RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PROSER1 (Homo sapiens)

Ensembl gene IDs: ENSG00000120685

Ensembl transcript IDs: ENST00000352251.8, ENST00000418503.1, ENST00000436678.1, ENST00000468017.1, ENST00000484434.3, ENST00000492646.1, ENST00000496138.2, ENST00000602512.1, ENST00000602534.1, ENST00000602899.1, ENST00000625998.2

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp GGATTACCCTCATTCTCATTTTCCGACTTTTGGCCAGCTTCACATTaGTCAGATTGTTCATTGCAGTTCTCAGGCAATTCTGATGTTGCT +
Preference number: 2 (lower is better)
Translates to: GLPSFSFSDFWPASH*SDCSLQFSGNSDVA
Trigger: AGCAACATCAGAATTGCCTGAGAACTGCAATGAACAATCTGACAAATGTGAAGCTGGCCAAAAGTCGGAAAATGAGAATGAGGGTAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
3UTR-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGTTCTCAGGCAATTCTaGTGTTGCTCTGAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFVLRQF*CCSEGE
Trigger: TTCTCCTTCAGAGCAACATCAGAATTGCCTGAGAAC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
3UTR-3UTR GCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTGTCAGATTGTTCATTaGAGTTCTCAGGCAATTCTG +
Preference number: 2 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFCQIVH*SSQAIL
Trigger: CAGAATTGCCTGAGAACTGCAATGAACAATCTGACA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
3UTR-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATGTCAGATTGTTCATTaGAGTTCTCAGGCAATTCTG +
Preference number: 2 (lower is better)
Translates to: FSNCCHNFSRITLILIFRCQIVH*SSQAIL
Trigger: CAGAATTGCCTGAGAACTGCAATGAACAATCTGACA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
3UTR CCA 72 bp TCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTaGCCAGCTTCACATTTGTCAGATTGTTCATTGCAG +
Preference number: 3 (lower is better)
Translates to: SPGLPSFSFSDF*PASHLSDCSLQ
Trigger: CTGCAATGAACAATCTGACAAATGTGAAGCTGGCCAAAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
3UTR-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTGGCCAGCTTCACATTaGTCAGATTGTTCATTGCAG +
Preference number: 3 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFWPASH*SDCSLQ
Trigger: CTGCAATGAACAATCTGACAAATGTGAAGCTGGCCA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
3UTR-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATGGCCAGCTTCACATTaGTCAGATTGTTCATTGCAG +
Preference number: 3 (lower is better)
Translates to: FSNCCHNFSRITLILIFRWPASH*SDCSLQ
Trigger: CTGCAATGAACAATCTGACAAATGTGAAGCTGGCCA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGCTCCGCCCGACTCCTaGATACCTCGGCCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFAPPDS*IPRPRQ
Trigger: CTGCCGGGGCCGAGGTATCCAGGAGTCGGGCGGAGC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCGGTTTCCCTGCAGCTaGGGGCCAGGTGCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFRFPCS*GPGAAR
Trigger: TCTGGCGGCACCTGGCCCTCAGCTGCAGGGAAACCG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGCGAACCCGGACGCATaGTCCGGCTCGCGCTCATCC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFANPDA*SGSRSS
Trigger: GGATGAGCGCGAGCCGGACCATGCGTCCGGGTTCGC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGCTCGGCGGCAGGTTTaGGTGCGGTTTCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFARRQV*VRFPCS
Trigger: GCTGCAGGGAAACCGCACTCAAACCTGCCGCCGAGC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGCCAGACGCCCTGCCTaGTTACCCCTACAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFARRPA*LPLQPP
Trigger: TGGGGGCTGTAGGGGTAACCAGGCAGGGCGTCTGGC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGCGAACCCGGACGCATaGTCCGGCTCGCGCTCATCC +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRANPDA*SGSRSS
Trigger: GGATGAGCGCGAGCCGGACCATGCGTCCGGGTTCGC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGGGAGACGGCAGGCCTaGGAACAGGGCCAACCCTGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRGRRQA*EQGQPW
Trigger: CCAGGGTTGGCCCTGTTCCCAGGCCTGCCGTCTCCC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACAGCGCCAGACGCCCTaGCTGGTTACCCCTACAGCC +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRQRQTP*LVTPTA
Trigger: GGCTGTAGGGGTAACCAGGCAGGGCGTCTGGCGCTG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGCCAGACGCCCTGCCTaGTTACCCCTACAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRARRPA*LPLQPP
Trigger: TGGGGGCTGTAGGGGTAACCAGGCAGGGCGTCTGGC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAGGCGCTTTCCCAGGTaGAGCGGCCGGCAGAGTAGA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFRRFPR*SGRQSR
Trigger: TCTACTCTGCCGGCCGCTCCACCTGGGAAAGCGCCT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAGGTGTGTGAACGGCTaGGGAGACCTGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFRCVNG*GDLPWE
Trigger: TTCCCAGGGCAGGTCTCCTCAGCCGTTCACACACCT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCAGGGGAGTGGAAGTTaGGTTAGCCACGGGAGACGG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFQGSGS*VSHGRR
Trigger: CCGTCTCCCGTGGCTAACTCAACTTCCACTCCCCTG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGGCGGCAGGTTTGAGTaGGGTTTCCCTGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFGGRFE*GFPAAE
Trigger: CTCAGCTGCAGGGAAACCGCACTCAAACCTGCCGCC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTACGGCTGAGGAGACCTaGCCTGGGAACACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFTAEET*PGNTGR
Trigger: CCTTCCTGTGTTCCCAGGGCAGGTCTCCTCAGCCGT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAACTGTAGAGGGCGCCTaGAGCCCCGGGAATGAGGGA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRTVEGA*SPGNEG
Trigger: TCCCTCATTCCCGGGGCTGCAGGCGCCCTCTACAGT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAGGCGCTTTCCCAGGTaGAGCGGCCGGCAGAGTAGA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRRRFPR*SGRQSR
Trigger: TCTACTCTGCCGGCCGCTCCACCTGGGAAAGCGCCT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACCGTGGTGTAGGTCCTaGGGTAGGAGTGGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRPWCRS*GRSGCG
Trigger: ACCGCAGCCACTCCTACCCCAGGACCTACACCACGG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTCTGAGGTACCTGGGTaGGGGCCACGCAAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFSEVPG*GPRKRE
Trigger: CTCCCTTTTGCGTGGCCCCCACCCAGGTACCTCAGA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGCCAGAGGTAGCTCTTaGAGGCGCTTTCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRARGSS*RRFPRW
Trigger: CCACCTGGGAAAGCGCCTTCAAGAGCTACCTCTGGC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAGGTGTGTGAACGGCTaGGGAGACCTGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRRCVNG*GDLPWE
Trigger: TTCCCAGGGCAGGTCTCCTCAGCCGTTCACACACCT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACAGGGGAGTGGAAGTTaGGTTAGCCACGGGAGACGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRQGSGS*VSHGRR
Trigger: CCGTCTCCCGTGGCTAACTCAACTTCCACTCCCCTG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTACGCAAAAGGGAGGCTaGGGAGCCACAGCTAACTGG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFTQKGG*GATANW
Trigger: CCAGTTAGCTGTGGCTCCTCAGCCTCCCTTTTGCGT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGCCGTTGAGCTAGGATaGGGGAGAGATGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFAVELG*GRDVEV
Trigger: CACCTCCACATCTCTCCCTCATCCTAGCTCAACGGC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGGCGGCAGGTTTGAGTaGGGTTTCCCTGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRGGRFE*GFPAAE
Trigger: CTCAGCTGCAGGGAAACCGCACTCAAACCTGCCGCC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAACGGCTGAGGAGACCTaGCCTGGGAACACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRTAEET*PGNTGR
Trigger: CCTTCCTGTGTTCCCAGGGCAGGTCTCCTCAGCCGT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTACCAAGAGTGGACCGTaGTGTAGGTCCTGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFTKSGP*CRSWGR
Trigger: CCTACCCCAGGACCTACACCACGGTCCACTCTTGGT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGAACAGGGCCAACCCTaGAGTGGAAGTCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFEQGQP*SGSPLW
Trigger: CCACAGAGGACTTCCACTCCAGGGTTGGCCCTGTTC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATCTGAGGTACCTGGGTaGGGGCCACGCAAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRSEVPG*GPRKRE
Trigger: CTCCCTTTTGCGTGGCCCCCACCCAGGTACCTCAGA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAACGCAAAAGGGAGGCTaGGGAGCCACAGCTAACTGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRTQKGG*GATANW
Trigger: CCAGTTAGCTGTGGCTCCTCAGCCTCCCTTTTGCGT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGCCGTTGAGCTAGGATaGGGGAGAGATGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRAVELG*GRDVEV
Trigger: CACCTCCACATCTCTCCCTCATCCTAGCTCAACGGC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTCTTTGTTACCAGCTaGTGCAGCTTCCGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRLFVTS*CSFRER
