RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRORP (Homo sapiens)

Ensembl gene IDs: ENSG00000100890

Ensembl transcript IDs: ENST00000250377.11, ENST00000321130.14, ENST00000534898.9, ENST00000557404.3, ENST00000603544.5, ENST00000603588.1, ENST00000603611.5, ENST00000604948.5, ENST00000605201.1, ENST00000605870.5

Found 560 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAATCCCTGCACTCCTCAAGGTCACCGTGGCAGTATGACTTATGCTaGGCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGAT +
Preference number: 1 (lower is better)
Translates to: ESLHSSRSPWQYDLC*ATLQWFPTPGQGTD
Trigger: ATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTGCAGGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR TCA 90 bp TTCCTTCAGGGAATCCCTGCACTCCTCAAGGTCACCGTGGCAGTATaGCTTATGCTGAGCAACCCTACAATGGTTCCCCACTCCTGGACA +
Preference number: 1 (lower is better)
Translates to: FLQGIPALLKVTVAV*LMLSNPTMVPHSWT
Trigger: TGTCCAGGAGTGGGGAACCATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTGCAGGGATTCCCTGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR TCA 90 bp TGCACTCCTCAAGGTCACCGTGGCAGTATGACTTATGCTGAGCAACCCTACAATGGCTCATTGCAGCCTTaGCCTCTGAGGCTCAAGCAA +
Preference number: 2 (lower is better)
Translates to: CTPQGHRGSMTYAEQPYNGSLQP*PLRLKQ
Trigger: TTGCTTGAGCCTCAGAGGTCAAGGCTGCAATGAGCC...ATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR TCA 90 bp ATCAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGGTCACCGTGGCAGTATaGCTTATGCTGAGCAACCCT +
Preference number: 2 (lower is better)
Translates to: IRTQMGSLSVWYQLLPSGVTVAV*LMLSNP
Trigger: AGGGTTGCTCAGCATAAGTCATACTGCCACGGTGAC...CCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR CCA 90 bp TGCACTCCTCAAGGTCACCGTGGCAGTATGACTTATGCTGAGCAACCCTACAATACTGAGGCCAGGGGTTaGAGACTAGTCTTGTCAACA +
Preference number: 2 (lower is better)
Translates to: CTPQGHRGSMTYAEQPYNTEARG*RLVLST
Trigger: TGTTGACAAGACTAGTCTCCAACCCCTGGCCTCAGT...ATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR CCA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTAGCCCCCAAAGTAGCTaGGACTATGTGTGCAAACTA +
Preference number: 2 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFSPQSS*DYVCKL
Trigger: TAGTTTGCACACATAGTCCCAGCTACTTTGGGGGCT...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR TCA 90 bp ATCAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGACAGAGGACGATAAATaGTTCCATGTGGATAGGGCA +
Preference number: 2 (lower is better)
Translates to: IRTQMGSLSVWYQLLPSGTEDDK*FHVDRA
Trigger: TGCCCTATCCACATGGAATCATTTATCGTCCTCTGT...CCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR GCA 90 bp CCAGGTCATCTTCCTGGGTCTGTTCCTCATCTCCAAAATGGACTTTACATGCTCTTCAATCTCCCAAATTaGTGGGGATCGACTGAGGCC +
Preference number: 2 (lower is better)
Translates to: PGHLPGSVPHLQNGLYMLFNLPN*WGSTEA
Trigger: GGCCTCAGTCGATCCCCAGCAATTTGGGAGATTGAA...GAGCATGTAAAGTCCATTTTGGAGATGAGGAACAGACCCAGGAAGATGACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR GCA 90 bp CCAGGTCATCTTCCTGGGTCTGTTCCTCATCTCCAAAATGGACTTTACATGCTCAGCTGGGACTATGTGTaGAAACTACCATGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: PGHLPGSVPHLQNGLYMLSWDYV*KLPCLA
Trigger: AGCCAGGCATGGTAGTTTGCACACATAGTCCCAGCT...GAGCATGTAAAGTCCATTTTGGAGATGAGGAACAGACCCAGGAAGATGACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR TCA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTAATGTTCTATACTGCTaGGCCATTCAGGATACTTGG +
Preference number: 2 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFNVLYC*AIQDTW
Trigger: CCAAGTATCCTGAATGGCTCAGCAGTATAGAACATT...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR CCA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTAGACTATGCCAGAAATaGGAGGAGGCATTTGAAACA +
Preference number: 2 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFRLCQK*EEAFET
Trigger: TGTTTCAAATGCCTCCTCCCATTTCTGGCATAGTCT...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR CAA 90 bp AATGGAACTTCCTTTGTTTATTTAGCACAGACTCAAGCAGACTGCTaGTCACTGGCCAGGACTGGGCAGGTAAAAGCTGGTCCTATTTCC +
Preference number: 2 (lower is better)
Translates to: NGTSFVYLAQTQADC*SLARTGQVKAGPIS
Trigger: GGAAATAGGACCAGCTTTTACCTGCCCAGTCCTGGCCAGTGACAAGCAGTCTGCTTGAGTCTGTGCTAAATAAACAAAGGAAGTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR TCA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTAGAAGTTTAGCTCACTaGAAGCACAGTTTCCTAAGT +
Preference number: 2 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFRSLAH*KHSFLS
Trigger: ACTTAGGAAACTGTGCTTTCAGTGAGCTAAACTTCT...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR GCA 90 bp TGCACTCCTCAAGGTCACCGTGGCAGTATGACTTATGCTGAGCAACCCTACAATTCTTTTGTCTTGGTGTaGAGTAATGTTGCATTCAGT +
Preference number: 2 (lower is better)
Translates to: CTPQGHRGSMTYAEQPYNSFVLV*SNVAFS
Trigger: ACTGAATGCAACATTACTGCACACCAAGACAAAAGA...ATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR CAA 90 bp GAGCCACCACTTCGGCCTCCTCCTCTATCTCTATGTGCTCCTTTTTaGGGAATTTGCATTAGCCTTTTAGATGGGCTTAATAAATACTTT +
Preference number: 2 (lower is better)
Translates to: EPPLRPPPLSLCAPF*GICISLLDGLNKYF
Trigger: AAAGTATTTATTAAGCCCATCTAAAAGGCTAATGCAAATTCCCAAAAAAGGAGCACATAGAGATAGAGGAGGAGGCCGAAGTGGTGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR CCA 90 bp AAAGAAAGAACTATCATGAAGGGGTGCAGACATGAATATTTTCAGCTGAAATCAACTGCACTCCAGCCCTaGCGACAGAGTAAGTTGAGA +
Preference number: 2 (lower is better)
Translates to: KERTIMKGCRHEYFQLKSTALQP*RQSKLR
Trigger: TCTCAACTTACTCTGTCGCCAGGGCTGGAGTGCAGT...TGATTTCAGCTGAAAATATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR GCA 90 bp AAAGAAAGAACTATCATGAAGGGGTGCAGACATGAATATTTTCAGCTGAAATCACAGAGAATGAGACTATaGCAGAAATGGGAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: KERTIMKGCRHEYFQLKSQRMRL*QKWEEA
Trigger: TGCCTCCTCCCATTTCTGGCATAGTCTCATTCTCTG...TGATTTCAGCTGAAAATATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR TCA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGATGGGAGGAGGCATTTaGAACAACATGAGTATCTCA +
Preference number: 2 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQMGGGI*NNMSIS
Trigger: TGAGATACTCATGTTGTTTCAAATGCCTCCTCCCAT...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
3UTR-3UTR TCA 90 bp AAAGAAAGAACTATCATGAAGGGGTGCAGACATGAATATTTTCAGCTGAAATCAACAGAGGACGATAAATaGTTCCATGTGGATAGGGCA +
Preference number: 2 (lower is better)
Translates to: KERTIMKGCRHEYFQLKSTEDDK*FHVDRA
Trigger: TGCCCTATCCACATGGAATCATTTATCGTCCTCTGT...TGATTTCAGCTGAAAATATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR TCA 72 bp GGAATCCCTGCACTCCTCAAGGTCACCGTGGCAGTATaGCTTATGCTGAGCAACCCTACAATGGTTCCCCAC +
Preference number: 3 (lower is better)
Translates to: GIPALLKVTVAV*LMLSNPTMVPH
Trigger: GTGGGGAACCATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTGCAGGGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR CAA 90 bp ATCAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGTGCAGTGGTGCAACGTaGGCTCATTGCAGCCTTGAC +
Preference number: 3 (lower is better)
Translates to: IRTQMGSLSVWYQLLPSGCSGAT*AHCSLD
Trigger: GTCAAGGCTGCAATGAGCCAACGTTGCACCACTGCA...CCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR TCA 72 bp CACTCCTCAAGGTCACCGTGGCAGTATGACTTATGCTaGGCAACCCTACAATGGTTCCCCACTCCTGGACAA +
Preference number: 3 (lower is better)
Translates to: HSSRSPWQYDLC*ATLQWFPTPGQ
Trigger: TTGTCCAGGAGTGGGGAACCATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR CCA 72 bp ACAGACTCAAGCAGACTGCTTGTCACTGGCCAGGACTaGGCAGGTAAAAGCTGGTCCTATTTCCTTTCTGCT +
Preference number: 3 (lower is better)
Translates to: TDSSRLLVTGQD*AGKSWSYFLSA
Trigger: AGCAGAAAGGAAATAGGACCAGCTTTTACCTGCCCAGTCCTGGCCAGTGACAAGCAGTCTGCTTGAGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR CAA 90 bp CCAGGTCATCTTCCTGGGTCTGTTCCTCATCTCCAAAATGGACTTTACATGCTCGGATTGATTCTGCTATaGGTAGGCCTGGAAGGCAAG +
Preference number: 3 (lower is better)
Translates to: PGHLPGSVPHLQNGLYMLGLILL*VGLEGK
Trigger: CTTGCCTTCCAGGCCTACCAATAGCAGAATCAATCC...GAGCATGTAAAGTCCATTTTGGAGATGAGGAACAGACCCAGGAAGATGACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR CAA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTGAGAGCTCTTTTGTCTaGGTGTGCAGTAATGTTGCA +
Preference number: 3 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFESSFV*VCSNVA
Trigger: TGCAACATTACTGCACACCAAGACAAAAGAGCTCTC...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR TCA 72 bp GGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTaGTGCCAACCTAGAGGGTACCCAAACACAAACTTA +
Preference number: 3 (lower is better)
Translates to: GNALNKHQLKSL*CQPRGYPNTNL
Trigger: TAAGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
3UTR CCA 72 bp CTTATGCTGAGCAACCCTACAATGGTTCCCCACTCCTaGACAAGGGACAGATGCACTTCAGTTTATCTCAAG +
Preference number: 3 (lower is better)
Translates to: LMLSNPTMVPHS*TRDRCTSVYLK
Trigger: CTTGAGATAAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGCTCAGCATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR CAA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTTGGCGACAGAGTAAGTaGAGACTCTATTTCCAAAAA +
Preference number: 3 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFWRQSK*RLYFQK
Trigger: TTTTTGGAAATAGAGTCTCAACTTACTCTGTCGCCA...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR CAA 90 bp ATCAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGCTATGTGCTCCTTTTTaGGGAATTTGCATTAGCCTT +
Preference number: 3 (lower is better)
Translates to: IRTQMGSLSVWYQLLPSGLCAPF*GICISL
Trigger: AAGGCTAATGCAAATTCCCAAAAAAGGAGCACATAG...CCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR GCA 72 bp ACTTCCTTTGTTTATTTAGCACAGACTCAAGCAGACTaGTTGTCACTGGCCAGGACTGGGCAGGTAAAAGCT +
Preference number: 3 (lower is better)
Translates to: TSFVYLAQTQAD*LSLARTGQVKA
Trigger: AGCTTTTACCTGCCCAGTCCTGGCCAGTGACAAGCAGTCTGCTTGAGTCTGTGCTAAATAAACAAAGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR CCA 72 bp AAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTaGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACAC +
Preference number: 3 (lower is better)
Translates to: KALLVTQAKWNS*PSRRNAGFALH
Trigger: GTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
3UTR CCA 72 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTaGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTT +
Preference number: 3 (lower is better)
Translates to: WIPKALLVTQAK*NSWPSRRNAGF
Trigger: AAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
3UTR-3UTR CAA 90 bp AAAGAAAGAACTATCATGAAGGGGTGCAGACATGAATATTTTCAGCTGAAATCATGGCTCATTGCAGCCTaGACCTCTGAGGCTCAAGCA +
Preference number: 3 (lower is better)
Translates to: KERTIMKGCRHEYFQLKSWLIAA*TSEAQA
Trigger: TGCTTGAGCCTCAGAGGTCAAGGCTGCAATGAGCCA...TGATTTCAGCTGAAAATATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR-3UTR CAA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGGGATTGATTCTGCTATaGGTAGGCCTGGAAGGCAAG +
Preference number: 3 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQGLILL*VGLEGK
Trigger: CTTGCCTTCCAGGCCTACCAATAGCAGAATCAATCC...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
3UTR-3UTR CAA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGAGGAGAAATGCAGGTTTaGCTCTACACTAAGTTCTCC +
Preference number: 3 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRGEMQV*LYTKFS
Trigger: GGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCC...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
3UTR CCA 72 bp GCCAGTTTATTACAGAGGACGATAAATGATTCCATGTaGATAGGGCATAACATACAGAGAATGAGACTATGC +
Preference number: 3 (lower is better)
Translates to: ASLLQRTINDSM*IGHNIQRMRLC
Trigger: GCATAGTCTCATTCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR CCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCGCAAAACTCCTCCGGTaGGGGGACGAGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTAKLLR*GDEEGG
Trigger: TCCTCCCTCCTCGTCCCCCCACCGGAGGAGTTTTGC...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321130.14
ENST00000603544.5
CDS-3UTR GCA 90 bp ATCAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGAGGTGTGGGCCACCATaGCCTGACTCCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: IRTQMGSLSVWYQLLPSGRCGPP*PDSSPI
Trigger: GATGGGGGAGGAGTCAGGGCATGGTGGCCCACACCT...CCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCCGAGGAGGGAGGAGGTaGCGAGTCAGCTGCGCCAAC +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLRGGRR*RVSCAN
Trigger: GTTGGCGCAGCTGACTCGCCACCTCCTCCCTCCTCG...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321130.14
CDS-3UTR CCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCGAGGAGGGAGGAGGTaGCGAGTCAGCTGCGCCAAC +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMRGGRR*RVSCAN
Trigger: GTTGGCGCAGCTGACTCGCCACCTCCTCCCTCCTCG...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321130.14
ENST00000603544.5
CDS-3UTR GCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAAGGTGTGGGCCACCATaGCCTGACTCCTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQRCGPP*PDSSPI
Trigger: GATGGGGGAGGAGTCAGGGCATGGTGGCCCACACCT...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACCTCTGCTGGTTCCTaGTGCCACAGCGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQTSAGS*CHSGLP
Trigger: TGGCAGACCGCTGTGGCATCAGGAACCAGCAGAGGT...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR GCA 90 bp ATCAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGGCCTGTAATTCCAGCTaGCCGAGAGGCAGAGGCATG +
Preference number: 4 (lower is better)
Translates to: IRTQMGSLSVWYQLLPSGACNSS*PRGRGM
Trigger: CATGCCTCTGCCTCTCGGGCAGCTGGAATTACAGGC...CCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAGGCAGACAGGCCTTGTaGTCCCGCATCAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPGRQAL*SRIRSL
Trigger: AAGAGACCTGATGCGGGACCACAAGGCCTGTCTGCC...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTGCAAAACTCCTCCGGTaGGGGGACGAGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSAKLLR*GDEEGG
Trigger: TCCTCCCTCCTCGTCCCCCCACCGGAGGAGTTTTGC...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000321130.14
CDS-3UTR TCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCACAGCTCAAGAGCCTCTaGTGCCAACCTAGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPQLKSL*CQPRGY
Trigger: GTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTG...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAACTCCGTCTTAGCATGTaGTTCCGGCCTAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQLRLSM*FRPRTS
Trigger: GCTGGTCCTAGGCCGGAAGCACATGCTAAGACGGAG...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTCTCCGTCTTAGCATGTaGTTCCGGCCTAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTLRLSM*FRPRTS
Trigger: GCTGGTCCTAGGCCGGAAGCACATGCTAAGACGGAG...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCGAAAACAACCTCTGCTaGTTCCTGATGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTENNLC*FLMPQR
Trigger: CCGCTGTGGCATCAGGAACCAGCAGAGGTTGTTTTC...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR CCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAGGCAGACAGGCCTTGTaGTCCCGCATCAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQGRQAL*SRIRSL
Trigger: AAGAGACCTGATGCGGGACCACAAGGCCTGTCTGCC...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGGGCAGACAGGCCTTGTaGTCCCGCATCAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMGRQAL*SRIRSL
Trigger: AAGAGACCTGATGCGGGACCACAAGGCCTGTCTGCC...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCCAGGCTAGAGTGCAGTaGTGCAACGTTGGCTCATTG +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTQARVQ*CNVGSL
Trigger: CAATGAGCCAACGTTGCACCACTGCACTCTAGCCTG...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCGGCCTCCCAAAGTGCTaGAACTGTAGGTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLGLPKC*NCRCGP
Trigger: TGGCCCACACCTACAGTTCCAGCACTTTGGGAGGCC...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCGTCACTGGCCAGGACTaGGCAGGTAAAAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLVTGQD*AGKSWS
Trigger: GGACCAGCTTTTACCTGCCCAGTCCTGGCCAGTGAC...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCCCGAACACTGGCCAGTaGATCACAGCTGTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTPNTGQ*ITAVLK
Trigger: TTTCAGGACAGCTGTGATCCACTGGCCAGTGTTCGG...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321130.14
CDS-3UTR TCA 90 bp ATCAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGTTACCTCCCTCCCTTTaGGACAGGGTCTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: IRTQMGSLSVWYQLLPSGLPPSL*DRVSLC
Trigger: ACAGAGTGAGACCCTGTCTCAAAGGGAGGGAGGTAA...CCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGATTGGGGGTCGGCGGTaGAGAGTCGAAGTGGAACTT +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMIGGRR*RVEVEL
Trigger: AAGTTCCACTTCGACTCTGCACCGCCGACCCCCAAT...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR GCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAGATGCCACAGCGGTCTaGCAGAAACAGCGAGACATA +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPDATAV*QKQRDI
Trigger: TATGTCTCGCTGTTTCTGGCAGACCGCTGTGGCATC...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR GCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCCAGCTGGCTTGCTTTTaGACCTCTTCCATCTCATCC +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTQLACF*TSSISS
Trigger: GGATGAGATGGAAGAGGTGCAAAAGCAAGCCAGCTG...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp CCAGGTCATCTTCCTGGGTCTGTTCCTCATCTCCAAAATGGACTTTACATGCTCGCCTGTAATTCCAGCTaGCCGAGAGGCAGAGGCATG +
Preference number: 4 (lower is better)
Translates to: PGHLPGSVPHLQNGLYMLACNSS*PRGRGM
Trigger: CATGCCTCTGCCTCTCGGGCAGCTGGAATTACAGGC...GAGCATGTAAAGTCCATTTTGGAGATGAGGAACAGACCCAGGAAGATGACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp ATCAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGGAAAACAACCTCTGCTaGTTCCTGATGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: IRTQMGSLSVWYQLLPSGENNLC*FLMPQR
Trigger: CCGCTGTGGCATCAGGAACCAGCAGAGGTTGTTTTC...CCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp CAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGAACCACAGCCCGAACACTaGCCACTCTCAAACCATGTT +
Preference number: 4 (lower is better)
Translates to: QNTNGQPKCLVPAASFREPQPEH*PLSNHV
Trigger: AACATGGTTTGAGAGTGGCCAGTGTTCGGGCTGTGG...TTCCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250377.11
CDS-3UTR CCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTCCCGGAGTGCAGTGTaGCATACAGAAGGAATGGAT +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTSRSAV*HTEGMD
Trigger: ATCCATTCCTTCTGTATGCCACACTGCACTCCGGGA...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCACTGAGGCCAGGGGTTaGAGACTAGTCTTGTCAACA +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTTEARG*RLVLST
Trigger: TGTTGACAAGACTAGTCTCCAACCCCTGGCCTCAGT...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp ATCAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGCTATGTTGCCCAGGTTaGTCTCCAACTCTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: IRTQMGSLSVWYQLLPSGLCCPG*SPTLGL
