Pregenerated sensors for PRPF38A (Homo sapiens)
Ensembl gene IDs: ENSG00000134748Ensembl transcript IDs: ENST00000257181.10
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTTGGAACACATCTCCCTTACTTTCTTAGTATTAAAAGGCGATTGTaGCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCAAATTATTGG | + |
Preference number: 1 (lower is better) Translates to: LGTHLPYFLSIKRRL*PMAKLLSQCISNYW Trigger: CCAATAATTTGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACTAAGAAAGTAAGGGAGATGTGTTCCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR CCA 90 bp | TTGAGCAGGTGGAGAATTTCTGTCACATTAACCTTTTTGAGGGAGTaGGCAATCTGTGATCGTTCTTTTCTAAATAATGCTTATTTAAAC | + |
Preference number: 1 (lower is better) Translates to: LSRWRISVTLTFLRE*AICDRSFLNNAYLN Trigger: GTTTAAATAAGCATTATTTAGAAAAGAACGATCACAGATTGCCCACTCCCTCAAAAAGGTTAATGTGACAGAAATTCTCCACCTGCTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR TCA 90 bp | AAAAATCATTCAAAAGTTCATCAGCCAGAAAGAAGTACTATCTGGTaGACTTCATTCATTCCAACCATCTCTCTTAATCATACAGGCACA | + |
Preference number: 1 (lower is better) Translates to: KNHSKVHQPERSTIW*TSFIPTISLNHTGT Trigger: TGTGCCTGTATGATTAAGAGAGATGGTTGGAATGAATGAAGTTCACCAGATAGTACTTCTTTCTGGCTGATGAACTTTTGAATGATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR GCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTTTGCCCAGGCTGAAGTaGAGTGGCACGATCTCAGCT | + |
Preference number: 2 (lower is better) Translates to: NELEVGLLILEPSHQTHSLPRLK*SGTISA Trigger: AGCTGAGATCGTGCCACTGCACTTCAGCCTGGGCAA...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR TCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTAGGCAAGCACATAGATaGCAGAAAGAGCCTTACAGC | + |
Preference number: 2 (lower is better) Translates to: NELEVGLLILEPSHQTHSRQAHR*QKEPYS Trigger: GCTGTAAGGCTCTTTCTGTCATCTATGTGCTTGCCT...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR GCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTAGGCATGCGCCACCATaGCCGGCTAATTTTGTATTT | + |
Preference number: 2 (lower is better) Translates to: NELEVGLLILEPSHQTHSRHAPP*PANFVF Trigger: AAATACAAAATTAGCCGGGCATGGTGGCGCATGCCT...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR GCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTTGCTGGGACTACAGTTaGAGAAGTCATTCCATCACT | + |
Preference number: 2 (lower is better) Translates to: NELEVGLLILEPSHQTHSCWDYS*RSHSIT Trigger: AGTGATGGAATGACTTCTGCAACTGTAGTCCCAGCA...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR CCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTGCTATTGATTGGCTGTaGTACCTCAATTTTGGTCCA | + |
Preference number: 2 (lower is better) Translates to: NELEVGLLILEPSHQTHSAIDWL*YLNFGP Trigger: TGGACCAAAATTGAGGTACCACAGCCAATCAATAGC...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR TCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTTACTCCTTTGATCTTTaGATAACAGCAGCAGCACAA | + |
Preference number: 2 (lower is better) Translates to: NELEVGLLILEPSHQTHSYSFDL*ITAAAQ Trigger: TTGTGCTGCTGCTGTTATTCAAAGATCAAAGGAGTA...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR GCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTATGCATTATTTCTTTTaGCCCTTGGAACACATCTCC | + |
Preference number: 2 (lower is better) Translates to: NELEVGLLILEPSHQTHSMHYFF*PLEHIS Trigger: GGAGATGTGTTCCAAGGGGCAAAAGAAATAATGCAT...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR CCA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCATACTGGATGACAGCTTaGTTGGTCCATGGGTCATTT | + |
Preference number: 2 (lower is better) Translates to: SIKRRLCPMAKLLSQCISYWMTA*LVHGSF Trigger: AAATGACCCATGGACCAACCAAGCTGTCATCCAGTA...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR CCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTTTTCCTGCTATTGATTaGCTGTGGTACCTCAATTTT | + |