Trigger: CCGCTCCCGGAAGCTGCAGCAGCTGGTAACAAAGAG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACAGAGTAGAAACACCTaGGCTCAGAGTCCACGGGCG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRQSRNT*AQSPRA
Trigger: CGCCCGTGGACTCTGAGCGCAGGTGTTTCTACTCTG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGCCCCCACCAGCTCATaGGGACCTACAATAAAGCCA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFAPTSS*GPTIKP
Trigger: TGGCTTTATTGTAGGTCCCCATGAGCTGGTGGGGGC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGGGTTGGATAGGCCTTaGGATGTTGGTGGTAAGGGC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFGLDRP*DVGGKG
Trigger: GCCCTTACCACCAACATCCCAAGGCCTATCCAACCC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGAACAGGGCCAACCCTaGAGTGGAAGTCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFREQGQP*SGSPLW
Trigger: CCACAGAGGACTTCCACTCCAGGGTTGGCCCTGTTC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCCCATCAGGCTGAGCTaGATAGCTTTCCAGAGCCGA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFPIRLS*IAFQSR
Trigger: TCGGCTCTGGAAAGCTATCCAGCTCAGCCTGATGGG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCACTGCCACCCACTCTaGGACAGGCTTGGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFHCHPL*DRLGCK
Trigger: TTTGCAACCAAGCCTGTCCCAGAGTGGGTGGCAGTG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAAGCCAGCCCACTTGTaGCAGCAGAGGATAAAGCAG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFKPAHL*QQRIKQ
Trigger: CTGCTTTATCCTCTGCTGTCACAAGTGGGCTGGCTT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATGGGGTAGGGATGGCTaGTGGGGCATAGCACTTGTT +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRWGRDG*WGIALV
Trigger: AACAAGTGCTATGCCCCATCAGCCATCCCTACCCCA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGAGGGATTCCCAGAATaGGATGGACCTTTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFEGFPE*DGPLKA
Trigger: GGCCTTCAAAGGTCCATCTCATTCTGGGAATCCCTC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGATGGGCACGGATGTTaGAGTATATGCACGGCCCAA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFDGHGC*SICTAQ
Trigger: TTGGGCCGTGCATATACTTCAACATCCGTGCCCATC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGAGAACAGCTGCCGTTaGGCTAGGATGAGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRENSCR*ARMRER
Trigger: TCTCTCCCTCATCCTAGCTCAACGGCAGCTGTTCTC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTATTGGAACTGAATGCTaGGGCGAATCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFIGTEC*GESWED
Trigger: GTCCTCCCAGGATTCGCCTCAGCATTCAGTTCCAAT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTGGTGTTCCTGGCGCTaGAGGATAACTAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFWCSWR*RITRKP
Trigger: GGGTTTCCTAGTTATCCTTCAGCGCCAGGAACACCA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAGGTCCTCTGAGTTTTaGAGAAAAACCCGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFRSSEF*RKTRAR
Trigger: CCGAGCCCGGGTTTTTCTGCAAAACTCAGAGGACCT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGCCCCCACCAGCTCATaGGGACCTACAATAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRAPTSS*GPTIKP
Trigger: TGGCTTTATTGTAGGTCCCCATGAGCTGGTGGGGGC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAGGAGGTGGTTTGGATaGCCCAAGAATTCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFRRWFG*PKNSCS
Trigger: GCTGCACGAATTCTTGGGCCATCCAAACCACCTCCT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGGGTTGGATAGGCCTTaGGATGTTGGTGGTAAGGGC +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRGLDRP*DVGGKG
Trigger: GCCCTTACCACCAACATCCCAAGGCCTATCCAACCC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAACTGTTCACACCAAGTaGACCGGCAACGCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRTVHTK*TGNAGS
Trigger: ACTCCCAGCGTTGCCGGTCCACTTGGTGTGAACAGT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCTGGTGCAATGGGAGTaGAGGAACCATGTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFLVQWE*RNHVVE
Trigger: TTCCACCACATGGTTCCTCCACTCCCATTGCACCAG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACCCATCAGGCTGAGCTaGATAGCTTTCCAGAGCCGA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRPIRLS*IAFQSR
Trigger: TCGGCTCTGGAAAGCTATCCAGCTCAGCCTGATGGG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACACTGCCACCCACTCTaGGACAGGCTTGGTTGCAAA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRHCHPL*DRLGCK
Trigger: TTTGCAACCAAGCCTGTCCCAGAGTGGGTGGCAGTG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAAGAGCCAGGTCCTCTaGGTTTTGCAGAAAAACCCG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFKSQVL*VLQKNP
Trigger: CGGGTTTTTCTGCAAAACTCAGAGGACCTGGCTCTT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGTGGAGGTGGAGCTATaGCATTCGCTAATGGTACCA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFVEVEL*HSLMVP
Trigger: TGGTACCATTAGCGAATGTCATAGCTCCACCTCCAC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAGGTGCAGTGGGCAATaGAGGGGTTCTGATAACTGT +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFRCSGQ*RGSDNC
Trigger: ACAGTTATCAGAACCCCTTCATTGCCCACTGCACCT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAAGCCAGCCCACTTGTaGCAGCAGAGGATAAAGCAG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRKPAHL*QQRIKQ
Trigger: CTGCTTTATCCTCTGCTGTCACAAGTGGGCTGGCTT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGCACTTGTTAGGGGCTaGAGCAGAAGAGTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFALVRG*SRRVRV
Trigger: AACTCTGACTCTTCTGCTTCAGCCCCTAACAAGTGC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGATGGGCACGGATGTTaGAGTATATGCACGGCCCAA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRDGHGC*SICTAQ
Trigger: TTGGGCCGTGCATATACTTCAACATCCGTGCCCATC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGGCAAGCAGATAAACTaGTGGGCACGGATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFGKQIN*WARMLK
Trigger: CTTCAACATCCGTGCCCATCAGTTTATCTGCTTGCC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCAAGCTGGAGAGACCTaGCAATGCAGGATTAAGGCA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFQAGET*QCRIKA
Trigger: TGCCTTAATCCTGCATTGTCAGGTCTCTCCAGCTTG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCCCTGGGAGAGATACTaGCGGATTAAGAGATGGGTT +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFPWERY*RIKRWV
Trigger: AACCCATCTCTTAATCCGTCAGTATCTCTCCCAGGG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAATTGGAACTGAATGCTaGGGCGAATCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRIGTEC*GESWED
Trigger: GTCCTCCCAGGATTCGCCTCAGCATTCAGTTCCAAT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGAACTGCCTGCAGCTTaGAGTCCAGATGATAAACCG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFELPAA*SPDDKP
Trigger: CGGTTTATCATCTGGACTTCAAGCTGCAGGCAGTTC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATGGTGTTCCTGGCGCTaGAGGATAACTAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRWCSWR*RITRKP
Trigger: GGGTTTCCTAGTTATCCTTCAGCGCCAGGAACACCA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAGGTCCTCTGAGTTTTaGAGAAAAACCCGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRRSSEF*RKTRAR
Trigger: CCGAGCCCGGGTTTTTCTGCAAAACTCAGAGGACCT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATGCCTTGACTGGGGATaGAGTAGGAACAGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRCLDWG*SRNRSC
Trigger: GCAACTCCTGTTCCTACTGCATCCCCAGTCAAGGCA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAGCAGTGAATACTGGTaGAATGGGAGTGGAGGAACC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFSSEYW*NGSGGT
Trigger: GGTTCCTCCACTCCCATTGCACCAGTATTCACTGCT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAGCTTATTCACACAATaGTTCAGGGCACCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFSLFTQ*FRAPRA
Trigger: TGCCCGAGGTGCCCTGAACCATTGTGTGAATAAGCT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAAAGACGTTCATCCCTaGTCTGCTCCGCCGATAGTA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFKDVHP*SAPPIV
Trigger: TACTATCGGCGGAGCAGACCAGGGATGAACGTCTTT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTTCATTGCCTTCAACTaGGGCTCGGCCCAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFFIAFN*GSAQEK
Trigger: TTTTTCCTGGGCCGAGCCCCAGTTGAAGGCAATGAA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAGGAGGTGGTTTGGATaGCCCAAGAATTCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRRRWFG*PKNSCS
Trigger: GCTGCACGAATTCTTGGGCCATCCAAACCACCTCCT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTGCATGTGGTCGGCATaGAGGTATCGGATAAGGAAC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFCMWSA*RYRIRN
Trigger: GTTCCTTATCCGATACCTCCATGCCGACCACATGCA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTCATTCCAGAAACGGTaGCAGCTGCTGATGCTGATG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFSFQKR*QLLMLM