Trigger: TAGGCCCAGAGTTGGAGACCAACCTGGGCAACATAG...CCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCACTATGTTGCCCAGGTTaGTCTCCAACTCTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPLCCPG*SPTLGL
Trigger: TAGGCCCAGAGTTGGAGACCAACCTGGGCAACATAG...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAGCCAGGTCATCTTCCTaGGTCTGTTCCTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPARSSS*VCSSSP
Trigger: TGGAGATGAGGAACAGACCCAGGAAGATGACCTGGC...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTATGGTTCCCCACTCCTaGACAAGGGACAGATGCACT +
Preference number: 4 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFMVPHS*TRDRCT
Trigger: AGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCAT...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp CAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGAAGGCAGCCTAAGTGTCTaGTACCAGCTGCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QNTNGQPKCLVPAASFREGSLSV*YQLLPS
Trigger: TGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCC...TTCCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAACCACGGGAAGCTTGCTaGAAAGGGGGTGTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQPREAC*KGGVKP
Trigger: TGGCTTTACACCCCCTTTCCAGCAAGCTTCCCGTGG...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321130.14
ENST00000605870.5
CDS-3UTR CCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTCCACAGCCCGAACACTaGCCACTTTTTCGGACTGTG +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTPQPEH*PLFRTV
Trigger: CACAGTCCGAAAAAGTGGCCAGTGTTCGGGCTGTGG...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp CAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGAATGCCCTCATCTTTCCTaGGATATCTGGCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: QNTNGQPKCLVPAASFRECPHLS*DIWPWQ
Trigger: TTGCCAAGGCCAGATATCTCAGGAAAGATGAGGGCA...TTCCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCATGCCCTCATCTTTCCTaGGATATCTGGCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPCPHLS*DIWPWQ
Trigger: TTGCCAAGGCCAGATATCTCAGGAAAGATGAGGGCA...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR TCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCGGTTGTGTTGGGAGTTaGATAGTGTTCCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTGCVGS*IVFLTG
Trigger: ACCTGTGAGGAACACTATTCAACTCCCAACACAACC...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR TCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTTCTCTCCATCTGTCTaGATGGATCAATCCCCGGAT +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTFSPSV*MDQSPD
Trigger: ATCCGGGGATTGATCCATTCAGACAGATGGAGAGAA...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR TCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTATACTGTGTGCAAATaGCTCCCCTGGATACAGCTG +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTYTVCK*LPWIQL
Trigger: CAGCTGTATCCAGGGGAGTCATTTGCACACAGTATA...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR TCA 90 bp TGCACTCCTCAAGGTCACCGTGGCAGTATGACTTATGCTGAGCAACCCTACAATGTGATAAACCTGCAGTaGTTCCCGGAGTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CTPQGHRGSMTYAEQPYNVINLQ*FPECSV
Trigger: CACACTGCACTCCGGGAATCACTGCAGGTTTATCAC...ATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGGTGATAAACCTGCAGTaGTTCCCGGAGTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMVINLQ*FPECSV
Trigger: CACACTGCACTCCGGGAATCACTGCAGGTTTATCAC...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAGTGATAAACCTGCAGTaGTTCCCGGAGTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQVINLQ*FPECSV
Trigger: CACACTGCACTCCGGGAATCACTGCAGGTTTATCAC...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTCAGCTCAAGAGCCTCTaGTGCCAACCTAGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSQLKSL*CQPRGY
Trigger: GTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTG...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR TCA 90 bp CCAGGTCATCTTCCTGGGTCTGTTCCTCATCTCCAAAATGGACTTTACATGCTCCTGAGGTCAGGAGTTTaGGAGCAACCGGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: PGHLPGSVPHLQNGLYMLLRSGV*EQPGQH
Trigger: ATGTTGCCCCGGTTGCTCTCAAACTCCTGACCTCAG...GAGCATGTAAAGTCCATTTTGGAGATGAGGAACAGACCCAGGAAGATGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTTACATTCCAGTTCATaGACCACCAACAGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTLHSSS*TTNSGE
Trigger: TTCGCCGCTGTTGGTGGTTCATGAACTGGAATGTAA...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603544.5
CDS-3UTR GCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCGCAGGAATCCTCTGGTaGCTCTTACATTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTAGILW*LLHSSS
Trigger: TGAACTGGAATGTAAGAGGCACCAGAGGATTCCTGC...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR GCA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTATTGGGGGTCGGCGGTaGAGAGTCGAAGTGGAACTT +
Preference number: 4 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSIGGRR*RVEVEL
Trigger: AAGTTCCACTTCGACTCTGCACCGCCGACCCCCAAT...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTGATGCCACAGCGGTCTaGCAGAAACAGCGAGACATA +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTDATAV*QKQRDI
Trigger: TATGTCTCGCTGTTTCTGGCAGACCGCTGTGGCATC...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR GCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAGATGCCACAGCGGTCTaGCAGAAACAGCGAGACATA +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQDATAV*QKQRDI
Trigger: TATGTCTCGCTGTTTCTGGCAGACCGCTGTGGCATC...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR GCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCAGAGAAAACAACCTCTaGTGGTTCCTGATGCCACAG +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTRENNL*WFLMPQ
Trigger: CTGTGGCATCAGGAACCAGCAGAGGTTGTTTTCTCT...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR GCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCAGTGTTCCTCACAGGTaGCAAGGCATGATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTSVPHR*QGMIFS
Trigger: ACTGAAGATCATGCCTTGGCACCTGTGAGGAACACT...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR GCA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTTTTGGCTGCTACCCATaGCAGCAGAGATTTAGCCAC +
Preference number: 4 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFFGCYP*QQRFSH
Trigger: GTGGCTAAATCTCTGCTGGCATGGGTAGCAGCCAAA...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCCTCCGTCTTAGCATGTaGTTCCGGCCTAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLLRLSM*FRPRTS
Trigger: GCTGGTCCTAGGCCGGAAGCACATGCTAAGACGGAG...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAATTTGGCCTCCCAAAGTaGTGGAACTGTAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQFGLPK*WNCRCG
Trigger: CCCACACCTACAGTTCCAGCACTTTGGGAGGCCAAA...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp ATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACAGGTGGCGAGTCAGCTaGGCCAACGACTCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: IAGPVGEMQVLLYTKFSNRWRVS*ANDSGK
Trigger: CTTTCCTGAGTCGTTGGCGCAGCTGACTCGCCACCT...GTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321130.14
CDS-3UTR GCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTTTCCCACGGGAAGCTTaGTGGAAAGGGGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTFPREA*WKGGVK
Trigger: CTTTACACCCCCTTTCCAGCAAGCTTCCCGTGGGAA...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321130.14
ENST00000605870.5
CDS-3UTR GCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGTTCCCACGGGAAGCTTaGTGGAAAGGGGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMFPREA*WKGGVK
Trigger: CTTTACACCCCCTTTCCAGCAAGCTTCCCGTGGGAA...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321130.14
ENST00000605870.5
CDS-3UTR CCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCAGAGCAGGAATCCTCTaGTGCCTCTTACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTRAGIL*CLLHSS
Trigger: ACTGGAATGTAAGAGGCACCAGAGGATTCCTGCTCT...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR CCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTGAAAACAACCTCTGCTaGTTCCTGATGCCACAGCGG +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTENNLC*FLMPQR
Trigger: CCGCTGTGGCATCAGGAACCAGCAGAGGTTGTTTTC...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR CCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCACAGCCCGAACACTaGCCACTCTCAAACCATGTT +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMPQPEH*PLSNHV
Trigger: AACATGGTTTGAGAGTGGCCAGTGTTCGGGCTGTGG...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000603544.5
CDS-3UTR CCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCGTCGCAGATTCCGTTTaGCTAGTTGAGAGACGACAT +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTVADSV*LVERRH
Trigger: ATGTCGTCTCTCAACTAGCCAAACGGAATCTGCGAC...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTCATCCCGACTCCACTaGGAACTCCGTCTTAGCATG +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLSSRLH*ELRLSM
Trigger: CATGCTAAGACGGAGTTCCCAGTGGAGTCGGGATGA...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGTCATCCCGACTCCACTaGGAACTCCGTCTTAGCATG +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMSSRLH*ELRLSM
Trigger: CATGCTAAGACGGAGTTCCCAGTGGAGTCGGGATGA...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCATCCCGGAGTGCAGTGTaGCATACAGAAGGAATGGAT +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPSRSAV*HTEGMD
Trigger: ATCCATTCCTTCTGTATGCCACACTGCACTCCGGGA...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTGTCACCCAAGCTAAGTaGAATAGCTGGCCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTVTQAK*NSWPSR
Trigger: CCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGAC...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAGTCACCCAAGCTAAGTaGAATAGCTGGCCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQVTQAK*NSWPSR
Trigger: CCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGAC...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCACTGCACTCCAGCCCTaGCGACAGAGTAAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLTALQP*RQSKLR
Trigger: TCTCAACTTACTCTGTCGCCAGGGCTGGAGTGCAGT...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTGCCAGGTCATCTTCCTaGGTCTGTTCCTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTARSSS*VCSSSP
Trigger: TGGAGATGAGGAACAGACCCAGGAAGATGACCTGGC...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TGCACTCCTCAAGGTCACCGTGGCAGTATGACTTATGCTGAGCAACCCTACAATGGCAGCCTAAGTGTCTaGTACCAGCTGCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: CTPQGHRGSMTYAEQPYNGSLSV*YQLLPS
Trigger: TGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCC...ATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAACCTCTGCTGGTTCCTaGTGCCACAGCGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQTSAGS*CHSGLP
Trigger: TGGCAGACCGCTGTGGCATCAGGAACCAGCAGAGGT...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCACAGCCAGCCATCTGTaGAATGATCCAACTTTCGAA +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTTASHL*NDPTFE
Trigger: TTCGAAAGTTGGATCATTTCACAGATGGCTGGCTGT...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR TCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCATTCTCTCCATCTGTCTaGATGGATCAATCCCCGGAT +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPFSPSV*MDQSPD
Trigger: ATCCGGGGATTGATCCATTCAGACAGATGGAGAGAA...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR TCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCCCACTGTGTCATAGCTaGGAATACGCTGAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTPLCHS*EYAERL
Trigger: TAACCTTTCAGCGTATTCTCAGCTATGACACAGTGG...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCAGCTCAAGAGCCTCTaGTGCCAACCTAGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSQLKSL*CQPRGY
Trigger: GTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTG...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTCAGCTCAAGAGCCTCTaGTGCCAACCTAGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: WIPKALLVTQAKWNSWPSQLKSL*CQPRGY
Trigger: GTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTG...ACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR TCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCCAGTATGACTTATGCTaGGCAACCCTACAATGGTTC +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTQYDLC*ATLQWF
Trigger: GAACCATTGTAGGGTTGCTCAGCATAAGTCATACTG...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTCGAGAGGCAGAGGCATaGGAATTGCTTGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: WIPKALLVTQAKWNSWPSREAEA*ELLEPR
Trigger: CCTGGGTTCAAGCAATTCTCATGCCTCTGCCTCTCG...ACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCCGAGAGGCAGAGGCATaGGAATTGCTTGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLREAEA*ELLEPR
Trigger: CCTGGGTTCAAGCAATTCTCATGCCTCTGCCTCTCG...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp ATCAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGGCAGGAATCCTCTGGTaGCTCTTACATTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: IRTQMGSLSVWYQLLPSGAGILW*LLHSSS
Trigger: TGAACTGGAATGTAAGAGGCACCAGAGGATTCCTGC...CCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAAGTGTTCCTCACAGGTaGCAAGGCATGATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPSVPHR*QGMIFS
Trigger: ACTGAAGATCATGCCTTGGCACCTGTGAGGAACACT...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR GCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAATTTGGCTGCTACCCATaGCAGCAGAGATTTAGCCAC +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQFGCYP*QQRFSH
Trigger: GTGGCTAAATCTCTGCTGGCATGGGTAGCAGCCAAA...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR GCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCACCATTATTTTTGGCTaGTACCCATGCCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTTIIFG*YPCQQR
Trigger: TCTCTGCTGGCATGGGTAGCAGCCAAAAATAATGGT...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR GCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCACAGAGAATGAGACTATaGCAGAAATGGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPQRMRL*QKWEEA
Trigger: TGCCTCCTCCCATTTCTGGCATAGTCTCATTCTCTG...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR GCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGGGGCGCTGCCTAGACTaGGTACCGAACGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKGRCLD*VPNADK
Trigger: TTTGTCAGCGTTCGGTACGCAGTCTAGGCAGCGCCC...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000321130.14
CDS-3UTR GCA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGGTACAGGAAGGGCGCTaGCTAGACTGCGTACCGAAC +
Preference number: 4 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQEVQEGR*LDCVPN
Trigger: GTTCGGTACGCAGTCTAGGCAGCGCCCTTCCTGTAC...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321130.14
CDS-3UTR CCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAGTCGCAGATTCCGTTTaGCTAGTTGAGAGACGACAT +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPVADSV*LVERRH
Trigger: ATGTCGTCTCTCAACTAGCCAAACGGAATCTGCGAC...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp CCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGATCATCCCGACTCCACTaGGAACTCCGTCTTAGCATG +
Preference number: 4 (lower is better)
Translates to: PKALLVTQAKWNSWPSRRSSRLH*ELRLSM
Trigger: CATGCTAAGACGGAGTTCCCAGTGGAGTCGGGATGA...TCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp TTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGTCATCCCGACTCCACTaGGAACTCCGTCTTAGCATG +
Preference number: 4 (lower is better)
Translates to: LSSGQRQCPKQTPAQEPLSSRLH*ELRLSM
Trigger: CATGCTAAGACGGAGTTCCCAGTGGAGTCGGGATGA...CAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTTCCCGGAGTGCAGTGTaGCATACAGAAGGAATGGAT +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTSRSAV*HTEGMD
Trigger: ATCCATTCCTTCTGTATGCCACACTGCACTCCGGGA...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCCAAGTCTTCATCATATaGTATGTGCCACGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTQVFII*YVPRVS
Trigger: GGAGACTCGTGGCACATACCATATGATGAAGACTTG...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGGGCCTCCCAAAGTGCTaGAACTGTAGGTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQEGLPKC*NCRCGP
Trigger: TGGCCCACACCTACAGTTCCAGCACTTTGGGAGGCC...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp CCAGGTCATCTTCCTGGGTCTGTTCCTCATCTCCAAAATGGACTTTACATGCTCATGGTTCCCCACTCCTaGACAAGGGACAGATGCACT +
Preference number: 4 (lower is better)
Translates to: PGHLPGSVPHLQNGLYMLMVPHS*TRDRCT
Trigger: AGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCAT...GAGCATGTAAAGTCCATTTTGGAGATGAGGAACAGACCCAGGAAGATGACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCCCACGGGAAGCTTGCTaGAAAGGGGGTGTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLPREAC*KGGVKP
Trigger: TGGCTTTACACCCCCTTTCCAGCAAGCTTCCCGTGG...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321130.14
ENST00000605870.5
CDS-3UTR CCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCCACAGCCCGAACACTaGCCACTTTTTCGGACTGTG +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSPQPEH*PLFRTV
Trigger: CACAGTCCGAAAAAGTGGCCAGTGTTCGGGCTGTGG...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTGGTTGTGTTGGGAGTTaGATAGTGTTCCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTGCVGS*IVFLTG
Trigger: ACCTGTGAGGAACACTATTCAACTCCCAACACAACC...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR TCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCACAGCCATCTGTGAAATaGTCCAACTTTCGAAACTGG +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPQPSVK*SNFRNW
Trigger: CCAGTTTCGAAAGTTGGATCATTTCACAGATGGCTG...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR TCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACAGCCAGCCATCTGTaGAATGATCCAACTTTCGAA +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPTASHL*NDPTFE
Trigger: TTCGAAAGTTGGATCATTTCACAGATGGCTGGCTGT...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR TCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACATCTATAGAGCTATaGCAGCCAGCCATCTGTGAA +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPTSIEL*QPAICE
Trigger: TTCACAGATGGCTGGCTGTCATAGCTCTATAGATGT...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR TCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGTTCTCTCCATCTGTCTaGATGGATCAATCCCCGGAT +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMFSPSV*MDQSPD
Trigger: ATCCGGGGATTGATCCATTCAGACAGATGGAGAGAA...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR TCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTTTACAATTGCCAGCTaGTGTCCCTGCTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLFTIAS*CPCCHL
Trigger: TAAGTGGCAGCAGGGACATCAGCTGGCAATTGTAAA...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR TCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGTTTACAATTGCCAGCTaGTGTCCCTGCTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMFTIAS*CPCCHL
Trigger: TAAGTGGCAGCAGGGACATCAGCTGGCAATTGTAAA...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAATTTACAATTGCCAGCTaGTGTCCCTGCTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQFTIAS*CPCCHL
