RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PROX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000117707

Ensembl transcript IDs: ENST00000261454.8, ENST00000366958.9, ENST00000435016.2, ENST00000471129.1, ENST00000498508.6, ENST00000607425.1, ENST00000607726.1

Found 834 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCTGTCTACACTaGGAGGCCCTGTTAGTCCCCTGGATGGTGCAGGGCATCATAGGA +
Preference number: 1 (lower is better)
Translates to: GGWCPRPCGCTLCLH*EALLVPWMVQGIIG
Trigger: TCCTATGATGCCCTGCACCATCCAGGGGACTAACAGGGCCTCGCAGTGTAGACAGAGGGTGCAGCCACACGGGCGGGGGCACCAGCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR TCA 90 bp AAAAATAACAAATTGGATCTAATGACTCTGTGCATTAGTAGAGTGTaGGCTGGGAGATGTGTGAGGCCGCGGGTGCAGAGTGAGGTGGCT +
Preference number: 1 (lower is better)
Translates to: KNNKLDLMTLCISRV*AGRCVRPRVQSEVA
Trigger: AGCCACCTCACTCTGCACCCGCGGCCTCACACATCTCCCAGCTCACACTCTACTAATGCACAGAGTCATTAGATCCAATTTGTTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR GCA 90 bp TTCTTAGCAGTAGAAACAAGAGACACATCACTGTCTGTAGAGTTGTaGTGTGTCATGGGTTTTCCTCAGCCAACCGCCATTTGCAATAAG +
Preference number: 1 (lower is better)
Translates to: FLAVETRDTSLSVEL*CVMGFPQPTAICNK
Trigger: CTTATTGCAAATGGCGGTTGGCTGAGGAAAACCCATGACACAGCACAACTCTACAGACAGTGATGTGTCTCTTGTTTCTACTGCTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
3UTR CCA 90 bp ACAAGCTTGCATATATACTGCACATACATTCAGTTTAAGAGGAGATaGAAGGCACACAAGGCAATTGGACTACTGTATCCTTTAAGTGGT +
Preference number: 1 (lower is better)
Translates to: TSLHIYCTYIQFKRR*KAHKAIGLLYPLSG
Trigger: ACCACTTAAAGGATACAGTAGTCCAATTGCCTTGTGTGCCTTCCATCTCCTCTTAAACTGAATGTATGTGCAGTATATATGCAAGCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR GCA 90 bp GAGCTTGTAATGTATATTTTATTTTGCACAAGCTTGCATATATACTaGACATACATTCAGTTTAAGAGGAGATGGAAGGCACACAAGGCA +
Preference number: 1 (lower is better)
Translates to: ELVMYILFCTSLHIY*TYIQFKRRWKAHKA
Trigger: TGCCTTGTGTGCCTTCCATCTCCTCTTAAACTGAATGTATGTGCAGTATATATGCAAGCTTGTGCAAAATAAAATATACATTACAAGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR TCA 90 bp CACAGAGTTTGTACCAGAAGGAAACATTTGTACTATTCACACCAATaGATACGCTATAATATACATGGCAAAGAGATTTTTGCACTGTCT +
Preference number: 1 (lower is better)
Translates to: HRVCTRRKHLYYSHQ*IRYNIHGKEIFALS
Trigger: AGACAGTGCAAAAATCTCTTTGCCATGTATATTATAGCGTATTCATTGGTGTGAATAGTACAAATGTTTCCTTCTGGTACAAACTCTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR TCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTGTCAATACTAGCTTCTaGATTGGAAGAGGCATTATC +
Preference number: 2 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPVNTSF*IGRGII
Trigger: GATAATGCCTCTTCCAATTCAGAAGCTAGTATTGAC...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR TCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTAAAATGAAGAAACACTaGGTTAGACTGTCACCACTT +
Preference number: 2 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPKMKKH*VRLSPL
Trigger: AAGTGGTGACAGTCTAACTCAGTGTTTCTTCATTTT...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTCCCCGCCCGTGTGGCTaGACCCTCTGTCTACACTGC +
Preference number: 2 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPPRPCG*TLCLHC
Trigger: GCAGTGTAGACAGAGGGTGCAGCCACACGGGCGGGG...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR TCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGCCGCGGGTGCAGAGTaGGGTGGCTGGTGCCCCCGC +
Preference number: 2 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVAAGAE*GGWCPR
Trigger: GCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGGGTGCAGAGTGAGGTaGCTGGTGCCCCCGCCCGTG +
Preference number: 2 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVGCRVR*LVPPPV
Trigger: CACGGGCGGGGGCACCAGCCACCTCACTCTGCACCC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGGGTGCAGAGTGAGGTaGCTGGTGCCCCCGCCCGTG +
Preference number: 2 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVGCRVR*LVPPPV
Trigger: CACGGGCGGGGGCACCAGCCACCTCACTCTGCACCC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTACCCCGCCCGTGTGGCTaGACCCTCTGTCTACACTGC +
Preference number: 2 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVPRPCG*TLCLHC
Trigger: GCAGTGTAGACAGAGGGTGCAGCCACACGGGCGGGG...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGTGCCCCCGCCCGTGTaGCTGCACCCTCTGTCTACA +
Preference number: 2 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVVPPPV*LHPLST
Trigger: TGTAGACAGAGGGTGCAGCCACACGGGCGGGGGCAC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR TCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTCCAGTCAGAAAACTGTaGCTACAAGTTGGGATTACT +
Preference number: 2 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPPVRKL*LQVGIT
Trigger: AGTAATCCCAACTTGTAGTCACAGTTTTCTGACTGG...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCACCCTCTGTCTACACTaGGAGGCCCTGTTAGTCCCC +
Preference number: 2 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVTLCLH*EALLVP
Trigger: GGGGACTAACAGGGCCTCGCAGTGTAGACAGAGGGT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTACATCCAAAGGGGACTaGTACTCTTCATACATTCAA +
Preference number: 2 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPTSKGD*YSSYIQ
Trigger: TTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGT...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTTGTGCAAAATTGCTTTaGCTCCAGAAGAAACTGGTA +
Preference number: 2 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPCAKLL*LQKKLV
Trigger: TACCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACA...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR TCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTAAAATGAAGAAACACTaGGTTAGACTGTCACCACTT +
Preference number: 2 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPKMKKH*VRLSPL
Trigger: AAGTGGTGACAGTCTAACTCAGTGTTTCTTCATTTT...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR CAA 90 bp ACCTTCTTAGCAGTAGAAACAAGAGACACATCACTGTCTGTAGAGTaGTGCTGTGTCATGGGTTTTCCTCAGCCAACCGCCATTTGCAAT +
Preference number: 2 (lower is better)
Translates to: TFLAVETRDTSLSVE*CCVMGFPQPTAICN
Trigger: ATTGCAAATGGCGGTTGGCTGAGGAAAACCCATGACACAGCACAACTCTACAGACAGTGATGTGTCTCTTGTTTCTACTGCTAAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
3UTR-3UTR CCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATACAGCAAAAACCCAGTaGCACACTGACACGAACAAG +
Preference number: 2 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANTAKTQ*HTDTNK
Trigger: CTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGT...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR TCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGGGTACTTTGGAAAAGTaGGCTGCTCATCTGTCATTG +
Preference number: 2 (lower is better)
Translates to: HLERAGFVQNCFASRRNWGTLEK*AAHLSL
Trigger: CAATGACAGATGAGCAGCTCACTTTTCCAAAGTACC...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR TCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGAGAGAAGGCTCAGTTaGAAAGACTCAAAGTCCAGA +
Preference number: 2 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVERRLS*KDSKSR
Trigger: TCTGGACTTTGAGTCTTTTCAACTGAGCCTTCTCTC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGCAGCCAACCGCCATTTaGAATAAGTCATCAATCAAG +
Preference number: 2 (lower is better)
Translates to: HLERAGFVQNCFASRRNWQPTAI*NKSSIK
Trigger: CTTGATTGATGACTTATTGCAAATGGCGGTTGGCTG...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATAGAGAGCTGGTTTTGTaGAAAATTGCTTTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANRELVL*KIALPP
Trigger: TGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCT...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAAGTTGTGCTGTGTCATaGGTTTTCCTCAGCCAACCG +
Preference number: 2 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVSCAVS*VFLSQP
Trigger: CGGTTGGCTGAGGAAAACCCATGACACAGCACAACT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR TCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATGTCAATACTAGCTTCTaGATTGGAAGAGGCATTATC +
Preference number: 2 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANVNTSF*IGRGII
Trigger: GATAATGCCTCTTCCAATTCAGAAGCTAGTATTGAC...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR CAA 90 bp ATTTCTAGTCTCATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTaGCCTCCAGAAGAAACTGGTACGACTTTCAGAGTTTGCCTCTTT +
Preference number: 2 (lower is better)
Translates to: ISSLILRELVLCKIA*PPEETGTTFRVCLF
Trigger: AAAGAGGCAAACTCTGAAAGTCGTACCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATGAGACTAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGGAGGAATTACCAGCTaGTTTCATAACATATCCATG +
Preference number: 2 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGGGITS*FHNISM
Trigger: CATGGATATGTTATGAAATCAGCTGGTAATTCCTCC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
3UTR-3UTR TCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATATGGCAACACAAAGTTaGTATGAATTACACGGAACA +
Preference number: 2 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANMATQS*YELHGT
Trigger: TGTTCCGTGTAATTCATATCAACTTTGTGTTGCCAT...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR TCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCTGCCTCAGTGAACATTaGGAGGATATTATCAGTAGA +
Preference number: 2 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVCLSEH*EDIISR
Trigger: TCTACTGATAATATCCTCTCAATGTTCACTGAGGCA...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR TCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCACATCCCTAGTACAGTaGCAAAGATTCTGCAAACAT +
Preference number: 2 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVTSLVQ*QRFCKH
Trigger: ATGTTTGCAGAATCTTTGTCACTGTACTAGGGATGT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCTGTGCAAAATTGCTTTaGCTCCAGAAGAAACTGGTA +
Preference number: 2 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVCAKLL*LQKKLV
Trigger: TACCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACA...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGGTTTTGTGCAAAATTaGTTTGCCTCCAGAAGAAAC +
Preference number: 2 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVGFVQN*FASRRN
Trigger: GTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAAGACTGTCACCACTTTaGATACCCATCAGGATAGTG +
Preference number: 2 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVRLSPL*IPIRIV
Trigger: CACTATCCTGATGGGTATGCAAAGTGGTGACAGTCT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCTTTGCCTTTTACCTTaGAAATGGCAACACAAAGTT +
Preference number: 2 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANLCLLP*KWQHKV
Trigger: AACTTTGTGTTGCCATTTGCAAGGTAAAAGGCAAAG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTACAGCCAACCGCCATTTaGAATAAGTCATCAATCAAG +
Preference number: 2 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVQPTAI*NKSSIK
Trigger: CTTGATTGATGACTTATTGCAAATGGCGGTTGGCTG...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCACAATGAATTCTTACTaGATCTGGACACAAAAACCC +
Preference number: 2 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVTMNSY*IWTQKP
Trigger: GGGTTTTTGTGTCCAGATGCAGTAAGAATTCATTGT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCAATACACTACAGCTTTaGCTTTTACCTTGCAAATGG +
Preference number: 2 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVNTLQL*LLPCKW
Trigger: CCATTTGCAAGGTAAAAGGCAAAGCTGTAGTGTATT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCACTGTGACTACAAGTTaGGATTACTTCCCTATTTTG +
Preference number: 2 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVTVTTS*DYFPIL
Trigger: CAAAATAGGGAAGTAATCCCAACTTGTAGTCACAGT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCTTTTACCTTGCAAATaGCAACACAAAGTTGATATG +
Preference number: 2 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANLLPCK*QHKVDM
Trigger: CATATCAACTTTGTGTTGCCATTTGCAAGGTAAAAG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR TCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTACTACAAGACCAGGTATaGATTTCTAGTCTCATCTTG +
Preference number: 2 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVLQDQV*ISSLIL
Trigger: CAAGATGAGACTAGAAATTCATACCTGGTCTTGTAG...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGGTTTTGTGCAAAATTaGTTTGCCTCCAGAAGAAAC +
Preference number: 2 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVGFVQN*FASRRN
Trigger: GTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCCAGGATTTTCAAGAATaGTTTCAACTGTCTATACAG +
Preference number: 2 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVQDFQE*FQLSIQ
Trigger: CTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTG...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR TCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGGAGGAATTACCAGCTaGTTTCATAACATATCCATG +
Preference number: 2 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFGGITS*FHNISM
Trigger: CATGGATATGTTATGAAATCAGCTGGTAATTCCTCC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
3UTR-3UTR TCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGTAAGGAAAAGCTACTaGTTGAGTTCAAACCAAACA +
Preference number: 2 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVVRKSY*LSSNQT
Trigger: TGTTTGGTTTGAACTCAATCAGTAGCTTTTCCTTAC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTATTTGGAAAAGTGAGCTaGTCATCTGTCATTGGAATT +
Preference number: 2 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVFGKVS*SSVIGI
Trigger: AATTCCAATGACAGATGAGCAGCTCACTTTTCCAAA...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAACAATGAATTCTTACTaGATCTGGACACAAAAACCC +
Preference number: 2 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVTMNSY*IWTQKP
Trigger: GGGTTTTTGTGTCCAGATGCAGTAAGAATTCATTGT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR CAA 90 bp ATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATaGCTAATAGAGACTTTACACACGCCAACATTCTTTTTCCCTGAA +
Preference number: 2 (lower is better)
Translates to: ISHQSSGCIVNKFPS*LIETLHTPTFFFPE
Trigger: TTCAGGGAAAAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTGATGACTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
3UTR-3UTR TCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGGAGGAATTACCAGCTaGTTTCATAACATATCCATG +
Preference number: 2 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFGGITS*FHNISM
Trigger: CATGGATATGTTATGAAATCAGCTGGTAATTCCTCC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
3UTR-3UTR GCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAACATCCAAAGGGGACTaGTACTCTTCATACATTCAA +
Preference number: 2 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLTSKGD*YSSYIQ
Trigger: TTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
3UTR TCA 72 bp GTGAGCTGGGAGATGTGTGAGGCCGCGGGTGCAGAGTaGGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACC +
Preference number: 3 (lower is better)
Translates to: VSWEMCEAAGAE*GGWCPRPCGCT
Trigger: GGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCCTCACACATCTCCCAGCTCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR CCA 72 bp GGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTaGCTGCACCCTCTGTCTACACTGCGAGGCCCTGTT +
Preference number: 3 (lower is better)
Translates to: GCRVRWLVPPPV*LHPLSTLRGPV
Trigger: AACAGGGCCTCGCAGTGTAGACAGAGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCAAATGTTAAGGGCCTaGGGCAAAAGCAAACTAAAG +
Preference number: 3 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPQMLRA*GKSKLK
Trigger: CTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR CCA 72 bp ACCCTCTGTCTACACTGCGAGGCCCTGTTAGTCCCCTaGATGGTGCAGGGCATCATAGGACTGCACCATTTA +
Preference number: 3 (lower is better)
Translates to: TLCLHCEALLVP*MVQGIIGLHHL
Trigger: TAAATGGTGCAGTCCTATGATGCCCTGCACCATCCAGGGGACTAACAGGGCCTCGCAGTGTAGACAGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTCTAGACACATATAACTaGGACATCCAAAGGGGACTG +
Preference number: 3 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPLDTYN*DIQRGL
Trigger: CAGTCCCCTTTGGATGTCCAAGTTATATGTGTCTAG...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR TCA 72 bp AAATTGGATCTAATGACTCTGTGCATTAGTAGAGTGTaGGCTGGGAGATGTGTGAGGCCGCGGGTGCAGAGT +
Preference number: 3 (lower is better)
Translates to: KLDLMTLCISRV*AGRCVRPRVQS
Trigger: ACTCTGCACCCGCGGCCTCACACATCTCCCAGCTCACACTCTACTAATGCACAGAGTCATTAGATCCAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTTTGTGCAAAATTGCTTaGCCTCCAGAAGAAACTGGT +
Preference number: 3 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPLCKIA*PPEETG
Trigger: ACCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAA...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTATTTCTAGTCTCATCTaGAGAGAGCTGGTTTTGTGC +
Preference number: 3 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPISSLI*RELVLC
Trigger: GCACAAAACCAGCTCTCTCAAGATGAGACTAGAAAT...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTAACTGTGACTACAAGTaGGGATTACTTCCCTATTTT +
Preference number: 3 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPNCDYK*GLLPYF
Trigger: AAAATAGGGAAGTAATCCCAACTTGTAGTCACAGTT...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR TCA 72 bp TGCTTATGTTTGTGCATTCTGAGGGGGTGTCAGATTTaGGAGAAGGCTCAGTTGAAAAGACTCAAAGTCCAG +
Preference number: 3 (lower is better)
Translates to: CLCLCILRGCQI*EKAQLKRLKVQ
Trigger: CTGGACTTTGAGTCTTTTCAACTGAGCCTTCTCTCAAATCTGACACCCCCTCAGAATGCACAAACATAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCCTAGACACATATAACTaGGACATCCAAAGGGGACTG +
Preference number: 3 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGLDTYN*DIQRGL
Trigger: CAGTCCCCTTTGGATGTCCAAGTTATATGTGTCTAG...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
3UTR-3UTR CAA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATAGTCTGGAATCAATATaGAACTCGCCCCAGATCAAA +
Preference number: 3 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANSLESI*NSPQIK
Trigger: TTTGATCTGGGGCGAGTTCAATATTGATTCCAGACT...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCCTTTTCTGCTTATGTTaGTGCATTCTGAGGGGGTGT +
Preference number: 3 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVLFCLC*CILRGC
Trigger: ACACCCCCTCAGAATGCACAAACATAAGCAGAAAAG...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCTTGTGCAAAATTGCTTaGCCTCCAGAAGAAACTGGT +
Preference number: 3 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVLCKIA*PPEETG
Trigger: ACCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAA...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCATTTCTAGTCTCATCTaGAGAGAGCTGGTTTTGTGC +
Preference number: 3 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVISSLI*RELVLC
Trigger: GCACAAAACCAGCTCTCTCAAGATGAGACTAGAAAT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGCTTTGCCTTTTACCTaGCAAATGGCAACACAAAGT +
Preference number: 3 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVALPFT*QMATQS
Trigger: ACTTTGTGTTGCCATTTGCAAGGTAAAAGGCAAAGC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCAGTCTGGAATCAATATaGAACTCGCCCCAGATCAAA +
Preference number: 3 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVSLESI*NSPQIK
Trigger: TTTGATCTGGGGCGAGTTCAATATTGATTCCAGACT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTATTGAGAGAGCTGGTTTaGTGCAAAATTGCTTTGCCT +
Preference number: 3 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVLRELV*CKIALP
Trigger: AGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAA...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCCAGGATAGTGTGGAATaGCTTGTGAAAATATATGTG +
Preference number: 3 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVQDSVE*LVKIYV
Trigger: CACATATATTTTCACAAGCAATTCCACACTATCCTG...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCAACTGTGACTACAAGTaGGGATTACTTCCCTATTTT +
Preference number: 3 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVNCDYK*GLLPYF
Trigger: AAAATAGGGAAGTAATCCCAACTTGTAGTCACAGTT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCATGGCAAAGAGATTTTaGCACTGTCTTCACATATAC +
Preference number: 3 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVMAKRF*HCLHIY
Trigger: GTATATGTGAAGACAGTGCAAAAATCTCTTTGCCAT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCCAAAAGAAGGTAAGCTaGTTTGCCTTTTCTGCTTAT +
Preference number: 3 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVQKKVS*FAFSAY
Trigger: ATAAGCAGAAAAGGCAAACAAGCTTACCTTCTTTTG...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR TCA 72 bp TTTTCAAGTTTAGAGAGGTGGCTACAAGACCAGGTATaGATTTCTAGTCTCATCTTGAGAGAGCTGGTTTTG +
Preference number: 3 (lower is better)
Translates to: FSSLERWLQDQV*ISSLILRELVL
Trigger: CAAAACCAGCTCTCTCAAGATGAGACTAGAAATTCATACCTGGTCTTGTAGCCACCTCTCTAAACTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACTAGACACATATAACTaGGACATCCAAAGGGGACTG +
Preference number: 3 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLLDTYN*DIQRGL
Trigger: CAGTCCCCTTTGGATGTCCAAGTTATATGTGTCTAG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
3UTR-3UTR CAA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTACTGTTAAATAGGAATTaGGAGAGACAGGCTTTTGTC +
Preference number: 3 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVLLNRN*ERQAFV
Trigger: GACAAAAGCCTGTCTCTCCAAATTCCTATTTAACAG...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR CCA 72 bp GTGAATACACTACAGCTTTGCCTTTTACCTTGCAAATaGCAACACAAAGTTGATATGAATTACACGGAACAG +
Preference number: 3 (lower is better)
Translates to: VNTLQLCLLPCK*QHKVDMNYTEQ
Trigger: CTGTTCCGTGTAATTCATATCAACTTTGTGTTGCCATTTGCAAGGTAAAAGGCAAAGCTGTAGTGTATTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR-3UTR CAA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTCAAATGTTAAGGGCCTaGGGCAAAAGCAAACTAAAG +
Preference number: 3 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFQMLRA*GKSKLK
Trigger: CTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTG...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
3UTR TCA 72 bp ATTGCTTGTGAAAATATATGTGTTCCTCTTAGGAGATaGCGATCAAGTCAGCTAATGGCTGTCAACAAACTT +
Preference number: 3 (lower is better)
Translates to: IACENICVPLRR*RSSQLMAVNKL
Trigger: AAGTTTGTTGACAGCCATTAGCTGACTTGATCGTCATCTCCTAAGAGGAACACATATATTTTCACAAGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR TCA 72 bp AGTCAGCAGGTTTTAAGGCTTTGTGCTGACAATAATTaGGTTCATACATTCCTGTCCATCAGCAGAATTTAT +
Preference number: 3 (lower is better)
Translates to: SQQVLRLCADNN*VHTFLSISRIY
Trigger: ATAAATTCTGCTGATGGACAGGAATGTATGAACTCAATTATTGTCAGCACAAAGCCTTAAAACCTGCTGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCCCCGCCCGTGTGGCTaGACCCTCTGTCTACACTGC +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPPRPCG*TLCLHC
Trigger: GCAGTGTAGACAGAGGGTGCAGCCACACGGGCGGGG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCGGTGCAGGGAGCAGTaGGACCGAGCCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPRCREQ*DRASLS
Trigger: AGAGAGAGAGGCTCGGTCCCACTGCTCCCTGCACCG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCCATTTCCTGCTCTCTaGTCAGGGCTCGAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPPFPAL*SGLELG
Trigger: ACCGAGCTCGAGCCCTGATCAGAGAGCAGGAAATGG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTTGCATGTCCTCCAGCTaGTGTTTCAGCTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPCMSSS*CFSCRR
Trigger: GCGCCGACAGCTGAAACAGCAGCTGGAGGACATGCA...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTTGGTGGCTCAGGTGGTaGGATGACATCTTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPWWLRW*DDILVL
Trigger: GAGGACCAAGATGTCATCTCACCACCTGAGCCACCA...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTGGTCAGAGGAGTTTTTaGGGACAACCAGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPGQRSF*GQPGAV
Trigger: CACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACC...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTGCTGAAACCAGCTGCTaGAAACTCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPAETSC*KLCCCC
Trigger: GCAGCAGCAACAGAGTTTCCAGCAGCTGGTTTCAGC...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCGCTGGTTGGCGGTGTaGAAATTGTGGTTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPRWLAV*KLWFSP
Trigger: TGGGGAAAACCACAATTTCCACACCGCCAACCAGCG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTGGCAGTTCGGGGATTTaGAAATCTCAGGGACTTCAC +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPGSSGI*KSQGLH
Trigger: GTGAAGTCCCTGAGATTTTCAAATCCCCGAACTGCC...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCTTCTGTCTGGTCAGTaGAACTGGCCATCTGCACAT +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPLLSGQ*NWPSAH
Trigger: ATGTGCAGATGGCCAGTTCCACTGACCAGACAGAAG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTGGAAACTGGGCTCCGTaGCACCATTTTTGTTCATGT +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPGNWAP*HHFCSC
Trigger: ACATGAACAAAAATGGTGGCACGGAGCCCAGTTTCC...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCCACAACTTGCGACATaGCAGTGTTCAGTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPPQLAT*QCSVPV
Trigger: AACAGGAACTGAACACTGCCATGTCGCAAGTTGTGG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTGGTGAGATGACATCTTaGTCCTCAGACTCGTGGTAT +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPGEMTS*SSDSWY
Trigger: ATACCACGAGTCTGAGGACCAAGATGTCATCTCACC...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTACAGCAAAAACCCAGTaGCACACTGACACGAACAAG +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPTAKTQ*HTDTNK
