)
Translates to: KTHGPPDDDFYF*TFLGTSVDSEI
Trigger: GATCTCTGAGTCCACGGAGGTCCCCAAGAAGGTCAAGAAGTAGAAGTCATCATCGGGAGGGCCATGGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370021.1
ENST00000370025.9
ENST00000485810.1
CDS CAA 90 bp AAGACCCATGGCCCTCCCGATGATGACTTCTACTTCTTGACCTTCTaGGGGACCTCCGTGGACTCAGAGATCTCCTTGGAGACCTTGAAC +
Preference number: 6 (lower is better)
Translates to: KTHGPPDDDFYFLTF*GTSVDSEISLETLN
Trigger: GTTCAAGGTCTCCAAGGAGATCTCTGAGTCCACGGAGGTCCCCAAGAAGGTCAAGAAGTAGAAGTCATCATCGGGAGGGCCATGGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370021.1
ENST00000370025.9
ENST00000485810.1
CDS GCA 72 bp TCCCCTTTCCTATCACGACTTCGACTGCGACTTCTATaGCTTTCCCTACTTCTGCTGCGCCTGCGTTCTAAC +
Preference number: 6 (lower is better)
Translates to: SPFLSRLRLRLL*LSLLLLRLRSN
Trigger: GTTAGAACGCAGGCGCAGCAGAAGTAGGGAAAGGCATAGAAGTCGCAGTCGAAGTCGTGATAGGAAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS GCA 72 bp TGTCCCTTCTATCCCCTTTCCTATCACGACTTCGACTaGGACTTCTATGCCTTTCCCTACTTCTGCTGCGCC +
Preference number: 6 (lower is better)
Translates to: CPFYPLSYHDFD*DFYAFPYFCCA
Trigger: GGCGCAGCAGAAGTAGGGAAAGGCATAGAAGTCGCAGTCGAAGTCGTGATAGGAAAGGGGATAGAAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS CCA 72 bp TACTTCGGGATCTTCGCCGTTCTTTCTCCCTTTCTTTaGCTTCACGCTCTAGTCGCTGGCGTTCTTTCTCTC +
Preference number: 6 (lower is better)
Translates to: YFGIFAVLSPFL*LHALVAGVLSL
Trigger: GAGAGAAAGAACGCCAGCGACTAGAGCGTGAAGCCAAAGAAAGGGAGAAAGAACGGCGAAGATCCCGAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370021.1
ENST00000370025.9
ENST00000485810.1
CDS CAA 90 bp CCCCGGTCAATACTTCGGGATCTTCGCCGTTCTTTCTCCCTTTCTTaGGCTTCACGCTCTAGTCGCTGGCGTTCTTTCTCTCTTTCTAAT +
Preference number: 6 (lower is better)
Translates to: PRSILRDLRRSFSLS*ASRSSRWRSFSLSN
Trigger: ATTAGAAAGAGAGAAAGAACGCCAGCGACTAGAGCGTGAAGCCAAAGAAAGGGAGAAAGAACGGCGAAGATCCCGAAGTATTGACCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370021.1
ENST00000370025.9
ENST00000485810.1
CDS CAA 72 bp ATACTTCGGGATCTTCGCCGTTCTTTCTCCCTTTCTTaGGCTTCACGCTCTAGTCGCTGGCGTTCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: ILRDLRRSFSLS*ASRSSRWRSFS
Trigger: AGAGAAAGAACGCCAGCGACTAGAGCGTGAAGCCAAAGAAAGGGAGAAAGAACGGCGAAGATCCCGAAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370021.1
ENST00000370025.9
ENST00000485810.1
CDS CAA 72 bp GTCTCTGAAAAGGGTCATTACCGCATGAAGGCCTTCTaGCTATGCCCTCTCACAGCTCAGGACATGTTAGTC +
Preference number: 6 (lower is better)
Translates to: VSEKGHYRMKAF*LCPLTAQDMLV
Trigger: GACTAACATGTCCTGAGCTGTGAGAGGGCATAGCAAGAAGGCCTTCATGCGGTAATGACCCTTTTCAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485810.1
CDS GCA 72 bp GAAAAGGGTCATTACCGCATGAAGGCCTTCTTGCTATaGCCTCTCACAGCTCAGGACATGTTAGTCAGCTAT +
Preference number: 6 (lower is better)
Translates to: EKGHYRMKAFLL*PLTAQDMLVSY
Trigger: ATAGCTGACTAACATGTCCTGAGCTGTGAGAGGGCATAGCAAGAAGGCCTTCATGCGGTAATGACCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485810.1