Trigger: TAAGTGGCAGCAGGGACATCAGCTGGCAATTGTAAA...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACAGAGGACGATAAATaGTTCCATGTGGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPTEDDK*FHVDRA
Trigger: TGCCCTATCCACATGGAATCATTTATCGTCCTCTGT...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR TCA 90 bp ATCAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGCAGTATGACTTATGCTaGGCAACCCTACAATGGTTC +
Preference number: 4 (lower is better)
Translates to: IRTQMGSLSVWYQLLPSGQYDLC*ATLQWF
Trigger: GAACCATTGTAGGGTTGCTCAGCATAAGTCATACTG...CCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp ATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACGTCACCGTGGCAGTATaGCTTATGCTGAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: IAGPVGEMQVLLYTKFSNVTVAV*LMLSNP
Trigger: AGGGTTGCTCAGCATAAGTCATACTGCCACGGTGAC...GTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCATAAGCCACCTCAGATaGGGTAGACCCAACAGAGCC +
Preference number: 4 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLISHLR*GRPNRA
Trigger: GGCTCTGTTGGGTCTACCTCATCTGAGGTGGCTTAT...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTGCACTCCAGCCTAGATaGAAAAAGATCAAGACTCTG +
Preference number: 4 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFALQPR*KKIKTL
Trigger: CAGAGTCTTGATCTTTTTTCATCTAGGCTGGAGTGC...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGCTGAGGTCAGGAGTTTaGGAGCAACCGGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKLRSGV*EQPGQH
Trigger: ATGTTGCCCCGGTTGCTCTCAAACTCCTGACCTCAG...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TGCACTCCTCAAGGTCACCGTGGCAGTATGACTTATGCTGAGCAACCCTACAATAGAGAAAACAACCTCTaGTGGTTCCTGATGCCACAG +
Preference number: 4 (lower is better)
Translates to: CTPQGHRGSMTYAEQPYNRENNL*WFLMPQ
Trigger: CTGTGGCATCAGGAACCAGCAGAGGTTGTTTTCTCT...ATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCCTCCGTCTTAGCATGTaGTTCCGGCCTAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: IESFYLQDRGNALNKHQLLRLSM*FRPRTS
Trigger: GCTGGTCCTAGGCCGGAAGCACATGCTAAGACGGAG...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp CCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGACAGCTGGCTTGCTTTTaGACCTCTTCCATCTCATCC +
Preference number: 4 (lower is better)
Translates to: PKALLVTQAKWNSWPSRRQLACF*TSSISS
Trigger: GGATGAGATGGAAGAGGTGCAAAAGCAAGCCAGCTG...TCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR GCA 90 bp TTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGCAGCTGGCTTGCTTTTaGACCTCTTCCATCTCATCC +
Preference number: 4 (lower is better)
Translates to: LSSGQRQCPKQTPAQEPLQLACF*TSSISS
Trigger: GGATGAGATGGAAGAGGTGCAAAAGCAAGCCAGCTG...CAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp TGCACTCCTCAAGGTCACCGTGGCAGTATGACTTATGCTGAGCAACCCTACAATCAGAGAATGAGACTATaGCAGAAATGGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CTPQGHRGSMTYAEQPYNQRMRL*QKWEEA
Trigger: TGCCTCCTCCCATTTCTGGCATAGTCTCATTCTCTG...ATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAAAAAAGAGGAGTGAATaGCCCCTCTTCTCCAATCCA +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPKKRSE*PLFSNP
Trigger: TGGATTGGAGAAGAGGGGGCATTCACTCCTCTTTTT...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp CCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGATTCAATCTCCCAAATTaGTGGGGATCGACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: PKALLVTQAKWNSWPSRRFNLPN*WGSTEA
Trigger: GGCCTCAGTCGATCCCCAGCAATTTGGGAGATTGAA...TCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAACTCCATCTGTCTGAATaGATCAATCCCCGGATGAGA +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQLHLSE*INPRMR
Trigger: TCTCATCCGGGGATTGATCCATTCAGACAGATGGAG...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR CCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTGGCATACAGAAGGAATaGATCATCCTCCGAGATGTC +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTGIQKE*IILRDV
Trigger: GACATCTCGGAGGATGATCCATTCCTTCTGTATGCC...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp CCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGATCCCGGAGTGCAGTGTaGCATACAGAAGGAATGGAT +
Preference number: 4 (lower is better)
Translates to: PKALLVTQAKWNSWPSRRSRSAV*HTEGMD
Trigger: ATCCATTCCTTCTGTATGCCACACTGCACTCCGGGA...TCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGGCAGACAGGCCTTGTaGTCCCGCATCAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQGRQAL*SRIRSL
Trigger: AAGAGACCTGATGCGGGACCACAAGGCCTGTCTGCC...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTCAAGTCTTCATCATATaGTATGTGCCACGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFQVFII*YVPRVS
Trigger: GGAGACTCGTGGCACATACCATATGATGAAGACTTG...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTGGAGGCAAAGCCATTTaGTTGGTACTTCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTGGKAI*LVLHRN
Trigger: GTTCCTGTGAAGTACCAACCAAATGGCTTTGCCTCC...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGGCTAAGTGGAATAGCTaGCCCAGTAGGAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMAKWNS*PSRRNA
Trigger: TGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGC...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTGTCACCCAAGCTAAGTaGAATAGCTGGCCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: WIPKALLVTQAKWNSWPSVTQAK*NSWPSR
Trigger: CCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGAC...ACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTACTGAGGCCAGGGGTTaGAGACTAGTCTTGTCAACA +
Preference number: 4 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSTEARG*RLVLST
Trigger: TGTTGACAAGACTAGTCTCCAACCCCTGGCCTCAGT...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TGCACTCCTCAAGGTCACCGTGGCAGTATGACTTATGCTGAGCAACCCTACAATAATTCCTCCTTCTTGTaGTGTCCAGGAGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: CTPQGHRGSMTYAEQPYNNSSFL*CPGACL
Trigger: CAAGCAAGCTCCTGGACACCACAAGAAGGAGGAATT...ATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCAGTCACTGGCCAGGACTaGGCAGGTAAAAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPVTGQD*AGKSWS
Trigger: GGACCAGCTTTTACCTGCCCAGTCCTGGCCAGTGAC...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR CAA 72 bp TCCTTTGTTTATTTAGCACAGACTCAAGCAGACTGCTaGTCACTGGCCAGGACTGGGCAGGTAAAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SFVYLAQTQADC*SLARTGQVKAG
Trigger: ACCAGCTTTTACCTGCCCAGTCCTGGCCAGTGACAAGCAGTCTGCTTGAGTCTGTGCTAAATAAACAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCACCGAACGCTGACAAATaGAGTTCACTTCATTCAACA +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPPNADK*SSLHST
Trigger: TGTTGAATGAAGTGAACTTCATTTGTCAGCGTTCGG...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR TCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTCAGCCATCTGTGAAATaGTCCAACTTTCGAAACTGG +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTQPSVK*SNFRNW
Trigger: CCAGTTTCGAAAGTTGGATCATTTCACAGATGGCTG...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR TCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACATCTATAGAGCTATaGCAGCCAGCCATCTGTGAA +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQTSIEL*QPAICE
Trigger: TTCACAGATGGCTGGCTGTCATAGCTCTATAGATGT...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR TCA 90 bp TTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGTATACTGTGTGCAAATaGCTCCCCTGGATACAGCTG +
Preference number: 4 (lower is better)
Translates to: LSSGQRQCPKQTPAQEPLYTVCK*LPWIQL
Trigger: CAGCTGTATCCAGGGGAGTCATTTGCACACAGTATA...CAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR TCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAATTCCGTTTGGCTAGTTaGGAGACGACATTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQFRLAS*ETTFKR
Trigger: TCTCTTGAATGTCGTCTCTCAACTAGCCAAACGGAA...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGTTCCGTTTGGCTAGTTaGGAGACGACATTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMFRLAS*ETTFKR
Trigger: TCTCTTGAATGTCGTCTCTCAACTAGCCAAACGGAA...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGGTGATAAACCTGCAGTaGTTCCCGGAGTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKVINLQ*FPECSV
Trigger: CACACTGCACTCCGGGAATCACTGCAGGTTTATCAC...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAACCACTGTGTCATAGCTaGGAATACGCTGAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQPLCHS*EYAERL
Trigger: TAACCTTTCAGCGTATTCTCAGCTATGACACAGTGG...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTATGGGAGGAGGCATTTaGAACAACATGAGTATCTCA +
Preference number: 4 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFMGGGI*NNMSIS
Trigger: TGAGATACTCATGTTGTTTCAAATGCCTCCTCCCAT...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTATTAGCCAAGCCTGGTaGTACATGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: WIPKALLVTQAKWNSWPSISQAW*YMPVVP
Trigger: TGGGACTACAGGCATGTATCACCAGGCTTGGCTAAT...ACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCGGCTCATTGCAGCCTTaGCCTCTGAGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: IESFYLQDRGNALNKHQLGSLQP*PLRLKQ
Trigger: TTGCTTGAGCCTCAGAGGTCAAGGCTGCAATGAGCC...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp ATCAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGAATGTTCTATACTGCTaGGCCATTCAGGATACTTGG +
Preference number: 4 (lower is better)
Translates to: IRTQMGSLSVWYQLLPSGNVLYC*AIQDTW
Trigger: CCAAGTATCCTGAATGGCTCAGCAGTATAGAACATT...CCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCGACCCAACAGAGCCCTaGGAGAATAAACTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSDPTEP*ENKLSL
Trigger: AAGGCTGAGTTTATTCTCTCAGGGCTCTGTTGGGTC...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCGCACTCCAGCCTAGATaGAAAAAGATCAAGACTCTG +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLALQPR*KKIKTL
Trigger: CAGAGTCTTGATCTTTTTTCATCTAGGCTGGAGTGC...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTAGGCAGAGGTTGCAGTaGACTGAGATCAAACCATTG +
Preference number: 4 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSRQRLQ*TEIKPL
Trigger: CAATGGTTTGATCTCAGTTCACTGCAACCTCTGCCT...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAATTGGGGGTCGGCGGTaGAGAGTCGAAGTGGAACTT +
Preference number: 4 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQIGGRR*RVEVEL
Trigger: AAGTTCCACTTCGACTCTGCACCGCCGACCCCCAAT...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTAGTGTTCCTCACAGGTaGCAAGGCATGATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSSVPHR*QGMIFS
Trigger: ACTGAAGATCATGCCTTGGCACCTGTGAGGAACACT...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCTTTGGCTGCTACCCATaGCAGCAGAGATTTAGCCAC +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSFGCYP*QQRFSH
Trigger: GTGGCTAAATCTCTGCTGGCATGGGTAGCAGCCAAA...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR GCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTACCATTATTTTTGGCTaGTACCCATGCCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTTIIFG*YPCQQR
Trigger: TCTCTGCTGGCATGGGTAGCAGCCAAAAATAATGGT...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR GCA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCCAGCTGGCTTGCTTTTaGACCTCTTCCATCTCATCC +
Preference number: 4 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLQLACF*TSSISS
Trigger: GGATGAGATGGAAGAGGTGCAAAAGCAAGCCAGCTG...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCATCATCATATGGTATGTaGCACGAGTCTCCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPSSYGM*HESPVV
Trigger: AACAACTGGAGACTCGTGGCACATACCATATGATGA...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTTTCAATCTCCCAAATTaGTGGGGATCGACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: WIPKALLVTQAKWNSWPSFNLPN*WGSTEA
Trigger: GGCCTCAGTCGATCCCCAGCAATTTGGGAGATTGAA...ACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp ATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACAGCTGGGACTATGTGTaGAAACTACCATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: IAGPVGEMQVLLYTKFSNSWDYV*KLPCLA
Trigger: AGCCAGGCATGGTAGTTTGCACACATAGTCCCAGCT...GTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGCTGGGACTATGTGTaGAAACTACCATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: WIPKALLVTQAKWNSWPSSWDYV*KLPCLA
Trigger: AGCCAGGCATGGTAGTTTGCACACATAGTCCCAGCT...ACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGGTGTCTGGTACCAGCTaGTTCCTTCAGGGAATCCCT +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKVSGTS*FLQGIP
Trigger: AGGGATTCCCTGAAGGAAGCAGCTGGTACCAGACAC...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCCAGGAGGCAGAGGTTaGAGTGAACTGAGATCAAAC +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSPGGRG*SELRSN
Trigger: GTTTGATCTCAGTTCACTGCAACCTCTGCCTCCTGG...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCCCAGGAGGCAGAGGTTaGAGTGAACTGAGATCAAAC +
Preference number: 4 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLPGGRG*SELRSN
Trigger: GTTTGATCTCAGTTCACTGCAACCTCTGCCTCCTGG...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCAGACTCAAGCAGACTaGTTGTCACTGGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQEQTQAD*LSLART
Trigger: AGTCCTGGCCAGTGACAAGCAGTCTGCTTGAGTCTG...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTAGAGCAGGAATCCTCTaGTGCCTCTTACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSRAGIL*CLLHSS
Trigger: ACTGGAATGTAAGAGGCACCAGAGGATTCCTGCTCT...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTCTCCATCTGTCTGAATaGATCAATCCCCGGATGAGA +
Preference number: 4 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSLHLSE*INPRMR
Trigger: TCTCATCCGGGGATTGATCCATTCAGACAGATGGAG...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAGTTGTCTTTCTGTACTaGTCACCTCCATCTATCACA +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPVVFLY*SPPSIT
Trigger: TGTGATAGATGGAGGTGACCAGTACAGAAAGACAAC...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp CCAGGTCATCTTCCTGGGTCTGTTCCTCATCTCCAAAATGGACTTTACATGCTCGTCGCAGATTCCGTTTaGCTAGTTGAGAGACGACAT +
Preference number: 4 (lower is better)
Translates to: PGHLPGSVPHLQNGLYMLVADSV*LVERRH
Trigger: ATGTCGTCTCTCAACTAGCCAAACGGAATCTGCGAC...GAGCATGTAAAGTCCATTTTGGAGATGAGGAACAGACCCAGGAAGATGACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp CCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAGGCATACAGAAGGAATaGATCATCCTCCGAGATGTC +
Preference number: 4 (lower is better)
Translates to: PKALLVTQAKWNSWPSRRGIQKE*IILRDV
Trigger: GACATCTCGGAGGATGATCCATTCCTTCTGTATGCC...TCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp TTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGGGAGGCAAAGCCATTTaGTTGGTACTTCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: LSSGQRQCPKQTPAQEPLGGKAI*LVLHRN
Trigger: GTTCCTGTGAAGTACCAACCAAATGGCTTTGCCTCC...CAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCACTCTATGTCTTTTGGTaGAGGCAAAGCCATTTGGTT +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPLYVFW*RQSHLV
Trigger: AACCAAATGGCTTTGCCTCCACCAAAAGACATAGAG...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp CAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGAACTCTATGTCTTTTGGTaGAGGCAAAGCCATTTGGTT +
Preference number: 4 (lower is better)
Translates to: QNTNGQPKCLVPAASFRELYVFW*RQSHLV
Trigger: AACCAAATGGCTTTGCCTCCACCAAAAGACATAGAG...TTCCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTATCTCAGGGACAGATaGATTGATTCTGCTATTGGT +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTYLRDR*IDSAIG
Trigger: ACCAATAGCAGAATCAATCCATCTGTCCCTGAGATA...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp CCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAGCCCCCAAAGTAGCTaGGACTATGTGTGCAAACTA +
Preference number: 4 (lower is better)
Translates to: PKALLVTQAKWNSWPSRRSPQSS*DYVCKL
Trigger: TAGTTTGCACACATAGTCCCAGCTACTTTGGGGGCT...TCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTCCTCATCTCCAAAATaGACTTTACATGCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTSSSPK*TLHALR
Trigger: CCTTAGAGCATGTAAAGTCCATTTTGGAGATGAGGA...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGAGCAATTCTCCCATTTaGCCTCCCAAAGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LSSGQRQCPKQTPAQEPLSNSPI*PPKVLE
Trigger: TTCCAGCACTTTGGGAGGCCAAATGGGAGAATTGCT...CAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCCTGGTCTCCAACTCCTaGCTTCAAGCAATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLLVSNS*LQAILP
Trigger: TGGGAGAATTGCTTGAAGCCAGGAGTTGGAGACCAG...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCGCCATTCAGGATACTTaGGCCCTTAAAAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLAIQDT*ALKRGT
Trigger: TGTACCTCTTTTAAGGGCCCAAGTATCCTGAATGGC...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCGTTTTCCAGGAACAGTaGATCACAGCTGTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLVFQEQ*ITAVLK
Trigger: TTTCAGGACAGCTGTGATCCACTGTTCCTGGAAAAC...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605870.5
CDS-3UTR TCA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGAACCTCTGCTGGTTCCTaGTGCCACAGCGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRTSAGS*CHSGLP
Trigger: TGGCAGACCGCTGTGGCATCAGGAACCAGCAGAGGT...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTCAGATGTCTGCATATaGAAGACACAGAGATACAAA +
Preference number: 4 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTSDVCI*KTQRYK
Trigger: TTTGTATCTCTGTGTCTTTCATATGCAGACATCTGA...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR TCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCTATACTGTGTGCAAATaGCTCCCCTGGATACAGCTG +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSYTVCK*LPWIQL
Trigger: CAGCTGTATCCAGGGGAGTCATTTGCACACAGTATA...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR TCA 90 bp TTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGTTCCGTTTGGCTAGTTaGGAGACGACATTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: LSSGQRQCPKQTPAQEPLFRLAS*ETTFKR
Trigger: TCTCTTGAATGTCGTCTCTCAACTAGCCAAACGGAA...CAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGTGATAAACCTGCAGTaGTTCCCGGAGTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQVINLQ*FPECSV
Trigger: CACACTGCACTCCGGGAATCACTGCAGGTTTATCAC...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp CCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGACCACTGTGTCATAGCTaGGAATACGCTGAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: PKALLVTQAKWNSWPSRRPLCHS*EYAERL
Trigger: TAACCTTTCAGCGTATTCTCAGCTATGACACAGTGG...TCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR TCA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTATAACATACAGAGAATaGGACTATGCCAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFITYRE*DYARNG
Trigger: CCCATTTCTGGCATAGTCTCATTCTCTGTATGTTAT...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGTTTGAGGCTGCAGTaGACTGTGATCACGTCACTG +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKSLRLQ*TVITSL