Trigger: CTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGT...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTTTTCCCCGGCTGCAATaGTGTATTATTTCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPFPRLQ*CIISER
Trigger: GCGCTCTGAAATAATACACCATTGCAGCCGGGGAAA...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTTATCCAGCTTGCAGATaGCCTTGTATATGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPYPACR*PCIWPS
Trigger: AGAAGGCCATATACAAGGTCATCTGCAAGCTGGATA...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTGCCGCGGGTGCAGAGTaGGGTGGCTGGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPAAGAE*GGWCPR
Trigger: GCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGC...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTACTGGACGGTTATTGTaGCATCTTCAAAAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPTGRLL*HLQKLV
Trigger: GACGAGCTTTTGAAGATGGCACAATAACCGTCCAGT...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTAGAGAGCTGGTTTTGTaGAAAATTGCTTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPRELVL*KIALPP
Trigger: TGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCT...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCAGTTTAAGAGGAGATaGAAGGCACACAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPQFKRR*KAHKAI
Trigger: AATTGCCTTGTGTGCCTTCCATCTCCTCTTAAACTG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTACATCCCTAGTACAGTaGCAAAGATTCTGCAAACAT +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPTSLVQ*QRFCKH
Trigger: ATGTTTGCAGAATCTTTGTCACTGTACTAGGGATGT...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTTGTGCAAAATTGCTTTaGCTCCAGAAGAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPCAKLL*LQKKLV
Trigger: TACCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACA...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTACTTCCCGAATAAGGTaGTATTTCAGACATATCTTG +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPTSRIR*YFRHIL
Trigger: CAAGATATGTCTGAAATATCACCTTATTCGGGAAGT...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCATTTTCCGAATCAGTaGTGTCATAGATTTGGTAGA +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPHFPNQ*CHRFGR
Trigger: TCTACCAAATCTATGACAGCACTGATTCGGAAAATG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCTTTGCCTTTTACCTTaGAAATGGCAACACAAAGTT +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPLCLLP*KWQHKV
Trigger: AACTTTGTGTTGCCATTTGCAAGGTAAAAGGCAAAG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCTACTGTCCTACAATTaGATACAGGTCCAAAAATTA +
Preference number: 4 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPLLSYN*IQVQKL
Trigger: TAATTTTTGGACCTGTATCCAATTGTAGGACAGTAG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGCCGCGGGTGCAGAGTaGGGTGGCTGGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGAAGAE*GGWCPR
Trigger: GCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTGAGAGACCGCTGGCTTaGAAACTGGGCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPERPLA*KLGSVP
Trigger: TGGCACGGAGCCCAGTTTCCAAGCCAGCGGTCTCTC...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTGGGCCGGAGGCAGACTaGTCAGAGGAGTTTTTGCGG +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPGPEAD*SEEFLR
Trigger: CCGCAAAAACTCCTCTGACCAGTCTGCCTCCGGCCC...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGTGGTGCAGGGGCTGGTaGTGGCCGCCAGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWWCRGW*WPPAAG
Trigger: CCCTGCCGCTGGCGGCCACCACCAGCCCCTGCACCA...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGCCGCGGGTGCAGAGTaGGGTGGCTGGTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKAAGAE*GGWCPR
Trigger: GCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTAACCCGGGCGCGCTTTaGTCTCAGGTGCTCATCACA +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPNPGAL*SQVLIT
Trigger: TGTGATGAGCACCTGAGAGCAAAGCGCGCCCGGGTT...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTTGCATGTCCTCCAGCTaGTGTTTCAGCTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPCMSSS*CFSCRR
Trigger: GCGCCGACAGCTGAAACAGCAGCTGGAGGACATGCA...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGGAGGAGCGGAGCGCTaGGTTCCACGGAGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGGGAER*VPRRLP
Trigger: CGGGAGCCTCCGTGGAACTCAGCGCTCCGCTCCTCC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261454.8
ENST00000435016.2
CDS-3UTR GCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTGACAACCAGGGGCAGTaGTTCTGTCTGGTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPDNQGQ*FCLVSG
Trigger: TCCACTGACCAGACAGAAGCACTGCCCCTGGTTGTC...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATAGAGCCCTTCGGCGGTaGTGGGCGGGTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANRALRR*WAGVLV
Trigger: CACCAGCACACCCGCCCAGCACCGCCGAAGGGCTCT...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATATCCCGGGACCGCGGTaGAGGGAGCAGTGGGACCGA +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANIPGPR*REQWDR
Trigger: TCGGTCCCACTGCTCCCTGCACCGCGGTCCCGGGAT...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGATCCCGGGACCGCGGTaGAGGGAGCAGTGGGACCGA +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWIPGPR*REQWDR
Trigger: TCGGTCCCACTGCTCCCTGCACCGCGGTCCCGGGAT...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGAGAGGTGGGAAGACCTaGGGAACCTGGCGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWRGGKT*GTWREG
Trigger: GCCCTCCCGCCAGGTTCCTCAGGTCTTCCCACCTCT...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATAGAGGTGGGAAGACCTaGGGAACCTGGCGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANRGGKT*GTWREG
Trigger: GCCCTCCCGCCAGGTTCCTCAGGTCTTCCCACCTCT...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATGGGCGGGTGTGCTGGTaGACAAGGGTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANGRVCW*TRVVAQ
Trigger: CTGAGCCACCACCCTTGTTCACCAGCACACCCGCCC...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTCAAAAGCTCGTCAGCTaGGCACAGCTCAAGAATCCC +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPQKLVS*AQLKNP
Trigger: GGGATTCTTGAGCTGTGCCCAGCTGACGAGCTTTTG...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTGCTGAAACCAGCTGCTaGAAACTCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPAETSC*KLCCCC
Trigger: GCAGCAGCAACAGAGTTTCCAGCAGCTGGTTTCAGC...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGGCAGAGAGAGGCGACTaGTGCAGGGGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWAERGD*CRGWWW
Trigger: CCACCACCAGCCCCTGCACCAGTCGCCTCTCTCTGC...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATGGAAGGGGGAAGGGGTaGCGGAAGGTGGACGTGGTG +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANGRGKG*RKVDVV
Trigger: CACCACGTCCACCTTCCGCCACCCCTTCCCCCTTCC...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGCCCTTCGGCGGTGCTaGGCGGGTGTGCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVALRRC*AGVLVN
Trigger: GTTCACCAGCACACCCGCCCAGCACCGCCGAAGGGC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGGGTGCAGAGTGAGGTaGCTGGTGCCCCCGCCCGTG +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKGCRVR*LVPPPV
Trigger: CACGGGCGGGGGCACCAGCCACCTCACTCTGCACCC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCAGAGGTGGGAAGACCTaGGGAACCTGGCGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGRGGKT*GTWREG
Trigger: GCCCTCCCGCCAGGTTCCTCAGGTCTTCCCACCTCT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAAGAGCCCTTCGGCGGTaGTGGGCGGGTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKRALRR*WAGVLV
Trigger: CACCAGCACACCCGCCCAGCACCGCCGAAGGGCTCT...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCCCCCGCCCGTGTGGCTaGACCCTCTGTCTACACTGC +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVPRPCG*TLCLHC
Trigger: GCAGTGTAGACAGAGGGTGCAGCCACACGGGCGGGG...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTTGGTGCAGGGGCTGGTaGTGGCCGCCAGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIWCRGW*WPPAAG
Trigger: CCCTGCCGCTGGCGGCCACCACCAGCCCCTGCACCA...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAGACTGGTGCAGGGGCTaGTGGTGGCCGCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTDWCRG*WWPPAA
Trigger: TGCCGCTGGCGGCCACCACCAGCCCCTGCACCAGTC...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGACTGGTGCAGGGGCTaGTGGTGGCCGCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVDWCRG*WWPPAA
Trigger: TGCCGCTGGCGGCCACCACCAGCCCCTGCACCAGTC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGCCCTTCGGCGGTGCTaGGCGGGTGTGCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKALRRC*AGVLVN
Trigger: GTTCACCAGCACACCCGCCCAGCACCGCCGAAGGGC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGTGCCCCCGCCCGTGTaGCTGCACCCTCTGTCTACA +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGVPPPV*LHPLST
Trigger: TGTAGACAGAGGGTGCAGCCACACGGGCGGGGGCAC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTCTGCATATATCCTCCTaGTGTACTTCGGAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPLHISS*CTSEPV
Trigger: TACAGGCTCCGAAGTACATCAGGAGGATATATGCAG...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTTGGCCGAAAAGACTTTaGCCACAGTGTCCACAACTT +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPWPKRL*PQCPQL
Trigger: AAGTTGTGGACACTGTGGTCAAAGTCTTTTCGGCCA...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGGAAGGTGGACGTGGTaGAGCCCGTGGTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGGRWTW*SPWWQR
Trigger: TCTCTGCCACCACGGGCTTCACCACGTCCACCTTCC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGGGCGGGTGTGCTGGTaGACAAGGGTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKGRVCW*TRVVAQ
Trigger: CTGAGCCACCACCCTTGTTCACCAGCACACCCGCCC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTATTTCAGACATATCTTaGAGATCGCCGCACTCGGAC +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPISDIS*RSPHSD
Trigger: GTCCGAGTGCGGCGATCTTCAAGATATGTCTGAAAT...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTTCCCCATCTGCATGCTaGACCACTGAATACTCAACA +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPSPSAC*TTEYST
Trigger: TGTTGAGTATTCAGTGGTGCAGCATGCAGATGGGGA...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTTTTTCAGCCATTTCCTaGTCTCTGATCAGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPFSAIS*SLIRAR
Trigger: TCGAGCCCTGATCAGAGAGCAGGAAATGGCTGAAAA...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTACAGTGTCCACAACTTaGGACATGGCAGTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPTVSTT*DMAVFS
Trigger: ACTGAACACTGCCATGTCGCAAGTTGTGGACACTGT...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGGGACGGTGAGTCTGTaGGACAGCGAGCGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKGTVSL*DSERAS
Trigger: GCTCGCTCGCTCGCTGTCGCACAGACTCACCGTCCC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTAGGAAAACACGCGAGTaGACACACGGTGATATCTTG +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPRKTRE*THGDIL
Trigger: CAAGATATCACCGTGTGTGCACTCGCGTGTTTTCCT...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTATGGTCAGGCATCACTaGACGGTTATTGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPMVRHH*TVIVPS
Trigger: AGATGGCACAATAACCGTCCAGTGATGCCTGACCAT...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATGAGAGACCGCTGGCTTaGAAACTGGGCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANERPLA*KLGSVP
Trigger: TGGCACGGAGCCCAGTTTCCAAGCCAGCGGTCTCTC...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTGCGGTGTGGAAATTGTaGTTTTCCCCATTGACTGCA +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPAVWKL*FSPLTA
Trigger: TGCAGTCAATGGGGAAAACCACAATTTCCACACCGC...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATGGGCCGGAGGCAGACTaGTCAGAGGAGTTTTTGCGG +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANGPEAD*SEEFLR
Trigger: CCGCAAAAACTCCTCTGACCAGTCTGCCTCCGGCCC...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTATGGTGCAGGGGCTGGTaGTGGCCGCCAGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLWCRGW*WPPAAG
Trigger: CCCTGCCGCTGGCGGCCACCACCAGCCCCTGCACCA...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGACTGGTGCAGGGGCTaGTGGTGGCCGCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFDWCRG*WWPPAA
Trigger: TGCCGCTGGCGGCCACCACCAGCCCCTGCACCAGTC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTGACTGGTGCAGGGGCTaGTGGTGGCCGCCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIDWCRG*WWPPAA
Trigger: TGCCGCTGGCGGCCACCACCAGCCCCTGCACCAGTC...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTGGGTGCAGAGTGAGGTaGCTGGTGCCCCCGCCCGTG +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIGCRVR*LVPPPV
Trigger: CACGGGCGGGGGCACCAGCCACCTCACTCTGCACCC...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCCGGTGCAGGGAGCAGTaGGACCGAGCCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVRCREQ*DRASLS
Trigger: AGAGAGAGAGGCTCGGTCCCACTGCTCCCTGCACCG...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAGAGCGCTCCCTCAGCTaGGGGCTCCGCTCCACAACA +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTERSLS*GLRSTT
Trigger: TGTTGTGGAGCGGAGCCCTCAGCTGAGGGAGCGCTC...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498508.6
CDS-3UTR GCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTGAATACTCAACATCCTaGTCAGAACCTTGGGGATTC +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPEYSTS*SEPWGF
Trigger: GAATCCCCAAGGTTCTGAGCAGGATGTTGAGTATTC...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATTCTTTTGCGCCGCTCTaGTTTCCCCGGCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANSFAPL*FPRLQW
Trigger: CCATTGCAGCCGGGGAAAGCAGAGCGGCGCAAAAGA...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGGGACGGTGAGTCTGTaGGACAGCGAGCGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVGTVSL*DSERAS
Trigger: GCTCGCTCGCTCGCTGTCGCACAGACTCACCGTCCC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCCTTCCGACAGAGTCCTaGGCCCTGGCATCCAGGATC +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGLPTES*ALASRI
Trigger: GATCCTGGATGCCAGGGCCCAGGACTCTGTCGGAAG...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGACTGCAAATCTGGCCTaGGGGATCTGGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWTANLA*GIWRGG
Trigger: CCCACCTCTCCAGATCCCCCAGGCCAGATTTGCAGT...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGGAAGGGGGAAGGGGTaGCGGAAGGTGGACGTGGTG +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVGRGKG*RKVDVV
Trigger: CACCACGTCCACCTTCCGCCACCCCTTCCCCCTTCC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAGGAAGGGGGAAGGGGTaGCGGAAGGTGGACGTGGTG +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTGRGKG*RKVDVV
Trigger: CACCACGTCCACCTTCCGCCACCCCTTCCCCCTTCC...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
3UTR CAA 72 bp GCAGTAGAAACAAGAGACACATCACTGTCTGTAGAGTaGTGCTGTGTCATGGGTTTTCCTCAGCCAACCGCC +
Preference number: 4 (lower is better)
Translates to: AVETRDTSLSVE*CCVMGFPQPTA
Trigger: GGCGGTTGGCTGAGGAAAACCCATGACACAGCACAACTCTACAGACAGTGATGTGTCTCTTGTTTCTACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCCCATTTCCTGCTCTCTaGTCAGGGCTCGAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGPFPAL*SGLELG
Trigger: ACCGAGCTCGAGCCCTGATCAGAGAGCAGGAAATGG...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTAGAGGTGGGAAGACCTaGGGAACCTGGCGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIRGGKT*GTWREG
Trigger: GCCCTCCCGCCAGGTTCCTCAGGTCTTCCCACCTCT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAGGAAGGTGGACGTGGTaGAGCCCGTGGTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTGRWTW*SPWWQR
Trigger: TCTCTGCCACCACGGGCTTCACCACGTCCACCTTCC...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATTGGTGGCTCAGGTGGTaGGATGACATCTTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANWWLRW*DDILVL
Trigger: GAGGACCAAGATGTCATCTCACCACCTGAGCCACCA...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGGGCGGGTGTGCTGGTaGACAAGGGTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFGRVCW*TRVVAQ
Trigger: CTGAGCCACCACCCTTGTTCACCAGCACACCCGCCC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCGCACTCGGACTTTATaGGCGACAAGGAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANRTRTL*ATRRAL
Trigger: AAGGGCTCTCCTTGTCGCTCATAAAGTCCGAGTGCG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATTGGACAAGGGACGGTaGGTCTGTGCGACAGCGAGC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKLDKGR*VCATAS
Trigger: GCTCGCTGTCGCACAGACTCACCGTCCCTTGTCCAA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCGGGCTGAAACCAGCTaGTGGAAACTCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANRAETS*WKLCCC
Trigger: GCAGCAACAGAGTTTCCAGCAGCTGGTTTCAGCCCG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATTGGCCATCTGCACATTaGCAAAGGTGTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANWPSAH*QRCPGG
Trigger: ACCCCCTGGACACCTTTGGCAATGTGCAGATGGCCA...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATGGTCAGAGGAGTTTTTaGGGACAACCAGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANGQRSF*GQPGAV
Trigger: CACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACC...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTTCTTCACATATACACTaGTTCTTTCAGGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPSSHIH*FFQGSL
Trigger: CAGACTCCCCTGAAAGAAGCAGTGTATATGTGAAGA...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGGACCTCTTAGGAACTaGGAGGAGCGGAGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKGPLRN*EERSAE
Trigger: CTCAGCGCTCCGCTCCTCCCAGTTCCTAAGAGGTCC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261454.8
ENST00000435016.2
CDS-3UTR CCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCAGGGCTGTGCTGTCATaGTCAGGCATCACTGGACGG +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVRAVLS*SGITGR
Trigger: CCGTCCAGTGATGCCTGACCATGACAGCACAGCCCT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGCGCTGGCTTGGAAACTaGGCTCCGTGCCACCATTTT +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWRWLGN*APCHHF
Trigger: AAAATGGTGGCACGGAGCCCAGTTTCCAAGCCAGCG...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACTTCCGACAGAGTCCTaGGCCCTGGCATCCAGGATC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKLPTES*ALASRI
Trigger: GATCCTGGATGCCAGGGCCCAGGACTCTGTCGGAAG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCACTGCAAATCTGGCCTaGGGGATCTGGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVTANLA*GIWRGG
Trigger: CCCACCTCTCCAGATCCCCCAGGCCAGATTTGCAGT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGACTGCAGGCGCTGGTTaGCGGTGTGGAAATTGTGGT +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWTAGAG*RCGNCG
Trigger: ACCACAATTTCCACACCGCCAACCAGCGCCTGCAGT...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGCAGAGAGAGGCGACTaGTGCAGGGGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFAERGD*CRGWWW
Trigger: CCACCACCAGCCCCTGCACCAGTCGCCTCTCTCTGC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGCAGAGAGAGGCGACTaGTGCAGGGGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRAERGD*CRGWWW
Trigger: CCACCACCAGCCCCTGCACCAGTCGCCTCTCTCTGC...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGGAAGGGGGAAGGGGTaGCGGAAGGTGGACGTGGTG +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFGRGKG*RKVDVV
Trigger: CACCACGTCCACCTTCCGCCACCCCTTCCCCCTTCC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGCCCTTCGGCGGTGCTaGGCGGGTGTGCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFALRRC*AGVLVN
Trigger: GTTCACCAGCACACCCGCCCAGCACCGCCGAAGGGC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGGCCCTGTTAGTCCCCTaGATGGTGCAGGGCATCATA +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWALLVP*MVQGII
Trigger: TATGATGCCCTGCACCATCCAGGGGACTAACAGGGC...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGTGCCCCCGCCCGTGTaGCTGCACCCTCTGTCTACA +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFVPPPV*LHPLST
Trigger: TGTAGACAGAGGGTGCAGCCACACGGGCGGGGGCAC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGGAAGGTGGACGTGGTaGAGCCCGTGGTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRGRWTW*SPWWQR
Trigger: TCTCTGCCACCACGGGCTTCACCACGTCCACCTTCC...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCTGGTGGCTCAGGTGGTaGGATGACATCTTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVWWLRW*DDILVL
Trigger: GAGGACCAAGATGTCATCTCACCACCTGAGCCACCA...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGGGCGGGTGTGCTGGTaGACAAGGGTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFGRVCW*TRVVAQ
Trigger: CTGAGCCACCACCCTTGTTCACCAGCACACCCGCCC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCAACCCAGTGGCACACTaGCACGAACAAGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVNPVAH*HEQGLP
Trigger: TGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTACATCCCTAGTACAGTaGCAAAGATTCTGCAAACAT +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPTSLVQ*QRFCKH
Trigger: ATGTTTGCAGAATCTTTGTCACTGTACTAGGGATGT...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTATTGGACAAGGGACGGTaGGTCTGTGCGACAGCGAGC +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVLDKGR*VCATAS
Trigger: GCTCGCTGTCGCACAGACTCACCGTCCCTTGTCCAA...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGGGCTTAAGAGGGCTGTaGTGTCATGGTCAGGCATCA +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWGLRGL*CHGQAS
Trigger: TGATGCCTGACCATGACAGCACAGCCCTCTTAAGCC...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATGCATGTCCTCCAGCTaGTGTTTCAGCTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKCMSSS*CFSCRR
Trigger: GCGCCGACAGCTGAAACAGCAGCTGGAGGACATGCA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAACGTCGCCAAAGCACTaGAGGCGCTGGTTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRTSPKH*RRWLAV
Trigger: CACCGCCAACCAGCGCCTGCAGTGCTTTGGCGACGT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCTGGCCATCTGCACATTaGCAAAGGTGTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVWPSAH*QRCPGG
Trigger: ACCCCCTGGACACCTTTGGCAATGTGCAGATGGCCA...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCTGGCCATCTGCACATTaGCAAAGGTGTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGWPSAH*QRCPGG
Trigger: ACCCCCTGGACACCTTTGGCAATGTGCAGATGGCCA...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACCCCGCCCGTGTGGCTaGACCCTCTGTCTACACTGC +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLPRPCG*TLCLHC
Trigger: GCAGTGTAGACAGAGGGTGCAGCCACACGGGCGGGG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCCGGCGAGAGCTCTTTTaGGCCGCTCTGCTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFRRELF*AALLSP
Trigger: CGGGGAAAGCAGAGCGGCGCAAAAGAGCTCTCGCCG...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGCAAAAGCTCGTCAGCTaGGCACAGCTCAAGAATCCC +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWQKLVS*AQLKNP
Trigger: GGGATTCTTGAGCTGTGCCCAGCTGACGAGCTTTTG...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAAGGGCTGTGCTGTCATaGTCAGGCATCACTGGACGG +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKRAVLS*SGITGR
Trigger: CCGTCCAGTGATGCCTGACCATGACAGCACAGCCCT...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAGAGAGACCGCTGGCTTaGAAACTGGGCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTERPLA*KLGSVP
Trigger: TGGCACGGAGCCCAGTTTCCAAGCCAGCGGTCTCTC...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTACTTCCGACAGAGTCCTaGGCCCTGGCATCCAGGATC +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVLPTES*ALASRI
Trigger: GATCCTGGATGCCAGGGCCCAGGACTCTGTCGGAAG...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCACTGCAGGCGCTGGTTaGCGGTGTGGAAATTGTGGT +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVTAGAG*RCGNCG
Trigger: ACCACAATTTCCACACCGCCAACCAGCGCCTGCAGT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCAAGCACTGCAGGCGCTaGTTGGCGGTGTGGAAATTG +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGKHCRR*LAVWKL
Trigger: CAATTTCCACACCGCCAACCAGCGCCTGCAGTGCTT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGGCAGTGCTTCTGTCTaGTCAGTGGAACTGGCCATC +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGGSASV*SVELAI
Trigger: GATGGCCAGTTCCACTGACCAGACAGAAGCACTGCC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGGCAGTGCTTCTGTCTaGTCAGTGGAACTGGCCATC +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVGSASV*SVELAI
Trigger: GATGGCCAGTTCCACTGACCAGACAGAAGCACTGCC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGCAGAGAGAGGCGACTaGTGCAGGGGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFAERGD*CRGWWW
Trigger: CCACCACCAGCCCCTGCACCAGTCGCCTCTCTCTGC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGCCCTGTTAGTCCCCTaGATGGTGCAGGGCATCATA +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGALLVP*MVQGII
Trigger: TATGATGCCCTGCACCATCCAGGGGACTAACAGGGC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAGTGCCCCCGCCCGTGTaGCTGCACCCTCTGTCTACA +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLVPPPV*LHPLST
Trigger: TGTAGACAGAGGGTGCAGCCACACGGGCGGGGGCAC...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCTGTGGTTTTCCCCATTaGCTGCAAATCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVCGFPH*LQIWPG
Trigger: CCCAGGCCAGATTTGCAGTCAATGGGGAAAACCACA...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAGGAAGGTGGACGTGGTaGAGCCCGTGGTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLGRWTW*SPWWQR
Trigger: TCTCTGCCACCACGGGCTTCACCACGTCCACCTTCC...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCCGAGTGCACACACGGTaGTATCTTGCGGGTGATGAA +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGRVHTR*YLAGDE