Trigger: CATCAGCATCAGCAGCTGCCACCGTTTCTGGAATGA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTTACAGGAGTCGGGTTaGATAGGCCTTGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFLQESG*IGLGML
Trigger: CAACATCCCAAGGCCTATCCAACCCGACTCCTGTAA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTGGTGCAATGGGAGTaGAGGAACCATGTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRLVQWE*RNHVVE
Trigger: TTCCACCACATGGTTCCTCCACTCCCATTGCACCAG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
3UTR CAA 72 bp TTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTaGGCCAGCTTCACATTTGTCAGATTGTTCATTGCA +
Preference number: 4 (lower is better)
Translates to: FSRITLILIFRL*ASFTFVRLFIA
Trigger: TGCAATGAACAATCTGACAAATGTGAAGCTGGCCAAAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGTGGAGGTGGAGCTATaGCATTCGCTAATGGTACCA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRVEVEL*HSLMVP
Trigger: TGGTACCATTAGCGAATGTCATAGCTCCACCTCCAC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTGTTGGGTTTGGTATTaGTGGCTGAGGTGTGTGAAC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFCWVWY*WLRCVN
Trigger: GTTCACACACCTCAGCCATCAATACCAAACCCAACA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAGGTGCAGTGGGCAATaGAGGGGTTCTGATAACTGT +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRRCSGQ*RGSDNC
Trigger: ACAGTTATCAGAACCCCTTCATTGCCCACTGCACCT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGCACTTGTTAGGGGCTaGAGCAGAAGAGTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRALVRG*SRRVRV
Trigger: AACTCTGACTCTTCTGCTTCAGCCCCTAACAAGTGC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGGCAAGCAGATAAACTaGTGGGCACGGATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRGKQIN*WARMLK
Trigger: CTTCAACATCCGTGCCCATCAGTTTATCTGCTTGCC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACAAGCTGGAGAGACCTaGCAATGCAGGATTAAGGCA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRQAGET*QCRIKA
Trigger: TGCCTTAATCCTGCATTGTCAGGTCTCTCCAGCTTG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAAGAAGGAAGAGCAGTaGATACTGGTGCAATGGGAG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFKKEEQ*ILVQWE
Trigger: CTCCCATTGCACCAGTATTCACTGCTCTTCCTTCTT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACCCTGGGAGAGATACTaGCGGATTAAGAGATGGGTT +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRPWERY*RIKRWV
Trigger: AACCCATCTCTTAATCCGTCAGTATCTCTCCCAGGG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAGTAACAGAGAAAAGTaGGGGAACAGCAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFSNREK*GNSSGQ
Trigger: CTGTCCACTGCTGTTCCCTCACTTTTCTCTGTTACT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGAACTGCCTGCAGCTTaGAGTCCAGATGATAAACCG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRELPAA*SPDDKP
Trigger: CGGTTTATCATCTGGACTTCAAGCTGCAGGCAGTTC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGATTGTGAAGGATTCTaGGGAAACCCAGGGATACCC +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRDCEGF*GNPGIP
Trigger: GGGTATCCCTGGGTTTCCTCAGAATCCTTCACAATC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTGGCCCAAGAATTCGTaGAGCTATTCCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFWPKNS*SYSFAF
Trigger: GAAGGCAAAGGAATAGCTGCACGAATTCTTGGGCCA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAACTTGGTGCAATAGTTaGATGTGGTCGGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRTWCNS*MWSAWR
Trigger: CCTCCATGCCGACCACATGCAACTATTGCACCAAGT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAGCAGTGAATACTGGTaGAATGGGAGTGGAGGAACC +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRSSEYW*NGSGGT
Trigger: GGTTCCTCCACTCCCATTGCACCAGTATTCACTGCT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGAAGCTGAATGGACCTaGTGTAACAATGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFEAEWT*CNNADC
Trigger: GCAGTCAGCATTGTTACAGCAGGTCCATTCAGCTTC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAGCTTATTCACACAATaGTTCAGGGCACCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRSLFTQ*FRAPRA
Trigger: TGCCCGAGGTGCCCTGAACCATTGTGTGAATAAGCT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAAAGACGTTCATCCCTaGTCTGCTCCGCCGATAGTA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRKDVHP*SAPPIV
Trigger: TACTATCGGCGGAGCAGACCAGGGATGAACGTCTTT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATTCATTGCCTTCAACTaGGGCTCGGCCCAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRFIAFN*GSAQEK
Trigger: TTTTTCCTGGGCCGAGCCCCAGTTGAAGGCAATGAA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTACCACTTCTGTTGGCTaGACAGCCACCATTTTATGC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFTTSVG*TATILC
Trigger: GCATAAAATGGTGGCTGTCCAGCCAACAGAAGTGGT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTTGAAGGAGGTGGTTTaGATGGCCCAAGAATTCGTG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFLKEVV*MAQEFV
Trigger: CACGAATTCTTGGGCCATCCAAACCACCTCCTTCAA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATGCAATAGTTGCATGTaGTCGGCATGGAGGTATCGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRCNSCM*SAWRYR
Trigger: CCGATACCTCCATGCCGACCACATGCAACTATTGCA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATCATTCCAGAAACGGTaGCAGCTGCTGATGCTGATG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRSFQKR*QLLMLM
Trigger: CATCAGCATCAGCAGCTGCCACCGTTTCTGGAATGA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGTGGTGGTTGTACTGTaGATGGATGTAACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFVVVVL*MDVTGA
Trigger: TGCACCTGTTACATCCATCCACAGTACAACCACCAC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATGGAAGGAACAGGAGTaGTGGTTGTACTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRWKEQE*WLYCGW
Trigger: CCATCCACAGTACAACCACCACTCCTGTTCCTTCCA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAAGCTGATGCAGCAGTaGCTAAAGGAGACTGTACAG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFKLMQQ*LKETVQ
Trigger: CTGTACAGTCTCCTTTAGCCACTGCTGCATCAGCTT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAATTCCCAGAATGAGATaGACCTTTGAAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRIPRMR*TFEGRG
Trigger: CCCTCGGCCTTCAAAGGTCCATCTCATTCTGGGAAT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAAGGAGTACTCAAGCTaGAGAGACCTGACAATGCAG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFKEYSS*RDLTMQ
Trigger: CTGCATTGTCAGGTCTCTCCAGCTTGAGTACTCCTT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGGAGGAACCATGTGGTaGAAGGGAAATAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFGGTMW*KGNRGK
Trigger: CTTTCCTCTATTTCCCTTCCACCACATGGTTCCTCC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAAGAGCAGTGAATACTaGTGCAATGGGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFKSSEY*CNGSGG
Trigger: TCCTCCACTCCCATTGCACCAGTATTCACTGCTCTT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAGAGCCGAAGCTGAATaGACCTGCTGTAACAATGCT +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFRAEAE*TCCNNA
Trigger: AGCATTGTTACAGCAGGTCCATTCAGCTTCGGCTCT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAGTTGCAGCAGGTGTTaGAGGATTAGAACCATGAGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRSCSRC*RIRTMR
Trigger: CCTCATGGTTCTAATCCTTCAACACCTGCTGCAACT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGCTGATGCTGATGGATaGTTAATTGCCTTGACTGGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRADADG*LIALTG
Trigger: CCCAGTCAAGGCAATTAATCATCCATCAGCATCAGC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAAGAAGGAAGAGCAGTaGATACTGGTGCAATGGGAG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRKKEEQ*ILVQWE
Trigger: CTCCCATTGCACCAGTATTCACTGCTCTTCCTTCTT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAGTAACAGAGAAAAGTaGGGGAACAGCAGTGGACAG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRSNREK*GNSSGQ
Trigger: CTGTCCACTGCTGTTCCCTCACTTTTCTCTGTTACT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATGGCCCAAGAATTCGTaGAGCTATTCCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRWPKNS*SYSFAF
Trigger: GAAGGCAAAGGAATAGCTGCACGAATTCTTGGGCCA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGAGGCTAGTGAAAGGTaGAGAAGTAGAAGCAAATGC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFEASER*RSRSKC
Trigger: GCATTTGCTTCTACTTCTGCACCTTTCACTAGCCTC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGGGGTAGATGAAATATaGAGATCTGAGGTACCTGGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRGVDEI*RSEVPG
Trigger: CCCAGGTACCTCAGATCTGCATATTTCATCTACCCC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTGACAAACCTAAAGTaGCATGAGAGGGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRLTNLK*HERDSQ