Trigger: CAGTGACGTGATCACAGTTCACTGCAGCCTCAAACT...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp CCAGGTCATCTTCCTGGGTCTGTTCCTCATCTCCAAAATGGACTTTACATGCTCGTCTTGTCAACAGAGTaGGACAGCCATCTCTACAAA +
Preference number: 4 (lower is better)
Translates to: PGHLPGSVPHLQNGLYMLVLSTE*DSHLYK
Trigger: TTTGTAGAGATGGCTGTCTCACTCTGTTGACAAGAC...GAGCATGTAAAGTCCATTTTGGAGATGAGGAACAGACCCAGGAAGATGACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TGCACTCCTCAAGGTCACCGTGGCAGTATGACTTATGCTGAGCAACCCTACAATAATGTTCTATACTGCTaGGCCATTCAGGATACTTGG +
Preference number: 4 (lower is better)
Translates to: CTPQGHRGSMTYAEQPYNNVLYC*AIQDTW
Trigger: CCAAGTATCCTGAATGGCTCAGCAGTATAGAACATT...ATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCAGTCACCGTGGCAGTATaGCTTATGCTGAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPVTVAV*LMLSNP
Trigger: AGGGTTGCTCAGCATAAGTCATACTGCCACGGTGAC...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAATAAGCCACCTCAGATaGGGTAGACCCAACAGAGCC +
Preference number: 4 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQISHLR*GRPNRA
Trigger: GGCTCTGTTGGGTCTACCTCATCTGAGGTGGCTTAT...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGACCGGGGCAACATGGTaGAAACCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQETGATW*KPVSTK
Trigger: TTTAGTAGAGACGGGTTTTCACCATGTTGCCCCGGT...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTCTGCGTACCGAACGCTaGCAAATGAAGTTCACTTCA +
Preference number: 4 (lower is better)
Translates to: WIPKALLVTQAKWNSWPSLRTER*QMKFTS
Trigger: TGAAGTGAACTTCATTTGTCAGCGTTCGGTACGCAG...ACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321130.14
CDS-3UTR GCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTGGCAATCAGATTCGTTaGTTTGGTATTCTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTGNQIR*FGILWR
Trigger: TCTCCACAGAATACCAAAGCAACGAATCTGATTGCC...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR GCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAGGCAATCAGATTCGTTaGTTTGGTATTCTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQGNQIR*FGILWR
Trigger: TCTCCACAGAATACCAAAGCAACGAATCTGATTGCC...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR GCA 90 bp ATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACAGTGTTCCTCACAGGTaGCAAGGCATGATCTTCAGT +
Preference number: 4 (lower is better)
Translates to: IAGPVGEMQVLLYTKFSNSVPHR*QGMIFS
Trigger: ACTGAAGATCATGCCTTGGCACCTGTGAGGAACACT...GTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACTCCGTCTTAGCATGTaGTTCCGGCCTAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTLRLSM*FRPRTS
Trigger: GCTGGTCCTAGGCCGGAAGCACATGCTAAGACGGAG...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCAAACCTATTTACAATTaGCAGCTGATGTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLKPIYN*QLMSLL
Trigger: CAGCAGGGACATCAGCTGGCAATTGTAAATAGGTTT...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR GCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGAAACCTATTTACAATTaGCAGCTGATGTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMKPIYN*QLMSLL
Trigger: CAGCAGGGACATCAGCTGGCAATTGTAAATAGGTTT...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTTCATCATATGGTATGTaGCACGAGTCTCCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTSSYGM*HESPVV
Trigger: AACAACTGGAGACTCGTGGCACATACCATATGATGA...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGTCATCATATGGTATGTaGCACGAGTCTCCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMSSYGM*HESPVV
Trigger: AACAACTGGAGACTCGTGGCACATACCATATGATGA...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCCAGAGAATGAGACTATaGCAGAAATGGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLQRMRL*QKWEEA
Trigger: TGCCTCCTCCCATTTCTGGCATAGTCTCATTCTCTG...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR GCA 90 bp TTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGAAAAAGAGGAGTGAATaGCCCCTCTTCTCCAATCCA +
Preference number: 4 (lower is better)
Translates to: LSSGQRQCPKQTPAQEPLKKRSE*PLFSNP
Trigger: TGGATTGGAGAAGAGGGGGCATTCACTCCTCTTTTT...CAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCATTTGGCCTCCCAAAGTaGTGGAACTGTAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPFGLPK*WNCRCG
Trigger: CCCACACCTACAGTTCCAGCACTTTGGGAGGCCAAA...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCGTGTCTGGTACCAGCTaGTTCCTTCAGGGAATCCCT +
Preference number: 4 (lower is better)
Translates to: IESFYLQDRGNALNKHQLVSGTS*FLQGIP
Trigger: AGGGATTCCCTGAAGGAAGCAGCTGGTACCAGACAC...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCAGAGCAGGAATCCTCTaGTGCCTCTTACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLRAGIL*CLLHSS
Trigger: ACTGGAATGTAAGAGGCACCAGAGGATTCCTGCTCT...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCATCAGATTCGTTGCTTTaGTATTCTGTGGAGACATTG +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPSDSLL*YSVETL
Trigger: CAATGTCTCCACAGAATACCAAAGCAACGAATCTGA...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR CCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCATCCAACTTTCGAAACTaGTCTTTCCGGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPSNFRN*SFRCFL
Trigger: AAGAAAACACCGGAAAGACCAGTTTCGAAAGTTGGA...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR CCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTGTTGTCTTTCTGTACTaGTCACCTCCATCTATCACA +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTVVFLY*SPPSIT
Trigger: TGTGATAGATGGAGGTGACCAGTACAGAAAGACAAC...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp ATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACGTCGCAGATTCCGTTTaGCTAGTTGAGAGACGACAT +
Preference number: 4 (lower is better)
Translates to: IAGPVGEMQVLLYTKFSNVADSV*LVERRH
Trigger: ATGTCGTCTCTCAACTAGCCAAACGGAATCTGCGAC...GTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTGGCATACAGAAGGAATaGATCATCCTCCGAGATGTC +
Preference number: 4 (lower is better)
Translates to: WIPKALLVTQAKWNSWPSGIQKE*IILRDV
Trigger: GACATCTCGGAGGATGATCCATTCCTTCTGTATGCC...ACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACAGGCAGACAGGCCTTGTaGTCCCGCATCAGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTGRQAL*SRIRSL
Trigger: AAGAGACCTGATGCGGGACCACAAGGCCTGTCTGCC...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCGGAGGCAAAGCCATTTaGTTGGTACTTCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSGGKAI*LVLHRN
Trigger: GTTCCTGTGAAGTACCAACCAAATGGCTTTGCCTCC...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp ATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACGGAGGCAAAGCCATTTaGTTGGTACTTCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: IAGPVGEMQVLLYTKFSNGGKAI*LVLHRN
Trigger: GTTCCTGTGAAGTACCAACCAAATGGCTTTGCCTCC...GTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCTCTATGTCTTTTGGTaGAGGCAAAGCCATTTGGTT +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMLYVFW*RQSHLV
Trigger: AACCAAATGGCTTTGCCTCCACCAAAAGACATAGAG...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp TGCACTCCTCAAGGTCACCGTGGCAGTATGACTTATGCTGAGCAACCCTACAATAGACTATGCCAGAAATaGGAGGAGGCATTTGAAACA +
Preference number: 4 (lower is better)
Translates to: CTPQGHRGSMTYAEQPYNRLCQK*EEAFET
Trigger: TGTTTCAAATGCCTCCTCCCATTTCTGGCATAGTCT...ATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCAGACTATGCCAGAAATaGGAGGAGGCATTTGAAACA +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLRLCQK*EEAFET
Trigger: TGTTTCAAATGCCTCCTCCCATTTCTGGCATAGTCT...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp AACATACAGAGAATGAGACTATGCCAGAAATGGGAGGAGGCATTTGAAACAACACCACAGCCCGAACACTaGCCACTTTTTCGGACTGTG +
Preference number: 4 (lower is better)
Translates to: NIQRMRLCQKWEEAFETTPQPEH*PLFRTV
Trigger: CACAGTCCGAAAAAGTGGCCAGTGTTCGGGCTGTGG...TGTTGTTTCAAATGCCTCCTCCCATTTCTGGCATAGTCTCATTCTCTGTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534898.9
ENST00000605870.5
CDS-3UTR TCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCACAGCCAGCCATCTGTaGAATGATCCAACTTTCGAA +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSTASHL*NDPTFE
Trigger: TTCGAAAGTTGGATCATTTCACAGATGGCTGGCTGT...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR TCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTTCTTCTGGACTCAGCTaGATAGACTCTATGGTTTTT +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTSSGLS*IDSMVF
Trigger: AAAAACCATAGAGTCTATTCAGCTGAGTCCAGAAGA...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAATCTTCTGGACTCAGCTaGATAGACTCTATGGTTTTT +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQSSGLS*IDSMVF
Trigger: AAAAACCATAGAGTCTATTCAGCTGAGTCCAGAAGA...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACATTCAAGAGAAGTTaGGATTCACGAACTTTAGGA +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPTFKRS*DSRTLG
Trigger: TCCTAAAGTTCGTGAATCTCAACTTCTCTTGAATGT...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCTTCCGTTTGGCTAGTTaGGAGACGACATTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSFRLAS*ETTFKR
Trigger: TCTCTTGAATGTCGTCTCTCAACTAGCCAAACGGAA...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACAGCTCAAGAGCCTCTaGTGCCAACCTAGAGGGTAC +
Preference number: 4 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTQLKSL*CQPRGY
Trigger: GTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTG...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCACAGAGGACGATAAATaGTTCCATGTGGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSTEDDK*FHVDRA
Trigger: TGCCCTATCCACATGGAATCATTTATCGTCCTCTGT...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR TCA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACAGGCTCATTGCAGCCTTaGCCTCTGAGGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTGSLQP*PLRLKQ
Trigger: TTGCTTGAGCCTCAGAGGTCAAGGCTGCAATGAGCC...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCAGAAGTTTAGCTCACTaGAAGCACAGTTTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLRSLAH*KHSFLS
Trigger: ACTTAGGAAACTGTGCTTTCAGTGAGCTAAACTTCT...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTTTTTCGGACTGTGGTaGATTGTCCTTTCCATTGTT +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLFFGLW*IVLSIV
Trigger: AACAATGGAAAGGACAATTCACCACAGTCCGAAAAA...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534898.9
ENST00000605870.5
CDS-3UTR GCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGGCAGGAATCCTCTGGTaGCTCTTACATTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKAGILW*LLHSSS
Trigger: TGAACTGGAATGTAAGAGGCACCAGAGGATTCCTGC...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp CAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGAAGACAAATCAAGGTTCTaGTTTTGGGGCTACTTAAAA +
Preference number: 4 (lower is better)
Translates to: QNTNGQPKCLVPAASFREDKSRF*FWGYLK
Trigger: TTTTAAGTAGCCCCAAAAGCAGAACCTTGATTTGTC...TTCCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCACCATTATTTTTGGCTaGTACCCATGCCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSTIIFG*YPCQQR
Trigger: TCTCTGCTGGCATGGGTAGCAGCCAAAAATAATGGT...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR GCA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCCAGCTGGCTTGCTTTTaGACCTCTTCCATCTCATCC +
Preference number: 4 (lower is better)
Translates to: IESFYLQDRGNALNKHQLQLACF*TSSISS
Trigger: GGATGAGATGGAAGAGGTGCAAAAGCAAGCCAGCTG...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp TTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGAAACCTATTTACAATTaGCAGCTGATGTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSSGQRQCPKQTPAQEPLKPIYN*QLMSLL
Trigger: CAGCAGGGACATCAGCTGGCAATTGTAAATAGGTTT...CAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTAAACCTATTTACAATTaGCAGCTGATGTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSKPIYN*QLMSLL
Trigger: CAGCAGGGACATCAGCTGGCAATTGTAAATAGGTTT...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR GCA 90 bp TTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGTCATCATATGGTATGTaGCACGAGTCTCCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LSSGQRQCPKQTPAQEPLSSYGM*HESPVV
Trigger: AACAACTGGAGACTCGTGGCACATACCATATGATGA...CAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAAAAATGGACTTTACATaGTCTAAGGTTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPKMDFT*SKVTPA
Trigger: AGCAGGAGTAACCTTAGAGCATGTAAAGTCCATTTT...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp CCAGGTCATCTTCCTGGGTCTGTTCCTCATCTCCAAAATGGACTTTACATGCTCTGGACAAGGGACAGATaGACTTCAGTTTATCTCAAG +
Preference number: 4 (lower is better)
Translates to: PGHLPGSVPHLQNGLYMLWTRDR*TSVYLK
Trigger: CTTGAGATAAACTGAAGTGCATCTGTCCCTTGTCCA...GAGCATGTAAAGTCCATTTTGGAGATGAGGAACAGACCCAGGAAGATGACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAATCAGATTCGTTGCTTTaGTATTCTGTGGAGACATTG +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQSDSLL*YSVETL
Trigger: CAATGTCTCCACAGAATACCAAAGCAACGAATCTGA...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR CCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAATCCAACTTTCGAAACTaGTCTTTCCGGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQSNFRN*SFRCFL
Trigger: AAGAAAACACCGGAAAGACCAGTTTCGAAAGTTGGA...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR CCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGTCCAACTTTCGAAACTaGTCTTTCCGGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMSNFRN*SFRCFL
Trigger: AAGAAAACACCGGAAAGACCAGTTTCGAAAGTTGGA...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR CCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGCTCCATCTGTCTGAATaGATCAATCCCCGGATGAGA +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKLHLSE*INPRMR
Trigger: TCTCATCCGGGGATTGATCCATTCAGACAGATGGAG...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR CCA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCATCCCGGAGTGCAGTGTaGCATACAGAAGGAATGGAT +
Preference number: 4 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPSRSAV*HTEGMD
Trigger: ATCCATTCCTTCTGTATGCCACACTGCACTCCGGGA...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCCAAGTCTTCATCATATaGTATGTGCCACGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLQVFII*YVPRVS
Trigger: GGAGACTCGTGGCACATACCATATGATGAAGACTTG...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTCTCTATGTCTTTTGGTaGAGGCAAAGCCATTTGGTT +
Preference number: 4 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSLYVFW*RQSHLV
Trigger: AACCAAATGGCTTTGCCTCCACCAAAAGACATAGAG...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGGCTAAGTGGAATAGCTaGCCCAGTAGGAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKAKWNS*PSRRNA
Trigger: TGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGC...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGGCTAAGTGGAATAGCTaGCCCAGTAGGAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQEAKWNS*PSRRNA
Trigger: TGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGC...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTTATCTCAGGGACAGATaGATTGATTCTGCTATTGGT +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTYLRDR*IDSAIG
Trigger: ACCAATAGCAGAATCAATCCATCTGTCCCTGAGATA...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGAGCCCCCAAAGTAGCTaGGACTATGTGTGCAAACTA +
Preference number: 4 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQESPQSS*DYVCKL
Trigger: TAGTTTGCACACATAGTCCCAGCTACTTTGGGGGCT...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTAGAGCTCTTTTGTCTTaGTGTGCAGTAATGTTGCAT +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTRALLS*CAVMLH
Trigger: ATGCAACATTACTGCACACCAAGACAAAAGAGCTCT...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCACTGGTCTCCAACTCCTaGCTTCAAGCAATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPLVSNS*LQAILP
Trigger: TGGGAGAATTGCTTGAAGCCAGGAGTTGGAGACCAG...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGACCACAGCCCGAACACTaGCCAGTGGATCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRPQPEH*PVDHSC
Trigger: ACAGCTGTGATCCACTGGCCAGTGTTCGGGCTGTGG...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000321130.14
CDS-3UTR TCA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGGTTGTGTTGGGAGTTaGATAGTGTTCCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQGCVGS*IVFLTG
Trigger: ACCTGTGAGGAACACTATTCAACTCCCAACACAACC...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR TCA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCAGCCATCTGTGAAATaGTCCAACTTTCGAAACTGG +
Preference number: 4 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQEQPSVK*SNFRNW
Trigger: CCAGTTTCGAAAGTTGGATCATTTCACAGATGGCTG...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR TCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGACATCTATAGAGCTATaGCAGCCAGCCATCTGTGAA +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKTSIEL*QPAICE
Trigger: TTCACAGATGGCTGGCTGTCATAGCTCTATAGATGT...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR TCA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAATTCTCTCCATCTGTCTaGATGGATCAATCCCCGGAT +
Preference number: 4 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQFSPSV*MDQSPD
Trigger: ATCCGGGGATTGATCCATTCAGACAGATGGAGAGAA...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR TCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTCCCCTGGATACAGCTaGTTATTTCTTAGATATGAA +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLSPGYS*LFLRYE
Trigger: TTCATATCTAAGAAATAATCAGCTGTATCCAGGGGA...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAATCCCCTGGATACAGCTaGTTATTTCTTAGATATGAA +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQSPGYS*LFLRYE
Trigger: TTCATATCTAAGAAATAATCAGCTGTATCCAGGGGA...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR TCA 90 bp TTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGTCTTCTGGACTCAGCTaGATAGACTCTATGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LSSGQRQCPKQTPAQEPLSSGLS*IDSMVF
Trigger: AAAAACCATAGAGTCTATTCAGCTGAGTCCAGAAGA...CAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCTTTACAATTGCCAGCTaGTGTCCCTGCTGCCACTTA +
Preference number: 4 (lower is better)
Translates to: IESFYLQDRGNALNKHQLFTIAS*CPCCHL
Trigger: TAAGTGGCAGCAGGGACATCAGCTGGCAATTGTAAA...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGCCACTGTGTCATAGCTaGGAATACGCTGAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKPLCHS*EYAERL
Trigger: TAACCTTTCAGCGTATTCTCAGCTATGACACAGTGG...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp AACATACAGAGAATGAGACTATGCCAGAAATGGGAGGAGGCATTTGAAACAACAAGTTTGAGGCTGCAGTaGACTGTGATCACGTCACTG +
Preference number: 4 (lower is better)
Translates to: NIQRMRLCQKWEEAFETTSLRLQ*TVITSL
Trigger: CAGTGACGTGATCACAGTTCACTGCAGCCTCAAACT...TGTTGTTTCAAATGCCTCCTCCCATTTCTGGCATAGTCTCATTCTCTGTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp CCAGGTCATCTTCCTGGGTCTGTTCCTCATCTCCAAAATGGACTTTACATGCTCAAGAAAGAACTATCATaGAGGGGTGCAGACATGAAT +
Preference number: 4 (lower is better)
Translates to: PGHLPGSVPHLQNGLYMLKKELS*RGADMN
