RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PROZ (Homo sapiens)

Ensembl gene IDs: ENSG00000126231

Ensembl transcript IDs: ENST00000342783.5, ENST00000375547.7, ENST00000493630.1

Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTaGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCC +
Preference number: 1 (lower is better)
Translates to: PANGGSAAAWAKRVV*GCDGLSVCDEVSAP
Trigger: GGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
3UTR CCA 90 bp CAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGTaGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGT +
Preference number: 1 (lower is better)
Translates to: QCSVNNPANGGSAAA*AKRVVWGCDGLSVC
Trigger: ACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
3UTR CCA 90 bp ACAACCCAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTaGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAG +
Preference number: 1 (lower is better)
Translates to: TTQQTAALLLRGPSG*SGAVTASQCVMKFQ
Trigger: CTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
3UTR GCA 90 bp GCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTaGCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCATTCTGGCT +
Preference number: 1 (lower is better)
Translates to: ASQCVMKFQRPPQWQ*QLGIPLPVVLFILA
Trigger: AGCCAGAATGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
3UTR CCA 90 bp GTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTaGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCATT +
Preference number: 1 (lower is better)
Translates to: VTASQCVMKFQRPPQ*QCQLGIPLPVVLFI
Trigger: AATGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
3UTR-3UTR GCA 90 bp TGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTCCTCCACAGTGGCAGTaGCAGCTTGGAATCCCGCTT +
Preference number: 2 (lower is better)
Translates to: WAKRVVWGCDGLSVCDEVPPQWQ*QLGIPL
Trigger: AAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGG...AACTTCATCACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
3UTR-3UTR CCA 90 bp GAAAGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCGTGGCAGTGCCAGCTTaGAATCCCGCTTCCGGTTGT +
Preference number: 2 (lower is better)
Translates to: ERKVTVLGKQPSKRRLCCVAVPA*NPASGC
Trigger: ACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCAC...GCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
3UTR CCA 72 bp CAAACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTaGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGATG +
Preference number: 3 (lower is better)
Translates to: QTAALLLRGPSG*SGAVTASQCVM
Trigger: CATCACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
3UTR CCA 72 bp GTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGTaGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTC +
Preference number: 3 (lower is better)
Translates to: VNNPANGGSAAA*AKRVVWGCDGL
Trigger: GAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
3UTR-3UTR CAA 90 bp CTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGAGTGGCAGTGCCAGCTaGGAATCCCGCTTCCGGTTG +
Preference number: 3 (lower is better)
Translates to: LLRGPSGWSGAVTASQCVSGSAS*ESRFRL
Trigger: CAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACT...CACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
3UTR GCA 72 bp ACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTaGTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTG +
Preference number: 3 (lower is better)
Translates to: TVLGKQPSKRRL*CCVGQAGGLGL
Trigger: CAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
3UTR CCA 72 bp GGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTaGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTT +
Preference number: 3 (lower is better)
Translates to: GGSAAAWAKRVV*GCDGLSVCDEV
Trigger: AACTTCATCACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
3UTR-3UTR CAA 90 bp CGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCGAATCCCGCTTCCGGTaGTGTTGTTCATTCTGGCTA +
Preference number: 3 (lower is better)
Translates to: RVVWGCDGLSVCDEVSAPESRFR*CCSFWL
Trigger: TAGCCAGAATGAACAACACAACCGGAAGCGGGATTC...GGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCCAGACCACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
3UTR CCA 72 bp GAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTaGAATCCCGCTTCCGGTTGTGTTGTTCATTCTGGC +
Preference number: 3 (lower is better)
Translates to: EVSAPSTVAVPA*NPASGCVVHSG
Trigger: GCCAGAATGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
3UTR CCA 72 bp TCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTaGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTG +
Preference number: 3 (lower is better)
Translates to: SQCVMKFQRPPQ*QCQLGIPLPVV
Trigger: CACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp ACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCGTCAGTGCCATTGCGTaGCCAGCCGCTGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: TAALLLRGPSGWSGAVTAVSAIA*PAAEEA
Trigger: GGCCTCCTCAGCGGCTGGGCACGCAATGGCACTGAC...GGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp CAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGTGCCCTCCTACTGGCTaGGAGCCCAGGACCCCCGTG +
Preference number: 4 (lower is better)
Translates to: QQTAALLLRGPSGWSGAVCPPTG*EPRTPV
Trigger: CACGGGGGTCCTGGGCTCGCAGCCAGTAGGAGGGCA...CACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp GGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCCACCTGGGCACTGGATaGGCCACTCCAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GGSAAAWAKRVVWGCDGLHLGTG*ATPAPA
Trigger: TGCTGGAGCTGGAGTGGCCCATCCAGTGCCCAGGTG...GAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp CAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGAGCCTGCCCTCCTACTaGCTGCGAGCCCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: QQTAALLLRGPSGWSGAVSLPSY*LRAQDP
Trigger: GGGGTCCTGGGCTCGCAGCCAGTAGGAGGGCAGGCT...CACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp CAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACCAGGACCAGGCCCTaGAGCAGTGGGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QQTAALLLRGPSGWSGAVTRTRP*SSGTQP
Trigger: AGGCTGCGTCCCACTGCTCCAGGGCCTGGTCCTGGT...CACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp GGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCCCCCAGATGCTGTCCTaGCAAGAGCCGTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GGSAAAWAKRVVWGCDGLPQMLS*QEPLWR
Trigger: CCTCCACAACGGCTCTTGCCAGGACAGCATCTGGGG...GAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp CAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGCTCCAGCTCCAGCAGTaGCAGGTCATTCTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: QQTAALLLRGPSGWSGAVLQLQQ*QVILPR
Trigger: GCGGGGGAGAATGACCTGTCACTGCTGGAGCTGGAG...CACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp ACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCAGGTGTAGCCCCAGATaGTGTCCTGGCAAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: TAALLLRGPSGWSGAVTARCSPR*CPGKSR
Trigger: ACGGCTCTTGCCAGGACAGCATCTGGGGCTACACCT...GGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp CTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGAGGCCCCTGGTGCGTaGGATGAGGAGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLLRGPSGWSGAVTASQCEAPGA*DEEVLS
Trigger: GCTGAGCACCTCCTCATCCCACGCACCAGGGGCCTC...ACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp CTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGGCCAAGCGGGTGGTCTaGGGCTGTGACGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LLRGPSGWSGAVTASQCVAKRVV*GCDGLS
Trigger: TGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGC...CACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp CAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGTGGCAAGAGCCGTTGTaGAGGCAGGGCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: QQTAALLLRGPSGWSGAVWQEPL*RQGWEM