Trigger: TTCATCACCCGCAAGATATCACCGTGTGTGCACTCG...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCCTTCTCCTCTTGGTTTaGCGGCTTAAGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGLLLLV*RLKRAV
Trigger: CACAGCCCTCTTAAGCCGGCAAACCAAGAGGAGAAG...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTATGCATGTCCTCCAGCTaGTGTTTCAGCTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVCMSSS*CFSCRR
Trigger: GCGCCGACAGCTGAAACAGCAGCTGGAGGACATGCA...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGGATCTCCGAGCGCATaGTGTCTTCAGACAGGTTAC +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVGSPSA*CLQTGY
Trigger: GTAACCTGTCTGAAGACAGCATGCGCTCGGAGATCC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTACGTCGCCAAAGCACTaGAGGCGCTGGTTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFTSPKH*RRWLAV
Trigger: CACCGCCAACCAGCGCCTGCAGTGCTTTGGCGACGT...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAACGTCGCCAAAGCACTaGAGGCGCTGGTTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLTSPKH*RRWLAV
Trigger: CACCGCCAACCAGCGCCTGCAGTGCTTTGGCGACGT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTTTTGGAAAAGTGAGCTaGTCATCTGTCATTGGAATT +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPFGKVS*SSVIGI
Trigger: AATTCCAATGACAGATGAGCAGCTCACTTTTCCAAA...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAACCCTCTGTCTACACTaGGAGGCCCTGTTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVTLCLH*EALLVP
Trigger: GGGGACTAACAGGGCCTCGCAGTGTAGACAGAGGGT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTAATACACTACAGCTTTaGCTTTTACCTTGCAAATGG +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPNTLQL*LLPCKW
Trigger: CCATTTGCAAGGTAAAAGGCAAAGCTGTAGTGTATT...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTCGGCGAGAGCTCTTTTaGGCCGCTCTGCTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFRRELF*AALLSP
Trigger: CGGGGAAAGCAGAGCGGCGCAAAAGAGCTCTCGCCG...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGGACCTCTTAGGAACTaGGAGGAGCGGAGCGCTGAG +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRGPLRN*EERSAE
Trigger: CTCAGCGCTCCGCTCCTCCCAGTTCCTAAGAGGTCC...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261454.8
ENST00000435016.2
CDS-3UTR CCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAAGGGCTGTGCTGTCATaGTCAGGCATCACTGGACGG +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVRAVLS*SGITGR
Trigger: CCGTCCAGTGATGCCTGACCATGACAGCACAGCCCT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATAACTTTTCCTGCAGCTaGCGCAGCTGTTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANNFSCS*RSCFCM
Trigger: CATGCAGAAACAGCTGCGCCAGCTGCAGGAAAAGTT...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTCTTCCGACAGAGTCCTaGGCCCTGGCATCCAGGATC +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEILPTES*ALASRI
Trigger: GATCCTGGATGCCAGGGCCCAGGACTCTGTCGGAAG...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAACTGCAAATCTGGCCTaGGGGATCTGGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTTANLA*GIWRGG
Trigger: CCCACCTCTCCAGATCCCCCAGGCCAGATTTGCAGT...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCCGCTGGTTGGCGGTGTaGAAATTGTGGTTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGRWLAV*KLWFSP
Trigger: TGGGGAAAACCACAATTTCCACACCGCCAACCAGCG...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAACTGCAGGCGCTGGTTaGCGGTGTGGAAATTGTGGT +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKTAGAG*RCGNCG
Trigger: ACCACAATTTCCACACCGCCAACCAGCGCCTGCAGT...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGTCTGGTCAGTGGAACTaGCCATCTGCACATTGCCAA +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWSGQWN*PSAHCQ
Trigger: TTGGCAATGTGCAGATGGCCAGTTCCACTGACCAGA...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGCTTCTGTCTGGTCAGTaGAACTGGCCATCTGCACAT +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWLLSGQ*NWPSAH
Trigger: ATGTGCAGATGGCCAGTTCCACTGACCAGACAGAAG...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTGGGCCGGAGGCAGACTaGTCAGAGGAGTTTTTGCGG +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIGPEAD*SEEFLR
Trigger: CCGCAAAAACTCCTCTGACCAGTCTGCCTCCGGCCC...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTACTGTGACTACAAGTTaGGATTACTTCCCTATTTTG +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPTVTTS*DYFPIL
Trigger: CAAAATAGGGAAGTAATCCCAACTTGTAGTCACAGT...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCTGCATGCTGCACCACTaGATACTCAACATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGCMLHH*ILNILL
Trigger: GAGCAGGATGTTGAGTATTCAGTGGTGCAGCATGCA...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCTGCATATATCCTCCTaGTGTACTTCGGAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANLHISS*CTSEPV
Trigger: TACAGGCTCCGAAGTACATCAGGAGGATATATGCAG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACCATTTCCTGCTCTCTaGTCAGGGCTCGAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRPFPAL*SGLELG
Trigger: ACCGAGCTCGAGCCCTGATCAGAGAGCAGGAAATGG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACCATCGTTGATGGCTTaGCGTGCGTACTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKPSLMA*RAYFSI
Trigger: GATGGAGAAGTACGCACGTCAAGCCATCAACGATGG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACTTCTCCTCTTGGTTTaGCGGCTTAAGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKLLLLV*RLKRAV
Trigger: CACAGCCCTCTTAAGCCGGCAAACCAAGAGGAGAAG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAAACCCGGGCGCGCTTTaGTCTCAGGTGCTCATCACA +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRNPGAL*SQVLIT
Trigger: TGTGATGAGCACCTGAGAGCAAAGCGCGCCCGGGTT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCTGGAAACTCTGTTGCTaGTGCTGGGGAAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGWKLCC*CWGSFC
Trigger: GCAAAAGCTTCCCCAGCAGCAGCAACAGAGTTTCCA...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCTGGAAACTCTGTTGCTaGTGCTGGGGAAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVWKLCC*CWGSFC
Trigger: GCAAAAGCTTCCCCAGCAGCAGCAACAGAGTTTCCA...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACACGGGCTGAAACCAGCTaGTGGAAACTCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTRAETS*WKLCCC
Trigger: GCAGCAACAGAGTTTCCAGCAGCTGGTTTCAGCCCG...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTACGGGCTGAAACCAGCTaGTGGAAACTCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVRAETS*WKLCCC
Trigger: GCAGCAACAGAGTTTCCAGCAGCTGGTTTCAGCCCG...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGGATCTCCGAGCGCATaGTGTCTTCAGACAGGTTAC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKGSPSA*CLQTGY
Trigger: GTAACCTGTCTGAAGACAGCATGCGCTCGGAGATCC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGTGGAACTGGCCATCTaGACATTGCCAAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKVELAI*TLPKVS
Trigger: GGACACCTTTGGCAATGTGCAGATGGCCAGTTCCAC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAGACAACCAGGGGCAGTaGTTCTGTCTGGTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTDNQGQ*FCLVSG
Trigger: TCCACTGACCAGACAGAAGCACTGCCCCTGGTTGTC...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGACAACCAGGGGCAGTaGTTCTGTCTGGTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVDNQGQ*FCLVSG
Trigger: TCCACTGACCAGACAGAAGCACTGCCCCTGGTTGTC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGGTCAGAGGAGTTTTTaGGGACAACCAGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVGQRSF*GQPGAV
Trigger: CACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTACCCTCTGTCTACACTaGGAGGCCCTGTTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEITLCLH*EALLVP
Trigger: GGGGACTAACAGGGCCTCGCAGTGTAGACAGAGGGT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAACCCTCTGTCTACACTaGGAGGCCCTGTTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRTLCLH*EALLVP
Trigger: GGGGACTAACAGGGCCTCGCAGTGTAGACAGAGGGT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTTCTTTTGCGCCGCTCTaGTTTCCCCGGCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEISFAPL*FPRLQW
Trigger: CCATTGCAGCCGGGGAAAGCAGAGCGGCGCAAAAGA...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACAAAAGCTCGTCAGCTaGGCACAGCTCAAGAATCCC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKQKLVS*AQLKNP
Trigger: GGGATTCTTGAGCTGTGCCCAGCTGACGAGCTTTTG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCAGGGCTGTGCTGTCATaGTCAGGCATCACTGGACGG +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFRAVLS*SGITGR
Trigger: CCGTCCAGTGATGCCTGACCATGACAGCACAGCCCT...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCCAACTCTTCTCCTCTTaGTTTGCCGGCTTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVQLFSS*FAGLRG
Trigger: CCCTCTTAAGCCGGCAAACCAAGAGGAGAAGAGTTG...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGAGAGACCGCTGGCTTaGAAACTGGGCTCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFERPLA*KLGSVP
Trigger: TGGCACGGAGCCCAGTTTCCAAGCCAGCGGTCTCTC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCGATCCATATCAAACTaGCTCATAGTAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANRSISN*LIVGLP
Trigger: TGGCAGGCCTACTATGAGCCAGTTTGATATGGATCG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGCGATCCATATCAAACTaGCTCATAGTAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWRSISN*LIVGLP
Trigger: TGGCAGGCCTACTATGAGCCAGTTTGATATGGATCG...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAAAGCACTGCAGGCGCTaGTTGGCGGTGTGGAAATTG +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVKHCRR*LAVWKL
Trigger: CAATTTCCACACCGCCAACCAGCGCCTGCAGTGCTT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGGGCCGGAGGCAGACTaGTCAGAGGAGTTTTTGCGG +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFGPEAD*SEEFLR
Trigger: CCGCAAAAACTCCTCTGACCAGTCTGCCTCCGGCCC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCAGTTGTGCTGTGTCATaGGTTTTCCTCAGCCAACCG +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVSCAVS*VFLSQP
Trigger: CGGTTGGCTGAGGAAAACCCATGACACAGCACAACT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCAGTTGTGCTGTGTCATaGGTTTTCCTCAGCCAACCG +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGSCAVS*VFLSQP
Trigger: CGGTTGGCTGAGGAAAACCCATGACACAGCACAACT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTCTTTTACCTTGCAAATaGCAACACAAAGTTGATATG +
Preference number: 4 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPLLPCK*QHKVDM
Trigger: CATATCAACTTTGTGTTGCCATTTGCAAGGTAAAAG...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCCTGCATATATCCTCCTaGTGTACTTCGGAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVLHISS*CTSEPV
Trigger: TACAGGCTCCGAAGTACATCAGGAGGATATATGCAG...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGCACATCTCATTATCTaGCCTTCCGACAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKAHLII*PSDRVL
Trigger: CAGGACTCTGTCGGAAGGTCAGATAATGAGATGTGC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACCATTTCCTGCTCTCTaGTCAGGGCTCGAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLPFPAL*SGLELG
Trigger: ACCGAGCTCGAGCCCTGATCAGAGAGCAGGAAATGG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTCGCACTCGGACTTTATaGGCGACAAGGAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIRTRTL*ATRRAL
Trigger: AAGGGCTCTCCTTGTCGCTCATAAAGTCCGAGTGCG...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCATTTCAGACATATCTTaGAGATCGCCGCACTCGGAC +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGISDIS*RSPHSD
Trigger: GTCCGAGTGCGGCGATCTTCAAGATATGTCTGAAAT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGTTTCAAGTGATTGGGTaGCAATCCTTCCTGCATTGC +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWFQVIG*QSFLHC
Trigger: GCAATGCAGGAAGGATTGTCACCCAATCACTTGAAA...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACACCATCGTTGATGGCTTaGCGTGCGTACTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTPSLMA*RAYFSI
Trigger: GATGGAGAAGTACGCACGTCAAGCCATCAACGATGG...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTACCATCGTTGATGGCTTaGCGTGCGTACTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVPSLMA*RAYFSI
Trigger: GATGGAGAAGTACGCACGTCAAGCCATCAACGATGG...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCTCCCGTAATGTGATCTaGGCAACTTCCAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGSRNVI*ATSRNL
Trigger: GAGATTCCTGGAAGTTGCTCAGATCACATTACGGGA...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGGCAGTTCGGGGATTTaGAAATCTCAGGGACTTCAC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKGSSGI*KSQGLH
Trigger: GTGAAGTCCCTGAGATTTTCAAATCCCCGAACTGCC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGGTTCCTCTTAGGAGATaGCGATCAAGTCAGCTAATG +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWVPLRR*RSSQLM
Trigger: CATTAGCTGACTTGATCGTCATCTCCTAAGAGGAAC...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATGCATTAGTAGAGTGTaGGCTGGGAGATGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKCISRV*AGRCVR
Trigger: CCTCACACATCTCCCAGCTCACACTCTACTAATGCA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCAACCCAGTGGCACACTaGCACGAACAAGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFNPVAH*HEQGLP
Trigger: TGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTT...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGGAGAGAAGGCTCAGTTaGAAAGACTCAAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWERRLS*KDSKSR
Trigger: TCTGGACTTTGAGTCTTTTCAACTGAGCCTTCTCTC...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCAGGGGGTGTCAGATTTaGGAGAAGGCTCAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGRGCQI*EKAQLK
Trigger: TTTCAACTGAGCCTTCTCTCAAATCTGACACCCCCT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTACTTCTCCTCTTGGTTTaGCGGCTTAAGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVLLLLV*RLKRAV
Trigger: CACAGCCCTCTTAAGCCGGCAAACCAAGAGGAGAAG...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATGAATACTCAACATCCTaGTCAGAACCTTGGGGATTC +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANEYSTS*SEPWGF
Trigger: GAATCCCCAAGGTTCTGAGCAGGATGTTGAGTATTC...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGTTTTCCCCATCTGCATaGTGCACCACTGAATACTCA +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWFSPSA*CTTEYS
Trigger: TGAGTATTCAGTGGTGCAGCATGCAGATGGGGAAAA...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGGAAACTGGGCTCCGTaGCACCATTTTTGTTCATGT +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGGNWAP*HHFCSC
Trigger: ACATGAACAAAAATGGTGGCACGGAGCCCAGTTTCC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACGCTTTGCTCTCAGGTaGTCATCACATAAGCGATCC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKRFALR*SSHKRS
Trigger: GGATCGCTTATGTGATGAGCACCTGAGAGCAAAGCG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTAACCCGGGCGCGCTTTaGTCTCAGGTGCTCATCACA +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFNPGAL*SQVLIT
Trigger: TGTGATGAGCACCTGAGAGCAAAGCGCGCCCGGGTT...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCAAACTCTGTTGCTGCTaGTGGGGAAGCTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGKLCCC*WGSFCL
Trigger: CAAGCAAAAGCTTCCCCAGCAGCAGCAACAGAGTTT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCTTTTCAGCCATTTCCTaGTCTCTGATCAGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGFSAIS*SLIRAR
Trigger: TCGAGCCCTGATCAGAGAGCAGGAAATGGCTGAAAA...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCACAGTGTCCACAACTTaGGACATGGCAGTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGTVSTT*DMAVFS
Trigger: ACTGAACACTGCCATGTCGCAAGTTGTGGACACTGT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTGGCCATCTGCACATTaGCAAAGGTGTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFWPSAH*QRCPGG
Trigger: ACCCCCTGGACACCTTTGGCAATGTGCAGATGGCCA...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTGACAACCAGGGGCAGTaGTTCTGTCTGGTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIDNQGQ*FCLVSG
Trigger: TCCACTGACCAGACAGAAGCACTGCCCCTGGTTGTC...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTGGTCAGAGGAGTTTTTaGGGACAACCAGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIGQRSF*GQPGAV
Trigger: CACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACC...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATTCTGCTTTCCCCGGCTaGAATGGTGTATTATTTCAG +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANSAFPG*NGVLFQ
Trigger: CTGAAATAATACACCATTGCAGCCGGGGAAAGCAGA...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGTCTGCTTTCCCCGGCTaGAATGGTGTATTATTTCAG +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWSAFPG*NGVLFQ
Trigger: CTGAAATAATACACCATTGCAGCCGGGGAAAGCAGA...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGTCCTGCTCAGAACCTTaGGGATTCATGGCACTAAAA +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWSCSEP*GFMALK
Trigger: TTTTAGTGCCATGAATCCCCAAGGTTCTGAGCAGGA...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCTGGAAAAGGCATCATaGCATCTTCATACGAGTTCG +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANLEKAS*HLHTSS
Trigger: CGAACTCGTATGAAGATGCCATGATGCCTTTTCCAG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACGCTGGCTTGGAAACTaGGCTCCGTGCCACCATTTT +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRRWLGN*APCHHF
Trigger: AAAATGGTGGCACGGAGCCCAGTTTCCAAGCCAGCG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTCGCTGGCTTGGAAACTaGGCTCCGTGCCACCATTTT +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIRWLGN*APCHHF
Trigger: AAAATGGTGGCACGGAGCCCAGTTTCCAAGCCAGCG...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAGCTGAAACCAGCTGCTaGAAACTCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTAETSC*KLCCCC
Trigger: GCAGCAGCAACAGAGTTTCCAGCAGCTGGTTTCAGC...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGCGGTGTGGAAATTGTaGTTTTCCCCATTGACTGCA +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVAVWKL*FSPLTA
Trigger: TGCAGTCAATGGGGAAAACCACAATTTCCACACCGC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACACGCTGGTTGGCGGTGTaGAAATTGTGGTTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTRWLAV*KLWFSP
Trigger: TGGGGAAAACCACAATTTCCACACCGCCAACCAGCG...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCAAGCACTGCAGGCGCTaGTTGGCGGTGTGGAAATTG +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFKHCRR*LAVWKL
Trigger: CAATTTCCACACCGCCAACCAGCGCCTGCAGTGCTT...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTAAGCACTGCAGGCGCTaGTTGGCGGTGTGGAAATTG +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIKHCRR*LAVWKL
Trigger: CAATTTCCACACCGCCAACCAGCGCCTGCAGTGCTT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATCTGGTCAGTGGAACTaGCCATCTGCACATTGCCAA +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKSGQWN*PSAHCQ
Trigger: TTGGCAATGTGCAGATGGCCAGTTCCACTGACCAGA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTGGCAGTGCTTCTGTCTaGTCAGTGGAACTGGCCATC +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIGSASV*SVELAI
Trigger: GATGGCCAGTTCCACTGACCAGACAGAAGCACTGCC...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGGTGAGATGACATCTTaGTCCTCAGACTCGTGGTAT +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGGEMTS*SSDSWY
Trigger: ATACCACGAGTCTGAGGACCAAGATGTCATCTCACC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGAGGTCTTCAGCATATTaGAGCTGGGATAACGGGTAT +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWRSSAY*SWDNGY
Trigger: ATACCCGTTATCCCAGCTCCAATATGCTGAAGACCT...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGGCCTCCAGAAGAAACTaGTACGACTTTCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWASRRN*YDFQSL
Trigger: CAAACTCTGAAAGTCGTACCAGTTTCTTCTGGAGGC...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR CAA 72 bp CTGCTTATGTTTGTGCATTCTGAGGGGGTGTCAGATTaGAGAGAAGGCTCAGTTGAAAAGACTCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LLMFVHSEGVSD*REGSVEKTQSP
Trigger: TGGACTTTGAGTCTTTTCAACTGAGCCTTCTCTCAAATCTGACACCCCCTCAGAATGCACAAACATAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCATGTTTACACGGGTCTaGGTAATGGGAGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGMFTRV*VMGGSF
Trigger: AAAAGAGCCTCCCATTACTCAGACCCGTGTAAACAT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261454.8
ENST00000435016.2
CDS-3UTR TCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATGCATGCTGCACCACTaGATACTCAACATCCTGCTC +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTCMLHH*ILNILL
Trigger: GAGCAGGATGTTGAGTATTCAGTGGTGCAGCATGCA...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATGGCCGAAAAGACTTTaGCCACAGTGTCCACAACTT +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKWPKRL*PQCPQL
Trigger: AAGTTGTGGACACTGTGGTCAAAGTCTTTTCGGCCA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTTGTGGTTTTCCCCATTaGCTGCAAATCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEICGFPH*LQIWPG
Trigger: CCCAGGCCAGATTTGCAGTCAATGGGGAAAACCACA...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTTGGTGGCTCAGGTGGTaGGATGACATCTTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFWWLRW*DDILVL
Trigger: GAGGACCAAGATGTCATCTCACCACCTGAGCCACCA...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACGCACTCGGACTTTATaGGCGACAAGGAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLRTRTL*ATRRAL
Trigger: AAGGGCTCTCCTTGTCGCTCATAAAGTCCGAGTGCG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCTTTCAAGTGATTGGGTaGCAATCCTTCCTGCATTGC +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVFQVIG*QSFLHC
Trigger: GCAATGCAGGAAGGATTGTCACCCAATCACTTGAAA...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCAAAACTCCCGTAATGTaGTCTGAGCAACTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGKTPVM*SEQLPG
Trigger: TCCTGGAAGTTGCTCAGATCACATTACGGGAGTTTT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGGCAGTTCGGGGATTTaGAAATCTCAGGGACTTCAC +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVGSSGI*KSQGLH
Trigger: GTGAAGTCCCTGAGATTTTCAAATCCCCGAACTGCC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGGTACTTTGGAAAAGTaGGCTGCTCATCTGTCATTG +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVGTLEK*AAHLSL
Trigger: CAATGACAGATGAGCAGCTCACTTTTCCAAAGTACC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTATGCATTAGTAGAGTGTaGGCTGGGAGATGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVCISRV*AGRCVR
Trigger: CCTCACACATCTCCCAGCTCACACTCTACTAATGCA...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCCAGTCAGAAAACTGTaGCTACAAGTTGGGATTACT +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANPVRKL*LQVGIT
Trigger: AGTAATCCCAACTTGTAGTCACAGTTTTCTGACTGG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAAACCCAGTGGCACACTaGCACGAACAAGGACTGCCA +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLNPVAH*HEQGLP
Trigger: TGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCTTTTCCCCATCTGCATaGTGCACCACTGAATACTCA +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVFSPSA*CTTEYS
Trigger: TGAGTATTCAGTGGTGCAGCATGCAGATGGGGAAAA...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCTGGGAAATTATGGTTaGTCCTGGAAAAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANLGNYG*SWKRHH
Trigger: ATGATGCCTTTTCCAGGAGCAACCATAATTTCCCAG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTCGGGCTGAAACCAGCTaGTGGAAACTCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFRAETS*WKLCCC
Trigger: GCAGCAACAGAGTTTCCAGCAGCTGGTTTCAGCCCG...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTGGATCTCCGAGCGCATaGTGTCTTCAGACAGGTTAC +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIGSPSA*CLQTGY
Trigger: GTAACCTGTCTGAAGACAGCATGCGCTCGGAGATCC...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGGATCTCCGAGCGCATaGTGTCTTCAGACAGGTTAC +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRGSPSA*CLQTGY
Trigger: GTAACCTGTCTGAAGACAGCATGCGCTCGGAGATCC...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTGGAACTGGCCATCTaGACATTGCCAAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRVELAI*TLPKVS
Trigger: GGACACCTTTGGCAATGTGCAGATGGCCAGTTCCAC...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGTTGATGGCTTGACGTaGGTACTTCTCCATCTGAAT +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVVDGLT*VLLHLN
Trigger: ATTCAGATGGAGAAGTACGCACGTCAAGCCATCAAC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGTTGATGGCTTGACGTaGGTACTTCTCCATCTGAAT +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGVDGLT*VLLHLN
Trigger: ATTCAGATGGAGAAGTACGCACGTCAAGCCATCAAC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCAGCCAACCGCCATTTaGAATAAGTCATCAATCAAG +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANQPTAI*NKSSIK
Trigger: CTTGATTGATGACTTATTGCAAATGGCGGTTGGCTG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGAGAGAGCTGGTTTTGTaGAAAATTGCTTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWRELVL*KIALPP
Trigger: TGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCT...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCAGACTGTCACCACTTTaGATACCCATCAGGATAGTG +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVRLSPL*IPIRIV
Trigger: CACTATCCTGATGGGTATGCAAAGTGGTGACAGTCT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCTTCTGCTTATGTTTGTaGATTCTGAGGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVFCLCL*ILRGCQ