Trigger: CTGGGAATCCCTCTCATGGCACTTTAGGTTTGTCAG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTGGAAAAACAGAACTaGCTGCAGCTTGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRLEKQN*LQLEVQ
Trigger: CTGGACTTCAAGCTGCAGGCAGTTCTGTTTTTCCAG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTGCGCAGCCGCATTATaGTGTAATTCTTGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFCAAAL*CNSCKD
Trigger: ATCCTTGCAAGAATTACAGCATAATGCGGCTGCGCA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATGTAACAATGCTGACTaGGCAGCCGCATTATGCTGT +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRCNNAD*AAALCC
Trigger: ACAGCATAATGCGGCTGCGCAGTCAGCATTGTTACA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTATTGACCACTTCTGTTaGCTGGACAGCCACCATTTT +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFIDHFC*LDSHHF
Trigger: AAAATGGTGGCTGTCCAGCCAACAGAAGTGGTCAAT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATTGAAGGAGGTGGTTTaGATGGCCCAAGAATTCGTG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRLKEVV*MAQEFV
Trigger: CACGAATTCTTGGGCCATCCAAACCACCTCCTTCAA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTATTAATTGCCTTGACTaGGGATGCAGTAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFINCLD*GCSRNR
Trigger: CCTGTTCCTACTGCATCCCCAGTCAAGGCAATTAAT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGTGGTGGTTGTACTGTaGATGGATGTAACAGGTGCA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRVVVVL*MDVTGA
Trigger: TGCACCTGTTACATCCATCCACAGTACAACCACCAC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAAGGAACAGGAGTGGTaGTTGTACTGTGGATGGATG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRKEQEW*LYCGWM
Trigger: CATCCATCCACAGTACAACCACCACTCCTGTTCCTT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAAGCAAATGCTTCACTaGAACCAAGAGTGGACCGTG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRKQMLH*NQEWTV
Trigger: CACGGTCCACTCTTGGTTCCAGTGAAGCATTTGCTT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAAGCTGATGCAGCAGTaGCTAAAGGAGACTGTACAG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRKLMQQ*LKETVQ
Trigger: CTGTACAGTCTCCTTTAGCCACTGCTGCATCAGCTT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAAGGAGTACTCAAGCTaGAGAGACCTGACAATGCAG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRKEYSS*RDLTMQ
Trigger: CTGCATTGTCAGGTCTCTCCAGCTTGAGTACTCCTT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGGAGGAACCATGTGGTaGAAGGGAAATAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRGGTMW*KGNRGK
Trigger: CTTTCCTCTATTTCCCTTCCACCACATGGTTCCTCC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAGTGGAGGAACCATGTaGTGGAAGGGAAATAGAGGA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRSGGTM*WKGNRG
Trigger: TCCTCTATTTCCCTTCCACCACATGGTTCCTCCACT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAAGAGCAGTGAATACTaGTGCAATGGGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRKSSEY*CNGSGG
Trigger: TCCTCCACTCCCATTGCACCAGTATTCACTGCTCTT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
3UTR CAA 72 bp TCATTCTCATTTTCCGACTTTTGGCCAGCTTCACATTaGTCAGATTGTTCATTGCAGTTCTCAGGCAATTCT +
Preference number: 4 (lower is better)
Translates to: SFSFSDFWPASH*SDCSLQFSGNS
Trigger: AGAATTGCCTGAGAACTGCAATGAACAATCTGACAAATGTGAAGCTGGCCAAAAGTCGGAAAATGAGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGTTCTCAGGCAATTCTaGTGTTGCTCTGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRVLRQF*CCSEGE
Trigger: TTCTCCTTCAGAGCAACATCAGAATTGCCTGAGAAC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGTTATAAGCACTTGGTaGAATAGTTGCATGTGGTCG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFVISTW*NSCMWS
Trigger: CGACCACATGCAACTATTGCACCAAGTGCTTATAAC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGAGGCTAGTGAAAGGTaGAGAAGTAGAAGCAAATGC +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFREASER*RSRSKC
Trigger: GCATTTGCTTCTACTTCTGCACCTTTCACTAGCCTC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATGCGCAGCCGCATTATaGTGTAATTCTTGCAAGGAT +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRCAAAL*CNSCKD
Trigger: ATCCTTGCAAGAATTACAGCATAATGCGGCTGCGCA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGGGATATGGATTTCCTaGGATTGTTCCACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFGIWIS*DCSTRR
Trigger: TCTTCTTGTGGAACAATCCCAGGAAATCCATATCCC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAATTAATTGCCTTGACTaGGGATGCAGTAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRINCLD*GCSRNR
Trigger: CCTGTTCCTACTGCATCCCCAGTCAAGGCAATTAAT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAATGTGGATTATATGTTaGAGGAGGTGGTTTGGATGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRMWIIC*RRWFGW
Trigger: CCATCCAAACCACCTCCTTCAACATATAATCCACAT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTATTCTGTATAGGTTTTaGCGGATTCGAAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFILYRF*RIRKVF
Trigger: GAAGACCTTTCGAATCCGTCAAAACCTATACAGAAT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGAAGAGTCAGAGTTCTaGAGAGTAAGAGAAGATAGT +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFEESEF*RVREDS
Trigger: ACTATCTTCTCTTACTCTTCAGAACTCTGACTCTTC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAGGACGAGAATTCTGTaGATCAATAATGTTCGAGGC +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRRTRIL*INNVRG
Trigger: GCCTCGAACATTATTGATGCACAGAATTCTCGTCCT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGTTCAAGTATTCTCTTaGACCGTTTCTTCTCAGACA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFVQVFS*TVSSQT
Trigger: TGTCTGAGAAGAAACGGTGCAAGAGAATACTTGAAC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAGAAGTAGAAGCAAATaGTTCACTGGAACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFRSRSK*FTGTKS
Trigger: ACTCTTGGTTCCAGTGAAGCATTTGCTTCTACTTCT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGTTGACTTGCTGGGGTaGAAAATGTTTGATTCTGTA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFVDLLG*KMFDSV
Trigger: TACAGAATCAAACATTTTCCACCCCAGCAAGTCAAC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTCATTTTCCGACTTTTaGCCAGCTTCACATTTGTCA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFSFSDF*PASHLS
Trigger: TGACAAATGTGAAGCTGGCCAAAAGTCGGAAAATGA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAATTCTGTATAGGTTTTaGCGGATTCGAAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRILYRF*RIRKVF
Trigger: GAAGACCTTTCGAATCCGTCAAAACCTATACAGAAT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTATAAAGCAGAGGAGTTaGTTAAATTGGTGTCATTGG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFIKQRS*LNWCHW
Trigger: CCAATGACACCAATTTAATCAACTCCTCTGCTTTAT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGAAGAGTCAGAGTTCTaGAGAGTAAGAGAAGATAGT +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFREESEF*RVREDS
Trigger: ACTATCTTCTCTTACTCTTCAGAACTCTGACTCTTC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAACAGCCACCATTTTATaGTGTAATGCTTTCATTGCC +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRTATIL*CNAFIA
Trigger: GGCAATGAAAGCATTACAGCATAAAATGGTGGCTGT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGTTCAAGTATTCTCTTaGACCGTTTCTTCTCAGACA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRVQVFS*TVSSQT
Trigger: TGTCTGAGAAGAAACGGTGCAAGAGAATACTTGAAC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAGAAGTAGAAGCAAATaGTTCACTGGAACCAAGAGT +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRRSRSK*FTGTKS
Trigger: ACTCTTGGTTCCAGTGAAGCATTTGCTTCTACTTCT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTTTCAAAGGAGTTCCTaGGAAAATTCCATTTATGCG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFFQRSS*ENSIYA
Trigger: CGCATAAATGGAATTTTCCCAGGAACTCCTTTGAAA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTATTGTTATAAGCACTTaGTGCAATAGTTGCATGTGG +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFIVIST*CNSCMW
Trigger: CCACATGCAACTATTGCACCAAGTGCTTATAACAAT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAAAGAGTTGACTTGCTaGGGTGGAAAATGTTTGATT +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFKELTC*GGKCLI
Trigger: AATCAAACATTTTCCACCCCAGCAAGTCAACTCTTT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATCATTTTCCGACTTTTaGCCAGCTTCACATTTGTCA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRSFSDF*PASHLS
Trigger: TGACAAATGTGAAGCTGGCCAAAAGTCGGAAAATGA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCCTACTTCCCACATGTaGCAGTTATTACTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFPTSHM*QLLLQN
Trigger: ATTTTGAAGTAATAACTGCCACATGTGGGAAGTAGG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR TCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAATAAAGCAGAGGAGTTaGTTAAATTGGTGTCATTGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRIKQRS*LNWCHW