Trigger: CATCTCCCAGCCCTGCCTCCACAACGGCTCTTGCCA...CACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp CTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGCATGGCCGCCACGCTaGTTCTCTCACAGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: LLLRGPSGWSGAVTASQCAWPPR*FSHSRS
Trigger: GGACCTACTGTGAGAGAAGCAGCGTGGCGGCCATGC...ACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp CTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGTGGCAAGAGCCGTTGTaGAGGCAGGGCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LLRGPSGWSGAVTASQCVWQEPL*RQGWEM
Trigger: CATCTCCCAGCCCTGCCTCCACAACGGCTCTTGCCA...CACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp GGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGGGGGAGCCCCGCACCTaGGCACTGGATGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: GAVTASQCVMKFQRPPQWGEPRT*ALDGPL
Trigger: GAGTGGCCCATCCAGTGCCCAGGTGCGGGGCTCCCC...CCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp CCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCATTGCGTGCCCAGCCGCTaGGGAGGCCCCTGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: PSTVAVPAWNPASGCVVHCVPSR*GGPWCV
Trigger: CACGCACCAGGGGCCTCCTCAGCGGCTGGGCACGCA...ATGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp CGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCGGCAGGGCTGGGAGATaGACGGGGAGCCGCCCTTAT +
Preference number: 4 (lower is better)
Translates to: RVVWGCDGLSVCDEVSAPGRAGR*TGSRPY
Trigger: ATAAGGGCGGCTCCCCGTGCATCTCCCAGCCCTGCC...GGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCCAGACCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp CTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGCTTCCATCCATCCAGTaGATGGCCGCCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LLRGPSGWSGAVTASQCVLPSIQ*MAATLL
Trigger: AAGCAGCGTGGCGGCCATGCACTGGATGGATGGAAG...CACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp TGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTGCCCTCCTACTGGCTaGGAGCCCAGGACCCCCGTG +
Preference number: 4 (lower is better)
Translates to: WAKRVVWGCDGLSVCDEVCPPTG*EPRTPV
Trigger: CACGGGGGTCCTGGGCTCGCAGCCAGTAGGAGGGCA...AACTTCATCACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTCGGCGGCTCTGCTGCTaGGTGGGCCAAGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GLSVCDEVSAPSTVAVPARRLCC*VGQAGG
Trigger: ACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCG...AGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp CGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCAAACGGCGGCTCTGCTaGTGCGTGGGCCAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: RVVWGCDGLSVCDEVSAPKRRLC*CVGQAG
Trigger: ACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTT...GGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCCAGACCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp TGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTCCCGCACCTGGGCACTaGATGGGCCACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WAKRVVWGCDGLSVCDEVPAPGH*MGHSSS
Trigger: GGAGCTGGAGTGGCCCATCCAGTGCCCAGGTGCGGG...AACTTCATCACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp TGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGGGGAGCCCCGCACCTaGGCACTGGATGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: WGCDGLSVCDEVSAPSTVGEPRT*ALDGPL
Trigger: GAGTGGCCCATCCAGTGCCCAGGTGCGGGGCTCCCC...CACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp TTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTGGCTCTGCTGCTGCGTaGGCCAAGCGGGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FSALHSGSASLESRFRLCGSAAA*AKRVVW
Trigger: CCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCC...ACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp GCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGCCCCCTCCACAAGTGTaGCAGGCCGCGTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: AVTASQCVMKFQRPPQWQPPPQV*QAAWSA
Trigger: CGCTGACCACGCGGCCTGTCACACTTGTGGAGGGGG...CTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp CTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGCGGCGGCTCTGCTGCTaGGTGGGCCAAGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LSVCDEVSAPSTVAVPAWRRLCC*VGQAGG
Trigger: ACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCG...CCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp TGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTAAACGGCGGCTCTGCTaGTGCGTGGGCCAAGCGGGT +
Preference number: 4 (lower is better)
Translates to: WAKRVVWGCDGLSVCDEVKRRLC*CVGQAG
Trigger: ACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTT...AACTTCATCACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp GCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTCGTGGGCCAAGCGGGTaGTCTGGGGCTGTGACGGCC +
Preference number: 4 (lower is better)
Translates to: ASQCVMKFQRPPQWQCQLRGPSG*SGAVTA
Trigger: GGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACG...AAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp GACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGGCTCTGCTGCTGCGTaGGCCAAGCGGGTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: DGLSVCDEVSAPSTVAVPGSAAA*AKRVVW
Trigger: CCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCC...TGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp CAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGTCAGTCCGCTCTGGGTaGCATTCATTTTTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QQTAALLLRGPSGWSGAVSVRSG*HSFLAS
Trigger: GCTGGCTAAAAATGAATGTCACCCAGAGCGGACTGA...CACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp CTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTCTCTGTGTTCTCTGGTaGCCACACTTCCATCCATCC +
Preference number: 4 (lower is better)
Translates to: LLLRGPSGWSGAVTASQCLCVLW*PHFHPS
Trigger: GGATGGATGGAAGTGTGGTCACCAGAGAACACAGAG...ACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAAGCCGGGGGAGCAGGTaGAGGTGTAGCCCCAGATGC +
Preference number: 4 (lower is better)
Translates to: DGLSVCDEVSAPSTVAVPSRGSR*RCSPRC
Trigger: GCATCTGGGGCTACACCTGCACCTGCTCCCCCGGCT...TGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp ACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTTTGTTAACTTTACCTaGCACGGGAGGTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: TAALLLRGPSGWSGAVTAFVNFT*HGRSCR
Trigger: TCTACAGGACCTCCCGTGGCAGGTAAAGTTAACAAA...GGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp TCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCGCGTGGTCAGCGAGTTaGCCAGGTCAGTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: SQCSVNNPANGGSAAAWAAWSAS*PGQCHC
Trigger: GCAATGGCACTGACCTGGGCAACTCGCTGACCACGC...GGCCCACGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp ACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGAGCAAACGGCGGCTCTaGTGCTGCGTGGGCCAAGCG +
Preference number: 4 (lower is better)
Translates to: TASQCVMKFQRPPQWQCQSKRRL*CCVGQA
Trigger: CGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCT...CTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp GGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTCAGGCCCTGGAGCAGTaGGACGCAGCCTGCCATTCC +
Preference number: 4 (lower is better)
Translates to: GLSVCDEVSAPSTVAVPAQALEQ*DAACHS
Trigger: GGAATGGCAGGCTGCGTCCCACTGCTCCAGGGCCTG...AGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp ACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGGAGGGCTCCACACGATaGAGGGCGAGGACCAGGACC +
Preference number: 4 (lower is better)
Translates to: TASQCVMKFQRPPQWQCQEGSTR*RARTRT
Trigger: GGTCCTGGTCCTCGCCCTCCATCGTGTGGAGCCCTC...CTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp GCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTAGCCTGCCCTCCTACTaGCTGCGAGCCCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: ASQCVMKFQRPPQWQCQLSLPSY*LRAQDP