Trigger: ATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTT...GAGCATGTAAAGTCCATTTTGGAGATGAGGAACAGACCCAGGAAGATGACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACATTACCTCCCTCCCTTTaGGACAGGGTCTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTLPPSL*DRVSLC
Trigger: ACAGAGTGAGACCCTGTCTCAAAGGGAGGGAGGTAA...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAGGCAGAGGTTGCAGTaGACTGAGATCAAACCATTG +
Preference number: 4 (lower is better)
Translates to: IESFYLQDRGNALNKHQLRQRLQ*TEIKPL
Trigger: CAATGGTTTGATCTCAGTTCACTGCAACCTCTGCCT...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCTGCTCCAGCGAACGCTaGCAAATGAAGTTCACTTCA +
Preference number: 4 (lower is better)
Translates to: IESFYLQDRGNALNKHQLCSSER*QMKFTS
Trigger: TGAAGTGAACTTCATTTGTCAGCGTTCGCTGGAGCA...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604948.5
CDS-3UTR GCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGAATAGAAAGTCATTATaGAGTGAGATCAGCACCAGA +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMNRKSL*SEISTR
Trigger: TCTGGTGCTGATCTCACTGCATAATGACTTTCTATT...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR GCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGACCATTATTTTTGGCTaGTACCCATGCCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKTIIFG*YPCQQR
Trigger: TCTCTGCTGGCATGGGTAGCAGCCAAAAATAATGGT...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR GCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTAAAATGGACTTTACATaGTCTAAGGTTACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTKMDFT*SKVTPA
Trigger: AGCAGGAGTAACCTTAGAGCATGTAAAGTCCATTTT...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCTGGACAAGGGACAGATaGACTTCAGTTTATCTCAAG +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSWTRDR*TSVYLK
Trigger: CTTGAGATAAACTGAAGTGCATCTGTCCCTTGTCCA...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGCCTCATTTCAGGCTGTaGGGGGTGACTCACACCTGT +
Preference number: 4 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQPHFRL*GVTHTC
Trigger: ACAGGTGTGAGTCACCCCGCACAGCCTGAAATGAGG...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGACCTCATTTCAGGCTGTaGGGGGTGACTCACACCTGT +
Preference number: 4 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRPHFRL*GVTHTC
Trigger: ACAGGTGTGAGTCACCCCGCACAGCCTGAAATGAGG...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCTGCTCACTCCTAAGTaGCTTTTACAAATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMLLTPK*LLQISF
Trigger: AAAGGAAATTTGTAAAAGGCACTTAGGAGTGAGCAG...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACAGACTCAAGCAGACTaGTTGTCACTGGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTQTQAD*LSLART
Trigger: AGTCCTGGCCAGTGACAAGCAGTCTGCTTGAGTCTG...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCACATTCATATTCTTCTaGACTCAGCTGAATAGACTC +
Preference number: 4 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLTFIFF*TQLNRL
Trigger: GAGTCTATTCAGCTGAGTCCAGAAGAATATGAATGT...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGACATTCATATTCTTCTaGACTCAGCTGAATAGACTC +
Preference number: 4 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMTFIFF*TQLNRL
Trigger: GAGTCTATTCAGCTGAGTCCAGAAGAATATGAATGT...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTACATTCATATTCTTCTaGACTCAGCTGAATAGACTC +
Preference number: 4 (lower is better)
Translates to: NTSSRASDANLEGTQTQTTFIFF*TQLNRL
Trigger: GAGTCTATTCAGCTGAGTCCAGAAGAATATGAATGT...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp ATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACGTTGTCTTTCTGTACTaGTCACCTCCATCTATCACA +
Preference number: 4 (lower is better)
Translates to: IAGPVGEMQVLLYTKFSNVVFLY*SPPSIT
Trigger: TGTGATAGATGGAGGTGACCAGTACAGAAAGACAAC...GTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGTCGCAGATTCCGTTTaGCTAGTTGAGAGACGACAT +
Preference number: 4 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQVADSV*LVERRH
Trigger: ATGTCGTCTCTCAACTAGCCAAACGGAATCTGCGAC...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCGTCGCAGATTCCGTTTaGCTAGTTGAGAGACGACAT +
Preference number: 4 (lower is better)
Translates to: IESFYLQDRGNALNKHQLVADSV*LVERRH
Trigger: ATGTCGTCTCTCAACTAGCCAAACGGAATCTGCGAC...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCGGCATACAGAAGGAATaGATCATCCTCCGAGATGTC +
Preference number: 4 (lower is better)
Translates to: IESFYLQDRGNALNKHQLGIQKE*IILRDV
Trigger: GACATCTCGGAGGATGATCCATTCCTTCTGTATGCC...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGCAAGTCTTCATCATATaGTATGTGCCACGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKQVFII*YVPRVS
Trigger: GGAGACTCGTGGCACATACCATATGATGAAGACTTG...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCAGGAGGCAAAGCCATTTaGTTGGTACTTCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPGGKAI*LVLHRN
Trigger: GTTCCTGTGAAGTACCAACCAAATGGCTTTGCCTCC...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCCTCTATGTCTTTTGGTaGAGGCAAAGCCATTTGGTT +
Preference number: 4 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLLYVFW*RQSHLV
Trigger: AACCAAATGGCTTTGCCTCCACCAAAAGACATAGAG...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTCTCTATGTCTTTTGGTaGAGGCAAAGCCATTTGGTT +
Preference number: 4 (lower is better)
Translates to: WIPKALLVTQAKWNSWPSLYVFW*RQSHLV
Trigger: AACCAAATGGCTTTGCCTCCACCAAAAGACATAGAG...ACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCGCTAAGTGGAATAGCTaGCCCAGTAGGAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: IESFYLQDRGNALNKHQLAKWNS*PSRRNA
Trigger: TGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGC...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp CCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGATATCTCAGGGACAGATaGATTGATTCTGCTATTGGT +
Preference number: 4 (lower is better)
Translates to: PKALLVTQAKWNSWPSRRYLRDR*IDSAIG
Trigger: ACCAATAGCAGAATCAATCCATCTGTCCCTGAGATA...TCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp TTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGTATCCAATGTTTTCCTaGAGAGCTCTTTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LSSGQRQCPKQTPAQEPLYPMFS*RALLSW
Trigger: CCAAGACAAAAGAGCTCTCCAGGAAAACATTGGATA...CAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTCAGATGTCTGCATATaGAAGACACAGAGATACAAA +
Preference number: 4 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSSDVCI*KTQRYK
Trigger: TTTGTATCTCTGTGTCTTTCATATGCAGACATCTGA...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAATTCCGTTTGGCTAGTTaGGAGACGACATTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQFRLAS*ETTFKR
Trigger: TCTCTTGAATGTCGTCTCTCAACTAGCCAAACGGAA...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCACCACTGTGTCATAGCTaGGAATACGCTGAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPPLCHS*EYAERL
Trigger: TAACCTTTCAGCGTATTCTCAGCTATGACACAGTGG...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR TCA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCCCACTGTGTCATAGCTaGGAATACGCTGAAAGGTTA +
Preference number: 4 (lower is better)
Translates to: IESFYLQDRGNALNKHQLPLCHS*EYAERL
Trigger: TAACCTTTCAGCGTATTCTCAGCTATGACACAGTGG...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGATGGGAGGAGGCATTTaGAACAACATGAGTATCTCA +
Preference number: 4 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQEMGGGI*NNMSIS
Trigger: TGAGATACTCATGTTGTTTCAAATGCCTCCTCCCAT...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR TCA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCATAACATACAGAGAATaGGACTATGCCAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLITYRE*DYARNG
Trigger: CCCATTTCTGGCATAGTCTCATTCTCTGTATGTTAT...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR TCA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCAACAGAGGACGATAAATaGTTCCATGTGGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPTEDDK*FHVDRA
Trigger: TGCCCTATCCACATGGAATCATTTATCGTCCTCTGT...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR TCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCTTTTTCGGACTGTGGTaGATTGTCCTTTCCATTGTT +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSFFGLW*IVLSIV
Trigger: AACAATGGAAAGGACAATTCACCACAGTCCGAAAAA...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGGCGAACGCTGACAAATaGAGTTCACTTCATTCAACA +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKANADK*SSLHST
Trigger: TGTTGAATGAAGTGAACTTCATTTGTCAGCGTTCGC...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604948.5
CDS-3UTR GCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAAACCTATTTACAATTaGCAGCTGATGTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKKPIYN*QLMSLL
Trigger: CAGCAGGGACATCAGCTGGCAATTGTAAATAGGTTT...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp CCAGGTCATCTTCCTGGGTCTGTTCCTCATCTCCAAAATGGACTTTACATGCTCTCTTTTGTCTTGGTGTaGAGTAATGTTGCATTCAGT +
Preference number: 4 (lower is better)
Translates to: PGHLPGSVPHLQNGLYMLSFVLV*SNVAFS
Trigger: ACTGAATGCAACATTACTGCACACCAAGACAAAAGA...GAGCATGTAAAGTCCATTTTGGAGATGAGGAACAGACCCAGGAAGATGACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TGCACTCCTCAAGGTCACCGTGGCAGTATGACTTATGCTGAGCAACCCTACAATTGCTTTGGTATTCTGTaGAGACATTGTTTTAAGAGA +
Preference number: 4 (lower is better)
Translates to: CTPQGHRGSMTYAEQPYNCFGIL*RHCFKR
Trigger: TCTCTTAAAACAATGTCTCCACAGAATACCAAAGCA...ATTGTAGGGTTGCTCAGCATAAGTCATACTGCCACGGTGACCTTGAGGAGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAATGCTTTGGTATTCTGTaGAGACATTGTTTTAAGAGA +
Preference number: 4 (lower is better)
Translates to: TNTSSRASDANLEGTQTQCFGIL*RHCFKR
Trigger: TCTCTTAAAACAATGTCTCCACAGAATACCAAAGCA...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR CCA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGGTTGTCTTTCTGTACTaGTCACCTCCATCTATCACA +
Preference number: 4 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQEVVFLY*SPPSIT
Trigger: TGTGATAGATGGAGGTGACCAGTACAGAAAGACAAC...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGGTTGTCTTTCTGTACTaGTCACCTCCATCTATCACA +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKVVFLY*SPPSIT
Trigger: TGTGATAGATGGAGGTGACCAGTACAGAAAGACAAC...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGTCATCCCGACTCCACTaGGAACTCCGTCTTAGCATG +
Preference number: 4 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQSSRLH*ELRLSM
Trigger: CATGCTAAGACGGAGTTCCCAGTGGAGTCGGGATGA...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR CCA 90 bp AACATACAGAGAATGAGACTATGCCAGAAATGGGAGGAGGCATTTGAAACAACAGGCATACAGAAGGAATaGATCATCCTCCGAGATGTC +
Preference number: 4 (lower is better)
Translates to: NIQRMRLCQKWEEAFETTGIQKE*IILRDV
Trigger: GACATCTCGGAGGATGATCCATTCCTTCTGTATGCC...TGTTGTTTCAAATGCCTCCTCCCATTTCTGGCATAGTCTCATTCTCTGTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACATCCCGGAGTGCAGTGTaGCATACAGAAGGAATGGAT +
Preference number: 4 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTSRSAV*HTEGMD
Trigger: ATCCATTCCTTCTGTATGCCACACTGCACTCCGGGA...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAACAAGTCTTCATCATATaGTATGTGCCACGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQQVFII*YVPRVS
Trigger: GGAGACTCGTGGCACATACCATATGATGAAGACTTG...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCTATCTCAGGGACAGATaGATTGATTCTGCTATTGGT +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSYLRDR*IDSAIG
Trigger: ACCAATAGCAGAATCAATCCATCTGTCCCTGAGATA...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp CCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAAGCCTTTAGTATCTTaGCCAGTTTATTACAGAGGA +
Preference number: 4 (lower is better)
Translates to: PKALLVTQAKWNSWPSRRKPLVS*PVYYRG
Trigger: TCCTCTGTAATAAACTGGCCAAGATACTAAAGGCTT...TCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR CCA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGAACTGCACTCCAGCCCTaGCGACAGAGTAAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRTALQP*RQSKLR
Trigger: TCTCAACTTACTCTGTCGCCAGGGCTGGAGTGCAGT...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGACAGGCTAGAGTGCAGTaGTGCAACGTTGGCTCATTG +
Preference number: 4 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRQARVQ*CNVGSL
Trigger: CAATGAGCCAACGTTGCACCACTGCACTCTAGCCTG...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
3UTR CAA 72 bp CTTCGGCCTCCTCCTCTATCTCTATGTGCTCCTTTTTaGGGAATTTGCATTAGCCTTTTAGATGGGCTTAAT +
Preference number: 4 (lower is better)
Translates to: LRPPPLSLCAPF*GICISLLDGLN
Trigger: ATTAAGCCCATCTAAAAGGCTAATGCAAATTCCCAAAAAAGGAGCACATAGAGATAGAGGAGGAGGCCGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGATGCCCTCATCTTTCCTaGGATATCTGGCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRCPHLS*DIWPWQ
Trigger: TTGCCAAGGCCAGATATCTCAGGAAAGATGAGGGCA...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTCAGATGTCTGCATATaGAAGACACAGAGATACAAA +
Preference number: 4 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLSDVCI*KTQRYK
Trigger: TTTGTATCTCTGTGTCTTTCATATGCAGACATCTGA...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR TCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCTCCCCTGGATACAGCTaGTTATTTCTTAGATATGAA +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSSPGYS*LFLRYE
Trigger: TTCATATCTAAGAAATAATCAGCTGTATCCAGGGGA...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR TCA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCACATTCAAGAGAAGTTaGGATTCACGAACTTTAGGA +
Preference number: 4 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSTFKRS*DSRTLG
Trigger: TCCTAAAGTTCGTGAATCTCAACTTCTCTTGAATGT...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTACATTCAAGAGAAGTTaGGATTCACGAACTTTAGGA +
Preference number: 4 (lower is better)
Translates to: WIPKALLVTQAKWNSWPSTFKRS*DSRTLG
Trigger: TCCTAAAGTTCGTGAATCTCAACTTCTCTTGAATGT...ACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR TCA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCAATGGGAGGAGGCATTTaGAACAACATGAGTATCTCA +
Preference number: 4 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPMGGGI*NNMSIS
Trigger: TGAGATACTCATGTTGTTTCAAATGCCTCCTCCCAT...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR TCA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGATAACATACAGAGAATaGGACTATGCCAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQEITYRE*DYARNG
Trigger: CCCATTTCTGGCATAGTCTCATTCTCTGTATGTTAT...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR TCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGATAACATACAGAGAATaGGACTATGCCAGAAATGGG +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKITYRE*DYARNG
Trigger: CCCATTTCTGGCATAGTCTCATTCTCTGTATGTTAT...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR TCA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGATTAGCCAAGCCTGGTaGTACATGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQISQAW*YMPVVP
Trigger: TGGGACTACAGGCATGTATCACCAGGCTTGGCTAAT...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGGACCCAACAGAGCCCTaGGAGAATAAACTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQDPTEP*ENKLSL
Trigger: AAGGCTGAGTTTATTCTCTCAGGGCTCTGTTGGGTC...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGACCGGGGCAACATGGTaGAAACCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQTGATW*KPVSTK
Trigger: TTTAGTAGAGACGGGTTTTCACCATGTTGCCCCGGT...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGTTTTTCGGACTGTGGTaGATTGTCCTTTCCATTGTT +
Preference number: 4 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQEFFGLW*IVLSIV
Trigger: AACAATGGAAAGGACAATTCACCACAGTCCGAAAAA...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGGCAATCAGATTCGTTaGTTTGGTATTCTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQGNQIR*FGILWR
Trigger: TCTCCACAGAATACCAAAGCAACGAATCTGATTGCC...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACAGAGAATGAGACTATaGCAGAAATGGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTQRMRL*QKWEEA
Trigger: TGCCTCCTCCCATTTCTGGCATAGTCTCATTCTCTG...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR GCA 90 bp CCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAAGTGGCAAAGTCAATaGTCTTTCAAATCCTTCATT +
Preference number: 4 (lower is better)
Translates to: PKALLVTQAKWNSWPSRRKWQSQ*SFKSFI
Trigger: AATGAAGGATTTGAAAGAGCATTGACTTTGCCACTT...TCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp CCAGGTCATCTTCCTGGGTCTGTTCCTCATCTCCAAAATGGACTTTACATGCTCATAAATGATTCCATGTaGATAGGGCATAACATACAG +
Preference number: 4 (lower is better)
Translates to: PGHLPGSVPHLQNGLYMLINDSM*IGHNIQ
Trigger: CTGTATGTTATGCCCTATCCACATGGAATCATTTAT...GAGCATGTAAAGTCCATTTTGGAGATGAGGAACAGACCCAGGAAGATGACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp AACATACAGAGAATGAGACTATGCCAGAAATGGGAGGAGGCATTTGAAACAACAGCCATTCAGGATACTTaGGCCCTTAAAAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: NIQRMRLCQKWEEAFETTAIQDT*ALKRGT
Trigger: TGTACCTCTTTTAAGGGCCCAAGTATCCTGAATGGC...TGTTGTTTCAAATGCCTCCTCCCATTTCTGGCATAGTCTCATTCTCTGTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp AACATACAGAGAATGAGACTATGCCAGAAATGGGAGGAGGCATTTGAAACAACACCGAACGCTGACAAATaGAGTTCACTTCATTCAACA +
Preference number: 4 (lower is better)
Translates to: NIQRMRLCQKWEEAFETTPNADK*SSLHST
Trigger: TGTTGAATGAAGTGAACTTCATTTGTCAGCGTTCGG...TGTTGTTTCAAATGCCTCCTCCCATTTCTGGCATAGTCTCATTCTCTGTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR TCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAAGCAAGAAGGCAGGTaGGTTTTCTCTATTAAACAA +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKKQEGR*VFSIKQ
Trigger: TTGTTTAATAGAGAAAACTCACCTGCCTTCTTGCTT...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGAGGTTGTGTTGGGAGTTaGATAGTGTTCCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRGCVGS*IVFLTG
Trigger: ACCTGTGAGGAACACTATTCAACTCCCAACACAACC...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACAACATCTATAGAGCTATaGCAGCCAGCCATCTGTGAA +
Preference number: 4 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTTSIEL*QPAICE
Trigger: TTCACAGATGGCTGGCTGTCATAGCTCTATAGATGT...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR TCA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGACATTCAAGAGAAGTTaGGATTCACGAACTTTAGGA +
Preference number: 4 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQETFKRS*DSRTLG
Trigger: TCCTAAAGTTCGTGAATCTCAACTTCTCTTGAATGT...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAATAGAAAGTCATTATaGAGTGAGATCAGCACCAGA +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKNRKSL*SEISTR
Trigger: TCTGGTGCTGATCTCACTGCATAATGACTTTCTATT...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp AAAGAAAGAACTATCATGAAGGGGTGCAGACATGAATATTTTCAGCTGAAATCATTTGGCTGCTACCCATaGCAGCAGAGATTTAGCCAC +
Preference number: 4 (lower is better)
Translates to: KERTIMKGCRHEYFQLKSFGCYP*QQRFSH
Trigger: GTGGCTAAATCTCTGCTGGCATGGGTAGCAGCCAAA...TGATTTCAGCTGAAAATATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCAGGTGCAGAGTCGAAGTaGAACTTTTTAAAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPGAESK*NFLKGL