Trigger: CTGACACCCCCTCAGAATGCACAAACATAAGCAGAA...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAAGGAAAACACGCGAGTaGACACACGGTGATATCTTG +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKRKTRE*THGDIL
Trigger: CAAGATATCACCGTGTGTGCACTCGCGTGTTTTCCT...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTCTCTGTTGCTGCTGCTaGGGAAGCTTTTGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEILCCCC*GSFCLR
Trigger: ACGCAAGCAAAAGCTTCCCCAGCAGCAGCAACAGAG...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGCTGAAACCAGCTGCTaGAAACTCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFAETSC*KLCCCC
Trigger: GCAGCAGCAACAGAGTTTCCAGCAGCTGGTTTCAGC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGAAGGAGTTTGGCCCATaGTCTCTTTCTTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWKEFGP*SLSLLL
Trigger: CAACAACAAAGAAAGAGACCATGGGCCAAACTCCTT...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAACTGCAGGCGCTGGTTaGCGGTGTGGAAATTGTGGT +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLTAGAG*RCGNCG
Trigger: ACCACAATTTCCACACCGCCAACCAGCGCCTGCAGT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGGCAGTGCTTCTGTCTaGTCAGTGGAACTGGCCATC +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFGSASV*SVELAI
Trigger: GATGGCCAGTTCCACTGACCAGACAGAAGCACTGCC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAAGTTGTGCTGTGTCATaGGTTTTCCTCAGCCAACCG +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTSCAVS*VFLSQP
Trigger: CGGTTGGCTGAGGAAAACCCATGACACAGCACAACT...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGCCTCCAGAAGAAACTaGTACGACTTTCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGASRRN*YDFQSL
Trigger: CAAACTCTGAAAGTCGTACCAGTTTCTTCTGGAGGC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCATATGAGAAATGGCTaGGACAATATTGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANHMRNG*DNIEGS
Trigger: GCTTCCCTCAATATTGTCCCAGCCATTTCTCATATG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCAGTTTAAGAGGAGATaGAAGGCACACAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANQFKRR*KAHKAI
Trigger: AATTGCCTTGTGTGCCTTCCATCTCCTCTTAAACTG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATTTCCCCGGCTGCAATaGTGTATTATTTCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKFPRLQ*CIISER
Trigger: GCGCTCTGAAATAATACACCATTGCAGCCGGGGAAA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
3UTR CAA 72 bp CTCATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTaGCCTCCAGAAGAAACTGGTACGACTTTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LILRELVLCKIA*PPEETGTTFRV
Trigger: AACTCTGAAAGTCGTACCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTACTTGCGGAGTACATTTaGCTTTTCCCCATCTGCATG +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVLAEYI*LFPICM
Trigger: CATGCAGATGGGGAAAAGTCAAATGTACTCCGCAAG...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACTGTTCTTTTCGGGCTaGAACCAGCTGCTGGAAACT +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRLFFSG*NQLLET
Trigger: AGTTTCCAGCAGCTGGTTTCAGCCCGAAAAGAACAG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGCACATCTCATTATCTaGCCTTCCGACAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRAHLII*PSDRVL
Trigger: CAGGACTCTGTCGGAAGGTCAGATAATGAGATGTGC...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTATGGCCGAAAAGACTTTaGCCACAGTGTCCACAACTT +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVWPKRL*PQCPQL
Trigger: AAGTTGTGGACACTGTGGTCAAAGTCTTTTCGGCCA...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTATGTGGTTTTCCCCATTaGCTGCAAATCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLCGFPH*LQIWPG
Trigger: CCCAGGCCAGATTTGCAGTCAATGGGGAAAACCACA...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAATTTCAGACATATCTTaGAGATCGCCGCACTCGGAC +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTISDIS*RSPHSD
Trigger: GTCCGAGTGCGGCGATCTTCAAGATATGTCTGAAAT...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACCATCGTTGATGGCTTaGCGTGCGTACTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLPSLMA*RAYFSI
Trigger: GATGGAGAAGTACGCACGTCAAGCCATCAACGATGG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAAAAACTCCCGTAATGTaGTCTGAGCAACTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKKTPVM*SEQLPG
Trigger: TCCTGGAAGTTGCTCAGATCACATTACGGGAGTTTT...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATTGTGCTGACAATAATTaGGTTCATACATTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANCADNN*VHTFLS
Trigger: GGACAGGAATGTATGAACTCAATTATTGTCAGCACA...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTGCATTAGTAGAGTGTaGGCTGGGAGATGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFCISRV*AGRCVR
Trigger: CCTCACACATCTCCCAGCTCACACTCTACTAATGCA...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGTGCCTCAGTGAACATTaGGAGGATATTATCAGTAGA +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWCLSEH*EDIISR
Trigger: TCTACTGATAATATCCTCTCAATGTTCACTGAGGCA...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAAGGGGGTGTCAGATTTaGGAGAAGGCTCAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTRGCQI*EKAQLK
Trigger: TTTCAACTGAGCCTTCTCTCAAATCTGACACCCCCT...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACGAGTGCACACACGGTaGTATCTTGCGGGTGATGAA +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLRVHTR*YLAGDE
Trigger: TTCATCACCCGCAAGATATCACCGTGTGTGCACTCG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAACTGGACGGTTATTGTaGCATCTTCAAAAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKTGRLL*HLQKLV
Trigger: GACGAGCTTTTGAAGATGGCACAATAACCGTCCAGT...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTCTTCTCCTCTTGGTTTaGCGGCTTAAGAGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFLLLLV*RLKRAV
Trigger: CACAGCCCTCTTAAGCCGGCAAACCAAGAGGAGAAG...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATCCCCATCTGCATGCTaGACCACTGAATACTCAACA +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTSPSAC*TTEYST
Trigger: TGTTGAGTATTCAGTGGTGCAGCATGCAGATGGGGA...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATTTTCCCCATCTGCATaGTGCACCACTGAATACTCA +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKFSPSA*CTTEYS
Trigger: TGAGTATTCAGTGGTGCAGCATGCAGATGGGGAAAA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACGCTTTGCTCTCAGGTaGTCATCACATAAGCGATCC +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRRFALR*SSHKRS
Trigger: GGATCGCTTATGTGATGAGCACCTGAGAGCAAAGCG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTTGGAAACTCTGTTGCTaGTGCTGGGGAAGCTTTTGC +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIWKLCC*CWGSFC
Trigger: GCAAAAGCTTCCCCAGCAGCAGCAACAGAGTTTCCA...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAACAGTGTCCACAACTTaGGACATGGCAGTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTTVSTT*DMAVFS
Trigger: ACTGAACACTGCCATGTCGCAAGTTGTGGACACTGT...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAGTGGAACTGGCCATCTaGACATTGCCAAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLVELAI*TLPKVS
Trigger: GGACACCTTTGGCAATGTGCAGATGGCCAGTTCCAC...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGGACACGAACAAGGACTaGCATCCTCTTTTAAAACAA +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWDTNKD*HPLLKQ
Trigger: TTGTTTTAAAAGAGGATGGCAGTCCTTGTTCGTGTC...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAATGGTCAGGCATCACTaGACGGTTATTGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVMVRHH*TVIVPS
Trigger: AGATGGCACAATAACCGTCCAGTGATGCCTGACCAT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAATGGTCAGGCATCACTaGACGGTTATTGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTMVRHH*TVIVPS
Trigger: AGATGGCACAATAACCGTCCAGTGATGCCTGACCAT...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTCAACTCTTCTCCTCTTaGTTTGCCGGCTTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIQLFSS*FAGLRG
Trigger: CCCTCTTAAGCCGGCAAACCAAGAGGAGAAGAGTTG...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCCAACTCTTCTCCTCTTaGTTTGCCGGCTTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFQLFSS*FAGLRG
Trigger: CCCTCTTAAGCCGGCAAACCAAGAGGAGAAGAGTTG...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATCCTGCTCAGAACCTTaGGGATTCATGGCACTAAAA +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKSCSEP*GFMALK
Trigger: TTTTAGTGCCATGAATCCCCAAGGTTCTGAGCAGGA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACTGGAAAAGGCATCATaGCATCTTCATACGAGTTCG +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKLEKAS*HLHTSS
Trigger: CGAACTCGTATGAAGATGCCATGATGCCTTTTCCAG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCAATTATGGTTGCTCCTaGAAAAGGCATCATGGCATC +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGNYGCS*KRHHGI
Trigger: GATGCCATGATGCCTTTTCCAGGAGCAACCATAATT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACACGATCCATATCAAACTaGCTCATAGTAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTRSISN*LIVGLP
Trigger: TGGCAGGCCTACTATGAGCCAGTTTGATATGGATCG...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTCTCTGTTGCTGCTGCTaGGGAAGCTTTTGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFLCCCC*GSFCLR
Trigger: ACGCAAGCAAAAGCTTCCCCAGCAGCAGCAACAGAG...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAAACTTTTCCTGCAGCTaGCGCAGCTGTTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRNFSCS*RSCFCM
Trigger: CATGCAGAAACAGCTGCGCCAGCTGCAGGAAAAGTT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGCGGTGTGGAAATTGTaGTTTTCCCCATTGACTGCA +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVAVWKL*FSPLTA
Trigger: TGCAGTCAATGGGGAAAACCACAATTTCCACACCGC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTCGCTGGTTGGCGGTGTaGAAATTGTGGTTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFRWLAV*KLWFSP
Trigger: TGGGGAAAACCACAATTTCCACACCGCCAACCAGCG...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTCTGGTCAGTGGAACTaGCCATCTGCACATTGCCAA +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFSGQWN*PSAHCQ
Trigger: TTGGCAATGTGCAGATGGCCAGTTCCACTGACCAGA...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACTTCTGTCTGGTCAGTaGAACTGGCCATCTGCACAT +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRLLSGQ*NWPSAH
Trigger: ATGTGCAGATGGCCAGTTCCACTGACCAGACAGAAG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAAGGTCTTCAGCATATTaGAGCTGGGATAACGGGTAT +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKRSSAY*SWDNGY
Trigger: ATACCCGTTATCCCAGCTCCAATATGCTGAAGACCT...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACTGCATATATCCTCCTaGTGTACTTCGGAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRLHISS*CTSEPV
Trigger: TACAGGCTCCGAAGTACATCAGGAGGATATATGCAG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACTGTTCTTTTCGGGCTaGAACCAGCTGCTGGAAACT +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLLFFSG*NQLLET
Trigger: AGTTTCCAGCAGCTGGTTTCAGCCCGAAAAGAACAG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAGCACATCTCATTATCTaGCCTTCCGACAGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLAHLII*PSDRVL
Trigger: CAGGACTCTGTCGGAAGGTCAGATAATGAGATGTGC...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCATTTCAGACATATCTTaGAGATCGCCGCACTCGGAC +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFISDIS*RSPHSD
Trigger: GTCCGAGTGCGGCGATCTTCAAGATATGTCTGAAAT...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTTCCCGTAATGTGATCTaGGCAACTTCCAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEISRNVI*ATSRNL
Trigger: GAGATTCCTGGAAGTTGCTCAGATCACATTACGGGA...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATATCCAGCTTGCAGATaGCCTTGTATATGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTYPACR*PCIWPS
Trigger: AGAAGGCCATATACAAGGTCATCTGCAAGCTGGATA...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAGGCAGTTCGGGGATTTaGAAATCTCAGGGACTTCAC +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLGSSGI*KSQGLH
Trigger: GTGAAGTCCCTGAGATTTTCAAATCCCCGAACTGCC...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATGTAAGGAAAAGCTACTaGTTGAGTTCAAACCAAACA +
Preference number: 4 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANVRKSY*LSSNQT
Trigger: TGTTTGGTTTGAACTCAATCAGTAGCTTTTCCTTAC...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAGGTACTTTGGAAAAGTaGGCTGCTCATCTGTCATTG +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTGTLEK*AAHLSL
Trigger: CAATGACAGATGAGCAGCTCACTTTTCCAAAGTACC...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCCTACAAGACCAGGTATaGATTTCTAGTCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGLQDQV*ISSLIL
Trigger: CAAGATGAGACTAGAAATTCATACCTGGTCTTGTAG...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGTCAATACTAGCTTCTaGATTGGAAGAGGCATTATC +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVVNTSF*IGRGII
Trigger: GATAATGCCTCTTCCAATTCAGAAGCTAGTATTGAC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGTCTGGAATCAATATTaGACTCGCCCCAGATCAAAA +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKVWNQY*TRPRSK
Trigger: TTTTGATCTGGGGCGAGTTCAATATTGATTCCAGAC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCAGGGGGTGTCAGATTTaGGAGAAGGCTCAGTTGAAA +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFRGCQI*EKAQLK
Trigger: TTTCAACTGAGCCTTCTCTCAAATCTGACACCCCCT...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGAATACTCAACATCCTaGTCAGAACCTTGGGGATTC +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVEYSTS*SEPWGF
Trigger: GAATCCCCAAGGTTCTGAGCAGGATGTTGAGTATTC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGATCCCCATCTGCATGCTaGACCACTGAATACTCAACA +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRSPSAC*TTEYST
Trigger: TGTTGAGTATTCAGTGGTGCAGCATGCAGATGGGGA...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTCGCTTTGCTCTCAGGTaGTCATCACATAAGCGATCC +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFRFALR*SSHKRS
Trigger: GGATCGCTTATGTGATGAGCACCTGAGAGCAAAGCG...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTAAACTCTGTTGCTGCTaGTGGGGAAGCTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIKLCCC*WGSFCL
Trigger: CAAGCAAAAGCTTCCCCAGCAGCAGCAACAGAGTTT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAAAACTCTGTTGCTGCTaGTGGGGAAGCTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRKLCCC*WGSFCL
Trigger: CAAGCAAAAGCTTCCCCAGCAGCAGCAACAGAGTTT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTTTTTCAGCCATTTCCTaGTCTCTGATCAGGGCTCGA +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIFSAIS*SLIRAR
Trigger: TCGAGCCCTGATCAGAGAGCAGGAAATGGCTGAAAA...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCACAGTGTCCACAACTTaGGACATGGCAGTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFTVSTT*DMAVFS
Trigger: ACTGAACACTGCCATGTCGCAAGTTGTGGACACTGT...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGGTTTTGTGCAAAATTaGTTTGCCTCCAGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGGFVQN*FASRRN
Trigger: GTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGACAATGAATTCTTACTaGATCTGGACACAAAAACCC +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWTMNSY*IWTQKP
Trigger: GGGTTTTTGTGTCCAGATGCAGTAAGAATTCATTGT...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGACACGAACAAGGACTaGCATCCTCTTTTAAAACAA +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGDTNKD*HPLLKQ
Trigger: TTGTTTTAAAAGAGGATGGCAGTCCTTGTTCGTGTC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATCTTCACATATACACTaGTTCTTTCAGGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKSSHIH*FFQGSL
Trigger: CAGACTCCCCTGAAAGAAGCAGTGTATATGTGAAGA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTATTCTGCTTATGTTTGTaGATTCTGAGGGGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVFCLCL*ILRGCQ
Trigger: CTGACACCCCCTCAGAATGCACAAACATAAGCAGAA...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAAACTTTTCCTGCAGCTaGCGCAGCTGTTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLNFSCS*RSCFCM
Trigger: CATGCAGAAACAGCTGCGCCAGCTGCAGGAAAAGTT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTAACTTTTCCTGCAGCTaGCGCAGCTGTTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFNFSCS*RSCFCM
Trigger: CATGCAGAAACAGCTGCGCCAGCTGCAGGAAAAGTT...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACCACAACTTGCGACATaGCAGTGTTCAGTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRPQLAT*QCSVPV
Trigger: AACAGGAACTGAACACTGCCATGTCGCAAGTTGTGG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTCCACAACTTGCGACATaGCAGTGTTCAGTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIPQLAT*QCSVPV
Trigger: AACAGGAACTGAACACTGCCATGTCGCAAGTTGTGG...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGCGGTGTGGAAATTGTaGTTTTCCCCATTGACTGCA +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRAVWKL*FSPLTA
Trigger: TGCAGTCAATGGGGAAAACCACAATTTCCACACCGC...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTATCTGGTCAGTGGAACTaGCCATCTGCACATTGCCAA +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLSGQWN*PSAHCQ
Trigger: TTGGCAATGTGCAGATGGCCAGTTCCACTGACCAGA...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGGTGAGATGACATCTTaGTCCTCAGACTCGTGGTAT +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRGEMTS*SSDSWY
Trigger: ATACCACGAGTCTGAGGACCAAGATGTCATCTCACC...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATTCCAGGAATCTCTCTaGAACCTCAAAGTCATTTGC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKFQESL*NLKVIC
Trigger: GCAAATGACTTTGAGGTTCCAGAGAGATTCCTGGAA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAAGTTGTGCTGTGTCATaGGTTTTCCTCAGCCAACCG +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLSCAVS*VFLSQP
Trigger: CGGTTGGCTGAGGAAAACCCATGACACAGCACAACT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTACAGCAAAAACCCAGTaGCACACTGACACGAACAAG +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEITAKTQ*HTDTNK
Trigger: CTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACATATGAGAAATGGCTaGGACAATATTGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKHMRNG*DNIEGS
Trigger: GCTTCCCTCAATATTGTCCCAGCCATTTCTCATATG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGATGAATATGATAATTaGACAAGGGACGGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGDEYDN*TRDGES
Trigger: AGACTCACCGTCCCTTGTCCAATTATCATATTCATC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACTTGCGGAGTACATTTaGCTTTTCCCCATCTGCATG +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLLAEYI*LFPICM
Trigger: CATGCAGATGGGGAAAAGTCAAATGTACTCCGCAAG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTCTTGCGGAGTACATTTaGCTTTTCCCCATCTGCATG +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFLAEYI*LFPICM
Trigger: CATGCAGATGGGGAAAAGTCAAATGTACTCCGCAAG...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCACTTCCCGAATAAGGTaGTATTTCAGACATATCTTG +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVTSRIR*YFRHIL
Trigger: CAAGATATGTCTGAAATATCACCTTATTCGGGAAGT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCACTTCCCGAATAAGGTaGTATTTCAGACATATCTTG +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGTSRIR*YFRHIL
Trigger: CAAGATATGTCTGAAATATCACCTTATTCGGGAAGT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGATTTCAAGTGATTGGGTaGCAATCCTTCCTGCATTGC +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRFQVIG*QSFLHC
Trigger: GCAATGCAGGAAGGATTGTCACCCAATCACTTGAAA...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTATCCCGTAATGTGATCTaGGCAACTTCCAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLSRNVI*ATSRNL
Trigger: GAGATTCCTGGAAGTTGCTCAGATCACATTACGGGA...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTAAAACTCCCGTAATGTaGTCTGAGCAACTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIKTPVM*SEQLPG
Trigger: TCCTGGAAGTTGCTCAGATCACATTACGGGAGTTTT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAAAAACTCCCGTAATGTaGTCTGAGCAACTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRKTPVM*SEQLPG
Trigger: TCCTGGAAGTTGCTCAGATCACATTACGGGAGTTTT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGTAAGGAAAAGCTACTaGTTGAGTTCAAACCAAACA +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVVRKSY*LSSNQT
Trigger: TGTTTGGTTTGAACTCAATCAGTAGCTTTTCCTTAC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGGTACTTTGGAAAAGTaGGCTGCTCATCTGTCATTG +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFGTLEK*AAHLSL
Trigger: CAATGACAGATGAGCAGCTCACTTTTCCAAAGTACC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACTACAAGACCAGGTATaGATTTCTAGTCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKLQDQV*ISSLIL
Trigger: CAAGATGAGACTAGAAATTCATACCTGGTCTTGTAG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATGCCTCAGTGAACATTaGGAGGATATTATCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKCLSEH*EDIISR
Trigger: TCTACTGATAATATCCTCTCAATGTTCACTGAGGCA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGAGAGAAGGCTCAGTTaGAAAGACTCAAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFERRLS*KDSKSR
Trigger: TCTGGACTTTGAGTCTTTTCAACTGAGCCTTCTCTC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTACTGGACGGTTATTGTaGCATCTTCAAAAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEITGRLL*HLQKLV
Trigger: GACGAGCTTTTGAAGATGGCACAATAACCGTCCAGT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGAATACTCAACATCCTaGTCAGAACCTTGGGGATTC +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFEYSTS*SEPWGF
Trigger: GAATCCCCAAGGTTCTGAGCAGGATGTTGAGTATTC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTATCCCCATCTGCATGCTaGACCACTGAATACTCAACA +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLSPSAC*TTEYST
Trigger: TGTTGAGTATTCAGTGGTGCAGCATGCAGATGGGGA...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTTCCCCATCTGCATaGTGCACCACTGAATACTCA +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFFSPSA*CTTEYS
Trigger: TGAGTATTCAGTGGTGCAGCATGCAGATGGGGAAAA...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTCCCTCTTCAGCAGCTTaGGGAGTACATTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIPSSAA*GVHLTF
Trigger: AAAAGTCAAATGTACTCCGCAAGCTGCTGAAGAGGG...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACCCTCTTCAGCAGCTTaGGGAGTACATTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRPSSAA*GVHLTF
Trigger: AAAAGTCAAATGTACTCCGCAAGCTGCTGAAGAGGG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGGAAACTGGGCTCCGTaGCACCATTTTTGTTCATGT +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFGNWAP*HHFCSC
Trigger: ACATGAACAAAAATGGTGGCACGGAGCCCAGTTTCC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACTCTTGAAGAGTTGCTaGATATATCCTCCTGATGTA +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKLLKSC*IYPPDV
Trigger: TACATCAGGAGGATATATGCAGCAACTCTTCAAGAG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGATGGCTTGACGTaGGTACTTCTCCATCTGAAT +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRVDGLT*VLLHLN
Trigger: ATTCAGATGGAGAAGTACGCACGTCAAGCCATCAAC...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGATCAACATCTTTGCCTaGGATAATGGCATTGAAAAA +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWINIFA*DNGIEK
Trigger: TTTTTCAATGCCATTATCGCAGGCAAAGATGTTGAT...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACACAGCCAACCGCCATTTaGAATAAGTCATCAATCAAG +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTQPTAI*NKSSIK
Trigger: CTTGATTGATGACTTATTGCAAATGGCGGTTGGCTG...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCTTTGGAAAAGTGAGCTaGTCATCTGTCATTGGAATT +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGFGKVS*SSVIGI
Trigger: AATTCCAATGACAGATGAGCAGCTCACTTTTCCAAA...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCCCCCAAATTTTCCTATaGTATACACTCTTCTCACAT +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGPQIFL*YTLFSH
Trigger: ATGTGAGAAGAGTGTATAGCATAGGAAAATTTGGGG...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAATGGTCAGGCATCACTaGACGGTTATTGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLMVRHH*TVIVPS
Trigger: AGATGGCACAATAACCGTCCAGTGATGCCTGACCAT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGATCCTGCTCAGAACCTTaGGGATTCATGGCACTAAAA +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRSCSEP*GFMALK
Trigger: TTTTAGTGCCATGAATCCCCAAGGTTCTGAGCAGGA...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACTGGAAAAGGCATCATaGCATCTTCATACGAGTTCG +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRLEKAS*HLHTSS
Trigger: CGAACTCGTATGAAGATGCCATGATGCCTTTTCCAG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAAAGGAGTTTGGCCCATaGTCTCTTTCTTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVKEFGP*SLSLLL
Trigger: CAACAACAAAGAAAGAGACCATGGGCCAAACTCCTT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAAGGTCTTCAGCATATTaGAGCTGGGATAACGGGTAT +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRRSSAY*SWDNGY
Trigger: ATACCCGTTATCCCAGCTCCAATATGCTGAAGACCT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCCAGGAATCTCTCTaGAACCTCAAAGTCATTTGC +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTFQESL*NLKVIC
Trigger: GCAAATGACTTTGAGGTTCCAGAGAGATTCCTGGAA...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCACTGTGACTACAAGTTaGGATTACTTCCCTATTTTG +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGTVTTS*DYFPIL
Trigger: CAAAATAGGGAAGTAATCCCAACTTGTAGTCACAGT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGCTTTTACCTTGCAAATaGCAACACAAAGTTGATATG +
Preference number: 4 (lower is better)