Trigger: GGGGTCCTGGGCTCGCAGCCAGTAGGAGGGCAGGCT...AAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp AGAGTTCCAGGGAAAGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCTGCGTGCCCAGCCGCTaGGGAGGCCCCTGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: RVPGKERSQCSVNNPANGCVPSR*GGPWCV
Trigger: CACGCACCAGGGGCCTCCTCAGCGGCTGGGCACGCA...GCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTTCCCTGGAACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp TGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGAGCCCAGGACCCCCGTaGGAAACCAGGAGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: WGCDGLSVCDEVSAPSTVSPGPP*ETRSLC
Trigger: ACAGAGGCTCCTGGTTTCTCACGGGGGTCCTGGGCT...CACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp GAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGAGCCCAGGACCCCCGTaGGAAACCAGGAGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ERSQCSVNNPANGGSAAASPGPP*ETRSLC
Trigger: ACAGAGGCTCCTGGTTTCTCACGGGGGTCCTGGGCT...CGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp GGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGGTGACAAGGACCATGTaGGCCTGCCCTCCTACTGGC +
Preference number: 4 (lower is better)
Translates to: GAVTASQCVMKFQRPPQWVTRTM*ACPPTG
Trigger: GCCAGTAGGAGGGCAGGCTCACATGGTCCTTGTCAC...CCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTAGCCGGGGGAGCAGGTaGAGGTGTAGCCCCAGATGC +
Preference number: 4 (lower is better)
Translates to: ASQCVMKFQRPPQWQCQLSRGSR*RCSPRC
Trigger: GCATCTGGGGCTACACCTGCACCTGCTCCCCCGGCT...AAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp TCTGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGAGTTGCCCAGGTCAGTaGCATTGCGTGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SGAVTASQCVMKFQRPPQSCPGQ*HCVPSR
Trigger: GCGGCTGGGCACGCAATGGCACTGACCTGGGCAACT...CTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp TCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCCTTCCATCCATCCAGTaGATGGCCGCCACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SQCSVNNPANGGSAAAWALPSIQ*MAATLL
Trigger: AAGCAGCGTGGCGGCCATGCACTGGATGGATGGAAG...GGCCCACGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp TCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCCCTCCACAGTGGCAGTaGCAGCTTGGAATCCCGCTT +
Preference number: 4 (lower is better)
Translates to: SQCSVNNPANGGSAAAWAPPQWQ*QLGIPL
Trigger: AAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGG...GGCCCACGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTAGCAAACGGCGGCTCTaGTGCTGCGTGGGCCAAGCG +
Preference number: 4 (lower is better)
Translates to: ASQCVMKFQRPPQWQCQLSKRRL*CCVGQA
Trigger: CGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCT...AAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp CTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGACCAGGACCAGGCCCTaGAGCAGTGGGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LSVCDEVSAPSTVAVPAWTRTRP*SSGTQP
Trigger: AGGCTGCGTCCCACTGCTCCAGGGCCTGGTCCTGGT...CCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp TCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCCAGGCACACTGGTCGTaGGGCACACACTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: SQCSVNNPANGGSAAAWAQAHWS*GTHCLW
Trigger: CCACAAACAGTGTGTGCCCCACGACCAGTGTGCCTG...GGCCCACGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp CAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCCGCACCTGGGCACTaGATGGGCCACTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QCVMKFQRPPQWQCQLGIPAPGH*MGHSSS
Trigger: GGAGCTGGAGTGGCCCATCCAGTGCCCAGGTGCGGG...GATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp TTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTCAGCGCCCTCCACAGTaGCAGTGCCAGCTTGGAATC +
Preference number: 4 (lower is better)
Translates to: FSALHSGSASLESRFRLCQRPPQ*QCQLGI
Trigger: GATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTG...ACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp TGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGGCCAAGCGGGTGGTCTaGGGCTGTGACGGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: CVMKFQRPPQWQCQLGIPAKRVV*GCDGLS
Trigger: TGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGC...CGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp GCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTCTCCAGCTCCAGCAGTaGCAGGTCATTCTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: ASQCVMKFQRPPQWQCQLLQLQQ*QVILPR
Trigger: GCGGGGGAGAATGACCTGTCACTGCTGGAGCTGGAG...AAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp CAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCATTCTGGCTCCAGCTCGCAGTTGCTaGCCTCATAGCCGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QWQCQLGIPLPVVLFILAPARSC*PHSRGS
Trigger: GCTCCCCCGGCTATGAGGGCAGCAACTGCGAGCTGG...AGCCAGAATGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GAAAGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCCCAGCTCGCAGTTGCTaGCCTCATAGCCGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: ERKVTVLGKQPSKRRLCCPARSC*PHSRGS
Trigger: GCTCCCCCGGCTATGAGGGCAGCAACTGCGAGCTGG...GCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp CAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCATTCTGGCTGTCAGTGCCATTGCGTaGCCAGCCGCTGAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QWQCQLGIPLPVVLFILAVSAIA*PAAEEA
Trigger: GGCCTCCTCAGCGGCTGGGCACGCAATGGCACTGAC...AGCCAGAATGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp ATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGCATGGCCGCCACGCTaGTTCTCTCACAGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: MKFQRPPQWQCQLGIPLPAWPPR*FSHSRS
Trigger: GGACCTACTGTGAGAGAAGCAGCGTGGCGGCCATGC...CGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp GAAAGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCCAGGCCCTGGAGCAGTaGGACGCAGCCTGCCATTCC +
Preference number: 4 (lower is better)
Translates to: ERKVTVLGKQPSKRRLCCQALEQ*DAACHS
Trigger: GGAATGGCAGGCTGCGTCCCACTGCTCCAGGGCCTG...GCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp GAAAGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCGAGGCCCCTGGTGCGTaGGATGAGGAGGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ERKVTVLGKQPSKRRLCCEAPGA*DEEVLS
Trigger: GCTGAGCACCTCCTCATCCCACGCACCAGGGGCCTC...GCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp TGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTGTGGCAGTGCCAGCTTaGAATCCCGCTTCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: WAKRVVWGCDGLSVCDEVVAVPA*NPASGC
Trigger: ACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCAC...AACTTCATCACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp GACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCACAGCGCCCTCCACAGTaGCAGTGCCAGCTTGGAATC +
Preference number: 4 (lower is better)
Translates to: DGLSVCDEVSAPSTVAVPQRPPQ*QCQLGI
Trigger: GATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTG...TGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp GCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCAGGGAGGCAGAAGTGTTaGCACCCATCAGTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: ALHSGSASLESRFRLCCSGRQKC*HPSVRS
Trigger: AGAGCGGACTGATGGGTGTCAACACTTCTGCCTCCC...TGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp CGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCCTCTGTGTTCTCTGGTaGCCACACTTCCATCCATCC +
Preference number: 4 (lower is better)
Translates to: RVVWGCDGLSVCDEVSAPLCVLW*PHFHPS
Trigger: GGATGGATGGAAGTGTGGTCACCAGAGAACACAGAG...GGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCCAGACCACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGAGGTGTAGCCCCAGATaGTGTCCTGGCAAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: ERSQCSVNNPANGGSAAARCSPR*CPGKSR
