RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PROM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000007062

Ensembl transcript IDs: ENST00000447510.7, ENST00000502501.1, ENST00000502943.1, ENST00000503884.5, ENST00000504842.5, ENST00000505450.5, ENST00000508167.5, ENST00000508322.1, ENST00000508940.1, ENST00000510224.5, ENST00000511153.5, ENST00000511270.1, ENST00000512304.2, ENST00000513108.1, ENST00000513448.5, ENST00000513946.2, ENST00000514693.5, ENST00000514967.5, ENST00000539194.6, ENST00000540805.6, ENST00000675377.1, ENST00000675613.1

Found 1164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAAGACGCCTCCGGTGTTGGAGACACAGCCTCGGGTGGTCGGGGTaGCATGCCTGTCATAGCCGCACACGCCACACAGTAAGCCCAGGT +
Preference number: 1 (lower is better)
Translates to: GRRLRCWRHSLGWSG*HACHSRTRHTVSPG
Trigger: ACCTGGGCTTACTGTGTGGCGTGTGCGGCTATGACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CCA 90 bp TCCAAGAAGTGGTGCCAAACCCAGAGACCAATGGTGCCGTTGCCTTaGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGG +
Preference number: 1 (lower is better)
Translates to: SKKWCQTQRPMVPLP*CPPESLRCHWRCSW
Trigger: CCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTTTGGCACCACTTCTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR TCA 90 bp GTGCCAAACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGT +
Preference number: 1 (lower is better)
Translates to: VPNPETNGAVALVPA*VTTLPLALLLDLES
Trigger: ACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTTTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR GCA 90 bp AAGAAGTGGTGCCAAACCCAGAGACCAATGGTGCCGTTGCCTTGGTaGCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATT +
Preference number: 1 (lower is better)
Translates to: KKWCQTQRPMVPLPW*PPESLRCHWRCSWI
Trigger: AATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTTTGGCACCACTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR TCA 90 bp AAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGT +
Preference number: 1 (lower is better)
Translates to: KHYPETNGAVALVPA*VTTLPLALLLDLES
Trigger: ACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR GCA 90 bp AGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTaGCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCA +
Preference number: 1 (lower is better)
Translates to: RPMVPLPWCPPESLR*HWRCSWIWKVLVDP
Trigger: TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR CCA 90 bp ATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTaGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACT +
Preference number: 1 (lower is better)
Translates to: MVPLPWCPPESLRCH*RCSWIWKVLVDPET
Trigger: AGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR GCA 90 bp CCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTaGTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAA +
Preference number: 1 (lower is better)
Translates to: PLPWCPPESLRCHWR*SWIWKVLVDPETTK
Trigger: TTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR TCA 90 bp ACTTGCTTGCAACTCTGGCACAGCCTTCCTTCCACCTGGATATCCTaGGTCCTGAGAAGACCTAGTAGGGCTGGAACTAAAGCCAGGCTG +
Preference number: 1 (lower is better)
Translates to: TCLQLWHSLPSTWIS*VLRRPSRAGTKARL
Trigger: CAGCCTGGCTTTAGTTCCAGCCCTACTAGGTCTTCTCAGGACTCAGGATATCCAGGTGGAAGGAAGGCTGTGCCAGAGTTGCAAGCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR GCA 90 bp ATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTaGCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCT +
Preference number: 1 (lower is better)
Translates to: IVFILKALPRDQWCR*LGARLSHYVATGVA
Trigger: AGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR GCA 90 bp AACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGC +
Preference number: 1 (lower is better)
Translates to: NVIVFILKALPRDQW*RCLGARLSHYVATG
Trigger: GCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR TCA 90 bp CTTCATGATGATTTCTTCACAGTTTGGCTTACTTCCTTCACACCATaGGGAAGACGCCTCCGGTGTTGGAGACACAGCCTCGGGTGGTCG +
Preference number: 1 (lower is better)
Translates to: LHDDFFTVWLTSFTP*GRRLRCWRHSLGWS
Trigger: CGACCACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTTCCTCATGGTGTGAAGGAAGTAAGCCAAACTGTGAAGAAATCATCATGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR CCA 90 bp CCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTaGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTG +
Preference number: 1 (lower is better)
Translates to: PWCPPESLRCHWRCS*IWKVLVDPETTKNL
Trigger: CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR TCA 90 bp GCTGCCTCAGTTCAGGGTTGCTATTCAGCTGGCTTAGAGACAATCTaGTGCTGTTGCAGGTTTCACTTGATGGATGCACCAAGCACAGAG +
Preference number: 1 (lower is better)
Translates to: AASVQGCYSAGLETI*CCCRFHLMDAPSTE
Trigger: CTCTGTGCTTGGTGCATCCATCAAGTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CCA 90 bp TATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATaGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACT +
Preference number: 1 (lower is better)
Translates to: YNVIVFILKALPRDQ*CRCLGARLSHYVAT
Trigger: AGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR GCA 90 bp TGGCTTAGAGACAATCTGATGCTGTTGCAGGTTTCACTTGATGGATaGACCAAGCACAGAGGGTCATTGAGAGATGACCGCAGGCTAGTT +
Preference number: 1 (lower is better)
Translates to: WLRDNLMLLQVSLDG*TKHRGSLRDDRRLV
Trigger: AACTAGCCTGCGGTCATCTCTCAATGACCCTCTGTGCTTGGTGCATCCATCAAGTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CCA 90 bp CTAGTTTTCACGCTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTaGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCCAACGCCTCT +
Preference number: 1 (lower is better)
Translates to: LVFTLVRLLLSCVLC*CKLFKVLFMFSNAS
Trigger: AGAGGCGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAGCGTGAAAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR TCA 90 bp GGGAGGGAGTCATCCTTGAATAGTGATGGACCATGGACTATAACGTaGTTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCC +
Preference number: 1 (lower is better)
Translates to: GRESSLNSDGPWTIT*LCSFLKHYPETNGA
Trigger: GGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCATGGTCCATCACTATTCAAGGATGACTCCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR GCA 90 bp TGGAGTTTCATTCAAGAGAGTTCGCAAGTCCTTGAAATTGCTATCTaGCAGTTTCCGACTCCTTTTGATCCGGGTTCTTACCTGGTGATT +
Preference number: 1 (lower is better)
Translates to: WSFIQESSQVLEIAI*QFPTPFDPGSYLVI
Trigger: AATCACCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTCTTGAATGAAACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR TCA 90 bp GCTAGAATCCTAGTTACTCTCTCCAACAATCCATTCCCTGTGCGTTaGAGTATCTTGACGCTTTGGTATAGAGTGCTCAGTGATTGTTCT +
Preference number: 1 (lower is better)
Translates to: ARILVTLSNNPFPVR*SILTLWYRVLSDCS
Trigger: AGAACAATCACTGAGCACTCTATACCAAAGCGTCAAGATACTTCAACGCACAGGGAATGGATTGTTGGAGAGAGTAACTAGGATTCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR GCA 90 bp GAAGATGCCAATGCTTATTATTATACAAATCACCAACAGGGAGATTaGAAAGCATTTCCTCAGGAAGGGCCCATTTTCCTTCTGTCGCTG +
Preference number: 1 (lower is better)
Translates to: EDANAYYYTNHQQGD*KAFPQEGPIFLLSL
Trigger: CAGCGACAGAAGGAAAATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTTGTATAATAATAAGCATTGGCATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR TCA 90 bp GAGTATATCCTGAATAGGAAGACGCTGAGTTACATTGTCGATATCTaGACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACAGT +
Preference number: 1 (lower is better)
Translates to: EYILNRKTLSYIVDI*TNGIQDPFDTCYDS
Trigger: ACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGATATCGACAATGTAACTCAGCGTCTTCCTATTCAGGATATACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR GCA 90 bp CTCTGTGGTAACAAAAGGTATATACACCGTTTACTGTACACAAAATaGATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACACA +
Preference number: 1 (lower is better)
Translates to: LCGNKRYIHRLLYTK*IFPVNWCVFSTLHT
Trigger: TGTGTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTGTTACCACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR GCA 90 bp GTGCTTTCATGCAAATTTAGGGACCAAACTCAAAGGTTTCATCCATaGTGGACACCAGATCTAAGAATTGTGACAGGATCTTCTCATATT +
Preference number: 1 (lower is better)
Translates to: VLSCKFRDQTQRFHP*WTPDLRIVTGSSHI
Trigger: AATATGAGAAGATCCTGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
3UTR CCA 90 bp GCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATaGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTC +
Preference number: 1 (lower is better)
Translates to: AFLSQDLSLSFEFVR*SYAGFSMIAFACHF
Trigger: GAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR CCA 90 bp CTTTCATGCAAATTTAGGGACCAAACTCAAAGGTTTCATCCATGCTaGACACCAGATCTAAGAATTGTGACAGGATCTTCTCATATTTCA +
Preference number: 1 (lower is better)
Translates to: LSCKFRDQTQRFHPC*TPDLRIVTGSSHIS
Trigger: TGAAATATGAGAAGATCCTGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
3UTR GCA 90 bp TTTGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATaGCATTTCCAAGTGGAACATGGCCAATCTTTGATAAAGTATAAT +
Preference number: 1 (lower is better)
Translates to: FVRWSYAGFSMIAFA*HFQVEHGQSLIKYN
Trigger: ATTATACTTTATCAAAGATTGGCCATGTTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR TCA 90 bp TCTGTGGATGTAACTTTCAGTGTTATTAACATAAACAGAGAATGCTaGGAGTATATCCTGAATAGGAAGACGCTGAGTTACATTGTCGAT +
Preference number: 1 (lower is better)
Translates to: SVDVTFSVININREC*EYILNRKTLSYIVD
Trigger: ATCGACAATGTAACTCAGCGTCTTCCTATTCAGGATATACTCTCAGCATTCTCTGTTTATGTTAATAACACTGAAAGTTACATCCACAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR TCA 90 bp CATTTCCAAGTGGAACATGGCCAATCTTTGATAAAGTATAATAGATaGAAATCTCTGCGTGAAGAATATGCTGTAGGTTTCACACACTTT +
Preference number: 1 (lower is better)
Translates to: HFQVEHGQSLIKYNR*KSLREEYAVGFTHF
Trigger: AAAGTGTGTGAAACCTACAGCATATTCTTCACGCAGAGATTTTCATCTATTATACTTTATCAAAGATTGGCCATGTTCCACTTGGAAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGCTCGGGTGGTCGGGGTaGCATGCCTGTCATAGCCGC +
Preference number: 2 (lower is better)
Translates to: GARLSHYVATGVAPGFGKLGWSG*HACHSR
Trigger: GCGGCTATGACAGGCATGCCACCCCGACCACCCGAG...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR GCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGCCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGC +
Preference number: 2 (lower is better)
Translates to: GARLSHYVATGVAPGFGKPRDQW*RCLGAR
Trigger: GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGG...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR CCA 90 bp GGTGTTGGAGACACAGCCTCGGGTGGTCGGGGTGGCATGCCTGTCATAGCCGCATTCTGCATCCACGGGTaGAAGCTGCCTCAGTTCAGG +
Preference number: 2 (lower is better)
Translates to: GVGDTASGGRGGMPVIAAFCIHG*KLPQFR
Trigger: CCTGAACTGAGGCAGCTTCCACCCGTGGATGCAGAA...TGCGGCTATGACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCTCCAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR TCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTG +
Preference number: 2 (lower is better)
Translates to: ILKALPRDQWCRCLGARLALVPA*VTTLPL
Trigger: CAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGC...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR TCA 90 bp GGTGTTGGAGACACAGCCTCGGGTGGTCGGGGTGGCATGCCTGTCATAGCCGCAAGGGTCATTGAGAGATaGCCGCAGGCTAGTTTTCAC +
Preference number: 2 (lower is better)
Translates to: GVGDTASGGRGGMPVIAARVIER*PQASFH
Trigger: GTGAAAACTAGCCTGCGGTCATCTCTCAATGACCCT...TGCGGCTATGACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCTCCAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCCCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGC +
Preference number: 2 (lower is better)
Translates to: SFLKHYPETNGAVALVPAPRDQW*RCLGAR
Trigger: GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGG...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR CCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGATGGTGCCGTTGCCTTaGTGCCCGCCTGAGTCACTA +
Preference number: 2 (lower is better)
Translates to: GARLSHYVATGVAPGFGKMVPLP*CPPESL
Trigger: TAGTGACTCAGGCGGGCACCAAGGCAACGGCACCAT...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR GCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCGTGCCGTTGCCTTGGTaGCCGCCTGAGTCACTACGT +
Preference number: 2 (lower is better)
Translates to: SFLKHYPETNGAVALVPAVPLPW*PPESLR
Trigger: ACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR GCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGCCTGAGTCACTACGTTaGCACTGGCGTTGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: ILKALPRDQWCRCLGARLPESLR*HWRCSW
Trigger: CCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGG...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR GCA 90 bp CAGCAGGAGGCAGGGGACGAACTTCATGGCGATACTCCGATAAACTTGCTTGCAGTGCCGTTGCCTTGGTaGCCGCCTGAGTCACTACGT +
Preference number: 2 (lower is better)
Translates to: QQEAGDELHGDTPINLLAVPLPW*PPESLR
Trigger: ACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC...TGCAAGCAAGTTTATCGGAGTATCGCCATGAAGTTCGTCCCCTGCCTCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR-3UTR CCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCACTACGTTGCCACTaGCGTTGCTCCTGGATTTGG +
Preference number: 2 (lower is better)
Translates to: GARLSHYVATGVAPGFGKSLRCH*RCSWIW
Trigger: CCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR CCA 90 bp GGTCACCAGCAGGAGGCAGGGGACGAACTTCATGGCGATACTCCGATAAACTTGATGGTGCCGTTGCCTTaGTGCCCGCCTGAGTCACTA +
Preference number: 2 (lower is better)
Translates to: GHQQEAGDELHGDTPINLMVPLP*CPPESL
Trigger: TAGTGACTCAGGCGGGCACCAAGGCAACGGCACCAT...CAAGTTTATCGGAGTATCGCCATGAAGTTCGTCCCCTGCCTCCTGCTGGTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR-3UTR CCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCATGGTGCCGTTGCCTTaGTGCCCGCCTGAGTCACTA +
Preference number: 2 (lower is better)
Translates to: SFLKHYPETNGAVALVPAMVPLP*CPPESL
Trigger: TAGTGACTCAGGCGGGCACCAAGGCAACGGCACCAT...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR TCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGGGAGGGAGTCATCCTTaGATAGTGATGGACCATGGA +
Preference number: 2 (lower is better)
Translates to: GARLSHYVATGVAPGFGKGGSHP*IVMDHG
Trigger: TCCATGGTCCATCACTATTCAAGGATGACTCCCTCC...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR GCA 90 bp AAGGTGCTGTTCATGTTCTCCAACGCCTCTTTGGTCTCCTTGATCGCTGTTGCCGTGCCGTTGCCTTGGTaGCCGCCTGAGTCACTACGT +
Preference number: 2 (lower is better)
Translates to: KVLFMFSNASLVSLIAVAVPLPW*PPESLR
Trigger: ACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC...GGCAACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR CCA 90 bp CCAAGAAGTGGTGCCAAACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCGTTGCTCCTGGATTTaGAAAGTCCTTGTAGACCCA +
Preference number: 2 (lower is better)
Translates to: PRSGAKPRDQWCRCLGARRCSWI*KVLVDP
Trigger: TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTTTGGCACCACTTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR-3UTR TCA 90 bp AATCCAACTCCAACCATGAGGAAGACGCCTCCGGTGTTGGAGACACAGCCTCGGGGAGGGAGTCATCCTTaGATAGTGATGGACCATGGA +
Preference number: 2 (lower is better)
Translates to: NPTPTMRKTPPVLETQPRGGSHP*IVMDHG
Trigger: TCCATGGTCCATCACTATTCAAGGATGACTCCCTCC...CCGAGGCTGTGTCTCCAACACCGGAGGCGTCTTCCTCATGGTTGGAGTTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR GCA 90 bp GGTCACCAGCAGGAGGCAGGGGACGAACTTCATGGCGATACTCCGATAAACTTGCGTTGCCACTGGCGTTaGTCCTGGATTTGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: GHQQEAGDELHGDTPINLRCHWR*SWIWKV
Trigger: GACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACG...CAAGTTTATCGGAGTATCGCCATGAAGTTCGTCCCCTGCCTCCTGCTGGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR-3UTR CCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACCACTGGCGTTGCTCCTaGATTTGGAAAGTCCTTGTA +
Preference number: 2 (lower is better)
Translates to: KALPRDQWCRCLGARLSHHWRCS*IWKVLV
Trigger: TACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTG...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR TCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGGGAGGGAGTCATCCTTaGATAGTGATGGACCATGGA +
Preference number: 2 (lower is better)
Translates to: ILKALPRDQWCRCLGARLGGSHP*IVMDHG
Trigger: TCCATGGTCCATCACTATTCAAGGATGACTCCCTCC...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR GCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAACCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGC +
Preference number: 2 (lower is better)
Translates to: LALLLDLESPCRPRNYQKPRDQW*RCLGAR
Trigger: GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGG...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR CCA 90 bp CAGCAGGAGGCAGGGGACGAACTTCATGGCGATACTCCGATAAACTTGCTTGCATCACTACGTTGCCACTaGCGTTGCTCCTGGATTTGG +
Preference number: 2 (lower is better)
Translates to: QQEAGDELHGDTPINLLASLRCH*RCSWIW
Trigger: CCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA...TGCAAGCAAGTTTATCGGAGTATCGCCATGAAGTTCGTCCCCTGCCTCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR-3UTR CCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGGCACATGAAAAGACCTaGGGGGAATGCCTACATCTG +
Preference number: 2 (lower is better)
Translates to: ILKALPRDQWCRCLGARLAHEKT*GECLHL
Trigger: CAGATGTAGGCATTCCCCCCAGGTCTTTTCATGTGC...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
3UTR CAA 90 bp CTGTTGCAGGTTTCACTTGATGGATGCACCAAGCACAGAGGGTCATaGAGAGATGACCGCAGGCTAGTTTTCACGCTGGTCAGACTGCTG +
Preference number: 2 (lower is better)
Translates to: LLQVSLDGCTKHRGS*RDDRRLVFTLVRLL
Trigger: CAGCAGTCTGACCAGCGTGAAAACTAGCCTGCGGTCATCTCTCAATGACCCTCTGTGCTTGGTGCATCCATCAAGTGAAACCTGCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp TTATACAAATCACCAACAGGGAGATTGCAAAGCATTTCCTCAGGAAGGGCCCATCCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGC +
Preference number: 2 (lower is better)
Translates to: LYKSPTGRLQSISSGRAHPRDQW*RCLGAR
Trigger: GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGG...ATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTTGTATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR GCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGCAAAGGTTTCATCCATaGTGGACACCAGATCTAAGA +
Preference number: 2 (lower is better)
Translates to: GARLSHYVATGVAPGFGKQRFHP*WTPDLR
Trigger: TCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTG...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR TCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTG +
Preference number: 2 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIALVPA*VTTLPL
Trigger: CAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGC...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR TCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAATTCAAGACCCTTTTaGTACCTGCTACGACAGTCG +
Preference number: 2 (lower is better)
Translates to: ILKALPRDQWCRCLGARLNSRPF*YLLRQS
Trigger: CGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATT...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR GCA 90 bp CCACCCAGCCACCAGTATGAATCATACTCTTCCAATGTAGGTAAATTTCTGTGGGACCAATGGTGCCGTTaGCTTGGTGCCCGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: PPSHQYESYSSNVGKFLWDQWCR*LGARLS
Trigger: ACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC...CCACAGAAATTTACCTACATTGGAAGAGTATGATTCATACTGGTGGCTGGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR GCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTCCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGC +
Preference number: 2 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIPRDQW*RCLGAR
Trigger: GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGG...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCGGGTTGCTATTCAGCTaGCTTAGAGACAATCTGATG +
Preference number: 2 (lower is better)
Translates to: SFLKHYPETNGAVALVPAGLLFS*LRDNLM
Trigger: CATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCC...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR CAA 90 bp GCTAGTTTTCACGCTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTaGGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCCAACGCCTC +
Preference number: 2 (lower is better)
Translates to: ASFHAGQTAAKLCTL*VQALQGAVHVLQRL
Trigger: GAGGCGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAGCGTGAAAACTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CAA 90 bp CAGGCTAGTTTTCACGCTGGTCAGACTGCTGCTAAGCTGTGTACTTaGTTGGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCCAACGC +
Preference number: 2 (lower is better)
Translates to: QASFHAGQTAAKLCT*LVQALQGAVHVLQR
Trigger: GCGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAGCGTGAAAACTAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CAA 90 bp TGTTGGACCAGGCCATCCAAATCTGTCCTAAGAACGTTATTAACGTaGTCAAGTTCTGCATCCACGGGTGGAAGCTGCCTCAGTTCAGGG +
Preference number: 2 (lower is better)
Translates to: CWTRPSKSVLRTLLT*SSSASTGGSCLSSG
Trigger: CCCTGAACTGAGGCAGCTTCCACCCGTGGATGCAGAACTTGACAACGTTAATAACGTTCTTAGGACAGATTTGGATGGCCTGGTCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CAA 90 bp CACAGAAAGACATCAACAGCAGTATCTAGAGCGGTGGCCACAGGTTaGCACGATGCCACTTTCTCACTGATAGAGAACTCGATCCACTGC +
Preference number: 2 (lower is better)
Translates to: HRKTSTAVSRAVATG*HDATFSLIENSIHC
Trigger: GCAGTGGATCGAGTTCTCTATCAGTGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCGCTCTAGATACTGCTGTTGATGTCTTTCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR TCA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTG +
Preference number: 2 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQALVPA*VTTLPL
Trigger: CAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGC...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR TCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGCCAGTTCTTCATTGCTaGTCACTTTTGATAATGACA +
Preference number: 2 (lower is better)
Translates to: GARLSHYVATGVAPGFGKPVLHC*SLLIMT
Trigger: TGTCATTATCAAAAGTGATCAGCAATGAAGAACTGG...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTGACCAATGGTGCCGTTaGCTTGGTGCCCGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIDQWCR*LGARLS
Trigger: ACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGCAAAGGTTTCATCCATaGTGGACACCAGATCTAAGA +
Preference number: 2 (lower is better)
Translates to: ILKALPRDQWCRCLGARLQRFHP*WTPDLR
Trigger: TCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTG...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CCA 90 bp AAGAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCCAGTTTCCGACTCCTTTTGATGGTGCCGTTGCCTTaGTGCCCGCCTGAGTCACTA +
Preference number: 2 (lower is better)
Translates to: KRVRKSLKLLSASFRLLLMVPLP*CPPESL
Trigger: TAGTGACTCAGGCGGGCACCAAGGCAACGGCACCAT...CAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR CCA 90 bp AAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCCAACTACCCAGAGACCAATaGTGCCGTTGCCTTGGTGCC +
Preference number: 2 (lower is better)
Translates to: KLCTLLVQALQGAVHVLQLPRDQ*CRCLGA
Trigger: GGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAG...TTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR CCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCATCTTTCCTGTAAACTaGTGTGTGTTCAGCACACTC +
Preference number: 2 (lower is better)
Translates to: SFLKHYPETNGAVALVPAIFPVN*CVFSTL
Trigger: GAGTGTGCTGAACACACACCAGTTTACAGGAAAGAT...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR TCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTG +
Preference number: 2 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIALVPA*VTTLPL
Trigger: CAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGC...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR TCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAGGATATCCTGAGTCCTaGGAAGACCTAGTAGGGCTG +
Preference number: 2 (lower is better)
Translates to: LALLLDLESPCRPRNYQKGYPES*EDLVGL
Trigger: CAGCCCTACTAGGTCTTCTCAGGACTCAGGATATCC...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR-3UTR TCA 90 bp CTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGGGCTTAGAGACAATCTaGTGCTGTTGCAGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: LVRLLLSCVLCWCKLFKVGLETI*CCCRFH
Trigger: GTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCC...CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp GCTCTTCAAGGTGCTGTTCATGTTCTCCAACGCCTCTTTGGTCTCCTTGATCGCCACCAACAGGGAGATTaGAAAGCATTTCCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: ALQGAVHVLQRLFGLLDRHQQGD*KAFPQE
Trigger: TTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTG...GCGATCAAGGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTTGAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp TGGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCCAACGCCTCTTTGGTCTCCCACCAACAGGGAGATTaGAAAGCATTTCCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: WCKLFKVLFMFSNASLVSHQQGD*KAFPQE
Trigger: TTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTG...GGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp ACCCTTTTGATACCTGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTGCAAGCTCTTCAAGGTaGTGTTCATGTTCTCCAACG +
Preference number: 2 (lower is better)
Translates to: TLLIPATTVVVWRCTLSGASSSR*CSCSPT
Trigger: CGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGC...ACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATCAAAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCGACTTTCCAATTCACTaGTTATGCTTCCAGTATGCT +
Preference number: 2 (lower is better)
Translates to: SFLKHYPETNGAVALVPADFPIH*LCFQYA
Trigger: AGCATACTGGAAGCATAAGCAGTGAATTGGAAAGTC...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR CCA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCACTACCCAGAGACCAATaGTGCCGTTGCCTTGGTGCC +
Preference number: 2 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPLPRDQ*CRCLGA
Trigger: GGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAG...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CCA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACACTACCCAGAGACCAATaGTGCCGTTGCCTTGGTGCC +
Preference number: 2 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTLPRDQ*CRCLGA
Trigger: GGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAG...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
3UTR-3UTR CCA 90 bp AATCCAACTCCAACCATGAGGAAGACGCCTCCGGTGTTGGAGACACAGCCTCGGTTTGAATTTGTCAGATaGAGTTACGCAGGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: NPTPTMRKTPPVLETQPRFEFVR*SYAGFS
Trigger: AGAGAAACCTGCGTAACTCCATCTGACAAATTCAAA...CCGAGGCTGTGTCTCCAACACCGGAGGCGTCTTCCTCATGGTTGGAGTTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR CCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAACAGTATCTAGAGCGGTaGCCACAGGTTTGCACGATG +
Preference number: 2 (lower is better)
Translates to: LALLLDLESPCRPRNYQKQYLER*PQVCTM
Trigger: CATCGTGCAAACCTGTGGCCACCGCTCTAGATACTG...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR CAA 90 bp ATCGCTGTTGCCATGGACTTAATCTCATCAAGAACAGGGATGATGTaGGGTCTCAGTCGGTCAAGAATTCCGCCTCCTAGCACTGAATTG +
Preference number: 2 (lower is better)
Translates to: IAVAMDLISSRTGMM*GLSRSRIPPPSTEL
Trigger: CAATTCAGTGCTAGGAGGCGGAATTCTTGACCGACTGAGACCCAACATCATCCCTGTTCTTGATGAGATTAAGTCCATGGCAACAGCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CAA 90 bp AGTTCAGGGTTGCTATTCAGCTGGCTTAGAGACAATCTGATGCTGTaGCAGGTTTCACTTGATGGATGCACCAAGCACAGAGGGTCATTG +
Preference number: 2 (lower is better)
Translates to: SSGLLFSWLRDNLML*QVSLDGCTKHRGSL
Trigger: CAATGACCCTCTGTGCTTGGTGCATCCATCAAGTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCCTGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR TCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGCCATGGACTATAACGTaGTTGTGTTCATTCTTAAAG +
Preference number: 2 (lower is better)
Translates to: ILKALPRDQWCRCLGARLPWTIT*LCSFLK
Trigger: CTTTAAGAATGAACACAATCACGTTATAGTCCATGG...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR TCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGATGAAAATCTCTGCGTaGAGAATATGCTGTAGGTTT +
Preference number: 2 (lower is better)
Translates to: ILKALPRDQWCRCLGARLMKISA*RICCRF
Trigger: AAACCTACAGCATATTCTTCACGCAGAGATTTTCAT...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR TCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTCTCTCTCTCTCTTTTaGATTTGTCAGATGGAGTTA +
Preference number: 2 (lower is better)
Translates to: SFLKHYPETNGAVALVPASLSLF*ICQMEL
Trigger: TAACTCCATCTGACAAATTCAAAAGAGAGAGAGAGA...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR TCA 90 bp TTGTACTCTGTCAGGTATATCATTAAGGGATTGATAGCCCTGTTGGACCAGGCCGTTTCCGACTCCTTTTaGTCCGGGTTCTTACCTGGT +
Preference number: 2 (lower is better)
Translates to: LYSVRYIIKGLIALLDQAVSDSF*SGFLPG
Trigger: ACCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAAC...GGCCTGGTCCAACAGGGCTATCAATCCCTTAATGATATACCTGACAGAGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR TCA 90 bp GATACCTGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTGGATCACTTGTGTGCTaGGATAACCTCCCAGGCAAA +
Preference number: 2 (lower is better)
Translates to: DTCYDSRGLALYSVRYIIGSLVC*DNLPGK
Trigger: TTTGCCTGGGAGGTTATCTCAGCACACAAGTGATCC...AATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR-3UTR GCA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGCCTGAGTCACTACGTTaGCACTGGCGTTGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: MDYNVIVFILKALPRDQWPESLR*HWRCSW
Trigger: CCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGG...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR GCA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTGTGCCGTTGCCTTGGTaGCCGCCTGAGTCACTACGT +
Preference number: 2 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVVPLPW*PPESLR
Trigger: ACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCGACCAATGGTGCCGTTaGCTTGGTGCCCGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFDQWCR*LGARLS
Trigger: ACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAAGACCAATGGTGCCGTTaGCTTGGTGCCCGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: STFERTAFLSQDLSLSFEDQWCR*LGARLS
Trigger: ACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAGCTTCCAAGAAGTGGTaGCAAACCCAGAGACCAATG +
Preference number: 2 (lower is better)
Translates to: LALLLDLESPCRPRNYQKASKKW*QTQRPM
Trigger: CATTGGTCTCTGGGTTTGGCACCACTTCTTGGAAGC...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR-3UTR CCA 90 bp GAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCCAGTTTCCGACTCCTTTTGATTCACTACGTTGCCACTaGCGTTGCTCCTGGATTTGG +
Preference number: 2 (lower is better)
Translates to: ESSQVLEIAICQFPTPFDSLRCH*RCSWIW
Trigger: CCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA...ATCAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR CCA 90 bp ACCCTTTTGATACCTGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTAGCTGTGTACTTTGTTaGTGCAAGCTCTTCAAGGTG +
Preference number: 2 (lower is better)
Translates to: TLLIPATTVVVWRCTLSGSCVLC*CKLFKV
Trigger: CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCT...ACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATCAAAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CCA 90 bp CTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGGGGTTGCTATTCAGCTaGCTTAGAGACAATCTGATG +
Preference number: 2 (lower is better)
Translates to: LVRLLLSCVLCWCKLFKVGLLFS*LRDNLM
Trigger: CATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCC...CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAACTGCTACGACAGTCGTaGTTTGGCGTTGTACTCTGT +
Preference number: 2 (lower is better)
Translates to: LALLLDLESPCRPRNYQKLLRQS*FGVVLC
Trigger: ACAGAGTACAACGCCAAACCACGACTGTCGTAGCAG...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR TCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAGGCTTAGAGACAATCTaGTGCTGTTGCAGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: LALLLDLESPCRPRNYQKGLETI*CCCRFH