Translates to: HLERAGFVQNCFASRRNWLLPCK*QHKVDM
Trigger: CATATCAACTTTGTGTTGCCATTTGCAAGGTAAAAG...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTACAGTTTAAGAGGAGATaGAAGGCACACAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVQFKRR*KAHKAI
Trigger: AATTGCCTTGTGTGCCTTCCATCTCCTCTTAAACTG...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGATGAATATGATAATTaGACAAGGGACGGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKDEYDN*TRDGES
Trigger: AGACTCACCGTCCCTTGTCCAATTATCATATTCATC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
3UTR CAA 72 bp GTCACCACTTTGCATACCCATCAGGATAGTGTGGAATaGCTTGTGAAAATATATGTGTTCCTCTTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VTTLHTHQDSVE*LVKIYVFLLGD
Trigger: ATCTCCTAAGAGGAACACATATATTTTCACAAGCAATTCCACACTATCCTGATGGGTATGCAAAGTGGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAATGTTTACACGGGTCTaGGTAATGGGAGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLMFTRV*VMGGSF
Trigger: AAAAGAGCCTCCCATTACTCAGACCCGTGTAAACAT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261454.8
ENST00000435016.2
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTATTTCAAGTGATTGGGTaGCAATCCTTCCTGCATTGC +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLFQVIG*QSFLHC
Trigger: GCAATGCAGGAAGGATTGTCACCCAATCACTTGAAA...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTTATCCAGCTTGCAGATaGCCTTGTATATGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFYPACR*PCIWPS
Trigger: AGAAGGCCATATACAAGGTCATCTGCAAGCTGGATA...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAGGAGGAATTACCAGCTaGTTTCATAACATATCCATG +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTGGITS*FHNISM
Trigger: CATGGATATGTTATGAAATCAGCTGGTAATTCCTCC...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACACTACAAGACCAGGTATaGATTTCTAGTCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTLQDQV*ISSLIL
Trigger: CAAGATGAGACTAGAAATTCATACCTGGTCTTGTAG...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGTTCCTCTTAGGAGATaGCGATCAAGTCAGCTAATG +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFVPLRR*RSSQLM
Trigger: CATTAGCTGACTTGATCGTCATCTCCTAAGAGGAAC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAAAAATGAAGAAACACTaGGTTAGACTGTCACCACTT +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKKMKKH*VRLSPL
Trigger: AAGTGGTGACAGTCTAACTCAGTGTTTCTTCATTTT...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTATGTGCTGACAATAATTaGGTTCATACATTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVCADNN*VHTFLS
Trigger: GGACAGGAATGTATGAACTCAATTATTGTCAGCACA...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACCAGTCAGAAAACTGTaGCTACAAGTTGGGATTACT +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRPVRKL*LQVGIT
Trigger: AGTAATCCCAACTTGTAGTCACAGTTTTCTGACTGG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTGTCTGGAATCAATATTaGACTCGCCCCAGATCAAAA +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIVWNQY*TRPRSK
Trigger: TTTTGATCTGGGGCGAGTTCAATATTGATTCCAGAC...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGATTCAGAACAAAGAGGTaGGTTTATCCTCATGCTGCA +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRFRTKR*VYPHAA
Trigger: TGCAGCATGAGGATAAACTCACCTCTTTGTTCTGAA...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTTTCAGAACAAAGAGGTaGGTTTATCCTCATGCTGCA +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIFRTKR*VYPHAA
Trigger: TGCAGCATGAGGATAAACTCACCTCTTTGTTCTGAA...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGAGAGAAGGCTCAGTTaGAAAGACTCAAAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFERRLS*KDSKSR
Trigger: TCTGGACTTTGAGTCTTTTCAACTGAGCCTTCTCTC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTACTGGACGGTTATTGTaGCATCTTCAAAAGCTCGTC +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFTGRLL*HLQKLV
Trigger: GACGAGCTTTTGAAGATGGCACAATAACCGTCCAGT...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACCCTCTTCAGCAGCTTaGGGAGTACATTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLPSSAA*GVHLTF
Trigger: AAAAGTCAAATGTACTCCGCAAGCTGCTGAAGAGGG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTACTCTTGAAGAGTTGCTaGATATATCCTCCTGATGTA +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVLLKSC*IYPPDV
Trigger: TACATCAGGAGGATATATGCAGCAACTCTTCAAGAG...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGTTGATGGCTTGACGTaGGTACTTCTCCATCTGAAT +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFVDGLT*VLLHLN
Trigger: ATTCAGATGGAGAAGTACGCACGTCAAGCCATCAAC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCATCAACATCTTTGCCTaGGATAATGGCATTGAAAAA +
Preference number: 4 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGINIFA*DNGIEK
Trigger: TTTTTCAATGCCATTATCGCAGGCAAAGATGTTGAT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAACATCCAAAGGGGACTaGTACTCTTCATACATTCAA +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVTSKGD*YSSYIQ
Trigger: TTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAACATCCAAAGGGGACTaGTACTCTTCATACATTCAA +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTTSKGD*YSSYIQ
Trigger: TTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGT...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTATGTGCAAAATTGCTTTaGCTCCAGAAGAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVCAKLL*LQKKLV
Trigger: TACCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACA...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAGGTTTTGTGCAAAATTaGTTTGCCTCCAGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTGFVQN*FASRRN
Trigger: GTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACC...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAAGAGAGCTGGTTTTGTaGAAAATTGCTTTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRRELVL*KIALPP
Trigger: TGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTAGACTGTCACCACTTTaGATACCCATCAGGATAGTG +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFRLSPL*IPIRIV
Trigger: CACTATCCTGATGGGTATGCAAAGTGGTGACAGTCT...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAAGACTGTCACCACTTTaGATACCCATCAGGATAGTG +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLRLSPL*IPIRIV
Trigger: CACTATCCTGATGGGTATGCAAAGTGGTGACAGTCT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAACAATGAATTCTTACTaGATCTGGACACAAAAACCC +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKTMNSY*IWTQKP
Trigger: GGGTTTTTGTGTCCAGATGCAGTAAGAATTCATTGT...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGACACGAACAAGGACTaGCATCCTCTTTTAAAACAA +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVDTNKD*HPLLKQ
Trigger: TTGTTTTAAAAGAGGATGGCAGTCCTTGTTCGTGTC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACTTTGCCTTTTACCTTaGAAATGGCAACACAAAGTT +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKLCLLP*KWQHKV
Trigger: AACTTTGTGTTGCCATTTGCAAGGTAAAAGGCAAAG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTTCCTGCTCAGAACCTTaGGGATTCATGGCACTAAAA +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFSCSEP*GFMALK
Trigger: TTTTAGTGCCATGAATCCCCAAGGTTCTGAGCAGGA...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTCTGGAAAAGGCATCATaGCATCTTCATACGAGTTCG +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFLEKAS*HLHTSS
Trigger: CGAACTCGTATGAAGATGCCATGATGCCTTTTCCAG...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTAATTATGGTTGCTCCTaGAAAAGGCATCATGGCATC +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEINYGCS*KRHHGI
Trigger: GATGCCATGATGCCTTTTCCAGGAGCAACCATAATT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCAATTATGGTTGCTCCTaGAAAAGGCATCATGGCATC +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFNYGCS*KRHHGI
Trigger: GATGCCATGATGCCTTTTCCAGGAGCAACCATAATT...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTAAGGAGTTTGGCCCATaGTCTCTTTCTTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIKEFGP*SLSLLL
Trigger: CAACAACAAAGAAAGAGACCATGGGCCAAACTCCTT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAAGGTCTTCAGCATATTaGAGCTGGGATAACGGGTAT +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLRSSAY*SWDNGY
Trigger: ATACCCGTTATCCCAGCTCCAATATGCTGAAGACCT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTTTCCAGGAATCTCTCTaGAACCTCAAAGTCATTTGC +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIFQESL*NLKVIC
Trigger: GCAAATGACTTTGAGGTTCCAGAGAGATTCCTGGAA...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCACTCTTCTCACATTTTaGTCAATACTAGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVTLLTF*SILASE
Trigger: TTCAGAAGCTAGTATTGACCAAAATGTGAGAAGAGT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCCATATGAGAAATGGCTaGGACAATATTGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFHMRNG*DNIEGS
Trigger: GCTTCCCTCAATATTGTCCCAGCCATTTCTCATATG...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCCTACTGTCCTACAATTaGATACAGGTCCAAAAATTA +
Preference number: 4 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVLLSYN*IQVQKL
Trigger: TAATTTTTGGACCTGTATCCAATTGTAGGACAGTAG...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAACTTCCCGAATAAGGTaGTATTTCAGACATATCTTG +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVTSRIR*YFRHIL
Trigger: CAAGATATGTCTGAAATATCACCTTATTCGGGAAGT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGGAGGAATTACCAGCTaGTTTCATAACATATCCATG +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRGGITS*FHNISM
Trigger: CATGGATATGTTATGAAATCAGCTGGTAATTCCTCC...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGTCAATACTAGCTTCTaGATTGGAAGAGGCATTATC +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFVNTSF*IGRGII
Trigger: GATAATGCCTCTTCCAATTCAGAAGCTAGTATTGAC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGATGTGCTGACAATAATTaGGTTCATACATTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRCADNN*VHTFLS
Trigger: GGACAGGAATGTATGAACTCAATTATTGTCAGCACA...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTCCAGTCAGAAAACTGTaGCTACAAGTTGGGATTACT +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFPVRKL*LQVGIT
Trigger: AGTAATCCCAACTTGTAGTCACAGTTTTCTGACTGG...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAATGGCAACACAAAGTTaGTATGAATTACACGGAACA +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVMATQS*YELHGT
Trigger: TGTTCCGTGTAATTCATATCAACTTTGTGTTGCCAT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAATCTGTCTACATAGGTaGATACACTACAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLICLHR*IHYSFA
Trigger: GGCAAAGCTGTAGTGTATTCACCTATGTAGACAGAT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTATCTGTCTACATAGGTaGATACACTACAGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFICLHR*IHYSFA
Trigger: GGCAAAGCTGTAGTGTATTCACCTATGTAGACAGAT...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTATTCAGAACAAAGAGGTaGGTTTATCCTCATGCTGCA +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLFRTKR*VYPHAA
Trigger: TGCAGCATGAGGATAAACTCACCTCTTTGTTCTGAA...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTCTGGGAAATTATGGTTaGTCCTGGAAAAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFLGNYG*SWKRHH
Trigger: ATGATGCCTTTTCCAGGAGCAACCATAATTTCCCAG...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACTGGGAAATTATGGTTaGTCCTGGAAAAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLLGNYG*SWKRHH
Trigger: ATGATGCCTTTTCCAGGAGCAACCATAATTTCCCAG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCCTCTTGAAGAGTTGCTaGATATATCCTCCTGATGTA +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFLLKSC*IYPPDV
Trigger: TACATCAGGAGGATATATGCAGCAACTCTTCAAGAG...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACTCTTGAAGAGTTGCTaGATATATCCTCCTGATGTA +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRLLKSC*IYPPDV
Trigger: TACATCAGGAGGATATATGCAGCAACTCTTCAAGAG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTACATCCAAAGGGGACTaGTACTCTTCATACATTCAA +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEITSKGD*YSSYIQ
Trigger: TTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAACATCCAAAGGGGACTaGTACTCTTCATACATTCAA +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRTSKGD*YSSYIQ
Trigger: TTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTCAGCCAACCGCCATTTaGAATAAGTCATCAATCAAG +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFQPTAI*NKSSIK
Trigger: CTTGATTGATGACTTATTGCAAATGGCGGTTGGCTG...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACAGCCAACCGCCATTTaGAATAAGTCATCAATCAAG +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLQPTAI*NKSSIK
Trigger: CTTGATTGATGACTTATTGCAAATGGCGGTTGGCTG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACAGGATTTTCAAGAATaGTTTCAACTGTCTATACAG +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKQDFQE*FQLSIQ
Trigger: CTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGAAGGTAAGCTTGTTTaGCTTTTCTGCTTATGTTTG +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVEGKLV*LFCLCL
Trigger: CAAACATAAGCAGAAAAGGCAAACAAGCTTACCTTC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTAATTATGGTTGCTCCTaGAAAAGGCATCATGGCATC +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFNYGCS*KRHHGI
Trigger: GATGCCATGATGCCTTTTCCAGGAGCAACCATAATT...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAAAGGAGTTTGGCCCATaGTCTCTTTCTTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLKEFGP*SLSLLL
Trigger: CAACAACAAAGAAAGAGACCATGGGCCAAACTCCTT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CCA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAACTCTTCTCACATTTTaGTCAATACTAGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKTLLTF*SILASE
Trigger: TTCAGAAGCTAGTATTGACCAAAATGTGAGAAGAGT...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
3UTR CAA 72 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATaGCTAATAGAGACTTTACACACGCCAACATTCTTT +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPS*LIETLHTPTFF
Trigger: AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTGTAAGGAAAAGCTACTaGTTGAGTTCAAACCAAACA +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIVRKSY*LSSNQT
Trigger: TGTTTGGTTTGAACTCAATCAGTAGCTTTTCCTTAC...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAAAAATGAAGAAACACTaGGTTAGACTGTCACCACTT +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRKMKKH*VRLSPL
Trigger: AAGTGGTGACAGTCTAACTCAGTGTTTCTTCATTTT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTATGGCAACACAAAGTTaGTATGAATTACACGGAACA +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIMATQS*YELHGT
Trigger: TGTTCCGTGTAATTCATATCAACTTTGTGTTGCCAT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTATGCCTCAGTGAACATTaGGAGGATATTATCAGTAGA +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLCLSEH*EDIISR
Trigger: TCTACTGATAATATCCTCTCAATGTTCACTGAGGCA...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTACATCCCTAGTACAGTaGCAAAGATTCTGCAAACAT +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFTSLVQ*QRFCKH
Trigger: ATGTTTGCAGAATCTTTGTCACTGTACTAGGGATGT...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCCATTTTCCGAATCAGTaGTGTCATAGATTTGGTAGA +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFHFPNQ*CHRFGR
Trigger: TCTACCAAATCTATGACAGCACTGATTCGGAAAATG...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAATCAACATCTTTGCCTaGGATAATGGCATTGAAAAA +
Preference number: 4 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVINIFA*DNGIEK
Trigger: TTTTTCAATGCCATTATCGCAGGCAAAGATGTTGAT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGGAAAAGTGAGCTaGTCATCTGTCATTGGAATT +
Preference number: 4 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFFGKVS*SSVIGI
Trigger: AATTCCAATGACAGATGAGCAGCTCACTTTTCCAAA...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAGGTTTTGTGCAAAATTaGTTTGCCTCCAGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLGFVQN*FASRRN
Trigger: GTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACC...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTCCCCAAATTTTCCTATaGTATACACTCTTCTCACAT +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIPQIFL*YTLFSH
Trigger: ATGTGAGAAGAGTGTATAGCATAGGAAAATTTGGGG...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAACAATGAATTCTTACTaGATCTGGACACAAAAACCC +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRTMNSY*IWTQKP
Trigger: GGGTTTTTGTGTCCAGATGCAGTAAGAATTCATTGT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACTTTGCCTTTTACCTTaGAAATGGCAACACAAAGTT +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRLCLLP*KWQHKV
Trigger: AACTTTGTGTTGCCATTTGCAAGGTAAAAGGCAAAG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTAATACACTACAGCTTTaGCTTTTACCTTGCAAATGG +
Preference number: 4 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEINTLQL*LLPCKW
Trigger: CCATTTGCAAGGTAAAAGGCAAAGCTGTAGTGTATT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGAAGGTAAGCTTGTTTaGCTTTTCTGCTTATGTTTG +
Preference number: 4 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKREGKLV*LFCLCL
Trigger: CAAACATAAGCAGAAAAGGCAAACAAGCTTACCTTC...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR TCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGTAAGGAAAAGCTACTaGTTGAGTTCAAACCAAACA +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFVRKSY*LSSNQT
Trigger: TGTTTGGTTTGAACTCAATCAGTAGCTTTTCCTTAC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR TCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTATGGCAACACAAAGTTaGTATGAATTACACGGAACA +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFMATQS*YELHGT
Trigger: TGTTCCGTGTAATTCATATCAACTTTGTGTTGCCAT...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACATTTTCCGAATCAGTaGTGTCATAGATTTGGTAGA +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLHFPNQ*CHRFGR
Trigger: TCTACCAAATCTATGACAGCACTGATTCGGAAAATG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR GCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAAATACACTACAGCTTTaGCTTTTACCTTGCAAATGG +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLNTLQL*LLPCKW
Trigger: CCATTTGCAAGGTAAAAGGCAAAGCTGTAGTGTATT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGAAGGTAAGCTTGTTTaGCTTTTCTGCTTATGTTTG +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFEGKLV*LFCLCL
Trigger: CAAACATAAGCAGAAAAGGCAAACAAGCTTACCTTC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAACTGTGACTACAAGTTaGGATTACTTCCCTATTTTG +
Preference number: 4 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLTVTTS*DYFPIL
Trigger: CAAAATAGGGAAGTAATCCCAACTTGTAGTCACAGT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR GCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTCAGGATTTTCAAGAATaGTTTCAACTGTCTATACAG +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFQDFQE*FQLSIQ
Trigger: CTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTG...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTACTCTTCTCACATTTTaGTCAATACTAGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFTLLTF*SILASE
Trigger: TTCAGAAGCTAGTATTGACCAAAATGTGAGAAGAGT...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CCA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTCTACTGTCCTACAATTaGATACAGGTCCAAAAATTA +
Preference number: 4 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFLLSYN*IQVQKL
Trigger: TAATTTTTGGACCTGTATCCAATTGTAGGACAGTAG...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS CCA 90 bp GTGAAGCCCGTGGTGGCAGAGAGAGGCGACTGGTGCAGGGGCTGGTaGTGGCCGCCAGCGGCAGGGCCGGAGGCAGACTGGTCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: VKPVVAERGDWCRGW*WPPAAGPEADWSEE
Trigger: CTCCTCTGACCAGTCTGCCTCCGGCCCTGCCGCTGGCGGCCACCACCAGCCCCTGCACCAGTCGCCTCTCTCTGCCACCACGGGCTTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 90 bp GTGGTGAAGCCCGTGGTGGCAGAGAGAGGCGACTGGTGCAGGGGCTaGTGGTGGCCGCCAGCGGCAGGGCCGGAGGCAGACTGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: VVKPVVAERGDWCRG*WWPPAAGPEADWSE
Trigger: CTCTGACCAGTCTGCCTCCGGCCCTGCCGCTGGCGGCCACCACCAGCCCCTGCACCAGTCGCCTCTCTCTGCCACCACGGGCTTCACCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCACTGCAGGCGCTGGTaGGCGGTGTGGAAATTGTGG +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPHCRRW*AVWKLW
Trigger: CCACAATTTCCACACCGCCAACCAGCGCCTGCAGTG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS CCA 90 bp AAGCCCGTGGTGGCAGAGAGAGGCGACTGGTGCAGGGGCTGGTGGTaGCCGCCAGCGGCAGGGCCGGAGGCAGACTGGTCAGAGGAGTTT +
Preference number: 5 (lower is better)
Translates to: KPVVAERGDWCRGWW*PPAAGPEADWSEEF
Trigger: AAACTCCTCTGACCAGTCTGCCTCCGGCCCTGCCGCTGGCGGCCACCACCAGCCCCTGCACCAGTCGCCTCTCTCTGCCACCACGGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS TCA 90 bp CTCCTCCAGTGTGCCAGGGCACGTGTGCTTCCCGAGCCTCCTCCCTaGCTGCGACTCGGGACCGCCGAATCCTGCGAGGAATACGCCTGC +
Preference number: 5 (lower is better)
Translates to: LLQCARARVLPEPPP*LRLGTAESCEEYAC
Trigger: GCAGGCGTATTCCTCGCAGGATTCGGCGGTCCCGAGTCGCAGTCAGGGAGGAGGCTCGGGAAGCACACGTGCCCTGGCACACTGGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471129.1
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCCCATCGTTGATGGCTaGACGTGCGTACTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPPIVDG*TCVLLH
Trigger: ATGGAGAAGTACGCACGTCAAGCCATCAACGATGGG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS GCA 90 bp TCCAGTGTGCCAGGGCACGTGTGCTTCCCGAGCCTCCTCCCTGACTaGGACTCGGGACCGCCGAATCCTGCGAGGAATACGCCTGCGTGT +
Preference number: 5 (lower is better)
Translates to: SSVPGHVCFPSLLPD*DSGPPNPARNTPAC
Trigger: ACACGCAGGCGTATTCCTCGCAGGATTCGGCGGTCCCGAGTCGCAGTCAGGGAGGAGGCTCGGGAAGCACACGTGCCCTGGCACACTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471129.1
CDS GCA 90 bp AGCTCAAGAATCCCGGGACCCTCCTCCAGTGTGCCAGGGCACGTGTaGTTCCCGAGCCTCCTCCCTGACTGCGACTCGGGACCGCCGAAT +
Preference number: 5 (lower is better)
Translates to: SSRIPGPSSSVPGHV*FPSLLPDCDSGPPN
Trigger: ATTCGGCGGTCCCGAGTCGCAGTCAGGGAGGAGGCTCGGGAAGCACACGTGCCCTGGCACACTGGAGGAGGGTCCCGGGATTCTTGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471129.1
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTTCAACTCTTCTCCTCTaGGTTTGCCGGCTTAAGAGG +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPSTLLL*VCRLKR
Trigger: CCTCTTAAGCCGGCAAACCAAGAGGAGAAGAGTTGA...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTGTCTCAGCCAAATGTTaGCCTTCCGGTTGTAAGGAG +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPVSAKC*PSGCKE
Trigger: CTCCTTACAACCGGAAGGCAAACATTTGGCTGAGAC...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTTTGTGGTTTTCCCCATaGACTGCAAATCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPLWFSP*TANLAW
Trigger: CCAGGCCAGATTTGCAGTCAATGGGGAAAACCACAA...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS GCA 90 bp GGCCGCCAGCGGCAGGGCCGGAGGCAGACTGGTCAGAGGAGTTTTTaGGGACAACCAGGGGCAGTGCTTCTGTCTGGTCAGTGGAACTGG +
Preference number: 5 (lower is better)
Translates to: GRQRQGRRQTGQRSF*GQPGAVLLSGQWNW
Trigger: CCAGTTCCACTGACCAGACAGAAGCACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACCAGTCTGCCTCCGGCCCTGCCGCTGGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTATCCTGCTCAGAACCTaGGGGATTCATGGCACTAAA +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPILLRT*GIHGTK
Trigger: TTTAGTGCCATGAATCCCCAAGGTTCTGAGCAGGAT...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCTGCTGGGGAAGCTTTaGCTTGCGTTTGTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPLLGKL*LAFVFS
Trigger: AGAGAAAACAAACGCAAGCAAAAGCTTCCCCAGCAG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCCATGGTCTCTTTCTTaGTTGTTGCCTTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPPWSLS*LLPSRF
Trigger: GAAGCGAGAAGGCAACAACAAAGAAAGAGACCATGG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTTATTTCAGACATATCTaGAAGATCGCCGCACTCGGA +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPYFRHI*KIAALG
Trigger: TCCGAGTGCGGCGATCTTCAAGATATGTCTGAAATA...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCCTGCGATAATGGCATaGAAAAACTCCCGTAATGTG +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPPAIMA*KNSRNV
Trigger: CACATTACGGGAGTTTTTCAATGCCATTATCGCAGG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCTAGACACATATAACTaGGACATCCAAAGGGGACTG +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPLDTYN*DIQRGL
Trigger: CAGTCCCCTTTGGATGTCCAAGTTATATGTGTCTAG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS GCA 90 bp GGAGAGGGAGCAGGCGGACCCGGCGAGAGCTCTTTTGCGCCGCTCTaGTTTCCCCGGCTGCAATGGTGTATTATTTCAGAGCGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: GEGAGGPGESSFAPL*FPRLQWCIISERSL
Trigger: GAGGGAGCGCTCTGAAATAATACACCATTGCAGCCGGGGAAAGCAGAGCGGCGCAAAAGAGCTCTCGCCGGGTCCGCCTGCTCCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366958.9
ENST00000498508.6
ENST00000607726.1
CDS GCA 90 bp GCGGACCCGGCGAGAGCTCTTTTGCGCCGCTCTGCTTTCCCCGGCTaGAATGGTGTATTATTTCAGAGCGCTCCCTCAGCTGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: ADPARALLRRSAFPG*NGVLFQSAPSAEGS
Trigger: GGAGCCCTCAGCTGAGGGAGCGCTCTGAAATAATACACCATTGCAGCCGGGGAAAGCAGAGCGGCGCAAAAGAGCTCTCGCCGGGTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498508.6
ENST00000607726.1
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTTTGTGCAAAATTGCTTaGCCTCCAGAAGAAACTGGT +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPLCKIA*PPEETG