Trigger: ACGGCTCTTGCCAGGACAGCATCTGGGGCTACACCT...CGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GAAAGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCAGTTGCCCAGGTCAGTaGCATTGCGTGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ERKVTVLGKQPSKRRLCCSCPGQ*HCVPSR
Trigger: GCGGCTGGGCACGCAATGGCACTGACCTGGGCAACT...GCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp AGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGCGTGGTCAGCGAGTTaGCCAGGTCAGTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: RKVTVLGKQPSKRRLCCCAWSAS*PGQCHC
Trigger: GCAATGGCACTGACCTGGGCAACTCGCTGACCACGC...GCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGCCTCCACAGTGGCAGTaGCAGCTTGGAATCCCGCTT +
Preference number: 4 (lower is better)
Translates to: ERSQCSVNNPANGGSAAAPPQWQ*QLGIPL
Trigger: AAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGG...CGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp CTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTGTGAAAGAAAGGTCACAGTaGTCGGTAAACAACCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLRGPSGWSGAVTASQCVKERSQ*SVNNPA
Trigger: TGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTT...CACACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp GCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGCATCCATCCAGTGCATaGCCGCCACGCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AVTASQCVMKFQRPPQWQHPSSA*PPRCFS
Trigger: AGAGAAGCAGCGTGGCGGCCATGCACTGGATGGATG...CTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp TCTGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGCATCCATCCAGTGCATaGCCGCCACGCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SGAVTASQCVMKFQRPPQHPSSA*PPRCFS
Trigger: AGAGAAGCAGCGTGGCGGCCATGCACTGGATGGATG...CTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp GCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGGTGGCAGTGCCAGCTTaGAATCCCGCTTCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: AVTASQCVMKFQRPPQWQVAVPA*NPASGC
Trigger: ACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCAC...CTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp TGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGACCTGGAGACCTTGGTaGCAAGGACCATGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: WGCDGLSVCDEVSAPSTVTWRPW*QGPCEP
Trigger: AGGCTCACATGGTCCTTGTCACCAAGGTCTCCAGGT...CACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp TCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCCAGGCAGAGTCAGAATaGAGTCCATGTCGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SQCSVNNPANGGSAAAWAQAESE*SPCRSF
Trigger: GAAGGAACGACATGGACTCCATTCTGACTCTGCCTG...GGCCCACGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342783.5
CDS-3UTR TCA 90 bp GCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTACCTGGAGACCTTGGTaGCAAGGACCATGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: ASQCVMKFQRPPQWQCQLTWRPW*QGPCEP
Trigger: AGGCTCACATGGTCCTTGTCACCAAGGTCTCCAGGT...AAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCACACCAGAACGTCGTTTaGTTTGGAGGCCGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: DGLSVCDEVSAPSTVAVPHQNVV*FGGREK
Trigger: TTTCTCCCGGCCTCCAAAGCAAACGACGTTCTGGTG...TGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTAGCCCTGAGCACAGCTaGATGTGTAGGATTCCTGTC +
Preference number: 4 (lower is better)
Translates to: GLSVCDEVSAPSTVAVPASPEHS*MCRIPV
Trigger: GACAGGAATCCTACACATGCAGCTGTGCTCAGGGCT...AGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGGCGTCATACCGCATGTaGACATGGACGTGCGTTATC +
Preference number: 4 (lower is better)
Translates to: AVTASQCVMKFQRPPQWQASYRM*TWTCVI
Trigger: GATAACGCACGTCCATGTGCACATGCGGTATGACGC...CTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGCGTGGGATGAGGAGGTaGTCAGCGAAGTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: ERSQCSVNNPANGGSAAARGMRR*SAKSFS
Trigger: TGAGAAAGACTTCGCTGAGCACCTCCTCATCCCACG...CGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp TGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGCGTGGGATGAGGAGGTaGTCAGCGAAGTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: WGCDGLSVCDEVSAPSTVRGMRR*SAKSFS
Trigger: TGAGAAAGACTTCGCTGAGCACCTCCTCATCCCACG...CACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp CAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCAGGCACACTGGTCGTaGGGCACACACTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: QCVMKFQRPPQWQCQLGIQAHWS*GTHCLW
Trigger: CCACAAACAGTGTGTGCCCCACGACCAGTGTGCCTG...GATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp AGAGTTCCAGGGAAAGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCCACCTGGGCACTGGATaGGCCACTCCAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RVPGKERSQCSVNNPANGHLGTG*ATPAPA
Trigger: TGCTGGAGCTGGAGTGGCCCATCCAGTGCCCAGGTG...GCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTTCCCTGGAACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp GAAAGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCGGACGTGCGTTATCTTaGTCATCAGCGGGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: ERKVTVLGKQPSKRRLCCGRALS*SSAGLG
Trigger: GCCAAGACCCGCTGATGATCAAGATAACGCACGTCC...GCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp CTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAGTAGGTCCTGGTGGTaGCAGTCACATTCAGGACCT +
Preference number: 4 (lower is better)
Translates to: LSVCDEVSAPSTVAVPAWSRSWW*QSHSGP
Trigger: AGGTCCTGAATGTGACTGTCACCACCAGGACCTACT...CCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp AGAGTTCCAGGGAAAGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGTGACAAGGACCATGTaGGCCTGCCCTCCTACTGGC +
Preference number: 4 (lower is better)
Translates to: RVPGKERSQCSVNNPANGVTRTM*ACPPTG
Trigger: GCCAGTAGGAGGGCAGGCTCACATGGTCCTTGTCAC...GCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTTCCCTGGAACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp TTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTCTGTTTAAACCAGAGTaGGTACCTGGAGACCTTGGT +
Preference number: 4 (lower is better)
Translates to: FSALHSGSASLESRFRLCLFKPE*VPGDLG
Trigger: ACCAAGGTCTCCAGGTACTCACTCTGGTTTAAACAG...ACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp AGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCCACCAGAACGTCGTTTaGTTTGGAGGCCGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: RKVTVLGKQPSKRRLCCCHQNVV*FGGREK
Trigger: TTTCTCCCGGCCTCCAAAGCAAACGACGTTCTGGTG...GCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp ATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTAGGATTCCTGTCCTaGGAGGCAGAAGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: MKFQRPPQWQCQLGIPLPVGFLS*EAEVLT
Trigger: TGTCAACACTTCTGCCTCCCAGGACAGGAATCCTAC...CGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp GCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGGAACGTCGTTTGCTTTaGAGGCCGGGAGAAATACTG +
Preference number: 4 (lower is better)
Translates to: AVTASQCVMKFQRPPQWQERRLL*RPGEIL
Trigger: CAGTATTTCTCCCGGCCTCCAAAGCAAACGACGTTC...CTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375547.7
CDS-3UTR TCA 90 bp TGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGTCAGTCCGCTCTGGGTaGCATTCATTTTTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: CVMKFQRPPQWQCQLGIPSVRSG*HSFLAS
Trigger: GCTGGCTAAAAATGAATGTCACCCAGAGCGGACTGA...CGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp AGAGTTCCAGGGAAAGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGGAGGCAGAAGTGTTaGCACCCATCAGTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: RVPGKERSQCSVNNPANGGRQKC*HPSVRS
Trigger: AGAGCGGACTGATGGGTGTCAACACTTCTGCCTCCC...GCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTTCCCTGGAACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR TCA 90 bp CAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCATTCTGGCTAGTAGGTCCTGGTGGTaGCAGTCACATTCAGGACCT +