Trigger: GTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCC...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR GCA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAACGTTGCCACTGGCGTTaGTCCTGGATTTGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: WSYAGFSMIAFACHFQVERCHWR*SWIWKV
Trigger: GACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACG...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCACGTTGCCACTGGCGTTaGTCCTGGATTTGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPRCHWR*SWIWKV
Trigger: GACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACG...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp AATGTTGAGATGTTCACTGATATTGAAGCTGTTCTGCAGGTGAAGAGTGCCGTACGTTGCCACTGGCGTTaGTCCTGGATTTGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: NVEMFTDIEAVLQVKSAVRCHWR*SWIWKV
Trigger: GACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACG...TACGGCACTCTTCACCTGCAGAACAGCTTCAATATCAGTGAACATCTCAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR GCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCCCTGAGTCACTACGTTaGCACTGGCGTTGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIPESLR*HWRCSW
Trigger: CCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGG...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGCCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGC +
Preference number: 2 (lower is better)
Translates to: SCTPINVYRNATENSVKLPRDQW*RCLGAR
Trigger: GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGG...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp CCACCCAGCCACCAGTATGAATCATACTCTTCCAATGTAGGTAAATTTCTGTGGGCCTCAGTTCAGGGTTaGTATTCAGCTGGCTTAGAG +
Preference number: 2 (lower is better)
Translates to: PPSHQYESYSSNVGKFLWASVQG*YSAGLE
Trigger: CTCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGC...CCACAGAAATTTACCTACATTGGAAGAGTATGATTCATACTGGTGGCTGGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR TCA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAGGAGGGAGTCATCCTTaGATAGTGATGGACCATGGA +
Preference number: 2 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPGGSHP*IVMDHG
Trigger: TCCATGGTCCATCACTATTCAAGGATGACTCCCTCC...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR TCA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAAGTTTCCGACTCCTTTTaGTCCGGGTTCTTACCTGGT +
Preference number: 2 (lower is better)
Translates to: WSYAGFSMIAFACHFQVEVSDSF*SGFLPG
Trigger: ACCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAAC...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR TCA 90 bp GACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTAAGGGATTGATACATCAAGAACAGGGATaGTGTTGGGTCTCAGTCGGT +
Preference number: 2 (lower is better)
Translates to: DSRGLALYSVRYIIKGLIHQEQG*CWVSVG
Trigger: ACCGACTGAGACCCAACATCATCCCTGTTCTTGATG...TATCAATCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTCCTGAGTCACTACGTTaGCACTGGCGTTGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSPESLR*HWRCSW
Trigger: CCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGG...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTGTGCCGTTGCCTTGGTaGCCGCCTGAGTCACTACGT +
Preference number: 2 (lower is better)
Translates to: TLDTSLMILMLAALQLMFVPLPW*PPESLR
Trigger: ACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp CAAAAGGTATATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGCCGTTGCCTTGGTaGCCGCCTGAGTCACTACGT +
Preference number: 2 (lower is better)
Translates to: QKVYTPFTVHKMHLSCKLVPLPW*PPESLR
Trigger: ACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC...CAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGGTGCCGTTGCCTTGGTaGCCGCCTGAGTCACTACGT +
Preference number: 2 (lower is better)
Translates to: SCTPINVYRNATENSVKLVPLPW*PPESLR
Trigger: ACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp CTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGGACCAATGGTGCCGTTaGCTTGGTGCCCGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: LQLMFIVMQQKTLLNCTPDQWCR*LGARLS
Trigger: ACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC...CGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CCA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGATGGTGCCGTTGCCTTaGTGCCCGCCTGAGTCACTA +
Preference number: 2 (lower is better)
Translates to: RTLDTSLMILMLAALQLMMVPLP*CPPESL
Trigger: TAGTGACTCAGGCGGGCACCAAGGCAACGGCACCAT...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTCTACCCAGAGACCAATaGTGCCGTTGCCTTGGTGCC +
Preference number: 2 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSLPRDQ*CRCLGA
Trigger: GGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAG...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
3UTR-3UTR CCA 90 bp ATGATGATTTCTTCACAGTTTGGCTTACTTCCTTCACACCATGAGGAAGACGCCTTAGGCTGGTCATGGTaGCTTACGTCTACAGTTCCA +
Preference number: 2 (lower is better)
Translates to: MMISSQFGLLPSHHEEDALGWSW*LTSTVP
Trigger: TGGAACTGTAGACGTAAGCCACCATGACCAGCCTAA...GGCGTCTTCCTCATGGTGTGAAGGAAGTAAGCCAAACTGTGAAGAAATCATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR CAA 90 bp ATTTGCTCTGGAGTTTCATTCAAGAGAGTTCGCAAGTCCTTGAAATaGCTATCTGCCAGTTTCCGACTCCTTTTGATCCGGGTTCTTACC +
Preference number: 2 (lower is better)
Translates to: ICSGVSFKRVRKSLK*LSASFRLLLIRVLT
Trigger: GGTAAGAACCCGGATCAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTCTTGAATGAAACTCCAGAGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CAA 90 bp ATTCAAGACCCTTTTGATACCTGCTACGACAGTCGTGGTTTGGCGTaGTACTCTGTCAGGTATATCATTAAGGGATTGATAGCCCTGTTG +
Preference number: 2 (lower is better)
Translates to: IQDPFDTCYDSRGLA*YSVRYIIKGLIALL
Trigger: CAACAGGGCTATCAATCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR TCA 90 bp ATCTGTCCTAAGAACGTTATTAACGTTGTCAAGTTCTGCATCCACGGGTGGAAGGAGTTCGCAAGTCCTTaGAATTGCTATCTGCCAGTT +
Preference number: 2 (lower is better)
Translates to: ICPKNVINVVKFCIHGWKEFASP*NCYLPV
Trigger: AACTGGCAGATAGCAATTTCAAGGACTTGCGAACTC...CTTCCACCCGTGGATGCAGAACTTGACAACGTTAATAACGTTCTTAGGACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR TCA 90 bp ATGATGATTTCTTCACAGTTTGGCTTACTTCCTTCACACCATGAGGAAGACGCCAATTCAAGACCCTTTTaGTACCTGCTACGACAGTCG +
Preference number: 2 (lower is better)
Translates to: MMISSQFGLLPSHHEEDANSRPF*YLLRQS
Trigger: CGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATT...GGCGTCTTCCTCATGGTGTGAAGGAAGTAAGCCAAACTGTGAAGAAATCATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR-3UTR TCA 90 bp ACCCTTTTGATACCTGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTTACATTGTCGATATCTaGACCAATGGAATTCAAGAC +
Preference number: 2 (lower is better)
Translates to: TLLIPATTVVVWRCTLSGYIVDI*TNGIQD
Trigger: GTCTTGAATTCCATTGGTTCAGATATCGACAATGTA...ACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATCAAAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAACGTTGCCACTGGCGTTaGTCCTGGATTTGGAAAGTC +
Preference number: 2 (lower is better)
Translates to: STFERTAFLSQDLSLSFERCHWR*SWIWKV
Trigger: GACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACG...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGCCTGAGTCACTACGTTaGCACTGGCGTTGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: SCTPINVYRNATENSVKLPESLR*HWRCSW
Trigger: CCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGG...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp TGGACCAGGCCATCCAAATCTGTCCTAAGAACGTTATTAACGTTGTCAAGTTCTTCCTTCTGTCGCTGGTaGATTTCTCCACCACATTTG +
Preference number: 2 (lower is better)
Translates to: WTRPSKSVLRTLLTLSSSSFCRW*ISPPHL
Trigger: CAAATGTGGTGGAGAAATGCACCAGCGACAGAAGGA...AGAACTTGACAACGTTAATAACGTTCTTAGGACAGATTTGGATGGCCTGGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp CTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGTCTTACCTGGTGATTTaGCACAAAACCATAGAAGAT +
Preference number: 2 (lower is better)
Translates to: LVRLLLSCVLCWCKLFKVSYLVI*HKTIED
Trigger: ATCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGA...CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp TGGACCAGGCCATCCAAATCTGTCCTAAGAACGTTATTAACGTTGTCAAGTTCTGCAAGCTCTTCAAGGTaGTGTTCATGTTCTCCAACG +
Preference number: 2 (lower is better)
Translates to: WTRPSKSVLRTLLTLSSSASSSR*CSCSPT
Trigger: CGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGC...AGAACTTGACAACGTTAATAACGTTCTTAGGACAGATTTGGATGGCCTGGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CCA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCACGTTGCTCCTGGATTTaGAAAGTCCTTGTAGACCCA +
Preference number: 2 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPRCSWI*KVLVDP
Trigger: TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR TCA 90 bp TGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTAAGGGAAAACAACTCCACTTTTaGACGAACAGCATTTCTCTC +
Preference number: 2 (lower is better)
Translates to: CYDSRGLALYSVRYIIKGKQLHF*TNSISL
Trigger: GAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTT...TCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR TCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAAAACAACTCCACTTTTaGACGAACAGCATTTCTCTC +
Preference number: 2 (lower is better)
Translates to: LALLLDLESPCRPRNYQKKQLHF*TNSISL
Trigger: GAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTT...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
43% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR TCA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACAGAGTTCGCAAGTCCTTaGAATTGCTATCTGCCAGTT +
Preference number: 2 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTEFASP*NCYLPV
Trigger: AACTGGCAGATAGCAATTTCAAGGACTTGCGAACTC...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR TCA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAACATCAAGAACAGGGATaGTGTTGGGTCTCAGTCGGT +
Preference number: 2 (lower is better)
Translates to: STFERTAFLSQDLSLSFEHQEQG*CWVSVG
Trigger: ACCGACTGAGACCCAACATCATCCCTGTTCTTGATG...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR GCA 90 bp TTGTCGATATCTGAACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACAGTTTCACTTGATGGATaGACCAAGCACAGAGGGTCA +
Preference number: 2 (lower is better)
Translates to: LSISEPMEFKTLLIPATTVSLDG*TKHRGS
Trigger: TGACCCTCTGTGCTTGGTGCATCCATCAAGTGAAAC...TGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGATATCGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CCA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACGTTGCTCCTGGATTTaGAAAGTCCTTGTAGACCCA +
Preference number: 2 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTRCSWI*KVLVDP
Trigger: TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CCA 90 bp AAGAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCCAGTTTCCGACTCCTTTTGAAATTAGGCTGGTCATaGTGGCTTACGTCTACAGTT +
Preference number: 2 (lower is better)
Translates to: KRVRKSLKLLSASFRLLLKLGWS*WLTSTV
Trigger: AACTGTAGACGTAAGCCACCATGACCAGCCTAATTT...CAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR CAA 90 bp AGAAGATGCCAATGCTTATTATTATACAAATCACCAACAGGGAGATaGCAAAGCATTTCCTCAGGAAGGGCCCATTTTCCTTCTGTCGCT +
Preference number: 2 (lower is better)
Translates to: RRCQCLLLYKSPTGR*QSISSGRAHFPSVA
Trigger: AGCGACAGAAGGAAAATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTTGTATAATAATAAGCATTGGCATCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CAA 90 bp TATTTGATTTGCTCTGGAGTTTCATTCAAGAGAGTTCGCAAGTCCTaGAAATTGCTATCTGCCAGTTTCCGACTCCTTTTGATCCGGGTT +
Preference number: 2 (lower is better)
Translates to: YLICSGVSFKRVRKS*KLLSASFRLLLIRV
Trigger: AACCCGGATCAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTCTTGAATGAAACTCCAGAGCAAATCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CAA 90 bp CCTAGCACTGAATTGATACTGTTCAGATCTGTGAACGCCTTGTCCTaGGTAGTGTTGTACTGGGCCAATATATATTTGATTTGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: PSTELILFRSVNALS*VVLYWANIYLICSG
Trigger: TCCAGAGCAAATCAAATATATATTGGCCCAGTACAACACTACCAAGGACAAGGCGTTCACAGATCTGAACAGTATCAATTCAGTGCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR TCA 90 bp TTGTACTCTGTCAGGTATATCATTAAGGGATTGATAGCCCTGTTGGACCAGGCCATAAACAGAGAATGCTaGGAGTATATCCTGAATAGG +
Preference number: 2 (lower is better)
Translates to: LYSVRYIIKGLIALLDQAINREC*EYILNR
Trigger: CCTATTCAGGATATACTCTCAGCATTCTCTGTTTAT...GGCCTGGTCCAACAGGGCTATCAATCCCTTAATGATATACCTGACAGAGTACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp AAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCCAACTTGAAATTGCTATCTaGCAGTTTCCGACTCCTTTT +
Preference number: 2 (lower is better)
Translates to: KLCTLLVQALQGAVHVLQLEIAI*QFPTPF
Trigger: AAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAG...TTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CCA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCCGTTGCTCCTGGATTTaGAAAGTCCTTGTAGACCCA +
Preference number: 2 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFRCSWI*KVLVDP
Trigger: TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CCA 90 bp AATGTTGAGATGTTCACTGATATTGAAGCTGTTCTGCAGGTGAAGAGTGCCGTAATCTTTCCTGTAAACTaGTGTGTGTTCAGCACACTC +
Preference number: 2 (lower is better)
Translates to: NVEMFTDIEAVLQVKSAVIFPVN*CVFSTL
Trigger: GAGTGTGCTGAACACACACCAGTTTACAGGAAAGAT...TACGGCACTCTTCACCTGCAGAACAGCTTCAATATCAGTGAACATCTCAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR CCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAACTGTACACCGTAATTaGCATCTGTTAAAACAACTC +
Preference number: 2 (lower is better)
Translates to: LALLLDLESPCRPRNYQKTVHRN*HLLKQL
Trigger: GAGTTGTTTTAACAGATGCCAATTACGGTGTACAGT...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CCA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGACGACAGTCGTGGTTTaGCGTTGTACTCTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: RTLDTSLMILMLAALQLMTTVVV*RCTLSG
Trigger: ACCTGACAGAGTACAACGCCAAACCACGACTGTCGT...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR TCA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCGGAGGGAGTCATCCTTaGATAGTGATGGACCATGGA +
Preference number: 2 (lower is better)
Translates to: NVYRNATENSVKLYTVIGGGSHP*IVMDHG
Trigger: TCCATGGTCCATCACTATTCAAGGATGACTCCCTCC...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR TCA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCGTTGCAGGTTTCACTTaGTGGATGCACCAAGCACAG +
Preference number: 2 (lower is better)
Translates to: NVYRNATENSVKLYTVIGVAGFT*WMHQAQ
Trigger: CTGTGCTTGGTGCATCCATCAAGTGAAACCTGCAAC...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR CCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGGCACATGAAAAGACCTaGGGGGAATGCCTACATCTG +
Preference number: 2 (lower is better)
Translates to: SCTPINVYRNATENSVKLAHEKT*GECLHL
Trigger: CAGATGTAGGCATTCCCCCCAGGTCTTTTCATGTGC...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
3UTR-3UTR TCA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAAACGCAGGTTTCTCTATaGTTGCTTTTGCATGCCATT +
Preference number: 2 (lower is better)
Translates to: STFERTAFLSQDLSLSFETQVSL*LLLHAI
Trigger: AATGGCATGCAAAAGCAATCATAGAGAAACCTGCGT...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR TCA 90 bp GACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTAAGGGATTGATAGGGCCAATATATATTTaGTTTGCTCTGGAGTTTCAT +
Preference number: 2 (lower is better)
Translates to: DSRGLALYSVRYIIKGLIGPIYI*FALEFH
Trigger: ATGAAACTCCAGAGCAAATCAAATATATATTGGCCC...TATCAATCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp TCCCTGCTTCATAGTAGACAATCTTGTCATAATCAATTTTGGATTCATATGCCTTCCTTCTGTCGCTGGTaGATTTCTCCACCACATTTG +
Preference number: 2 (lower is better)
Translates to: SLLHSRQSCHNQFWIHMPSFCRW*ISPPHL
Trigger: CAAATGTGGTGGAGAAATGCACCAGCGACAGAAGGA...AGGCATATGAATCCAAAATTGATTATGACAAGATTGTCTACTATGAAGCAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR-3UTR GCA 90 bp TTGTCGATATCTGAACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACACTTGAAATTGCTATCTaGCAGTTTCCGACTCCTTTT +
Preference number: 2 (lower is better)
Translates to: LSISEPMEFKTLLIPATTLEIAI*QFPTPF
Trigger: AAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAG...TGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGATATCGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTAGCTGTGTACTTTGTTaGTGCAAGCTCTTCAAGGTG +
Preference number: 2 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSSCVLC*CKLFKV
Trigger: CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCT...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR TCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTACGCAGGTTTCTCTATaGTTGCTTTTGCATGCCATT +
Preference number: 2 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSTQVSL*LLLHAI
Trigger: AATGGCATGCAAAAGCAATCATAGAGAAACCTGCGT...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCCTCCTTGATCGCTGTTaGCATGGACTTAATCTCATC +
Preference number: 2 (lower is better)
Translates to: NVYRNATENSVKLYTVIGLLDRC*HGLNLI
Trigger: GATGAGATTAAGTCCATGGCAACAGCGATCAAGGAG...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR GCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGCACAGGTTTGCACGATaGCACTTTCTCACTGATAGA +
Preference number: 2 (lower is better)
Translates to: SCTPINVYRNATENSVKLHRFAR*HFLTDR
Trigger: TCTATCAGTGAGAAAGTGGCATCGTGCAAACCTGTG...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR CCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTATCTTTCCTGTAAACTaGTGTGTGTTCAGCACACTC +
Preference number: 2 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSIFPVN*CVFSTL
Trigger: GAGTGTGCTGAACACACACCAGTTTACAGGAAAGAT...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAAATGATTGCTTTTGCATaGCATTTCCAAGTGGAACAT +
Preference number: 2 (lower is better)
Translates to: STFERTAFLSQDLSLSFEMIAFA*HFQVEH
Trigger: ATGTTCCACTTGGAAATGGCATGCAAAAGCAATCAT...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTATGATTGCTTTTGCATaGCATTTCCAAGTGGAACAT +
Preference number: 2 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSMIAFA*HFQVEH
Trigger: ATGTTCCACTTGGAAATGGCATGCAAAAGCAATCAT...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
3UTR-3UTR CCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTTTCCAAGTGGAACATaGCCAATCTTTGATAAAGTA +
Preference number: 2 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIFPSGT*PIFDKV
Trigger: TACTTTATCAAAGATTGGCCATGTTCCACTTGGAAA...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CCA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTCCAAGTGGAACATaGCCAATCTTTGATAAAGTA +
Preference number: 2 (lower is better)
Translates to: STFERTAFLSQDLSLSFEFPSGT*PIFDKV
Trigger: TACTTTATCAAAGATTGGCCATGTTCCACTTGGAAA...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CCA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTGAATTTGTCAGATaGAGTTACGCAGGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: RTLDTSLMILMLAALQLMFEFVR*SYAGFS
Trigger: AGAGAAACCTGCGTAACTCCATCTGACAAATTCAAA...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR TCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGATGAAAATCTCTGCGTaGAGAATATGCTGTAGGTTT +
Preference number: 2 (lower is better)
Translates to: SCTPINVYRNATENSVKLMKISA*RICCRF
Trigger: AAACCTACAGCATATTCTTCACGCAGAGATTTTCAT...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR TCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTCTCTCTCTCTCTTTTaGATTTGTCAGATGGAGTTA +
Preference number: 2 (lower is better)
Translates to: SCTPINVYRNATENSVKLSLSLF*ICQMEL
Trigger: TAACTCCATCTGACAAATTCAAAAGAGAGAGAGAGA...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR GCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTATGATTGCTTTTGCATaGCATTTCCAAGTGGAACAT +
Preference number: 2 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFMIAFA*HFQVEH
Trigger: ATGTTCCACTTGGAAATGGCATGCAAAAGCAATCAT...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CCA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTTTTGAATTTGTCAGATaGAGTTACGCAGGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: TLDTSLMILMLAALQLMFFEFVR*SYAGFS
Trigger: AGAGAAACCTGCGTAACTCCATCTGACAAATTCAAA...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CCA 90 bp CTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTATCTTTGAATTTGTCAGATaGAGTTACGCAGGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: LDTSLMILMLAALQLMFIFEFVR*SYAGFS
Trigger: AGAGAAACCTGCGTAACTCCATCTGACAAATTCAAA...GATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CCA 90 bp ATATTTACCTTGTGCTTTCATGCAAATTTAGGGACCAAACTCAAAGGTTTCATCACTGTACACCGTAATTaGCATCTGTTAAAACAACTC +
Preference number: 2 (lower is better)
Translates to: IFTLCFHANLGTKLKGFITVHRN*HLLKQL
Trigger: GAGTTGTTTTAACAGATGCCAATTACGGTGTACAGT...GATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTAAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
3UTR-3UTR GCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGCAAATGAATCAGAACTaGAATCTGCACATGAAAAGA +
Preference number: 2 (lower is better)
Translates to: SCTPINVYRNATENSVKLQMNQN*NLHMKR
Trigger: TCTTTTCATGTGCAGATTGCAGTTCTGATTCATTTG...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
3UTR-3UTR CCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTTTTCCAAGTGGAACATaGCCAATCTTTGATAAAGTA +
Preference number: 2 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFFPSGT*PIFDKV
Trigger: TACTTTATCAAAGATTGGCCATGTTCCACTTGGAAA...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
34% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR CCA 72 bp GGAAGACGCCTCCGGTGTTGGAGACACAGCCTCGGGTaGTCGGGGTGGCATGCCTGTCATAGCCGCACACGC +
Preference number: 3 (lower is better)
Translates to: GRRLRCWRHSLG*SGWHACHSRTR
Trigger: GCGTGTGCGGCTATGACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp GGTGTTGGAGACACAGCCTCGGGTGGTCGGGGTGGCATGCCTGTCATAGCCGCAAAGACGCCTCCGGTGTaGGAGACACAGCCTCGGGTG +
Preference number: 3 (lower is better)
Translates to: GVGDTASGGRGGMPVIAAKTPPV*ETQPRV
Trigger: CACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTT...TGCGGCTATGACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCTCCAACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CCA 72 bp CTCCGGTGTTGGAGACACAGCCTCGGGTGGTCGGGGTaGCATGCCTGTCATAGCCGCACACGCCACACAGTA +
Preference number: 3 (lower is better)
Translates to: LRCWRHSLGWSG*HACHSRTRHTV
Trigger: TACTGTGTGGCGTGTGCGGCTATGACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCTCCAACACCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGAGACCAATGGTGCCGTaGCCTTGGTGCCCGCCTGAG +
Preference number: 3 (lower is better)
Translates to: GARLSHYVATGVAPGFGKRPMVP*PWCPPE
Trigger: CTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCT...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR TCA 72 bp CCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTGGCGTTGCTCCTGGAT +
Preference number: 3 (lower is better)
Translates to: PETNGAVALVPA*VTTLPLALLLD
Trigger: ATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR GCA 72 bp AGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTaGCCGCCTGAGTCACTACGTTGCCACTGGCGTTGC +
Preference number: 3 (lower is better)
Translates to: STTQRPMVPLPW*PPESLRCHWRC
Trigger: GCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR GCA 72 bp TGCCAAACCCAGAGACCAATGGTGCCGTTGCCTTGGTaGCCGCCTGAGTCACTACGTTGCCACTGGCGTTGC +
Preference number: 3 (lower is better)
Translates to: CQTQRPMVPLPW*PPESLRCHWRC
Trigger: GCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTTTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR CCA 72 bp TGGTGCCAAACCCAGAGACCAATGGTGCCGTTGCCTTaGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGT +
Preference number: 3 (lower is better)
Translates to: WCQTQRPMVPLP*CPPESLRCHWR
Trigger: ACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTTTGGCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR-3UTR CAA 90 bp GGTGTTGGAGACACAGCCTCGGGTGGTCGGGGTGGCATGCCTGTCATAGCCGCATACGACAGTCGTGGTTaGGCGTTGTACTCTGTCAGG +
Preference number: 3 (lower is better)
Translates to: GVGDTASGGRGGMPVIAAYDSRG*ALYSVR
Trigger: CCTGACAGAGTACAACGCCAAACCACGACTGTCGTA...TGCGGCTATGACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCTCCAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR GCA 72 bp AGAAGTGGTGCCAAACCCAGAGACCAATGGTGCCGTTaGCTTGGTGCCCGCCTGAGTCACTACGTTGCCACT +
Preference number: 3 (lower is better)
Translates to: RSGAKPRDQWCR*LGARLSHYVAT
Trigger: AGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTTTGGCACCACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR-3UTR CAA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCGTGATCCTTTCCACTTaGAGTATCCTGATGCTCAAG +
Preference number: 3 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSVILST*SILMLK
Trigger: CTTGAGCATCAGGATACTCAAAGTGGAAAGGATCAC...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR CAA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGGGGAGGGAGTCATCCTaGAATAGTGATGGACCATGG +
Preference number: 3 (lower is better)
Translates to: GARLSHYVATGVAPGFGKGRESS*NSDGPW
Trigger: CCATGGTCCATCACTATTCAAGGATGACTCCCTCCC...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR GCA 72 bp CTTCCAAGAAGTGGTGCCAAACCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTT +
Preference number: 3 (lower is better)
Translates to: LPRSGAKPRDQW*RCLGARLSHYV
Trigger: AACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTTTGGCACCACTTCTTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR GCA 72 bp TGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTaGTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAA +
Preference number: 3 (lower is better)
Translates to: WCPPESLRCHWR*SWIWKVLVDPE
Trigger: TTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR CCA 72 bp TTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTaGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGAC +
Preference number: 3 (lower is better)
Translates to: LPWCPPESLRCH*RCSWIWKVLVD
Trigger: GTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR CAA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCGGGAGGGAGTCATCCTaGAATAGTGATGGACCATGG +
Preference number: 3 (lower is better)
Translates to: SFLKHYPETNGAVALVPAGRESS*NSDGPW
Trigger: CCATGGTCCATCACTATTCAAGGATGACTCCCTCCC...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR CAA 90 bp AATCCAACTCCAACCATGAGGAAGACGCCTCCGGTGTTGGAGACACAGCCTCGGTTCTCCAACGCCTCTTaGGTCTCCTTGATCGCTGTT +
Preference number: 3 (lower is better)
Translates to: NPTPTMRKTPPVLETQPRFSNAS*VSLIAV
Trigger: AACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAA...CCGAGGCTGTGTCTCCAACACCGGAGGCGTCTTCCTCATGGTTGGAGTTGGATT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR GCA 72 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTaGCTTGGTGCCCGCCTGAGTCACTACGTTGCCACT +
Preference number: 3 (lower is better)
Translates to: ILKALPRDQWCR*LGARLSHYVAT
Trigger: AGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR CCA 72 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTaGATTTGGAAAGTCCTTGTAGACCCAGAAACTACC +
Preference number: 3 (lower is better)
Translates to: PPESLRCHWRCS*IWKVLVDPETT
Trigger: GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR CAA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGTGATCCTTTCCACTTaGAGTATCCTGATGCTCAAG +
Preference number: 3 (lower is better)
Translates to: CLGARLSHYVATGVAPGFVILST*SILMLK
Trigger: CTTGAGCATCAGGATACTCAAAGTGGAAAGGATCAC...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR CAA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACGTGATCCTTTCCACTTaGAGTATCCTGATGCTCAAG +
Preference number: 3 (lower is better)
Translates to: KALPRDQWCRCLGARLSHVILST*SILMLK
Trigger: CTTGAGCATCAGGATACTCAAAGTGGAAAGGATCAC...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR CAA 90 bp TGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTAAGGGAAGACCAATGGTGCCGTaGCCTTGGTGCCCGCCTGAG +
Preference number: 3 (lower is better)
Translates to: CYDSRGLALYSVRYIIKGRPMVP*PWCPPE
Trigger: CTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCT...TCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR GCA 72 bp GTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTT +
Preference number: 3 (lower is better)
Translates to: VFILKALPRDQW*RCLGARLSHYV
Trigger: AACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR CAA 90 bp AAACTTGCTTGCAACTCTGGCACAGCCTTCCTTCCACCTGGATATCCTGAGTCCGCGTTGCTCCTGGATTaGGAAAGTCCTTGTAGACCC +
Preference number: 3 (lower is better)
Translates to: KLACNSGTAFLPPGYPESALLLD*ESPCRP
Trigger: GGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC...GGACTCAGGATATCCAGGTGGAAGGAAGGCTGTGCCAGAGTTGCAAGCAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR-3UTR CAA 90 bp AAGGTGCTGTTCATGTTCTCCAACGCCTCTTTGGTCTCCTTGATCGCTGTTGCCAGGCAGGAGGATCACTaGTGTGCTGAGATAACCTCC +
Preference number: 3 (lower is better)
Translates to: KVLFMFSNASLVSLIAVARQEDH*CAEITS
Trigger: GGAGGTTATCTCAGCACACAAGTGATCCTCCTGCCT...GGCAACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR TCA 72 bp CAACTCTGGCACAGCCTTCCTTCCACCTGGATATCCTaGGTCCTGAGAAGACCTAGTAGGGCTGGAACTAAA +
Preference number: 3 (lower is better)
Translates to: QLWHSLPSTWIS*VLRRPSRAGTK
Trigger: TTTAGTTCCAGCCCTACTAGGTCTTCTCAGGACTCAGGATATCCAGGTGGAAGGAAGGCTGTGCCAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR TCA 72 bp GATTTCTTCACAGTTTGGCTTACTTCCTTCACACCATaGGGAAGACGCCTCCGGTGTTGGAGACACAGCCTC +
Preference number: 3 (lower is better)
Translates to: DFFTVWLTSFTP*GRRLRCWRHSL
Trigger: GAGGCTGTGTCTCCAACACCGGAGGCGTCTTCCTCATGGTGTGAAGGAAGTAAGCCAAACTGTGAAGAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR CCA 72 bp ATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATaGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTAC +
Preference number: 3 (lower is better)
Translates to: IVFILKALPRDQ*CRCLGARLSHY
Trigger: GTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR CAA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGACGTTGCCACTGGCGTaGCTCCTGGATTTGGAAAGT +
Preference number: 3 (lower is better)
Translates to: LCSFLKHYPETNGAVALVTLPLA*LLDLES
Trigger: ACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGT...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR CAA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGAGACCAATGGTGCCGTaGCCTTGGTGCCCGCCTGAG +
Preference number: 3 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQRPMVP*PWCPPE
Trigger: CTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCT...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR GCA 72 bp GACAATCTGATGCTGTTGCAGGTTTCACTTGATGGATaGACCAAGCACAGAGGGTCATTGAGAGATGACCGC +
Preference number: 3 (lower is better)
Translates to: DNLMLLQVSLDG*TKHRGSLRDDR
Trigger: GCGGTCATCTCTCAATGACCCTCTGTGCTTGGTGCATCCATCAAGTGAAACCTGCAACAGCATCAGATTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CCA 72 bp ACGCTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTaGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCC +
Preference number: 3 (lower is better)
Translates to: TLVRLLLSCVLC*CKLFKVLFMFS
Trigger: GGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAGGGAGGGAGTCATCCTaGAATAGTGATGGACCATGG +
Preference number: 3 (lower is better)
Translates to: LALLLDLESPCRPRNYQKGRESS*NSDGPW
Trigger: CCATGGTCCATCACTATTCAAGGATGACTCCCTCCC...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR-3UTR CAA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGATTTCTCCACCACATTaGTTACAGCAACGACACATA +
Preference number: 3 (lower is better)
Translates to: ILKALPRDQWCRCLGARLISPPH*LQQRHI
Trigger: TATGTGTCGTTGCTGTAACAAATGTGGTGGAGAAAT...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR CAA 90 bp ACCCTTTTGATACCTGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTCGCAAGTCCTTGAAATaGCTATCTGCCAGTTTCCGA +
Preference number: 3 (lower is better)
Translates to: TLLIPATTVVVWRCTLSGRKSLK*LSASFR