Preference number: 2 (lower is better) Translates to: NELEVGLLILEPSHQTHSFPAID*LWYLNF Trigger: AAAATTGAGGTACCACAGCCAATCAATAGCAGGAAA...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR TCA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCATCTGGGAAGTCTTATTaGCAGATTCCACCATTACTT | + |
Preference number: 2 (lower is better) Translates to: SIKRRLCPMAKLLSQCISSGKSY*QIPPLL Trigger: AAGTAATGGTGGAATCTGTCAATAAGACTTCCCAGA...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR GCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTCACCAGAATTCACTTTaGATAGTAAGTATTCTTTCC | + |
Preference number: 2 (lower is better) Translates to: NELEVGLLILEPSHQTHSHQNSL*IVSILS Trigger: GGAAAGAATACTTACTATGCAAAGTGAATTCTGGTG...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR CCA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCAATTTTAAGAGTGTACTaGATGACAGCTTGGTTGGTC | + |
Preference number: 2 (lower is better) Translates to: SIKRRLCPMAKLLSQCISILRVY*MTAWLV Trigger: GACCAACCAAGCTGTCATCCAGTACACTCTTAAAAT...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR GCA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCACGATATCTACAGACATaGAACATGTCTTACTCTTAC | + |
Preference number: 2 (lower is better) Translates to: SIKRRLCPMAKLLSQCISRYLQT*NMSYSY Trigger: GTAAGAGTAAGACATGTTGCATGTCTGTAGATATCG...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR CCA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCAGTTACTAAAATTTATTaGGCTTTGTGCGTGGGTTTA | + |
Preference number: 2 (lower is better) Translates to: SIKRRLCPMAKLLSQCISVTKIY*ALCVGL Trigger: TAAACCCACGCACAAAGCCCAATAAATTTTAGTAAC...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR CAA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTGCCTTACAGCAAGGTTaGTCCTCAAGCTCCATCTCC | + |
Preference number: 3 (lower is better) Translates to: NELEVGLLILEPSHQTHSALQQG*SSSSIS Trigger: GGAGATGGAGCTTGAGGACAAACCTTGCTGTAAGGC...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR CAA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTTGGATGACAGCTTGGTaGGTCCATGGGTCATTTCTG | + |
Preference number: 3 (lower is better) Translates to: NELEVGLLILEPSHQTHSWMTAW*VHGSFL Trigger: CAGAAATGACCCATGGACCAACCAAGCTGTCATCCA...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR CAA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTGTACTGGATGACAGCTaGGTTGGTCCATGGGTCATT | + |
Preference number: 3 (lower is better) Translates to: NELEVGLLILEPSHQTHSVLDDS*VGPWVI Trigger: AATGACCCATGGACCAACCAAGCTGTCATCCAGTAC...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR GCA 72 bp | CACTTTTTCTCAAACCTTTGGAGCCTTTTGCTTCATTaGCTTCTTGTTATAAGATCTGAGACCATCCTGACC | + |
Preference number: 3 (lower is better) Translates to: HFFSNLWSLLLH*LLVIRSETILT Trigger: GGTCAGGATGGTCTCAGATCTTATAACAAGAAGGCAATGAAGCAAAAGGCTCCAAAGGTTTGAGAAAAAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR CAA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTAGTATTAAAAGGCGATaGTGCCCTATGGCAAAGCTT | + |
Preference number: 3 (lower is better) Translates to: NELEVGLLILEPSHQTHSSIKRR*CPMAKL Trigger: AAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR CAA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTTATTTCTTTTGCCCCTaGGAACACATCTCCCTTACT | + |
Preference number: 3 (lower is better) Translates to: NELEVGLLILEPSHQTHSYFFCP*EHISLT Trigger: AGTAAGGGAGATGTGTTCCAAGGGGCAAAAGAAATA...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR TCA 72 bp | AGTTTAAAATGCTTCATCCATAGGCAAGCACATAGATaGCAGAAAGAGCCTTACAGCAAGGTTTGTCCTCAA | + |