Preference number: 4 (lower is better)
Translates to: QWQCQLGIPLPVVLFILASRSWW*QSHSGP
Trigger: AGGTCCTGAATGTGACTGTCACCACCAGGACCTACT...AGCCAGAATGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp CAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCATTCTGGCTAGCCCTGAGCACAGCTaGATGTGTAGGATTCCTGTC +
Preference number: 4 (lower is better)
Translates to: QWQCQLGIPLPVVLFILASPEHS*MCRIPV
Trigger: GACAGGAATCCTACACATGCAGCTGTGCTCAGGGCT...AGCCAGAATGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGATGTGCACATGGACGTaGGTTATCTTGATCATCAGC +
Preference number: 4 (lower is better)
Translates to: GAVTASQCVMKFQRPPQWMCTWT*VILIIS
Trigger: GCTGATGATCAAGATAACGCACGTCCATGTGCACAT...CCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GAAAGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCGCGTCATACCGCATGTaGACATGGACGTGCGTTATC +
Preference number: 4 (lower is better)
Translates to: ERKVTVLGKQPSKRRLCCASYRM*TWTCVI
Trigger: GATAACGCACGTCCATGTGCACATGCGGTATGACGC...GCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp GCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGAACGTCGTTTGCTTTaGAGGCCGGGAGAAATAAGC +
Preference number: 4 (lower is better)
Translates to: ASQCVMKFQRPPQWQCQLERRLL*RPGEIS
Trigger: GCTTATTTCTCCCGGCCTCCAAAGCAAACGACGTTC...AAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342783.5
CDS-3UTR TCA 90 bp TGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTGTTTAAACCAGAGTaGGTACCTGGAGACCTTGGT +
Preference number: 4 (lower is better)
Translates to: CVMKFQRPPQWQCQLGIPLFKPE*VPGDLG
Trigger: ACCAAGGTCTCCAGGTACTCACTCTGGTTTAAACAG...CGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp GCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCAATGTGCACATGGACGTaGGTTATCTTGATCATCAGC +
Preference number: 4 (lower is better)
Translates to: ALHSGSASLESRFRLCCSMCTWT*VILIIS
Trigger: GCTGATGATCAAGATAACGCACGTCCATGTGCACAT...TGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp ACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGAAAGAAAGGTCACAGTaGTCGGTAAACAACCCAGCA +
Preference number: 4 (lower is better)
Translates to: TASQCVMKFQRPPQWQCQKERSQ*SVNNPA
Trigger: TGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTT...CTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp CAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCAGAAATAAGCTTTCCTaGACGCCTGTGCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QCVMKFQRPPQWQCQLGIRNKLS*TPVQAE
Trigger: CTCTGCCTGCACAGGCGTCCAGGAAAGCTTATTTCT...GATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342783.5
CDS-3UTR CCA 90 bp CAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCATTCTGGCTGTAGGATTCCTGTCCTaGGAGGCAGAAGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: QWQCQLGIPLPVVLFILAVGFLS*EAEVLT
Trigger: TGTCAACACTTCTGCCTCCCAGGACAGGAATCCTAC...AGCCAGAATGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp CAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCATTCTGGCTTACCGCATGTGCACATaGACGTGCGTTATCTTGATC +
Preference number: 4 (lower is better)
Translates to: QWQCQLGIPLPVVLFILAYRMCT*TCVILI
Trigger: GATCAAGATAACGCACGTCCATGTGCACATGCGGTA...AGCCAGAATGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp TCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCTTCAAACACTTCTCTTaGTTCTTCATAGACACAGAT +
Preference number: 4 (lower is better)
Translates to: SQCSVNNPANGGSAAAWAFKHFS*FFIDTD
Trigger: ATCTGTGTCTATGAAGAAGCAAGAGAAGTGTTTGAA...GGCCCACGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp ATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGATCATCAGCGGGTCTTaGCTCGTTCTGTTAAAATAT +
Preference number: 4 (lower is better)
Translates to: MKFQRPPQWQCQLGIPLPIISGS*LVLLKY
Trigger: ATATTTTAACAGAACGAGCCAAGACCCGCTGATGAT...CGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CCA 90 bp TGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGATCATCAGCGGGTCTTaGCTCGTTCTGTTAAAATAT +
Preference number: 4 (lower is better)
Translates to: CVMKFQRPPQWQCQLGIPIISGS*LVLLKY
Trigger: ATATTTTAACAGAACGAGCCAAGACCCGCTGATGAT...CGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR GCA 90 bp ATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGTTCAAACACTTCTCTTaGTTCTTCATAGACACAGAT +
Preference number: 4 (lower is better)
Translates to: MKFQRPPQWQCQLGIPLPFKHFS*FFIDTD
Trigger: ATCTGTGTCTATGAAGAAGCAAGAGAAGTGTTTGAA...CGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS GCA 90 bp GACAGGCCGCGTGGTCAGCGAGTTGCCCAGGTCAGTGCCATTGCGTaGCCAGCCGCTGAGGAGGCCCCTGGTGCGTGGGATGAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: DRPRGQRVAQVSAIA*PAAEEAPGAWDEEV
Trigger: CACCTCCTCATCCCACGCACCAGGGGCCTCCTCAGCGGCTGGGCACGCAATGGCACTGACCTGGGCAACTCGCTGACCACGCGGCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp ACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCAGTGGCAGTGCCAGCTaGGAATCCCGCTTCCGGTTG +
Preference number: 5 (lower is better)
Translates to: TAALLLRGPSGWSGAVTASGSAS*ESRFRL
Trigger: CAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACT...GGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp GGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTGGGAGGCAGAAGTGTaGACACCCATCAGTCCGCTC +
Preference number: 5 (lower is better)
Translates to: GGSAAAWAKRVVWGCDGLWEAEV*TPISPL
Trigger: GAGCGGACTGATGGGTGTCAACACTTCTGCCTCCCA...GAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp ACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTGGGGCACACACTGTTaGTGGTCCTCACCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: TAALLLRGPSGWSGAVTAWGTHC*WSSPSL
Trigger: CAGGCTTGGTGAGGACCACAAACAGTGTGTGCCCCA...GGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS TCA 90 bp GAGCCCCGCACCTGGGCACTGGATGGGCCACTCCAGCTCCAGCAGTaGCAGGTCATTCTCCCCCGCGTCCGCGTCATACCGCATGTGCAC +
Preference number: 5 (lower is better)
Translates to: EPRTWALDGPLQLQQ*QVILPRVRVIPHVH
Trigger: GTGCACATGCGGTATGACGCGGACGCGGGGGAGAATGACCTGTCACTGCTGGAGCTGGAGTGGCCCATCCAGTGCCCAGGTGCGGGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp CTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGACGGCCTCTCAGTGTCGCGTGGTCAGCGAGTaGCCCAGGTCAGTGCCATTG +
Preference number: 5 (lower is better)
Translates to: LLLRGPSGWSGAVTASQCRVVSE*PRSVPL
Trigger: CAATGGCACTGACCTGGGCAACTCGCTGACCACGCG...ACACTGAGAGGCCGTCACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp CAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGTGGGAGGCAGAAGTGTaGACACCCATCAGTCCGCTC +
Preference number: 5 (lower is better)
Translates to: QQTAALLLRGPSGWSGAVWEAEV*TPISPL
Trigger: GAGCGGACTGATGGGTGTCAACACTTCTGCCTCCCA...CACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CCA 90 bp GTCAGTGCCATTGCGTGCCCAGCCGCTGAGGAGGCCCCTGGTGCGTaGGATGAGGAGGTGCTCAGCGAAGTCTTTCTCAGGGGTGCACAC +
Preference number: 5 (lower is better)
Translates to: VSAIACPAAEEAPGA*DEEVLSEVFLRGAH
Trigger: GTGTGCACCCCTGAGAAAGACTTCGCTGAGCACCTCCTCATCCCACGCACCAGGGGCCTCCTCAGCGGCTGGGCACGCAATGGCACTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp GGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCCCAGGTCAGTGCCATaGCGTGCCCAGCCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GAVTASQCVMKFQRPPQWPRSVP*RAQPLR
Trigger: CCTCAGCGGCTGGGCACGCAATGGCACTGACCTGGG...CCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS TCA 90 bp CAGTCACATTCAGGACCTGCCCGCACTCCTCCCCCTCCACAAGTGTaGCAGGCCGCGTGGTCAGCGAGTTGCCCAGGTCAGTGCCATTGC +
Preference number: 5 (lower is better)
Translates to: QSHSGPARTPPPPQV*QAAWSASCPGQCHC
Trigger: GCAATGGCACTGACCTGGGCAACTCGCTGACCACGCGGCCTGTCACACTTGTGGAGGGGGAGGAGTGCGGGCAGGTCCTGAATGTGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CCA 90 bp CCTGGAGACCTTGGTGACAAGGACCATGTGAGCCTGCCCTCCTACTaGCTGCGAGCCCAGGACCCCCGTGAGAAACCAGGAGCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: PGDLGDKDHVSLPSY*LRAQDPREKPGASV