Trigger: TCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCG...ACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATCAAAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp CTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGCGCAAGTCCTTGAAATaGCTATCTGCCAGTTTCCGA +
Preference number: 3 (lower is better)
Translates to: LVRLLLSCVLCWCKLFKVRKSLK*LSASFR
Trigger: TCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCG...CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACGTGAACGCCTTGTCCTaGGTAGTGTTGTACTGGGCC +
Preference number: 3 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHVNALS*VVLYWA
Trigger: GGCCCAGTACAACACTACCAAGGACAAGGCGTTCAC...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR CAA 90 bp AGTTTTCACGCTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTAGAACAGGGATGATGTaGGGTCTCAGTCGGTCAAGA +
Preference number: 3 (lower is better)
Translates to: SFHAGQTAAKLCTLLVQARTGMM*GLSRSR
Trigger: TCTTGACCGACTGAGACCCAACATCATCCCTGTTCT...AGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAGCGTGAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp TTGTACTCTGTCAGGTATATCATTAAGGGATTGATAGCCCTGTTGGACCAGGCCAAGCACAGAGGGTCATaGAGAGATGACCGCAGGCTA +
Preference number: 3 (lower is better)
Translates to: LYSVRYIIKGLIALLDQAKHRGS*RDDRRL
Trigger: TAGCCTGCGGTCATCTCTCAATGACCCTCTGTGCTT...GGCCTGGTCCAACAGGGCTATCAATCCCTTAATGATATACCTGACAGAGTACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp CTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCCAACGCTGCCTCAGTTCAGGGTaGCTATTCAGCTGGCTTAGA +
Preference number: 3 (lower is better)
Translates to: LCTLLVQALQGAVHVLQRCLSSG*LFSWLR
Trigger: TCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGCA...GCGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp AGTTTTCACGCTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTTGCCTCAGTTCAGGGTaGCTATTCAGCTGGCTTAGA +
Preference number: 3 (lower is better)
Translates to: SFHAGQTAAKLCTLLVQACLSSG*LFSWLR
Trigger: TCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGCA...AGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAGCGTGAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp TTGTACTCTGTCAGGTATATCATTAAGGGATTGATAGCCCTGTTGGACCAGGCCAGAACAGGGATGATGTaGGGTCTCAGTCGGTCAAGA +
Preference number: 3 (lower is better)
Translates to: LYSVRYIIKGLIALLDQARTGMM*GLSRSR
Trigger: TCTTGACCGACTGAGACCCAACATCATCCCTGTTCT...GGCCTGGTCCAACAGGGCTATCAATCCCTTAATGATATACCTGACAGAGTACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp CTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGAAGCTGTGTACTTTGTaGGTGCAAGCTCTTCAAGGT +
Preference number: 3 (lower is better)
Translates to: LVRLLLSCVLCWCKLFKVKLCTL*VQALQG
Trigger: ACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTT...CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAGGGAGGGAGTCATCCTaGAATAGTGATGGACCATGG +
Preference number: 3 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPGRESS*NSDGPW
Trigger: CCATGGTCCATCACTATTCAAGGATGACTCCCTCCC...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CAA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAGATACTCCGATAAACTaGCTTGCAACTCTGGCACAG +
Preference number: 3 (lower is better)
Translates to: LALLLDLESPCRPRNYQKDTPIN*LATLAQ
Trigger: CTGTGCCAGAGTTGCAAGCAAGTTTATCGGAGTATC...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503884.5
3UTR-3UTR CAA 90 bp CTTAGAGACAATCTGATGCTGTTGCAGGTTTCACTTGATGGATGCACCAAGCACTCACCAACAGGGAGATaGCAAAGCATTTCCTCAGGA +
Preference number: 3 (lower is better)
Translates to: LRDNLMLLQVSLDGCTKHSPTGR*QSISSG
Trigger: TCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGA...GTGCTTGGTGCATCCATCAAGTGAAACCTGCAACAGCATCAGATTGTCTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp ATGATGATTTCTTCACAGTTTGGCTTACTTCCTTCACACCATGAGGAAGACGCCTTCTCCAACGCCTCTTaGGTCTCCTTGATCGCTGTT +
Preference number: 3 (lower is better)
Translates to: MMISSQFGLLPSHHEEDAFSNAS*VSLIAV
Trigger: AACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAA...GGCGTCTTCCTCATGGTGTGAAGGAAGTAAGCCAAACTGTGAAGAAATCATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR-3UTR CAA 90 bp TGGCTTAGAGACAATCTGATGCTGTTGCAGGTTTCACTTGATGGATGCACCAAGAGGCAAAAATTCCCCTaGTCCTCTTTCTGGCTTCGT +
Preference number: 3 (lower is better)
Translates to: WLRDNLMLLQVSLDGCTKRQKFP*SSFWLR
Trigger: ACGAAGCCAGAAAGAGGACAAGGGGAATTTTTGCCT...CTTGGTGCATCCATCAAGTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR-3UTR CAA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGGCGTTGCTCCTGGATTaGGAAAGTCCTTGTAGACCC +
Preference number: 3 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQALLLD*ESPCRP
Trigger: GGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CAA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACAACGTTGCCACTGGCGTaGCTCCTGGATTTGGAAAGT +
Preference number: 3 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTTLPLA*LLDLES
Trigger: ACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGT...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CAA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGACGTTGCCACTGGCGTaGCTCCTGGATTTGGAAAGT +
Preference number: 3 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQTLPLA*LLDLES
Trigger: ACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGT...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CAA 90 bp GATACCTGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTAGAGTTCGCAAGTCCTaGAAATTGCTATCTGCCAGT +
Preference number: 3 (lower is better)
Translates to: DTCYDSRGLALYSVRYIIRVRKS*KLLSAS
Trigger: ACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCT...AATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp TGGCTTAGAGACAATCTGATGCTGTTGCAGGTTTCACTTGATGGATGCACCAAGAGAGTTCGCAAGTCCTaGAAATTGCTATCTGCCAGT +
Preference number: 3 (lower is better)
Translates to: WLRDNLMLLQVSLDGCTKRVRKS*KLLSAS
Trigger: ACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCT...CTTGGTGCATCCATCAAGTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp TCTGAACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACAGTCGTGGTTAGATCTGTGAACGCCTaGTCCTTGGTAGTGTTGTAC +
Preference number: 3 (lower is better)
Translates to: SEPMEFKTLLIPATTVVVRSVNA*SLVVLY
Trigger: GTACAACACTACCAAGGACAAGGCGTTCACAGATCT...AACCACGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp ATCTGTCCTAAGAACGTTATTAACGTTGTCAAGTTCTGCATCCACGGGTGGAAGAGTCGTGGTTTGGCGTaGTACTCTGTCAGGTATATC +
Preference number: 3 (lower is better)
Translates to: ICPKNVINVVKFCIHGWKSRGLA*YSVRYI
Trigger: GATATACCTGACAGAGTACAACGCCAAACCACGACT...CTTCCACCCGTGGATGCAGAACTTGACAACGTTAATAACGTTCTTAGGACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp TTGTCGATATCTGAACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACAAGTTTCCGACTCCTTTaGATCCGGGTTCTTACCTGG +
Preference number: 3 (lower is better)
Translates to: LSISEPMEFKTLLIPATTSFRLL*IRVLTW
Trigger: CCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAACT...TGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGATATCGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp TTGCTCTGGAGTTTCATTCAAGAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCAGATCTGTGAACGCCTaGTCCTTGGTAGTGTTGTAC +
Preference number: 3 (lower is better)
Translates to: LLWSFIQESSQVLEIAICRSVNA*SLVVLY
Trigger: GTACAACACTACCAAGGACAAGGCGTTCACAGATCT...GCAGATAGCAATTTCAAGGACTTGCGAACTCTCTTGAATGAAACTCCAGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp AAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCCAACCTCCTAGCACTGAATaGATACTGTTCAGATCTGTG +
Preference number: 3 (lower is better)
Translates to: KLCTLLVQALQGAVHVLQPPSTE*ILFRSV
Trigger: CACAGATCTGAACAGTATCAATTCAGTGCTAGGAGG...TTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTGCCTCTTTGGTCTCCTaGATCGCTGTTGCCATGGAC +
Preference number: 3 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSASLVS*IAVAMD
Trigger: GTCCATGGCAACAGCGATCAAGGAGACCAAAGAGGC...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR CAA 90 bp TCTGAACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACAGTCGTGGTTAAGCTGTGTACTTTGTaGGTGCAAGCTCTTCAAGGT +
Preference number: 3 (lower is better)
Translates to: SEPMEFKTLLIPATTVVVKLCTL*VQALQG
Trigger: ACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTT...AACCACGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR TCA 72 bp CTAGTTACTCTCTCCAACAATCCATTCCCTGTGCGTTaGAGTATCTTGACGCTTTGGTATAGAGTGCTCAGT +
Preference number: 3 (lower is better)
Translates to: LVTLSNNPFPVR*SILTLWYRVLS
Trigger: ACTGAGCACTCTATACCAAAGCGTCAAGATACTTCAACGCACAGGGAATGGATTGTTGGAGAGAGTAACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR GCA 72 bp ATTCAAGAGAGTTCGCAAGTCCTTGAAATTGCTATCTaGCAGTTTCCGACTCCTTTTGATCCGGGTTCTTAC +
Preference number: 3 (lower is better)
Translates to: IQESSQVLEIAI*QFPTPFDPGSY
Trigger: GTAAGAACCCGGATCAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTCTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CCA 72 bp AAGACCCTTTTGATACCTGCTACGACAGTCGTGGTTTaGCGTTGTACTCTGTCAGGTATATCATTAAGGGAT +
Preference number: 3 (lower is better)
Translates to: KTLLIPATTVVV*RCTLSGISLRD
Trigger: ATCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATCAAAAGGGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CCA 72 bp CAAAGTATCATTCTTGATAAATTAGGCTGGTCATGGTaGCTTACGTCTACAGTTCCAGCTACTCAGGAGGCT +
Preference number: 3 (lower is better)
Translates to: QSIILDKLGWSW*LTSTVPATQEA
Trigger: AGCCTCCTGAGTAGCTGGAACTGTAGACGTAAGCCACCATGACCAGCCTAATTTATCAAGAATGATACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR TCA 72 bp TCTCCAACAATCCATTCCCTGTGCGTTGAAGTATCTTaGCGCTTTGGTATAGAGTGCTCAGTGATTGTTCTA +
Preference number: 3 (lower is better)
Translates to: SPTIHSLCVEVS*RFGIECSVIVL
Trigger: TAGAACAATCACTGAGCACTCTATACCAAAGCGTCAAGATACTTCAACGCACAGGGAATGGATTGTTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR CCA 72 bp TCTCAAAGTATCATTCTTGATAAATTAGGCTGGTCATaGTGGCTTACGTCTACAGTTCCAGCTACTCAGGAG +
Preference number: 3 (lower is better)
Translates to: SQSIILDKLGWS*WLTSTVPATQE
Trigger: CTCCTGAGTAGCTGGAACTGTAGACGTAAGCCACCATGACCAGCCTAATTTATCAAGAATGATACTTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR-3UTR CAA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCACGTTGCCACTGGCGTaGCTCCTGGATTTGGAAAGT +
Preference number: 3 (lower is better)
Translates to: NVYRNATENSVKLYTVIGTLPLA*LLDLES
Trigger: ACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGT...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CAA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTGGGAGGGAGTCATCCTaGAATAGTGATGGACCATGG +
Preference number: 3 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESGRESS*NSDGPW
Trigger: CCATGGTCCATCACTATTCAAGGATGACTCCCTCCC...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CAA 90 bp TCTGAACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACAGTCGTGGTTATTTCTCCACCACATTaGTTACAGCAACGACACATA +
Preference number: 3 (lower is better)
Translates to: SEPMEFKTLLIPATTVVVISPPH*LQQRHI
Trigger: TATGTGTCGTTGCTGTAACAAATGTGGTGGAGAAAT...AACCACGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp TTATACAAATCACCAACAGGGAGATTGCAAAGCATTTCCTCAGGAAGGGCCCATTTCTTACCTGGTGATTaGCCACAAAACCATAGAAGA +
Preference number: 3 (lower is better)
Translates to: LYKSPTGRLQSISSGRAHFLPGD*PQNHRR
Trigger: TCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGAA...ATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR TCA 72 bp TCATCCTTGAATAGTGATGGACCATGGACTATAACGTaGTTGTGTTCATTCTTAAAGCACTACCCAGAGACC +
Preference number: 3 (lower is better)
Translates to: SSLNSDGPWTIT*LCSFLKHYPET
Trigger: GGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCATGGTCCATCACTATTCAAGGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR TCA 72 bp CTGAATAGGAAGACGCTGAGTTACATTGTCGATATCTaGACCAATGGAATTCAAGACCCTTTTGATACCTGC +
Preference number: 3 (lower is better)
Translates to: LNRKTLSYIVDI*TNGIQDPFDTC
Trigger: GCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGATATCGACAATGTAACTCAGCGTCTTCCTATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR GCA 72 bp TGCAAATTTAGGGACCAAACTCAAAGGTTTCATCCATaGTGGACACCAGATCTAAGAATTGTGACAGGATCT +
Preference number: 3 (lower is better)
Translates to: CKFRDQTQRFHP*WTPDLRIVTGS
Trigger: AGATCCTGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTCCCTAAATTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
3UTR GCA 72 bp GTAAGTAGGGTGTATCCAAAACCCGGAATAATTCCTTaGTCGTGTAAGGTTCACAGATCAGTTTTTCCACAT +
Preference number: 3 (lower is better)
Translates to: VSRVYPKPGIIP*SCKVHRSVFPH
Trigger: ATGTGGAAAAACTGATCTGTGAACCTTACACGAGCAAGGAATTATTCCGGGTTTTGGATACACCCTACTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR CCA 72 bp AATGAATCAGAACTGCAATCTGCACATGAAAAGACCTaGGGGGAATGCCTACATCTGGAATTTCATTACATC +
Preference number: 3 (lower is better)
Translates to: NESELQSAHEKT*GECLHLEFHYI
Trigger: GATGTAATGAAATTCCAGATGTAGGCATTCCCCCCAGGTCTTTTCATGTGCAGATTGCAGTTCTGATTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
3UTR CCA 72 bp AGATCTGTGAACGCCTTGTCCTTGGTAGTGTTGTACTaGGCCAATATATATTTGATTTGCTCTGGAGTTTCA +
Preference number: 3 (lower is better)
Translates to: RSVNALSLVVLY*ANIYLICSGVS
Trigger: TGAAACTCCAGAGCAAATCAAATATATATTGGCCCAGTACAACACTACCAAGGACAAGGCGTTCACAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR-3UTR CAA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTTCACCAACAGGGAGATaGCAAAGCATTTCCTCAGGA +
Preference number: 3 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSSPTGR*QSISSG
Trigger: TCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGA...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR CAA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGAGTTTCCGACTCCTTTaGATCCGGGTTCTTACCTGG +
Preference number: 3 (lower is better)
Translates to: SCTPINVYRNATENSVKLSFRLL*IRVLTW
Trigger: CCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAACT...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR-3UTR CAA 90 bp TTGTCGATATCTGAACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACATATATCATTAAGGGATaGATAGCCCTGTTGGACCAG +
Preference number: 3 (lower is better)
Translates to: LSISEPMEFKTLLIPATTYIIKG*IALLDQ
Trigger: CTGGTCCAACAGGGCTATCAATCCCTTAATGATATA...TGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGATATCGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CCA 72 bp AAATTTAGGGACCAAACTCAAAGGTTTCATCCATGCTaGACACCAGATCTAAGAATTGTGACAGGATCTTCT +
Preference number: 3 (lower is better)
Translates to: KFRDQTQRFHPC*TPDLRIVTGSS
Trigger: AGAAGATCCTGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTCCCTAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
3UTR TCA 72 bp AACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTaGATTTGTCAGATGGAGTTACGCAGGTTTCTCTAT +
Preference number: 3 (lower is better)
Translates to: NSISLSRSLSLF*ICQMELRRFLY
Trigger: ATAGAGAAACCTGCGTAACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR GCA 72 bp AATGCTTATTATTATACAAATCACCAACAGGGAGATTaGAAAGCATTTCCTCAGGAAGGGCCCATTTTCCTT +
Preference number: 3 (lower is better)
Translates to: NAYYYTNHQQGD*KAFPQEGPIFL
Trigger: AAGGAAAATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTTGTATAATAATAAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CCA 72 bp TCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATaGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCA +
Preference number: 3 (lower is better)
Translates to: SQDLSLSFEFVR*SYAGFSMIAFA
Trigger: TGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR CCA 72 bp GAATTTTCTCAAAGTATCATTCTTGATAAATTAGGCTaGTCATGGTGGCTTACGTCTACAGTTCCAGCTACT +
Preference number: 3 (lower is better)
Translates to: EFSQSIILDKLG*SWWLTSTVPAT
Trigger: AGTAGCTGGAACTGTAGACGTAAGCCACCATGACCAGCCTAATTTATCAAGAATGATACTTTGAGAAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR GCA 72 bp AACAAAAGGTATATACACCGTTTACTGTACACAAAATaGATCTTTCCTGTAAACTGGTGTGTGTTCAGCACA +
Preference number: 3 (lower is better)
Translates to: NKRYIHRLLYTK*IFPVNWCVFST
Trigger: TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CAA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGATCTCTCTCTCTCTTTaGAATTTGTCAGATGGAGTT +
Preference number: 3 (lower is better)
Translates to: RTLDTSLMILMLAALQLMISLSL*NLSDGV
Trigger: AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGAT...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR-3UTR CAA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTTGGGCCAATATATATTaGATTTGCTCTGGAGTTTCA +
Preference number: 3 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESWANIY*ICSGVS
Trigger: TGAAACTCCAGAGCAAATCAAATATATATTGGCCCA...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR TCA 72 bp GTGGAACATGGCCAATCTTTGATAAAGTATAATAGATaGAAATCTCTGCGTGAAGAATATGCTGTAGGTTTC +
Preference number: 3 (lower is better)
Translates to: VEHGQSLIKYNR*KSLREEYAVGF
Trigger: GAAACCTACAGCATATTCTTCACGCAGAGATTTTCATCTATTATACTTTATCAAAGATTGGCCATGTTCCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTCAGCAGAGAGCAGATaGCCAGGCCACCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSSAESR*PGHPAT
Trigger: GGTGGCTGGGTGGCCTGGTCATCTGCTCTCTGCTGA...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCAGACACAGCCTCGGGTaGTCGGGGTGGCATGCCTGT +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSRHSLG*SGWHAC
Trigger: ACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCT...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACGAGAGCATGGCCAGGTaGCGCGTGGGGATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHESMAR*RVGICL
Trigger: GAGGCAGATCCCCACGCGGCACCTGGCCATGCTCTC...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS-3UTR TCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCATCCAACTCCAACCATaGGGAAGACGCCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSIQLQP*GRRLRC
Trigger: ACACCGGAGGCGTCTTCCTCATGGTTGGAGTTGGAT...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: CLGARLSHYVATGVAPGFALVPA*VTTLPL
Trigger: CAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGC...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGALVPA*VTTLPL
Trigger: CAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGC...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTCCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: CLGARLSHYVATGVAPGFPRDQW*RCLGAR
Trigger: GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGG...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR CAA 72 bp AATCCAACTCCAACCATGAGGAAGACGCCTCCGGTGTaGGAGACACAGCCTCGGGTGGTCGGGGTGGCATGC +
Preference number: 4 (lower is better)
Translates to: NPTPTMRKTPPV*ETQPRVVGVAC
Trigger: GCATGCCACCCCGACCACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTTCCTCATGGTTGGAGTTGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR CAA 72 bp TACTTCCTTCACACCATGAGGAAGACGCCTCCGGTGTaGGAGACACAGCCTCGGGTGGTCGGGGTGGCATGC +
Preference number: 4 (lower is better)
Translates to: YFLHTMRKTPPV*ETQPRVVGVAC
Trigger: GCATGCCACCCCGACCACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTTCCTCATGGTGTGAAGGAAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS-3UTR TCA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTTGTCTGAGGCTGGCTTaGGGCGAGGGATGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: CLGARLSHYVATGVAPGFCLRLA*GEGCGR
Trigger: TCTTCCGCATCCCTCGCCTCAAGCCAGCCTCAGACA...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCTGATTGGACCGGCTaGGCTGCTTCGCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: GARLSHYVATGVAPGFGKSDWTG*AASPRS
Trigger: GCTACGTGGCGAAGCAGCTCAGCCGGTCCAATCAGA...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS-3UTR GCA 90 bp AGACACAGCCTCGGGTGGTCGGGGTGGCATGCCTGTCATAGCCGCACACGCCACGCCTCAGTTCAGGGTTaGTATTCAGCTGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: RHSLGWSGWHACHSRTRHASVQG*YSAGLE
Trigger: CTCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGC...GTGGCGTGTGCGGCTATGACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CCA 90 bp GACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCTTCTGCATCCACGGGTaGAAGCTGCCTCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: DQWCRCLGARLSHYVATGFCIHG*KLPQFR
Trigger: CCTGAACTGAGGCAGCTTCCACCCGTGGATGCAGAA...GCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCGTTTCCGACTCCTTTTaGTCCGGGTTCTTACCTGGT +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSVSDSF*SGFLPG
Trigger: ACCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAAC...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCGGAGAGCTGAGAGCATaGCCAGGTGCCGCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARGELRA*PGAAWG
Trigger: TCCCCACGCGGCACCTGGCCATGCTCTCAGCTCTCC...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447510.7
ENST00000505450.5
CDS-3UTR CCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCACGACAGTCGTGGTTTaGCGTTGTACTCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSTTVVV*RCTLSG
Trigger: ACCTGACAGAGTACAACGCCAAACCACGACTGTCGT...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCCTGCTACGACAGTCGTaGTTTGGCGTTGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSLLRQS*FGVVLC
Trigger: ACAGAGTACAACGCCAAACCACGACTGTCGTAGCAG...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTAGACACAGCCTCGGGTaGTCGGGGTGGCATGCCTGT +
Preference number: 4 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLRHSLG*SGWHAC
Trigger: ACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCT...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp AGACACAGCCTCGGGTGGTCGGGGTGGCATGCCTGTCATAGCCGCACACGCCACACCCAGCCACCAGTATaGATCATACTCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: RHSLGWSGWHACHSRTRHTQPPV*IILFQC
Trigger: ACATTGGAAGAGTATGATTCATACTGGTGGCTGGGT...GTGGCGTGTGCGGCTATGACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAATCCAACTCCAACCATaGGGAAGACGCCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGIQLQP*GRRLRC
Trigger: ACACCGGAGGCGTCTTCCTCATGGTTGGAGTTGGAT...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp GCTCTTCAAGGTGCTGTTCATGTTCTCCAACGCCTCTTTGGTCTCCTTGATCGCCTCGGGTGGTCGGGGTaGCATGCCTGTCATAGCCGC +
Preference number: 4 (lower is better)
Translates to: ALQGAVHVLQRLFGLLDRLGWSG*HACHSR
Trigger: GCGGCTATGACAGGCATGCCACCCCGACCACCCGAG...GCGATCAAGGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTTGAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CCA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCCTCGGGTGGTCGGGGTaGCATGCCTGTCATAGCCGC +
Preference number: 4 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTLGWSG*HACHSR
Trigger: GCGGCTATGACAGGCATGCCACCCCGACCACCCGAG...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR CAA 72 bp AAGAAGTGGTGCCAAACCCAGAGACCAATGGTGCCGTaGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: KKWCQTQRPMVP*PWCPPESLRCH
Trigger: GTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTTTGGCACCACTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS-3UTR TCA 90 bp GGTGTTGGAGACACAGCCTCGGGTGGTCGGGGTGGCATGCCTGTCATAGCCGCAGAGTTCGCAAGTCCTTaGAATTGCTATCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: GVGDTASGGRGGMPVIAAEFASP*NCYLPV
Trigger: AACTGGCAGATAGCAATTTCAAGGACTTGCGAACTC...TGCGGCTATGACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCTCCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCACCCAGCCACCAGTATaGATCATACTCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSTQPPV*IILFQC
Trigger: ACATTGGAAGAGTATGATTCATACTGGTGGCTGGGT...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCCCCGGAATAATTCCTTaGTCGTGTAAGGTTCACAGA +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSPGIIP*SCKVHR
Trigger: TCTGTGAACCTTACACGAGCAAGGAATTATTCCGGG...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCACCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPPRDQW*RCLGAR
Trigger: GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGG...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAAGACGCCTCCGGTGTTaGAGACACAGCCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPRRLRC*RHSLGW
Trigger: CCACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCT...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGCAGTATCTAGAGCGGTaGCCACAGGTTTGCACGATG +
Preference number: 4 (lower is better)
Translates to: GARLSHYVATGVAPGFGKQYLER*PQVCTM
Trigger: CATCGTGCAAACCTGTGGCCACCGCTCTAGATACTG...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACCAGTATCTAGAGCGGTaGCCACAGGTTTGCACGATG +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHQYLER*PQVCTM
Trigger: CATCGTGCAAACCTGTGGCCACCGCTCTAGATACTG...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp GACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCCGTTGCTCCTGGATTTaGAAAGTCCTTGTAGACCCA +
Preference number: 4 (lower is better)
Translates to: DQWCRCLGARLSHYVATGRCSWI*KVLVDP
Trigger: TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG...GCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp GACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCCACTGGCGTTGCTCCTaGATTTGGAAAGTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: DQWCRCLGARLSHYVATGHWRCS*IWKVLV
Trigger: TACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTG...GCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACGTTTCCGACTCCTTTTaGTCCGGGTTCTTACCTGGT +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHVSDSF*SGFLPG
Trigger: ACCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAAC...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGTTTCCGACTCCTTTTaGTCCGGGTTCTTACCTGGT +
Preference number: 4 (lower is better)
Translates to: CLGARLSHYVATGVAPGFVSDSF*SGFLPG
Trigger: ACCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAAC...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGTTGCAGGTTTCACTTaGTGGATGCACCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: CLGARLSHYVATGVAPGFVAGFT*WMHQAQ
Trigger: CTGTGCTTGGTGCATCCATCAAGTGAAACCTGCAAC...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTATCCAACTCCAACCATaGGGAAGACGCCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLIQLQP*GRRLRC
Trigger: ACACCGGAGGCGTCTTCCTCATGGTTGGAGTTGGAT...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp GATAAACTTGCTTGCAACTCTGGCACAGCCTTCCTTCCACCTGGATATCCTGAGGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: DKLACNSGTAFLPPGYPEALVPA*VTTLPL
Trigger: CAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGC...CTCAGGATATCCAGGTGGAAGGAAGGCTGTGCCAGAGTTGCAAGCAAGTTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS-3UTR TCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAGGAGGGAGTCATCCTTaGATAGTGATGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGGGSHP*IVMDHG
Trigger: TCCATGGTCCATCACTATTCAAGGATGACTCCCTCC...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAGGGAGTCATCCTTaGATAGTGATGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: CLGARLSHYVATGVAPGFGGSHP*IVMDHG
Trigger: TCCATGGTCCATCACTATTCAAGGATGACTCCCTCC...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGATCTGTGGATGAAGGCTaGCCTCCTGAAAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGSVDEG*PPEKEF
Trigger: GAACTCCTTTTCAGGAGGGCAGCCTTCATCCACAGA...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTTCTGTGGATGAAGGCTaGCCTCCTGAAAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: CLGARLSHYVATGVAPGFSVDEG*PPEKEF
Trigger: GAACTCCTTTTCAGGAGGGCAGCCTTCATCCACAGA...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCTGTGGATGAAGGCTaGCCTCCTGAAAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: GARLSHYVATGVAPGFGKSVDEG*PPEKEF
Trigger: GAACTCCTTTTCAGGAGGGCAGCCTTCATCCACAGA...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCTCTGCAGGTGAAGAGTaGCGTAAGTGCCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: DQWCRCLGARLSHYVATGSAGEE*RKCLYF
Trigger: AAAATAGAGGCACTTACGGCACTCTTCACCTGCAGA...GCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CTGAGCTTCGGCAGCCACTGTGTGTGTAGCAGTGAGAGCCTTCCAGAAGAGGGCGCTTCCAAGAAGTGGTaGCAAACCCAGAGACCAATG +
Preference number: 4 (lower is better)
Translates to: LSFGSHCVCSSESLPEEGASKKW*QTQRPM
Trigger: CATTGGTCTCTGGGTTTGGCACCACTTCTTGGAAGC...GCCCTCTTCTGGAAGGCTCTCACTGCTACACACACAGTGGCTGCCGAAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS-3UTR CCA 90 bp GACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCTCTCAAAGTATCTTCTaGGAAATCACGCGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: DQWCRCLGARLSHYVATGSQSIF*EITRLY
Trigger: GTACAGCCGCGTGATTTCCCAGAAGATACTTTGAGA...GCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTTTCTGCATCCACGGGTaGAAGCTGCCTCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLFCIHG*KLPQFR
Trigger: CCTGAACTGAGGCAGCTTCCACCCGTGGATGCAGAA...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGAGACGCCTCCGGTGTTaGAGACACAGCCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LVRLLLSCVLCWCKLFKVRRLRC*RHSLGW
Trigger: CCACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCT...CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTACCCAGAGACCAATaGTGCCGTTGCCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARLPRDQ*CRCLGA
Trigger: GGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAG...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACGCACATGAAAAGACCTaGGGGGAATGCCTACATCTG +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHAHEKT*GECLHL
Trigger: CAGATGTAGGCATTCCCCCCAGGTCTTTTCATGTGC...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CCA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTAAACCCAGAGACCAATaGTGCCGTTGCCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLKPRDQ*CRCLGA
Trigger: GGCACCAAGGCAACGGCACCATTGGTCTCTGGGTTT...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS-3UTR CCA 90 bp AGGCTGAGCTTCGGCAGCCACTGTGTGTGTAGCAGTGAGAGCCTTCCAGAAGAGACTTGCTTGCAACTCTaGCACAGCCTTCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: RLSFGSHCVCSSESLPEETCLQL*HSLPST
Trigger: GGTGGAAGGAAGGCTGTGCCAGAGTTGCAAGCAAGT...CTCTTCTGGAAGGCTCTCACTGCTACACACACAGTGGCTGCCGAAGCTCAGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS-3UTR TCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGAAGATCCTCCAAACATaGGGTAGAACTTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GARLSHYVATGVAPGFGKKILQT*GRTWCL
Trigger: GAGGCACCAAGTTCTACCTCATGTTTGGAGGATCTT...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGATCCTCCAAACATaGGGTAGAACTTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGKILQT*GRTWCL
Trigger: GAGGCACCAAGTTCTACCTCATGTTTGGAGGATCTT...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCAAACAACTCCACTTTTaGACGAACAGCATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSKQLHF*TNSISL
Trigger: GAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTT...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GGACGAACTTCATGGCGATACTCCGATAAACTTGCTTGCAACTCTGGCACAGCCGAACTAAAGCCAGGCTaGGCTTCGGCAGCCACTGTG +
Preference number: 4 (lower is better)
Translates to: GRTSWRYSDKLACNSGTAELKPG*ASAATV
Trigger: CACAGTGGCTGCCGAAGCTCAGCCTGGCTTTAGTTC...GGCTGTGCCAGAGTTGCAAGCAAGTTTATCGGAGTATCGCCATGAAGTTCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS-3UTR GCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCGAACTTGGTGCCTCCTaGCTCAGAGCTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARELGAS*LRASGS
Trigger: GCTTCCAGAAGCTCTGAGGCAGGAGGCACCAAGTTC...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTCCTTCTGTCGCTGGTaGATTTCTCCACCACATTTG +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHSFCRW*ISPPHL
Trigger: CAAATGTGGTGGAGAAATGCACCAGCGACAGAAGGA...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCCTTGAAATTGCTATCTaGCAGTTTCCGACTCCTTTT +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSLEIAI*QFPTPF
Trigger: AAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAG...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACGCAAGCTCTTCAAGGTaGTGTTCATGTTCTCCAACG +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHASSSR*CSCSPT