Trigger: ACCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAA...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS GCA 90 bp GGAGCGAAGCGGAGAGGGAGCAGGCGGACCCGGCGAGAGCTCTTTTaGGCCGCTCTGCTTTCCCCGGCTGCAATGGTGTATTATTTCAGA +
Preference number: 5 (lower is better)
Translates to: GAKRRGSRRTRRELF*AALLSPAAMVYYFR
Trigger: TCTGAAATAATACACCATTGCAGCCGGGGAAAGCAGAGCGGCGCAAAAGAGCTCTCGCCGGGTCCGCCTGCTCCCTCTCCGCTTCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366958.9
ENST00000498508.6
ENST00000607726.1
CDS CCA 90 bp CGACTCGGGACCGCCGAATCCTGCGAGGAATACGCCTGCGTGTGTTaGAAAAGTTTCGGGTTGGGCAGGAAGGCTGGGAATCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RLGTAESCEEYACVC*KSFGLGRKAGNLLS
Trigger: GGAGAGGAGATTCCCAGCCTTCCTGCCCAACCCGAAACTTTTCCAACACACGCAGGCGTATTCCTCGCAGGATTCGGCGGTCCCGAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471129.1
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCAGGATAGTGTGGAATaGCTTGTGAAAATATATGTG +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPQDSVE*LVKIYV
Trigger: CACATATATTTTCACAAGCAATTCCACACTATCCTG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTAACTGTGACTACAAGTaGGGATTACTTCCCTATTTT +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPNCDYK*GLLPYF
Trigger: AAAATAGGGAAGTAATCCCAACTTGTAGTCACAGTT...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GGCCGCGGGTGCAGAGTGAGGTGGCTGGTGCCCCCGCCCGTGTGGCTGCACCCTCAAAAGAAGGTAAGCTaGTTTGCCTTTTCTGCTTAT +
Preference number: 5 (lower is better)
Translates to: GRGCRVRWLVPPPVWLHPQKKVS*FAFSAY
Trigger: ATAAGCAGAAAAGGCAAACAAGCTTACCTTCTTTTG...AGGGTGCAGCCACACGGGCGGGGGCACCAGCCACCTCACTCTGCACCCGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS CCA 90 bp GGCATCACTGGACGGTTATTGTGCCATCTTCAAAAGCTCGTCAGCTaGGCACAGCTCAAGAATCCCGGGACCGCGGTGCAGGGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: GITGRLLCHLQKLVS*AQLKNPGTAVQGAV
Trigger: CACTGCTCCCTGCACCGCGGTCCCGGGATTCTTGAGCTGTGCCCAGCTGACGAGCTTTTGAAGATGGCACAATAACCGTCCAGTGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS TCA 90 bp TTGACTGCAAATCTGGCCTGGGGGATCTGGAGAGGTGGGAAGACCTaGGGAACCTGGCGGGAGGGCTTGGCCGAAAAGACTTTGACCACA +
Preference number: 5 (lower is better)
Translates to: LTANLAWGIWRGGKT*GTWREGLAEKTLTT
Trigger: TGTGGTCAAAGTCTTTTCGGCCAAGCCCTCCCGCCAGGTTCCTCAGGTCTTCCCACCTCTCCAGATCCCCCAGGCCAGATTTGCAGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 90 bp GGGTCTAGCTCGCACATCTCATTATCTGACCTTCCGACAGAGTCCTaGGCCCTGGCATCCAGGATCTCCGAGCGCATGCTGTCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: GSSSHISLSDLPTES*ALASRISERMLSSD
Trigger: GTCTGAAGACAGCATGCGCTCGGAGATCCTGGATGCCAGGGCCCAGGACTCTGTCGGAAGGTCAGATAATGAGATGTGCGAGCTAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 90 bp GGCATCACTGGACGGTTATTGTGCCATCTTCAAAAGCTCGTCAGCTaGGCACAGCTCAAGAATCCCGGGACCCTCCTCCAGTGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: GITGRLLCHLQKLVS*AQLKNPGTLLQCAR
Trigger: CCTGGCACACTGGAGGAGGGTCCCGGGATTCTTGAGCTGTGCCCAGCTGACGAGCTTTTGAAGATGGCACAATAACCGTCCAGTGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471129.1
CDS TCA 90 bp GTGCTGGGCGGGTGTGCTGGTGAACAAGGGTGGTGGCTCAGGTGGTaGGATGACATCTTGGTCCTCAGACTCGTGGTATCCCTAGTTAAG +
Preference number: 5 (lower is better)
Translates to: VLGGCAGEQGWWLRW*DDILVLRLVVSLVK
Trigger: CTTAACTAGGGATACCACGAGTCTGAGGACCAAGATGTCATCTCACCACCTGAGCCACCACCCTTGTTCACCAGCACACCCGCCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS GCA 90 bp ACAACCAGGGGCAGTGCTTCTGTCTGGTCAGTGGAACTGGCCATCTaGACATTGCCAAAGGTGTCCAGGGGGTTCGGAATGATGACGTCG +
Preference number: 5 (lower is better)
Translates to: TTRGSASVWSVELAI*TLPKVSRGFGMMTS
Trigger: CGACGTCATCATTCCGAACCCCCTGGACACCTTTGGCAATGTGCAGATGGCCAGTTCCACTGACCAGACAGAAGCACTGCCCCTGGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 90 bp GGAATGATGACGTCGCCAAAGCACTGCAGGCGCTGGTTGGCGGTGTaGAAATTGTGGTTTTCCCCATTGACTGCAAATCTGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GMMTSPKHCRRWLAV*KLWFSPLTANLAWG
Trigger: CCCCCAGGCCAGATTTGCAGTCAATGGGGAAAACCACAATTTCCACACCGCCAACCAGCGCCTGCAGTGCTTTGGCGACGTCATCATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS TCA 90 bp CTGTTTCAGCTGTCGGCGCTCCTCTCGCTTCTGTTCTTTTCGGGCTaGAACCAGCTGCTGGAAACTCTGTTGCTGCTGCTGGGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: LFQLSALLSLLFFSG*NQLLETLLLLLGKL
Trigger: AAGCTTCCCCAGCAGCAGCAACAGAGTTTCCAGCAGCTGGTTTCAGCCCGAAAAGAACAGAAGCGAGAGGAGCGCCGACAGCTGAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS TCA 90 bp GGAAGACCTGAGGAACCTGGCGGGAGGGCTTGGCCGAAAAGACTTTaGCCACAGTGTCCACAACTTGCGACATGGCAGTGTTCAGTTCCT +
Preference number: 5 (lower is better)
Translates to: GRPEEPGGRAWPKRL*PQCPQLATWQCSVP
Trigger: AGGAACTGAACACTGCCATGTCGCAAGTTGTGGACACTGTGGTCAAAGTCTTTTCGGCCAAGCCCTCCCGCCAGGTTCCTCAGGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS TCA 90 bp GTGATATTTCAGACATATCTTGAAGATCGCCGCACTCGGACTTTATaGGCGACAAGGAGAGCCCTTCGGCGGTGCTGGGCGGGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: VIFQTYLEDRRTRTL*ATRRALRRCWAGVL
Trigger: CAGCACACCCGCCCAGCACCGCCGAAGGGCTCTCCTTGTCGCTCATAAAGTCCGAGTGCGGCGATCTTCAAGATATGTCTGAAATATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS GCA 90 bp GGAGGCAGACTGGTCAGAGGAGTTTTTGCGGACAACCAGGGGCAGTaGTTCTGTCTGGTCAGTGGAACTGGCCATCTGCACATTGCCAAA +
Preference number: 5 (lower is better)
Translates to: GGRLVRGVFADNQGQ*FCLVSGTGHLHIAK
Trigger: TTTGGCAATGTGCAGATGGCCAGTTCCACTGACCAGACAGAAGCACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACCAGTCTGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 90 bp TGGTCAGAGGAGTTTTTGCGGACAACCAGGGGCAGTGCTTCTGTCTaGTCAGTGGAACTGGCCATCTGCACATTGCCAAAGGTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: WSEEFLRTTRGSASV*SVELAICTLPKVSR
Trigger: CCTGGACACCTTTGGCAATGTGCAGATGGCCAGTTCCACTGACCAGACAGAAGCACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 90 bp GGCATCACTGGACGGTTATTGTGCCATCTTCAAAAGCTCGTCAGCTaGGCACAGCTCAAGAATCCCGGGACCTCCTCCTTTACCATCCCC +
Preference number: 5 (lower is better)
Translates to: GITGRLLCHLQKLVS*AQLKNPGTSSFTIP
Trigger: GGGGATGGTAAAGGAGGAGGTCCCGGGATTCTTGAGCTGTGCCCAGCTGACGAGCTTTTGAAGATGGCACAATAACCGTCCAGTGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607425.1
CDS-3UTR CAA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTTGGTCAGAGGAGTTTTaGCGGACAACCAGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPWSEEF*RTTRGS
Trigger: ACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACCA...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS GCA 90 bp AAGAGGGCTGTGCTGTCATGGTCAGGCATCACTGGACGGTTATTGTaGCATCTTCAAAAGCTCGTCAGCTGGGCACAGCTCAAGAATCCC +
Preference number: 5 (lower is better)
Translates to: KRAVLSWSGITGRLL*HLQKLVSWAQLKNP
Trigger: GGGATTCTTGAGCTGTGCCCAGCTGACGAGCTTTTGAAGATGGCACAATAACCGTCCAGTGATGCCTGACCATGACAGCACAGCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS GCA 90 bp TTCCGACAGAGTCCTGGGCCCTGGCATCCAGGATCTCCGAGCGCATaGTGTCTTCAGACAGGTTACCATCTTCATCATTTTCCGAATCAG +
Preference number: 5 (lower is better)
Translates to: FRQSPGPWHPGSPSA*CLQTGYHLHHFPNQ
Trigger: CTGATTCGGAAAATGATGAAGATGGTAACCTGTCTGAAGACAGCATGCGCTCGGAGATCCTGGATGCCAGGGCCCAGGACTCTGTCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCCGGCGAGAGCTCTTTaGCGCCGCTCTGCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANPARAL*RRSAFP
Trigger: GGGGAAAGCAGAGCGGCGCAAAAGAGCTCTCGCCGG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS GCA 90 bp CCTACCGTCCTTTTCACTCCAATGTCAACTCTTCTCCTCTTGGTTTaGCGGCTTAAGAGGGCTGTGCTGTCATGGTCAGGCATCACTGGA +
Preference number: 5 (lower is better)
Translates to: PTVLFTPMSTLLLLV*RLKRAVLSWSGITG
Trigger: TCCAGTGATGCCTGACCATGACAGCACAGCCCTCTTAAGCCGGCAAACCAAGAGGAGAAGAGTTGACATTGGAGTGAAAAGGACGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS GCA 90 bp CGGGAGGGCTTGGCCGAAAAGACTTTGACCACAGTGTCCACAACTTaGGACATGGCAGTGTTCAGTTCCTGTTTCAAGGTCTCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: REGLAEKTLTTVSTT*DMAVFSSCFKVSAK
Trigger: TTTGGCTGAGACCTTGAAACAGGAACTGAACACTGCCATGTCGCAAGTTGTGGACACTGTGGTCAAAGTCTTTTCGGCCAAGCCCTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 90 bp CTGTCCCTACCGTCCTTTTCACTCCAATGTCAACTCTTCTCCTCTTaGTTTGCCGGCTTAAGAGGGCTGTGCTGTCATGGTCAGGCATCA +
Preference number: 5 (lower is better)
Translates to: LSLPSFSLQCQLFSS*FAGLRGLCCHGQAS
Trigger: TGATGCCTGACCATGACAGCACAGCCCTCTTAAGCCGGCAAACCAAGAGGAGAAGAGTTGACATTGGAGTGAAAAGGACGGTAGGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS GCA 90 bp CAATGTCAACTCTTCTCCTCTTGGTTTGCCGGCTTAAGAGGGCTGTaGTGTCATGGTCAGGCATCACTGGACGGTTATTGTGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: QCQLFSSWFAGLRGL*CHGQASLDGYCAIF
Trigger: GAAGATGGCACAATAACCGTCCAGTGATGCCTGACCATGACAGCACAGCCCTCTTAAGCCGGCAAACCAAGAGGAGAAGAGTTGACATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS GCA 90 bp AAGGCATCATGGCATCTTCATACGAGTTCGCCCTCTTCAGCAGCTTaGGGAGTACATTTGACTTTTCCCCATCTGCATGCTGCACCACTG +
Preference number: 5 (lower is better)
Translates to: KASWHLHTSSPSSAA*GVHLTFPHLHAAPL
Trigger: CAGTGGTGCAGCATGCAGATGGGGAAAAGTCAAATGTACTCCGCAAGCTGCTGAAGAGGGCGAACTCGTATGAAGATGCCATGATGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS GCA 90 bp TCTTTGTTGTTGCCTTCTCGCTTCGGCTTGTTTTCAGCCATTTCCTaGTCTCTGATCAGGGCTCGAGCTCGGTCAATAAACTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SLLLPSRFGLFSAIS*SLIRARARSINCPG
Trigger: CCCAGGACAGTTTATTGACCGAGCTCGAGCCCTGATCAGAGAGCAGGAAATGGCTGAAAACAAGCCGAAGCGAGAAGGCAACAACAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 90 bp ACTCTTCTCCTCTTGGTTTGCCGGCTTAAGAGGGCTGTGCTGTCATaGTCAGGCATCACTGGACGGTTATTGTGCCATCTTCAAAAGCTC +
Preference number: 5 (lower is better)
Translates to: TLLLLVCRLKRAVLS*SGITGRLLCHLQKL
Trigger: GAGCTTTTGAAGATGGCACAATAACCGTCCAGTGATGCCTGACCATGACAGCACAGCCCTCTTAAGCCGGCAAACCAAGAGGAGAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS-3UTR CAA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCAGAGAGACCGCTGGCTaGGAAACTGGGCTCCGTGCC +
Preference number: 5 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGRETAG*ETGLRA
Trigger: GGCACGGAGCCCAGTTTCCAAGCCAGCGGTCTCTCT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCAGAGAGACCGCTGGCTaGGAAACTGGGCTCCGTGCC +
Preference number: 5 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVRETAG*ETGLRA
Trigger: GGCACGGAGCCCAGTTTCCAAGCCAGCGGTCTCTCT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTTCTCTTTCTTTGTTGTaGCCTTCTCGCTTCGGCTTG +
Preference number: 5 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPSLSLL*PSRFGL
Trigger: CAAGCCGAAGCGAGAAGGCAACAACAAAGAAAGAGA...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTCCATGGTCTCTTTCTTaGTTGTTGCCTTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPPWSLS*LLPSRF
Trigger: GAAGCGAGAAGGCAACAACAAAGAAAGAGACCATGG...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTTTGGCCGAAAAGACTTaGACCACAGTGTCCACAACT +
Preference number: 5 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPLAEKT*TTVSTT
Trigger: AGTTGTGGACACTGTGGTCAAAGTCTTTTCGGCCAA...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACAACCCGGGCGCGCTTaGCTCTCAGGTGCTCATCAC +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKQPGRA*LSGAHH
Trigger: GTGATGAGCACCTGAGAGCAAAGCGCGCCCGGGTTG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCCACTGCAGGCGCTGGTaGGCGGTGTGGAAATTGTGG +
Preference number: 5 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGHCRRW*AVWKLW
Trigger: CCACAATTTCCACACCGCCAACCAGCGCCTGCAGTG...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTGAGGTAATGCATCTGTaGAACTTTACGTCGGAGAAG +
Preference number: 5 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPEVMHL*NFTSEK
Trigger: CTTCTCCGACGTAAAGTTCAACAGATGCATTACCTC...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTCTTTTCTGCTTATGTTaGTGCATTCTGAGGGGGTGT +
Preference number: 5 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPLFCLC*CILRGC
Trigger: ACACCCCCTCAGAATGCACAAACATAAGCAGAAAAG...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS GCA 90 bp ATACCCCGAATTATATTCTCAACCCGGGCGCGCTTTGCTCTCAGGTaGTCATCACATAAGCGATCCATATCAAACTGGCTCATAGTAGGC +
Preference number: 5 (lower is better)
Translates to: IPRIIFSTRARFALR*SSHKRSISNWLIVG
Trigger: GCCTACTATGAGCCAGTTTGATATGGATCGCTTATGTGATGAGCACCTGAGAGCAAAGCGCGCCCGGGTTGAGAATATAATTCGGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAACCTGGCGGGAGGGCTaGGCCGAAAAGACTTTGACC +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKTWREG*AEKTLT
Trigger: GGTCAAAGTCTTTTCGGCCAAGCCCTCCCGCCAGGT...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACACTGCAGGCGCTGGTaGGCGGTGTGGAAATTGTGG +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKHCRRW*AVWKLW
Trigger: CCACAATTTCCACACCGCCAACCAGCGCCTGCAGTG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCCCGGCGAGAGCTCTTTaGCGCCGCTCTGCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFPARAL*RRSAFP
Trigger: GGGGAAAGCAGAGCGGCGCAAAAGAGCTCTCGCCGG...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS CCA 90 bp TTTTCAACAGCTGGGAAATTATGGTTGCTCCTGGAAAAGGCATCATaGCATCTTCATACGAGTTCGCCCTCTTCAGCAGCTTGCGGAGTA +
Preference number: 5 (lower is better)
Translates to: FSTAGKLWLLLEKAS*HLHTSSPSSAACGV
Trigger: TACTCCGCAAGCTGCTGAAGAGGGCGAACTCGTATGAAGATGCCATGATGCCTTTTCCAGGAGCAACCATAATTTCCCAGCTGTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCAGAGAGACCGCTGGCTaGGAAACTGGGCTCCGTGCC +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFRETAG*ETGLRA
Trigger: GGCACGGAGCCCAGTTTCCAAGCCAGCGGTCTCTCT...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCCAACCCGGGCGCGCTTaGCTCTCAGGTGCTCATCAC +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFQPGRA*LSGAHH
Trigger: GTGATGAGCACCTGAGAGCAAAGCGCGCCCGGGTTG...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTCAACCCGGGCGCGCTTaGCTCTCAGGTGCTCATCAC +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIQPGRA*LSGAHH
Trigger: GTGATGAGCACCTGAGAGCAAAGCGCGCCCGGGTTG...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCACAGTGTCCACAACTaGCGACATGGCAGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANHSVHN*RHGSVQ
Trigger: CTGAACACTGCCATGTCGCAAGTTGTGGACACTGTG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCTGGTCAGAGGAGTTTTaGCGGACAACCAGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVWSEEF*RTTRGS
Trigger: ACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACCA...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCCCATCGTTGATGGCTaGACGTGCGTACTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANPIVDG*TCVLLH
Trigger: ATGGAGAAGTACGCACGTCAAGCCATCAACGATGGG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CACGGAACAGCAAAAACCCAGTGGCACACTGACACGAACAAGGACTGCCATCCTTGGTTTTGTGCAAAATaGCTTTGCCTCCAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: HGTAKTQWHTDTNKDCHPWFCAK*LCLQKK
Trigger: TTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCA...AGGATGGCAGTCCTTGTTCGTGTCAGTGTGCCACTGGGTTTTTGCTGTTCCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS GCA 90 bp ACATGGCAGTGTTCAGTTCCTGTTTCAAGGTCTCAGCCAAATGTTTaGCTTCCGGTTGTAAGGAGTTTGGCCCATGGTCTCTTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: TWQCSVPVSRSQPNV*LPVVRSLAHGLFLC
Trigger: ACAAAGAAAGAGACCATGGGCCAAACTCCTTACAACCGGAAGGCAAACATTTGGCTGAGACCTTGAAACAGGAACTGAACACTGCCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCCCTTCTCGCTTCGGCTaGTTTTCAGCCATTTCCTGC +
Preference number: 5 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGPSRFG*FSAISC
Trigger: GCAGGAAATGGCTGAAAACAAGCCGAAGCGAGAAGG...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAACCTGGCGGGAGGGCTaGGCCGAAAAGACTTTGACC +
Preference number: 5 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRTWREG*AEKTLT
Trigger: GGTCAAAGTCTTTTCGGCCAAGCCCTCCCGCCAGGT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTACCTGGCGGGAGGGCTaGGCCGAAAAGACTTTGACC +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEITWREG*AEKTLT
Trigger: GGTCAAAGTCTTTTCGGCCAAGCCCTCCCGCCAGGT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCCACTGCAGGCGCTGGTaGGCGGTGTGGAAATTGTGG +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFHCRRW*AVWKLW
Trigger: CCACAATTTCCACACCGCCAACCAGCGCCTGCAGTG...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATGGTCAGAGGAGTTTTaGCGGACAACCAGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKWSEEF*RTTRGS
Trigger: ACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACCA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS GCA 90 bp TGCTGTCTTCAGACAGGTTACCATCTTCATCATTTTCCGAATCAGTaGTGTCATAGATTTGGTAGAACTTTTCCTGCAGCTGGCGCAGCT +
Preference number: 5 (lower is better)
Translates to: CCLQTGYHLHHFPNQ*CHRFGRTFPAAGAA
Trigger: AGCTGCGCCAGCTGCAGGAAAAGTTCTACCAAATCTATGACAGCACTGATTCGGAAAATGATGAAGATGGTAACCTGTCTGAAGACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATGCTTGCGGAGTACATTaGACTTTTCCCCATCTGCAT +
Preference number: 5 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANACGVH*TFPHLH
Trigger: ATGCAGATGGGGAAAAGTCAAATGTACTCCGCAAGC...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATGCTGGGAAATTATGGTaGCTCCTGGAAAAGGCATCA +
Preference number: 5 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANAGKLW*LLEKAS
Trigger: TGATGCCTTTTCCAGGAGCAACCATAATTTCCCAGC...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGCTGCTGGGGAAGCTTTaGCTTGCGTTTGTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: HLERAGFVQNCFASRRNWLLGKL*LAFVFS
Trigger: AGAGAAAACAAACGCAAGCAAAAGCTTCCCCAGCAG...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTACTGCTGGAAACTCTGTaGCTGCTGCTGGGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVLLETL*LLLGKL
Trigger: AAGCTTCCCCAGCAGCAGCAACAGAGTTTCCAGCAG...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACACTGCTGGAAACTCTGTaGCTGCTGCTGGGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTLLETL*LLLGKL
Trigger: AAGCTTCCCCAGCAGCAGCAACAGAGTTTCCAGCAG...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCCCGGTTGTAAGGAGTTaGGCCCATGGTCTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVPVVRS*AHGLFL
Trigger: AAGAAAGAGACCATGGGCCAAACTCCTTACAACCGG...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCCCGGTTGTAAGGAGTTaGGCCCATGGTCTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGPVVRS*AHGLFL
Trigger: AAGAAAGAGACCATGGGCCAAACTCCTTACAACCGG...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCGTCTCAGCCAAATGTTaGCCTTCCGGTTGTAAGGAG +
Preference number: 5 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGVSAKC*PSGCKE
Trigger: CTCCTTACAACCGGAAGGCAAACATTTGGCTGAGAC...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAACCTGGCGGGAGGGCTaGGCCGAAAAGACTTTGACC +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLTWREG*AEKTLT
Trigger: GGTCAAAGTCTTTTCGGCCAAGCCCTCCCGCCAGGT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCTTGTGGTTTTCCCCATaGACTGCAAATCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVLWFSP*TANLAW
Trigger: CCAGGCCAGATTTGCAGTCAATGGGGAAAACCACAA...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATAGCTTGCAGATGACCTaGTATATGGCCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANSLQMT*YMAFFQ
Trigger: CTGGAAGAAGGCCATATACAAGGTCATCTGCAAGCT...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGAGCTTGCAGATGACCTaGTATATGGCCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: HLERAGFVQNCFASRRNWSLQMT*YMAFFQ
Trigger: CTGGAAGAAGGCCATATACAAGGTCATCTGCAAGCT...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGATCACTGGACGGTTATaGTGCCATCTTCAAAAGCTC +
Preference number: 5 (lower is better)
Translates to: HLERAGFVQNCFASRRNWITGRL*CHLQKL
Trigger: GAGCTTTTGAAGATGGCACAATAACCGTCCAGTGAT...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATATCACTGGACGGTTATaGTGCCATCTTCAAAAGCTC +
Preference number: 5 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANITGRL*CHLQKL
Trigger: GAGCTTTTGAAGATGGCACAATAACCGTCCAGTGAT...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCATCCTGCTCAGAACCTaGGGGATTCATGGCACTAAA +
Preference number: 5 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGILLRT*GIHGTK
Trigger: TTTAGTGCCATGAATCCCCAAGGTTCTGAGCAGGAT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTCTGCTGGAAACTCTGTaGCTGCTGCTGGGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEILLETL*LLLGKL
Trigger: AAGCTTCCCCAGCAGCAGCAACAGAGTTTCCAGCAG...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACTGCTGGAAACTCTGTaGCTGCTGCTGGGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRLLETL*LLLGKL
Trigger: AAGCTTCCCCAGCAGCAGCAACAGAGTTTCCAGCAG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCTCTCTTTCTTTGTTGTaGCCTTCTCGCTTCGGCTTG +
Preference number: 5 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGSLSLL*PSRFGL
Trigger: CAAGCCGAAGCGAGAAGGCAACAACAAAGAAAGAGA...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGATGGTCAGAGGAGTTTTaGCGGACAACCAGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRWSEEF*RTTRGS
Trigger: ACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACCA...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCACAATCCTTCCTGCATaGCACTTCCCGAATAAGGTG +
Preference number: 5 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVTILPA*HFPNKV
Trigger: CACCTTATTCGGGAAGTGCAATGCAGGAAGGATTGT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACACCCATCGTTGATGGCTaGACGTGCGTACTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTPIVDG*TCVLLH
Trigger: ATGGAGAAGTACGCACGTCAAGCCATCAACGATGGG...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCAGGCAGTTCGGGGATTaGAAAATCTCAGGGACTTCA +
Preference number: 5 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVRQFGD*KISGTS
Trigger: TGAAGTCCCTGAGATTTTCAAATCCCCGAACTGCCT...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGAGGGGGTGTCAGATTaGAGAGAAGGCTCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKEGVSD*REGSVE
Trigger: TTCAACTGAGCCTTCTCTCAAATCTGACACCCCCTC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS TCA 90 bp TCTTTGCCTGCGATAATGGCATTGAAAAACTCCCGTAATGTGATCTaGGCAACTTCCAGGAATCTCTCTGGAACCTCAAAGTCATTTGCT +
Preference number: 5 (lower is better)
Translates to: SLPAIMALKNSRNVI*ATSRNLSGTSKSFA
Trigger: AGCAAATGACTTTGAGGTTCCAGAGAGATTCCTGGAAGTTGCTCAGATCACATTACGGGAGTTTTTCAATGCCATTATCGCAGGCAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGCTGGGAAATTATGGTaGCTCCTGGAAAAGGCATCA +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKAGKLW*LLEKAS
Trigger: TGATGCCTTTTCCAGGAGCAACCATAATTTCCCAGC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATAGTGCTGTCATAGATTaGGTAGAACTTTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANSAVID*VELFLQ
Trigger: CTGCAGGAAAAGTTCTACCAAATCTATGACAGCACT...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATCTCTTTCTTTGTTGTaGCCTTCTCGCTTCGGCTTG +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKSLSLL*PSRFGL
Trigger: CAAGCCGAAGCGAGAAGGCAACAACAAAGAAAGAGA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACCATGGTCTCTTTCTTaGTTGTTGCCTTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKPWSLS*LLPSRF
Trigger: GAAGCGAGAAGGCAACAACAAAGAAAGAGACCATGG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTCACAGTGTCCACAACTaGCGACATGGCAGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIHSVHN*RHGSVQ
Trigger: CTGAACACTGCCATGTCGCAAGTTGTGGACACTGTG...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCCACAGTGTCCACAACTaGCGACATGGCAGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFHSVHN*RHGSVQ
Trigger: CTGAACACTGCCATGTCGCAAGTTGTGGACACTGTG...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATTGGCCGAAAAGACTTaGACCACAGTGTCCACAACT +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKLAEKT*TTVSTT
Trigger: AGTTGTGGACACTGTGGTCAAAGTCTTTTCGGCCAA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAACAATCCTTCCTGCATaGCACTTCCCGAATAAGGTG +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKTILPA*HFPNKV
Trigger: CACCTTATTCGGGAAGTGCAATGCAGGAAGGATTGT...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGAAGGATCAACATCTTaGCCTGCGATAATGGCATTG +
Preference number: 5 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVEGSTS*PAIMAL
Trigger: CAATGCCATTATCGCAGGCAAAGATGTTGATCCTTC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCCTAGACACATATAACTaGGACATCCAAAGGGGACTG +
Preference number: 5 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVLDTYN*DIQRGL
Trigger: CAGTCCCCTTTGGATGTCCAAGTTATATGTGTCTAG...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGTTGTGCAAAATTGCTTaGCCTCCAGAAGAAACTGGT +
Preference number: 5 (lower is better)
Translates to: HLERAGFVQNCFASRRNWLCKIA*PPEETG
Trigger: ACCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAA...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGTTGAGAGAGCTGGTTTaGTGCAAAATTGCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: HLERAGFVQNCFASRRNWLRELV*CKIALP
Trigger: AGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAA...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATATTTCTAGTCTCATCTaGAGAGAGCTGGTTTTGTGC +
Preference number: 5 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANISSLI*RELVLC
Trigger: GCACAAAACCAGCTCTCTCAAGATGAGACTAGAAAT...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAGAGGGGGTGTCAGATTaGAGAGAAGGCTCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTEGVSD*REGSVE