Trigger: CAAACCTTTTAAAAAGTTCCACTTCGACTCTGCACC...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp ATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTGCTTTGGTATTCTGTaGAGACATTGTTTTAAGAGA +
Preference number: 4 (lower is better)
Translates to: IAGPVGEMQVLLYTKFSNCFGIL*RHCFKR
Trigger: TCTCTTAAAACAATGTCTCCACAGAATACCAAAGCA...GTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCATCAGATTCGTTGCTTTaGTATTCTGTGGAGACATTG +
Preference number: 4 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPSDSLL*YSVETL
Trigger: CAATGTCTCCACAGAATACCAAAGCAACGAATCTGA...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCTCCTCATCTCCAAAATaGACTTTACATGCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: IESFYLQDRGNALNKHQLSSSPK*TLHALR
Trigger: CCTTAGAGCATGTAAAGTCCATTTTGGAGATGAGGA...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGAAGCAATTCTCCCATTTaGCCTCCCAAAGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRSNSPI*PPKVLE
Trigger: TTCCAGCACTTTGGGAGGCCAAATGGGAGAATTGCT...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAATTCCTCCTTCTTGTaGTGTCCAGGAGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQNSSFL*CPGACL
Trigger: CAAGCAAGCTCCTGGACACCACAAGAAGGAGGAATT...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCGAACGCTGACAAATaGAGTTCACTTCATTCAACA +
Preference number: 4 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTPNADK*SSLHST
Trigger: TGTTGAATGAAGTGAACTTCATTTGTCAGCGTTCGG...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR TCA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGAACAGCCAGCCATCTGTaGAATGATCCAACTTTCGAA +
Preference number: 4 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRTASHL*NDPTFE
Trigger: TTCGAAAGTTGGATCATTTCACAGATGGCTGGCTGT...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAATCAGATGTCTGCATATaGAAGACACAGAGATACAAA +
Preference number: 4 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQSDVCI*KTQRYK
Trigger: TTTGTATCTCTGTGTCTTTCATATGCAGACATCTGA...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR TCA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAACATTCAAGAGAAGTTaGGATTCACGAACTTTAGGA +
Preference number: 4 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQTFKRS*DSRTLG
Trigger: TCCTAAAGTTCGTGAATCTCAACTTCTCTTGAATGT...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR TCA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACAATGGGAGGAGGCATTTaGAACAACATGAGTATCTCA +
Preference number: 4 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTMGGGI*NNMSIS
Trigger: TGAGATACTCATGTTGTTTCAAATGCCTCCTCCCAT...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR GCA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGACAAATCAAGGTTCTaGTTTTGGGGCTACTTAAAA +
Preference number: 4 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQDKSRF*FWGYLK
Trigger: TTTTAAGTAGCCCCAAAAGCAGAACCTTGATTTGTC...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACAAAACCTATTTACAATTaGCAGCTGATGTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTKPIYN*QLMSLL
Trigger: CAGCAGGGACATCAGCTGGCAATTGTAAATAGGTTT...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR GCA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCACTGCTCACTCCTAAGTaGCTTTTACAAATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPLLTPK*LLQISF
Trigger: AAAGGAAATTTGTAAAAGGCACTTAGGAGTGAGCAG...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGATAAATGATTCCATGTaGATAGGGCATAACATACAG +
Preference number: 4 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKINDSM*IGHNIQ
Trigger: CTGTATGTTATGCCCTATCCACATGGAATCATTTAT...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR CCA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGCCTTTAGTATCTTaGCCAGTTTATTACAGAGGA +
Preference number: 4 (lower is better)
Translates to: IESFYLQDRGNALNKHQLKPLVS*PVYYRG
Trigger: TCCTCTGTAATAAACTGGCCAAGATACTAAAGGCTT...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR TCA 90 bp AACATACAGAGAATGAGACTATGCCAGAAATGGGAGGAGGCATTTGAAACAACAAAGCAAGAAGGCAGGTaGGTTTTCTCTATTAAACAA +
Preference number: 4 (lower is better)
Translates to: NIQRMRLCQKWEEAFETTKQEGR*VFSIKQ
Trigger: TTGTTTAATAGAGAAAACTCACCTGCCTTCTTGCTT...TGTTGTTTCAAATGCCTCCTCCCATTTCTGGCATAGTCTCATTCTCTGTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp AAAGAAAGAACTATCATGAAGGGGTGCAGACATGAATATTTTCAGCTGAAATCAGTCTTGTCAACAGAGTaGGACAGCCATCTCTACAAA +
Preference number: 4 (lower is better)
Translates to: KERTIMKGCRHEYFQLKSVLSTE*DSHLYK
Trigger: TTTGTAGAGATGGCTGTCTCACTCTGTTGACAAGAC...TGATTTCAGCTGAAAATATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGATCATCATATGGTATGTaGCACGAGTCTCCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRSSYGM*HESPVV
Trigger: AACAACTGGAGACTCGTGGCACATACCATATGATGA...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR GCA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCAAAGTGGCAAAGTCAATaGTCTTTCAAATCCTTCATT +
Preference number: 4 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPKWQSQ*SFKSFI
Trigger: AATGAAGGATTTGAAAGAGCATTGACTTTGCCACTT...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp AACATACAGAGAATGAGACTATGCCAGAAATGGGAGGAGGCATTTGAAACAACAACATTCATATTCTTCTaGACTCAGCTGAATAGACTC +
Preference number: 4 (lower is better)
Translates to: NIQRMRLCQKWEEAFETTTFIFF*TQLNRL
Trigger: GAGTCTATTCAGCTGAGTCCAGAAGAATATGAATGT...TGTTGTTTCAAATGCCTCCTCCCATTTCTGGCATAGTCTCATTCTCTGTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CCA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGACTATGCCAGAAATaGGAGGAGGCATTTGAAACA +
Preference number: 4 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQRLCQK*EEAFET
Trigger: TGTTTCAAATGCCTCCTCCCATTTCTGGCATAGTCT...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR CCA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACAAGAGCTCTTTTGTCTTaGTGTGCAGTAATGTTGCAT +
Preference number: 4 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTRALLS*CAVMLH
Trigger: ATGCAACATTACTGCACACCAAGACAAAAGAGCTCT...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACATCCCCTGGATACAGCTaGTTATTTCTTAGATATGAA +
Preference number: 4 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTSPGYS*LFLRYE
Trigger: TTCATATCTAAGAAATAATCAGCTGTATCCAGGGGA...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR CCA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGGGTGCAGAGTCGAAGTaGAACTTTTTAAAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQGAESK*NFLKGL
Trigger: CAAACCTTTTAAAAAGTTCCACTTCGACTCTGCACC...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGTATCCAATGTTTTCCTaGAGAGCTCTTTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQYPMFS*RALLSW
Trigger: CCAAGACAAAAGAGCTCTCCAGGAAAACATTGGATA...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR TCA 90 bp AAAGAAAGAACTATCATGAAGGGGTGCAGACATGAATATTTTCAGCTGAAATCAAAGAAAGAACTATCATaGAGGGGTGCAGACATGAAT +
Preference number: 4 (lower is better)
Translates to: KERTIMKGCRHEYFQLKSKKELS*RGADMN
Trigger: ATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTT...TGATTTCAGCTGAAAATATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR GCA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGAAATAGAAAGTCATTATaGAGTGAGATCAGCACCAGA +
Preference number: 4 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRNRKSL*SEISTR
Trigger: TCTGGTGCTGATCTCACTGCATAATGACTTTCTATT...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp AAAGAAAGAACTATCATGAAGGGGTGCAGACATGAATATTTTCAGCTGAAATCATCCAACTTTCGAAACTaGTCTTTCCGGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KERTIMKGCRHEYFQLKSSNFRN*SFRCFL
Trigger: AAGAAAACACCGGAAAGACCAGTTTCGAAAGTTGGA...TGATTTCAGCTGAAAATATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGAAAGCCTTTAGTATCTTaGCCAGTTTATTACAGAGGA +
Preference number: 4 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRKPLVS*PVYYRG
Trigger: TCCTCTGTAATAAACTGGCCAAGATACTAAAGGCTT...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR GCA 90 bp AAAGAAAGAACTATCATGAAGGGGTGCAGACATGAATATTTTCAGCTGAAATCATCTTTTGTCTTGGTGTaGAGTAATGTTGCATTCAGT +
Preference number: 4 (lower is better)
Translates to: KERTIMKGCRHEYFQLKSSFVLV*SNVAFS
Trigger: ACTGAATGCAACATTACTGCACACCAAGACAAAAGA...TGATTTCAGCTGAAAATATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CCA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGATAAATGATTCCATGTaGATAGGGCATAACATACAG +
Preference number: 4 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQINDSM*IGHNIQ
Trigger: CTGTATGTTATGCCCTATCCACATGGAATCATTTAT...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS CCA 90 bp GCCCTCACCCTGCATAGCTCTCTACAGACCGCAAAACTCCTCCGGTaGGGGGACGAGGAGGGAGGAGGTGGCGAGTCAGCTGCGCCAACG +
Preference number: 5 (lower is better)
Translates to: ALTLHSSLQTAKLLR*GDEEGGGGESAAPT
Trigger: CGTTGGCGCAGCTGACTCGCCACCTCCTCCCTCCTCGTCCCCCCACCGGAGGAGTTTTGCGGTCTGTAGAGAGCTATGCAGGGTGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321130.14
ENST00000603544.5
CDS TCA 90 bp AGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAGTaGGTTTTGGGAGGGGCAGCCCGTTGGGATGGCCCGGCCCTAAAC +
Preference number: 5 (lower is better)
Translates to: SSSSAPSDAQHLSKQ*VLGGAARWDGPALN
Trigger: GTTTAGGGCCGGGCCATCCCAACGGGCTGCCCCTCCCAAAACTCACTGTTTGGACAGGTGTTGGGCGTCGCTAGGCGCCGACGAAGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603588.1
ENST00000603611.5
CDS TCA 90 bp GGCAACAGAGCAAGACCCTTTACGGGGCCTGGCGGTGCTGACGCCTaGGCTGGTAGGGGTGGAGCAGGTAGGAAACAGCAAATGCAGAAG +
Preference number: 5 (lower is better)
Translates to: GNRARPFTGPGGADA*AGRGGAGRKQQMQK
Trigger: CTTCTGCATTTGCTGTTTCCTACCTGCTCCACCCCTACCAGCTCAGGCGTCAGCACCGCCAGGCCCCGTAAAGGGTCTTGCTCTGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603588.1
CDS CCA 90 bp GAAACAGCAAATGCAGAAGCTGCTGCGCGGAAGTCGGCCATGGACTaGAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGT +
Preference number: 5 (lower is better)
Translates to: ETANAEAAARKSAMD*KEVLRRRLATPNTC
Trigger: ACAGGTGTTGGGCGTCGCTAGGCGCCGACGAAGAACTTCTTTCCAGTCCATGGCCGACTTCCGCGCAGCAGCTTCTGCATTTGCTGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603588.1
ENST00000603611.5
CDS GCA 90 bp GAGCTGGTAGGGGTGGAGCAGGTAGGAAACAGCAAATGCAGAAGCTaGTGCGCGGAAGTCGGCCATGGACTGGAAAGAAGTTCTTCGTCG +
Preference number: 5 (lower is better)
Translates to: ELVGVEQVGNSKCRS*CAEVGHGLERSSSS
Trigger: CGACGAAGAACTTCTTTCCAGTCCATGGCCGACTTCCGCGCAGCAGCTTCTGCATTTGCTGTTTCCTACCTGCTCCACCCCTACCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000603588.1
ENST00000603611.5
CDS CCA 90 bp CAGCTGGCTTGCTTTTGCACCTCTTCCATCTCATCCCGACTCCACTaGGAACTCCGTCTTAGCATGTGCTTCCGGCCTAGGACCAGCAGT +
Preference number: 5 (lower is better)
Translates to: QLACFCTSSISSRLH*ELRLSMCFRPRTSS
Trigger: ACTGCTGGTCCTAGGCCGGAAGCACATGCTAAGACGGAGTTCCCAGTGGAGTCGGGATGAGATGGAAGAGGTGCAAAAGCAAGCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000557404.3
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS GCA 90 bp TCTTCCATCTCATCCCGACTCCACTGGGAACTCCGTCTTAGCATGTaGTTCCGGCCTAGGACCAGCAGTCGCAGATTCCGTTTGGCTAGT +
Preference number: 5 (lower is better)
Translates to: SSISSRLHWELRLSM*FRPRTSSRRFRLAS
Trigger: ACTAGCCAAACGGAATCTGCGACTGCTGGTCCTAGGCCGGAAGCACATGCTAAGACGGAGTTCCCAGTGGAGTCGGGATGAGATGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000557404.3
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCATCAGGCAGACAGGCCTaGTGGTCCCGCATCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPSGRQA*WSRIRS
Trigger: AGACCTGATGCGGGACCACAAGGCCTGTCTGCCTGA...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAAACAGGCGTTGGGTCTaGGCATCAGGCAGACAGGCC +
Preference number: 5 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPNRRWV*ASGRQA
Trigger: GGCCTGTCTGCCTGATGCCAAGACCCAACGCCTGTT...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTTCAGGCAGACAGGCCTaGTGGTCCCGCATCAGGTCT +
Preference number: 5 (lower is better)
Translates to: NTSSRASDANLEGTQTQTSGRQA*WSRIRS
Trigger: AGACCTGATGCGGGACCACAAGGCCTGTCTGCCTGA...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTAACAGGCGTTGGGTCTaGGCATCAGGCAGACAGGCC +
Preference number: 5 (lower is better)
Translates to: NTSSRASDANLEGTQTQTNRRWV*ASGRQA
Trigger: GGCCTGTCTGCCTGATGCCAAGACCCAACGCCTGTT...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGAACAGGCGTTGGGTCTaGGCATCAGGCAGACAGGCC +
Preference number: 5 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMNRRWV*ASGRQA
Trigger: GGCCTGTCTGCCTGATGCCAAGACCCAACGCCTGTT...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS TCA 90 bp CAGGCCTTGTGGTCCCGCATCAGGTCTCTTGTGATAAACCTGCAGTaGTTCCCGGAGTGCAGTGTGGCATACAGAAGGAATGGATCATCC +
Preference number: 5 (lower is better)
Translates to: QALWSRIRSLVINLQ*FPECSVAYRRNGSS
Trigger: GGATGATCCATTCCTTCTGTATGCCACACTGCACTCCGGGAATCACTGCAGGTTTATCACAAGAGACCTGATGCGGGACCACAAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000557404.3
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCGCCACGAGTCTCCAGTaGTTTGCACCACTGTGTCAT +
Preference number: 5 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTATSLQ*FAPLCH
Trigger: ATGACACAGTGGTGCAAACAACTGGAGACTCGTGGC...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp CAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGAATGGCTCATTGCAGCCTaGACCTCTGAGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: QNTNGQPKCLVPAASFREWLIAA*TSEAQA
Trigger: TGCTTGAGCCTCAGAGGTCAAGGCTGCAATGAGCCA...TTCCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTTCAGGCAGACAGGCCTaGTGGTCCCGCATCAGGTCT +
Preference number: 5 (lower is better)
Translates to: WIPKALLVTQAKWNSWPSSGRQA*WSRIRS
Trigger: AGACCTGATGCGGGACCACAAGGCCTGTCTGCCTGA...ACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCAACAGGCGTTGGGTCTaGGCATCAGGCAGACAGGCC +
Preference number: 5 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSNRRWV*ASGRQA
Trigger: GGCCTGTCTGCCTGATGCCAAGACCCAACGCCTGTT...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGTGGCTCATTGCAGCCTaGACCTCTGAGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMWLIAA*TSEAQA
Trigger: TGCTTGAGCCTCAGAGGTCAAGGCTGCAATGAGCCA...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTGCAAAATTAAAGAGATaGGGGGTCGGCGGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: NTSSRASDANLEGTQTQTAKLKR*GVGGAE
Trigger: CTCTGCACCGCCGACCCCCAATCTCTTTAATTTTGC...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR CAA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCCTGAGATATCTGGCCTaGGCAATCAGATTCGTTGCT +
Preference number: 5 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTLRYLA*AIRFVA
Trigger: AGCAACGAATCTGATTGCCAAGGCCAGATATCTCAG...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR CAA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCAGGTTGTGTTGGGAGTaGAATAGTGTTCCTCACAGG +
Preference number: 5 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTRLCWE*NSVPHR
Trigger: CCTGTGAGGAACACTATTCAACTCCCAACACAACCT...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR CAA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCACGAGTCTCCAGTTGTTaGCACCACTGTGTCATAGCT +
Preference number: 5 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPRVSSC*HHCVIA
Trigger: AGCTATGACACAGTGGTGCAAACAACTGGAGACTCG...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAGCCACGAGTCTCCAGTaGTTTGCACCACTGTGTCAT +
Preference number: 5 (lower is better)
Translates to: TNTSSRASDANLEGTQTQATSLQ*FAPLCH
Trigger: ATGACACAGTGGTGCAAACAACTGGAGACTCGTGGC...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCGGCAAAGCCATTTGGTaGGTACTTCACAGGAACATC +
Preference number: 5 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTGKAIW*VLHRNI
Trigger: GATGTTCCTGTGAAGTACCAACCAAATGGCTTTGCC...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAGGATTGATTCTGCTATaGGTAGGCCTGGAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPGLILL*VGLEGK
Trigger: CTTGCCTTCCAGGCCTACCAATAGCAGAATCAATCC...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGCAGTGGTGCAACGTaGGCTCATTGCAGCCTTGAC +
Preference number: 5 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSCSGAT*AHCSLD
Trigger: GTCAAGGCTGCAATGAGCCAACGTTGCACCACTGCA...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCGCTATGTTGCCCAGGTaGGTCTCCAACTCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLAMLPR*VSNSGP
Trigger: AGGCCCAGAGTTGGAGACCAACCTGGGCAACATAGC...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTAAGCAATTCTCCCATTaGGCCTCCCAAAGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFKQFSH*ASQSAG
Trigger: TCCAGCACTTTGGGAGGCCAAATGGGAGAATTGCTT...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTGTGGTGTCCAGGAGCTaGCTTGACAGGTACCTTTTT +
Preference number: 5 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFVVSRS*LDRYLF
Trigger: AAAAAGGTACCTGTCAAGCAAGCTCCTGGACACCAC...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp ATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACACTCAAGCAGACTGCTaGTCACTGGCCAGGACTGGG +
Preference number: 5 (lower is better)
Translates to: IAGPVGEMQVLLYTKFSNTQADC*SLARTG
Trigger: CCCAGTCCTGGCCAGTGACAAGCAGTCTGCTTGAGT...GTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS TCA 90 bp AAGAGAGGTACAGGAAGGGCGCTGCCTAGACTGCGTACCGAACGCTaGCAAATGAAGTTCACTTCATTCAACAACTCAAAGCGGCACTCA +
Preference number: 5 (lower is better)
Translates to: KRGTGRALPRLRTER*QMKFTSFNNSKRHS
Trigger: TGAGTGCCGCTTTGAGTTGTTGAATGAAGTGAACTTCATTTGTCAGCGTTCGGTACGCAGTCTAGGCAGCGCCCTTCCTGTACCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321130.14
ENST00000605201.1
CDS-3UTR CAA 90 bp TTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGGCAAAATTAAAGAGATaGGGGGTCGGCGGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: LSSGQRQCPKQTPAQEPLAKLKR*GVGGAE
Trigger: CTCTGCACCGCCGACCCCCAATCTCTTTAATTTTGC...CAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp GCAACCCTACAATGGTTCCCCACTCCTGGACAAGGGACAGATGCACTTCAGTTTAGGTTGTGTTGGGAGTaGAATAGTGTTCCTCACAGG +
Preference number: 5 (lower is better)
Translates to: ATLQWFPTPGQGTDALQFRLCWE*NSVPHR
Trigger: CCTGTGAGGAACACTATTCAACTCCCAACACAACCT...AAACTGAAGTGCATCTGTCCCTTGTCCAGGAGTGGGGAACCATTGTAGGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCATCAGGCAGACAGGCCTaGTGGTCCCGCATCAGGTCT +
Preference number: 5 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPSGRQA*WSRIRS
Trigger: AGACCTGATGCGGGACCACAAGGCCTGTCTGCCTGA...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAACAGGCGTTGGGTCTaGGCATCAGGCAGACAGGCC +
Preference number: 5 (lower is better)
Translates to: IESFYLQDRGNALNKHQLNRRWV*ASGRQA
Trigger: GGCCTGTCTGCCTGATGCCAAGACCCAACGCCTGTT...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCGAAACCTATTTACAATaGCCAGCTGATGTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTETYLQ*PADVPA
Trigger: AGCAGGGACATCAGCTGGCAATTGTAAATAGGTTTC...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCCGAGTCTCCAGTTGTTaGCACCACTGTGTCATAGCT +