Trigger: CGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGC...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGGTTTCACTTGATGGATaGACCAAGCACAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GARLSHYVATGVAPGFGKVSLDG*TKHRGS
Trigger: TGACCCTCTGTGCTTGGTGCATCCATCAAGTGAAAC...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGTTTCACTTGATGGATaGACCAAGCACAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: CLGARLSHYVATGVAPGFVSLDG*TKHRGS
Trigger: TGACCCTCTGTGCTTGGTGCATCCATCAAGTGAAAC...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAGTTTCACTTGATGGATaGACCAAGCACAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGVSLDG*TKHRGS
Trigger: TGACCCTCTGTGCTTGGTGCATCCATCAAGTGAAAC...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAGACCCTTTTGATACCTaGTACGACAGTCGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGDPFDT*YDSRGL
Trigger: CAAACCACGACTGTCGTAGCAGGTATCAAAAGGGTC...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGACCCTTTTGATACCTaGTACGACAGTCGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: CLGARLSHYVATGVAPGFDPFDT*YDSRGL
Trigger: CAAACCACGACTGTCGTAGCAGGTATCAAAAGGGTC...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACGACCCTTTTGATACCTaGTACGACAGTCGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHDPFDT*YDSRGL
Trigger: CAAACCACGACTGTCGTAGCAGGTATCAAAAGGGTC...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCCAAAGGTTTCATCCATaGTGGACACCAGATCTAAGA +
Preference number: 4 (lower is better)
Translates to: DQWCRCLGARLSHYVATGQRFHP*WTPDLR
Trigger: TCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTG...GCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGCCTGCACTCCCTTCTTaGAACGCTTGCGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: ILKALPRDQWCRCLGARLPALPS*NACASF
Trigger: AAAAGAGGCGCAAGCGTTGCAAGAAGGGAGTGCAGG...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS-3UTR CCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGCGTTGCTCCTGGATTTaGAAAGTCCTTGTAGACCCA +
Preference number: 4 (lower is better)
Translates to: GARLSHYVATGVAPGFGKRCSWI*KVLVDP
Trigger: TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCAGGTTTCATCCATGCTaGACACCAGATCTAAGAATT +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSRFHPC*TPDLRI
Trigger: AATTCTTAGATCTGGTGTCCAGCATGGATGAAACCT...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR CAA 72 bp GCAGGGGACGAACTTCATGGCGATACTCCGATAAACTaGCTTGCAACTCTGGCACAGCCTTCCTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: AGDELHGDTPIN*LATLAQPSFHL
Trigger: CAGGTGGAAGGAAGGCTGTGCCAGAGTTGCAAGCAAGTTTATCGGAGTATCGCCATGAAGTTCGTCCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS-3UTR TCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACGAGTTCGCAAGTCCTTaGAATTGCTATCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHEFASP*NCYLPV
Trigger: AACTGGCAGATAGCAATTTCAAGGACTTGCGAACTC...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAGAGTTCGCAAGTCCTTaGAATTGCTATCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGEFASP*NCYLPV
Trigger: AACTGGCAGATAGCAATTTCAAGGACTTGCGAACTC...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCGGGCCAATATATATTTaGTTTGCTCTGGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSGPIYI*FALEFH
Trigger: ATGAAACTCCAGAGCAAATCAAATATATATTGGCCC...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGGGTCATTGAGAGATaGCCGCAGGCTAGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: ILKALPRDQWCRCLGARLRVIER*PQASFH
Trigger: GTGAAAACTAGCCTGCGGTCATCTCTCAATGACCCT...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACAATTCAAGACCCTTTTaGTACCTGCTACGACAGTCG +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHNSRPF*YLLRQS
Trigger: CGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATT...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCATAAACAGAGAATGCTaGGAGTATATCCTGAATAGG +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSINREC*EYILNR
Trigger: CCTATTCAGGATATACTCTCAGCATTCTCTGTTTAT...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCAGCAGAGAGCAGATaGCCAGGCCACCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: LALLLDLESPCRPRNYQKSAESR*PGHPAT
Trigger: GGTGGCTGGGTGGCCTGGTCATCTGCTCTCTGCTGA...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCCCATTCCCTGTGCGTTaGAGTATCTTGACGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SFLKHYPETNGAVALVPAPFPVR*SILTLW
Trigger: CCAAAGCGTCAAGATACTTCAACGCACAGGGAATGG...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTCCATTCCCTGTGCGTTaGAGTATCTTGACGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLPFPVR*SILTLW
Trigger: CCAAAGCGTCAAGATACTTCAACGCACAGGGAATGG...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCCCATGGACTATAACGTaGTTGTGTTCATTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSPWTIT*LCSFLK
Trigger: CTTTAAGAATGAACACAATCACGTTATAGTCCATGG...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCATGAAAATCTCTGCGTaGAGAATATGCTGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSMKISA*RICCRF
Trigger: AAACCTACAGCATATTCTTCACGCAGAGATTTTCAT...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGCCCGGAATAATTCCTTaGTCGTGTAAGGTTCACAGA +
Preference number: 4 (lower is better)
Translates to: GARLSHYVATGVAPGFGKPGIIP*SCKVHR
Trigger: TCTGTGAACCTTACACGAGCAAGGAATTATTCCGGG...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGATCTGCAGGTGAAGAGTaGCGTAAGTGCCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGSAGEE*RKCLYF
Trigger: AAAATAGAGGCACTTACGGCACTCTTCACCTGCAGA...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTTCTGCAGGTGAAGAGTaGCGTAAGTGCCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: CLGARLSHYVATGVAPGFSAGEE*RKCLYF
Trigger: AAAATAGAGGCACTTACGGCACTCTTCACCTGCAGA...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTCACAGGTTTGCACGATaGCACTTTCTCACTGATAGA +
Preference number: 4 (lower is better)
Translates to: CLGARLSHYVATGVAPGFHRFAR*HFLTDR
Trigger: TCTATCAGTGAGAAAGTGGCATCGTGCAAACCTGTG...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCCGGTGGCCACAGGTTTaGACGATGCCACTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTRWPQV*TMPLSH
Trigger: GTGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCG...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GATACCTGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTCCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: DTCYDSRGLALYSVRYIIPRDQW*RCLGAR
Trigger: GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGG...AATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR CCA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACGGAGAGCTGAGAGCATaGCCAGGTGCCGCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHGELRA*PGAAWG
Trigger: TCCCCACGCGGCACCTGGCCATGCTCTCAGCTCTCC...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447510.7
ENST00000505450.5
CDS-3UTR CCA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTTCTCAAAGTATCTTCTaGGAAATCACGCGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: CLGARLSHYVATGVAPGFSQSIF*EITRLY
Trigger: GTACAGCCGCGTGATTTCCCAGAAGATACTTTGAGA...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGAGCTGTGTACTTTGTTaGTGCAAGCTCTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: GARLSHYVATGVAPGFGKSCVLC*CKLFKV
Trigger: CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCT...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACGGGTTGCTATTCAGCTaGCTTAGAGACAATCTGATG +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHGLLFS*LRDNLM
Trigger: CATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCC...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp TGGCTTAGAGACAATCTGATGCTGTTGCAGGTTTCACTTGATGGATGCACCAAGAGACACAGCCTCGGGTaGTCGGGGTGGCATGCCTGT +
Preference number: 4 (lower is better)
Translates to: WLRDNLMLLQVSLDGCTKRHSLG*SGWHAC
Trigger: ACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCT...CTTGGTGCATCCATCAAGTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CAA 72 bp TCTGCATCCACGGGTGGAAGCTGCCTCAGTTCAGGGTaGCTATTCAGCTGGCTTAGAGACAATCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: SASTGGSCLSSG*LFSWLRDNLML
Trigger: CAGCATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGCAGCTTCCACCCGTGGATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCATCAAGAACAGGGATaGTGTTGGGTCTCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARHQEQG*CWVSVG
Trigger: ACCGACTGAGACCCAACATCATCCCTGTTCTTGATG...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp GACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCATAAACAGAGAATGCTaGGAGTATATCCTGAATAGG +
Preference number: 4 (lower is better)
Translates to: DQWCRCLGARLSHYVATGINREC*EYILNR
Trigger: CCTATTCAGGATATACTCTCAGCATTCTCTGTTTAT...GCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp GACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCCCATGGACTATAACGTaGTTGTGTTCATTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: DQWCRCLGARLSHYVATGPWTIT*LCSFLK
Trigger: CTTTAAGAATGAACACAATCACGTTATAGTCCATGG...GCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGGATATCCTGAGTCCTaGGAAGACCTAGTAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPGYPES*EDLVGL
Trigger: CAGCCCTACTAGGTCTTCTCAGGACTCAGGATATCC...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS-3UTR TCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAACACTGAACAGAAGTaGCCCAACTACTATCATCGT +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGNTEQK*PNYYHR
Trigger: ACGATGATAGTAGTTGGGTCACTTCTGTTCAGTGTT...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR GCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTCCTTCTGTCGCTGGTaGATTTCTCCACCACATTTG +
Preference number: 4 (lower is better)
Translates to: SFLKHYPETNGAVALVPASFCRW*ISPPHL
Trigger: CAAATGTGGTGGAGAAATGCACCAGCGACAGAAGGA...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTTTCACTTGATGGATaGACCAAGCACAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLVSLDG*TKHRGS
Trigger: TGACCCTCTGTGCTTGGTGCATCCATCAAGTGAAAC...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTCCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSPRDQW*RCLGAR
Trigger: GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGG...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGACAAAGGTTTCATCCATaGTGGACACCAGATCTAAGA +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGQRFHP*WTPDLR
Trigger: TCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTG...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGCTACGACAGTCGTaGTTTGGCGTTGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARLLRQS*FGVVLC
Trigger: ACAGAGTACAACGCCAAACCACGACTGTCGTAGCAG...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTCTCGGGTGGTCGGGGTaGCATGCCTGTCATAGCCGC +
Preference number: 4 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSALGWSG*HACHSR
Trigger: GCGGCTATGACAGGCATGCCACCCCGACCACCCGAG...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTAGACACAGCCTCGGGTaGTCGGGGTGGCATGCCTGT +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSRHSLG*SGWHAC
Trigger: ACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCT...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACGTTCCTCAAATTTCCTaGGGGCAAACTGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHVPQIS*GQTVCF
Trigger: AAAGCAAACAGTTTGCCCCCAGGAAATTTGAGGAAC...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGTTCCTCAAATTTCCTaGGGGCAAACTGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: CLGARLSHYVATGVAPGFVPQIS*GQTVCF
Trigger: AAAGCAAACAGTTTGCCCCCAGGAAATTTGAGGAAC...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp GGTCACCAGCAGGAGGCAGGGGACGAACTTCATGGCGATACTCCGATAAACTTGCACTGGCGTTGCTCCTaGATTTGGAAAGTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: GHQQEAGDELHGDTPINLHWRCS*IWKVLV
Trigger: TACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTG...CAAGTTTATCGGAGTATCGCCATGAAGTTCGTCCCCTGCCTCCTGCTGGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS-3UTR CCA 90 bp TTGATACTGTTCAGATCTGTGAACGCCTTGTCCTTGGTAGTGTTGTACTGGGCCCTACCCAGAGACCAATaGTGCCGTTGCCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LILFRSVNALSLVVLYWALPRDQ*CRCLGA
Trigger: GGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAG...GGCCCAGTACAACACTACCAAGGACAAGGCGTTCACAGATCTGAACAGTATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR CCA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACTGGCCAGGTGCCGCGTaGGGATCTGCCTCAGTCACT +
Preference number: 4 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHWPGAA*GSASVT
Trigger: AGTGACTGAGGCAGATCCCCACGCGGCACCTGGCCA...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS-3UTR TCA 90 bp CAAAAGGTATATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGCCGCGGCGGGAGAGCTaGGAGCATGGCCAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: QKVYTPFTVHKMHLSCKLPRRES*EHGQVP
Trigger: CGGCACCTGGCCATGCTCTCAGCTCTCCCGCCGCGG...CAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447510.7
ENST00000505450.5
CDS-3UTR TCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGTCTGAGGCTGGCTTaGGGCGAGGGATGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLCLRLA*GEGCGR
Trigger: TCTTCCGCATCCCTCGCCTCAAGCCAGCCTCAGACA...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCCATCAAGAACAGGGATaGTGTTGGGTCTCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTHQEQG*CWVSVG
Trigger: ACCGACTGAGACCCAACATCATCCCTGTTCTTGATG...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGTTGCAGGTTTCACTTaGTGGATGCACCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPVAGFT*WMHQAQ
Trigger: CTGTGCTTGGTGCATCCATCAAGTGAAACCTGCAAC...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCGTTGCAGGTTTCACTTaGTGGATGCACCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTVAGFT*WMHQAQ
Trigger: CTGTGCTTGGTGCATCCATCAAGTGAAACCTGCAAC...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCGGCTTAGAGACAATCTaGTGCTGTTGCAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARGLETI*CCCRFH
Trigger: GTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCC...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTAATTCAAGACCCTTTTaGTACCTGCTACGACAGTCG +
Preference number: 4 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLNSRPF*YLLRQS
Trigger: CGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATT...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCTCAGCAGAGAGCAGATaGCCAGGCCACCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: LLDLESPCRPRNYQKSVISAESR*PGHPAT
Trigger: GGTGGCTGGGTGGCCTGGTCATCTGCTCTCTGCTGA...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp GACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTAAGGGATTGATATCAGCAGAGAGCAGATaGCCAGGCCACCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: DSRGLALYSVRYIIKGLISAESR*PGHPAT
Trigger: GGTGGCTGGGTGGCCTGGTCATCTGCTCTCTGCTGA...TATCAATCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGCGTTGAAGTATCTTaGCGCTTTGGTATAGAGTGC +
Preference number: 4 (lower is better)
Translates to: SFLKHYPETNGAVALVPACVEVS*RFGIEC
Trigger: GCACTCTATACCAAAGCGTCAAGATACTTCAACGCA...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCACCATTCCCTGTGCGTTaGAGTATCTTGACGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPPFPVR*SILTLW
Trigger: CCAAAGCGTCAAGATACTTCAACGCACAGGGAATGG...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTTTGTGATGAAGTTCTaGGCAAAATCCAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHFVMKF*AKSREA
Trigger: AGCTTCTCTGGATTTTGCTCAGAACTTCATCACAAA...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LLDLESPCRPRNYQKSVIALVPA*VTTLPL
Trigger: CAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGC...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GCTCTTCAAGGTGCTGTTCATGTTCTCCAACGCCTCTTTGGTCTCCTTGATCGCTCTGTGGATGAAGGCTaGCCTCCTGAAAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: ALQGAVHVLQRLFGLLDRSVDEG*PPEKEF
Trigger: GAACTCCTTTTCAGGAGGGCAGCCTTCATCCACAGA...GCGATCAAGGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTTGAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR GCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACCTAGTTCAAAGAGAATaGCAATGGGTCCAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHLVQRE*QWVQLY
Trigger: ATAAAGCTGGACCCATTGGCATTCTCTTTGAACTAG...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTCTAGTTCAAAGAGAATaGCAATGGGTCCAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: CLGARLSHYVATGVAPGFLVQRE*QWVQLY
Trigger: ATAAAGCTGGACCCATTGGCATTCTCTTTGAACTAG...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTCACCAACAGGGAGATTaGAAAGCATTTCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLHQQGD*KAFPQE
Trigger: TTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTG...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGCACCAACAGGGAGATTaGAAAGCATTTCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: ILKALPRDQWCRCLGARLHQQGD*KAFPQE
Trigger: TTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTG...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCCTCCTTGATCGCTGTTaGCATGGACTTAATCTCATC +
Preference number: 4 (lower is better)
Translates to: SFLKHYPETNGAVALVPALLDRC*HGLNLI
Trigger: GATGAGATTAAGTCCATGGCAACAGCGATCAAGGAG...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGCCTCAGTTCAGGGTTaGTATTCAGCTGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPASVQG*YSAGLE
Trigger: CTCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGC...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GCTCTTCAAGGTGCTGTTCATGTTCTCCAACGCCTCTTTGGTCTCCTTGATCGCGCCTCAGTTCAGGGTTaGTATTCAGCTGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: ALQGAVHVLQRLFGLLDRASVQG*YSAGLE
Trigger: CTCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGC...GCGATCAAGGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTTGAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCGGTGGCCACAGGTTTaGACGATGCCACTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: LCSFLKHYPETNGAVALVRWPQV*TMPLSH
Trigger: GTGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCG...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp AGTTTTCACGCTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTCGGTGGCCACAGGTTTaGACGATGCCACTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SFHAGQTAAKLCTLLVQARWPQV*TMPLSH
Trigger: GTGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCG...AGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAGCGTGAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR GCA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAACCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: WSYAGFSMIAFACHFQVEPRDQW*RCLGAR
Trigger: GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGG...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGAGCTTCTGGAAGCCTTaGGGAAGGCAAGCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LCSFLKHYPETNGAVALVSFWKP*GRQACS
Trigger: GGAACACGCTTGCCTTCCCCAAGGCTTCCAGAAGCT...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGCAAAGAGAATGCCAATaGGTCCAGCTTTATGGGAGT +
Preference number: 4 (lower is better)
Translates to: ILKALPRDQWCRCLGARLQRECQ*VQLYGS
Trigger: ACTCCCATAAAGCTGGACCCATTGGCATTCTCTTTG...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGCTGTGTACTTTGTTaGTGCAAGCTCTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: ILKALPRDQWCRCLGARLSCVLC*CKLFKV
Trigger: CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCT...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTAGCTGTGTACTTTGTTaGTGCAAGCTCTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLSCVLC*CKLFKV
Trigger: CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCT...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCACGACAGTCGTGGTTTaGCGTTGTACTCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTTTVVV*RCTLSG
Trigger: ACCTGACAGAGTACAACGCCAAACCACGACTGTCGT...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp TTGTCGATATCTGAACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACACTCGGGTGGTCGGGGTaGCATGCCTGTCATAGCCGC +
Preference number: 4 (lower is better)
Translates to: LSISEPMEFKTLLIPATTLGWSG*HACHSR
Trigger: GCGGCTATGACAGGCATGCCACCCCGACCACCCGAG...TGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGATATCGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CCA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGCTCGGGTGGTCGGGGTaGCATGCCTGTCATAGCCGC +
Preference number: 4 (lower is better)
Translates to: MDYNVIVFILKALPRDQWLGWSG*HACHSR
Trigger: GCGGCTATGACAGGCATGCCACCCCGACCACCCGAG...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTAGACACAGCCTCGGGTaGTCGGGGTGGCATGCCTGT +
Preference number: 4 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIRHSLG*SGWHAC
Trigger: ACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCT...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCAGACGCCTCCGGTGTTaGAGACACAGCCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLDLESPCRPRNYQKSVIRRLRC*RHSLGW
Trigger: CCACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCT...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCGTTGCTCCTGGATTTaGAAAGTCCTTGTAGACCCA +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARRCSWI*KVLVDP
Trigger: TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCACTGGCGTTGCTCCTaGATTTGGAAAGTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARHWRCS*IWKVLV
Trigger: TACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTG...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp GACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCTTTCCAAGTGGAACATaGCCAATCTTTGATAAAGTA +
Preference number: 4 (lower is better)
Translates to: DQWCRCLGARLSHYVATGFPSGT*PIFDKV
Trigger: TACTTTATCAAAGATTGGCCATGTTCCACTTGGAAA...GCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAGGTTTCATCCATGCTaGACACCAGATCTAAGAATT +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGRFHPC*TPDLRI
Trigger: AATTCTTAGATCTGGTGTCCAGCATGGATGAAACCT...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR CAA 72 bp GTTTCACTTGATGGATGCACCAAGCACAGAGGGTCATaGAGAGATGACCGCAGGCTAGTTTTCACGCTGGTC +
Preference number: 4 (lower is better)
Translates to: VSLDGCTKHRGS*RDDRRLVFTLV
Trigger: GACCAGCGTGAAAACTAGCCTGCGGTCATCTCTCAATGACCCTCTGTGCTTGGTGCATCCATCAAGTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACATGTCTGAGGCTGGCTTaGGGCGAGGGATGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTCLRLA*GEGCGR
Trigger: TCTTCCGCATCCCTCGCCTCAAGCCAGCCTCAGACA...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp AAAGCATTTCCTCAGGAAGGGCCCATTTTCCTTCTGTCGCTGGTGCATTTCTCCGTTTCCGACTCCTTTTaGTCCGGGTTCTTACCTGGT +
Preference number: 4 (lower is better)
Translates to: KAFPQEGPIFLLSLVHFSVSDSF*SGFLPG
Trigger: ACCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAAC...GGAGAAATGCACCAGCGACAGAAGGAAAATGGGCCCTTCCTGAGGAAATGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAGGGCCAATATATATTTaGTTTGCTCTGGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGGPIYI*FALEFH
Trigger: ATGAAACTCCAGAGCAAATCAAATATATATTGGCCC...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACGGGCCAATATATATTTaGTTTGCTCTGGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHGPIYI*FALEFH
Trigger: ATGAAACTCCAGAGCAAATCAAATATATATTGGCCC...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACATTGTCGATATCTaGACCAATGGAATTCAAGAC +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHYIVDI*TNGIQD
Trigger: GTCTTGAATTCCATTGGTTCAGATATCGACAATGTA...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCACCCAGCCACCAGTATaGATCATACTCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARTQPPV*IILFQC
Trigger: ACATTGGAAGAGTATGATTCATACTGGTGGCTGGGT...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTCAGCAGAGAGCAGATaGCCAGGCCACCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: MDYNVIVFILKALPRDQWSAESR*PGHPAT
Trigger: GGTGGCTGGGTGGCCTGGTCATCTGCTCTCTGCTGA...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TTGTCGATATCTGAACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACAGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LSISEPMEFKTLLIPATTALVPA*VTTLPL
Trigger: CAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGC...TGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGATATCGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR TCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCACGCAGGTTTCTCTATaGTTGCTTTTGCATGCCATT +
Preference number: 4 (lower is better)
Translates to: SFLKHYPETNGAVALVPATQVSL*LLLHAI
Trigger: AATGGCATGCAAAAGCAATCATAGAGAAACCTGCGT...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGATCTCTCTCTCTCTTTTaGATTTGTCAGATGGAGTTA +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGSLSLF*ICQMEL
Trigger: TAACTCCATCTGACAAATTCAAAAGAGAGAGAGAGA...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAAGCCCTGGACGCACTCTaGTTGGACCGGCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: STFERTAFLSQDLSLSFEALDAL*LDRLSC
Trigger: GCAGCTCAGCCGGTCCAATCAGAGTGCGTCCAGGGC...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS-3UTR GCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCTTACCTGGTGATTTaGCACAAAACCATAGAAGAT +
Preference number: 4 (lower is better)
Translates to: GARLSHYVATGVAPGFGKSYLVI*HKTIED
Trigger: ATCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGA...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGATCTTACCTGGTGATTTaGCACAAAACCATAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGSYLVI*HKTIED
Trigger: ATCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGA...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCGACCCTTTTGATACCTaGTACGACAGTCGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTDPFDT*YDSRGL
Trigger: CAAACCACGACTGTCGTAGCAGGTATCAAAAGGGTC...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCTCTGCAGGTGAAGAGTaGCGTAAGTGCCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARSAGEE*RKCLYF
Trigger: AAAATAGAGGCACTTACGGCACTCTTCACCTGCAGA...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQPRDQW*RCLGAR
Trigger: GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGG...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGATGATTGCTTTTGCATaGCATTTCCAAGTGGAACAT +
Preference number: 4 (lower is better)
Translates to: GARLSHYVATGVAPGFGKMIAFA*HFQVEH
Trigger: ATGTTCCACTTGGAAATGGCATGCAAAAGCAATCAT...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTTCCTGTAGAGGTGCCTaGTCAACCCCCTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: VCSAHSTHGNMLESSHHISCRGA*STPCTP
Trigger: GGGAGTGCAGGGGGTTGAGCAGGCACCTCTACAGGA...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS-3UTR CCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCGGGTTGCTATTCAGCTaGCTTAGAGACAATCTGATG +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARGLLFS*LRDNLM
Trigger: CATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCC...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATTCTGCATCCACGGGTaGAAGCTGCCTCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LALLLDLESPCRPRNYQKFCIHG*KLPQFR
Trigger: CCTGAACTGAGGCAGCTTCCACCCGTGGATGCAGAA...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp ACCCTTTTGATACCTGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTCTGCTACGACAGTCGTaGTTTGGCGTTGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: TLLIPATTVVVWRCTLSGLLRQS*FGVVLC
Trigger: ACAGAGTACAACGCCAAACCACGACTGTCGTAGCAG...ACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATCAAAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CCA 90 bp CTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGCTGCTACGACAGTCGTaGTTTGGCGTTGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: LVRLLLSCVLCWCKLFKVLLRQS*FGVVLC
Trigger: ACAGAGTACAACGCCAAACCACGACTGTCGTAGCAG...CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CCA 90 bp CCGATAAACTTGCTTGCAACTCTGGCACAGCCTTCCTTCCACCTGGATATCCTGCGTTGCTCCTGGATTTaGAAAGTCCTTGTAGACCCA +
Preference number: 4 (lower is better)
Translates to: PINLLATLAQPSFHLDILRCSWI*KVLVDP
Trigger: TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG...CAGGATATCCAGGTGGAAGGAAGGCTGTGCCAGAGTTGCAAGCAAGTTTATCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS-3UTR CCA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCCGTTGCTCCTGGATTTaGAAAGTCCTTGTAGACCCA +
Preference number: 4 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTRCSWI*KVLVDP
Trigger: TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCCACTGGCGTTGCTCCTaGATTTGGAAAGTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTHWRCS*IWKVLV
Trigger: TACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTG...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCACACTGGCGTTGCTCCTaGATTTGGAAAGTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPHWRCS*IWKVLV
Trigger: TACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTG...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGCTACCCAGAGACCAATaGTGCCGTTGCCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLLPRDQ*CRCLGA
Trigger: GGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAG...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR CAA 72 bp GCCATGGACTTAATCTCATCAAGAACAGGGATGATGTaGGGTCTCAGTCGGTCAAGAATTCCGCCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: AMDLISSRTGMM*GLSRSRIPPPS
Trigger: GCTAGGAGGCGGAATTCTTGACCGACTGAGACCCAACATCATCCCTGTTCTTGATGAGATTAAGTCCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CAA 72 bp CACGCTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTaGGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: HAGQTAAKLCTL*VQALQGAVHVL
Trigger: GAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CAA 72 bp ACATCAACAGCAGTATCTAGAGCGGTGGCCACAGGTTaGCACGATGCCACTTTCTCACTGATAGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: TSTAVSRAVATG*HDATFSLIENS
Trigger: CGAGTTCTCTATCAGTGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCGCTCTAGATACTGCTGTTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR TCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTCTTCAGTTTTCTGTCTaGGGCTGGCTTGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSLQFSV*GWLEAR
Trigger: CCTCGCCTCAAGCCAGCCTCAGACAGAAAACTGAAG...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp AAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCCAACTTCAGTTTTCTGTCTaGGGCTGGCTTGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: KLCTLLVQALQGAVHVLQLQFSV*GWLEAR
Trigger: CCTCGCCTCAAGCCAGCCTCAGACAGAAAACTGAAG...TTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR TCA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACCTTCAGTTTTCTGTCTaGGGCTGGCTTGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHLQFSV*GWLEAR
Trigger: CCTCGCCTCAAGCCAGCCTCAGACAGAAAACTGAAG...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGAGGGTCATTGAGAGATaGCCGCAGGCTAGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: LCSFLKHYPETNGAVALVRVIER*PQASFH
Trigger: GTGAAAACTAGCCTGCGGTCATCTCTCAATGACCCT...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGGTTGCAGGTTTCACTTaGTGGATGCACCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: LCSFLKHYPETNGAVALVVAGFT*WMHQAQ
Trigger: CTGTGCTTGGTGCATCCATCAAGTGAAACCTGCAAC...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTATCCAACTCCAACCATaGGGAAGACGCCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSIQLQP*GRRLRC
Trigger: ACACCGGAGGCGTCTTCCTCATGGTTGGAGTTGGAT...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCATGCGTTGAAGTATCTTaGCGCTTTGGTATAGAGTGC +
Preference number: 4 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPCVEVS*RFGIEC
Trigger: GCACTCTATACCAAAGCGTCAAGATACTTCAACGCA...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAAACAACTCCACTTTTaGACGAACAGCATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ILKALPRDQWCRCLGARLKQLHF*TNSISL