Trigger: CACAGAGGCTCCTGGTTTCTCACGGGGGTCCTGGGCTCGCAGCCAGTAGGAGGGCAGGCTCACATGGTCCTTGTCACCAAGGTCTCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CCA 90 bp TCGTTTGCTTTGGAGGCCGGGAGAAATACTGAGGGCTCCACACGATaGAGGGCGAGGACCAGGACCAGGCCCTGGAGCAGTGGGACGCAG +
Preference number: 5 (lower is better)
Translates to: SFALEAGRNTEGSTR*RARTRTRPWSSGTQ
Trigger: CTGCGTCCCACTGCTCCAGGGCCTGGTCCTGGTCCTCGCCCTCCATCGTGTGGAGCCCTCAGTATTTCTCCCGGCCTCCAAAGCAAACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375547.7
CDS-3UTR CAA 90 bp CAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGTGGACGTGCGTTATCTaGATCATCAGCGGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: QQTAALLLRGPSGWSGAVWTCVI*IISGSW
Trigger: CCAAGACCCGCTGATGATCAAGATAACGCACGTCCA...CACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp ATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGCCCAGGTCAGTGCCATaGCGTGCCCAGCCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: MKFQRPPQWQCQLGIPLPPRSVP*RAQPLR
Trigger: CCTCAGCGGCTGGGCACGCAATGGCACTGACCTGGG...CGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS TCA 90 bp CCACCTCACCAGAACGTCGTTTGCTTTGGAGGCCGGGAGAAATACTaGGGGCTCCACACGATGGAGGGCGAGGACCAGGACCAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: PPHQNVVCFGGREKY*GLHTMEGEDQDQAL
Trigger: CAGGGCCTGGTCCTGGTCCTCGCCCTCCATCGTGTGGAGCCCTCAGTATTTCTCCCGGCCTCCAAAGCAAACGACGTTCTGGTGAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375547.7
CDS-3UTR CAA 90 bp CAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCAAGCGGGTGGTCTGGGGCTGTGAGAACGTCGTTTGCTTaGGAGGCCGGGAGAAATAAG +
Preference number: 5 (lower is better)
Translates to: QQTAALLLRGPSGWSGAVRTSFA*EAGRNK
Trigger: CTTATTTCTCCCGGCCTCCAAAGCAAACGACGTTCT...CACAGCCCCAGACCACCCGCTTGGCCCACGCAGCAGCAGAGCCGCCGTTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342783.5
CDS-3UTR CAA 90 bp ACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGTCCTGGCAAGAGCCGTaGTGGAGGCAGGGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: TASQCVMKFQRPPQWQCQSWQEP*WRQGWE
Trigger: CTCCCAGCCCTGCCTCCACAACGGCTCTTGCCAGGA...CTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS TCA 90 bp AGTGCATGGCCGCCACGCTGCTTCTCTCACAGTAGGTCCTGGTGGTaGCAGTCACATTCAGGACCTGCCCGCACTCCTCCCCCTCCACAA +
Preference number: 5 (lower is better)
Translates to: SAWPPRCFSHSRSWW*QSHSGPARTPPPPQ
Trigger: TTGTGGAGGGGGAGGAGTGCGGGCAGGTCCTGAATGTGACTGTCACCACCAGGACCTACTGTGAGAGAAGCAGCGTGGCGGCCATGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CCA 90 bp TGCAGGCAGAGTCAGAATGGAGTCCATGTCGTTCCTTCAGTGAAGTaGCTGAGGGCTCCACACGATGGAGGGCGAGGACCAGGACCAGGC +
Preference number: 5 (lower is better)
Translates to: CRQSQNGVHVVPSVK*LRAPHDGGRGPGPG
Trigger: GCCTGGTCCTGGTCCTCGCCCTCCATCGTGTGGAGCCCTCAGCCACTTCACTGAAGGAACGACATGGACTCCATTCTGACTCTGCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342783.5
CDS CCA 90 bp GATAGGAGCCCGCACGCTTCCACCTCACCAGAACGTCGTTTGCTTTaGAGGCCGGGAGAAATACTGAGGGCTCCACACGATGGAGGGCGA +
Preference number: 5 (lower is better)
Translates to: DRSPHASTSPERRLL*RPGEILRAPHDGGR
Trigger: TCGCCCTCCATCGTGTGGAGCCCTCAGTATTTCTCCCGGCCTCCAAAGCAAACGACGTTCTGGTGAGGTGGAAGCGTGCGGGCTCCTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375547.7
CDS-3UTR CAA 90 bp GCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCAAGTGGCAGTGCCAGCTaGGAATCCCGCTTCCGGTTG +
Preference number: 5 (lower is better)
Translates to: ALHSGSASLESRFRLCCSSGSAS*ESRFRL
Trigger: CAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACT...TGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS TCA 90 bp TTAAACCAGAGTGAGTACCTGGAGACCTTGGTGACAAGGACCATGTaGGCCTGCCCTCCTACTGGCTGCGAGCCCAGGACCCCCGTGAGA +
Preference number: 5 (lower is better)
Translates to: LNQSEYLETLVTRTM*ACPPTGCEPRTPVR
Trigger: TCTCACGGGGGTCCTGGGCTCGCAGCCAGTAGGAGGGCAGGCTCACATGGTCCTTGTCACCAAGGTCTCCAGGTACTCACTCTGGTTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp TCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGTGGGCCTGGACGTGCGTTATCTaGATCATCAGCGGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: SQCSVNNPANGGSAAAWAWTCVI*IISGSW
Trigger: CCAAGACCCGCTGATGATCAAGATAACGCACGTCCA...GGCCCACGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp GAAAGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCCGCGTGGTCAGCGAGTaGCCCAGGTCAGTGCCATTG +
Preference number: 5 (lower is better)
Translates to: ERKVTVLGKQPSKRRLCCRVVSE*PRSVPL
Trigger: CAATGGCACTGACCTGGGCAACTCGCTGACCACGCG...GCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS GCA 90 bp AGCAGTGACAGGTCATTCTCCCCCGCGTCCGCGTCATACCGCATGTaGACATGGACGTGCGTTATCTTGATCATCAGCGGGTCTTGGCTC +
Preference number: 5 (lower is better)
Translates to: SSDRSFSPASASYRM*TWTCVILIISGSWL
Trigger: GAGCCAAGACCCGCTGATGATCAAGATAACGCACGTCCATGTGCACATGCGGTATGACGCGGACGCGGGGGAGAATGACCTGTCACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS GCA 90 bp AGGGCTGCACCTCAACTCAGGCAGGAGATAATTGTGTTAGAGGCCTaGCACGGGAGGTCCTGTAGATCCGGTGCACGCTTCTCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: RAAPQLRQEIIVLEA*HGRSCRSGARFSEV
Trigger: GACCTCTGAGAAGCGTGCACCGGATCTACAGGACCTCCCGTGGCAGGCCTCTAACACAATTATCTCCTGCCTGAGTTGAGGTGCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493630.1
CDS GCA 90 bp ACACGGCAGCCACACTCGGGTACGGAGCATTGTGGACACGAGGGCTaGACCTCAACTCAGGCAGGAGATAATTGTGTTAGAGGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: TRQPHSGTEHCGHEG*TSTQAGDNCVRGLP
Trigger: TGGCAGGCCTCTAACACAATTATCTCCTGCCTGAGTTGAGGTGCAGCCCTCGTGTCCACAATGCTCCGTACCCGAGTGTGGCTGCCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493630.1
CDS CCA 90 bp GACAGGTCATTCTCCCCCGCGTCCGCGTCATACCGCATGTGCACATaGACGTGCGTTATCTTGATCATCAGCGGGTCTTGGCTCGTTCTG +
Preference number: 5 (lower is better)
Translates to: DRSFSPASASYRMCT*TCVILIISGSWLVL
Trigger: CAGAACGAGCCAAGACCCGCTGATGATCAAGATAACGCACGTCCATGTGCACATGCGGTATGACGCGGACGCGGGGGAGAATGACCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp GCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCATCACCAGAACGTCGTTaGCTTTGGAGGCCGGGAGAA +
Preference number: 5 (lower is better)
Translates to: ALHSGSASLESRFRLCCSSPERR*LWRPGE
Trigger: TTCTCCCGGCCTCCAAAGCAAACGACGTTCTGGTGA...TGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp AGAGTTCCAGGGAAAGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCTCCTGGCAAGAGCCGTaGTGGAGGCAGGGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RVPGKERSQCSVNNPANGSWQEP*WRQGWE
Trigger: CTCCCAGCCCTGCCTCCACAACGGCTCTTGCCAGGA...GCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCTTTCCCTGGAACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CCA 90 bp AAGCCTGTAGCCCTGAGCACAGCTGCATGTGTAGGATTCCTGTCCTaGGAGGCAGAAGTGTTGACACCCATCAGTCCGCTCTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: KPVALSTAACVGFLS*EAEVLTPISPLWVT
Trigger: TGTCACCCAGAGCGGACTGATGGGTGTCAACACTTCTGCCTCCCAGGACAGGAATCCTACACATGCAGCTGTGCTCAGGGCTACAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342783.5
ENST00000375547.7
ENST00000493630.1
CDS-3UTR CAA 90 bp AGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCTCACCAGAACGTCGTTaGCTTTGGAGGCCGGGAGAA +
Preference number: 5 (lower is better)
Translates to: RKVTVLGKQPSKRRLCCCSPERR*LWRPGE
Trigger: TTCTCCCGGCCTCCAAAGCAAACGACGTTCTGGTGA...GCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp ACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCATTCTGGCTGGGGCACACACTGTTaGTGGTCCTCACCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: TVAVPAWNPASGCVVHSGWGTHC*WSSPSL
Trigger: CAGGCTTGGTGAGGACCACAAACAGTGTGTGCCCCA...GCCAGAATGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS GCA 90 bp CACACTGTTTGTGGTCCTCACCAAGCCTGTAGCCCTGAGCACAGCTaGATGTGTAGGATTCCTGTCCTGGGAGGCAGAAGTGTTGACACC +