Preference number: 5 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLRVSSC*HHCVIA
Trigger: AGCTATGACACAGTGGTGCAAACAACTGGAGACTCG...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAGGCAAAGCCATTTGGTaGGTACTTCACAGGAACATC +
Preference number: 5 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPGKAIW*VLHRNI
Trigger: GATGTTCCTGTGAAGTACCAACCAAATGGCTTTGCC...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCATGGAGGCAAAGCCATTaGGTTGGTACTTCACAGGAA +
Preference number: 5 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPWRQSH*VGTSQE
Trigger: TTCCTGTGAAGTACCAACCAAATGGCTTTGCCTCCA...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCGGAGAAATGCAGGTTTaGCTCTACACTAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTGEMQV*LYTKFS
Trigger: GGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCC...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCGTGGTGTCCAGGAGCTaGCTTGACAGGTACCTTTTT +
Preference number: 5 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLVVSRS*LDRYLF
Trigger: AAAAAGGTACCTGTCAAGCAAGCTCCTGGACACCAC...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp CCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAATTCCCACGGGAAGCTaGCTGGAAAGGGGGTGTAAA +
Preference number: 5 (lower is better)
Translates to: PKALLVTQAKWNSWPSRRIPTGS*LERGCK
Trigger: TTTACACCCCCTTTCCAGCAAGCTTCCCGTGGGAAT...TCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321130.14
ENST00000605870.5
CDS-3UTR CAA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTCGGACTGTGGTGAATaGTCCTTTCCATTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTSDCGE*SFPLFS
Trigger: GGAAAACAATGGAAAGGACAATTCACCACAGTCCGA...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS CCA 90 bp TTAGCATGTGCTTCCGGCCTAGGACCAGCAGTCGCAGATTCCGTTTaGCTAGTTGAGAGACGACATTCAAGAGAAGTTGAGATTCACGAA +
Preference number: 5 (lower is better)
Translates to: LACASGLGPAVADSV*LVERRHSREVEIHE
Trigger: TTCGTGAATCTCAACTTCTCTTGAATGTCGTCTCTCAACTAGCCAAACGGAATCTGCGACTGCTGGTCCTAGGCCGGAAGCACATGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000557404.3
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCATCAAGGTTCTGCTTTaGGGGCTACTTAAAAGCAAG +
Preference number: 5 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTIKVLL*GLLKSK
Trigger: CTTGCTTTTAAGTAGCCCCAAAAGCAGAACCTTGAT...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR CAA 90 bp CAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGAATGGCAATCAGATTCGTaGCTTTGGTATTCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: QNTNGQPKCLVPAASFREWQSDS*LWYSVE
Trigger: CTCCACAGAATACCAAAGCAACGAATCTGATTGCCA...TTCCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTCTGAGATATCTGGCCTaGGCAATCAGATTCGTTGCT +
Preference number: 5 (lower is better)
Translates to: NTSSRASDANLEGTQTQTLRYLA*AIRFVA
Trigger: AGCAACGAATCTGATTGCCAAGGCCAGATATCTCAG...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR CAA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAGAAACCTATTTACAATaGCCAGCTGATGTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPETYLQ*PADVPA
Trigger: AGCAGGGACATCAGCTGGCAATTGTAAATAGGTTTC...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCGCCACGAGTCTCCAGTaGTTTGCACCACTGTGTCAT +
Preference number: 5 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLATSLQ*FAPLCH
Trigger: ATGACACAGTGGTGCAAACAACTGGAGACTCGTGGC...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCGAATCTCTATGTCTTTaGGTGGAGGCAAAGCCATTT +
Preference number: 5 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTESLCL*VEAKPF
Trigger: AAATGGCTTTGCCTCCACCAAAAGACATAGAGATTC...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTGGATTGATTCTGCTATaGGTAGGCCTGGAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSGLILL*VGLEGK
Trigger: CTTGCCTTCCAGGCCTACCAATAGCAGAATCAATCC...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTCAGGGACAGATGGATaGATTCTGCTATTGGTAGGC +
Preference number: 5 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLSGTDG*ILLLVG
Trigger: GCCTACCAATAGCAGAATCAATCCATCTGTCCCTGA...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCATTCCCACGGGAAGCTaGCTGGAAAGGGGGTGTAAA +
Preference number: 5 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLIPTGS*LERGCK
Trigger: TTTACACCCCCTTTCCAGCAAGCTTCCCGTGGGAAT...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321130.14
ENST00000605870.5
CDS TCA 90 bp GCTGCTACCCATGCCAGCAGAGATTTAGCCACATCTATAGAGCTATaGCAGCCAGCCATCTGTGAAATGATCCAACTTTCGAAACTGGTC +
Preference number: 5 (lower is better)
Translates to: AATHASRDLATSIEL*QPAICEMIQLSKLV
Trigger: GACCAGTTTCGAAAGTTGGATCATTTCACAGATGGCTGGCTGTCATAGCTCTATAGATGTGGCTAAATCTCTGCTGGCATGGGTAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR CAA 90 bp TCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTGGCAATCAGATTCGTaGCTTTGGTATTCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: SPKLSGIAGPVGEMQVLLWQSDS*LWYSVE
Trigger: CTCCACAGAATACCAAAGCAACGAATCTGATTGCCA...GAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGTGGCAATCAGATTCGTaGCTTTGGTATTCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMWQSDS*LWYSVE
Trigger: CTCCACAGAATACCAAAGCAACGAATCTGATTGCCA...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR CAA 90 bp CCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTAGGAGACTGAGATATCTGGCCTaGGCAATCAGATTCGTTGCT +
Preference number: 5 (lower is better)
Translates to: PKALLVTQAKWNSWPSRRLRYLA*AIRFVA
Trigger: AGCAACGAATCTGATTGCCAAGGCCAGATATCTCAG...TCTCCTACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGACAATACCATTATTTTaGGCTGCTACCCATGCCAGC +
Preference number: 5 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMTIPLF*AATHAS
Trigger: GCTGGCATGGGTAGCAGCCAAAAATAATGGTATTGT...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR CAA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGGAAACCTATTTACAATaGCCAGCTGATGTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMETYLQ*PADVPA
Trigger: AGCAGGGACATCAGCTGGCAATTGTAAATAGGTTTC...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTGGAGAAATGCAGGTTTaGCTCTACACTAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: NTSSRASDANLEGTQTQTGEMQV*LYTKFS
Trigger: GGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCC...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTCAGGGACAGATGGATaGATTCTGCTATTGGTAGGC +
Preference number: 5 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSSGTDG*ILLLVG
Trigger: GCCTACCAATAGCAGAATCAATCCATCTGTCCCTGA...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGGAGAGCTCTTTTGTCTaGGTGTGCAGTAATGTTGCA +
Preference number: 5 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMESSFV*VCSNVA
Trigger: TGCAACATTACTGCACACCAAGACAAAAGAGCTCTC...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp AACATACAGAGAATGAGACTATGCCAGAAATGGGAGGAGGCATTTGAAACAACAACTCAAGCAGACTGCTaGTCACTGGCCAGGACTGGG +
Preference number: 5 (lower is better)
Translates to: NIQRMRLCQKWEEAFETTTQADC*SLARTG
Trigger: CCCAGTCCTGGCCAGTGACAAGCAGTCTGCTTGAGT...TGTTGTTTCAAATGCCTCCTCCCATTTCTGGCATAGTCTCATTCTCTGTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp CAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGAAAGGAACAGAATAAACTaGCTTATTACTGCCCTCATC +
Preference number: 5 (lower is better)
Translates to: QNTNGQPKCLVPAASFRERNRIN*LITALI
Trigger: GATGAGGGCAGTAATAAGCAAGTTTATTCTGTTCCT...TTCCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAAGGAACAGAATAAACTaGCTTATTACTGCCCTCATC +
Preference number: 5 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPRNRIN*LITALI
Trigger: GATGAGGGCAGTAATAAGCAAGTTTATTCTGTTCCT...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR CAA 90 bp TTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGACAATACCATTATTTTaGGCTGCTACCCATGCCAGC +
Preference number: 5 (lower is better)
Translates to: LSSGQRQCPKQTPAQEPLTIPLF*AATHAS
Trigger: GCTGGCATGGGTAGCAGCCAAAAATAATGGTATTGT...CAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR CAA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCGGAGTTATAACTTTTTaGATGTCCTCTAACAGCAAC +
Preference number: 5 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTGVITF*MSSNSN
Trigger: GTTGCTGTTAGAGGACATCAAAAAAGTTATAACTCC...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS-3UTR CAA 90 bp GGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAACCGCTGAAAGGTTAGTTTaGATCCTGGAAACCTATTTA +
Preference number: 5 (lower is better)
Translates to: GQRQCPKQTPAQEPLMPTAERLV*ILETYL
Trigger: TAAATAGGTTTCCAGGATCAAAACTAACCTTTCAGC...GGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCAGCCACGAGTCTCCAGTaGTTTGCACCACTGTGTCAT +
Preference number: 5 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPATSLQ*FAPLCH
Trigger: ATGACACAGTGGTGCAAACAACTGGAGACTCGTGGC...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp ATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTGGAGGCAAAGCCATTaGGTTGGTACTTCACAGGAA +
Preference number: 5 (lower is better)
Translates to: IAGPVGEMQVLLYTKFSNWRQSH*VGTSQE
Trigger: TTCCTGTGAAGTACCAACCAAATGGCTTTGCCTCCA...GTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAGAATCTCTATGTCTTTaGGTGGAGGCAAAGCCATTT +
Preference number: 5 (lower is better)
Translates to: TNTSSRASDANLEGTQTQESLCL*VEAKPF
Trigger: AAATGGCTTTGCCTCCACCAAAAGACATAGAGATTC...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGGGATTGATTCTGCTATaGGTAGGCCTGGAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQEGLILL*VGLEGK
Trigger: CTTGCCTTCCAGGCCTACCAATAGCAGAATCAATCC...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTCAGGGACAGATGGATaGATTCTGCTATTGGTAGGC +
Preference number: 5 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLSGTDG*ILLLVG
Trigger: GCCTACCAATAGCAGAATCAATCCATCTGTCCCTGA...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp ATCAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGTGGCGACAGAGTAAGTaGAGACTCTATTTCCAAAAA +
Preference number: 5 (lower is better)
Translates to: IRTQMGSLSVWYQLLPSGWRQSK*RLYFQK
Trigger: TTTTTGGAAATAGAGTCTCAACTTACTCTGTCGCCA...CCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTCCTGGAGAGCTCTTTaGTCTTGGTGTGCAGTAATG +
Preference number: 5 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLSWRAL*SWCAVM
Trigger: CATTACTGCACACCAAGACAAAAGAGCTCTCCAGGA...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCACTATGTGCTCCTTTTTaGGGAATTTGCATTAGCCTT +
Preference number: 5 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPLCAPF*GICISL
Trigger: AAGGCTAATGCAAATTCCCAAAAAAGGAGCACATAG...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAGAATTGTCCTTTCCATaGTTTTCCAGGAACACTCTC +
Preference number: 5 (lower is better)
Translates to: TNTSSRASDANLEGTQTQELSFP*FSRNTL
Trigger: GAGAGTGTTCCTGGAAAACAATGGAAAGGACAATTC...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534898.9
ENST00000604948.5
CDS-3UTR CAA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGGTTGTGTTGGGAGTaGAATAGTGTTCCTCACAGG +
Preference number: 5 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKRLCWE*NSVPHR
Trigger: CCTGTGAGGAACACTATTCAACTCCCAACACAACCT...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR CAA 90 bp ATCAGAACACAAATGGGCAGCCTAAGTGTCTGGTACCAGCTGCTTCCTTCAGGGAACATTTTGGCAACATaGAGACCATCAATGACAACA +
Preference number: 5 (lower is better)
Translates to: IRTQMGSLSVWYQLLPSGNILAT*RPSMTT
Trigger: TGTTGTCATTGATGGTCTCAATGTTGCCAAAATGTT...CCCTGAAGGAAGCAGCTGGTACCAGACACTTAGGCTGCCCATTTGTGTTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp TCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGGACATTCAAGAGAAGTaGAGATTCACGAACTTTAGG +
Preference number: 5 (lower is better)
Translates to: SSGQRQCPKQTPAQEPLMDIQEK*RFTNFR
Trigger: CCTAAAGTTCGTGAATCTCAACTTCTCTTGAATGTC...CATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp AAAGAAAGAACTATCATGAAGGGGTGCAGACATGAATATTTTCAGCTGAAATCAAACAGGCGTTGGGTCTaGGCATCAGGCAGACAGGCC +
Preference number: 5 (lower is better)
Translates to: KERTIMKGCRHEYFQLKSNRRWV*ASGRQA
Trigger: GGCCTGTCTGCCTGATGCCAAGACCCAACGCCTGTT...TGATTTCAGCTGAAAATATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTGAAACCTATTTACAATaGCCAGCTGATGTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: WIPKALLVTQAKWNSWPSETYLQ*PADVPA
Trigger: AGCAGGGACATCAGCTGGCAATTGTAAATAGGTTTC...ACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCGAAACCTATTTACAATaGCCAGCTGATGTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLETYLQ*PADVPA
Trigger: AGCAGGGACATCAGCTGGCAATTGTAAATAGGTTTC...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp TCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGATGCCAGCTGAAAGGTTAGTTTaGATCCTGGAAACCTATTTA +
Preference number: 5 (lower is better)
Translates to: SGQRQCPKQTPAQEPLMPAERLV*ILETYL
Trigger: TAAATAGGTTTCCAGGATCAAAACTAACCTTTCAGC...TGGCATCAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCCGAGTCTCCAGTTGTTaGCACCACTGTGTCATAGCT +
Preference number: 5 (lower is better)
Translates to: IESFYLQDRGNALNKHQLRVSSC*HHCVIA
Trigger: AGCTATGACACAGTGGTGCAAACAACTGGAGACTCG...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCGGAGAAATGCAGGTTTaGCTCTACACTAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSGEMQV*LYTKFS
Trigger: GGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCC...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAATGGCGACAGAGTAAGTaGAGACTCTATTTCCAAAAA +
Preference number: 5 (lower is better)
Translates to: TNTSSRASDANLEGTQTQWRQSK*RLYFQK
Trigger: TTTTTGGAAATAGAGTCTCAACTTACTCTGTCGCCA...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGTCCTGGAGAGCTCTTTaGTCTTGGTGTGCAGTAATG +
Preference number: 5 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQESWRAL*SWCAVM
Trigger: CATTACTGCACACCAAGACAAAAGAGCTCTCCAGGA...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGAGCTATGTTGCCCAGGTaGGTCTCCAACTCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRAMLPR*VSNSGP
Trigger: AGGCCCAGAGTTGGAGACCAACCTGGGCAACATAGC...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTTCGGACTGTGGTGAATaGTCCTTTCCATTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: WIPKALLVTQAKWNSWPSSDCGE*SFPLFS
Trigger: GGAAAACAATGGAAAGGACAATTCACCACAGTCCGA...ACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534898.9
ENST00000605870.5
CDS CCA 90 bp GGTTGGTACTTCACAGGAACATCTTTCTACCAAGTCTTCATCATATaGTATGTGCCACGAGTCTCCAGTTGTTTGCACCACTGTGTCATA +
Preference number: 5 (lower is better)
Translates to: GWYFTGTSFYQVFII*YVPRVSSCLHHCVI
Trigger: TATGACACAGTGGTGCAAACAACTGGAGACTCGTGGCACATACCATATGATGAAGACTTGGTAGAAAGATGTTCCTGTGAAGTACCAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCATCAAGGTTCTGCTTTaGGGGCTACTTAAAAGCAAG +
Preference number: 5 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSIKVLL*GLLKSK
Trigger: CTTGCTTTTAAGTAGCCCCAAAAGCAGAACCTTGAT...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp AACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAACTAACATTTTGGCAACATaGAGACCATCAATGACAACA +
Preference number: 5 (lower is better)
Translates to: NTSSRASDANLEGTQTQTNILAT*RPSMTT
Trigger: TGTTGTCATTGATGGTCTCAATGTTGCCAAAATGTT...AGTTTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp ACAAACACCAGCTCAAGAGCCTCTGATGCCAACCTAGAGGGTACCCAAACACAAAACATTTTGGCAACATaGAGACCATCAATGACAACA +
Preference number: 5 (lower is better)
Translates to: TNTSSRASDANLEGTQTQNILAT*RPSMTT
Trigger: TGTTGTCATTGATGGTCTCAATGTTGCCAAAATGTT...TTGTGTTTGGGTACCCTCTAGGTTGGCATCAGAGGCTCTTGAGCTGGTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTGACATTCAAGAGAAGTaGAGATTCACGAACTTTAGG +
Preference number: 5 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSDIQEK*RFTNFR
Trigger: CCTAAAGTTCGTGAATCTCAACTTCTCTTGAATGTC...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGGAAACCTATTTACAATaGCCAGCTGATGTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKETYLQ*PADVPA
Trigger: AGCAGGGACATCAGCTGGCAATTGTAAATAGGTTTC...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCAGGCAAAGCCATTTGGTaGGTACTTCACAGGAACATC +
Preference number: 5 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPGKAIW*VLHRNI
Trigger: GATGTTCCTGTGAAGTACCAACCAAATGGCTTTGCC...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAATGGAGGCAAAGCCATTaGGTTGGTACTTCACAGGAA +
Preference number: 5 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQWRQSH*VGTSQE
Trigger: TTCCTGTGAAGTACCAACCAAATGGCTTTGCCTCCA...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCGAATCTCTATGTCTTTaGGTGGAGGCAAAGCCATTT +
Preference number: 5 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSESLCL*VEAKPF
Trigger: AAATGGCTTTGCCTCCACCAAAAGACATAGAGATTC...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGGGAGAAATGCAGGTTTaGCTCTACACTAAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKGEMQV*LYTKFS
Trigger: GGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCC...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp ATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACGAATTGTCCTTTCCATaGTTTTCCAGGAACACTCTC +
Preference number: 5 (lower is better)
Translates to: IAGPVGEMQVLLYTKFSNELSFP*FSRNTL
Trigger: GAGAGTGTTCCTGGAAAACAATGGAAAGGACAATTC...GTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534898.9
CDS TCA 90 bp CTCATGATTTTTCCCTTAAGACATTCATATTCTTCTGGACTCAGCTaGATAGACTCTATGGTTTTTCCACAGCCCGAACACTGGCCACTC +
Preference number: 5 (lower is better)
Translates to: LMIFPLRHSYSSGLS*IDSMVFPQPEHWPL
Trigger: GAGTGGCCAGTGTTCGGGCTGTGGAAAAACCATAGAGTCTATTCAGCTGAGTCCAGAAGAATATGAATGTCTTAAGGGAAAAATCATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000603544.5
CDS TCA 90 bp CTCATGATTTTTCCCTTAAGACATTCATATTCTTCTGGACTCAGCTaGATAGACTCTATGGTTTTTCCACAGCCCGAACACTGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: LMIFPLRHSYSSGLS*IDSMVFPQPEHWPV
Trigger: CACTGGCCAGTGTTCGGGCTGTGGAAAAACCATAGAGTCTATTCAGCTGAGTCCAGAAGAATATGAATGTCTTAAGGGAAAAATCATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321130.14
ENST00000557404.3
CDS TCA 90 bp CTCATGATTTTTCCCTTAAGACATTCATATTCTTCTGGACTCAGCTaGATAGACTCTATGGTTTTTCCACAGCCCGAACACTGGCCACTG +
Preference number: 5 (lower is better)
Translates to: LMIFPLRHSYSSGLS*IDSMVFPQPEHWPL
Trigger: CAGTGGCCAGTGTTCGGGCTGTGGAAAAACCATAGAGTCTATTCAGCTGAGTCCAGAAGAATATGAATGTCTTAAGGGAAAAATCATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000603588.1
CDS-3UTR CAA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCAACAATACCATTATTTTaGGCTGCTACCCATGCCAGC +
Preference number: 5 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPTIPLF*AATHAS
Trigger: GCTGGCATGGGTAGCAGCCAAAAATAATGGTATTGT...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp AGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAACAATACCATTATTTTaGGCTGCTACCCATGCCAGC +
Preference number: 5 (lower is better)
Translates to: RILLSSGQRQCPKQTPAQTIPLF*AATHAS