Trigger: GAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTT...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGGAACTTGGTGCCTCCTaGCTCAGAGCTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLELGAS*LRASGS
Trigger: GCTTCCAGAAGCTCTGAGGCAGGAGGCACCAAGTTC...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAGGTCTCATAATTTGTTaGAGGCAATTCATAATTCCA +
Preference number: 4 (lower is better)
Translates to: LGARLSHYVATGVAPGFGGLIIC*RQFIIP
Trigger: TGGAATTATGAATTGCCTGCAACAAATTATGAGACC...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCCTAGTTCAAAGAGAATaGCAATGGGTCCAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: SFLKHYPETNGAVALVPALVQRE*QWVQLY
Trigger: ATAAAGCTGGACCCATTGGCATTCTCTTTGAACTAG...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCACACCAACAGGGAGATTaGAAAGCATTTCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPHQQGD*KAFPQE
Trigger: TTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTG...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp AGTTTTCACGCTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTAACGTTGTCAAGTTCTaGATCCACGGGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SFHAGQTAAKLCTLLVQANVVKF*IHGWKL
Trigger: CAGCTTCCACCCGTGGATGCAGAACTTGACAACGTT...AGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAGCGTGAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCACCCGGAATAATTCCTTaGTCGTGTAAGGTTCACAGA +
Preference number: 4 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPPGIIP*SCKVHR
Trigger: TCTGTGAACCTTACACGAGCAAGGAATTATTCCGGG...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGCTTATGCTTCCAGTATaGTCATTAATGTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: GARLSHYVATGVAPGFGKLMLPV*SLMLRC
Trigger: ACATCTCAACATTAATGAGCATACTGGAAGCATAAG...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACCTTATGCTTCCAGTATaGTCATTAATGTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: KALPRDQWCRCLGARLSHLMLPV*SLMLRC
Trigger: ACATCTCAACATTAATGAGCATACTGGAAGCATAAG...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGACTTTCCAATTCACTaGTTATGCTTCCAGTATGCT +
Preference number: 4 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLDFPIH*LCFQYA
Trigger: AGCATACTGGAAGCATAAGCAGTGAATTGGAAAGTC...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCAAAGGTTTCATCCATaGTGGACACCAGATCTAAGA +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARQRFHP*WTPDLR
Trigger: TCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTG...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGCAAATGAATCAGAACTaGAATCTGCACATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: GARLSHYVATGVAPGFGKQMNQN*NLHMKR
Trigger: TCTTTTCATGTGCAGATTGCAGTTCTGATTCATTTG...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
CDS-3UTR GCA 90 bp CAACAGGGAGATTGCAAAGCATTTCCTCAGGAAGGGCCCATTTTCCTTCTGTCGCAGCTCTCATTTGGCTaGAGGGTCTTAAATGAGCAG +
Preference number: 4 (lower is better)
Translates to: QQGDCKAFPQEGPIFLLSQLSFG*RVLNEQ
Trigger: CTGCTCATTTAAGACCCTGCAGCCAAATGAGAGCTG...CGACAGAAGGAAAATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS-3UTR CCA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACAGGCAAGCGTGTTCCTaGGCAGAAGAGGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHRQACS*AEEEQE
Trigger: TTCCTGCTCCTCTTCTGCCCAGGAACACGCTTGCCT...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCACAAAGAGAATGCCAATaGGTCCAGCTTTATGGGAGT +
Preference number: 4 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPQRECQ*VQLYGS
Trigger: ACTCCCATAAAGCTGGACCCATTGGCATTCTCTTTG...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAGCTGTGTACTTTGTTaGTGCAAGCTCTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTSCVLC*CKLFKV
Trigger: CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCT...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTTCTGCATCCACGGGTaGAAGCTGCCTCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLFCIHG*KLPQFR
Trigger: CCTGAACTGAGGCAGCTTCCACCCGTGGATGCAGAA...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CCACCCAGCCACCAGTATGAATCATACTCTTCCAATGTAGGTAAATTTCTGTGGTTCTGCATCCACGGGTaGAAGCTGCCTCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PPSHQYESYSSNVGKFLWFCIHG*KLPQFR
Trigger: CCTGAACTGAGGCAGCTTCCACCCGTGGATGCAGAA...CCACAGAAATTTACCTACATTGGAAGAGTATGATTCATACTGGTGGCTGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CCA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGACGACAGTCGTGGTTTaGCGTTGTACTCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LCSFLKHYPETNGAVALVTTVVV*RCTLSG
Trigger: ACCTGACAGAGTACAACGCCAAACCACGACTGTCGT...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGCTCGGGTGGTCGGGGTaGCATGCCTGTCATAGCCGC +
Preference number: 4 (lower is better)
Translates to: RTLDTSLMILMLAALQLMLGWSG*HACHSR
Trigger: GCGGCTATGACAGGCATGCCACCCCGACCACCCGAG...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAAAGACGCCTCCGGTGTTaGAGACACAGCCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: STFERTAFLSQDLSLSFERRLRC*RHSLGW
Trigger: CCACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCT...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TTGTACTCTGTCAGGTATATCATTAAGGGATTGATAGCCCTGTTGGACCAGGCCCAGTATCTAGAGCGGTaGCCACAGGTTTGCACGATG +
Preference number: 4 (lower is better)
Translates to: LYSVRYIIKGLIALLDQAQYLER*PQVCTM
Trigger: CATCGTGCAAACCTGTGGCCACCGCTCTAGATACTG...GGCCTGGTCCAACAGGGCTATCAATCCCTTAATGATATACCTGACAGAGTACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR CCA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAACTACCCAGAGACCAATaGTGCCGTTGCCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: WSYAGFSMIAFACHFQVELPRDQ*CRCLGA
Trigger: GGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAG...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCATCTTTCCTGTAAACTaGTGTGTGTTCAGCACACTC +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARIFPVN*CVFSTL
Trigger: GAGTGTGCTGAACACACACCAGTTTACAGGAAAGAT...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR CAA 72 bp CTCTTCAAGGTGCTGTTCATGTTCTCCAACGCCTCTTaGGTCTCCTTGATCGCTGTTGCCATGGACTTAATC +
Preference number: 4 (lower is better)
Translates to: LFKVLFMFSNAS*VSLIAVAMDLI
Trigger: GATTAAGTCCATGGCAACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTTGAAGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CAA 72 bp AGGCCATCCAAATCTGTCCTAAGAACGTTATTAACGTaGTCAAGTTCTGCATCCACGGGTGGAAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RPSKSVLRTLLT*SSSASTGGSCL
Trigger: GAGGCAGCTTCCACCCGTGGATGCAGAACTTGACAACGTTAATAACGTTCTTAGGACAGATTTGGATGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTGTCTGAGGCTGGCTTaGGGCGAGGGATGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKICLRLA*GEGCGR
Trigger: TCTTCCGCATCCCTCGCCTCAAGCCAGCCTCAGACA...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp AAATCACCAACAGGGAGATTGCAAAGCATTTCCTCAGGAAGGGCCCATTTTCCTCATCAAGAACAGGGATaGTGTTGGGTCTCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: KSPTGRLQSISSGRAHFPHQEQG*CWVSVG
Trigger: ACCGACTGAGACCCAACATCATCCCTGTTCTTGATG...AGGAAAATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGGGCTTAGAGACAATCTaGTGCTGTTGCAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: LCSFLKHYPETNGAVALVGLETI*CCCRFH
Trigger: GTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCC...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTTCAGCAGAGAGCAGATaGCCAGGCCACCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSSAESR*PGHPAT
Trigger: GGTGGCTGGGTGGCCTGGTCATCTGCTCTCTGCTGA...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTCAGCAGAGAGCAGATaGCCAGGCCACCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: RTLDTSLMILMLAALQLMSAESR*PGHPAT
Trigger: GGTGGCTGGGTGGCCTGGTCATCTGCTCTCTGCTGA...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTATCCAACTCCAACCATaGGGAAGACGCCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIIQLQP*GRRLRC
Trigger: ACACCGGAGGCGTCTTCCTCATGGTTGGAGTTGGAT...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: RTLDTSLMILMLAALQLMALVPA*VTTLPL
Trigger: CAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGC...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTCCATGGACTATAACGTaGTTGTGTTCATTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLPWTIT*LCSFLK
Trigger: CTTTAAGAATGAACACAATCACGTTATAGTCCATGG...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCCCATGGACTATAACGTaGTTGTGTTCATTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: SFLKHYPETNGAVALVPAPWTIT*LCSFLK
Trigger: CTTTAAGAATGAACACAATCACGTTATAGTCCATGG...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGTCTCTCTCTCTCTTTTaGATTTGTCAGATGGAGTTA +
Preference number: 4 (lower is better)
Translates to: ILKALPRDQWCRCLGARLSLSLF*ICQMEL
Trigger: TAACTCCATCTGACAAATTCAAAAGAGAGAGAGAGA...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCCACCTGGATATCCTaGGTCCTGAGAAGACCTAGT +
Preference number: 4 (lower is better)
Translates to: LALLLDLESPCRPRNYQKSTWIS*VLRRPS
Trigger: ACTAGGTCTTCTCAGGACTCAGGATATCCAGGTGGA...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS-3UTR GCA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAGAACTTGGTGCCTCCTaGCTCAGAGCTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPELGAS*LRASGS
Trigger: GCTTCCAGAAGCTCTGAGGCAGGAGGCACCAAGTTC...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGTCCTTCTGTCGCTGGTaGATTTCTCCACCACATTTG +
Preference number: 4 (lower is better)
Translates to: LCSFLKHYPETNGAVALVSFCRW*ISPPHL
Trigger: CAAATGTGGTGGAGAAATGCACCAGCGACAGAAGGA...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp AAAGCATTTCCTCAGGAAGGGCCCATTTTCCTTCTGTCGCTGGTGCATTTCTCCCACCAACAGGGAGATTaGAAAGCATTTCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KAFPQEGPIFLLSLVHFSHQQGD*KAFPQE
Trigger: TTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTG...GGAGAAATGCACCAGCGACAGAAGGAAAATGGGCCCTTCCTGAGGAAATGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp CTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGCACCAACAGGGAGATTaGAAAGCATTTCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LVRLLLSCVLCWCKLFKVHQQGD*KAFPQE
Trigger: TTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTG...CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTTGAAATTGCTATCTaGCAGTTTCCGACTCCTTTT +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARLEIAI*QFPTPF
Trigger: AAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAG...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp AAAGCATTTCCTCAGGAAGGGCCCATTTTCCTTCTGTCGCTGGTGCATTTCTCCCTCCTTGATCGCTGTTaGCATGGACTTAATCTCATC +
Preference number: 4 (lower is better)
Translates to: KAFPQEGPIFLLSLVHFSLLDRC*HGLNLI
Trigger: GATGAGATTAAGTCCATGGCAACAGCGATCAAGGAG...GGAGAAATGCACCAGCGACAGAAGGAAAATGGGCCCTTCCTGAGGAAATGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTCGGTGGCCACAGGTTTaGACGATGCCACTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIRWPQV*TMPLSH
Trigger: GTGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCG...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCATGATTGCTTTTGCATaGCATTTCCAAGTGGAACAT +
Preference number: 4 (lower is better)
Translates to: SFLKHYPETNGAVALVPAMIAFA*HFQVEH
Trigger: ATGTTCCACTTGGAAATGGCATGCAAAAGCAATCAT...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGTACCTTGTGCTTTCATaGAAATTTAGGGACCAAACT +
Preference number: 4 (lower is better)
Translates to: ILKALPRDQWCRCLGARLYLVLS*KFRDQT
Trigger: AGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTA...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR GCA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTTACCTTGTGCTTTCATaGAAATTTAGGGACCAAACT +
Preference number: 4 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLYLVLS*KFRDQT
Trigger: AGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTA...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CCA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAAAGCTTCTGGAAGCCTTaGGGAAGGCAAGCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: WSYAGFSMIAFACHFQVESFWKP*GRQACS
Trigger: GGAACACGCTTGCCTTCCCCAAGGCTTCCAGAAGCT...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACAAGCTTCTGGAAGCCTTaGGGAAGGCAAGCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTSFWKP*GRQACS
Trigger: GGAACACGCTTGCCTTCCCCAAGGCTTCCAGAAGCT...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CCA 90 bp ACCCTTTTGATACCTGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTCAAAGAGAATGCCAATaGGTCCAGCTTTATGGGAGT +
Preference number: 4 (lower is better)
Translates to: TLLIPATTVVVWRCTLSGQRECQ*VQLYGS
Trigger: ACTCCCATAAAGCTGGACCCATTGGCATTCTCTTTG...ACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATCAAAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CCA 90 bp CTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGAGCTGTGTACTTTGTTaGTGCAAGCTCTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LVRLLLSCVLCWCKLFKVSCVLC*CKLFKV
Trigger: CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCT...CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CCA 90 bp TTGCTCTGGAGTTTCATTCAAGAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCTTCTGCATCCACGGGTaGAAGCTGCCTCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LLWSFIQESSQVLEIAICFCIHG*KLPQFR
Trigger: CCTGAACTGAGGCAGCTTCCACCCGTGGATGCAGAA...GCAGATAGCAATTTCAAGGACTTGCGAACTCTCTTGAATGAAACTCCAGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CCA 90 bp CTTAGAGACAATCTGATGCTGTTGCAGGTTTCACTTGATGGATGCACCAAGCACACGACAGTCGTGGTTTaGCGTTGTACTCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LRDNLMLLQVSLDGCTKHTTVVV*RCTLSG
Trigger: ACCTGACAGAGTACAACGCCAAACCACGACTGTCGT...GTGCTTGGTGCATCCATCAAGTGAAACCTGCAACAGCATCAGATTGTCTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CCA 90 bp CTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGCTCGGGTGGTCGGGGTaGCATGCCTGTCATAGCCGC +
Preference number: 4 (lower is better)
Translates to: LQLMFIVMQQKTLLNCTPLGWSG*HACHSR
Trigger: GCGGCTATGACAGGCATGCCACCCCGACCACCCGAG...CGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGAGACACAGCCTCGGGTaGTCGGGGTGGCATGCCTGT +
Preference number: 4 (lower is better)
Translates to: RTLDTSLMILMLAALQLMRHSLG*SGWHAC
Trigger: ACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCT...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGTTCCTCAAATTTCCTaGGGGCAAACTGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPVPQIS*GQTVCF
Trigger: AAAGCAAACAGTTTGCCCCCAGGAAATTTGAGGAAC...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGCAGTATCTAGAGCGGTaGCCACAGGTTTGCACGATG +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLQYLER*PQVCTM
Trigger: CATCGTGCAAACCTGTGGCCACCGCTCTAGATACTG...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTACCCAGAGACCAATaGTGCCGTTGCCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTLPRDQ*CRCLGA
Trigger: GGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAG...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGCTACCCAGAGACCAATaGTGCCGTTGCCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: MDYNVIVFILKALPRDQWLPRDQ*CRCLGA
Trigger: GGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAG...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CTTAGAGACAATCTGATGCTGTTGCAGGTTTCACTTGATGGATGCACCAAGCACCCCTTGTCCTCTTTCTaGCTTCGTTATCCTACCAGC +
Preference number: 4 (lower is better)
Translates to: LRDNLMLLQVSLDGCTKHPLSSF*LRYPTS
Trigger: GCTGGTAGGATAACGAAGCCAGAAAGAGGACAAGGG...GTGCTTGGTGCATCCATCAAGTGAAACCTGCAACAGCATCAGATTGTCTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS-3UTR TCA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGCTTCAGTTTTCTGTCTaGGGCTGGCTTGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: MDYNVIVFILKALPRDQWLQFSV*GWLEAR
Trigger: CCTCGCCTCAAGCCAGCCTCAGACAGAAAACTGAAG...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp AAGAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCCAGTTTCCGACTCCTTTTGGTTTCCGACTCCTTTTaGTCCGGGTTCTTACCTGGT +
Preference number: 4 (lower is better)
Translates to: KRVRKSLKLLSASFRLLLVSDSF*SGFLPG
Trigger: ACCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAAC...CAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp TTGATACTGTTCAGATCTGTGAACGCCTTGTCCTTGGTAGTGTTGTACTGGGCCGAGTTCGCAAGTCCTTaGAATTGCTATCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LILFRSVNALSLVVLYWAEFASP*NCYLPV
Trigger: AACTGGCAGATAGCAATTTCAAGGACTTGCGAACTC...GGCCCAGTACAACACTACCAAGGACAAGGCGTTCACAGATCTGAACAGTATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTCATCAAGAACAGGGATaGTGTTGGGTCTCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSHQEQG*CWVSVG
Trigger: ACCGACTGAGACCCAACATCATCCCTGTTCTTGATG...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp ATCTGTCCTAAGAACGTTATTAACGTTGTCAAGTTCTGCATCCACGGGTGGAAGGTTGCAGGTTTCACTTaGTGGATGCACCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: ICPKNVINVVKFCIHGWKVAGFT*WMHQAQ
Trigger: CTGTGCTTGGTGCATCCATCAAGTGAAACCTGCAAC...CTTCCACCCGTGGATGCAGAACTTGACAACGTTAATAACGTTCTTAGGACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp CCACCCAGCCACCAGTATGAATCATACTCTTCCAATGTAGGTAAATTTCTGTGGGTTGCAGGTTTCACTTaGTGGATGCACCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: PPSHQYESYSSNVGKFLWVAGFT*WMHQAQ
Trigger: CTGTGCTTGGTGCATCCATCAAGTGAAACCTGCAAC...CCACAGAAATTTACCTACATTGGAAGAGTATGATTCATACTGGTGGCTGGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp AAATCACCAACAGGGAGATTGCAAAGCATTTCCTCAGGAAGGGCCCATTTTCCTGGCTTAGAGACAATCTaGTGCTGTTGCAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: KSPTGRLQSISSGRAHFPGLETI*CCCRFH
Trigger: GTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCC...AGGAAAATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGACCCAGCCACCAGTATaGATCATACTCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: LCSFLKHYPETNGAVALVTQPPV*IILFQC
Trigger: ACATTGGAAGAGTATGATTCATACTGGTGGCTGGGT...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCTCAGCAGAGAGCAGATaGCCAGGCCACCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: NVYRNATENSVKLYTVIGSAESR*PGHPAT
Trigger: GGTGGCTGGGTGGCCTGGTCATCTGCTCTCTGCTGA...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACAATCCAACTCCAACCATaGGGAAGACGCCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTIQLQP*GRRLRC
Trigger: ACACCGGAGGCGTCTTCCTCATGGTTGGAGTTGGAT...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTCCATTCCCTGTGCGTTaGAGTATCTTGACGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSPFPVR*SILTLW
Trigger: CCAAAGCGTCAAGATACTTCAACGCACAGGGAATGG...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCTTTGTGATGAAGTTCTaGGCAAAATCCAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTFVMKF*AKSREA
Trigger: AGCTTCTCTGGATTTTGCTCAGAACTTCATCACAAA...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCAGCTATCAATGTTGTaGTGGGCTTGTCATAACAGG +
Preference number: 4 (lower is better)
Translates to: LCSFLKHYPETNGAVALVQLSML*WACHNR
Trigger: CCTGTTATGACAAGCCCATCACAACATTGATAGCTG...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp ACAGAAGTGACCCAACTACTATCATCGTACACGTCCTCCGAATCCATTCGACGACAGCTATCAATGTTGTaGTGGGCTTGTCATAACAGG +
Preference number: 4 (lower is better)
Translates to: TEVTQLLSSYTSSESIRRQLSML*WACHNR
Trigger: CCTGTTATGACAAGCCCATCACAACATTGATAGCTG...TCGTCGAATGGATTCGGAGGACGTGTACGATGATAGTAGTTGGGTCACTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR TCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFALVPA*VTTLPL
Trigger: CAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGC...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ATATTTACCTTGTGCTTTCATGCAAATTTAGGGACCAAACTCAAAGGTTTCATCGCCTTGGTGCCCGCCTaGGTCACTACGTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: IFTLCFHANLGTKLKGFIALVPA*VTTLPL
Trigger: CAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGC...GATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTAAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACGGAGGGAGTCATCCTTaGATAGTGATGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHGGSHP*IVMDHG
Trigger: TCCATGGTCCATCACTATTCAAGGATGACTCCCTCC...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCCAGTTCTTCATTGCTaGTCACTTTTGATAATGACA +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARPVLHC*SLLIMT
Trigger: TGTCATTATCAAAAGTGATCAGCAATGAAGAACTGG...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp TTATACAAATCACCAACAGGGAGATTGCAAAGCATTTCCTCAGGAAGGGCCCATGGATCACTTGTGTGCTaGGATAACCTCCCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LYKSPTGRLQSISSGRAHGSLVC*DNLPGK
Trigger: TTTGCCTGGGAGGTTATCTCAGCACACAAGTGATCC...ATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTTGTATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS-3UTR GCA 90 bp GCTCTTCAAGGTGCTGTTCATGTTCTCCAACGCCTCTTTGGTCTCCTTGATCGCCTAGTTCAAAGAGAATaGCAATGGGTCCAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: ALQGAVHVLQRLFGLLDRLVQRE*QWVQLY
Trigger: ATAAAGCTGGACCCATTGGCATTCTCTTTGAACTAG...GCGATCAAGGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTTGAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCCTAGTTCAAAGAGAATaGCAATGGGTCCAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTLVQRE*QWVQLY
Trigger: ATAAAGCTGGACCCATTGGCATTCTCTTTGAACTAG...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTAAGGGATCCTTCTGTCGCTGGTaGATTTCTCCACCACATTTG +
Preference number: 4 (lower is better)
Translates to: CYDSRGLALYSVRYIIKGSFCRW*ISPPHL
Trigger: CAAATGTGGTGGAGAAATGCACCAGCGACAGAAGGA...TCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCACCAACAGGGAGATTaGAAAGCATTTCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LCSFLKHYPETNGAVALVHQQGD*KAFPQE
Trigger: TTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTG...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TTGTACTCTGTCAGGTATATCATTAAGGGATTGATAGCCCTGTTGGACCAGGCCGTTTCACTTGATGGATaGACCAAGCACAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LYSVRYIIKGLIALLDQAVSLDG*TKHRGS
Trigger: TGACCCTCTGTGCTTGGTGCATCCATCAAGTGAAAC...GGCCTGGTCCAACAGGGCTATCAATCCCTTAATGATATACCTGACAGAGTACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGGCCTCAGTTCAGGGTTaGTATTCAGCTGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLASVQG*YSAGLE
Trigger: CTCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGC...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp AAGAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCCAGTTTCCGACTCCTTTTGAACGTTGTCAAGTTCTaGATCCACGGGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: KRVRKSLKLLSASFRLLLNVVKF*IHGWKL
Trigger: CAGCTTCCACCCGTGGATGCAGAACTTGACAACGTT...CAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTAACGTTGTCAAGTTCTaGATCCACGGGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSNVVKF*IHGWKL
Trigger: CAGCTTCCACCCGTGGATGCAGAACTTGACAACGTT...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACGGTGGCCACAGGTTTaGACGATGCCACTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTRWPQV*TMPLSH
Trigger: GTGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCG...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTCCCAGAGACCAATGGTaGCGTTGCCTTGGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESPRDQW*RCLGAR
Trigger: GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGG...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCCAACGCCAAAGAGAATGCCAATaGGTCCAGCTTTATGGGAGT +
Preference number: 4 (lower is better)
Translates to: LCTLLVQALQGAVHVLQRQRECQ*VQLYGS
Trigger: ACTCCCATAAAGCTGGACCCATTGGCATTCTCTTTG...GCGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CCA 90 bp GAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCCAGTTTCCGACTCCTTTTGATACGACAGTCGTGGTTTaGCGTTGTACTCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ESSQVLEIAICQFPTPFDTTVVV*RCTLSG
Trigger: ACCTGACAGAGTACAACGCCAAACCACGACTGTCGT...ATCAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CCA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCAGACACAGCCTCGGGTaGTCGGGGTGGCATGCCTGT +
Preference number: 4 (lower is better)
Translates to: NVYRNATENSVKLYTVIGRHSLG*SGWHAC
Trigger: ACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCT...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CAAAAGGTATATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGAGACACAGCCTCGGGTaGTCGGGGTGGCATGCCTGT +
Preference number: 4 (lower is better)
Translates to: QKVYTPFTVHKMHLSCKLRHSLG*SGWHAC
Trigger: ACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCT...CAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGAGACGCCTCCGGTGTTaGAGACACAGCCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SCTPINVYRNATENSVKLRRLRC*RHSLGW
Trigger: CCACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCT...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTATCAGACGCCTCCGGTGTTaGAGACACAGCCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: LDTSLMILMLAALQLMFIRRLRC*RHSLGW
Trigger: CCACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCT...GATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TCCCTGCTTCATAGTAGACAATCTTGTCATAATCAATTTTGGATTCATATGCCTAGACGCCTCCGGTGTTaGAGACACAGCCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLLHSRQSCHNQFWIHMPRRLRC*RHSLGW
Trigger: CCACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCT...AGGCATATGAATCCAAAATTGATTATGACAAGATTGTCTACTATGAAGCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS-3UTR CCA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACACAGTATCTAGAGCGGTaGCCACAGGTTTGCACGATG +
Preference number: 4 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTQYLER*PQVCTM
Trigger: CATCGTGCAAACCTGTGGCCACCGCTCTAGATACTG...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CCA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTCTACCCAGAGACCAATaGTGCCGTTGCCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVLPRDQ*CRCLGA
Trigger: GGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAG...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTTTCCAAGTGGAACATaGCCAATCTTTGATAAAGTA +
Preference number: 4 (lower is better)
Translates to: SFLKHYPETNGAVALVPAFPSGT*PIFDKV
Trigger: TACTTTATCAAAGATTGGCCATGTTCCACTTGGAAA...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGCACATGAAAAGACCTaGGGGGAATGCCTACATCTG +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSAHEKT*GECLHL
Trigger: CAGATGTAGGCATTCCCCCCAGGTCTTTTCATGTGC...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CCA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTAAAAAGTTTGGGTTaGACGGGCACCGGCACCACC +
Preference number: 4 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTLKSLG*TGTGTT
Trigger: GGTGGTGCCGGTGCCCGTCCAACCCAAACTTTTTAG...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539194.6
CDS-3UTR CCA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTCGCCCCCATCCCCAGTaGATGGAAAGAAGACCCAAG +
Preference number: 4 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVRPHPQ*MERRPK
Trigger: CTTGGGTCTTCTTTCCATCCACTGGGGATGGGGGCG...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539194.6
CDS-3UTR CCA 90 bp AAATCACCAACAGGGAGATTGCAAAGCATTTCCTCAGGAAGGGCCCATTTTCCTTTAGGCTGGTCATGGTaGCTTACGTCTACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: KSPTGRLQSISSGRAHFPLGWSW*LTSTVP
Trigger: TGGAACTGTAGACGTAAGCCACCATGACCAGCCTAA...AGGAAAATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR CAA 72 bp TTTCACGCTGGTCAGACTGCTGCTAAGCTGTGTACTTaGTTGGTGCAAGCTCTTCAAGGTGCTGTTCATGTT +
Preference number: 4 (lower is better)
Translates to: FHAGQTAAKLCT*LVQALQGAVHV
Trigger: AACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAGCGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGAAGCACTGGATCTGCTaGATCTTCAGTTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LCSFLKHYPETNGAVALVKHWIC*IFSFLS
Trigger: AGACAGAAAACTGAAGATTCAGCAGATCCAGTGCTT...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp AGTTTTCACGCTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTAAGCACTGGATCTGCTaGATCTTCAGTTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SFHAGQTAAKLCTLLVQAKHWIC*IFSFLS
Trigger: AGACAGAAAACTGAAGATTCAGCAGATCCAGTGCTT...AGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAGCGTGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR TCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTGTTTCCGACTCCTTTTaGTCCGGGTTCTTACCTGGT +
Preference number: 4 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIVSDSF*SGFLPG
Trigger: ACCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAAC...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp AATGTTGAGATGTTCACTGATATTGAAGCTGTTCTGCAGGTGAAGAGTGCCGTACATCAAGAACAGGGATaGTGTTGGGTCTCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: NVEMFTDIEAVLQVKSAVHQEQG*CWVSVG
Trigger: ACCGACTGAGACCCAACATCATCCCTGTTCTTGATG...TACGGCACTCTTCACCTGCAGAACAGCTTCAATATCAGTGAACATCTCAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR TCA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCACATCAAGAACAGGGATaGTGTTGGGTCTCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPHQEQG*CWVSVG
Trigger: ACCGACTGAGACCCAACATCATCCCTGTTCTTGATG...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTAGGGTCATTGAGAGATaGCCGCAGGCTAGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSARVIER*PQASFH
Trigger: GTGAAAACTAGCCTGCGGTCATCTCTCAATGACCCT...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCAGGGTCATTGAGAGATaGCCGCAGGCTAGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: LLDLESPCRPRNYQKSVIRVIER*PQASFH
Trigger: GTGAAAACTAGCCTGCGGTCATCTCTCAATGACCCT...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGGGCTTAGAGACAATCTaGTGCTGTTGCAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLGLETI*CCCRFH
Trigger: GTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCC...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp AAATCACCAACAGGGAGATTGCAAAGCATTTCCTCAGGAAGGGCCCATTTTCCTACCCAGCCACCAGTATaGATCATACTCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: KSPTGRLQSISSGRAHFPTQPPV*IILFQC
Trigger: ACATTGGAAGAGTATGATTCATACTGGTGGCTGGGT...AGGAAAATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACAGGAGGGAGTCATCCTTaGATAGTGATGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTGGSHP*IVMDHG
Trigger: TCCATGGTCCATCACTATTCAAGGATGACTCCCTCC...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCATGAAAATCTCTGCGTaGAGAATATGCTGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTMKISA*RICCRF
Trigger: AAACCTACAGCATATTCTTCACGCAGAGATTTTCAT...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp AAGGTGCTGTTCATGTTCTCCAACGCCTCTTTGGTCTCCTTGATCGCTGTTGCCCCAGTTCTTCATTGCTaGTCACTTTTGATAATGACA +
Preference number: 4 (lower is better)
Translates to: KVLFMFSNASLVSLIAVAPVLHC*SLLIMT
Trigger: TGTCATTATCAAAAGTGATCAGCAATGAAGAACTGG...GGCAACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR GCA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAAGAACTTGGTGCCTCCTaGCTCAGAGCTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: STFERTAFLSQDLSLSFEELGAS*LRASGS
Trigger: GCTTCCAGAAGCTCTGAGGCAGGAGGCACCAAGTTC...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCATCTGTGGATGAAGGCTaGCCTCCTGAAAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPSVDEG*PPEKEF
Trigger: GAACTCCTTTTCAGGAGGGCAGCCTTCATCCACAGA...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTTCCTTCTGTCGCTGGTaGATTTCTCCACCACATTTG +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSSFCRW*ISPPHL
Trigger: CAAATGTGGTGGAGAAATGCACCAGCGACAGAAGGA...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGGTTTCACTTGATGGATaGACCAAGCACAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLVSLDG*TKHRGS
Trigger: TGACCCTCTGTGCTTGGTGCATCCATCAAGTGAAAC...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAACGTTGTCAAGTTCTaGATCCACGGGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPNVVKF*IHGWKL