Preference number: 5 (lower is better)
Translates to: HTVCGPHQACSPEHS*MCRIPVLGGRSVDT
Trigger: GGTGTCAACACTTCTGCCTCCCAGGACAGGAATCCTACACATGCAGCTGTGCTCAGGGCTACAGGCTTGGTGAGGACCACAAACAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342783.5
ENST00000375547.7
ENST00000493630.1
CDS-3UTR CAA 90 bp GAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGAGAACGTCGTTTGCTTaGGAGGCCGGGAGAAATACT +
Preference number: 5 (lower is better)
Translates to: ERSQCSVNNPANGGSAAARTSFA*EAGRNT
Trigger: AGTATTTCTCCCGGCCTCCAAAGCAAACGACGTTCT...CGCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375547.7
CDS-3UTR CAA 90 bp CTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGGAATCCCGCTTCCGGTaGTGTTGTTCATTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: LSVCDEVSAPSTVAVPAWESRFR*CCSFWL
Trigger: TAGCCAGAATGAACAACACAACCGGAAGCGGGATTC...CCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS GCA 90 bp TCATTCTCCCCCGCGTCCGCGTCATACCGCATGTGCACATGGACGTaGGTTATCTTGATCATCAGCGGGTCTTGGCTCGTTCTGTTAAAA +
Preference number: 5 (lower is better)
Translates to: SFSPASASYRMCTWT*VILIISGSWLVLLK
Trigger: TTTTAACAGAACGAGCCAAGACCCGCTGATGATCAAGATAACGCACGTCCATGTGCACATGCGGTATGACGCGGACGCGGGGGAGAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp TGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGATCATCAGCGGGTCTaGGCTCGTTCTGTTAAAATA +
Preference number: 5 (lower is better)
Translates to: WGCDGLSVCDEVSAPSTVDHQRV*ARSVKI
Trigger: TATTTTAACAGAACGAGCCAAGACCCGCTGATGATC...CACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp ACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCATTCTGGCGAATCCCGCTTCCGGTaGTGTTGTTCATTCTGGCTA +
Preference number: 5 (lower is better)
Translates to: TVAVPAWNPASGCVVHSGESRFR*CCSFWL
Trigger: TAGCCAGAATGAACAACACAACCGGAAGCGGGATTC...GCCAGAATGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp TGGGGCTGTGACGGCCTCTCAGTGTGTGATGAAGTTTCAGCGCCCTCCACAGTGCTTTTCCTTCGGAATTaGTTAACTTTACCTGCCACG +
Preference number: 5 (lower is better)
Translates to: WGCDGLSVCDEVSAPSTVLFLRN*LTLPAT
Trigger: CGTGGCAGGTAAAGTTAACAAATTCCGAAGGAAAAG...CACTGTGGAGGGCGCTGAAACTTCATCACACACTGAGAGGCCGTCACAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp AGAAAGGTCACAGTGCTCGGTAAACAACCCAGCAAACGGCGGCTCTGCTGCTGCGATCATCAGCGGGTCTaGGCTCGTTCTGTTAAAATA +
Preference number: 5 (lower is better)
Translates to: RKVTVLGKQPSKRRLCCCDHQRV*ARSVKI
Trigger: TATTTTAACAGAACGAGCCAAGACCCGCTGATGATC...GCAGCAGCAGAGCCGCCGTTTGCTGGGTTGTTTACCGAGCACTGTGACCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS-3UTR CAA 90 bp TGTGTGATGAAGTTTCAGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTTTCCTTCGGAATTaGTTAACTTTACCTGCCACG +
Preference number: 5 (lower is better)
Translates to: CVMKFQRPPQWQCQLGIPLFLRN*LTLPAT
Trigger: CGTGGCAGGTAAAGTTAACAAATTCCGAAGGAAAAG...CGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCTGAAACTTCATCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS TCA 90 bp TGGCTAGCTGAGTTTCAGTTAGTTCATGATCTGTTTAAACCAGAGTaGGTACCTGGAGACCTTGGTGACAAGGACCATGTGAGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: WLAEFQLVHDLFKPE*VPGDLGDKDHVSLP
Trigger: GGGCAGGCTCACATGGTCCTTGTCACCAAGGTCTCCAGGTACTCACTCTGGTTTAAACAGATCATGAACTAACTGAAACTCAGCTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CCA 90 bp GGCAGTGCCAGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCATTCTaGCTAGCTGAGTTTCAGTTAGTTCATGATCTGTTTAAACCAGAG +
Preference number: 5 (lower is better)
Translates to: GSASLESRFRLCCSF*LAEFQLVHDLFKPE
Trigger: CTCTGGTTTAAACAGATCATGAACTAACTGAAACTCAGCTAGCCAGAATGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CAA 90 bp AGTGTGACAGGCCGCGTGGTCAGCGAGTTGCCCAGGTCAGTGCCATaGCGTGCCCAGCCGCTGAGGAGGCCCCTGGTGCGTGGGATGAGG +
Preference number: 6 (lower is better)
Translates to: SVTGRVVSELPRSVP*RAQPLRRPLVRGMR
Trigger: CCTCATCCCACGCACCAGGGGCCTCCTCAGCGGCTGGGCACGCAATGGCACTGACCTGGGCAACTCGCTGACCACGCGGCCTGTCACACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CAA 90 bp CACTCCTCCCCCTCCACAAGTGTGACAGGCCGCGTGGTCAGCGAGTaGCCCAGGTCAGTGCCATTGCGTGCCCAGCCGCTGAGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: HSSPSTSVTGRVVSE*PRSVPLRAQPLRRP
Trigger: GGGCCTCCTCAGCGGCTGGGCACGCAATGGCACTGACCTGGGCAACTCGCTGACCACGCGGCCTGTCACACTTGTGGAGGGGGAGGAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS GCA 72 bp CGTGGTCAGCGAGTTGCCCAGGTCAGTGCCATTGCGTaGCCAGCCGCTGAGGAGGCCCCTGGTGCGTGGGAT +
Preference number: 6 (lower is better)
Translates to: RGQRVAQVSAIA*PAAEEAPGAWD
Trigger: ATCCCACGCACCAGGGGCCTCCTCAGCGGCTGGGCACGCAATGGCACTGACCTGGGCAACTCGCTGACCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS GCA 72 bp CCGCTGAGGAGGCCCCTGGTGCGTGGGATGAGGAGGTaGTCAGCGAAGTCTTTCTCAGGGGTGCACACGGGG +
Preference number: 6 (lower is better)
Translates to: PLRRPLVRGMRR*SAKSFSGVHTG
Trigger: CCCCGTGTGCACCCCTGAGAAAGACTTCGCTGAGCACCTCCTCATCCCACGCACCAGGGGCCTCCTCAGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CCA 72 bp GGGTGCACACGGGGAGCCCCGCACCTGGGCACTGGATaGGCCACTCCAGCTCCAGCAGTGACAGGTCATTCT +
Preference number: 6 (lower is better)
Translates to: GCTRGAPHLGTG*ATPAPAVTGHS
Trigger: AGAATGACCTGTCACTGCTGGAGCTGGAGTGGCCCATCCAGTGCCCAGGTGCGGGGCTCCCCGTGTGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CAA 72 bp CCCTCCACAAGTGTGACAGGCCGCGTGGTCAGCGAGTaGCCCAGGTCAGTGCCATTGCGTGCCCAGCCGCTG +
Preference number: 6 (lower is better)
Translates to: PSTSVTGRVVSE*PRSVPLRAQPL
Trigger: CAGCGGCTGGGCACGCAATGGCACTGACCTGGGCAACTCGCTGACCACGCGGCCTGTCACACTTGTGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS TCA 72 bp ACCTGGGCACTGGATGGGCCACTCCAGCTCCAGCAGTaGCAGGTCATTCTCCCCCGCGTCCGCGTCATACCG +
Preference number: 6 (lower is better)
Translates to: TWALDGPLQLQQ*QVILPRVRVIP
Trigger: CGGTATGACGCGGACGCGGGGGAGAATGACCTGTCACTGCTGGAGCTGGAGTGGCCCATCCAGTGCCCAGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CCA 72 bp ATTGCGTGCCCAGCCGCTGAGGAGGCCCCTGGTGCGTaGGATGAGGAGGTGCTCAGCGAAGTCTTTCTCAGG +
Preference number: 6 (lower is better)
Translates to: IACPAAEEAPGA*DEEVLSEVFLR
Trigger: CCTGAGAAAGACTTCGCTGAGCACCTCCTCATCCCACGCACCAGGGGCCTCCTCAGCGGCTGGGCACGCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CAA 72 bp GCCATCCACACGGCAGCCACACTCGGGTACGGAGCATaGTGGACACGAGGGCTGCACCTCAACTCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: AIHTAATLGYGA*WTRGLHLNSGR
Trigger: CCTGCCTGAGTTGAGGTGCAGCCCTCGTGTCCACAATGCTCCGTACCCGAGTGTGGCTGCCGTGTGGATGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493630.1
CDS CCA 72 bp CTTGGTGACAAGGACCATGTGAGCCTGCCCTCCTACTaGCTGCGAGCCCAGGACCCCCGTGAGAAACCAGGA +
Preference number: 6 (lower is better)
Translates to: LGDKDHVSLPSY*LRAQDPREKPG
Trigger: TCCTGGTTTCTCACGGGGGTCCTGGGCTCGCAGCCAGTAGGAGGGCAGGCTCACATGGTCCTTGTCACCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS TCA 72 bp AGTGAGTACCTGGAGACCTTGGTGACAAGGACCATGTaGGCCTGCCCTCCTACTGGCTGCGAGCCCAGGACC +
Preference number: 6 (lower is better)
Translates to: SEYLETLVTRTM*ACPPTGCEPRT
Trigger: GGTCCTGGGCTCGCAGCCAGTAGGAGGGCAGGCTCACATGGTCCTTGTCACCAAGGTCTCCAGGTACTCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CCA 72 bp ATCCACACGGCAGCCACACTCGGGTACGGAGCATTGTaGACACGAGGGCTGCACCTCAACTCAGGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: IHTAATLGYGAL*TRGLHLNSGRR
Trigger: TCTCCTGCCTGAGTTGAGGTGCAGCCCTCGTGTCCACAATGCTCCGTACCCGAGTGTGGCTGCCGTGTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493630.1
CDS TCA 72 bp CAGAACGTCGTTTGCTTTGGAGGCCGGGAGAAATACTaGGGGCTCCACACGATGGAGGGCGAGGACCAGGAC +
Preference number: 6 (lower is better)
Translates to: QNVVCFGGREKY*GLHTMEGEDQD
Trigger: GTCCTGGTCCTCGCCCTCCATCGTGTGGAGCCCTCAGTATTTCTCCCGGCCTCCAAAGCAAACGACGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375547.7