Trigger: GCTGGCATGGGTAGCAGCCAAAAATAATGGTATTGT...TTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR CAA 90 bp TGGATACCAAAAGCACTATTAGTCACCCAAGCTAAGTGGAATAGCTGGCCCAGTGACATTCAAGAGAAGTaGAGATTCACGAACTTTAGG +
Preference number: 5 (lower is better)
Translates to: WIPKALLVTQAKWNSWPSDIQEK*RFTNFR
Trigger: CCTAAAGTTCGTGAATCTCAACTTCTCTTGAATGTC...ACTGGGCCAGCTATTCCACTTAGCTTGGGTGACTAATAGTGCTTTTGGTATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTGCTGAAAGGTTAGTTTaGATCCTGGAAACCTATTTA +
Preference number: 5 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSAERLV*ILETYL
Trigger: TAAATAGGTTTCCAGGATCAAAACTAACCTTTCAGC...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp TTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCTGGCTGAAAGGTTAGTTTaGATCCTGGAAACCTATTTA +
Preference number: 5 (lower is better)
Translates to: LSSGQRQCPKQTPAQEPLAERLV*ILETYL
Trigger: TAAATAGGTTTCCAGGATCAAAACTAACCTTTCAGC...CAGAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACGAGTCTCCAGTTGTTaGCACCACTGTGTCATAGCT +
Preference number: 5 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTRVSSC*HHCVIA
Trigger: AGCTATGACACAGTGGTGCAAACAACTGGAGACTCG...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGGCCACGAGTCTCCAGTaGTTTGCACCACTGTGTCAT +
Preference number: 5 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQATSLQ*FAPLCH
Trigger: ATGACACAGTGGTGCAAACAACTGGAGACTCGTGGC...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR CAA 90 bp CCAGGTCATCTTCCTGGGTCTGTTCCTCATCTCCAAAATGGACTTTACATGCTCGCCTGTTCTTGCATATaGAATACAGTATGTATACGT +
Preference number: 5 (lower is better)
Translates to: PGHLPGSVPHLQNGLYMLACSCI*NTVCIR
Trigger: ACGTATACATACTGTATTCAATATGCAAGAACAGGC...GAGCATGTAAAGTCCATTTTGGAGATGAGGAACAGACCCAGGAAGATGACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCCTATGTGCTCCTTTTTaGGGAATTTGCATTAGCCTT +
Preference number: 5 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLLCAPF*GICISL
Trigger: AAGGCTAATGCAAATTCCCAAAAAAGGAGCACATAG...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp GCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTCTGTGTTCCTGTCTCTaGTATTTTCATCCTGTTAAT +
Preference number: 5 (lower is better)
Translates to: AGPVGEMQVLLYTKFSNSLCSCL*YFHPVN
Trigger: ATTAACAGGATGAAAATACAAGAGACAGGAACACAG...AGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCTCGGACTGTGGTGAATaGTCCTTTCCATTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: IESFYLQDRGNALNKHQLSDCGE*SFPLFS
Trigger: GGAAAACAATGGAAAGGACAATTCACCACAGTCCGA...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS TCA 90 bp CAGAGATTTAGCCACATCTATAGAGCTATGACAGCCAGCCATCTGTaGAATGATCCAACTTTCGAAACTGGTCTTTCCGGTGTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: QRFSHIYRAMTASHL*NDPTFETGLSGVFF
Trigger: AAAGAAAACACCGGAAAGACCAGTTTCGAAAGTTGGATCATTTCACAGATGGCTGGCTGTCATAGCTCTATAGATGTGGCTAAATCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS TCA 90 bp CTCATGATTTTTCCCTTAAGACATTCATATTCTTCTGGACTCAGCTaGATAGACTCTATGGTTTTTCCACAGCCCGAACACTGGCCACTT +
Preference number: 5 (lower is better)
Translates to: LMIFPLRHSYSSGLS*IDSMVFPQPEHWPL
Trigger: AAGTGGCCAGTGTTCGGGCTGTGGAAAAACCATAGAGTCTATTCAGCTGAGTCCAGAAGAATATGAATGTCTTAAGGGAAAAATCATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS CCA 90 bp GAGATATCTGGCCTTGGCAATCAGATTCGTTGCTTTGGTATTCTGTaGAGACATTGTTTTAAGAGAAAACAACCTCTGCTGGTTCCTGAT +
Preference number: 5 (lower is better)
Translates to: EISGLGNQIRCFGIL*RHCFKRKQPLLVPD
Trigger: ATCAGGAACCAGCAGAGGTTGTTTTCTCTTAAAACAATGTCTCCACAGAATACCAAAGCAACGAATCTGATTGCCAAGGCCAGATATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS-3UTR CAA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACAAGGTTGTGTTGGGAGTaGAATAGTGTTCCTCACAGG +
Preference number: 5 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTRLCWE*NSVPHR
Trigger: CCTGTGAGGAACACTATTCAACTCCCAACACAACCT...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR CAA 90 bp TCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCAACATTTTGGCAACATaGAGACCATCAATGACAACA +
Preference number: 5 (lower is better)
Translates to: SFYLQDRGNALNKHQLKSNILAT*RPSMTT
Trigger: TGTTGTCATTGATGGTCTCAATGTTGCCAAAATGTT...GCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGGACATTCAAGAGAAGTaGAGATTCACGAACTTTAGG +
Preference number: 5 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQEDIQEK*RFTNFR
Trigger: CCTAAAGTTCGTGAATCTCAACTTCTCTTGAATGTC...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGGACATTCAAGAGAAGTaGAGATTCACGAACTTTAGG +
Preference number: 5 (lower is better)
Translates to: ESFYLQDRGNALNKHQLKDIQEK*RFTNFR
Trigger: CCTAAAGTTCGTGAATCTCAACTTCTCTTGAATGTC...CTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGACGAGTCTCCAGTTGTTaGCACCACTGTGTCATAGCT +
Preference number: 5 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRRVSSC*HHCVIA
Trigger: AGCTATGACACAGTGGTGCAAACAACTGGAGACTCG...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR CAA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACAGGCAAAGCCATTTGGTaGGTACTTCACAGGAACATC +
Preference number: 5 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTGKAIW*VLHRNI
Trigger: GATGTTCCTGTGAAGTACCAACCAAATGGCTTTGCC...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACATGGAGGCAAAGCCATTaGGTTGGTACTTCACAGGAA +
Preference number: 5 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTWRQSH*VGTSQE
Trigger: TTCCTGTGAAGTACCAACCAAATGGCTTTGCCTCCA...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp ATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCGAATCTCTATGTCTTTaGGTGGAGGCAAAGCCATTT +
Preference number: 5 (lower is better)
Translates to: IESFYLQDRGNALNKHQLESLCL*VEAKPF
Trigger: AAATGGCTTTGCCTCCACCAAAAGACATAGAGATTC...GAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp TTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGCCTCGCCTGTTCTTGCATATaGAATACAGTATGTATACGT +
Preference number: 5 (lower is better)
Translates to: FYLQDRGNALNKHQLKSLACSCI*NTVCIR
Trigger: ACGTATACATACTGTATTCAATATGCAAGAACAGGC...GAGGCTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp ATAGCTGGCCCAGTAGGAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACCTGTGTTCCTGTCTCTaGTATTTTCATCCTGTTAAT +
Preference number: 5 (lower is better)
Translates to: IAGPVGEMQVLLYTKFSNLCSCL*YFHPVN
Trigger: ATTAACAGGATGAAAATACAAGAGACAGGAACACAG...GTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTCCTACTGGGCCAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp ATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACACCAGCTCAAGAGGGAGTTATAACTTTTTaGATGTCCTCTAACAGCAAC +
Preference number: 5 (lower is better)
Translates to: ILLSSGQRQCPKQTPAQEGVITF*MSSNSN
Trigger: GTTGCTGTTAGAGGACATCAAAAAAGTTATAACTCC...CTCTTGAGCTGGTGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000604948.5
CDS-3UTR CAA 90 bp TTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAGATCAGGGACAGATGGATaGATTCTGCTATTGGTAGGC +
Preference number: 5 (lower is better)
Translates to: LLQRTINDSMWIGHNIQRSGTDG*ILLLVG
Trigger: GCCTACCAATAGCAGAATCAATCCATCTGTCCCTGA...TCTCTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR CAA 90 bp AAAGAAAGAACTATCATGAAGGGGTGCAGACATGAATATTTTCAGCTGAAATCAAAGCAATTCTCCCATTaGGCCTCCCAAAGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: KERTIMKGCRHEYFQLKSKQFSH*ASQSAG
Trigger: TCCAGCACTTTGGGAGGCCAAATGGGAGAATTGCTT...TGATTTCAGCTGAAAATATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS CCA 90 bp ATAGAGGTAAGAATCTCTATGTCTTTTGGTGGAGGCAAAGCCATTTaGTTGGTACTTCACAGGAACATCTTTCTACCAAGTCTTCATCAT +
Preference number: 5 (lower is better)
Translates to: IEVRISMSFGGGKAI*LVLHRNIFLPSLHH
Trigger: ATGATGAAGACTTGGTAGAAAGATGTTCCTGTGAAGTACCAACCAAATGGCTTTGCCTCCACCAAAAGACATAGAGATTCTTACCTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp GAGAAATGCAGGTTTTGCTCTACACTAAGTTCTCCAACTCTTGATAAGCCTCCAGCTGAAAGGTTAGTTTaGATCCTGGAAACCTATTTA +
Preference number: 5 (lower is better)
Translates to: EKCRFCSTLSSPTLDKPPAERLV*ILETYL
Trigger: TAAATAGGTTTCCAGGATCAAAACTAACCTTTCAGC...TGGAGGCTTATCAAGAGTTGGAGAACTTAGTGTAGAGCAAAACCTGCATTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000605870.5
CDS-3UTR CAA 90 bp AAAGAAAGAACTATCATGAAGGGGTGCAGACATGAATATTTTCAGCTGAAATCATGGAGGCAAAGCCATTaGGTTGGTACTTCACAGGAA +
Preference number: 5 (lower is better)
Translates to: KERTIMKGCRHEYFQLKSWRQSH*VGTSQE
Trigger: TTCCTGTGAAGTACCAACCAAATGGCTTTGCCTCCA...TGATTTCAGCTGAAAATATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACAGAATCTCTATGTCTTTaGGTGGAGGCAAAGCCATTT +
Preference number: 5 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTESLCL*VEAKPF
Trigger: AAATGGCTTTGCCTCCACCAAAAGACATAGAGATTC...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGATCAAGGTTCTGCTTTaGGGGCTACTTAAAAGCAAG +
Preference number: 5 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQIKVLL*GLLKSK
Trigger: CTTGCTTTTAAGTAGCCCCAAAAGCAGAACCTTGAT...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACAAGGAACAGAATAAACTaGCTTATTACTGCCCTCATC +
Preference number: 5 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTRNRIN*LITALI
Trigger: GATGAGGGCAGTAATAAGCAAGTTTATTCTGTTCCT...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS-3UTR CAA 90 bp GCTGTTAATAGAATCCTTTTATCTTCAGGACAGAGGCAATGCCCTAAACAAACAAACATTTTGGCAACATaGAGACCATCAATGACAACA +
Preference number: 5 (lower is better)
Translates to: AVNRILLSSGQRQCPKQTNILAT*RPSMTT
Trigger: TGTTGTCATTGATGGTCTCAATGTTGCCAAAATGTT...TGTTTGTTTAGGGCATTGCCTCTGTCCTGAAGATAAAAGGATTCTATTAACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000604948.5
ENST00000605870.5
CDS-3UTR CAA 90 bp AGTTTATTACAGAGGACGATAAATGATTCCATGTGGATAGGGCATAACATACAGAACATTTTGGCAACATaGAGACCATCAATGACAACA +
Preference number: 5 (lower is better)
Translates to: SLLQRTINDSMWIGHNIQNILAT*RPSMTT
Trigger: TGTTGTCATTGATGGTCTCAATGTTGCCAAAATGTT...CTGTATGTTATGCCCTATCCACATGGAATCATTTATCGTCCTCTGTAATAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
CDS-3UTR CAA 90 bp AAAGAAAGAACTATCATGAAGGGGTGCAGACATGAATATTTTCAGCTGAAATCAGGAGTTATAACTTTTTaGATGTCCTCTAACAGCAAC +
Preference number: 5 (lower is better)
Translates to: KERTIMKGCRHEYFQLKSGVITF*MSSNSN
Trigger: GTTGCTGTTAGAGGACATCAAAAAAGTTATAACTCC...TGATTTCAGCTGAAAATATTCATGTCTGCACCCCTTCATGATAGTTCTTTCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS TCA 72 bp TCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAGTaGGTTTTGGGAGGGGCAGCCCGTTGGGATGGCCCG +
Preference number: 6 (lower is better)
Translates to: SAPSDAQHLSKQ*VLGGAARWDGP
Trigger: CGGGCCATCCCAACGGGCTGCCCCTCCCAAAACTCACTGTTTGGACAGGTGTTGGGCGTCGCTAGGCGCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000603588.1
ENST00000603611.5
CDS TCA 72 bp GCAAGACCCTTTACGGGGCCTGGCGGTGCTGACGCCTaGGCTGGTAGGGGTGGAGCAGGTAGGAAACAGCAA +
Preference number: 6 (lower is better)
Translates to: ARPFTGPGGADA*AGRGGAGRKQQ
Trigger: TTGCTGTTTCCTACCTGCTCCACCCCTACCAGCTCAGGCGTCAGCACCGCCAGGCCCCGTAAAGGGTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603588.1
CDS CCA 72 bp AATGCAGAAGCTGCTGCGCGGAAGTCGGCCATGGACTaGAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCC +
Preference number: 6 (lower is better)
Translates to: NAEAAARKSAMD*KEVLRRRLATP
Trigger: GGGCGTCGCTAGGCGCCGACGAAGAACTTCTTTCCAGTCCATGGCCGACTTCCGCGCAGCAGCTTCTGCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603588.1
ENST00000603611.5
CDS GCA 72 bp TCATCCCGACTCCACTGGGAACTCCGTCTTAGCATGTaGTTCCGGCCTAGGACCAGCAGTCGCAGATTCCGT +
Preference number: 6 (lower is better)
Translates to: SSRLHWELRLSM*FRPRTSSRRFR
Trigger: ACGGAATCTGCGACTGCTGGTCCTAGGCCGGAAGCACATGCTAAGACGGAGTTCCCAGTGGAGTCGGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000557404.3
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS GCA 72 bp AAACAACCTCTGCTGGTTCCTGATGCCACAGCGGTCTaGCAGAAACAGCGAGACATAAGAGTGCCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: KQPLLVPDATAV*QKQRDIRVPWA
Trigger: GGCCCAGGGCACTCTTATGTCTCGCTGTTTCTGGCAGACCGCTGTGGCATCAGGAACCAGCAGAGGTTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS CCA 72 bp TGCTTTTGCACCTCTTCCATCTCATCCCGACTCCACTaGGAACTCCGTCTTAGCATGTGCTTCCGGCCTAGG +
Preference number: 6 (lower is better)
Translates to: CFCTSSISSRLH*ELRLSMCFRPR
Trigger: CCTAGGCCGGAAGCACATGCTAAGACGGAGTTCCCAGTGGAGTCGGGATGAGATGGAAGAGGTGCAAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000557404.3
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS CCA 72 bp GCTTCCGGCCTAGGACCAGCAGTCGCAGATTCCGTTTaGCTAGTTGAGAGACGACATTCAAGAGAAGTTGAG +
Preference number: 6 (lower is better)
Translates to: ASGLGPAVADSV*LVERRHSREVE
Trigger: CTCAACTTCTCTTGAATGTCGTCTCTCAACTAGCCAAACGGAATCTGCGACTGCTGGTCCTAGGCCGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000557404.3
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS TCA 72 bp TGGTCCCGCATCAGGTCTCTTGTGATAAACCTGCAGTaGTTCCCGGAGTGCAGTGTGGCATACAGAAGGAAT +
Preference number: 6 (lower is better)
Translates to: WSRIRSLVINLQ*FPECSVAYRRN
Trigger: ATTCCTTCTGTATGCCACACTGCACTCCGGGAATCACTGCAGGTTTATCACAAGAGACCTGATGCGGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000557404.3
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS TCA 72 bp GGGCGCTGCCTAGACTGCGTACCGAACGCTGACAAATaGAGTTCACTTCATTCAACAACTCAAAGCGGCACT +
Preference number: 6 (lower is better)
Translates to: GRCLDCVPNADK*SSLHSTTQSGT
Trigger: AGTGCCGCTTTGAGTTGTTGAATGAAGTGAACTTCATTTGTCAGCGTTCGGTACGCAGTCTAGGCAGCGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321130.14
ENST00000605201.1
CDS TCA 72 bp CACAGCCCGAACACTGGCCACTTTTTCGGACTGTGGTaGATTGTCCTTTCCATTGTTTTCCAGGAACAGTGG +
Preference number: 6 (lower is better)
Translates to: HSPNTGHFFGLW*IVLSIVFQEQW
Trigger: CCACTGTTCCTGGAAAACAATGGAAAGGACAATTCACCACAGTCCGAAAAAGTGGCCAGTGTTCGGGCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605870.5
CDS TCA 72 bp ACAGGAAGGGCGCTGCCTAGACTGCGTACCGAACGCTaGCAAATGAAGTTCACTTCATTCAACAACTCAAAG +
Preference number: 6 (lower is better)
Translates to: TGRALPRLRTER*QMKFTSFNNSK
Trigger: CTTTGAGTTGTTGAATGAAGTGAACTTCATTTGTCAGCGTTCGGTACGCAGTCTAGGCAGCGCCCTTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321130.14
ENST00000605201.1
CDS TCA 72 bp CACAGCCCGAACACTGGCCACTTTTTCGGACTGTGGTaGATTGTCCTTTCCATTGTTTTCCAGGAACACTCT +
Preference number: 6 (lower is better)
Translates to: HSPNTGHFFGLW*IVLSIVFQEHS
Trigger: AGAGTGTTCCTGGAAAACAATGGAAAGGACAATTCACCACAGTCCGAAAAAGTGGCCAGTGTTCGGGCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534898.9
ENST00000604948.5
CDS CCA 72 bp TGTGGAGACATTGTTTTAAGAGAAAACAACCTCTGCTaGTTCCTGATGCCACAGCGGTCTGCCAGAAACAGC +
Preference number: 6 (lower is better)
Translates to: CGDIVLRENNLC*FLMPQRSARNS
Trigger: GCTGTTTCTGGCAGACCGCTGTGGCATCAGGAACCAGCAGAGGTTGTTTTCTCTTAAAACAATGTCTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS GCA 72 bp TTCTGTGGAGACATTGTTTTAAGAGAAAACAACCTCTaGTGGTTCCTGATGCCACAGCGGTCTGCCAGAAAC +
Preference number: 6 (lower is better)
Translates to: FCGDIVLRENNL*WFLMPQRSARN
Trigger: GTTTCTGGCAGACCGCTGTGGCATCAGGAACCAGCAGAGGTTGTTTTCTCTTAAAACAATGTCTCCACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS TCA 72 bp AGCCACATCTATAGAGCTATGACAGCCAGCCATCTGTaGAATGATCCAACTTTCGAAACTGGTCTTTCCGGT +
Preference number: 6 (lower is better)
Translates to: SHIYRAMTASHL*NDPTFETGLSG
Trigger: ACCGGAAAGACCAGTTTCGAAAGTTGGATCATTTCACAGATGGCTGGCTGTCATAGCTCTATAGATGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS TCA 72 bp CATGCCAGCAGAGATTTAGCCACATCTATAGAGCTATaGCAGCCAGCCATCTGTGAAATGATCCAACTTTCG +
Preference number: 6 (lower is better)
Translates to: HASRDLATSIEL*QPAICEMIQLS
Trigger: CGAAAGTTGGATCATTTCACAGATGGCTGGCTGTCATAGCTCTATAGATGTGGCTAAATCTCTGCTGGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS GCA 72 bp AGGTTGTGTTGGGAGTTGAATAGTGTTCCTCACAGGTaGCAAGGCATGATCTTCAGTTTGAGAATTCATCTG +
Preference number: 6 (lower is better)
Translates to: RLCWELNSVPHR*QGMIFSLRIHL
Trigger: CAGATGAATTCTCAAACTGAAGATCATGCCTTGGCACCTGTGAGGAACACTATTCAACTCCCAACACAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
CDS CCA 72 bp TTCACAGGAACATCTTTCTACCAAGTCTTCATCATATaGTATGTGCCACGAGTCTCCAGTTGTTTGCACCAC +
Preference number: 6 (lower is better)
Translates to: FTGTSFYQVFII*YVPRVSSCLHH
Trigger: GTGGTGCAAACAACTGGAGACTCGTGGCACATACCATATGATGAAGACTTGGTAGAAAGATGTTCCTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS CAA 72 bp TTATTACTGCCCTCATCTTTCCTGAGATATCTGGCCTaGGCAATCAGATTCGTTGCTTTGGTATTCTGTGGA +
Preference number: 6 (lower is better)
Translates to: LLLPSSFLRYLA*AIRFVALVFCG
Trigger: TCCACAGAATACCAAAGCAACGAATCTGATTGCCAAGGCCAGATATCTCAGGAAAGATGAGGGCAGTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS TCA 72 bp TCTTACATTCCAGTTCATGAACCGAACGCTGACAAATaGAGTTCACTTCATTCAACAACTCAAAGCGGCACT +
Preference number: 6 (lower is better)
Translates to: SYIPVHEPNADK*SSLHSTTQSGT
Trigger: AGTGCCGCTTTGAGTTGTTGAATGAAGTGAACTTCATTTGTCAGCGTTCGGTTCATGAACTGGAATGTAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250377.11
ENST00000534898.9
CDS TCA 72 bp TTTCCCTTAAGACATTCATATTCTTCTGGACTCAGCTaGATAGACTCTATGGTTTTTCCACAGCCCGAACAC +
Preference number: 6 (lower is better)
Translates to: FPLRHSYSSGLS*IDSMVFPQPEH
Trigger: GTGTTCGGGCTGTGGAAAAACCATAGAGTCTATTCAGCTGAGTCCAGAAGAATATGAATGTCTTAAGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000557404.3
ENST00000603544.5
ENST00000603588.1
ENST00000604948.5
ENST00000605870.5
CDS CAA 90 bp GAGGTAAGAATCTCTATGTCTTTTGGTGGAGGCAAAGCCATTTGGTaGGTACTTCACAGGAACATCTTTCTACCAAGTCTTCATCATATG +
Preference number: 6 (lower is better)
Translates to: EVRISMSFGGGKAIW*VLHRNIFLPSLHHM
Trigger: CATATGATGAAGACTTGGTAGAAAGATGTTCCTGTGAAGTACCAACCAAATGGCTTTGCCTCCACCAAAAGACATAGAGATTCTTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS CAA 90 bp CATAGAGGTAAGAATCTCTATGTCTTTTGGTGGAGGCAAAGCCATTaGGTTGGTACTTCACAGGAACATCTTTCTACCAAGTCTTCATCA +
Preference number: 6 (lower is better)
Translates to: HRGKNLYVFWWRQSH*VGTSQEHLSTKSSS
Trigger: TGATGAAGACTTGGTAGAAAGATGTTCCTGTGAAGTACCAACCAAATGGCTTTGCCTCCACCAAAAGACATAGAGATTCTTACCTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250377.11
ENST00000321130.14
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5
ENST00000605870.5
CDS GCA 72 bp TTTCCTGAGATATCTGGCCTTGGCAATCAGATTCGTTaGTTTGGTATTCTGTGGAGACATTGTTTTAAGAGA +
Preference number: 6 (lower is better)
Translates to: FPEISGLGNQIR*FGILWRHCFKR
Trigger: TCTCTTAAAACAATGTCTCCACAGAATACCAAAGCAACGAATCTGATTGCCAAGGCCAGATATCTCAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
CDS GCA 72 bp GTAACTTACAATACCATTATTTTTGGCTGCTACCCATaGCAGCAGAGATTTAGCCACATCTATAGAGCTATG +
Preference number: 6 (lower is better)
Translates to: VTYNTIIFGCYP*QQRFSHIYRAM
Trigger: CATAGCTCTATAGATGTGGCTAAATCTCTGCTGGCATGGGTAGCAGCCAAAAATAATGGTATTGTAAGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250377.11
ENST00000534898.9
ENST00000603544.5
ENST00000604948.5