Trigger: CAGCTTCCACCCGTGGATGCAGAACTTGACAACGTT...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTTATGCTTCCAGTATaGTCATTAATGTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: FILKALPRDQWCRCLGARLMLPV*SLMLRC
Trigger: ACATCTCAACATTAATGAGCATACTGGAAGCATAAG...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCTTCTGGAAGCCTTaGGGAAGGCAAGCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFSFWKP*GRQACS
Trigger: GGAACACGCTTGCCTTCCCCAAGGCTTCCAGAAGCT...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAGGGTTGCTATTCAGCTaGCTTAGAGACAATCTGATG +
Preference number: 4 (lower is better)
Translates to: LALLLDLESPCRPRNYQKGLLFS*LRDNLM
Trigger: CATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCC...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCACTGCTACGACAGTCGTaGTTTGGCGTTGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPLLRQS*FGVVLC
Trigger: ACAGAGTACAACGCCAAACCACGACTGTCGTAGCAG...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACCACTGGCGTTGCTCCTaGATTTGGAAAGTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHHWRCS*IWKVLV
Trigger: TACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTG...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGGCGAAACCCGAGCCCTaGACGCACTCTGATTGGACC +
Preference number: 4 (lower is better)
Translates to: LQLMFIVMQQKTLLNCTPAKPEP*THSDWT
Trigger: GGTCCAATCAGAGTGCGTCCAGGGCTCGGGTTTCGC...CGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505450.5
3UTR CAA 72 bp GGAGTTTCATTCAAGAGAGTTCGCAAGTCCTTGAAATaGCTATCTGCCAGTTTCCGACTCCTTTTGATCCGG +
Preference number: 4 (lower is better)
Translates to: GVSFKRVRKSLK*LSASFRLLLIR
Trigger: CCGGATCAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTCTTGAATGAAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CAA 72 bp CAAGACCCTTTTGATACCTGCTACGACAGTCGTGGTTaGGCGTTGTACTCTGTCAGGTATATCATTAAGGGA +
Preference number: 4 (lower is better)
Translates to: QDPFDTCYDSRG*ALYSVRYIIKG
Trigger: TCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATCAAAAGGGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAAAGCACTGGATCTGCTaGATCTTCAGTTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LALLLDLESPCRPRNYQKKHWIC*IFSFLS
Trigger: AGACAGAAAACTGAAGATTCAGCAGATCCAGTGCTT...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACGAGTTCGCAAGTCCTTaGAATTGCTATCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHEFASP*NCYLPV
Trigger: AACTGGCAGATAGCAATTTCAAGGACTTGCGAACTC...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGAGGGTCATTGAGAGATaGCCGCAGGCTAGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQRVIER*PQASFH
Trigger: GTGAAAACTAGCCTGCGGTCATCTCTCAATGACCCT...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACAAGGGTCATTGAGAGATaGCCGCAGGCTAGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTRVIER*PQASFH
Trigger: GTGAAAACTAGCCTGCGGTCATCTCTCAATGACCCT...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TTGTCGATATCTGAACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACAAGGGTCATTGAGAGATaGCCGCAGGCTAGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: LSISEPMEFKTLLIPATTRVIER*PQASFH
Trigger: GTGAAAACTAGCCTGCGGTCATCTCTCAATGACCCT...TGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGATATCGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACAATTCAAGACCCTTTTaGTACCTGCTACGACAGTCG +
Preference number: 4 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHNSRPF*YLLRQS
Trigger: CGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATT...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTAATTCAAGACCCTTTTaGTACCTGCTACGACAGTCG +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSNSRPF*YLLRQS
Trigger: CGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATT...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGATAAACAGAGAATGCTaGGAGTATATCCTGAATAGG +
Preference number: 4 (lower is better)
Translates to: LVRLLLSCVLCWCKLFKVINREC*EYILNR
Trigger: CCTATTCAGGATATACTCTCAGCATTCTCTGTTTAT...CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp AAAGCATTTCCTCAGGAAGGGCCCATTTTCCTTCTGTCGCTGGTGCATTTCTCCCCATGGACTATAACGTaGTTGTGTTCATTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: KAFPQEGPIFLLSLVHFSPWTIT*LCSFLK
Trigger: CTTTAAGAATGAACACAATCACGTTATAGTCCATGG...GGAGAAATGCACCAGCGACAGAAGGAAAATGGGCCCTTCCTGAGGAAATGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR TCA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACAGGAGGGAGTCATCCTTaGATAGTGATGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTGGSHP*IVMDHG
Trigger: TCCATGGTCCATCACTATTCAAGGATGACTCCCTCC...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTGAACTTGGTGCCTCCTaGCTCAGAGCTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSELGAS*LRASGS
Trigger: GCTTCCAGAAGCTCTGAGGCAGGAGGCACCAAGTTC...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR GCA 90 bp TTGATACTGTTCAGATCTGTGAACGCCTTGTCCTTGGTAGTGTTGTACTGGGCCCTAGTTCAAAGAGAATaGCAATGGGTCCAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: LILFRSVNALSLVVLYWALVQRE*QWVQLY
Trigger: ATAAAGCTGGACCCATTGGCATTCTCTTTGAACTAG...GGCCCAGTACAACACTACCAAGGACAAGGCGTTCACAGATCTGAACAGTATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTCACCAACAGGGAGATTaGAAAGCATTTCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSHQQGD*KAFPQE
Trigger: TTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTG...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGCTCCTTGATCGCTGTTaGCATGGACTTAATCTCATC +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLLLDRC*HGLNLI
Trigger: GATGAGATTAAGTCCATGGCAACAGCGATCAAGGAG...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCGCAAGCTCTTCAAGGTaGTGTTCATGTTCTCCAACG +
Preference number: 4 (lower is better)
Translates to: LLDLESPCRPRNYQKSVIASSSR*CSCSPT
Trigger: CGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGC...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTGCAAGCTCTTCAAGGTaGTGTTCATGTTCTCCAACG +
Preference number: 4 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIASSSR*CSCSPT
Trigger: CGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGC...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAAGCAAGCTCTTCAAGGTaGTGTTCATGTTCTCCAACG +
Preference number: 4 (lower is better)
Translates to: WSYAGFSMIAFACHFQVEASSSR*CSCSPT
Trigger: CGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGC...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp TTGCTCTGGAGTTTCATTCAAGAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCGCAAGCTCTTCAAGGTaGTGTTCATGTTCTCCAACG +
Preference number: 4 (lower is better)
Translates to: LLWSFIQESSQVLEIAICASSSR*CSCSPT
Trigger: CGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGC...GCAGATAGCAATTTCAAGGACTTGCGAACTCTCTTGAATGAAACTCCAGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACAGTTTCACTTGATGGATaGACCAAGCACAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTVSLDG*TKHRGS
Trigger: TGACCCTCTGTGCTTGGTGCATCCATCAAGTGAAAC...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR GCA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGAACGTTGTCAAGTTCTaGATCCACGGGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: MDYNVIVFILKALPRDQWNVVKF*IHGWKL
Trigger: CAGCTTCCACCCGTGGATGCAGAACTTGACAACGTT...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TTGCTCTGGAGTTTCATTCAAGAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCGACCCTTTTGATACCTaGTACGACAGTCGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LLWSFIQESSQVLEIAICDPFDT*YDSRGL
Trigger: CAAACCACGACTGTCGTAGCAGGTATCAAAAGGGTC...GCAGATAGCAATTTCAAGGACTTGCGAACTCTCTTGAATGAAACTCCAGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCCTTATGCTTCCAGTATaGTCATTAATGTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTLMLPV*SLMLRC
Trigger: ACATCTCAACATTAATGAGCATACTGGAAGCATAAG...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCACAAATGAATCAGAACTaGAATCTGCACATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPQMNQN*NLHMKR
Trigger: TCTTTTCATGTGCAGATTGCAGTTCTGATTCATTTG...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
CDS-3UTR GCA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTTCCGATAAACTTGCTTaGAACTCTGGCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSASDKLA*NSGTAF
Trigger: GAAGGCTGTGCCAGAGTTGCAAGCAAGTTTATCGGA...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS-3UTR CCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTAGCTTCTGGAAGCCTTaGGGAAGGCAAGCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSSFWKP*GRQACS
Trigger: GGAACACGCTTGCCTTCCCCAAGGCTTCCAGAAGCT...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTCTCAAAGTATCTTCTaGGAAATCACGCGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLSQSIF*EITRLY
Trigger: GTACAGCCGCGTGATTTCCCAGAAGATACTTTGAGA...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACGGGTTGCTATTCAGCTaGCTTAGAGACAATCTGATG +
Preference number: 4 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHGLLFS*LRDNLM
Trigger: CATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCC...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCTGCTACGACAGTCGTaGTTTGGCGTTGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQLLRQS*FGVVLC
Trigger: ACAGAGTACAACGCCAAACCACGACTGTCGTAGCAG...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGCTGCTACGACAGTCGTaGTTTGGCGTTGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: MDYNVIVFILKALPRDQWLLRQS*FGVVLC
Trigger: ACAGAGTACAACGCCAAACCACGACTGTCGTAGCAG...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAGTTCCTCAAATTTCCTaGGGGCAAACTGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LALLLDLESPCRPRNYQKVPQIS*GQTVCF
Trigger: AAAGCAAACAGTTTGCCCCCAGGAAATTTGAGGAAC...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTCAGTATCTAGAGCGGTaGCCACAGGTTTGCACGATG +
Preference number: 4 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVQYLER*PQVCTM
Trigger: CATCGTGCAAACCTGTGGCCACCGCTCTAGATACTG...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTCGTTGCTCCTGGATTTaGAAAGTCCTTGTAGACCCA +
Preference number: 4 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSARCSWI*KVLVDP
Trigger: TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAATCTTTCCTGTAAACTaGTGTGTGTTCAGCACACTC +
Preference number: 4 (lower is better)
Translates to: LALLLDLESPCRPRNYQKIFPVN*CVFSTL
Trigger: GAGTGTGCTGAACACACACCAGTTTACAGGAAAGAT...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp GATACCTGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTAAATTAGGCTGGTCATaGTGGCTTACGTCTACAGTT +
Preference number: 4 (lower is better)
Translates to: DTCYDSRGLALYSVRYIIKLGWS*WLTSTV
Trigger: AACTGTAGACGTAAGCCACCATGACCAGCCTAATTT...AATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR CAA 72 bp TGCTCTGGAGTTTCATTCAAGAGAGTTCGCAAGTCCTaGAAATTGCTATCTGCCAGTTTCCGACTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: CSGVSFKRVRKS*KLLSASFRLLL
Trigger: CAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTCTTGAATGAAACTCCAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp CTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGCTTCAGTTTTCTGTCTaGGGCTGGCTTGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LQLMFIVMQQKTLLNCTPLQFSV*GWLEAR
Trigger: CCTCGCCTCAAGCCAGCCTCAGACAGAAAACTGAAG...CGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGAAGATCCTCCAAACATaGGGTAGAACTTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQKILQT*GRTWCL
Trigger: GAGGCACCAAGTTCTACCTCATGTTTGGAGGATCTT...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTGAGTTCGCAAGTCCTTaGAATTGCTATCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIEFASP*NCYLPV
Trigger: AACTGGCAGATAGCAATTTCAAGGACTTGCGAACTC...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCCATCAAGAACAGGGATaGTGTTGGGTCTCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIHQEQG*CWVSVG
Trigger: ACCGACTGAGACCCAACATCATCCCTGTTCTTGATG...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCCATCAAGAACAGGGATaGTGTTGGGTCTCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFHQEQG*CWVSVG
Trigger: ACCGACTGAGACCCAACATCATCCCTGTTCTTGATG...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCAGGGTCATTGAGAGATaGCCGCAGGCTAGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIRVIER*PQASFH
Trigger: GTGAAAACTAGCCTGCGGTCATCTCTCAATGACCCT...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TTGTCGATATCTGAACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACAGGCTTAGAGACAATCTaGTGCTGTTGCAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: LSISEPMEFKTLLIPATTGLETI*CCCRFH
Trigger: GTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCC...TGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGATATCGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTAATTCAAGACCCTTTTaGTACCTGCTACGACAGTCG +
Preference number: 4 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSANSRPF*YLLRQS
Trigger: CGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATT...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp GACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTAAGGGATTGATAAATTCAAGACCCTTTTaGTACCTGCTACGACAGTCG +
Preference number: 4 (lower is better)
Translates to: DSRGLALYSVRYIIKGLINSRPF*YLLRQS
Trigger: CGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATT...TATCAATCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACAAATTCAAGACCCTTTTaGTACCTGCTACGACAGTCG +
Preference number: 4 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTNSRPF*YLLRQS
Trigger: CGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATT...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp CTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGATCCAACTCCAACCATaGGGAAGACGCCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: LQLMFIVMQQKTLLNCTPIQLQP*GRRLRC
Trigger: ACACCGGAGGCGTCTTCCTCATGGTTGGAGTTGGAT...CGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GATACCTGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTTTTGTGATGAAGTTCTaGGCAAAATCCAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: DTCYDSRGLALYSVRYIIFVMKF*AKSREA
Trigger: AGCTTCTCTGGATTTTGCTCAGAACTTCATCACAAA...AATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR TCA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACACAGCTATCAATGTTGTaGTGGGCTTGTCATAACAGG +
Preference number: 4 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTQLSML*WACHNR
Trigger: CCTGTTATGACAAGCCCATCACAACATTGATAGCTG...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGACGCAGGTTTCTCTATaGTTGCTTTTGCATGCCATT +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLTQVSL*LLLHAI
Trigger: AATGGCATGCAAAAGCAATCATAGAGAAACCTGCGT...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TCCCTGCTTCATAGTAGACAATCTTGTCATAATCAATTTTGGATTCATATGCCTACTTCCTTCACACCATaGGGAAGACGCCTCCGGTGT +
Preference number: 4 (lower is better)
Translates to: SLLHSRQSCHNQFWIHMPTSFTP*GRRLRC
Trigger: ACACCGGAGGCGTCTTCCTCATGGTGTGAAGGAAGT...AGGCATATGAATCCAAAATTGATTATGACAAGATTGTCTACTATGAAGCAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS-3UTR GCA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTCACCAACAGGGAGATTaGAAAGCATTTCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSAHQQGD*KAFPQE
Trigger: TTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTG...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACACTCCTTGATCGCTGTTaGCATGGACTTAATCTCATC +
Preference number: 4 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTLLDRC*HGLNLI
Trigger: GATGAGATTAAGTCCATGGCAACAGCGATCAAGGAG...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR GCA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAAGCCTCAGTTCAGGGTTaGTATTCAGCTGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: STFERTAFLSQDLSLSFEASVQG*YSAGLE
Trigger: CTCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGC...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAACGTTGTCAAGTTCTaGATCCACGGGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFNVVKF*IHGWKL
Trigger: CAGCTTCCACCCGTGGATGCAGAACTTGACAACGTT...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACAGACCCTTTTGATACCTaGTACGACAGTCGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTDPFDT*YDSRGL
Trigger: CAAACCACGACTGTCGTAGCAGGTATCAAAAGGGTC...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTTCTGCAGGTGAAGAGTaGCGTAAGTGCCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: VCSAHSTHGNMLESSHHISAGEE*RKCLYF
Trigger: AAAATAGAGGCACTTACGGCACTCTTCACCTGCAGA...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGCGGTGGCCACAGGTTTaGACGATGCCACTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SCTPINVYRNATENSVKLRWPQV*TMPLSH
Trigger: GTGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCG...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp TTATACAAATCACCAACAGGGAGATTGCAAAGCATTTCCTCAGGAAGGGCCCATCAAAGGTTTCATCCATaGTGGACACCAGATCTAAGA +
Preference number: 4 (lower is better)
Translates to: LYKSPTGRLQSISSGRAHQRFHP*WTPDLR
Trigger: TCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTG...ATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR GCA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTGCCGCGTGGGGATCTaGCTCAGTCACTTAAAGATC +
Preference number: 4 (lower is better)
Translates to: RTLDTSLMILMLAALQLMCRVGI*LSHLKI
Trigger: GATCTTTAAGTGACTGAGGCAGATCCCCACGCGGCA...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS-3UTR CCA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTAGGCAAGCGTGTTCCTaGGCAGAAGAGGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TLDTSLMILMLAALQLMFRQACS*AEEEQE
Trigger: TTCCTGCTCCTCTTCTGCCCAGGAACACGCTTGCCT...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGAGGCAAGCGTGTTCCTaGGCAGAAGAGGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SCTPINVYRNATENSVKLRQACS*AEEEQE
Trigger: TTCCTGCTCCTCTTCTGCCCAGGAACACGCTTGCCT...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTATCAGCTTCTGGAAGCCTTaGGGAAGGCAAGCGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LDTSLMILMLAALQLMFISFWKP*GRQACS
Trigger: GGAACACGCTTGCCTTCCCCAAGGCTTCCAGAAGCT...GATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAACAAAGAGAATGCCAATaGGTCCAGCTTTATGGGAGT +
Preference number: 4 (lower is better)
Translates to: WSYAGFSMIAFACHFQVEQRECQ*VQLYGS
Trigger: ACTCCCATAAAGCTGGACCCATTGGCATTCTCTTTG...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTCAAAGAGAATGCCAATaGGTCCAGCTTTATGGGAGT +
Preference number: 4 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIQRECQ*VQLYGS
Trigger: ACTCCCATAAAGCTGGACCCATTGGCATTCTCTTTG...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAAAGCTGTGTACTTTGTTaGTGCAAGCTCTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: WSYAGFSMIAFACHFQVESCVLC*CKLFKV
Trigger: CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCT...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTTTCTGCATCCACGGGTaGAAGCTGCCTCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESFCIHG*KLPQFR
Trigger: CCTGAACTGAGGCAGCTTCCACCCGTGGATGCAGAA...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTTTCTGCATCCACGGGTaGAAGCTGCCTCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: TLDTSLMILMLAALQLMFFCIHG*KLPQFR
Trigger: CCTGAACTGAGGCAGCTTCCACCCGTGGATGCAGAA...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCACGACAGTCGTGGTTTaGCGTTGTACTCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKITTVVV*RCTLSG
Trigger: ACCTGACAGAGTACAACGCCAAACCACGACTGTCGT...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGCGTTGCTCCTGGATTTaGAAAGTCCTTGTAGACCCA +
Preference number: 4 (lower is better)
Translates to: MDYNVIVFILKALPRDQWRCSWI*KVLVDP
Trigger: TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
3UTR CAA 72 bp CTGTTCAGATCTGTGAACGCCTTGTCCTTGGTAGTGTaGTACTGGGCCAATATATATTTGATTTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LFRSVNALSLVV*YWANIYLICSG
Trigger: TCCAGAGCAAATCAAATATATATTGGCCCAGTACAACACTACCAAGGACAAGGCGTTCACAGATCTGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
3UTR CAA 72 bp CCTTTTGATACCTGCTACGACAGTCGTGGTTTGGCGTaGTACTCTGTCAGGTATATCATTAAGGGATTGATA +
Preference number: 4 (lower is better)
Translates to: PFDTCYDSRGLA*YSVRYIIKGLI
Trigger: TATCAATCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATCAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCAAGATCCTCCAAACATaGGGTAGAACTTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIKILQT*GRTWCL
Trigger: GAGGCACCAAGTTCTACCTCATGTTTGGAGGATCTT...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCGGCTTAGAGACAATCTaGTGCTGTTGCAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIGLETI*CCCRFH
Trigger: GTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCC...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCGTTGAAGTATCTTaGCGCTTTGGTATAGAGTGC +
Preference number: 4 (lower is better)
Translates to: MDYNVIVFILKALPRDQWCVEVS*RFGIEC
Trigger: GCACTCTATACCAAAGCGTCAAGATACTTCAACGCA...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGCCATTCCCTGTGCGTTaGAGTATCTTGACGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RTLDTSLMILMLAALQLMPFPVR*SILTLW
Trigger: CCAAAGCGTCAAGATACTTCAACGCACAGGGAATGG...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTTTTGTGATGAAGTTCTaGGCAAAATCCAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSFVMKF*AKSREA
Trigger: AGCTTCTCTGGATTTTGCTCAGAACTTCATCACAAA...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACAGCTATCAATGTTGTaGTGGGCTTGTCATAACAGG +
Preference number: 4 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTQLSML*WACHNR
Trigger: CCTGTTATGACAAGCCCATCACAACATTGATAGCTG...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGCAGCTATCAATGTTGTaGTGGGCTTGTCATAACAGG +
Preference number: 4 (lower is better)
Translates to: MDYNVIVFILKALPRDQWQLSML*WACHNR
Trigger: CCTGTTATGACAAGCCCATCACAACATTGATAGCTG...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGGGAGGGAGTCATCCTTaGATAGTGATGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: RTLDTSLMILMLAALQLMGGSHP*IVMDHG
Trigger: TCCATGGTCCATCACTATTCAAGGATGACTCCCTCC...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAATGAAAATCTCTGCGTaGAGAATATGCTGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: LALLLDLESPCRPRNYQKMKISA*RICCRF
Trigger: AAACCTACAGCATATTCTTCACGCAGAGATTTTCAT...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTAAGGGATCTCTCTCTCTCTTTTaGATTTGTCAGATGGAGTTA +
Preference number: 4 (lower is better)
Translates to: CYDSRGLALYSVRYIIKGSLSLF*ICQMEL
Trigger: TAACTCCATCTGACAAATTCAAAAGAGAGAGAGAGA...TCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR TCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTAAACAACTCCACTTTTaGACGAACAGCATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSKQLHF*TNSISL
Trigger: GAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTT...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGGGTCTCATAATTTGTTaGAGGCAATTCATAATTCCA +
Preference number: 4 (lower is better)
Translates to: LCSFLKHYPETNGAVALVGLIIC*RQFIIP
Trigger: TGGAATTATGAATTGCCTGCAACAAATTATGAGACC...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTTCCTTCTGTCGCTGGTaGATTTCTCCACCACATTTG +
Preference number: 4 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVSFCRW*ISPPHL
Trigger: CAAATGTGGTGGAGAAATGCACCAGCGACAGAAGGA...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCTCCTTCTGTCGCTGGTaGATTTCTCCACCACATTTG +
Preference number: 4 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFSFCRW*ISPPHL
Trigger: CAAATGTGGTGGAGAAATGCACCAGCGACAGAAGGA...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTCTTGAAATTGCTATCTaGCAGTTTCCGACTCCTTTT +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSLEIAI*QFPTPF
Trigger: AAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAG...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp ATCTGTCCTAAGAACGTTATTAACGTTGTCAAGTTCTGCATCCACGGGTGGAAGCTTGAAATTGCTATCTaGCAGTTTCCGACTCCTTTT +
Preference number: 4 (lower is better)
Translates to: ICPKNVINVVKFCIHGWKLEIAI*QFPTPF
Trigger: AAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAG...CTTCCACCCGTGGATGCAGAACTTGACAACGTTAATAACGTTCTTAGGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGCTCCTTGATCGCTGTTaGCATGGACTTAATCTCATC +
Preference number: 4 (lower is better)
Translates to: MDYNVIVFILKALPRDQWLLDRC*HGLNLI
Trigger: GATGAGATTAAGTCCATGGCAACAGCGATCAAGGAG...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGAACGTTGTCAAGTTCTaGATCCACGGGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RTLDTSLMILMLAALQLMNVVKF*IHGWKL
Trigger: CAGCTTCCACCCGTGGATGCAGAACTTGACAACGTT...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACCCGGAATAATTCCTTaGTCGTGTAAGGTTCACAGA +
Preference number: 4 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTPGIIP*SCKVHR
Trigger: TCTGTGAACCTTACACGAGCAAGGAATTATTCCGGG...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGCCCGGAATAATTCCTTaGTCGTGTAAGGTTCACAGA +
Preference number: 4 (lower is better)
Translates to: MDYNVIVFILKALPRDQWPGIIP*SCKVHR
Trigger: TCTGTGAACCTTACACGAGCAAGGAATTATTCCGGG...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTCTCAAAGTATCTTCTaGGAAATCACGCGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: MDYNVIVFILKALPRDQWSQSIF*EITRLY
Trigger: GTACAGCCGCGTGATTTCCCAGAAGATACTTTGAGA...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGGGGTTGCTATTCAGCTaGCTTAGAGACAATCTGATG +
Preference number: 4 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQGLLFS*LRDNLM
Trigger: CATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCC...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCGTTCCTCAAATTTCCTaGGGGCAAACTGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LLDLESPCRPRNYQKSVIVPQIS*GQTVCF
Trigger: AAAGCAAACAGTTTGCCCCCAGGAAATTTGAGGAAC...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CCA 90 bp TTGCTCTGGAGTTTCATTCAAGAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCGTTCCTCAAATTTCCTaGGGGCAAACTGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LLWSFIQESSQVLEIAICVPQIS*GQTVCF
Trigger: AAAGCAAACAGTTTGCCCCCAGGAAATTTGAGGAAC...GCAGATAGCAATTTCAAGGACTTGCGAACTCTCTTGAATGAAACTCCAGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR CCA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTCACTGGCGTTGCTCCTaGATTTGGAAAGTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVHWRCS*IWKVLV
Trigger: TACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTG...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACAATCTTTCCTGTAAACTaGTGTGTGTTCAGCACACTC +
Preference number: 4 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTIFPVN*CVFSTL
Trigger: GAGTGTGCTGAACACACACCAGTTTACAGGAAAGAT...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CCA 90 bp TTGTACTCTGTCAGGTATATCATTAAGGGATTGATAGCCCTGTTGGACCAGGCCTTTGAATTTGTCAGATaGAGTTACGCAGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LYSVRYIIKGLIALLDQAFEFVR*SYAGFS
Trigger: AGAGAAACCTGCGTAACTCCATCTGACAAATTCAAA...GGCCTGGTCCAACAGGGCTATCAATCCCTTAATGATATACCTGACAGAGTACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
3UTR CAA 72 bp AGCACTGAATTGATACTGTTCAGATCTGTGAACGCCTaGTCCTTGGTAGTGTTGTACTGGGCCAATATATAT +
Preference number: 4 (lower is better)
Translates to: STELILFRSVNA*SLVVLYWANIY
Trigger: ATATATATTGGCCCAGTACAACACTACCAAGGACAAGGCGTTCACAGATCTGAACAGTATCAATTCAGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTTTCCGACTCCTTTTaGTCCGGGTTCTTACCTGGT +
Preference number: 4 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFVSDSF*SGFLPG
Trigger: ACCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAAC...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCGTTTCCGACTCCTTTTaGTCCGGGTTCTTACCTGGT +
Preference number: 4 (lower is better)
Translates to: NVYRNATENSVKLYTVIGVSDSF*SGFLPG
Trigger: ACCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAAC...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCGAGTTCGCAAGTCCTTaGAATTGCTATCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFEFASP*NCYLPV
Trigger: AACTGGCAGATAGCAATTTCAAGGACTTGCGAACTC...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp CCACCCAGCCACCAGTATGAATCATACTCTTCCAATGTAGGTAAATTTCTGTGGGGGCCAATATATATTTaGTTTGCTCTGGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: PPSHQYESYSSNVGKFLWGPIYI*FALEFH
Trigger: ATGAAACTCCAGAGCAAATCAAATATATATTGGCCC...CCACAGAAATTTACCTACATTGGAAGAGTATGATTCATACTGGTGGCTGGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTGGCTTAGAGACAATCTaGTGCTGTTGCAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSGLETI*CCCRFH
Trigger: GTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCC...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTACATTGTCGATATCTaGACCAATGGAATTCAAGAC +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLYIVDI*TNGIQD
Trigger: GTCTTGAATTCCATTGGTTCAGATATCGACAATGTA...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGATAAACAGAGAATGCTaGGAGTATATCCTGAATAGG +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLINREC*EYILNR
Trigger: CCTATTCAGGATATACTCTCAGCATTCTCTGTTTAT...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTACCCAGCCACCAGTATaGATCATACTCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVTQPPV*IILFQC
Trigger: ACATTGGAAGAGTATGATTCATACTGGTGGCTGGGT...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCTGCGTTGAAGTATCTTaGCGCTTTGGTATAGAGTGC +
Preference number: 4 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFCVEVS*RFGIEC
Trigger: GCACTCTATACCAAAGCGTCAAGATACTTCAACGCA...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTCCATTCCCTGTGCGTTaGAGTATCTTGACGCTTTGG +
Preference number: 4 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESPFPVR*SILTLW
Trigger: CCAAAGCGTCAAGATACTTCAACGCACAGGGAATGG...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAATTTGTGATGAAGTTCTaGGCAAAATCCAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: WSYAGFSMIAFACHFQVEFVMKF*AKSREA
Trigger: AGCTTCTCTGGATTTTGCTCAGAACTTCATCACAAA...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGCCATGGACTATAACGTaGTTGTGTTCATTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLPWTIT*LCSFLK
Trigger: CTTTAAGAATGAACACAATCACGTTATAGTCCATGG...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp ATATTTACCTTGTGCTTTCATGCAAATTTAGGGACCAAACTCAAAGGTTTCATCGGAGGGAGTCATCCTTaGATAGTGATGGACCATGGA +
Preference number: 4 (lower is better)
Translates to: IFTLCFHANLGTKLKGFIGGSHP*IVMDHG
Trigger: TCCATGGTCCATCACTATTCAAGGATGACTCCCTCC...GATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTAAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTCTCTCTCTCTCTTTTaGATTTGTCAGATGGAGTTA +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLSLSLF*ICQMEL
Trigger: TAACTCCATCTGACAAATTCAAAAGAGAGAGAGAGA...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTCCAGTTCTTCATTGCTaGTCACTTTTGATAATGACA +
Preference number: 4 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSPVLHC*SLLIMT
Trigger: TGTCATTATCAAAAGTGATCAGCAATGAAGAACTGG...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR GCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTCTGTGGATGAAGGCTaGCCTCCTGAAAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SCTPINVYRNATENSVKLSVDEG*PPEKEF
Trigger: GAACTCCTTTTCAGGAGGGCAGCCTTCATCCACAGA...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTTCTGTGGATGAAGGCTaGCCTCCTGAAAAGGAGTTC +
Preference number: 4 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFSVDEG*PPEKEF
Trigger: GAACTCCTTTTCAGGAGGGCAGCCTTCATCCACAGA...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ATCTGTCCTAAGAACGTTATTAACGTTGTCAAGTTCTGCATCCACGGGTGGAAGTCTTACCTGGTGATTTaGCACAAAACCATAGAAGAT +
Preference number: 4 (lower is better)
Translates to: ICPKNVINVVKFCIHGWKSYLVI*HKTIED
Trigger: ATCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGA...CTTCCACCCGTGGATGCAGAACTTGACAACGTTAATAACGTTCTTAGGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp GAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCCAGTTTCCGACTCCTTTTGATTCTTACCTGGTGATTTaGCACAAAACCATAGAAGAT +