CDS CAA 90 bp ATGACCATTGTCTCTGAAAAGGGTCATTACCGCATGAAGGCCTTCTaGCTATGCCCTCTCACAGCTCAGGACATGTTAGTCAGCTATTGT +
Preference number: 6 (lower is better)
Translates to: MTIVSEKGHYRMKAF*LCPLTAQDMLVSYC
Trigger: ACAATAGCTGACTAACATGTCCTGAGCTGTGAGAGGGCATAGCAAGAAGGCCTTCATGCGGTAATGACCCTTTTCAGAGACAATGGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485810.1
CDS TCA 72 bp CGATCATGTTTGTCTGACTGGTCCTTACTATCACTGTaGTCTCGTTTGTGGGAACGTTCTTTGCTTCTACTA +
Preference number: 6 (lower is better)
Translates to: RSCLSDWSLLSL*SRLWERSLLLL
Trigger: TAGTAGAAGCAAAGAACGTTCCCACAAACGAGATCACAGTGATAGTAAGGACCAGTCAGACAAACATGATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS TCA 72 bp TTCTATACTTTGGCTCCTTCGACGATCATGTTTGTCTaGCTGGTCCTTACTATCACTGTGATCTCGTTTGTG +
Preference number: 6 (lower is better)
Translates to: FYTLAPSTIMFV*LVLTITVISFV
Trigger: CACAAACGAGATCACAGTGATAGTAAGGACCAGTCAGACAAACATGATCGTCGAAGGAGCCAAAGTATAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS CCA 72 bp TCTTTCTCCCTTTCTTTGGCTTCACGCTCTAGTCGCTaGCGTTCTTTCTCTCTTTCTAATTCTCTGTCAAAA +
Preference number: 6 (lower is better)
Translates to: SFSLSLASRSSR*RSFSLSNSLSK
Trigger: TTTTGACAGAGAATTAGAAAGAGAGAAAGAACGCCAGCGACTAGAGCGTGAAGCCAAAGAAAGGGAGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370021.1
ENST00000370025.9
ENST00000485810.1
CDS CCA 72 bp TTATGCTGTTTTTCTTGGCTCTCTTGTTCTATACTTTaGCTCCTTCGACGATCATGTTTGTCTGACTGGTCC +
Preference number: 6 (lower is better)
Translates to: LCCFSWLSCSIL*LLRRSCLSDWS
Trigger: GGACCAGTCAGACAAACATGATCGTCGAAGGAGCCAAAGTATAGAACAAGAGAGCCAAGAAAAACAGCATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS CAA 90 bp TCTTTATGTTTCTTCTCTTCTACCTCTCCCCTACTTCTCTGTTCCTaGGACCTTTCTCTTGATCGCTCTCTCTCTTTTTCTCGTTCATTT +
Preference number: 6 (lower is better)
Translates to: SLCFFSSTSPLLLCS*DLSLDRSLSFSRSF
Trigger: AAATGAACGAGAAAAAGAGAGAGAGCGATCAAGAGAAAGGTCCAAGGAACAGAGAAGTAGGGGAGAGGTAGAAGAGAAGAAACATAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370021.1
ENST00000370025.9
CDS CCA 72 bp ATTCTGCACTTCTATGCAAGTGGGAATACTGATATTTaGAAGAAGCTAGAGGGTGAAGAACTCTTCATCATC +
Preference number: 6 (lower is better)
Translates to: ILHFYASGNTDI*KKLEGEELFII
Trigger: GATGATGAAGAGTTCTTCACCCTCTAGCTTCTTCCAAATATCAGTATTCCCACTTGCATAGAAGTGCAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370022.9
CDS GCA 72 bp TATGGAGAGTCTGTGTGTGTTATAAGACCCATCACTTaGTTTCGAGTTAACTTCAGGGTAAATAATTTGTAT +
Preference number: 6 (lower is better)
Translates to: YGESVCVIRPIT*FRVNFRVNNLY
Trigger: ATACAAATTATTTACCCTGAAGTTAACTCGAAAGCAAGTGATGGGTCTTATAACACACACAGACTCTCCATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5
CDS CCA 72 bp ATATCTTATATACATAAATCCAAGCGCTCTAATATATaGAGAGTCTGTGTGTGTTATAAGACCCATCACTTG +
Preference number: 6 (lower is better)
Translates to: ISYIHKSKRSNI*RVCVCYKTHHL
Trigger: CAAGTGATGGGTCTTATAACACACACAGACTCTCCATATATTAGAGCGCTTGGATTTATGTATATAAGATAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370021.1
ENST00000370022.9
ENST00000370025.9
ENST00000467302.5