Trigger: TTCAACTGAGCCTTCTCTCAAATCTGACACCCCCTC...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGAGGGGGTGTCAGATTaGAGAGAAGGCTCAGTTGAA +
Preference number: 5 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVEGVSD*REGSVE
Trigger: TTCAACTGAGCCTTCTCTCAAATCTGACACCCCCTC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS CCA 90 bp TTTGTTCATGTTATTTTTCAACAGCTGGGAAATTATGGTTGCTCCTaGAAAAGGCATCATGGCATCTTCATACGAGTTCGCCCTCTTCAG +
Preference number: 5 (lower is better)
Translates to: FVHVIFQQLGNYGCS*KRHHGIFIRVRPLQ
Trigger: CTGAAGAGGGCGAACTCGTATGAAGATGCCATGATGCCTTTTCCAGGAGCAACCATAATTTCCCAGCTGTTGAAAAATAACATGAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS-3UTR CAA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAATCCTGCTCAGAACCTaGGGGATTCATGGCACTAAA +
Preference number: 5 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTILLRT*GIHGTK
Trigger: TTTAGTGCCATGAATCCCCAAGGTTCTGAGCAGGAT...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGCTTGCGGAGTACATTaGACTTTTCCCCATCTGCAT +
Preference number: 5 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVACGVH*TFPHLH
Trigger: ATGCAGATGGGGAAAAGTCAAATGTACTCCGCAAGC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACCTTCTCGCTTCGGCTaGTTTTCAGCCATTTCCTGC +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLPSRFG*FSAISC
Trigger: GCAGGAAATGGCTGAAAACAAGCCGAAGCGAGAAGG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTCCGGTTGTAAGGAGTTaGGCCCATGGTCTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIPVVRS*AHGLFL
Trigger: AAGAAAGAGACCATGGGCCAAACTCCTTACAACCGG...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCCCGGTTGTAAGGAGTTaGGCCCATGGTCTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFPVVRS*AHGLFL
Trigger: AAGAAAGAGACCATGGGCCAAACTCCTTACAACCGG...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGTCTCAGCCAAATGTTaGCCTTCCGGTTGTAAGGAG +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFVSAKC*PSGCKE
Trigger: CTCCTTACAACCGGAAGGCAAACATTTGGCTGAGAC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTGTCTCAGCCAAATGTTaGCCTTCCGGTTGTAAGGAG +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIVSAKC*PSGCKE
Trigger: CTCCTTACAACCGGAAGGCAAACATTTGGCTGAGAC...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACAGTGTCCACAACTaGCGACATGGCAGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLHSVHN*RHGSVQ
Trigger: CTGAACACTGCCATGTCGCAAGTTGTGGACACTGTG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTTTGTGGTTTTCCCCATaGACTGCAAATCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEILWFSP*TANLAW
Trigger: CCAGGCCAGATTTGCAGTCAATGGGGAAAACCACAA...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAACAATCCTTCCTGCATaGCACTTCCCGAATAAGGTG +
Preference number: 5 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVTILPA*HFPNKV
Trigger: CACCTTATTCGGGAAGTGCAATGCAGGAAGGATTGT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACCTGCGATAATGGCATaGAAAAACTCCCGTAATGTG +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKPAIMA*KNSRNV
Trigger: CACATTACGGGAGTTTTTCAATGCCATTATCGCAGG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGAAGGATCAACATCTTaGCCTGCGATAATGGCATTG +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKEGSTS*PAIMAL
Trigger: CAATGCCATTATCGCAGGCAAAGATGTTGATCCTTC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAAGGCAGTTCGGGGATTaGAAAATCTCAGGGACTTCA +
Preference number: 5 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTRQFGD*KISGTS
Trigger: TGAAGTCCCTGAGATTTTCAAATCCCCGAACTGCCT...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAAGGCAGTTCGGGGATTaGAAAATCTCAGGGACTTCA +
Preference number: 5 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVRQFGD*KISGTS
Trigger: TGAAGTCCCTGAGATTTTCAAATCCCCGAACTGCCT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATCACTGTCTGTAGAGTaGTGCTGTGTCATGGGTTTT +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKSLSVE*CCVMGF
Trigger: AAAACCCATGACACAGCACAACTCTACAGACAGTGA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCTGGAGAGACAGGCTTTaGTCATTTTCCAATGCACTT +
Preference number: 5 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVWRDRL*SFSNAL
Trigger: AAGTGCATTGGAAAATGACAAAAGCCTGTCTCTCCA...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATCCTACTGTCCTACAATaGGATACAGGTCCAAAAATT +
Preference number: 5 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANPTVLQ*DTGPKI
Trigger: AATTTTTGGACCTGTATCCAATTGTAGGACAGTAGG...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTGCTGGGAAATTATGGTaGCTCCTGGAAAAGGCATCA +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIAGKLW*LLEKAS
Trigger: TGATGCCTTTTCCAGGAGCAACCATAATTTCCCAGC...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGCTGGGAAATTATGGTaGCTCCTGGAAAAGGCATCA +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFAGKLW*LLEKAS
Trigger: TGATGCCTTTTCCAGGAGCAACCATAATTTCCCAGC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGTCCGTGCCACCATTTTaGTTCATGTTATTTTTCAAC +
Preference number: 5 (lower is better)
Translates to: HLERAGFVQNCFASRRNWSVPPF*FMLFFN
Trigger: GTTGAAAAATAACATGAACAAAAATGGTGGCACGGA...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCCTGCTGGGGAAGCTTTaGCTTGCGTTTGTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFLLGKL*LAFVFS
Trigger: AGAGAAAACAAACGCAAGCAAAAGCTTCCCCAGCAG...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTCTCTTTCTTTGTTGTaGCCTTCTCGCTTCGGCTTG +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFSLSLL*PSRFGL
Trigger: CAAGCCGAAGCGAGAAGGCAACAACAAAGAAAGAGA...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTTTGGCCGAAAAGACTTaGACCACAGTGTCCACAACT +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEILAEKT*TTVSTT
Trigger: AGTTGTGGACACTGTGGTCAAAGTCTTTTCGGCCAA...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGATTGGCCGAAAAGACTTaGACCACAGTGTCCACAACT +
Preference number: 5 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRLAEKT*TTVSTT
Trigger: AGTTGTGGACACTGTGGTCAAAGTCTTTTCGGCCAA...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTTTGTGGTTTTCCCCATaGACTGCAAATCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFLWFSP*TANLAW
Trigger: CCAGGCCAGATTTGCAGTCAATGGGGAAAACCACAA...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTGGCGGTGTGGAAATaGTGGTTTTCCCCATTGACT +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFLAVWK*WFSPLT
Trigger: AGTCAATGGGGAAAACCACAATTTCCACACCGCCAA...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTTTGGCGGTGTGGAAATaGTGGTTTTCCCCATTGACT +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEILAVWK*WFSPLT
Trigger: AGTCAATGGGGAAAACCACAATTTCCACACCGCCAA...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATATTTCAGACATATCTaGAAGATCGCCGCACTCGGA +
Preference number: 5 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTYFRHI*KIAALG
Trigger: TCCGAGTGCGGCGATCTTCAAGATATGTCTGAAATA...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTATATTTCAGACATATCTaGAAGATCGCCGCACTCGGA +
Preference number: 5 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVYFRHI*KIAALG
Trigger: TCCGAGTGCGGCGATCTTCAAGATATGTCTGAAATA...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGAGGTAATGCATCTGTaGAACTTTACGTCGGAGAAG +
Preference number: 5 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVEVMHL*NFTSEK
Trigger: CTTCTCCGACGTAAAGTTCAACAGATGCATTACCTC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAGAGGTAATGCATCTGTaGAACTTTACGTCGGAGAAG +
Preference number: 5 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTEVMHL*NFTSEK
Trigger: CTTCTCCGACGTAAAGTTCAACAGATGCATTACCTC...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCAGCTTGCAGATGACCTaGTATATGGCCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFSLQMT*YMAFFQ
Trigger: CTGGAAGAAGGCCATATACAAGGTCATCTGCAAGCT...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAAGGCAGTTCGGGGATTaGAAAATCTCAGGGACTTCA +
Preference number: 5 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRRQFGD*KISGTS
Trigger: TGAAGTCCCTGAGATTTTCAAATCCCCGAACTGCCT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATTGAGAGAGCTGGTTTaGTGCAAAATTGCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKLRELV*CKIALP
Trigger: AGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CATCTTGAGAGAGCTGGTTTTGTGCAAAATTGCTTTGCCTCCAGAAGAAACTGGAACTGTGACTACAAGTaGGGATTACTTCCCTATTTT +
Preference number: 5 (lower is better)
Translates to: HLERAGFVQNCFASRRNWNCDYK*GLLPYF
Trigger: AAAATAGGGAAGTAATCCCAACTTGTAGTCACAGTT...CCAGTTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCAGCTCTCTCAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAAGTCTGGAATCAATATaGAACTCGCCCCAGATCAAA +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKSLESI*NSPQIK
Trigger: TTTGATCTGGGGCGAGTTCAATATTGATTCCAGACT...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAAGAAACTGCATTACCCTaGCCCTTGACATCTGATAAA +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKETALP*PLTSDK
Trigger: TTTATCAGATGTCAAGGGCAAGGGTAATGCAGTTTC...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CCTCATCCTTCACCATCCCACCATAGAAAGTTAACTTTCTCCCAAGTAGCCAATAGAAAATCTCCATACTaGACATTACTGGCACAACTA +
Preference number: 5 (lower is better)
Translates to: PHPSPSHHRKLTFSQVANRKSPY*TLLAQL
Trigger: TAGTTGTGCCAGTAATGTCAAGTATGGAGATTTTCT...ATTGGCTACTTGGGAGAAAGTTAACTTTCTATGGTGGGATGGTGAAGGATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAATCACTGGACGGTTATaGTGCCATCTTCAAAAGCTC +
Preference number: 5 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRITGRL*CHLQKL
Trigger: GAGCTTTTGAAGATGGCACAATAACCGTCCAGTGAT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAATCCTGCTCAGAACCTaGGGGATTCATGGCACTAAA +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLILLRT*GIHGTK
Trigger: TTTAGTGCCATGAATCCCCAAGGTTCTGAGCAGGAT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGCTTGCGGAGTACATTaGACTTTTCCCCATCTGCAT +
Preference number: 5 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFACGVH*TFPHLH
Trigger: ATGCAGATGGGGAAAAGTCAAATGTACTCCGCAAGC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCTCCGTGCCACCATTTTaGTTCATGTTATTTTTCAAC +
Preference number: 5 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGSVPPF*FMLFFN
Trigger: GTTGAAAAATAACATGAACAAAAATGGTGGCACGGA...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATCTCTTTCATTTTCATaGCCCCTTAATGCCACACTG +
Preference number: 5 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTSLSFS*PLNATL
Trigger: CAGTGTGGCATTAAGGGGCAATGAAAATGAAAGAGA...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACTGCTGGGGAAGCTTTaGCTTGCGTTTGTTTTCTCT +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLLLGKL*LAFVFS
Trigger: AGAGAAAACAAACGCAAGCAAAAGCTTCCCCAGCAG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAAGTGCTGTCATAGATTaGGTAGAACTTTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVSAVID*VELFLQ
Trigger: CTGCAGGAAAAGTTCTACCAAATCTATGACAGCACT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTATTGGCGGTGTGGAAATaGTGGTTTTCCCCATTGACT +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLLAVWK*WFSPLT
Trigger: AGTCAATGGGGAAAACCACAATTTCCACACCGCCAA...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGAGGTAATGCATCTGTaGAACTTTACGTCGGAGAAG +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFEVMHL*NFTSEK
Trigger: CTTCTCCGACGTAAAGTTCAACAGATGCATTACCTC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACCTGCGATAATGGCATaGAAAAACTCCCGTAATGTG +
Preference number: 5 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRPAIMA*KNSRNV
Trigger: CACATTACGGGAGTTTTTCAATGCCATTATCGCAGG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCGAAGGATCAACATCTTaGCCTGCGATAATGGCATTG +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFEGSTS*PAIMAL
Trigger: CAATGCCATTATCGCAGGCAAAGATGTTGATCCTTC...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTGAAGGATCAACATCTTaGCCTGCGATAATGGCATTG +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIEGSTS*PAIMAL
Trigger: CAATGCCATTATCGCAGGCAAAGATGTTGATCCTTC...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAAGCTTGCAGATGACCTaGTATATGGCCTTCTTCCAG +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLSLQMT*YMAFFQ
Trigger: CTGGAAGAAGGCCATATACAAGGTCATCTGCAAGCT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAACTTCACTATCCAGCTaGCAGATGACCTTGTATATG +
Preference number: 5 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTTSLSS*QMTLYM
Trigger: CATATACAAGGTCATCTGCAAGCTGGATAGTGAAGT...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACACAAATGTTAAGGGCCTaGGGCAAAAGCAAACTAAAG +
Preference number: 5 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTQMLRA*GKSKLK
Trigger: CTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTG...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTCACTGTCTGTAGAGTaGTGCTGTGTCATGGGTTTT +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFSLSVE*CCVMGF
Trigger: AAAACCCATGACACAGCACAACTCTACAGACAGTGA...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTTCACTGTCTGTAGAGTaGTGCTGTGTCATGGGTTTT +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEISLSVE*CCVMGF
Trigger: AAAACCCATGACACAGCACAACTCTACAGACAGTGA...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAATGGTTTTGTGCAAAATaGCTTTGCCTCCAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKWFCAK*LCLQKK
Trigger: TTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCA...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAGCTTTGCCTTTTACCTaGCAAATGGCAACACAAAGT +
Preference number: 5 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVALPFT*QMATQS
Trigger: ACTTTGTGTTGCCATTTGCAAGGTAAAAGGCAAAGC...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCATGGCAAAGAGATTTTaGCACTGTCTTCACATATAC +
Preference number: 5 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGMAKRF*HCLHIY
Trigger: GTATATGTGAAGACAGTGCAAAAATCTCTTTGCCAT...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CCCTATTTTAAGTGTCCAAATGTTAAGGGCCTTGGGCAAAAGCAAACTAAAGGCTTGCAAACACAGAGTTaGTACCAGAAGGAAACATTT +
Preference number: 5 (lower is better)
Translates to: PYFKCPNVKGLGQKQTKGLQTQS*YQKETF
Trigger: AAATGTTTCCTTCTGGTACAAACTCTGTGTTTGCAA...GCCTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTGGACACTTAAAATAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCTTGCAAACACAGAGTTaGTACCAGAAGGAAACATTT +
Preference number: 5 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVLQTQS*YQKETF
Trigger: AAATGTTTCCTTCTGGTACAAACTCTGTGTTTGCAA...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACTTTTCTGCTTATGTTaGTGCATTCTGAGGGGGTGT +
Preference number: 5 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRLFCLC*CILRGC
Trigger: ACACCCCCTCAGAATGCACAAACATAAGCAGAAAAG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTCTTTTCTGCTTATGTTaGTGCATTCTGAGGGGGTGT +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEILFCLC*CILRGC
Trigger: ACACCCCCTCAGAATGCACAAACATAAGCAGAAAAG...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp ATACTTGACATTACTGGCACAACTAGCCTACTGTCCTACAATTGGATACAGGTCGGACAGGGAGTCTCATaGTGTTTATCATATCAATTA +
Preference number: 5 (lower is better)
Translates to: ILDITGTTSLLSYNWIQVGQGVS*CLSYQL
Trigger: TAATTGATATGATAAACACAATGAGACTCCCTGTCC...GACCTGTATCCAATTGTAGGACAGTAGGCTAGTTGTGCCAGTAATGTCAAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTATCACTGGACGGTTATaGTGCCATCTTCAAAAGCTC +
Preference number: 5 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFITGRL*CHLQKL
Trigger: GAGCTTTTGAAGATGGCACAATAACCGTCCAGTGAT...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTCTCTTTCATTTTCATaGCCCCTTAATGCCACACTG +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFSLSFS*PLNATL
Trigger: CAGTGTGGCATTAAGGGGCAATGAAAATGAAAGAGA...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTAGTGCTGTCATAGATTaGGTAGAACTTTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEISAVID*VELFLQ
Trigger: CTGCAGGAAAAGTTCTACCAAATCTATGACAGCACT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTATATTTCAGACATATCTaGAAGATCGCCGCACTCGGA +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLYFRHI*KIAALG
Trigger: TCCGAGTGCGGCGATCTTCAAGATATGTCTGAAATA...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACCTGCGATAATGGCATaGAAAAACTCCCGTAATGTG +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLPAIMA*KNSRNV
Trigger: CACATTACGGGAGTTTTTCAATGCCATTATCGCAGG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTACTTCACTATCCAGCTaGCAGATGACCTTGTATATG +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEITSLSS*QMTLYM
Trigger: CATATACAAGGTCATCTGCAAGCTGGATAGTGAAGT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCCAAATGTTAAGGGCCTaGGGCAAAAGCAAACTAAAG +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFQMLRA*GKSKLK
Trigger: CTTTAGTTTGCTTTTGCCCAAGGCCCTTAACATTTG...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATGGTTTTGTGCAAAATaGCTTTGCCTCCAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTWFCAK*LCLQKK
Trigger: TTTCTTCTGGAGGCAAAGCAATTTTGCACAAAACCA...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGCTTTGCCTTTTACCTaGCAAATGGCAACACAAAGT +
Preference number: 5 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRALPFT*QMATQS
Trigger: ACTTTGTGTTGCCATTTGCAAGGTAAAAGGCAAAGC...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTTGGAGAGACAGGCTTTaGTCATTTTCCAATGCACTT +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIWRDRL*SFSNAL
Trigger: AAGTGCATTGGAAAATGACAAAAGCCTGTCTCTCCA...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp AGCCAACCGCCATTTGCAATAAGTCATCAATCAAGTGGATGCATCGTTAACAAACAAAAGAAGGTAAGCTaGTTTGCCTTTTCTGCTTAT +
Preference number: 5 (lower is better)
Translates to: SQPPFAISHQSSGCIVNKQKKVS*FAFSAY
Trigger: ATAAGCAGAAAAGGCAAACAAGCTTACCTTCTTTTG...TTTGTTAACGATGCATCCACTTGATTGATGACTTATTGCAAATGGCGGTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTACACACGGTGATATCTaGCGGGTGATGAATATGATA +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEITHGDI*RVMNMI
Trigger: TATCATATTCATCACCCGCAAGATATCACCGTGTGT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAACACACGGTGATATCTaGCGGGTGATGAATATGATA +
Preference number: 5 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRTHGDI*RVMNMI
Trigger: TATCATATTCATCACCCGCAAGATATCACCGTGTGT...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATCCGTGCCACCATTTTaGTTCATGTTATTTTTCAAC +
Preference number: 5 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTSVPPF*FMLFFN
Trigger: GTTGAAAAATAACATGAACAAAAATGGTGGCACGGA...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTATCTCTTTCATTTTCATaGCCCCTTAATGCCACACTG +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLSLSFS*PLNATL
Trigger: CAGTGTGGCATTAAGGGGCAATGAAAATGAAAGAGA...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAAGTGCTGTCATAGATTaGGTAGAACTTTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLSAVID*VELFLQ
Trigger: CTGCAGGAAAAGTTCTACCAAATCTATGACAGCACT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAACTTCACTATCCAGCTaGCAGATGACCTTGTATATG +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLTSLSS*QMTLYM
Trigger: CATATACAAGGTCATCTGCAAGCTGGATAGTGAAGT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGCTTTGCCTTTTACCTaGCAAATGGCAACACAAAGT +
Preference number: 5 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFALPFT*QMATQS
Trigger: ACTTTGTGTTGCCATTTGCAAGGTAAAAGGCAAAGC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAAGTCTGGAATCAATATaGAACTCGCCCCAGATCAAA +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLSLESI*NSPQIK
Trigger: TTTGATCTGGGGCGAGTTCAATATTGATTCCAGACT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp ATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCCTGTTAAATAGGAATTaGGAGAGACAGGCTTTTGTC +
Preference number: 5 (lower is better)
Translates to: IVNKFPSLLIETLHTPTFLLNRN*ERQAFV
Trigger: GACAAAAGCCTGTCTCTCCAAATTCCTATTTAACAG...GAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACTGTTAAATAGGAATTaGGAGAGACAGGCTTTTGTC +
Preference number: 5 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRLLNRN*ERQAFV
Trigger: GACAAAAGCCTGTCTCTCCAAATTCCTATTTAACAG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGAAACTGCATTACCCTaGCCCTTGACATCTGATAAA +
Preference number: 5 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFETALP*PLTSDK
Trigger: TTTATCAGATGTCAAGGGCAAGGGTAATGCAGTTTC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTGCAAACACAGAGTTaGTACCAGAAGGAAACATTT +
Preference number: 5 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTLQTQS*YQKETF
Trigger: AAATGTTTCCTTCTGGTACAAACTCTGTGTTTGCAA...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp ACATATAACTTGGACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGACCTACTGTCCTACAATaGGATACAGGTCCAAAAATT +
Preference number: 5 (lower is better)
Translates to: TYNLDIQRGLLLFIHSKRPTVLQ*DTGPKI
Trigger: AATTTTTGGACCTGTATCCAATTGTAGGACAGTAGG...TCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTCCAAGTTATATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp AAGGAGAGAGCAGGATTTTCAAGAATGCTTTCAACTGTCTATACAGTCACTGTAAGAAAATCTCCATACTaGACATTACTGGCACAACTA +
Preference number: 5 (lower is better)
Translates to: KERAGFSRMLSTVYTVTVRKSPY*TLLAQL
Trigger: TAGTTGTGCCAGTAATGTCAAGTATGGAGATTTTCT...TACAGTGACTGTATAGACAGTTGAAAGCATTCTTGAAAATCCTGCTCTCTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp TGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACAAGAAAATCTCCATACTaGACATTACTGGCACAACTA +
Preference number: 5 (lower is better)
Translates to: CIVNKFPSLLIETLHTPTRKSPY*TLLAQL
Trigger: TAGTTGTGCCAGTAATGTCAAGTATGGAGATTTTCT...TGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTCAGGATAGTGTGGAATaGCTTGTGAAAATATATGTG +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEIQDSVE*LVKIYV
Trigger: CACATATATTTTCACAAGCAATTCCACACTATCCTG...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GACATCCAAAGGGGACTGCTACTCTTCATACATTCAAAAAGAGTTGTTGAAATTAACTGTGACTACAAGTaGGGATTACTTCCCTATTTT +
Preference number: 5 (lower is better)
Translates to: DIQRGLLLFIHSKRVVEINCDYK*GLLPYF
Trigger: AAAATAGGGAAGTAATCCCAACTTGTAGTCACAGTT...AATTTCAACAACTCTTTTTGAATGTATGAAGAGTAGCAGTCCCCTTTGGATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACCTACTGTCCTACAATaGGATACAGGTCCAAAAATT +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLPTVLQ*DTGPKI
Trigger: AATTTTTGGACCTGTATCCAATTGTAGGACAGTAGG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTTCCGTGCCACCATTTTaGTTCATGTTATTTTTCAAC +
Preference number: 5 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFSVPPF*FMLFFN
Trigger: GTTGAAAAATAACATGAACAAAAATGGTGGCACGGA...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACAGGATAGTGTGGAATaGCTTGTGAAAATATATGTG +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLQDSVE*LVKIYV
Trigger: CACATATATTTTCACAAGCAATTCCACACTATCCTG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTAATGGCAAAGAGATTTTaGCACTGTCTTCACATATAC +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLMAKRF*HCLHIY
Trigger: GTATATGTGAAGACAGTGCAAAAATCTCTTTGCCAT...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTATGGCAAAGAGATTTTaGCACTGTCTTCACATATAC +
Preference number: 5 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFMAKRF*HCLHIY
Trigger: GTATATGTGAAGACAGTGCAAAAATCTCTTTGCCAT...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp CAATCAAGTGGATGCATCGTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACAAAAGAAGGTAAGCTaGTTTGCCTTTTCTGCTTAT +
Preference number: 5 (lower is better)
Translates to: QSSGCIVNKFPSLLIETLQKKVS*FAFSAY
Trigger: ATAAGCAGAAAAGGCAAACAAGCTTACCTTCTTTTG...TAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAACGATGCATCCACTTGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS-3UTR CAA 90 bp GTTAACAAATTCCCTTCATTGCTAATAGAGACTTTACACACGCCAACATTCTTTGGACAGGGAGTCTCATaGTGTTTATCATATCAATTA +
Preference number: 5 (lower is better)
Translates to: VNKFPSLLIETLHTPTFFGQGVS*CLSYQL
Trigger: TAATTGATATGATAAACACAATGAGACTCCCTGTCC...AAAGAATGTTGGCGTGTGTAAAGTCTCTATTAGCAATGAAGGGAATTTGTTAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000498508.6
CDS CCA 72 bp GTGGTGGCAGAGAGAGGCGACTGGTGCAGGGGCTGGTaGTGGCCGCCAGCGGCAGGGCCGGAGGCAGACTGG +
Preference number: 6 (lower is better)
Translates to: VVAERGDWCRGW*WPPAAGPEADW
Trigger: CCAGTCTGCCTCCGGCCCTGCCGCTGGCGGCCACCACCAGCCCCTGCACCAGTCGCCTCTCTCTGCCACCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS GCA 72 bp ATCCCGGGACCCTCCTCCAGTGTGCCAGGGCACGTGTaGTTCCCGAGCCTCCTCCCTGACTGCGACTCGGGA +
Preference number: 6 (lower is better)
Translates to: IPGPSSSVPGHV*FPSLLPDCDSG
Trigger: TCCCGAGTCGCAGTCAGGGAGGAGGCTCGGGAAGCACACGTGCCCTGGCACACTGGAGGAGGGTCCCGGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471129.1
CDS TCA 72 bp TGTGCCAGGGCACGTGTGCTTCCCGAGCCTCCTCCCTaGCTGCGACTCGGGACCGCCGAATCCTGCGAGGAA +
Preference number: 6 (lower is better)
Translates to: CARARVLPEPPP*LRLGTAESCEE
Trigger: TTCCTCGCAGGATTCGGCGGTCCCGAGTCGCAGTCAGGGAGGAGGCTCGGGAAGCACACGTGCCCTGGCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471129.1