Preference number: 4 (lower is better)
Translates to: ESSQVLEIAICQFPTPFDSYLVI*HKTIED
Trigger: ATCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGA...ATCAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR GCA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTCTTGAAATTGCTATCTaGCAGTTTCCGACTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSALEIAI*QFPTPF
Trigger: AAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAG...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACACTTGAAATTGCTATCTaGCAGTTTCCGACTCCTTTT +
Preference number: 4 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTLEIAI*QFPTPF
Trigger: AAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAG...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR GCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCCTCCTTGATCGCTGTTaGCATGGACTTAATCTCATC +
Preference number: 4 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKILLDRC*HGLNLI
Trigger: GATGAGATTAAGTCCATGGCAACAGCGATCAAGGAG...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCGCCTCAGTTCAGGGTTaGTATTCAGCTGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: NVYRNATENSVKLYTVIGASVQG*YSAGLE
Trigger: CTCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGC...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGCCTCAGTTCAGGGTTaGTATTCAGCTGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFASVQG*YSAGLE
Trigger: CTCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGC...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTAACGTTGTCAAGTTCTaGATCCACGGGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESNVVKF*IHGWKL
Trigger: CAGCTTCCACCCGTGGATGCAGAACTTGACAACGTT...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTGACCCTTTTGATACCTaGTACGACAGTCGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSDPFDT*YDSRGL
Trigger: CAAACCACGACTGTCGTAGCAGGTATCAAAAGGGTC...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR GCA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAACCCGGAATAATTCCTTaGTCGTGTAAGGTTCACAGA +
Preference number: 4 (lower is better)
Translates to: STFERTAFLSQDLSLSFEPGIIP*SCKVHR
Trigger: TCTGTGAACCTTACACGAGCAAGGAATTATTCCGGG...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCGACTTTCCAATTCACTaGTTATGCTTCCAGTATGCT +
Preference number: 4 (lower is better)
Translates to: LLDLESPCRPRNYQKSVIDFPIH*LCFQYA
Trigger: AGCATACTGGAAGCATAAGCAGTGAATTGGAAAGTC...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCCACAGGTTTGCACGATaGCACTTTCTCACTGATAGA +
Preference number: 4 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIHRFAR*HFLTDR
Trigger: TCTATCAGTGAGAAAGTGGCATCGTGCAAACCTGTG...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGATGATTGCTTTTGCATaGCATTTCCAAGTGGAACAT +
Preference number: 4 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLMIAFA*HFQVEH
Trigger: ATGTTCCACTTGGAAATGGCATGCAAAAGCAATCAT...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTCAAAGAGAATGCCAATaGGTCCAGCTTTATGGGAGT +
Preference number: 4 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVQRECQ*VQLYGS
Trigger: ACTCCCATAAAGCTGGACCCATTGGCATTCTCTTTG...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAAAGCTGTGTACTTTGTTaGTGCAAGCTCTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: STFERTAFLSQDLSLSFESCVLC*CKLFKV
Trigger: CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCT...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTAGCTGTGTACTTTGTTaGTGCAAGCTCTTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVSCVLC*CKLFKV
Trigger: CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCT...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTATCACGACAGTCGTGGTTTaGCGTTGTACTCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LDTSLMILMLAALQLMFITTVVV*RCTLSG
Trigger: ACCTGACAGAGTACAACGCCAAACCACGACTGTCGT...GATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGACGACAGTCGTGGTTTaGCGTTGTACTCTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SCTPINVYRNATENSVKLTTVVV*RCTLSG
Trigger: ACCTGACAGAGTACAACGCCAAACCACGACTGTCGT...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTCTGCTACGACAGTCGTaGTTTGGCGTTGTACTCTGT +
Preference number: 4 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFLLRQS*FGVVLC
Trigger: ACAGAGTACAACGCCAAACCACGACTGTCGTAGCAG...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTAGGTTTCATCCATGCTaGACACCAGATCTAAGAATT +
Preference number: 4 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIRFHPC*TPDLRI
Trigger: AATTCTTAGATCTGGTGTCCAGCATGGATGAAACCT...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CAAAAGGTATATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGCACATGAAAAGACCTaGGGGGAATGCCTACATCTG +
Preference number: 4 (lower is better)
Translates to: QKVYTPFTVHKMHLSCKLAHEKT*GECLHL
Trigger: CAGATGTAGGCATTCCCCCCAGGTCTTTTCATGTGC...CAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CCA 90 bp ATATTTACCTTGTGCTTTCATGCAAATTTAGGGACCAAACTCAAAGGTTTCATCGCACATGAAAAGACCTaGGGGGAATGCCTACATCTG +
Preference number: 4 (lower is better)
Translates to: IFTLCFHANLGTKLKGFIAHEKT*GECLHL
Trigger: CAGATGTAGGCATTCCCCCCAGGTCTTTTCATGTGC...GATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTAAGCACTGGATCTGCTaGATCTTCAGTTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVKHWIC*IFSFLS
Trigger: AGACAGAAAACTGAAGATTCAGCAGATCCAGTGCTT...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ATATTTACCTTGTGCTTTCATGCAAATTTAGGGACCAAACTCAAAGGTTTCATCAAGATCCTCCAAACATaGGGTAGAACTTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: IFTLCFHANLGTKLKGFIKILQT*GRTWCL
Trigger: GAGGCACCAAGTTCTACCTCATGTTTGGAGGATCTT...GATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp CTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTATCAAGATCCTCCAAACATaGGGTAGAACTTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LDTSLMILMLAALQLMFIKILQT*GRTWCL
Trigger: GAGGCACCAAGTTCTACCTCATGTTTGGAGGATCTT...GATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACAGGGCCAATATATATTTaGTTTGCTCTGGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTGPIYI*FALEFH
Trigger: ATGAAACTCCAGAGCAAATCAAATATATATTGGCCC...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTGGGCCAATATATATTTaGTTTGCTCTGGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIGPIYI*FALEFH
Trigger: ATGAAACTCCAGAGCAAATCAAATATATATTGGCCC...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGGCTTAGAGACAATCTaGTGCTGTTGCAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFGLETI*CCCRFH
Trigger: GTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCC...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCATACATTGTCGATATCTaGACCAATGGAATTCAAGAC +
Preference number: 4 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPYIVDI*TNGIQD
Trigger: GTCTTGAATTCCATTGGTTCAGATATCGACAATGTA...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTTACATTGTCGATATCTaGACCAATGGAATTCAAGAC +
Preference number: 4 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSAYIVDI*TNGIQD
Trigger: GTCTTGAATTCCATTGGTTCAGATATCGACAATGTA...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCATAAACAGAGAATGCTaGGAGTATATCCTGAATAGG +
Preference number: 4 (lower is better)
Translates to: LLDLESPCRPRNYQKSVIINREC*EYILNR
Trigger: CCTATTCAGGATATACTCTCAGCATTCTCTGTTTAT...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR TCA 90 bp TGGACCAGGCCATCCAAATCTGTCCTAAGAACGTTATTAACGTTGTCAAGTTCTATAAACAGAGAATGCTaGGAGTATATCCTGAATAGG +
Preference number: 4 (lower is better)
Translates to: WTRPSKSVLRTLLTLSSSINREC*EYILNR
Trigger: CCTATTCAGGATATACTCTCAGCATTCTCTGTTTAT...AGAACTTGACAACGTTAATAACGTTCTTAGGACAGATTTGGATGGCCTGGTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTACCCAGCCACCAGTATaGATCATACTCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSTQPPV*IILFQC
Trigger: ACATTGGAAGAGTATGATTCATACTGGTGGCTGGGT...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGTTTGTGATGAAGTTCTaGGCAAAATCCAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQFVMKF*AKSREA
Trigger: AGCTTCTCTGGATTTTGCTCAGAACTTCATCACAAA...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTACGCAGGTTTCTCTATaGTTGCTTTTGCATGCCATT +
Preference number: 4 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVTQVSL*LLLHAI
Trigger: AATGGCATGCAAAAGCAATCATAGAGAAACCTGCGT...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCACGCAGGTTTCTCTATaGTTGCTTTTGCATGCCATT +
Preference number: 4 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFTQVSL*LLLHAI
Trigger: AATGGCATGCAAAAGCAATCATAGAGAAACCTGCGT...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACACCAGTTCTTCATTGCTaGTCACTTTTGATAATGACA +
Preference number: 4 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTPVLHC*SLLIMT
Trigger: TGTCATTATCAAAAGTGATCAGCAATGAAGAACTGG...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR GCA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCTAGTTCAAAGAGAATaGCAATGGGTCCAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQLVQRE*QWVQLY
Trigger: ATAAAGCTGGACCCATTGGCATTCTCTTTGAACTAG...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTCTCCTTGATCGCTGTTaGCATGGACTTAATCTCATC +
Preference number: 4 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSLLDRC*HGLNLI
Trigger: GATGAGATTAAGTCCATGGCAACAGCGATCAAGGAG...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR GCA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTGCAAGCTCTTCAAGGTaGTGTTCATGTTCTCCAACG +
Preference number: 4 (lower is better)
Translates to: TLDTSLMILMLAALQLMFASSSR*CSCSPT
Trigger: CGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGC...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTGTTTCACTTGATGGATaGACCAAGCACAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TLDTSLMILMLAALQLMFVSLDG*TKHRGS
Trigger: TGACCCTCTGTGCTTGGTGCATCCATCAAGTGAAAC...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ATATTTACCTTGTGCTTTCATGCAAATTTAGGGACCAAACTCAAAGGTTTCATCGACCCTTTTGATACCTaGTACGACAGTCGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: IFTLCFHANLGTKLKGFIDPFDT*YDSRGL
Trigger: CAAACCACGACTGTCGTAGCAGGTATCAAAAGGGTC...GATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR GCA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCCAAAGGTTTCATCCATaGTGGACACCAGATCTAAGA +
Preference number: 4 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFQRFHP*WTPDLR
Trigger: TCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTG...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACCAAATGAATCAGAACTaGAATCTGCACATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHQMNQN*NLHMKR
Trigger: TCTTTTCATGTGCAGATTGCAGTTCTGATTCATTTG...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
CDS-3UTR CCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTGGGTTGCTATTCAGCTaGCTTAGAGACAATCTGATG +
Preference number: 4 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSGLLFS*LRDNLM
Trigger: CATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCC...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CCA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCCACTGGCGTTGCTCCTaGATTTGGAAAGTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: NVYRNATENSVKLYTVIGHWRCS*IWKVLV
Trigger: TACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTG...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCATCTTTCCTGTAAACTaGTGTGTGTTCAGCACACTC +
Preference number: 4 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFIFPVN*CVFSTL
Trigger: GAGTGTGCTGAACACACACCAGTTTACAGGAAAGAT...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp AAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCCAATTTCCAAGTGGAACATaGCCAATCTTTGATAAAGTA +
Preference number: 4 (lower is better)
Translates to: KLCTLLVQALQGAVHVLQFPSGT*PIFDKV
Trigger: TACTTTATCAAAGATTGGCCATGTTCCACTTGGAAA...TTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR CCA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTTTTGAATTTGTCAGATaGAGTTACGCAGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSAFEFVR*SYAGFS
Trigger: AGAGAAACCTGCGTAACTCCATCTGACAAATTCAAA...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCACTGTACACCGTAATTaGCATCTGTTAAAACAACTC +
Preference number: 4 (lower is better)
Translates to: LLDLESPCRPRNYQKSVITVHRN*HLLKQL
Trigger: GAGTTGTTTTAACAGATGCCAATTACGGTGTACAGT...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAACTGTACACCGTAATTaGCATCTGTTAAAACAACTC +
Preference number: 4 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPTVHRN*HLLKQL
Trigger: GAGTTGTTTTAACAGATGCCAATTACGGTGTACAGT...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp ACTATCATAACTAATACTGCAAAACACCTCCCTCTTCATGATGATTTCTTCACATGTGTTCTCATCTTCTaGGAAATCACGCGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: TIITNTAKHLPLHDDFFTCVLIF*EITRLY
Trigger: GTACAGCCGCGTGATTTCCCAGAAGATGAGAACACA...TGTGAAGAAATCATCATGAAGAGGGAGGTGTTTTGCAGTATTAGTTATGATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511153.5
3UTR CAA 72 bp CAATGCTTATTATTATACAAATCACCAACAGGGAGATaGCAAAGCATTTCCTCAGGAAGGGCCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: QCLLLYKSPTGR*QSISSGRAHFP
Trigger: AGGAAAATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTTGTATAATAATAAGCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCGAGTTCGCAAGTCCTTaGAATTGCTATCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: NVYRNATENSVKLYTVIGEFASP*NCYLPV
Trigger: AACTGGCAGATAGCAATTTCAAGGACTTGCGAACTC...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TTGTCGATATCTGAACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACAGGGCCAATATATATTTaGTTTGCTCTGGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: LSISEPMEFKTLLIPATTGPIYI*FALEFH
Trigger: ATGAAACTCCAGAGCAAATCAAATATATATTGGCCC...TGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGATATCGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCAATTCAAGACCCTTTTaGTACCTGCTACGACAGTCG +
Preference number: 4 (lower is better)
Translates to: NVYRNATENSVKLYTVIGNSRPF*YLLRQS
Trigger: CGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATT...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TTGTCGATATCTGAACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACATACATTGTCGATATCTaGACCAATGGAATTCAAGAC +
Preference number: 4 (lower is better)
Translates to: LSISEPMEFKTLLIPATTYIVDI*TNGIQD
Trigger: GTCTTGAATTCCATTGGTTCAGATATCGACAATGTA...TGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGATATCGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGACCCAGCCACCAGTATaGATCATACTCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: SCTPINVYRNATENSVKLTQPPV*IILFQC
Trigger: ACATTGGAAGAGTATGATTCATACTGGTGGCTGGGT...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTTGCGTTGAAGTATCTTaGCGCTTTGGTATAGAGTGC +
Preference number: 4 (lower is better)
Translates to: TLDTSLMILMLAALQLMFCVEVS*RFGIEC
Trigger: GCACTCTATACCAAAGCGTCAAGATACTTCAACGCA...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTTGCGTTGAAGTATCTTaGCGCTTTGGTATAGAGTGC +
Preference number: 4 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFCVEVS*RFGIEC
Trigger: GCACTCTATACCAAAGCGTCAAGATACTTCAACGCA...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTGCGTTGAAGTATCTTaGCGCTTTGGTATAGAGTGC +
Preference number: 4 (lower is better)
Translates to: SCTPINVYRNATENSVKLCVEVS*RFGIEC
Trigger: GCACTCTATACCAAAGCGTCAAGATACTTCAACGCA...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTAAACAACTCCACTTTTaGACGAACAGCATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVKQLHF*TNSISL
Trigger: GAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTT...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCGGTCTCATAATTTGTTaGAGGCAATTCATAATTCCA +
Preference number: 4 (lower is better)
Translates to: LLDLESPCRPRNYQKSVIGLIIC*RQFIIP
Trigger: TGGAATTATGAATTGCCTGCAACAAATTATGAGACC...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTCTCCTTGATCGCTGTTaGCATGGACTTAATCTCATC +
Preference number: 4 (lower is better)
Translates to: TLDTSLMILMLAALQLMFLLDRC*HGLNLI
Trigger: GATGAGATTAAGTCCATGGCAACAGCGATCAAGGAG...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTCCCGGAATAATTCCTTaGTCGTGTAAGGTTCACAGA +
Preference number: 4 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFPGIIP*SCKVHR
Trigger: TCTGTGAACCTTACACGAGCAAGGAATTATTCCGGG...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp CAAAAGGTATATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGTCTGCAGGTGAAGAGTaGCGTAAGTGCCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: QKVYTPFTVHKMHLSCKLSAGEE*RKCLYF
Trigger: AAAATAGAGGCACTTACGGCACTCTTCACCTGCAGA...CAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTCTTATGCTTCCAGTATaGTCATTAATGTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: VCSAHSTHGNMLESSHHILMLPV*SLMLRC
Trigger: ACATCTCAACATTAATGAGCATACTGGAAGCATAAG...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTCTTATGCTTCCAGTATaGTCATTAATGTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSALMLPV*SLMLRC
Trigger: ACATCTCAACATTAATGAGCATACTGGAAGCATAAG...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR GCA 90 bp CAAAAGGTATATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGCACAGGTTTGCACGATaGCACTTTCTCACTGATAGA +
Preference number: 4 (lower is better)
Translates to: QKVYTPFTVHKMHLSCKLHRFAR*HFLTDR
Trigger: TCTATCAGTGAGAAAGTGGCATCGTGCAAACCTGTG...CAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTCACAGGTTTGCACGATaGCACTTTCTCACTGATAGA +
Preference number: 4 (lower is better)
Translates to: TLDTSLMILMLAALQLMFHRFAR*HFLTDR
Trigger: TCTATCAGTGAGAAAGTGGCATCGTGCAAACCTGTG...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp CTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGCACAGGTTTGCACGATaGCACTTTCTCACTGATAGA +
Preference number: 4 (lower is better)
Translates to: LQLMFIVMQQKTLLNCTPHRFAR*HFLTDR
Trigger: TCTATCAGTGAGAAAGTGGCATCGTGCAAACCTGTG...CGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp CTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTATCCACAGGTTTGCACGATaGCACTTTCTCACTGATAGA +
Preference number: 4 (lower is better)
Translates to: LDTSLMILMLAALQLMFIHRFAR*HFLTDR
Trigger: TCTATCAGTGAGAAAGTGGCATCGTGCAAACCTGTG...GATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGTACCTTGTGCTTTCATaGAAATTTAGGGACCAAACT +
Preference number: 4 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQYLVLS*KFRDQT
Trigger: AGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTA...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CCA 90 bp CAAAAGGTATATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGCAAAGAGAATGCCAATaGGTCCAGCTTTATGGGAGT +
Preference number: 4 (lower is better)
Translates to: QKVYTPFTVHKMHLSCKLQRECQ*VQLYGS
Trigger: ACTCCCATAAAGCTGGACCCATTGGCATTCTCTTTG...CAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTTCTCAAAGTATCTTCTaGGAAATCACGCGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: TLDTSLMILMLAALQLMFSQSIF*EITRLY
Trigger: GTACAGCCGCGTGATTTCCCAGAAGATACTTTGAGA...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000539194.6
CDS-3UTR CCA 90 bp ACTATCATAACTAATACTGCAAAACACCTCCCTCTTCATGATGATTTCTTCACAGGGTTGCTATTCAGCTaGCTTAGAGACAATCTGATG +
Preference number: 4 (lower is better)
Translates to: TIITNTAKHLPLHDDFFTGLLFS*LRDNLM
Trigger: CATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCC...TGTGAAGAAATCATCATGAAGAGGGAGGTGTTTTGCAGTATTAGTTATGATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS-3UTR CCA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCTTTCCAAGTGGAACATaGCCAATCTTTGATAAAGTA +
Preference number: 4 (lower is better)
Translates to: LLDLESPCRPRNYQKSVIFPSGT*PIFDKV
Trigger: TACTTTATCAAAGATTGGCCATGTTCCACTTGGAAA...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGTTTGAATTTGTCAGATaGAGTTACGCAGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQFEFVR*SYAGFS
Trigger: AGAGAAACCTGCGTAACTCCATCTGACAAATTCAAA...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGACTGTACACCGTAATTaGCATCTGTTAAAACAACTC +
Preference number: 4 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQTVHRN*HLLKQL
Trigger: GAGTTGTTTTAACAGATGCCAATTACGGTGTACAGT...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR CAA 72 bp GAATTGATACTGTTCAGATCTGTGAACGCCTTGTCCTaGGTAGTGTTGTACTGGGCCAATATATATTTGATT +
Preference number: 4 (lower is better)
Translates to: ELILFRSVNALS*VVLYWANIYLI
Trigger: AATCAAATATATATTGGCCCAGTACAACACTACCAAGGACAAGGCGTTCACAGATCTGAACAGTATCAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR TCA 90 bp ATATTTACCTTGTGCTTTCATGCAAATTTAGGGACCAAACTCAAAGGTTTCATCAAGCACTGGATCTGCTaGATCTTCAGTTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: IFTLCFHANLGTKLKGFIKHWIC*IFSFLS
Trigger: AGACAGAAAACTGAAGATTCAGCAGATCCAGTGCTT...GATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp CTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGAAGCACTGGATCTGCTaGATCTTCAGTTTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LQLMFIVMQQKTLLNCTPKHWIC*IFSFLS
Trigger: AGACAGAAAACTGAAGATTCAGCAGATCCAGTGCTT...CGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCGGGCCAATATATATTTaGTTTGCTCTGGAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFGPIYI*FALEFH
Trigger: ATGAAACTCCAGAGCAAATCAAATATATATTGGCCC...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTACATTGTCGATATCTaGACCAATGGAATTCAAGAC +
Preference number: 4 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIYIVDI*TNGIQD
Trigger: GTCTTGAATTCCATTGGTTCAGATATCGACAATGTA...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCATAAACAGAGAATGCTaGGAGTATATCCTGAATAGG +
Preference number: 4 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIINREC*EYILNR
Trigger: CCTATTCAGGATATACTCTCAGCATTCTCTGTTTAT...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCATGAAAATCTCTGCGTaGAGAATATGCTGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIMKISA*RICCRF
Trigger: AAACCTACAGCATATTCTTCACGCAGAGATTTTCAT...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTACGCAGGTTTCTCTATaGTTGCTTTTGCATGCCATT +
Preference number: 4 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESTQVSL*LLLHAI
Trigger: AATGGCATGCAAAAGCAATCATAGAGAAACCTGCGT...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGAAACAACTCCACTTTTaGACGAACAGCATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RTLDTSLMILMLAALQLMKQLHF*TNSISL
Trigger: GAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTT...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCCCAGTTCTTCATTGCTaGTCACTTTTGATAATGACA +
Preference number: 4 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFPVLHC*SLLIMT
Trigger: TGTCATTATCAAAAGTGATCAGCAATGAAGAACTGG...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR GCA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACAGGTCTCATAATTTGTTaGAGGCAATTCATAATTCCA +
Preference number: 4 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTGLIIC*RQFIIP
Trigger: TGGAATTATGAATTGCCTGCAACAAATTATGAGACC...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTTACCTGGTGATTTaGCACAAAACCATAGAAGAT +
Preference number: 4 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKISYLVI*HKTIED
Trigger: ATCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGA...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCATGATTGCTTTTGCATaGCATTTCCAAGTGGAACAT +
Preference number: 4 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFMIAFA*HFQVEH
Trigger: ATGTTCCACTTGGAAATGGCATGCAAAAGCAATCAT...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGCAAAGGTTTCATCCATaGTGGACACCAGATCTAAGA +
Preference number: 4 (lower is better)
Translates to: SCTPINVYRNATENSVKLQRFHP*WTPDLR
Trigger: TCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTG...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CAAAAGGTATATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTTCCTCAAATTTCCTaGGGGCAAACTGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: QKVYTPFTVHKMHLSCKLVPQIS*GQTVCF
Trigger: AAAGCAAACAGTTTGCCCCCAGGAAATTTGAGGAAC...CAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTATCTTTCCTGTAAACTaGTGTGTGTTCAGCACACTC +
Preference number: 4 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESIFPVN*CVFSTL
Trigger: GAGTGTGCTGAACACACACCAGTTTACAGGAAAGAT...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGATCTTTCCTGTAAACTaGTGTGTGTTCAGCACACTC +
Preference number: 4 (lower is better)
Translates to: LQLMFIVMQQKTLLNCTPIFPVN*CVFSTL
Trigger: GAGTGTGCTGAACACACACCAGTTTACAGGAAAGAT...CGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTAGGTTTCATCCATGCTaGACACCAGATCTAAGAATT +
Preference number: 4 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSRFHPC*TPDLRI
Trigger: AATTCTTAGATCTGGTGTCCAGCATGGATGAAACCT...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR TCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTAAACAACTCCACTTTTaGACGAACAGCATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFKQLHF*TNSISL
Trigger: GAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTT...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTCTAGTTCAAAGAGAATaGCAATGGGTCCAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFLVQRE*QWVQLY
Trigger: ATAAAGCTGGACCCATTGGCATTCTCTTTGAACTAG...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp CTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTATCCTTGAAATTGCTATCTaGCAGTTTCCGACTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LDTSLMILMLAALQLMFILEIAI*QFPTPF
Trigger: AAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAG...GATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTGACTTTCCAATTCACTaGTTATGCTTCCAGTATGCT +
Preference number: 4 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESDFPIH*LCFQYA
Trigger: AGCATACTGGAAGCATAAGCAGTGAATTGGAAAGTC...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGACTTTCCAATTCACTaGTTATGCTTCCAGTATGCT +
Preference number: 4 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFDFPIH*LCFQYA
Trigger: AGCATACTGGAAGCATAAGCAGTGAATTGGAAAGTC...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTGACTTTCCAATTCACTaGTTATGCTTCCAGTATGCT +
Preference number: 4 (lower is better)
Translates to: TLDTSLMILMLAALQLMFDFPIH*LCFQYA
Trigger: AGCATACTGGAAGCATAAGCAGTGAATTGGAAAGTC...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTACCTTGTGCTTTCATaGAAATTTAGGGACCAAACT +
Preference number: 4 (lower is better)
Translates to: RTLDTSLMILMLAALQLMYLVLS*KFRDQT
Trigger: AGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTA...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTACTGTACACCGTAATTaGCATCTGTTAAAACAACTC +
Preference number: 4 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSTVHRN*HLLKQL
Trigger: GAGTTGTTTTAACAGATGCCAATTACGGTGTACAGT...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTAGGTTTCATCCATGCTaGACACCAGATCTAAGAATT +
Preference number: 4 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFRFHPC*TPDLRI
Trigger: AATTCTTAGATCTGGTGTCCAGCATGGATGAAACCT...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTTACATTGTCGATATCTaGACCAATGGAATTCAAGAC +
Preference number: 4 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFYIVDI*TNGIQD
Trigger: GTCTTGAATTCCATTGGTTCAGATATCGACAATGTA...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTTACATTGTCGATATCTaGACCAATGGAATTCAAGAC +
Preference number: 4 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESYIVDI*TNGIQD
Trigger: GTCTTGAATTCCATTGGTTCAGATATCGACAATGTA...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTATAAACAGAGAATGCTaGGAGTATATCCTGAATAGG +
Preference number: 4 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESINREC*EYILNR
Trigger: CCTATTCAGGATATACTCTCAGCATTCTCTGTTTAT...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp CTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGCCATGGACTATAACGTaGTTGTGTTCATTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: LQLMFIVMQQKTLLNCTPPWTIT*LCSFLK
Trigger: CTTTAAGAATGAACACAATCACGTTATAGTCCATGG...CGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR TCA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCTCTCTCTCTCTCTTTTaGATTTGTCAGATGGAGTTA +
Preference number: 4 (lower is better)
Translates to: NVYRNATENSVKLYTVIGSLSLF*ICQMEL
Trigger: TAACTCCATCTGACAAATTCAAAAGAGAGAGAGAGA...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGGGTCTCATAATTTGTTaGAGGCAATTCATAATTCCA +
Preference number: 4 (lower is better)
Translates to: RTLDTSLMILMLAALQLMGLIIC*RQFIIP
Trigger: TGGAATTATGAATTGCCTGCAACAAATTATGAGACC...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTCTTACCTGGTGATTTaGCACAAAACCATAGAAGAT +
Preference number: 4 (lower is better)
Translates to: SCTPINVYRNATENSVKLSYLVI*HKTIED
Trigger: ATCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGA...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp CTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTCTTACCTGGTGATTTaGCACAAAACCATAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LQLMFIVMQQKTLLNCTPSYLVI*HKTIED
Trigger: ATCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGA...CGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp CTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTATCTCTTACCTGGTGATTTaGCACAAAACCATAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LDTSLMILMLAALQLMFISYLVI*HKTIED
Trigger: ATCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGA...GATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGATGATTGCTTTTGCATaGCATTTCCAAGTGGAACAT +
Preference number: 4 (lower is better)
Translates to: SCTPINVYRNATENSVKLMIAFA*HFQVEH
Trigger: ATGTTCCACTTGGAAATGGCATGCAAAAGCAATCAT...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACCTTGTGCTTTCATaGAAATTTAGGGACCAAACT +
Preference number: 4 (lower is better)
Translates to: SCTPINVYRNATENSVKLYLVLS*KFRDQT
Trigger: AGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTA...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CCA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTTTTCCAAGTGGAACATaGCCAATCTTTGATAAAGTA +
Preference number: 4 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSFPSGT*PIFDKV
Trigger: TACTTTATCAAAGATTGGCCATGTTCCACTTGGAAA...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CCA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTTTTGAATTTGTCAGATaGAGTTACGCAGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFFEFVR*SYAGFS
Trigger: AGAGAAACCTGCGTAACTCCATCTGACAAATTCAAA...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp CAAAAGGTATATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGTTTGAATTTGTCAGATaGAGTTACGCAGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QKVYTPFTVHKMHLSCKLFEFVR*SYAGFS
Trigger: AGAGAAACCTGCGTAACTCCATCTGACAAATTCAAA...CAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTACTGTACACCGTAATTaGCATCTGTTAAAACAACTC +
Preference number: 4 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESTVHRN*HLLKQL
Trigger: GAGTTGTTTTAACAGATGCCAATTACGGTGTACAGT...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CCA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTACTGTACACCGTAATTaGCATCTGTTAAAACAACTC +
Preference number: 4 (lower is better)
Translates to: TLDTSLMILMLAALQLMFTVHRN*HLLKQL
Trigger: GAGTTGTTTTAACAGATGCCAATTACGGTGTACAGT...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
3UTR CAA 72 bp AGTTCCTCAAATTTCCTGGGGGCAAACTGTTTGCTTTaGCTTCTAGATCATATGCAAATGATAAAAGATTCA +
Preference number: 4 (lower is better)
Translates to: SSSNFLGANCLL*LLDHMQMIKDS
Trigger: TGAATCTTTTATCATTTGCATATGATCTAGAAGCAAAAGCAAACAGTTTGCCCCCAGGAAATTTGAGGAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR GCA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCCTTATGCTTCCAGTATaGTCATTAATGTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: NVYRNATENSVKLYTVIGLMLPV*SLMLRC