Trigger: CCAATGACACCAATTTAATCAACTCCTCTGCTTTAT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTTATGCTGTAATTCTTaGAAGGATGATTGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFLCCNS*KDDCEG
Trigger: TCCTTCACAATCATCCTTGCAAGAATTACAGCATAA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATTTCAAAGGAGTTCCTaGGAAAATTCCATTTATGCG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRFQRSS*ENSIYA
Trigger: CGCATAAATGGAATTTTCCCAGGAACTCCTTTGAAA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAATTGTTATAAGCACTTaGTGCAATAGTTGCATGTGG +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRIVIST*CNSCMW
Trigger: CCACATGCAACTATTGCACCAAGTGCTTATAACAAT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAAAGAGTTGACTTGCTaGGGTGGAAAATGTTTGATT +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRKELTC*GGKCLI
Trigger: AATCAAACATTTTCCACCCCAGCAAGTCAACTCTTT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTTTAAGAAAAACAAATaGCAACTTCCAGCAACTGGT +
Preference number: 4 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFFKKNK*QLPATG
Trigger: ACCAGTTGCTGGAAGTTGCCATTTGTTTTTCTTAAA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR GCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATTATGCTGTAATTCTTaGAAGGATGATTGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRLCCNS*KDDCEG
Trigger: TCCTTCACAATCATCCTTGCAAGAATTACAGCATAA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CCA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATTTAAGAAAAACAAATaGCAACTTCCAGCAACTGGT +
Preference number: 4 (lower is better)
Translates to: FSNCCHNFSRITLILIFRFKKNK*QLPATG
Trigger: ACCAGTTGCTGGAAGTTGCCATTTGTTTTTCTTAAA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CCA 90 bp CCTCGGCCGCCGGCCGCGACCCTCACCGCCGCGAACCCGGACGCATaGTCCGGCTCGCGCTCATCCCCAGCCGCTCCGCCCGACTCCTGG +
Preference number: 5 (lower is better)
Translates to: PRPPAATLTAANPDA*SGSRSSPAAPPDSW
Trigger: CCAGGAGTCGGGCGGAGCGGCTGGGGATGAGCGCGAGCCGGACCATGCGTCCGGGTTCGCGGCGGTGAGGGTCGCGGCCGGCGGCCGAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352251.8
ENST00000418503.1
ENST00000625998.2
CDS CCA 90 bp GCATGGTCCGGCTCGCGCTCATCCCCAGCCGCTCCGCCCGACTCCTaGATACCTCGGCCCCGGCAGCAGGCGGCCCGGCAGGCTCTTTGT +
Preference number: 5 (lower is better)
Translates to: AWSGSRSSPAAPPDS*IPRPRQQAARQALC
Trigger: ACAAAGAGCCTGCCGGGCCGCCTGCTGCCGGGGCCGAGGTATCCAGGAGTCGGGCGGAGCGGCTGGGGATGAGCGCGAGCCGGACCATGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CCA 90 bp AGCAAATGCTTCACTGGAACCAAGAGTGGACCGTGGTGTAGGTCCTaGGGTAGGAGTGGCTGCGGTAGGAGTGGCAGAAGGACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: SKCFTGTKSGPWCRS*GRSGCGRSGRRTWQ
Trigger: CTGCCAGGTCCTTCTGCCACTCCTACCGCAGCCACTCCTACCCCAGGACCTACACCACGGTCCACTCTTGGTTCCAGTGAAGCATTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS TCA 90 bp ATTCACACAATGGTTCAGGGCACCTCGGGCAAGAGCCAGGTCCTCTaGGTTTTGCAGAAAAACCCGGGCTCGGCGGCAGGTTTGAGTGCG +
Preference number: 5 (lower is better)
Translates to: IHTMVQGTSGKSQVL*VLQKNPGSAAGLSA
Trigger: CGCACTCAAACCTGCCGCCGAGCCCGGGTTTTTCTGCAAAACTCAGAGGACCTGGCTCTTGCCCGAGGTGCCCTGAACCATTGTGTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352251.8
ENST00000418503.1
ENST00000625998.2
CDS TCA 90 bp GCTGAAGCAGAAAGCCCTGAGAGAACAGCTGCCGTTGAGCTAGGATaGGGGAGAGATGTGGAGGTGGCAGCGGTAGATGAGGTGGCTATT +
Preference number: 5 (lower is better)
Translates to: AEAESPERTAAVELG*GRDVEVAAVDEVAI
Trigger: AATAGCCACCTCATCTACCGCTGCCACCTCCACATCTCTCCCTCATCCTAGCTCAACGGCAGCTGTTCTCTCAGGGCTTTCTGCTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CCA 90 bp TGCAGAAGTAGAAGCAAATGCTTCACTGGAACCAAGAGTGGACCGTaGTGTAGGTCCTGGGGTAGGAGTGGCTGCGGTAGGAGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: CRSRSKCFTGTKSGP*CRSWGRSGCGRSGR
Trigger: TCTGCCACTCCTACCGCAGCCACTCCTACCCCAGGACCTACACCACGGTCCACTCTTGGTTCCAGTGAAGCATTTGCTTCTACTTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CCA 90 bp GGAGTAGAGCCACCAGCAATTACAGGAGTCGGGTTGGATAGGCCTTaGGATGTTGGTGGTAAGGGCAAAGGGAGCCCTGCAAAAACTGAT +
Preference number: 5 (lower is better)
Translates to: GVEPPAITGVGLDRP*DVGGKGKGSPAKTD
Trigger: ATCAGTTTTTGCAGGGCTCCCTTTGCCCTTACCACCAACATCCCAAGGCCTATCCAACCCGACTCCTGTAATTGCTGGTGGCTCTACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS TCA 90 bp CAGATGCTGTACTTTTTACCTACAGAGAGAGCATGTGCATGCCTGTaGGGCAGGGGAAAGGACCCACTGGTGGTAAGGGAGCCAGATTCT +
Preference number: 5 (lower is better)
Translates to: QMLYFLPTERACACL*GRGKDPLVVREPDS
Trigger: AGAATCTGGCTCCCTTACCACCAGTGGGTCCTTTCCCCTGCCTCACAGGCATGCACATGCTCTCTCTGTAGGTAAAAAGTACAGCATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484434.3
CDS GCA 90 bp GAAGCTAAGCCAGATGCTGTACTTTTTACCTACAGAGAGAGCATGTaGATGCCTGTGAGGCAGGGGAAAGGACCCACTGGTGGTAAGGGA +
Preference number: 5 (lower is better)
Translates to: EAKPDAVLFTYRESM*MPVRQGKGPTGGKG
Trigger: TCCCTTACCACCAGTGGGTCCTTTCCCCTGCCTCACAGGCATGCACATGCTCTCTCTGTAGGTAAAAAGTACAGCATCTGGCTTAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484434.3
CDS TCA 90 bp ACTCTGGGACAGGCTTGGTTGCAAAGAAAATGGTGTTCCTGGCGCTaGAGGATAACTAGGAAACCCATCAGGCTGAGCTGGATAGCTTTC +
Preference number: 5 (lower is better)
Translates to: TLGQAWLQRKWCSWR*RITRKPIRLSWIAF
Trigger: GAAAGCTATCCAGCTCAGCCTGATGGGTTTCCTAGTTATCCTTCAGCGCCAGGAACACCATTTTCTTTGCAACCAAGCCTGTCCCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352251.8
ENST00000484434.3
ENST00000492646.1
ENST00000625998.2
CDS TCA 90 bp GCCGCATTATGCTGTAATTCTTGCAAGGATGATTGTGAAGGATTCTaGGGAAACCCAGGGATACCCGGGAGGGACAAAAGGCCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: AALCCNSCKDDCEGF*GNPGIPGRDKRPGK
Trigger: TTTTCCAGGCCTTTTGTCCCTCCCGGGTATCCCTGGGTTTCCTCAGAATCCTTCACAATCATCCTTGCAAGAATTACAGCATAATGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352251.8
ENST00000468017.1
ENST00000492646.1
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGGCCCGGCAGGCTCTTaGTTACCAGCTGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFGPAGS*LPAAAA
Trigger: AGCTGCAGCAGCTGGTAACAAAGAGCCTGCCGGGCC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGGCTCGGCGGCAGGTTaGAGTGCGGTTTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRGSAAG*SAVSLQ
Trigger: CTGCAGGGAAACCGCACTCAAACCTGCCGCCGAGCC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS TCA 90 bp GCCGCATTATGCTGTAATTCTTGCAAGGATGATTGTGAAGGATTCTaGGGAAACCCAGGGATACCCGGGAGGGACAAAAGGCTAAAAATG +
Preference number: 5 (lower is better)
Translates to: AALCCNSCKDDCEGF*GNPGIPGRDKRLKM
Trigger: CATTTTTAGCCTTTTGTCCCTCCCGGGTATCCCTGGGTTTCCTCAGAATCCTTCACAATCATCCTTGCAAGAATTACAGCATAATGCGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484434.3
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGGCCCGGCAGGCTCTTaGTTACCAGCTGCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRGPAGS*LPAAAA
Trigger: AGCTGCAGCAGCTGGTAACAAAGAGCCTGCCGGGCC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS GCA 90 bp ATTGTTGGTCAAAGAAGTAAAAGAAGGAAGAGCAGTGAATACTGGTaGAATGGGAGTGGAGGAACCATGTGGTGGAAGGGAAATAGAGGA +
Preference number: 5 (lower is better)
Translates to: IVGQRSKRRKSSEYW*NGSGGTMWWKGNRG
Trigger: TCCTCTATTTCCCTTCCACCACATGGTTCCTCCACTCCCATTGCACCAGTATTCACTGCTCTTCCTTCTTTTACTTCTTTGACCAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAACAGCAGTGGACAGGTaGAGGGGGAAAGGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRTAVDR*RGKGAA
Trigger: AGCAGCACCTTTCCCCCTCAACCTGTCCACTGCTGT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS TCA 90 bp AACTGGGGCTCGGCCCAGGAAAAATATCTCAGCAAATCAACCACCTaGAAACAAAGAACTAACAGCTCTAATGACAGCATGTTTGCAAAC +
Preference number: 5 (lower is better)
Translates to: NWGSAQEKYLSKSTT*KQRTNSSNDSMFAN
Trigger: GTTTGCAAACATGCTGTCATTAGAGCTGTTAGTTCTTTGTTTTCAGGTGGTTGATTTGCTGAGATATTTTTCCTGGGCCGAGCCCCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436678.1
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGCTGTAATGCTTTCATaGCCTTCAACTGGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFAVMLS*PSTGAR
Trigger: CCGAGCCCCAGTTGAAGGCAATGAAAGCATTACAGC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCGGCTAGGTCTTCCTTaGGGATATGGATTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFRLGLP*GYGFPG
Trigger: CCCAGGAAATCCATATCCCAAAGGAAGACCTAGCCG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CCA 90 bp AATTCCATTTATGCGGCTAGGTCTTCCTTTGGGATATGGATTTCCTaGGATTGTTCCACAAGAAGATATCATAGCATGAGGAGCTTTGCA +
Preference number: 5 (lower is better)
Translates to: NSIYAARSSFGIWIS*DCSTRRYHSMRSFA
Trigger: TGCAAAGCTCCTCATGCTATGATATCTTCTTGTGGAACAATCCCAGGAAATCCATATCCCAAAGGAAGACCTAGCCGCATAAATGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352251.8
ENST00000436678.1
ENST00000496138.2
ENST00000625998.2