CDS CAA 72 bp CCCGCACGCTTCCACCTCACCAGAACGTCGTTTGCTTaGGAGGCCGGGAGAAATACTGAGGGCTCCACACGA +
Preference number: 6 (lower is better)
Translates to: PARFHLTRTSFA*EAGRNTEGSTR
Trigger: TCGTGTGGAGCCCTCAGTATTTCTCCCGGCCTCCAAAGCAAACGACGTTCTGGTGAGGTGGAAGCGTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375547.7
CDS CAA 72 bp AGGAGCCCGCACGCTTCCACCTCACCAGAACGTCGTTaGCTTTGGAGGCCGGGAGAAATACTGAGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: RSPHASTSPERR*LWRPGEILRAP
Trigger: TGGAGCCCTCAGTATTTCTCCCGGCCTCCAAAGCAAACGACGTTCTGGTGAGGTGGAAGCGTGCGGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375547.7
CDS CAA 90 bp CCAGAAGATAGGAGCCCGCACGCTTCCACCTCACCAGAACGTCGTTaGCTTTGGAGGCCGGGAGAAATAAGCTTTCCTGGACGCCTGTGC +
Preference number: 6 (lower is better)
Translates to: PEDRSPHASTSPERR*LWRPGEISFPGRLC
Trigger: GCACAGGCGTCCAGGAAAGCTTATTTCTCCCGGCCTCCAAAGCAAACGACGTTCTGGTGAGGTGGAAGCGTGCGGGCTCCTATCTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342783.5
CDS CAA 90 bp CCAGAAGATAGGAGCCCGCACGCTTCCACCTCACCAGAACGTCGTTaGCTTTGGAGGCCGGGAGAAATACTGAGGGCTCCACACGATGGA +
Preference number: 6 (lower is better)
Translates to: PEDRSPHASTSPERR*LWRPGEILRAPHDG
Trigger: TCCATCGTGTGGAGCCCTCAGTATTTCTCCCGGCCTCCAAAGCAAACGACGTTCTGGTGAGGTGGAAGCGTGCGGGCTCCTATCTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375547.7
CDS GCA 72 bp CCCGCGTCCGCGTCATACCGCATGTGCACATGGACGTaGGTTATCTTGATCATCAGCGGGTCTTGGCTCGTT +
Preference number: 6 (lower is better)
Translates to: PASASYRMCTWT*VILIISGSWLV
Trigger: AACGAGCCAAGACCCGCTGATGATCAAGATAACGCACGTCCATGTGCACATGCGGTATGACGCGGACGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS GCA 72 bp AGGTCATTCTCCCCCGCGTCCGCGTCATACCGCATGTaGACATGGACGTGCGTTATCTTGATCATCAGCGGG +
Preference number: 6 (lower is better)
Translates to: RSFSPASASYRM*TWTCVILIISG
Trigger: CCCGCTGATGATCAAGATAACGCACGTCCATGTGCACATGCGGTATGACGCGGACGCGGGGGAGAATGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CCA 72 bp CCGCACGCTTCCACCTCACCAGAACGTCGTTTGCTTTaGAGGCCGGGAGAAATAAGCTTTCCTGGACGCCTG +
Preference number: 6 (lower is better)
Translates to: PHASTSPERRLL*RPGEISFPGRL
Trigger: CAGGCGTCCAGGAAAGCTTATTTCTCCCGGCCTCCAAAGCAAACGACGTTCTGGTGAGGTGGAAGCGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342783.5
CDS CCA 72 bp TTCTCCCCCGCGTCCGCGTCATACCGCATGTGCACATaGACGTGCGTTATCTTGATCATCAGCGGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: FSPASASYRMCT*TCVILIISGSW
Trigger: CCAAGACCCGCTGATGATCAAGATAACGCACGTCCATGTGCACATGCGGTATGACGCGGACGCGGGGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CCA 72 bp CCGCACGCTTCCACCTCACCAGAACGTCGTTTGCTTTaGAGGCCGGGAGAAATACTGAGGGCTCCACACGAT +
Preference number: 6 (lower is better)
Translates to: PHASTSPERRLL*RPGEILRAPHD
Trigger: ATCGTGTGGAGCCCTCAGTATTTCTCCCGGCCTCCAAAGCAAACGACGTTCTGGTGAGGTGGAAGCGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375547.7
CDS CAA 72 bp CCCGCACGCTTCCACCTCACCAGAACGTCGTTTGCTTaGGAGGCCGGGAGAAATAAGCTTTCCTGGACGCCT +
Preference number: 6 (lower is better)
Translates to: PARFHLTRTSFA*EAGRNKLSWTP
Trigger: AGGCGTCCAGGAAAGCTTATTTCTCCCGGCCTCCAAAGCAAACGACGTTCTGGTGAGGTGGAAGCGTGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342783.5
CDS GCA 72 bp CCTCAACTCAGGCAGGAGATAATTGTGTTAGAGGCCTaGCACGGGAGGTCCTGTAGATCCGGTGCACGCTTC +
Preference number: 6 (lower is better)
Translates to: PQLRQEIIVLEA*HGRSCRSGARF
Trigger: GAAGCGTGCACCGGATCTACAGGACCTCCCGTGGCAGGCCTCTAACACAATTATCTCCTGCCTGAGTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493630.1
CDS CCA 72 bp AGTCAGAATGGAGTCCATGTCGTTCCTTCAGTGAAGTaGCTGAGGGCTCCACACGATGGAGGGCGAGGACCA +
Preference number: 6 (lower is better)
Translates to: SQNGVHVVPSVK*LRAPHDGGRGP
Trigger: TGGTCCTCGCCCTCCATCGTGTGGAGCCCTCAGCCACTTCACTGAAGGAACGACATGGACTCCATTCTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342783.5
CDS CAA 72 bp AGGAGCCCGCACGCTTCCACCTCACCAGAACGTCGTTaGCTTTGGAGGCCGGGAGAAATAAGCTTTCCTGGA +
Preference number: 6 (lower is better)
Translates to: RSPHASTSPERR*LWRPGEISFPG
Trigger: TCCAGGAAAGCTTATTTCTCCCGGCCTCCAAAGCAAACGACGTTCTGGTGAGGTGGAAGCGTGCGGGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342783.5
CDS GCA 72 bp TGGAGGCCGGGAGAAATAAGCTTTCCTGGACGCCTGTaGAGGCAGAGTCAGAATGGAGTCCATGTCGTTCCT +
Preference number: 6 (lower is better)
Translates to: WRPGEISFPGRL*RQSQNGVHVVP
Trigger: AGGAACGACATGGACTCCATTCTGACTCTGCCTGCACAGGCGTCCAGGAAAGCTTATTTCTCCCGGCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342783.5
CDS GCA 72 bp CCACACTCGGGTACGGAGCATTGTGGACACGAGGGCTaGACCTCAACTCAGGCAGGAGATAATTGTGTTAGA +
Preference number: 6 (lower is better)
Translates to: PHSGTEHCGHEG*TSTQAGDNCVR
Trigger: TCTAACACAATTATCTCCTGCCTGAGTTGAGGTGCAGCCCTCGTGTCCACAATGCTCCGTACCCGAGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493630.1
CDS CCA 72 bp AAGCTTTCCTGGACGCCTGTGCAGGCAGAGTCAGAATaGAGTCCATGTCGTTCCTTCAGTGAAGTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: KLSWTPVQAESE*SPCRSFSEVAE
Trigger: CTCAGCCACTTCACTGAAGGAACGACATGGACTCCATTCTGACTCTGCCTGCACAGGCGTCCAGGAAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342783.5
CDS CCA 72 bp TGGGAGGCAGAAGTGTTGACACCCATCAGTCCGCTCTaGGTGACATTCATTTTTAGCCAGCTCGCAGTTGCT +
Preference number: 6 (lower is better)
Translates to: WEAEVLTPISPL*VTFIFSQLAVA
Trigger: AGCAACTGCGAGCTGGCTAAAAATGAATGTCACCCAGAGCGGACTGATGGGTGTCAACACTTCTGCCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CAA 72 bp GCATGTGTAGGATTCCTGTCCTGGGAGGCAGAAGTGTaGACACCCATCAGTCCGCTCTGGGTGACATTCATT +
Preference number: 6 (lower is better)
Translates to: ACVGFLSWEAEV*TPISPLWVTFI
Trigger: AATGAATGTCACCCAGAGCGGACTGATGGGTGTCAACACTTCTGCCTCCCAGGACAGGAATCCTACACATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CAA 90 bp AGCGCCCTCCACAGTGGCAGTGCCAGCTTGGAATCCCGCTTCCGGTaGTGTTGTTCATTCTGGCTAGCTGAGTTTCAGTTAGTTCATGAT +
Preference number: 6 (lower is better)
Translates to: SALHSGSASLESRFR*CCSFWLAEFQLVHD
Trigger: ATCATGAACTAACTGAAACTCAGCTAGCCAGAATGAACAACACAACCGGAAGCGGGATTCCAAGCTGGCACTGCCACTGTGGAGGGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CAA 90 bp CCCGCGTCCGCGTCATACCGCATGTGCACATGGACGTGCGTTATCTaGATCATCAGCGGGTCTTGGCTCGTTCTGTTAAAATATGTTTTT +
Preference number: 6 (lower is better)
Translates to: PASASYRMCTWTCVI*IISGSWLVLLKYVF
Trigger: AAAAACATATTTTAACAGAACGAGCCAAGACCCGCTGATGATCAAGATAACGCACGTCCATGTGCACATGCGGTATGACGCGGACGCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CAA 72 bp GCGTCATACCGCATGTGCACATGGACGTGCGTTATCTaGATCATCAGCGGGTCTTGGCTCGTTCTGTTAAAA +
Preference number: 6 (lower is better)
Translates to: ASYRMCTWTCVI*IISGSWLVLLK
Trigger: TTTTAACAGAACGAGCCAAGACCCGCTGATGATCAAGATAACGCACGTCCATGTGCACATGCGGTATGACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS TCA 72 bp GAGTTTCAGTTAGTTCATGATCTGTTTAAACCAGAGTaGGTACCTGGAGACCTTGGTGACAAGGACCATGTG +
Preference number: 6 (lower is better)
Translates to: EFQLVHDLFKPE*VPGDLGDKDHV
Trigger: CACATGGTCCTTGTCACCAAGGTCTCCAGGTACTCACTCTGGTTTAAACAGATCATGAACTAACTGAAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CCA 72 bp AGCTTGGAATCCCGCTTCCGGTTGTGTTGTTCATTCTaGCTAGCTGAGTTTCAGTTAGTTCATGATCTGTTT +
Preference number: 6 (lower is better)
Translates to: SLESRFRLCCSF*LAEFQLVHDLF
Trigger: AAACAGATCATGAACTAACTGAAACTCAGCTAGCCAGAATGAACAACACAACCGGAAGCGGGATTCCAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7
CDS CCA 72 bp ACATGGACGTGCGTTATCTTGATCATCAGCGGGTCTTaGCTCGTTCTGTTAAAATATGTTTTTACAGTAATA +
Preference number: 6 (lower is better)
Translates to: TWTCVILIISGS*LVLLKYVFTVI
Trigger: TATTACTGTAAAAACATATTTTAACAGAACGAGCCAAGACCCGCTGATGATCAAGATAACGCACGTCCATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342783.5
ENST00000375547.7