Preference number: 3 (lower is better) Translates to: SLKCFIHRQAHR*QKEPYSKVCPQ Trigger: TTGAGGACAAACCTTGCTGTAAGGCTCTTTCTGTCATCTATGTGCTTGCCTATGGATGAAGCATTTTAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR CCA 72 bp | AATAGGGACATTCTCTTTCCTGCTATTGATTGGCTGTaGTACCTCAATTTTGGTCCACATATTACCATATGT | + |
Preference number: 3 (lower is better) Translates to: NRDILFPAIDWL*YLNFGPHITIC Trigger: ACATATGGTAATATGTGGACCAAAATTGAGGTACCACAGCCAATCAATAGCAGGAAAGAGAATGTCCCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR CCA 72 bp | TGGAGAATTTCTGTCACATTAACCTTTTTGAGGGAGTaGGCAATCTGTGATCGTTCTTTTCTAAATAATGCT | + |
Preference number: 3 (lower is better) Translates to: WRISVTLTFLRE*AICDRSFLNNA Trigger: AGCATTATTTAGAAAAGAACGATCACAGATTGCCCACTCCCTCAAAAAGGTTAATGTGACAGAAATTCTCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR-3UTR CAA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCATGTGGTACCTCAATTTaGGTCCACATATTACCATAT | + |
Preference number: 3 (lower is better) Translates to: SIKRRLCPMAKLLSQCISCGTSI*VHILPY Trigger: ATATGGTAATATGTGGACCAAAATTGAGGTACCACA...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR TCA 72 bp | TCAAAAGTTCATCAGCCAGAAAGAAGTACTATCTGGTaGACTTCATTCATTCCAACCATCTCTCTTAATCAT | + |
Preference number: 3 (lower is better) Translates to: SKVHQPERSTIW*TSFIPTISLNH Trigger: ATGATTAAGAGAGATGGTTGGAATGAATGAAGTTCACCAGATAGTACTTCTTTCTGGCTGATGAACTTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR TCA 72 bp | CACCAGAATTCACTTTGCATAGTAAGTATTCTTTCCTaGAATTTGTCTCAGTACAGAATACAGATGTGTACA | + |
Preference number: 3 (lower is better) Translates to: HQNSLCIVSILS*NLSQYRIQMCT Trigger: TGTACACATCTGTATTCTGTACTGAGACAAATTTCAGGAAAGAATACTTACTATGCAAAGTGAATTCTGGTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTATCGACTCCGCCTTCTaGGAGACCGGCTCCTACTCC | + |
Preference number: 4 (lower is better) Translates to: NELEVGLLILEPSHQTHSIDSAF*ETGSYS Trigger: GGAGTAGGAGCCGGTCTCCCAGAAGGCGGAGTCGAT...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR GCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTGCTCACCGCATCCTCTaGCTCCCAGGTTCAAGCGAT | + |
Preference number: 4 (lower is better) Translates to: NELEVGLLILEPSHQTHSAHRIL*LPGSSD Trigger: ATCGCTTGAACCTGGGAGGCAGAGGATGCGGTGAGC...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR TCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTCCGGCGGTGATCAGGTaGTGGCACTCTTTCCAACTT | + |
Preference number: 4 (lower is better) Translates to: NELEVGLLILEPSHQTHSPAVIR*WHSFQL Trigger: AAGTTGGAAAGAGTGCCATCACCTGATCACCGCCGG...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR TCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTCTTAGGCGACCATCTTaGAGCCGGAAACACCGTAGT | + |
Preference number: 4 (lower is better) Translates to: NELEVGLLILEPSHQTHSLRRPS*SRKHRS Trigger: ACTACGGTGTTTCCGGCTTCAAGATGGTCGCCTAAG...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTTACTGGATGACAGCTTaGTTGGTCCATGGGTCATTT | + |
Preference number: 4 (lower is better) Translates to: NELEVGLLILEPSHQTHSYWMTA*LVHGSF Trigger: AAATGACCCATGGACCAACCAAGCTGTCATCCAGTA...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTACCTTTTTGAGGGAGTaGGCAATCTGTGATCGTTCT | + |
Preference number: 4 (lower is better) Translates to: NELEVGLLILEPSHQTHSTFLRE*AICDRS Trigger: AGAACGATCACAGATTGCCCACTCCCTCAAAAAGGT...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR TCA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCAAGGCAAGCACATAGATaGCAGAAAGAGCCTTACAGC | + |
Preference number: 4 (lower is better) Translates to: SIKRRLCPMAKLLSQCISRQAHR*QKEPYS Trigger: GCTGTAAGGCTCTTTCTGTCATCTATGTGCTTGCCT...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR TCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTTCTTGTTATAAGATCTaGGACCATCCTGACCCCATT | + |