CDS CCA 90 bp TCCTATTTCCCACTGCATGCTCATTGCAGGGATAAGTTCAGTGAATaGCATGGCAGGCAGAACCTGCTATACTTACATTATTTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: SYFPLHAHCRDKFSE*HGRQNLLYLHYLSF
Trigger: AAAAGACAAATAATGTAAGTATAGCAGGTTCTGCCTGCCATGCCATTCACTGAACTTATCCCTGCAATGAGCATGCAGTGGGAAATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602512.1
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGCTGTAATGCTTTCATaGCCTTCAACTGGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRAVMLS*PSTGAR
Trigger: CCGAGCCCCAGTTGAAGGCAATGAAAGCATTACAGC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTATTACAGGAGTCGGGTaGGATAGGCCTTGGGATGTT +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFITGVG*DRPWDV
Trigger: AACATCCCAAGGCCTATCCAACCCGACTCCTGTAAT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAGAGCGGAGTTGAAATaGGAACTGAATGCTGAGGCG +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFRAELK*ELNAEA
Trigger: CGCCTCAGCATTCAGTTCCAATTTCAACTCCGCTCT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCTGGGACAGGCTTGGTaGCAAAGAAAATGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFLGQAW*QRKWCS
Trigger: GGAACACCATTTTCTTTGCAACCAAGCCTGTCCCAG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCACTCTGGGACAGGCTaGGTTGCAAAGAAAATGGTG +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFHSGTG*VAKKMV
Trigger: CACCATTTTCTTTGCAACCAAGCCTGTCCCAGAGTG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAATTACAGGAGTCGGGTaGGATAGGCCTTGGGATGTT +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRITGVG*DRPWDV
Trigger: AACATCCCAAGGCCTATCCAACCCGACTCCTGTAAT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCTGGATAGGAGGGATTaGAAGATGACAGAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFLDRRD*KMTEVL
Trigger: AAGGACCTCTGTCATCTTCAAATCCCTCCTATCCAG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAAGAGCGGAGTTGAAATaGGAACTGAATGCTGAGGCG +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRRAELK*ELNAEA
Trigger: CGCCTCAGCATTCAGTTCCAATTTCAACTCCGCTCT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS TCA 90 bp AATACTTTACTACTCTATCTGAAGAGCAAGAGGATTACCAGAAACTaGGTGAGTGCTCTTTTATCCCCTAGCATCTCTACCTTAGCTTGT +
Preference number: 5 (lower is better)
Translates to: NTLLLYLKSKRITRN*VSALLSPSISTLAC
Trigger: ACAAGCTAAGGTAGAGATGCTAGGGGATAAAAGAGCACTCACTCAGTTTCTGGTAATCCTCTTGCTCTTCAGATAGAGTAGTAAAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602899.1
CDS CCA 90 bp ACAGTTGATGGAGCTTACCTAAGTAACAAAAAGCATTCAAAGCACTaGTCTTTAGAAAACTGGAAGTATCTGAAGCTAAGCCAGATGCTG +
Preference number: 5 (lower is better)
Translates to: TVDGAYLSNKKHSKH*SLENWKYLKLSQML
Trigger: CAGCATCTGGCTTAGCTTCAGATACTTCCAGTTTTCTAAAGACCAGTGCTTTGAATGCTTTTTGTTACTTAGGTAAGCTCCATCAACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484434.3
CDS CCA 90 bp AAACCTTCTAGGTTTTACAATCTCAAATTACGCAAGAACTCCCAATaGCAACATCCTCCTAAACTGATAGGAATTCATCCTCTCATTCCC +
Preference number: 5 (lower is better)
Translates to: KPSRFYNLKLRKNSQ*QHPPKLIGIHPLIP
Trigger: GGGAATGAGAGGATGAATTCCTATCAGTTTAGGAGGATGTTGCCATTGGGAGTTCTTGCGTAATTTGAGATTGTAAAACCTAGAAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484434.3
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGACTTTTTATCCATCTaGACTACTATCCCGACGTGG +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFDFLSI*TTIPTW
Trigger: CCACGTCGGGATAGTAGTCAAGATGGATAAAAAGTC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCGTGCAGCTATTCCTTaGCCTTCGTTAGTACATTCT +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFRAAIP*PSLVHS
Trigger: AGAATGTACTAACGAAGGCAAAGGAATAGCTGCACG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTATGAGGAGAAAAGAGTaGACTTGCTGGGGTGGAAAA +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFMRRKE*TCWGGK
Trigger: TTTTCCACCCCAGCAAGTCAACTCTTTTCTCCTCAT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTGTTGGGTTTGGTATaGATGGCTGAGGTGTGTGAA +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRLLGLV*MAEVCE
Trigger: TTCACACACCTCAGCCATCAATACCAAACCCAACAG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGAAGCAGAATTTGGGTaGCTGGTAGAAGCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFREAEFG*LVEAAE
Trigger: TTCTGCTGCTTCTACCAGCAACCCAAATTCTGCTTC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTGGATAGGAGGGATTaGAAGATGACAGAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRLDRRD*KMTEVL
Trigger: AAGGACCTCTGTCATCTTCAAATCCCTCCTATCCAG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGCAACAAGAGCGGAGTaGAAATTGGAACTGAATGCT +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFATRAE*KLELNA
Trigger: AGCATTCAGTTCCAATTTCAACTCCGCTCTTGTTGC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCTCATTTTCCGACTTTaGGCCAGCTTCACATTTGTC +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFLIFRL*ASFTFV
Trigger: GACAAATGTGAAGCTGGCCAAAAGTCGGAAAATGAG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGACTTTTTATCCATCTaGACTACTATCCCGACGTGG +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRDFLSI*TTIPTW
Trigger: CCACGTCGGGATAGTAGTCAAGATGGATAAAAAGTC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTAAACAGTTGAGTATATaGACCACTTCTGTTGGCTGG +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFKQLSI*TTSVGW
Trigger: CCAGCCAACAGAAGTGGTCAATATACTCAACTGTTT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTGTTCAAGTATTCTCTaGCACCGTTTCTTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFCSSIL*HRFFSD
Trigger: GTCTGAGAAGAAACGGTGCAAGAGAATACTTGAACA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACGTGCAGCTATTCCTTaGCCTTCGTTAGTACATTCT +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRRAAIP*PSLVHS
Trigger: AGAATGTACTAACGAAGGCAAAGGAATAGCTGCACG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAATGAGGAGAAAAGAGTaGACTTGCTGGGGTGGAAAA +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRMRRKE*TCWGGK
Trigger: TTTTCCACCCCAGCAAGTCAACTCTTTTCTCCTCAT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCTTGTGGGCTCAGTTTaGATCATAACAGGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFLVGSV*IITGRV
Trigger: AACTCTTCCTGTTATGATCAAAACTGAGCCCACAAG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTCATTTTCCGACTTTaGGCCAGCTTCACATTTGTC +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRLIFRL*ASFTFV
Trigger: GACAAATGTGAAGCTGGCCAAAAGTCGGAAAATGAG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATGTTCAAGTATTCTCTaGCACCGTTTCTTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRCSSIL*HRFFSD
Trigger: GTCTGAGAAGAAACGGTGCAAGAGAATACTTGAACA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTATGGATTTCCTGGGATaGTTCCACAAGAAGATATCA +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFMDFLG*FHKKIS
Trigger: TGATATCTTCTTGTGGAACAATCCCAGGAAATCCAT...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTTATGTGGATTATATGTaGAAGGAGGTGGTTTGGATG +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFYVDYM*KEVVWM
Trigger: CATCCAAACCACCTCCTTCAACATATAATCCACATA...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGAGGAGTTGATTAAATaGGTGTCATTGGATGTCAGA +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFEELIK*VSLDVR
Trigger: TCTGACATCCAATGACACCAATTTAATCAACTCCTC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTGTGGGCTCAGTTTaGATCATAACAGGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRLVGSV*IITGRV
Trigger: AACTCTTCCTGTTATGATCAAAACTGAGCCCACAAG...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGGATTAAGAGATGGGTaGCCAGTTAAAGGAAAATTG +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFGLRDG*PVKGKL
Trigger: CAATTTTCCTTTAACTGGCAACCCATCTCTTAATCC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTCTGAAAGTGAAACAGTaGAGTATATTGACCACTTCT +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFLKVKQ*SILTTS
Trigger: AGAAGTGGTCAATATACTCAACTGTTTCACTTTCAG...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAATGGATTTCCTGGGATaGTTCCACAAGAAGATATCA +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRMDFLG*FHKKIS
Trigger: TGATATCTTCTTGTGGAACAATCCCAGGAAATCCAT...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGATATGTGGATTATATGTaGAAGGAGGTGGTTTGGATG +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRYVDYM*KEVVWM
Trigger: CATCCAAACCACCTCCTTCAACATATAATCCACATA...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp CAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGACTTTGATAAAGCAGAGGAGTaGATTAAATTGGTGTCATTG +
Preference number: 5 (lower is better)
Translates to: QIVVTISPGLPSFSFSDFDKAEE*IKLVSL
Trigger: CAATGACACCAATTTAATCAACTCCTCTGCTTTATC...AAAGTCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGGATTAAGAGATGGGTaGCCAGTTAAAGGAAAATTG +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRGLRDG*PVKGKL