CDS GCA 72 bp CCAGGGCACGTGTGCTTCCCGAGCCTCCTCCCTGACTaGGACTCGGGACCGCCGAATCCTGCGAGGAATACG +
Preference number: 6 (lower is better)
Translates to: PGHVCFPSLLPD*DSGPPNPARNT
Trigger: CGTATTCCTCGCAGGATTCGGCGGTCCCGAGTCGCAGTCAGGGAGGAGGCTCGGGAAGCACACGTGCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471129.1
CDS CCA 72 bp TGGTGGTGGCCGCCAGCGGCAGGGCCGGAGGCAGACTaGTCAGAGGAGTTTTTGCGGACAACCAGGGGCAGT +
Preference number: 6 (lower is better)
Translates to: WWWPPAAGPEAD*SEEFLRTTRGS
Trigger: ACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACCAGTCTGCCTCCGGCCCTGCCGCTGGCGGCCACCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CAA 72 bp GCGGAGAGGGAGCAGGCGGACCCGGCGAGAGCTCTTTaGCGCCGCTCTGCTTTCCCCGGCTGCAATGGTGTA +
Preference number: 6 (lower is better)
Translates to: AEREQADPARAL*RRSAFPGCNGV
Trigger: TACACCATTGCAGCCGGGGAAAGCAGAGCGGCGCAAAAGAGCTCTCGCCGGGTCCGCCTGCTCCCTCTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366958.9
ENST00000498508.6
ENST00000607726.1
CDS GCA 72 bp CGGAGAGGGAGCAGGCGGACCCGGCGAGAGCTCTTTTaGGCCGCTCTGCTTTCCCCGGCTGCAATGGTGTAT +
Preference number: 6 (lower is better)
Translates to: RRGSRRTRRELF*AALLSPAAMVY
Trigger: ATACACCATTGCAGCCGGGGAAAGCAGAGCGGCGCAAAAGAGCTCTCGCCGGGTCCGCCTGCTCCCTCTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366958.9
ENST00000498508.6
ENST00000607726.1
CDS CAA 90 bp TGGCCGCCAGCGGCAGGGCCGGAGGCAGACTGGTCAGAGGAGTTTTaGCGGACAACCAGGGGCAGTGCTTCTGTCTGGTCAGTGGAACTG +
Preference number: 6 (lower is better)
Translates to: WPPAAGPEADWSEEF*RTTRGSASVWSVEL
Trigger: CAGTTCCACTGACCAGACAGAAGCACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACCAGTCTGCCTCCGGCCCTGCCGCTGGCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS GCA 72 bp CGGCAGGGCCGGAGGCAGACTGGTCAGAGGAGTTTTTaGGGACAACCAGGGGCAGTGCTTCTGTCTGGTCAG +
Preference number: 6 (lower is better)
Translates to: RQGRRQTGQRSF*GQPGAVLLSGQ
Trigger: CTGACCAGACAGAAGCACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACCAGTCTGCCTCCGGCCCTGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 72 bp AGCTCAAGAATCCCGGGACCGCGGTGCAGGGAGCAGTaGGACCGAGCCTCTCTCTCTCTCTCTCTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: SSRIPGPRCREQ*DRASLSLSLSL
Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGGCTCGGTCCCACTGCTCCCTGCACCGCGGTCCCGGGATTCTTGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS CAA 72 bp GCGGCAGGGCCGGAGGCAGACTGGTCAGAGGAGTTTTaGCGGACAACCAGGGGCAGTGCTTCTGTCTGGTCA +
Preference number: 6 (lower is better)
Translates to: AAGPEADWSEEF*RTTRGSASVWS
Trigger: TGACCAGACAGAAGCACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACCAGTCTGCCTCCGGCCCTGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CAA 90 bp AGGAGCGAAGCGGAGAGGGAGCAGGCGGACCCGGCGAGAGCTCTTTaGCGCCGCTCTGCTTTCCCCGGCTGCAATGGTGTATTATTTCAG +
Preference number: 6 (lower is better)
Translates to: RSEAEREQADPARAL*RRSAFPGCNGVLFQ
Trigger: CTGAAATAATACACCATTGCAGCCGGGGAAAGCAGAGCGGCGCAAAAGAGCTCTCGCCGGGTCCGCCTGCTCCCTCTCCGCTTCGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366958.9
ENST00000498508.6
ENST00000607726.1
CDS CCA 72 bp ATTGACTGCAAATCTGGCCTGGGGGATCTGGAGAGGTaGGAAGACCTGAGGAACCTGGCGGGAGGGCTTGGC +
Preference number: 6 (lower is better)
Translates to: IDCKSGLGDLER*EDLRNLAGGLG
Trigger: GCCAAGCCCTCCCGCCAGGTTCCTCAGGTCTTCCCACCTCTCCAGATCCCCCAGGCCAGATTTGCAGTCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CAA 90 bp GCGACTCGGGACCGCCGAATCCTGCGAGGAATACGCCTGCGTGTGTaGGAAAAGTTTCGGGTTGGGCAGGAAGGCTGGGAATCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: ATRDRRILRGIRLRV*EKFRVGQEGWESPL
Trigger: GAGAGGAGATTCCCAGCCTTCCTGCCCAACCCGAAACTTTTCCAACACACGCAGGCGTATTCCTCGCAGGATTCGGCGGTCCCGAGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471129.1
CDS GCA 72 bp GCAGGCGGACCCGGCGAGAGCTCTTTTGCGCCGCTCTaGTTTCCCCGGCTGCAATGGTGTATTATTTCAGAG +
Preference number: 6 (lower is better)
Translates to: AGGPGESSFAPL*FPRLQWCIISE
Trigger: CTCTGAAATAATACACCATTGCAGCCGGGGAAAGCAGAGCGGCGCAAAAGAGCTCTCGCCGGGTCCGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366958.9
ENST00000498508.6
ENST00000607726.1
CDS GCA 72 bp CGACTCGGGACCGCCGAATCCTGCGAGGAATACGCCTaGGTGTGTTGGAAAAGTTTCGGGTTGGGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: RLGTAESCEEYA*VCWKSFGLGRK
Trigger: CTTCCTGCCCAACCCGAAACTTTTCCAACACACGCAGGCGTATTCCTCGCAGGATTCGGCGGTCCCGAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471129.1
CDS TCA 72 bp CAGACATATCTTGAAGATCGCCGCACTCGGACTTTATaGGCGACAAGGAGAGCCCTTCGGCGGTGCTGGGCG +
Preference number: 6 (lower is better)
Translates to: QTYLEDRRTRTL*ATRRALRRCWA
Trigger: CGCCCAGCACCGCCGAAGGGCTCTCCTTGTCGCTCATAAAGTCCGAGTGCGGCGATCTTCAAGATATGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 72 bp TCGCACATCTCATTATCTGACCTTCCGACAGAGTCCTaGGCCCTGGCATCCAGGATCTCCGAGCGCATGCTG +
Preference number: 6 (lower is better)
Translates to: SHISLSDLPTES*ALASRISERML
Trigger: CAGCATGCGCTCGGAGATCCTGGATGCCAGGGCCCAGGACTCTGTCGGAAGGTCAGATAATGAGATGTGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 72 bp CAACCAGGGGCAGTGCTTCTGTCTGGTCAGTGGAACTaGCCATCTGCACATTGCCAAAGGTGTCCAGGGGGT +
Preference number: 6 (lower is better)
Translates to: QPGAVLLSGQWN*PSAHCQRCPGG
Trigger: ACCCCCTGGACACCTTTGGCAATGTGCAGATGGCCAGTTCCACTGACCAGACAGAAGCACTGCCCCTGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 72 bp GGACGGTTATTGTGCCATCTTCAAAAGCTCGTCAGCTaGGCACAGCTCAAGAATCCCGGGACCGCGGTGCAG +
Preference number: 6 (lower is better)
Translates to: GRLLCHLQKLVS*AQLKNPGTAVQ
Trigger: CTGCACCGCGGTCCCGGGATTCTTGAGCTGTGCCCAGCTGACGAGCTTTTGAAGATGGCACAATAACCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366958.9
ENST00000498508.6
CDS CAA 72 bp GACCGCCGAATCCTGCGAGGAATACGCCTGCGTGTGTaGGAAAAGTTTCGGGTTGGGCAGGAAGGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: DRRILRGIRLRV*EKFRVGQEGWE
Trigger: TTCCCAGCCTTCCTGCCCAACCCGAAACTTTTCCAACACACGCAGGCGTATTCCTCGCAGGATTCGGCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471129.1
CDS TCA 72 bp CTGTCGGCGCTCCTCTCGCTTCTGTTCTTTTCGGGCTaGAACCAGCTGCTGGAAACTCTGTTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LSALLSLLFFSG*NQLLETLLLLL
Trigger: CAGCAGCAGCAACAGAGTTTCCAGCAGCTGGTTTCAGCCCGAAAAGAACAGAAGCGAGAGGAGCGCCGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS TCA 72 bp GAGGAACCTGGCGGGAGGGCTTGGCCGAAAAGACTTTaGCCACAGTGTCCACAACTTGCGACATGGCAGTGT +
Preference number: 6 (lower is better)
Translates to: EEPGGRAWPKRL*PQCPQLATWQC
Trigger: ACACTGCCATGTCGCAAGTTGTGGACACTGTGGTCAAAGTCTTTTCGGCCAAGCCCTCCCGCCAGGTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS GCA 72 bp TCCAGGGGGTTCGGAATGATGACGTCGCCAAAGCACTaGAGGCGCTGGTTGGCGGTGTGGAAATTGTGGTTT +
Preference number: 6 (lower is better)
Translates to: SRGFGMMTSPKH*RRWLAVWKLWF
Trigger: AAACCACAATTTCCACACCGCCAACCAGCGCCTGCAGTGCTTTGGCGACGTCATCATTCCGAACCCCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS GCA 72 bp GGCAGTGCTTCTGTCTGGTCAGTGGAACTGGCCATCTaGACATTGCCAAAGGTGTCCAGGGGGTTCGGAATG +
Preference number: 6 (lower is better)
Translates to: GSASVWSVELAI*TLPKVSRGFGM
Trigger: CATTCCGAACCCCCTGGACACCTTTGGCAATGTGCAGATGGCCAGTTCCACTGACCAGACAGAAGCACTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS GCA 72 bp CTGGTCAGAGGAGTTTTTGCGGACAACCAGGGGCAGTaGTTCTGTCTGGTCAGTGGAACTGGCCATCTGCAC +
Preference number: 6 (lower is better)
Translates to: LVRGVFADNQGQ*FCLVSGTGHLH
Trigger: GTGCAGATGGCCAGTTCCACTGACCAGACAGAAGCACTGCCCCTGGTTGTCCGCAAAAACTCCTCTGACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS GCA 72 bp GCGAGAGCTCTTTTGCGCCGCTCTGCTTTCCCCGGCTaGAATGGTGTATTATTTCAGAGCGCTCCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: ARALLRRSAFPG*NGVLFQSAPSA
Trigger: AGCTGAGGGAGCGCTCTGAAATAATACACCATTGCAGCCGGGGAAAGCAGAGCGGCGCAAAAGAGCTCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366958.9
ENST00000498508.6
ENST00000607726.1
CDS GCA 72 bp ATGAATATGATAATTGGACAAGGGACGGTGAGTCTGTaGGACAGCGAGCGAGCGAGCGGGGCGAGTGGGAGA +
Preference number: 6 (lower is better)
Translates to: MNMIIGQGTVSL*DSERASGASGR
Trigger: TCTCCCACTCGCCCCGCTCGCTCGCTCGCTGTCGCACAGACTCACCGTCCCTTGTCCAATTATCATATTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366958.9
ENST00000498508.6
ENST00000607726.1
CDS CCA 72 bp AAGCACTGCAGGCGCTGGTTGGCGGTGTGGAAATTGTaGTTTTCCCCATTGACTGCAAATCTGGCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: KHCRRWLAVWKL*FSPLTANLAWG
Trigger: CCCCCAGGCCAGATTTGCAGTCAATGGGGAAAACCACAATTTCCACACCGCCAACCAGCGCCTGCAGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 72 bp TGCGGACAACCAGGGGCAGTGCTTCTGTCTGGTCAGTaGAACTGGCCATCTGCACATTGCCAAAGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: CGQPGAVLLSGQ*NWPSAHCQRCP
Trigger: TGGACACCTTTGGCAATGTGCAGATGGCCAGTTCCACTGACCAGACAGAAGCACTGCCCCTGGTTGTCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 72 bp ACCGCCGAATCCTGCGAGGAATACGCCTGCGTGTGTTaGAAAAGTTTCGGGTTGGGCAGGAAGGCTGGGAAT +
Preference number: 6 (lower is better)
Translates to: TAESCEEYACVC*KSFGLGRKAGN
Trigger: ATTCCCAGCCTTCCTGCCCAACCCGAAACTTTTCCAACACACGCAGGCGTATTCCTCGCAGGATTCGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471129.1
CDS CCA 72 bp GGACGGTTATTGTGCCATCTTCAAAAGCTCGTCAGCTaGGCACAGCTCAAGAATCCCGGGACCCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GRLLCHLQKLVS*AQLKNPGTLLQ
Trigger: CTGGAGGAGGGTCCCGGGATTCTTGAGCTGTGCCCAGCTGACGAGCTTTTGAAGATGGCACAATAACCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471129.1
CDS CAA 72 bp CCAAAGCACTGCAGGCGCTGGTTGGCGGTGTGGAAATaGTGGTTTTCCCCATTGACTGCAAATCTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: PKHCRRWLAVWK*WFSPLTANLAW
Trigger: CCAGGCCAGATTTGCAGTCAATGGGGAAAACCACAATTTCCACACCGCCAACCAGCGCCTGCAGTGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS GCA 72 bp GTGCTGTCATGGTCAGGCATCACTGGACGGTTATTGTaGCATCTTCAAAAGCTCGTCAGCTGGGCACAGCTC +
Preference number: 6 (lower is better)
Translates to: VLSWSGITGRLL*HLQKLVSWAQL
Trigger: GAGCTGTGCCCAGCTGACGAGCTTTTGAAGATGGCACAATAACCGTCCAGTGATGCCTGACCATGACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS CCA 72 bp ACGTCGCCAAAGCACTGCAGGCGCTGGTTGGCGGTGTaGAAATTGTGGTTTTCCCCATTGACTGCAAATCTG +
Preference number: 6 (lower is better)
Translates to: TSPKHCRRWLAV*KLWFSPLTANL
Trigger: CAGATTTGCAGTCAATGGGGAAAACCACAATTTCCACACCGCCAACCAGCGCCTGCAGTGCTTTGGCGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 72 bp TTCGGAATGATGACGTCGCCAAAGCACTGCAGGCGCTaGTTGGCGGTGTGGAAATTGTGGTTTTCCCCATTG +
Preference number: 6 (lower is better)
Translates to: FGMMTSPKHCRR*LAVWKLWFSPL
Trigger: CAATGGGGAAAACCACAATTTCCACACCGCCAACCAGCGCCTGCAGTGCTTTGGCGACGTCATCATTCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 72 bp GAGTTTTTGCGGACAACCAGGGGCAGTGCTTCTGTCTaGTCAGTGGAACTGGCCATCTGCACATTGCCAAAG +
Preference number: 6 (lower is better)
Translates to: EFLRTTRGSASV*SVELAICTLPK
Trigger: CTTTGGCAATGTGCAGATGGCCAGTTCCACTGACCAGACAGAAGCACTGCCCCTGGTTGTCCGCAAAAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 72 bp TTGAATAACACCATTTTCTCGCGGTGCAGGGAGCAGTaGGACCGAGCCTCTCTCTCTCTCTCTCTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: LNNTIFSRCREQ*DRASLSLSLSL
Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGGCTCGGTCCCACTGCTCCCTGCACCGCGAGAAAATGGTGTTATTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607726.1
CDS CCA 72 bp GGACGGTTATTGTGCCATCTTCAAAAGCTCGTCAGCTaGGCACAGCTCAAGAATCCCGGGACCTCCTCCTTT +
Preference number: 6 (lower is better)
Translates to: GRLLCHLQKLVS*AQLKNPGTSSF
Trigger: AAAGGAGGAGGTCCCGGGATTCTTGAGCTGTGCCCAGCTGACGAGCTTTTGAAGATGGCACAATAACCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607425.1
CDS CAA 72 bp GCTGTGCTGTCATGGTCAGGCATCACTGGACGGTTATaGTGCCATCTTCAAAAGCTCGTCAGCTGGGCACAG +
Preference number: 6 (lower is better)
Translates to: AVLSWSGITGRL*CHLQKLVSWAQ
Trigger: CTGTGCCCAGCTGACGAGCTTTTGAAGATGGCACAATAACCGTCCAGTGATGCCTGACCATGACAGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS CAA 90 bp GCTGTCCCTACCGTCCTTTTCACTCCAATGTCAACTCTTCTCCTCTaGGTTTGCCGGCTTAAGAGGGCTGTGCTGTCATGGTCAGGCATC +
Preference number: 6 (lower is better)
Translates to: AVPTVLFTPMSTLLL*VCRLKRAVLSWSGI
Trigger: GATGCCTGACCATGACAGCACAGCCCTCTTAAGCCGGCAAACCAAGAGGAGAAGAGTTGACATTGGAGTGAAAAGGACGGTAGGGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS CAA 90 bp GCGGGAGGGCTTGGCCGAAAAGACTTTGACCACAGTGTCCACAACTaGCGACATGGCAGTGTTCAGTTCCTGTTTCAAGGTCTCAGCCAA +
Preference number: 6 (lower is better)
Translates to: AGGLGRKDFDHSVHN*RHGSVQFLFQGLSQ
Trigger: TTGGCTGAGACCTTGAAACAGGAACTGAACACTGCCATGTCGCAAGTTGTGGACACTGTGGTCAAAGTCTTTTCGGCCAAGCCCTCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS GCA 72 bp CTCTTCTCCTCTTGGTTTGCCGGCTTAAGAGGGCTGTaGTGTCATGGTCAGGCATCACTGGACGGTTATTGT +
Preference number: 6 (lower is better)
Translates to: LFSSWFAGLRGL*CHGQASLDGYC
Trigger: ACAATAACCGTCCAGTGATGCCTGACCATGACAGCACAGCCCTCTTAAGCCGGCAAACCAAGAGGAGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS GCA 72 bp TCCTCTCGCTTCTGTTCTTTTCGGGCTGAAACCAGCTaGTGGAAACTCTGTTGCTGCTGCTGGGGAAGCTTT +
Preference number: 6 (lower is better)
Translates to: SSRFCSFRAETS*WKLCCCCWGSF
Trigger: AAAGCTTCCCCAGCAGCAGCAACAGAGTTTCCAGCAGCTGGTTTCAGCCCGAAAAGAACAGAAGCGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS GCA 72 bp AGTCCTGGGCCCTGGCATCCAGGATCTCCGAGCGCATaGTGTCTTCAGACAGGTTACCATCTTCATCATTTT +
Preference number: 6 (lower is better)
Translates to: SPGPWHPGSPSA*CLQTGYHLHHF
Trigger: AAAATGATGAAGATGGTAACCTGTCTGAAGACAGCATGCGCTCGGAGATCCTGGATGCCAGGGCCCAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 72 bp CTCTTGGTTTGCCGGCTTAAGAGGGCTGTGCTGTCATaGTCAGGCATCACTGGACGGTTATTGTGCCATCTT +
Preference number: 6 (lower is better)
Translates to: LLVCRLKRAVLS*SGITGRLLCHL
Trigger: AAGATGGCACAATAACCGTCCAGTGATGCCTGACCATGACAGCACAGCCCTCTTAAGCCGGCAAACCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS CCA 72 bp TGTACTTCGGAGCCTGTACTAGAGAGACCGCTGGCTTaGAAACTGGGCTCCGTGCCACCATTTTTGTTCATG +
Preference number: 6 (lower is better)
Translates to: CTSEPVLERPLA*KLGSVPPFLFM
Trigger: CATGAACAAAAATGGTGGCACGGAGCCCAGTTTCCAAGCCAGCGGTCTCTCTAGTACAGGCTCCGAAGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS CAA 90 bp CCCGGCAGAGAGAGGAAAACACGCGAGTGCACACACGGTGATATCTaGCGGGTGATGAATATGATAATTGGACAAGGGACGGTGAGTCTG +
Preference number: 6 (lower is better)
Translates to: PGRERKTRECTHGDI*RVMNMIIGQGTVSL
Trigger: CAGACTCACCGTCCCTTGTCCAATTATCATATTCATCACCCGCAAGATATCACCGTGTGTGCACTCGCGTGTTTTCCTCTCTCTGCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366958.9
ENST00000498508.6
ENST00000607726.1
CDS CAA 90 bp CTTAAGAGGGCTGTGCTGTCATGGTCAGGCATCACTGGACGGTTATaGTGCCATCTTCAAAAGCTCGTCAGCTGGGCACAGCTCAAGAAT +
Preference number: 6 (lower is better)
Translates to: LKRAVLSWSGITGRL*CHLQKLVSWAQLKN
Trigger: ATTCTTGAGCTGTGCCCAGCTGACGAGCTTTTGAAGATGGCACAATAACCGTCCAGTGATGCCTGACCATGACAGCACAGCCCTCTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS CAA 90 bp GGGAATGGCTCATACCCCGAATTATATTCTCAACCCGGGCGCGCTTaGCTCTCAGGTGCTCATCACATAAGCGATCCATATCAAACTGGC +
Preference number: 6 (lower is better)
Translates to: GNGSYPELYSQPGRA*LSGAHHISDPYQTG
Trigger: GCCAGTTTGATATGGATCGCTTATGTGATGAGCACCTGAGAGCAAAGCGCGCCCGGGTTGAGAATATAATTCGGGGTATGAGCCATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
CDS TCA 72 bp GGGCTGTCTCTTGAAGAGTTGCTGCATATATCCTCCTaGTGTACTTCGGAGCCTGTACTAGAGAGACCGCTG +
Preference number: 6 (lower is better)
Translates to: GLSLEELLHISS*CTSEPVLERPL
Trigger: CAGCGGTCTCTCTAGTACAGGCTCCGAAGTACATCAGGAGGATATATGCAGCAACTCTTCAAGAGACAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS GCA 72 bp CTTTTCACTCCAATGTCAACTCTTCTCCTCTTGGTTTaGCGGCTTAAGAGGGCTGTGCTGTCATGGTCAGGC +
Preference number: 6 (lower is better)
Translates to: LFTPMSTLLLLV*RLKRAVLSWSG
Trigger: GCCTGACCATGACAGCACAGCCCTCTTAAGCCGGCAAACCAAGAGGAGAAGAGTTGACATTGGAGTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS CCA 72 bp CCGTCCTTTTCACTCCAATGTCAACTCTTCTCCTCTTaGTTTGCCGGCTTAAGAGGGCTGTGCTGTCATGGT +
Preference number: 6 (lower is better)
Translates to: PSFSLQCQLFSS*FAGLRGLCCHG
Trigger: ACCATGACAGCACAGCCCTCTTAAGCCGGCAAACCAAGAGGAGAAGAGTTGACATTGGAGTGAAAAGGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS CAA 72 bp ACCGTCCTTTTCACTCCAATGTCAACTCTTCTCCTCTaGGTTTGCCGGCTTAAGAGGGCTGTGCTGTCATGG +
Preference number: 6 (lower is better)
Translates to: TVLFTPMSTLLL*VCRLKRAVLSW
Trigger: CCATGACAGCACAGCCCTCTTAAGCCGGCAAACCAAGAGGAGAAGAGTTGACATTGGAGTGAAAAGGACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS CAA 72 bp ACGAGTTCGCCCTCTTCAGCAGCTTGCGGAGTACATTaGACTTTTCCCCATCTGCATGCTGCACCACTGAAT +
Preference number: 6 (lower is better)
Translates to: TSSPSSAACGVH*TFPHLHAAPLN
Trigger: ATTCAGTGGTGCAGCATGCAGATGGGGAAAAGTCAAATGTACTCCGCAAGCTGCTGAAGAGGGCGAACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS CAA 72 bp ATGTACTTCGGAGCCTGTACTAGAGAGACCGCTGGCTaGGAAACTGGGCTCCGTGCCACCATTTTTGTTCAT +
Preference number: 6 (lower is better)
Translates to: MYFGACTRETAG*ETGLRATIFVH
Trigger: ATGAACAAAAATGGTGGCACGGAGCCCAGTTTCCAAGCCAGCGGTCTCTCTAGTACAGGCTCCGAAGTACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS CAA 90 bp CCTTCCGGTTGTAAGGAGTTTGGCCCATGGTCTCTTTCTTTGTTGTaGCCTTCTCGCTTCGGCTTGTTTTCAGCCATTTCCTGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: PSGCKEFGPWSLSLL*PSRFGLFSAISCSL
Trigger: CAGAGAGCAGGAAATGGCTGAAAACAAGCCGAAGCGAGAAGGCAACAACAAAGAAAGAGACCATGGGCCAAACTCCTTACAACCGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS GCA 72 bp TGGCATCTTCATACGAGTTCGCCCTCTTCAGCAGCTTaGGGAGTACATTTGACTTTTCCCCATCTGCATGCT +
Preference number: 6 (lower is better)
Translates to: WHLHTSSPSSAA*GVHLTFPHLHA
Trigger: AGCATGCAGATGGGGAAAAGTCAAATGTACTCCGCAAGCTGCTGAAGAGGGCGAACTCGTATGAAGATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS CAA 72 bp TCCGGTTGTAAGGAGTTTGGCCCATGGTCTCTTTCTTaGTTGTTGCCTTCTCGCTTCGGCTTGTTTTCAGCC +
Preference number: 6 (lower is better)
Translates to: SGCKEFGPWSLS*LLPSRFGLFSA
Trigger: GGCTGAAAACAAGCCGAAGCGAGAAGGCAACAACAAAGAAAGAGACCATGGGCCAAACTCCTTACAACCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CAA 90 bp TTGCCTTCCGGTTGTAAGGAGTTTGGCCCATGGTCTCTTTCTTTGTaGTTGCCTTCTCGCTTCGGCTTGTTTTCAGCCATTTCCTGCTCT +
Preference number: 6 (lower is better)
Translates to: LPSGCKEFGPWSLSL*LPSRFGLFSAISCS
Trigger: AGAGCAGGAAATGGCTGAAAACAAGCCGAAGCGAGAAGGCAACAACAAAGAAAGAGACCATGGGCCAAACTCCTTACAACCGGAAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CAA 90 bp TGTTTGCCTTCCGGTTGTAAGGAGTTTGGCCCATGGTCTCTTTCTTaGTTGTTGCCTTCTCGCTTCGGCTTGTTTTCAGCCATTTCCTGC +
Preference number: 6 (lower is better)
Translates to: CLPSGCKEFGPWSLS*LLPSRFGLFSAISC
Trigger: GCAGGAAATGGCTGAAAACAAGCCGAAGCGAGAAGGCAACAACAAAGAAAGAGACCATGGGCCAAACTCCTTACAACCGGAAGGCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CAA 90 bp GTTTCAAGGTCTCAGCCAAATGTTTGCCTTCCGGTTGTAAGGAGTTaGGCCCATGGTCTCTTTCTTTGTTGTTGCCTTCTCGCTTCGGCT +
Preference number: 6 (lower is better)
Translates to: VSRSQPNVCLPVVRS*AHGLFLCCCLLASA
Trigger: AGCCGAAGCGAGAAGGCAACAACAAAGAAAGAGACCATGGGCCAAACTCCTTACAACCGGAAGGCAAACATTTGGCTGAGACCTTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS TCA 72 bp CGGCAGAGAGAGGAAAACACGCGAGTGCACACACGGTaGTATCTTGCGGGTGATGAATATGATAATTGGACA +
Preference number: 6 (lower is better)
Translates to: RQREENTRVHTR*YLAGDEYDNWT
Trigger: TGTCCAATTATCATATTCATCACCCGCAAGATATCACCGTGTGTGCACTCGCGTGTTTTCCTCTCTCTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366958.9
ENST00000498508.6
ENST00000607726.1
CDS GCA 72 bp ATTATATTCTCAACCCGGGCGCGCTTTGCTCTCAGGTaGTCATCACATAAGCGATCCATATCAAACTGGCTC +
Preference number: 6 (lower is better)
Translates to: IIFSTRARFALR*SSHKRSISNWL
Trigger: GAGCCAGTTTGATATGGATCGCTTATGTGATGAGCACCTGAGAGCAAAGCGCGCCCGGGTTGAGAATATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
CDS GCA 72 bp TTGGCCGAAAAGACTTTGACCACAGTGTCCACAACTTaGGACATGGCAGTGTTCAGTTCCTGTTTCAAGGTC +
Preference number: 6 (lower is better)
Translates to: LAEKTLTTVSTT*DMAVFSSCFKV
Trigger: GACCTTGAAACAGGAACTGAACACTGCCATGTCGCAAGTTGTGGACACTGTGGTCAAAGTCTTTTCGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 72 bp CTCAGGTGCTCATCACATAAGCGATCCATATCAAACTaGCTCATAGTAGGCCTGCCAAAAGGGGAAAGACAC +
Preference number: 6 (lower is better)
Translates to: LRCSSHKRSISN*LIVGLPKGERH
Trigger: GTGTCTTTCCCCTTTTGGCAGGCCTACTATGAGCCAGTTTGATATGGATCGCTTATGTGATGAGCACCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
CDS CAA 72 bp TCATACCCCGAATTATATTCTCAACCCGGGCGCGCTTaGCTCTCAGGTGCTCATCACATAAGCGATCCATAT +
Preference number: 6 (lower is better)
Translates to: SYPELYSQPGRA*LSGAHHISDPY
Trigger: ATATGGATCGCTTATGTGATGAGCACCTGAGAGCAAAGCGCGCCCGGGTTGAGAATATAATTCGGGGTATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
CDS CAA 72 bp GTGTTCAGTTCCTGTTTCAAGGTCTCAGCCAAATGTTaGCCTTCCGGTTGTAAGGAGTTTGGCCCATGGTCT +
Preference number: 6 (lower is better)
Translates to: VFSSCFKVSAKC*PSGCKEFGPWS
Trigger: AGACCATGGGCCAAACTCCTTACAACCGGAAGGCAAACATTTGGCTGAGACCTTGAAACAGGAACTGAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CAA 72 bp CTTGGCCGAAAAGACTTTGACCACAGTGTCCACAACTaGCGACATGGCAGTGTTCAGTTCCTGTTTCAAGGT +
Preference number: 6 (lower is better)
Translates to: LGRKDFDHSVHN*RHGSVQFLFQG
Trigger: ACCTTGAAACAGGAACTGAACACTGCCATGTCGCAAGTTGTGGACACTGTGGTCAAAGTCTTTTCGGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CAA 72 bp GAGAGGAAAACACGCGAGTGCACACACGGTGATATCTaGCGGGTGATGAATATGATAATTGGACAAGGGACG +
Preference number: 6 (lower is better)
Translates to: ERKTRECTHGDI*RVMNMIIGQGT
Trigger: CGTCCCTTGTCCAATTATCATATTCATCACCCGCAAGATATCACCGTGTGTGCACTCGCGTGTTTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366958.9
ENST00000498508.6
ENST00000607726.1
CDS CAA 90 bp CATCTTCATACGAGTTCGCCCTCTTCAGCAGCTTGCGGAGTACATTaGACTTTTCCCCATCTGCATGCTGCACCACTGAATACTCAACAT +
Preference number: 6 (lower is better)
Translates to: HLHTSSPSSAACGVH*TFPHLHAAPLNTQH
Trigger: ATGTTGAGTATTCAGTGGTGCAGCATGCAGATGGGGAAAAGTCAAATGTACTCCGCAAGCTGCTGAAGAGGGCGAACTCGTATGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS CAA 90 bp ATCCTCCTGATGTACTTCGGAGCCTGTACTAGAGAGACCGCTGGCTaGGAAACTGGGCTCCGTGCCACCATTTTTGTTCATGTTATTTTT +
Preference number: 6 (lower is better)
Translates to: ILLMYFGACTRETAG*ETGLRATIFVHVIF
Trigger: AAAAATAACATGAACAAAAATGGTGGCACGGAGCCCAGTTTCCAAGCCAGCGGTCTCTCTAGTACAGGCTCCGAAGTACATCAGGAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS CAA 90 bp GACATGGCAGTGTTCAGTTCCTGTTTCAAGGTCTCAGCCAAATGTTaGCCTTCCGGTTGTAAGGAGTTTGGCCCATGGTCTCTTTCTTTG +
Preference number: 6 (lower is better)
Translates to: DMAVFSSCFKVSAKC*PSGCKEFGPWSLSL
Trigger: CAAAGAAAGAGACCATGGGCCAAACTCCTTACAACCGGAAGGCAAACATTTGGCTGAGACCTTGAAACAGGAACTGAACACTGCCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CAA 90 bp CTAGAGAGACCGCTGGCTTGGAAACTGGGCTCCGTGCCACCATTTTaGTTCATGTTATTTTTCAACAGCTGGGAAATTATGGTTGCTCCT +
Preference number: 6 (lower is better)
Translates to: LERPLAWKLGSVPPF*FMLFFNSWEIMVAP
Trigger: AGGAGCAACCATAATTTCCCAGCTGTTGAAAAATAACATGAACAAAAATGGTGGCACGGAGCCCAGTTTCCAAGCCAGCGGTCTCTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS TCA 72 bp CTGCAATGGTGTATTATTTCAGAGCGCTCCCTCAGCTaGGGGCTCCGCTCCACAACAAGATTTACTTTAAGA +
Preference number: 6 (lower is better)
Translates to: LQWCIISERSLS*GLRSTTRFTLR
Trigger: TCTTAAAGTAAATCTTGTTGTGGAGCGGAGCCCTCAGCTGAGGGAGCGCTCTGAAATAATACACCATTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498508.6
CDS GCA 72 bp TTGCGGAGTACATTTGACTTTTCCCCATCTGCATGCTaGACCACTGAATACTCAACATCCTGCTCAGAACCT +
Preference number: 6 (lower is better)
Translates to: LRSTFDFSPSAC*TTEYSTSCSEP
Trigger: AGGTTCTGAGCAGGATGTTGAGTATTCAGTGGTGCAGCATGCAGATGGGGAAAAGTCAAATGTACTCCGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS GCA 72 bp TTCAGTACTGGTGACCCCATCGTTGATGGCTTGACGTaGGTACTTCTCCATCTGAATGTAGTAAAACTCACG +
Preference number: 6 (lower is better)
Translates to: FSTGDPIVDGLT*VLLHLNVVKLT
Trigger: CGTGAGTTTTACTACATTCAGATGGAGAAGTACGCACGTCAAGCCATCAACGATGGGGTCACCAGTACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CAA 72 bp CAGCTCTTCAGTACTGGTGACCCCATCGTTGATGGCTaGACGTGCGTACTTCTCCATCTGAATGTAGTAAAA +
Preference number: 6 (lower is better)
Translates to: QLFSTGDPIVDG*TCVLLHLNVVK
Trigger: TTTTACTACATTCAGATGGAGAAGTACGCACGTCAAGCCATCAACGATGGGGTCACCAGTACTGAAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000498508.6
CDS CCA 72 bp GTTATTTTTCAACAGCTGGGAAATTATGGTTGCTCCTaGAAAAGGCATCATGGCATCTTCATACGAGTTCGC +
Preference number: 6 (lower is better)
Translates to: VIFQQLGNYGCS*KRHHGIFIRVR
Trigger: GCGAACTCGTATGAAGATGCCATGATGCCTTTTCCAGGAGCAACCATAATTTCCCAGCTGTTGAAAAATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1
CDS GCA 72 bp GTTCATGTTATTTTTCAACAGCTGGGAAATTATGGTTaGTCCTGGAAAAGGCATCATGGCATCTTCATACGA +
Preference number: 6 (lower is better)
Translates to: VHVIFQQLGNYG*SWKRHHGIFIR
Trigger: TCGTATGAAGATGCCATGATGCCTTTTCCAGGAGCAACCATAATTTCCCAGCTGTTGAAAAATAACATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261454.8
ENST00000366958.9
ENST00000435016.2
ENST00000471129.1
ENST00000498508.6
ENST00000607425.1