Preference number: 4 (lower is better) Translates to: NELEVGLLILEPSHQTHSSCYKI*DHPDPI Trigger: AATGGGGTCAGGATGGTCTCAGATCTTATAACAAGA...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR TCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTTCTGGGAAGTCTTATTaGCAGATTCCACCATTACTT | + |
Preference number: 4 (lower is better) Translates to: NELEVGLLILEPSHQTHSSGKSY*QIPPLL Trigger: AAGTAATGGTGGAATCTGTCAATAAGACTTCCCAGA...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR GCA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCATGCTGGGACTACAGTTaGAGAAGTCATTCCATCACT | + |
Preference number: 4 (lower is better) Translates to: SIKRRLCPMAKLLSQCISCWDYS*RSHSIT Trigger: AGTGATGGAATGACTTCTGCAACTGTAGTCCCAGCA...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTATTTTAAGAGTGTACTaGATGACAGCTTGGTTGGTC | + |
Preference number: 4 (lower is better) Translates to: NELEVGLLILEPSHQTHSILRVY*MTAWLV Trigger: GACCAACCAAGCTGTCATCCAGTACACTCTTAAAAT...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTATTTCTTTTGCCCCTTaGAACACATCTCCCTTACTT | + |
Preference number: 4 (lower is better) Translates to: NELEVGLLILEPSHQTHSISFAP*NTSPLL Trigger: AAGTAAGGGAGATGTGTTCCAAGGGGCAAAAGAAAT...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR CAA 72 bp | AATTCCTGGCACTTTTTCTCAAACCTTTGGAGCCTTTaGCTTCATTGCCTTCTTGTTATAAGATCTGAGACC | + |
Preference number: 4 (lower is better) Translates to: NSWHFFSNLWSL*LHCLLVIRSET Trigger: GGTCTCAGATCTTATAACAAGAAGGCAATGAAGCAAAAGGCTCCAAAGGTTTGAGAAAAAGTGCCAGGAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR GCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTATTAAAAGGCGATTGTaGCCTATGGCAAAGCTTTTA | + |
Preference number: 4 (lower is better) Translates to: NELEVGLLILEPSHQTHSIKRRL*PMAKLL Trigger: TAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAAT...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR TCA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCATACTCCTTTGATCTTTaGATAACAGCAGCAGCACAA | + |
Preference number: 4 (lower is better) Translates to: SIKRRLCPMAKLLSQCISYSFDL*ITAAAQ Trigger: TTGTGCTGCTGCTGTTATTCAAAGATCAAAGGAGTA...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR TCA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCAGATCTGAGACCATCCTaGCCCCATTTAATTCTTTTT | + |
Preference number: 4 (lower is better) Translates to: SIKRRLCPMAKLLSQCISDLRPS*PHLILF Trigger: AAAAAGAATTAAATGGGGTCAGGATGGTCTCAGATC...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR TCA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCAAGAAGTACTATCTGGTaGACTTCATTCATTCCAACC | + |
Preference number: 4 (lower is better) Translates to: SIKRRLCPMAKLLSQCISRSTIW*TSFIPT Trigger: GGTTGGAATGAATGAAGTTCACCAGATAGTACTTCT...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR GCA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCAATGCATTATTTCTTTTaGCCCTTGGAACACATCTCC | + |
Preference number: 4 (lower is better) Translates to: SIKRRLCPMAKLLSQCISMHYFF*PLEHIS Trigger: GGAGATGTGTTCCAAGGGGCAAAAGAAATAATGCAT...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR GCA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTAGCCTTTTGCTTCATTaGCTTCTTGTTATAAGATCT | + |
Preference number: 4 (lower is better) Translates to: NELEVGLLILEPSHQTHSSLLLH*LLVIRS Trigger: AGATCTTATAACAAGAAGGCAATGAAGCAAAAGGCT...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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3UTR CAA 72 bp | ACACATCTCCCTTACTTTCTTAGTATTAAAAGGCGATaGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATT | + |
Preference number: 4 (lower is better) Translates to: THLPYFLSIKRR*CPMAKLLSQCI Trigger: AATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACTAAGAAAGTAAGGGAGATGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CCA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCATTTTTCTCAAACCTTTaGAGCCTTTTGCTTCATTGC | + |
Preference number: 4 (lower is better) Translates to: SIKRRLCPMAKLLSQCISFFSNL*SLLLHC Trigger: GCAATGAAGCAAAAGGCTCCAAAGGTTTGAGAAAAA...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CAA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTGAGGGGCTTCTCCTTTaGGGAGATCGACTCCGCCTT | + |
Preference number: 5 (lower is better) Translates to: NELEVGLLILEPSHQTHSEGLLL*GDRLRL Trigger: AAGGCGGAGTCGATCTCCCAAAAGGAGAAGCCCCTC...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CAA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCAGCCTTACAGCAAGGTTaGTCCTCAAGCTCCATCTCC | + |
Preference number: 5 (lower is better) Translates to: SIKRRLCPMAKLLSQCISALQQG*SSSSIS Trigger: GGAGATGGAGCTTGAGGACAAACCTTGCTGTAAGGC...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CAA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCAGTACTGGATGACAGCTaGGTTGGTCCATGGGTCATT | + |
Preference number: 5 (lower is better) Translates to: SIKRRLCPMAKLLSQCISVLDDS*VGPWVI Trigger: AATGACCCATGGACCAACCAAGCTGTCATCCAGTAC...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CAA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTAATGCATTATTTCTTTaGCCCCTTGGAACACATCTC | + |
Preference number: 5 (lower is better) Translates to: NELEVGLLILEPSHQTHSNALFL*PLGTHL Trigger: GAGATGTGTTCCAAGGGGCAAAAGAAATAATGCATT...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CAA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCAGTCACATTAACCTTTTaGAGGGAGTGGGCAATCTGT | + |
Preference number: 5 (lower is better) Translates to: SIKRRLCPMAKLLSQCISVTLTF*REWAIC Trigger: ACAGATTGCCCACTCCCTCAAAAAGGTTAATGTGAC...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CAA 90 bp | AATGAGCTTGAAGTTGGGTTGTTAATATTGGAACCCTCTCACCAAACCCATTCTGAGCCTTTTGCTTCATaGCCTTCTTGTTATAAGATC | + |
Preference number: 5 (lower is better) Translates to: NELEVGLLILEPSHQTHSEPFAS*PSCYKI Trigger: GATCTTATAACAAGAAGGCAATGAAGCAAAAGGCTC...AGAATGGGTTTGGTGAGAGGGTTCCAATATTAACAACCCAACTTCAAGCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CAA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCAAGTATTAAAAGGCGATaGTGCCCTATGGCAAAGCTT | + |
Preference number: 5 (lower is better) Translates to: SIKRRLCPMAKLLSQCISSIKRR*CPMAKL Trigger: AAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CAA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCAGAGCTTGAAGTTGGGTaGTTAATATTGGAACCCTCT | + |
Preference number: 5 (lower is better) Translates to: SIKRRLCPMAKLLSQCISELEVG*LILEPS Trigger: AGAGGGTTCCAATATTAACAACCCAACTTCAAGCTC...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CAA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCAAACCTTTGGAGCCTTTaGCTTCATTGCCTTCTTGTT | + |
Preference number: 5 (lower is better) Translates to: SIKRRLCPMAKLLSQCISNLWSL*LHCLLV Trigger: AACAAGAAGGCAATGAAGCAAAAGGCTCCAAAGGTT...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |
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CDS-3UTR CAA 90 bp | AGTATTAAAAGGCGATTGTGCCCTATGGCAAAGCTTTTAAGTCAGTGTATTTCAACCAGCACACTCTACTaGTTATTTCTATATAGACAG | + |
Preference number: 5 (lower is better) Translates to: SIKRRLCPMAKLLSQCISTSTLY*LFLYRQ Trigger: CTGTCTATATAGAAATAACAAGTAGAGTGTGCTGGT...TGAAATACACTGACTTAAAAGCTTTGCCATAGGGCACAATCGCCTTTTAATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000257181.10 |