Trigger: CAATTTTCCTTTAACTGGCAACCCATCTCTTAATCC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS-3UTR CAA 90 bp TTTTCAAATTGTTGTCACAATTTCTCCAGGATTACCCTCATTCTCATTTTCCGAGATAAAGCAGAGGAGTaGATTAAATTGGTGTCATTG +
Preference number: 5 (lower is better)
Translates to: FSNCCHNFSRITLILIFRDKAEE*IKLVSL
Trigger: CAATGACACCAATTTAATCAACTCCTCTGCTTTATC...TCGGAAAATGAGAATGAGGGTAATCCTGGAGAAATTGTGACAACAATTTGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CCA 72 bp CCGGCCGCGACCCTCACCGCCGCGAACCCGGACGCATaGTCCGGCTCGCGCTCATCCCCAGCCGCTCCGCCC +
Preference number: 6 (lower is better)
Translates to: PAATLTAANPDA*SGSRSSPAAPP
Trigger: GGGCGGAGCGGCTGGGGATGAGCGCGAGCCGGACCATGCGTCCGGGTTCGCGGCGGTGAGGGTCGCGGCCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352251.8
ENST00000418503.1
ENST00000625998.2
CDS GCA 72 bp GGCAGCAGGCGGCCCGGCAGGCTCTTTGTTACCAGCTaGTGCAGCTTCCGGGAGCGGGCCGGCGGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: GSRRPGRLFVTS*CSFRERAGGWG
Trigger: TCCCCAGCCGCCGGCCCGCTCCCGGAAGCTGCAGCAGCTGGTAACAAAGAGCCTGCCGGGCCGCCTGCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CAA 72 bp ACCTCGGCCCCGGCAGCAGGCGGCCCGGCAGGCTCTTaGTTACCAGCTGCTGCAGCTTCCGGGAGCGGGCCG +
Preference number: 6 (lower is better)
Translates to: TSAPAAGGPAGS*LPAAAASGSGP
Trigger: CGGCCCGCTCCCGGAAGCTGCAGCAGCTGGTAACAAAGAGCCTGCCGGGCCGCCTGCTGCCGGGGCCGAGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CAA 90 bp CTCCTGGATACCTCGGCCCCGGCAGCAGGCGGCCCGGCAGGCTCTTaGTTACCAGCTGCTGCAGCTTCCGGGAGCGGGCCGGCGGCTGGG +
Preference number: 6 (lower is better)
Translates to: LLDTSAPAAGGPAGS*LPAAAASGSGPAAG
Trigger: CCCAGCCGCCGGCCCGCTCCCGGAAGCTGCAGCAGCTGGTAACAAAGAGCCTGCCGGGCCGCCTGCTGCCGGGGCCGAGGTATCCAGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS GCA 72 bp AGCAGGCGGCCCGGCAGGCTCTTTGTTACCAGCTGCTaGAGCTTCCGGGAGCGGGCCGGCGGCTGGGGAGCA +
Preference number: 6 (lower is better)
Translates to: SRRPGRLFVTSC*SFRERAGGWGA
Trigger: TGCTCCCCAGCCGCCGGCCCGCTCCCGGAAGCTGCAGCAGCTGGTAACAAAGAGCCTGCCGGGCCGCCTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS GCA 72 bp TTTGCAGAAAAACCCGGGCTCGGCGGCAGGTTTGAGTaGGGTTTCCCTGCAGCTGAGGGCCAGGTGCCGCCA +
Preference number: 6 (lower is better)
Translates to: FAEKPGLGGRFE*GFPAAEGQVPP
Trigger: TGGCGGCACCTGGCCCTCAGCTGCAGGGAAACCGCACTCAAACCTGCCGCCGAGCCCGGGTTTTTCTGCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352251.8
ENST00000418503.1
ENST00000625998.2
CDS TCA 72 bp ATGGTTCAGGGCACCTCGGGCAAGAGCCAGGTCCTCTaGGTTTTGCAGAAAAACCCGGGCTCGGCGGCAGGT +
Preference number: 6 (lower is better)
Translates to: MVQGTSGKSQVL*VLQKNPGSAAG
Trigger: ACCTGCCGCCGAGCCCGGGTTTTTCTGCAAAACTCAGAGGACCTGGCTCTTGCCCGAGGTGCCCTGAACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352251.8
ENST00000418503.1
ENST00000625998.2
CDS CCA 72 bp TTCACTGGAACCAAGAGTGGACCGTGGTGTAGGTCCTaGGGTAGGAGTGGCTGCGGTAGGAGTGGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: FTGTKSGPWCRS*GRSGCGRSGRR
Trigger: CCTTCTGCCACTCCTACCGCAGCCACTCCTACCCCAGGACCTACACCACGGTCCACTCTTGGTTCCAGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CAA 90 bp CCGGCAACGCTGGGAGTAGAGCCACCAGCAATTACAGGAGTCGGGTaGGATAGGCCTTGGGATGTTGGTGGTAAGGGCAAAGGGAGCCCT +
Preference number: 6 (lower is better)
Translates to: PATLGVEPPAITGVG*DRPWDVGGKGKGSP
Trigger: AGGGCTCCCTTTGCCCTTACCACCAACATCCCAAGGCCTATCCAACCCGACTCCTGTAATTGCTGGTGGCTCTACTCCCAGCGTTGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS TCA 72 bp AGGAGACTGTACAGGCAATGTCAGGGGAGTGGAAGTTaGGTTAGCCACGGGAGACGGCAGGCCTGGGAACAG +
Preference number: 6 (lower is better)
Translates to: RRLYRQCQGSGS*VSHGRRQAWEQ
Trigger: CTGTTCCCAGGCCTGCCGTCTCCCGTGGCTAACTCAACTTCCACTCCCCTGACATTGCCTGTACAGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS TCA 72 bp GAAAGCCCTGAGAGAACAGCTGCCGTTGAGCTAGGATaGGGGAGAGATGTGGAGGTGGCAGCGGTAGATGAG +
Preference number: 6 (lower is better)
Translates to: ESPERTAAVELG*GRDVEVAAVDE
Trigger: CTCATCTACCGCTGCCACCTCCACATCTCTCCCTCATCCTAGCTCAACGGCAGCTGTTCTCTCAGGGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CCA 72 bp ACACTCCAGTCAGGCTTCCCCAGCTTATTCACACAATaGTTCAGGGCACCTCGGGCAAGAGCCAGGTCCTCT +
Preference number: 6 (lower is better)
Translates to: TLQSGFPSLFTQ*FRAPRARARSS
Trigger: AGAGGACCTGGCTCTTGCCCGAGGTGCCCTGAACCATTGTGTGAATAAGCTGGGGAAGCCTGACTGGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352251.8
ENST00000418503.1
ENST00000625998.2
CDS CCA 72 bp AGAAGCAAATGCTTCACTGGAACCAAGAGTGGACCGTaGTGTAGGTCCTGGGGTAGGAGTGGCTGCGGTAGG +
Preference number: 6 (lower is better)
Translates to: RSKCFTGTKSGP*CRSWGRSGCGR
Trigger: CCTACCGCAGCCACTCCTACCCCAGGACCTACACCACGGTCCACTCTTGGTTCCAGTGAAGCATTTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CCA 72 bp CCACCAGCAATTACAGGAGTCGGGTTGGATAGGCCTTaGGATGTTGGTGGTAAGGGCAAAGGGAGCCCTGCA +
Preference number: 6 (lower is better)
Translates to: PPAITGVGLDRP*DVGGKGKGSPA
Trigger: TGCAGGGCTCCCTTTGCCCTTACCACCAACATCCCAAGGCCTATCCAACCCGACTCCTGTAATTGCTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CAA 72 bp CTGGGAGTAGAGCCACCAGCAATTACAGGAGTCGGGTaGGATAGGCCTTGGGATGTTGGTGGTAAGGGCAAA +
Preference number: 6 (lower is better)
Translates to: LGVEPPAITGVG*DRPWDVGGKGK
Trigger: TTTGCCCTTACCACCAACATCCCAAGGCCTATCCAACCCGACTCCTGTAATTGCTGGTGGCTCTACTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CAA 72 bp TACCCTGCAGCTGTAGTGCAGAGAGGACCACTATCATaGGCTGACCTGACAGACAGCTCCTCTGAGTACCAG +
Preference number: 6 (lower is better)
Translates to: YPAAVVQRGPLS*ADLTDSSSEYQ
Trigger: CTGGTACTCAGAGGAGCTGTCTGTCAGGTCAGCCAATGATAGTGGTCCTCTCTGCACTACAGCTGCAGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602899.1
CDS CAA 90 bp GAGAAAGTGTACCCTGCAGCTGTAGTGCAGAGAGGACCACTATCATaGGCTGACCTGACAGACAGCTCCTCTGAGTACCAGTGCCTACAG +
Preference number: 6 (lower is better)
Translates to: EKVYPAAVVQRGPLS*ADLTDSSSEYQCLQ
Trigger: CTGTAGGCACTGGTACTCAGAGGAGCTGTCTGTCAGGTCAGCCAATGATAGTGGTCCTCTCTGCACTACAGCTGCAGGGTACACTTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602899.1
CDS TCA 72 bp TACTTTTTACCTACAGAGAGAGCATGTGCATGCCTGTaGGGCAGGGGAAAGGACCCACTGGTGGTAAGGGAG +
Preference number: 6 (lower is better)
Translates to: YFLPTERACACL*GRGKDPLVVRE
Trigger: CTCCCTTACCACCAGTGGGTCCTTTCCCCTGCCTCACAGGCATGCACATGCTCTCTCTGTAGGTAAAAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484434.3
CDS GCA 72 bp ACAGGAAGAGTTGTTGCAGCAGGGGTAGATGAAATATaGAGATCTGAGGTACCTGGGTGGGGGCCACGCAAA +
Preference number: 6 (lower is better)
Translates to: TGRVVAAGVDEI*RSEVPGWGPRK
Trigger: TTTGCGTGGCCCCCACCCAGGTACCTCAGATCTGCATATTTCATCTACCCCTGCTGCAACAACTCTTCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS GCA 72 bp CCAGATGCTGTACTTTTTACCTACAGAGAGAGCATGTaGATGCCTGTGAGGCAGGGGAAAGGACCCACTGGT +
Preference number: 6 (lower is better)
Translates to: PDAVLFTYRESM*MPVRQGKGPTG
Trigger: ACCAGTGGGTCCTTTCCCCTGCCTCACAGGCATGCACATGCTCTCTCTGTAGGTAAAAAGTACAGCATCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484434.3
CDS CAA 72 bp CAATTACAGGAGTCGGGTTGGATAGGCCTTGGGATGTaGGTGGTAAGGGCAAAGGGAGCCCTGCAAAAACTG +
Preference number: 6 (lower is better)
Translates to: QLQESGWIGLGM*VVRAKGALQKL
Trigger: CAGTTTTTGCAGGGCTCCCTTTGCCCTTACCACCAACATCCCAAGGCCTATCCAACCCGACTCCTGTAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CAA 90 bp AGCCACCAGCAATTACAGGAGTCGGGTTGGATAGGCCTTGGGATGTaGGTGGTAAGGGCAAAGGGAGCCCTGCAAAAACTGATGACAATG +
Preference number: 6 (lower is better)
Translates to: SHQQLQESGWIGLGM*VVRAKGALQKLMTM
Trigger: CATTGTCATCAGTTTTTGCAGGGCTCCCTTTGCCCTTACCACCAACATCCCAAGGCCTATCCAACCCGACTCCTGTAATTGCTGGTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS GCA 72 bp GCCGAAGCTGAATGGACCTGCTGTAACAATGCTGACTaGGCAGCCGCATTATGCTGTAATTCTTGCAAGGAT +
Preference number: 6 (lower is better)
Translates to: AEAEWTCCNNAD*AAALCCNSCKD
Trigger: ATCCTTGCAAGAATTACAGCATAATGCGGCTGCGCAGTCAGCATTGTTACAGCAGGTCCATTCAGCTTCGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352251.8
ENST00000484434.3
ENST00000492646.1
ENST00000625998.2
CDS CAA 72 bp TTGAAGGCCGAGGGAGTAGGACTTGTGGGCTCAGTTTaGATCATAACAGGAAGAGTTGTTGCAGCAGGGGTA +
Preference number: 6 (lower is better)
Translates to: LKAEGVGLVGSV*IITGRVVAAGV
Trigger: TACCCCTGCTGCAACAACTCTTCCTGTTATGATCAAAACTGAGCCCACAAGTCCTACTCCCTCGGCCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS TCA 72 bp TGCTGTAATTCTTGCAAGGATGATTGTGAAGGATTCTaGGGAAACCCAGGGATACCCGGGAGGGACAAAAGG +
Preference number: 6 (lower is better)
Translates to: CCNSCKDDCEGF*GNPGIPGRDKR
Trigger: CCTTTTGTCCCTCCCGGGTATCCCTGGGTTTCCTCAGAATCCTTCACAATCATCCTTGCAAGAATTACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352251.8
ENST00000468017.1
ENST00000484434.3
ENST00000492646.1
ENST00000625998.2
CDS GCA 72 bp ACAACCAGAGATTCCTATTTCCCACTGCATGCTCATTaGAGGGATAAGTTCAGTGAATGGCATGGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: TTRDSYFPLHAH*RDKFSEWHGRQ
Trigger: CTGCCTGCCATGCCATTCACTGAACTTATCCCTGCAATGAGCATGCAGTGGGAAATAGGAATCTCTGGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602512.1
CDS CAA 90 bp GATGGACCTTTGAAGGCCGAGGGAGTAGGACTTGTGGGCTCAGTTTaGATCATAACAGGAAGAGTTGTTGCAGCAGGGGTAGATGAAATA +
Preference number: 6 (lower is better)
Translates to: DGPLKAEGVGLVGSV*IITGRVVAAGVDEI
Trigger: TATTTCATCTACCCCTGCTGCAACAACTCTTCCTGTTATGATCAAAACTGAGCCCACAAGTCCTACTCCCTCGGCCTTCAAAGGTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS TCA 72 bp GACAAAAGGCCTGGAAAAACAGAACTGCCTGCAGCTTaGAGTCCAGATGATAAACCGGCTTGTGCAACAAGA +
Preference number: 6 (lower is better)
Translates to: DKRPGKTELPAA*SPDDKPACATR
Trigger: TCTTGTTGCACAAGCCGGTTTATCATCTGGACTTCAAGCTGCAGGCAGTTCTGTTTTTCCAGGCCTTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352251.8
ENST00000468017.1
ENST00000625998.2
CDS GCA 72 bp CAGACCTGCATTGTTATAAGCACTTGGTGCAATAGTTaGATGTGGTCGGCATGGAGGTATCGGATAAGGAAC +
Preference number: 6 (lower is better)
Translates to: QTCIVISTWCNS*MWSAWRYRIRN
Trigger: GTTCCTTATCCGATACCTCCATGCCGACCACATGCAACTATTGCACCAAGTGCTTATAACAATGCAGGTCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352251.8
ENST00000496138.2
ENST00000625998.2
CDS GCA 72 bp CAAAGAAGTAAAAGAAGGAAGAGCAGTGAATACTGGTaGAATGGGAGTGGAGGAACCATGTGGTGGAAGGGA +
Preference number: 6 (lower is better)
Translates to: QRSKRRKSSEYW*NGSGGTMWWKG
Trigger: TCCCTTCCACCACATGGTTCCTCCACTCCCATTGCACCAGTATTCACTGCTCTTCCTTCTTTTACTTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS GCA 72 bp ACCTGCTGTAACAATGCTGACTGCGCAGCCGCATTATaGTGTAATTCTTGCAAGGATGATTGTGAAGGATTC +
Preference number: 6 (lower is better)
Translates to: TCCNNADCAAAL*CNSCKDDCEGF
Trigger: GAATCCTTCACAATCATCCTTGCAAGAATTACAGCATAATGCGGCTGCGCAGTCAGCATTGTTACAGCAGGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352251.8
ENST00000484434.3
ENST00000492646.1
ENST00000625998.2
CDS GCA 72 bp CTCTGCTGTAACAATGCTGACTGCGCAGCCGCATTATaGTGTAATTCTTGCAAGGATGATTGTGAAGGATTC +
Preference number: 6 (lower is better)
Translates to: LCCNNADCAAAL*CNSCKDDCEGF
Trigger: GAATCCTTCACAATCATCCTTGCAAGAATTACAGCATAATGCGGCTGCGCAGTCAGCATTGTTACAGCAGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468017.1
CDS GCA 72 bp GCAATTCTGATGTTGCTCTGCTGTAACAATGCTGACTaGGCAGCCGCATTATGCTGTAATTCTTGCAAGGAT +
Preference number: 6 (lower is better)
Translates to: AILMLLCCNNAD*AAALCCNSCKD
Trigger: ATCCTTGCAAGAATTACAGCATAATGCGGCTGCGCAGTCAGCATTGTTACAGCAGAGCAACATCAGAATTGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468017.1
CDS CCA 72 bp CCACTGCATGCTCATTGCAGGGATAAGTTCAGTGAATaGCATGGCAGGCAGAACCTGCTATACTTACATTAT +
Preference number: 6 (lower is better)
Translates to: PLHAHCRDKFSE*HGRQNLLYLHY
Trigger: ATAATGTAAGTATAGCAGGTTCTGCCTGCCATGCCATTCACTGAACTTATCCCTGCAATGAGCATGCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602512.1
CDS GCA 72 bp CACCAAATGAAACAACCAGAGATTCCTATTTCCCACTaGATGCTCATTGCAGGGATAAGTTCAGTGAATGGC +
Preference number: 6 (lower is better)
Translates to: HQMKQPEIPISH*MLIAGISSVNG
Trigger: GCCATTCACTGAACTTATCCCTGCAATGAGCATGCAGTGGGAAATAGGAATCTCTGGTTGTTTCATTTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602512.1
CDS CCA 72 bp TATGCGGCTAGGTCTTCCTTTGGGATATGGATTTCCTaGGATTGTTCCACAAGAAGATATCATAGCATGAGG +
Preference number: 6 (lower is better)
Translates to: YAARSSFGIWIS*DCSTRRYHSMR
Trigger: CCTCATGCTATGATATCTTCTTGTGGAACAATCCCAGGAAATCCATATCCCAAAGGAAGACCTAGCCGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352251.8
ENST00000436678.1
ENST00000496138.2
ENST00000625998.2
CDS CCA 72 bp ATAAGCACTTGGTGCAATAGTTGCATGTGGTCGGCATaGAGGTATCGGATAAGGAACAGGTTTATGTGGATT +
Preference number: 6 (lower is better)
Translates to: ISTWCNSCMWSA*RYRIRNRFMWI
Trigger: AATCCACATAAACCTGTTCCTTATCCGATACCTCCATGCCGACCACATGCAACTATTGCACCAAGTGCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352251.8
ENST00000496138.2
ENST00000625998.2
CDS CCA 72 bp TGCATTGTTATAAGCACTTGGTGCAATAGTTGCATGTaGTCGGCATGGAGGTATCGGATAAGGAACAGGTTT +
Preference number: 6 (lower is better)
Translates to: CIVISTWCNSCM*SAWRYRIRNRF
Trigger: AAACCTGTTCCTTATCCGATACCTCCATGCCGACCACATGCAACTATTGCACCAAGTGCTTATAACAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352251.8
ENST00000496138.2
ENST00000625998.2
CDS CAA 90 bp AGTGAAGCCAGCCCACTTGTGACAGCAGAGGATAAAGCAGAGGAGTaGATTAAATTGGTGTCATTGGATGTCAGAAAACCTTTTAACGCA +
Preference number: 6 (lower is better)
Translates to: SEASPLVTAEDKAEE*IKLVSLDVRKPFNA
Trigger: TGCGTTAAAAGGTTTTCTGACATCCAATGACACCAATTTAATCAACTCCTCTGCTTTATCCTCTGCTGTCACAAGTGGGCTGGCTTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS TCA 72 bp TCGGCCCAGGAAAAATATCTCAGCAAATCAACCACCTaGAAACAAAGAACTAACAGCTCTAATGACAGCATG +
Preference number: 6 (lower is better)
Translates to: SAQEKYLSKSTT*KQRTNSSNDSM
Trigger: CATGCTGTCATTAGAGCTGTTAGTTCTTTGTTTTCAGGTGGTTGATTTGCTGAGATATTTTTCCTGGGCCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436678.1
CDS CAA 90 bp GCTATTAATGACCCTGGGAGAGATACTGACGGATTAAGAGATGGGTaGCCAGTTAAAGGAAAATTGTTGGTCAAAGAAGTAAAAGAAGGA +
Preference number: 6 (lower is better)
Translates to: AINDPGRDTDGLRDG*PVKGKLLVKEVKEG
Trigger: TCCTTCTTTTACTTCTTTGACCAACAATTTTCCTTTAACTGGCAACCCATCTCTTAATCCGTCAGTATCTCTCCCAGGGTCATTAATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352251.8
ENST00000625998.2
CDS CAA 90 bp AACAGTTCAAGAGCAACTAGTTTGTCTTTACTGAAAGTGAAACAGTaGAGTATATTGACCACTTCTGTTGGCTGGACAGCCACCATTTTA +
Preference number: 6 (lower is better)
Translates to: NSSRATSLSLLKVKQ*SILTTSVGWTATIL
Trigger: TAAAATGGTGGCTGTCCAGCCAACAGAAGTGGTCAATATACTCAACTGTTTCACTTTCAGTAAAGACAAACTAGTTGCTCTTGAACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352251.8
ENST00000418503.1
ENST00000436678.1
ENST00000602534.1
ENST00000625998.2
CDS CCA 72 bp GGAGCTTACCTAAGTAACAAAAAGCATTCAAAGCACTaGTCTTTAGAAAACTGGAAGTATCTGAAGCTAAGC +
Preference number: 6 (lower is better)
Translates to: GAYLSNKKHSKH*SLENWKYLKLS
Trigger: GCTTAGCTTCAGATACTTCCAGTTTTCTAAAGACCAGTGCTTTGAATGCTTTTTGTTACTTAGGTAAGCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484434.3
CDS CCA 72 bp AGGTTTTACAATCTCAAATTACGCAAGAACTCCCAATaGCAACATCCTCCTAAACTGATAGGAATTCATCCT +
Preference number: 6 (lower is better)
Translates to: RFYNLKLRKNSQ*QHPPKLIGIHP
Trigger: AGGATGAATTCCTATCAGTTTAGGAGGATGTTGCCATTGGGAGTTCTTGCGTAATTTGAGATTGTAAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484434.3
CDS CAA 72 bp ATAAATGTGGTTGCTATTAAATTCCAAATGCAGATCTaGCCAAAGATGGCCATAGAGGTGGCCAGAGATTTT +
Preference number: 6 (lower is better)
Translates to: INVVAIKFQMQI*PKMAIEVARDF
Trigger: AAAATCTCTGGCCACCTCTATGGCCATCTTTGGCAAGATCTGCATTTGGAATTTAATAGCAACCACATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484434.3
CDS CCA 72 bp AACAAAAAGCATTCAAAGCACTGGTCTTTAGAAAACTaGAAGTATCTGAAGCTAAGCCAGATGCTGTACTTT +
Preference number: 6 (lower is better)
Translates to: NKKHSKHWSLEN*KYLKLSQMLYF
Trigger: AAAGTACAGCATCTGGCTTAGCTTCAGATACTTCCAGTTTTCTAAAGACCAGTGCTTTGAATGCTTTTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484434.3
CDS CAA 90 bp TGTGCATCAATAATGTTCGAGGCTAACAGTTCAAGAGCAACTAGTTaGTCTTTACTGAAAGTGAAACAGTTGAGTATATTGACCACTTCT +
Preference number: 6 (lower is better)
Translates to: CASIMFEANSSRATS*SLLKVKQLSILTTS
Trigger: AGAAGTGGTCAATATACTCAACTGTTTCACTTTCAGTAAAGACAAACTAGTTGCTCTTGAACTGTTAGCCTCGAACATTATTGATGCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352251.8
ENST00000418503.1
ENST00000436678.1
ENST00000625998.2
CDS TCA 72 bp TTATATGGAGGTTTATGTCTAGAGTTAAGTGAAAACTaGCACCAAATGAAACAACCAGAGATTCCTATTTCC +
Preference number: 6 (lower is better)
Translates to: LYGGLCLELSEN*HQMKQPEIPIS
Trigger: GGAAATAGGAATCTCTGGTTGTTTCATTTGGTGTCAGTTTTCACTTAACTCTAGACATAAACCTCCATATAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602512.1
CDS CAA 72 bp ATAATGTTCGAGGCTAACAGTTCAAGAGCAACTAGTTaGTCTTTACTGAAAGTGAAACAGTTGAGTATATTG +
Preference number: 6 (lower is better)
Translates to: IMFEANSSRATS*SLLKVKQLSIL
Trigger: CAATATACTCAACTGTTTCACTTTCAGTAAAGACAAACTAGTTGCTCTTGAACTGTTAGCCTCGAACATTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352251.8
ENST00000418503.1
ENST00000436678.1
ENST00000625998.2
CDS CAA 72 bp AATACTTACGAGGCTAACAGTTCAAGAGCAACTAGTTaGTCTTTACTGAAAGTGAAACAGTTGAGTATATTG +
Preference number: 6 (lower is better)
Translates to: NTYEANSSRATS*SLLKVKQLSIL
Trigger: CAATATACTCAACTGTTTCACTTTCAGTAAAGACAAACTAGTTGCTCTTGAACTGTTAGCCTCGTAAGTATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602534.1