Trigger: ACATCTCAACATTAATGAGCATACTGGAAGCATAAG...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR GCA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTCAAATGAATCAGAACTaGAATCTGCACATGAAAAGA +
Preference number: 4 (lower is better)
Translates to: TLDTSLMILMLAALQLMFQMNQN*NLHMKR
Trigger: TCTTTTCATGTGCAGATTGCAGTTCTGATTCATTTG...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
CDS-3UTR CCA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTTTTCCAAGTGGAACATaGCCAATCTTTGATAAAGTA +
Preference number: 4 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESFPSGT*PIFDKV
Trigger: TACTTTATCAAAGATTGGCCATGTTCCACTTGGAAA...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS GCA 90 bp GGTCATTCACTCAAGGCACCATCCCGTGCACCCGGCTCCCGCTCCTaGTCCCGCCCTAGTCACCGCTGCCGCCGCCCTTCCCTTAGCTCG +
Preference number: 5 (lower is better)
Translates to: GHSLKAPSRAPGSRS*SRPSHRCRRPSLSS
Trigger: CGAGCTAAGGGAAGGGCGGCGGCAGCGGTGACTAGGGCGGGAGCAGGAGCGGGAGCCGGGTGCACGGGATGGTGCCTTGAGTGAATGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508167.5
CDS CCA 90 bp GGGCTCCTCGGTCACCGTTCTCCCCGAGAGCGAGTCCGAAGTCTCTaGGGCCCCGGTCCAGTTCGCACACTCACCTCCGACTCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: GLLGHRSPRERVRSL*GPGPVRTLTSDSRS
Trigger: GGAGCGGGAGTCGGAGGTGAGTGTGCGAACTGGACCGGGGCCCCAGAGACTTCGGACTCGCTCTCGGGGAGAACGGTGACCGAGGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502501.1
CDS CCA 90 bp CCATCCCTCGGTCACCGTTCTCCCCGAGAGCGAGTCCGAAGTCTCTaGGGCCCCGGTCCAGTTCGCACACTCACCTCCGACTCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: PSLGHRSPRERVRSL*GPGPVRTLTSDSRS
Trigger: GGAGCGGGAGTCGGAGGTGAGTGTGCGAACTGGACCGGGGCCCCAGAGACTTCGGACTCGCTCTCGGGGAGAACGGTGACCGAGGGATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508940.1
CDS TCA 90 bp AAGATCGCGAAACCCGAGCCCTGGACGCACTCTGATTGGACCGGCTaGGCTGCTTCGCCACGTAGCCCTGGGGCGCCCACCAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: KIAKPEPWTHSDWTG*AASPRSPGAPTSTW
Trigger: CCAGGTGCTGGTGGGCGCCCCAGGGCTACGTGGCGAAGCAGCTCAGCCGGTCCAATCAGAGTGCGTCCAGGGCTCGGGTTTCGCGATCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS GCA 90 bp CGCGGCGGGAGAGCTGAGAGCATGGCCAGGTGCCGCGTGGGGATCTaGCTCAGTCACTTAAAGATCGCGAAACCCGAGCCCTGGACGCAC +
Preference number: 5 (lower is better)
Translates to: RGGRAESMARCRVGI*LSHLKIAKPEPWTH
Trigger: GTGCGTCCAGGGCTCGGGTTTCGCGATCTTTAAGTGACTGAGGCAGATCCCCACGCGGCACCTGGCCATGCTCTCAGCTCTCCCGCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS CCA 90 bp CGCAGAGCGAACCCGTCCACTCCTCACTGTACACCCCCAGTACAGTaGAAGGAGTGCGCTCAGCCCCGCGCCTGGTCAGCAGATGCCTCT +
Preference number: 5 (lower is better)
Translates to: RRANPSTPHCTPPVQ*KECAQPRAWSADAS
Trigger: AGAGGCATCTGCTGACCAGGCGCGGGGCTGAGCGCACTCCTTCCACTGTACTGGGGGTGTACAGTGAGGAGTGGACGGGTTCGCTCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502501.1
CDS GCA 90 bp CTCAAGGCACCATCCCGCGGCGGGAGAGCTGAGAGCATGGCCAGGTaGCGCGTGGGGATCTGCCTCAGTCACTTAAAGATCGCGAAACCC +
Preference number: 5 (lower is better)
Translates to: LKAPSRGGRAESMAR*RVGICLSHLKIAKP
Trigger: GGGTTTCGCGATCTTTAAGTGACTGAGGCAGATCCCCACGCGGCACCTGGCCATGCTCTCAGCTCTCCCGCCGCGGGATGGTGCCTTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS-3UTR CAA 90 bp GACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCAAGACGCCTCCGGTGTaGGAGACACAGCCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: DQWCRCLGARLSHYVATGKTPPV*ETQPRV
Trigger: CACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTT...GCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS TCA 90 bp CCTGCAGGATCCACCGTGCCTCACTGCAGTGCTGCATCAGACACATaGGGTTGGGGGAGGACATGCACGGAGGACATCAGGGCATCTGCC +
Preference number: 5 (lower is better)
Translates to: PAGSTVPHCSAASDT*GWGRTCTEDIRASA
Trigger: GGCAGATGCCCTGATGTCCTCCGTGCATGTCCTCCCCCAACCTCATGTGTCTGATGCAGCACTGCAGTGAGGCACGGTGGATCCTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS-3UTR CAA 90 bp AGACACAGCCTCGGGTGGTCGGGGTGGCATGCCTGTCATAGCCGCACACGCCACTACGACAGTCGTGGTTaGGCGTTGTACTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: RHSLGWSGWHACHSRTRHYDSRG*ALYSVR
Trigger: CCTGACAGAGTACAACGCCAAACCACGACTGTCGTA...GTGGCGTGTGCGGCTATGACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS TCA 90 bp GGCACACCCTGCCCGACTGTGACTTCAGGTGGATCACAACCCCTCTaGACCTGCAGGATCCACCGTGCCTCACTGCAGTGCTGCATCAGA +
Preference number: 5 (lower is better)
Translates to: GTPCPTVTSGGSQPL*TCRIHRASLQCCIR
Trigger: TCTGATGCAGCACTGCAGTGAGGCACGGTGGATCCTGCAGGTTCAGAGGGGTTGTGATCCACCTGAAGTCACAGTCGGGCAGGGTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS GCA 90 bp GCGCCCACCAGCACCTGGACAGCATCCATTTCCTGTAGAGGTGCCTaGTCAACCCCCTGCACTCCCTTCTTGCAACGCTTGCGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: APTSTWTASISCRGA*STPCTPFLQRLRLF
Trigger: AAAGAGGCGCAAGCGTTGCAAGAAGGGAGTGCAGGGGGTTGAGCAGGCACCTCTACAGGAAATGGATGCTGTCCAGGTGCTGGTGGGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS-3UTR CAA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCAAGCACAGAGGGTCATaGAGAGATGACCGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSKHRGS*RDDRRL
Trigger: TAGCCTGCGGTCATCTCTCAATGACCCTCTGTGCTT...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS CCA 90 bp CGGCAGTTTCAACTCTGGCACACCCTGCCCGACTGTGACTTCAGGTaGATCACAACCCCTCTGAACCTGCAGGATCCACCGTGCCTCACT +
Preference number: 5 (lower is better)
Translates to: RQFQLWHTLPDCDFR*ITTPLNLQDPPCLT
Trigger: AGTGAGGCACGGTGGATCCTGCAGGTTCAGAGGGGTTGTGATCCACCTGAAGTCACAGTCGGGCAGGGTGTGCCAGAGTTGAAACTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS-3UTR CAA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAAGACGCCTCCGGTGTaGGAGACACAGCCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: ILKALPRDQWCRCLGARLKTPPV*ETQPRV
Trigger: CACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTT...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS TCA 90 bp TCTGGAAGGTCGGCAGTTTCAACTCTGGCACACCCTGCCCGACTGTaGCTTCAGGTGGATCACAACCCCTCTGAACCTGCAGGATCCACC +
Preference number: 5 (lower is better)
Translates to: SGRSAVSTLAHPARL*LQVDHNPSEPAGST
Trigger: GGTGGATCCTGCAGGTTCAGAGGGGTTGTGATCCACCTGAAGTCACAGTCGGGCAGGGTGTGCCAGAGTTGAAACTGCCGACCTTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS GCA 90 bp GACTTCAGGTGGATCACAACCCCTCTGAACCTGCAGGATCCACCGTaGCTCACTGCAGTGCTGCATCAGACACATGAGGTTGGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: DFRWITTPLNLQDPP*LTAVLHQTHEVGGG
Trigger: TCCTCCCCCAACCTCATGTGTCTGATGCAGCACTGCAGTGAGGCACGGTGGATCCTGCAGGTTCAGAGGGGTTGTGATCCACCTGAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS GCA 90 bp GTGCCTGCTGAGCAGCTTGTTTCACTCATGGCACCATCCCCCAGCTaGTGTGCAGGTCCCTGGCTTATTTCTGTATCCCCAGAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: VPAEQLVSLMAPSPS*CAGPWLISVSPEPG
Trigger: TCCAGGCTCTGGGGATACAGAAATAAGCCAGGGACCTGCACAGCAGCTGGGGGATGGTGCCATGAGTGAAACAAGCTGCTCAGCAGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512304.2
CDS CCA 90 bp GGCAAAGGTGAGCAAAGGGGACCAGGAGGTGGCTGTCCTCTGACCTaGTGGGAAGCCCCAGAAGTCTTGGTCCTGCACATCAATGTCCTT +
Preference number: 5 (lower is better)
Translates to: GKGEQRGPGGGCPLT*WEAPEVLVLHINVL
Trigger: AAGGACATTGATGTGCAGGACCAAGACTTCTGGGGCTTCCCACCAGGTCAGAGGACAGCCACCTCCTGGTCCCCTTTGCTCACCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511270.1
CDS-3UTR CAA 90 bp GGTGTTGGAGACACAGCCTCGGGTGGTCGGGGTGGCATGCCTGTCATAGCCGCATCACCAACAGGGAGATaGCAAAGCATTTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: GVGDTASGGRGGMPVIAASPTGR*QSISSG
Trigger: TCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGA...TGCGGCTATGACAGGCATGCCACCCCGACCACCCGAGGCTGTGTCTCCAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACGTGAACGCCTTGTCCTaGGTAGTGTTGTACTGGGCC +
Preference number: 5 (lower is better)
Translates to: KALPRDQWCRCLGARLSHVNALS*VVLYWA
Trigger: GGCCCAGTACAACACTACCAAGGACAAGGCGTTCAC...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS TCA 90 bp CATATGGCAAAGGTGAGCAAAGGGGACCAGGAGGTGGCTGTCCTCTaGCCTGGTGGGAAGCCCCAGAAGTCTTGGTCCTGCACATCAATG +
Preference number: 5 (lower is better)
Translates to: HMAKVSKGDQEVAVL*PGGKPQKSWSCTSM
Trigger: CATTGATGTGCAGGACCAAGACTTCTGGGGCTTCCCACCAGGTCAGAGGACAGCCACCTCCTGGTCCCCTTTGCTCACCTTTGCCATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511270.1
CDS CCA 90 bp GGGGAGACTAGTGAACTCCATCTGGAAGGTCGGCAGTTTCAACTCTaGCACACCCTGCCCGACTGTGACTTCAGGTGGATCACAACCCCT +
Preference number: 5 (lower is better)
Translates to: GETSELHLEGRQFQL*HTLPDCDFRWITTP
Trigger: AGGGGTTGTGATCCACCTGAAGTCACAGTCGGGCAGGGTGTGCCAGAGTTGAAACTGCCGACCTTCCAGATGGAGTTCACTAGTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS-3UTR CAA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGCACAGAGGGTCATaGAGAGATGACCGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: LGARLSHYVATGVAPGFGKHRGS*RDDRRL
Trigger: TAGCCTGCGGTCATCTCTCAATGACCCTCTGTGCTT...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGGGATTGATAGCCCTGTaGGACCAGGCCATCCAAATC +
Preference number: 5 (lower is better)
Translates to: GARLSHYVATGVAPGFGKGLIAL*DQAIQI
Trigger: GATTTGGATGGCCTGGTCCAACAGGGCTATCAATCC...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGATACGACAGTCGTGGTTaGGCGTTGTACTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: LGARLSHYVATGVAPGFGYDSRG*ALYSVR
Trigger: CCTGACAGAGTACAACGCCAAACCACGACTGTCGTA...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAAAGACGCCTCCGGTGTaGGAGACACAGCCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPKTPPV*ETQPRV
Trigger: CACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTT...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGCGTTGCTCCTGGATTaGGAAAGTCCTTGTAGACCC +
Preference number: 5 (lower is better)
Translates to: CLGARLSHYVATGVAPGFALLLD*ESPCRP
Trigger: GGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS TCA 90 bp AGGGAGCCGAGTACGAGGGCCATAGCTAGCAAGATCCTCCAAACATaGGGTAGAACTTGGTGCCTCCTGCCTCAGAGCTTCTGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: REPSTRAIASKILQT*GRTWCLLPQSFWKP
Trigger: AGGCTTCCAGAAGCTCTGAGGCAGGAGGCACCAAGTTCTACCTCATGTTTGGAGGATCTTGCTAGCTATGGCCCTCGTACTCGGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000508322.1
ENST00000508940.1
ENST00000510224.5
ENST00000513946.2
ENST00000514967.5
ENST00000539194.6
CDS CCA 90 bp AAAGGTGAGCAAAGGGGACCAGGAGGTGGCTGTCCTCTGACCTGGTaGGAAGCCCCAGAAGTCTTGGTCCTGCACATCAATGTCCTTTCA +
Preference number: 5 (lower is better)
Translates to: KGEQRGPGGGCPLTW*EAPEVLVLHINVLS
Trigger: TGAAAGGACATTGATGTGCAGGACCAAGACTTCTGGGGCTTCCCACCAGGTCAGAGGACAGCCACCTCCTGGTCCCCTTTGCTCACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511270.1
CDS-3UTR CAA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGCCTCTTTGGTCTCCTaGATCGCTGTTGCCATGGAC +
Preference number: 5 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLASLVS*IAVAMD
Trigger: GTCCATGGCAACAGCGATCAAGGAGACCAAAGAGGC...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGATTCTCCAACGCCTCTTaGGTCTCCTTGATCGCTGTT +
Preference number: 5 (lower is better)
Translates to: LGARLSHYVATGVAPGFGFSNAS*VSLIAV
Trigger: AACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAA...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCGCGGTGGCCACAGGTTaGCACGATGCCACTTTCTCA +
Preference number: 5 (lower is better)
Translates to: FILKALPRDQWCRCLGARAVATG*HDATFS
Trigger: TGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCGC...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GGTGCCAAACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACGTGATCCTTTCCACTTaGAGTATCCTGATGCTCAAG +
Preference number: 5 (lower is better)
Translates to: GAKPRDQWCRCLGARLSHVILST*SILMLK
Trigger: CTTGAGCATCAGGATACTCAAAGTGGAAAGGATCAC...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTTTGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS TCA 90 bp TTAACACTGGGCATGGCACGTAGTCGGTGTTTAGTAAGTGCCTGCTaGGCAGCTTGTTTCACTCATGGCACCATCCCCCAGCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: LTLGMARSRCLVSAC*AACFTHGTIPQLLC
Trigger: GCACAGCAGCTGGGGGATGGTGCCATGAGTGAAACAAGCTGCTCAGCAGGCACTTACTAAACACCGACTACGTGCCATGCCCAGTGTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512304.2
CDS CCA 90 bp ACAACCAAAAAGGTATACGCCAGGGGGAGACTAGTGAACTCCATCTaGAAGGTCGGCAGTTTCAACTCTGGCACACCCTGCCCGACTGTG +
Preference number: 5 (lower is better)
Translates to: TTKKVYARGRLVNSI*KVGSFNSGTPCPTV
Trigger: CACAGTCGGGCAGGGTGTGCCAGAGTTGAAACTGCCGACCTTCCAGATGGAGTTCACTAGTCTCCCCCTGGCGTATACCTTTTTGGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS-3UTR CAA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCATTTCTCCACCACATTaGTTACAGCAACGACACATA +
Preference number: 5 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSISPPH*LQQRHI
Trigger: TATGTGTCGTTGCTGTAACAAATGTGGTGGAGAAAT...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTTCACCAACAGGGAGATaGCAAAGCATTTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: CLGARLSHYVATGVAPGFSPTGR*QSISSG
Trigger: TCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGA...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTTCTTACCTGGTGATTaGCCACAAAACCATAGAAGA +
Preference number: 5 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSFLPGD*PQNHRR
Trigger: TCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGAA...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGCGCAAGTCCTTGAAATaGCTATCTGCCAGTTTCCGA +
Preference number: 5 (lower is better)
Translates to: GARLSHYVATGVAPGFGKRKSLK*LSASFR
Trigger: TCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCG...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCGTGAACGCCTTGTCCTaGGTAGTGTTGTACTGGGCC +
Preference number: 5 (lower is better)
Translates to: FILKALPRDQWCRCLGARVNALS*VVLYWA
Trigger: GGCCCAGTACAACACTACCAAGGACAAGGCGTTCAC...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTAGATCTGTGAACGCCTaGTCCTTGGTAGTGTTGTAC +
Preference number: 5 (lower is better)
Translates to: CLGARLSHYVATGVAPGFRSVNA*SLVVLY
Trigger: GTACAACACTACCAAGGACAAGGCGTTCACAGATCT...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCAAGCACAGAGGGTCATaGAGAGATGACCGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: SFLKHYPETNGAVALVPAKHRGS*RDDRRL
Trigger: TAGCCTGCGGTCATCTCTCAATGACCCTCTGTGCTT...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTTGTTGCAGGTTTCACTaGATGGATGCACCAAGCACA +
Preference number: 5 (lower is better)
Translates to: CLGARLSHYVATGVAPGFCCRFH*MDAPST
Trigger: TGTGCTTGGTGCATCCATCAAGTGAAACCTGCAACA...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAGTCGTGGTTTGGCGTaGTACTCTGTCAGGTATATC +
Preference number: 5 (lower is better)
Translates to: LGARLSHYVATGVAPGFGSRGLA*YSVRYI
Trigger: GATATACCTGACAGAGTACAACGCCAAACCACGACT...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACAGTCGTGGTTTGGCGTaGTACTCTGTCAGGTATATC +
Preference number: 5 (lower is better)
Translates to: KALPRDQWCRCLGARLSHSRGLA*YSVRYI
Trigger: GATATACCTGACAGAGTACAACGCCAAACCACGACT...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGAAGACGCCTCCGGTGTaGGAGACACAGCCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: LCSFLKHYPETNGAVALVKTPPV*ETQPRV
Trigger: CACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTT...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTTCCATTCCCTGTGCGTaGAAGTATCTTGACGCTTTG +
Preference number: 5 (lower is better)
Translates to: CLGARLSHYVATGVAPGFSIPCA*KYLDAL
Trigger: CAAAGCGTCAAGATACTTCAACGCACAGGGAATGGA...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GGTCACCAGCAGGAGGCAGGGGACGAACTTCATGGCGATACTCCGATAAACTTGGCGTTGCTCCTGGATTaGGAAAGTCCTTGTAGACCC +
Preference number: 5 (lower is better)
Translates to: GHQQEAGDELHGDTPINLALLLD*ESPCRP
Trigger: GGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC...CAAGTTTATCGGAGTATCGCCATGAAGTTCGTCCCCTGCCTCCTGCTGGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS-3UTR CAA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGGGAGGGAGTCATCCTaGAATAGTGATGGACCATGG +
Preference number: 5 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLGRESS*NSDGPW
Trigger: CCATGGTCCATCACTATTCAAGGATGACTCCCTCCC...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS TCA 90 bp GAGGAGCAGGAAGCACTGGATCTGCTGAATCTTCAGTTTTCTGTCTaGGGCTGGCTTGAGGCGAGGGATGCGGAAGAATGTTCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: EEQEALDLLNLQFSV*GWLEARDAEECSPR
Trigger: CCTTGGAGAACATTCTTCCGCATCCCTCGCCTCAAGCCAGCCTCAGACAGAAAACTGAAGATTCAGCAGATCCAGTGCTTCCTGCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000447510.7
ENST00000504842.5
ENST00000505450.5
ENST00000508167.5
ENST00000508322.1
ENST00000508940.1
ENST00000510224.5
ENST00000513108.1
ENST00000513946.2
ENST00000514967.5
ENST00000539194.6
CDS-3UTR CAA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCCTTGGGTCTCATAATTaGTTGCAGGCAATTCATAAT +
Preference number: 5 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSLGSHN*LQAIHN
Trigger: ATTATGAATTGCCTGCAACAAATTATGAGACCCAAG...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGGCCAATATATATTaGATTTGCTCTGGAGTTTCA +
Preference number: 5 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSWANIY*ICSGVS
Trigger: TGAAACTCCAGAGCAAATCAAATATATATTGGCCCA...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCTTGTCCTTGGTAGTGTaGTACTGGGCCAATATATAT +
Preference number: 5 (lower is better)
Translates to: DQWCRCLGARLSHYVATGLSLVV*YWANIY
Trigger: ATATATATTGGCCCAGTACAACACTACCAAGGACAA...GCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTAGAACAGGGATGATGTaGGGTCTCAGTCGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLRTGMM*GLSRSR
Trigger: TCTTGACCGACTGAGACCCAACATCATCCCTGTTCT...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCAGAACAGGGATGATGTaGGGTCTCAGTCGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: SFLKHYPETNGAVALVPARTGMM*GLSRSR
Trigger: TCTTGACCGACTGAGACCCAACATCATCCCTGTTCT...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGTTCTCCAACGCCTCTTaGGTCTCCTTGATCGCTGTT +
Preference number: 5 (lower is better)
Translates to: ILKALPRDQWCRCLGARLFSNAS*VSLIAV
Trigger: AACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAA...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAGCTAAGCTGTGTACTTaGTTGGTGCAAGCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: LGARLSHYVATGVAPGFGAKLCT*LVQALQ
Trigger: TTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGC...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCAAGCACAGAGGGTCATaGAGAGATGACCGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: FILKALPRDQWCRCLGARKHRGS*RDDRRL
Trigger: TAGCCTGCGGTCATCTCTCAATGACCCTCTGTGCTT...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTTGCCTCAGTTCAGGGTaGCTATTCAGCTGGCTTAGA +
Preference number: 5 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLCLSSG*LFSWLR
Trigger: TCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGCA...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGCCTCAGTTCAGGGTaGCTATTCAGCTGGCTTAGA +
Preference number: 5 (lower is better)
Translates to: SFLKHYPETNGAVALVPACLSSG*LFSWLR
Trigger: TCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGCA...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTATAGGAAGGACTCGTaGCTGGTGAATTGTTTTAAT +
Preference number: 5 (lower is better)
Translates to: VPLPWCPPESLRCHWRCSYRKDS*LVNCFN
Trigger: ATTAAAACAATTCACCAGCAACGAGTCCTTCCTATA...GGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp AGGCTGAGCTTCGGCAGCCACTGTGTGTGTAGCAGTGAGAGCCTTCCAGAAGAGGATACTCCGATAAACTaGCTTGCAACTCTGGCACAG +
Preference number: 5 (lower is better)
Translates to: RLSFGSHCVCSSESLPEEDTPIN*LATLAQ
Trigger: CTGTGCCAGAGTTGCAAGCAAGTTTATCGGAGTATC...CTCTTCTGGAAGGCTCTCACTGCTACACACACAGTGGCTGCCGAAGCTCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503884.5
CDS-3UTR CAA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCAGTTTCCGACTCCTTTaGATCCGGGTTCTTACCTGG +
Preference number: 5 (lower is better)
Translates to: FILKALPRDQWCRCLGARSFRLL*IRVLTW
Trigger: CCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAACT...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTCGCAAGTCCTTGAAATaGCTATCTGCCAGTTTCCGA +
Preference number: 5 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLRKSLK*LSASFR
Trigger: TCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCG...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGCGCAAGTCCTTGAAATaGCTATCTGCCAGTTTCCGA +
Preference number: 5 (lower is better)
Translates to: ILKALPRDQWCRCLGARLRKSLK*LSASFR
Trigger: TCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCG...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTAGATCTGTGAACGCCTaGTCCTTGGTAGTGTTGTAC +
Preference number: 5 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLRSVNA*SLVVLY
Trigger: GTACAACACTACCAAGGACAAGGCGTTCACAGATCT...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp AAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACAGAACGTTATTAACGTaGTCAAGTTCTGCATCCACG +
Preference number: 5 (lower is better)
Translates to: KALPRDQWCRCLGARLSHRTLLT*SSSAST
Trigger: CGTGGATGCAGAACTTGACAACGTTAATAACGTTCT...GTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCGGATTGATAGCCCTGTaGGACCAGGCCATCCAAATC +
Preference number: 5 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTGLIAL*DQAIQI
Trigger: GATTTGGATGGCCTGGTCCAACAGGGCTATCAATCC...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTATATCATTAAGGGATaGATAGCCCTGTTGGACCAG +
Preference number: 5 (lower is better)
Translates to: GARLSHYVATGVAPGFGKYIIKG*IALLDQ
Trigger: CTGGTCCAACAGGGCTATCAATCCCTTAATGATATA...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp AAGAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCCAGTTTCCGACTCCTTTTGAAGACGCCTCCGGTGTaGGAGACACAGCCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: KRVRKSLKLLSASFRLLLKTPPV*ETQPRV
Trigger: CACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTT...CAAAAGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp GACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCTATAGGAAGGACTCGTaGCTGGTGAATTGTTTTAAT +
Preference number: 5 (lower is better)
Translates to: DQWCRCLGARLSHYVATGYRKDS*LVNCFN
Trigger: ATTAAAACAATTCACCAGCAACGAGTCCTTCCTATA...GCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCAACGGCACCATTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS CCA 90 bp CTCTCATTTGGCTGCAGGGTCTTAAATGAGCAGGCTTCTCCTATCTaGGCCTTTGTGTTCTCATCTTCTGGGAAATCACGCGGCTGTACC +
Preference number: 5 (lower is better)
Translates to: LSFGCRVLNEQASPI*AFVFSSSGKSRGCT
Trigger: GGTACAGCCGCGTGATTTCCCAGAAGATGAGAACACAAAGGCCCAGATAGGAGAAGCCTGCTCATTTAAGACCCTGCAGCCAAATGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS CCA 90 bp GGAGAAAGACACAAGAATCCTAAAAGCAGCTGTGGCTCCAGCATCTaGGAAGGGAATGGGACAGAAAGTGCCTCCAAGATGGACTCTGTC +
Preference number: 5 (lower is better)
Translates to: GERHKNPKSSCGSSI*EGNGTESASKMDSV
Trigger: GACAGAGTCCATCTTGGAGGCACTTTCTGTCCCATTCCCTTCCCAGATGCTGGAGCCACAGCTGCTTTTAGGATTCTTGTGTCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512304.2
ENST00000514693.5
CDS-3UTR CAA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAATTTCTCCACCACATTaGTTACAGCAACGACACATA +
Preference number: 5 (lower is better)
Translates to: LGARLSHYVATGVAPGFGISPPH*LQQRHI
Trigger: TATGTGTCGTTGCTGTAACAAATGTGGTGGAGAAAT...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTATTTCTCCACCACATTaGTTACAGCAACGACACATA +
Preference number: 5 (lower is better)
Translates to: CLGARLSHYVATGVAPGFISPPH*LQQRHI
Trigger: TATGTGTCGTTGCTGTAACAAATGTGGTGGAGAAAT...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTTCTTACCTGGTGATTaGCCACAAAACCATAGAAGA +
Preference number: 5 (lower is better)
Translates to: GARLSHYVATGVAPGFGKFLPGD*PQNHRR
Trigger: TCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGAA...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGATTCTTACCTGGTGATTaGCCACAAAACCATAGAAGA +
Preference number: 5 (lower is better)
Translates to: LGARLSHYVATGVAPGFGFLPGD*PQNHRR
Trigger: TCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGAA...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAGTTTCCGACTCCTTTaGATCCGGGTTCTTACCTGG +
Preference number: 5 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTSFRLL*IRVLTW
Trigger: CCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAACT...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTTGTCCTTGGTAGTGTaGTACTGGGCCAATATATAT +
Preference number: 5 (lower is better)
Translates to: GARLSHYVATGVAPGFGKLSLVV*YWANIY
Trigger: ATATATATTGGCCCAGTACAACACTACCAAGGACAA...CTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGGTGAACGCCTTGTCCTaGGTAGTGTTGTACTGGGCC +
Preference number: 5 (lower is better)
Translates to: LCSFLKHYPETNGAVALVVNALS*VVLYWA
Trigger: GGCCCAGTACAACACTACCAAGGACAAGGCGTTCAC...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAGAACAGGGATGATGTaGGGTCTCAGTCGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTRTGMM*GLSRSR
Trigger: TCTTGACCGACTGAGACCCAACATCATCCCTGTTCT...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCATGCCTCAGTTCAGGGTaGCTATTCAGCTGGCTTAGA +
Preference number: 5 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPCLSSG*LFSWLR
Trigger: TCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGCA...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAAAAGACGCCTCCGGTGTaGGAGACACAGCCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: WSYAGFSMIAFACHFQVEKTPPV*ETQPRV
Trigger: CACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTT...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTCTGGGGGCAAACTGTTaGCTTTTGCTTCTAGATCAT +
Preference number: 5 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLLGANC*LLLLDH
Trigger: ATGATCTAGAAGCAAAAGCAAACAGTTTGCCCCCAG...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp ATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGGTGATCCTTTCCACTTaGAGTATCCTGATGCTCAAG +
Preference number: 5 (lower is better)
Translates to: ILKALPRDQWCRCLGARLVILST*SILMLK
Trigger: CTTGAGCATCAGGATACTCAAAGTGGAAAGGATCAC...CAGGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTGATCCTTTCCACTTaGAGTATCCTGATGCTCAAG +
Preference number: 5 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLVILST*SILMLK
Trigger: CTTGAGCATCAGGATACTCAAAGTGGAAAGGATCAC...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS TCA 90 bp CCTGCCTCAGTTCAGGGTTGCTATTCAGCTGGCTTAGAGACAATCTaGTGCTGTTGCAGGTTTCACTTGATGGATGCACCAAGCACAGAG +
Preference number: 5 (lower is better)
Translates to: PASVQGCYSAGLETI*CCCRFHLMDAPSTE
Trigger: CTCTGTGCTTGGTGCATCCATCAAGTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502943.1
CDS TCA 90 bp GGCTTCGTTATCCTACCAGCTCTCATTTGGCTGCAGGGTCTTAAATaGGCAGGCTTCTCCTATCTGGGCCTTTGTGTTCTCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GFVILPALIWLQGLK*AGFSYLGLCVLIFW
Trigger: CCAGAAGATGAGAACACAAAGGCCCAGATAGGAGAAGCCTGCTCATTTAAGACCCTGCAGCCAAATGAGAGCTGGTAGGATAACGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS GCA 90 bp GGGACCTTGTTACAACTACAAATTCCTGGGTGTAAGATCAGGCAGTaGACACGGCCTCTAAGTGGCTCTCTGGGTGAACCATCAACAGTA +
Preference number: 5 (lower is better)
Translates to: GTLLQLQIPGCKIRQ*TRPLSGSLGEPSTV
Trigger: TACTGTTGATGGTTCACCCAGAGAGCCACTTAGAGGCCGTGTGCACTGCCTGATCTTACACCCAGGAATTTGTAGTTGTAACAAGGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS CCA 90 bp CAGGTCCCTGGCTTATTTCTGTATCCCCAGAGCCTGGAACACAGTTaGTACTCAATGAAGAATTGCTACCAGCCTGGGCAACATAGAGAG +
Preference number: 5 (lower is better)
Translates to: QVPGLFLYPQSLEHS*YSMKNCYQPGQHRE
Trigger: CTCTCTATGTTGCCCAGGCTGGTAGCAATTCTTCATTGAGTACCAACTGTGTTCCAGGCTCTGGGGATACAGAAATAAGCCAGGGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512304.2
CDS-3UTR CAA 90 bp CTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGATGGGCCAATATATATTaGATTTGCTCTGGAGTTTCA +
Preference number: 5 (lower is better)
Translates to: LGARLSHYVATGVAPGFGWANIY*ICSGVS
Trigger: TGAAACTCCAGAGCAAATCAAATATATATTGGCCCA...TCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAAGATCTGTGAACGCCTaGTCCTTGGTAGTGTTGTAC +
Preference number: 5 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPRSVNA*SLVVLY
Trigger: GTACAACACTACCAAGGACAAGGCGTTCACAGATCT...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CTTAGAGACAATCTGATGCTGTTGCAGGTTTCACTTGATGGATGCACCAAGCACGCCTCTTTGGTCTCCTaGATCGCTGTTGCCATGGAC +
Preference number: 5 (lower is better)
Translates to: LRDNLMLLQVSLDGCTKHASLVS*IAVAMD
Trigger: GTCCATGGCAACAGCGATCAAGGAGACCAAAGAGGC...GTGCTTGGTGCATCCATCAAGTGAAACCTGCAACAGCATCAGATTGTCTCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp CTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGTTCTCCAACGCCTCTTaGGTCTCCTTGATCGCTGTT +
Preference number: 5 (lower is better)
Translates to: LVRLLLSCVLCWCKLFKVFSNAS*VSLIAV
Trigger: AACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAA...CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCGCTAAGCTGTGTACTTaGTTGGTGCAAGCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: FILKALPRDQWCRCLGARAKLCT*LVQALQ
Trigger: TTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGC...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCATGTTGCAGGTTTCACTaGATGGATGCACCAAGCACA +
Preference number: 5 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPCCRFH*MDAPST
Trigger: TGTGCTTGGTGCATCCATCAAGTGAAACCTGCAACA...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAAGTCGTGGTTTGGCGTaGTACTCTGTCAGGTATATC +
Preference number: 5 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPSRGLA*YSVRYI
Trigger: GATATACCTGACAGAGTACAACGCCAAACCACGACT...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp AAGGTGCTGTTCATGTTCTCCAACGCCTCTTTGGTCTCCTTGATCGCTGTTGCCAGTCGTGGTTTGGCGTaGTACTCTGTCAGGTATATC +
Preference number: 5 (lower is better)
Translates to: KVLFMFSNASLVSLIAVASRGLA*YSVRYI
Trigger: GATATACCTGACAGAGTACAACGCCAAACCACGACT...GGCAACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCTGGGGGCAAACTGTTaGCTTTTGCTTCTAGATCAT +
Preference number: 5 (lower is better)
Translates to: FILKALPRDQWCRCLGARLGANC*LLLLDH
Trigger: ATGATCTAGAAGCAAAAGCAAACAGTTTGCCCCCAG...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGCCTTGGTGCCCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTTATAGGAAGGACTCGTaGCTGGTGAATTGTTTTAAT +
Preference number: 5 (lower is better)
Translates to: CLGARLSHYVATGVAPGFYRKDS*LVNCFN
Trigger: ATTAAAACAATTCACCAGCAACGAGTCCTTCCTATA...AAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGGGCACCAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCATCCATTCCCTGTGCGTaGAAGTATCTTGACGCTTTG +
Preference number: 5 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPSIPCA*KYLDAL
Trigger: CAAAGCGTCAAGATACTTCAACGCACAGGGAATGGA...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACGCGGTGGCCACAGGTTaGCACGATGCCACTTTCTCA +
Preference number: 5 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHAVATG*HDATFS
Trigger: TGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCGC...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGGGGAGGGAGTCATCCTaGAATAGTGATGGACCATGG +
Preference number: 5 (lower is better)
Translates to: LCSFLKHYPETNGAVALVGRESS*NSDGPW
Trigger: CCATGGTCCATCACTATTCAAGGATGACTCCCTCCC...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCCAACGCAGTTTCCGACTCCTTTaGATCCGGGTTCTTACCTGG +
Preference number: 5 (lower is better)
Translates to: LCTLLVQALQGAVHVLQRSFRLL*IRVLTW
Trigger: CCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAACT...GCGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAAGAGTTCGCAAGTCCTaGAAATTGCTATCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPRVRKS*KLLSAS
Trigger: ACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCT...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GCTCTTCAAGGTGCTGTTCATGTTCTCCAACGCCTCTTTGGTCTCCTTGATCGCAGAGTTCGCAAGTCCTaGAAATTGCTATCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: ALQGAVHVLQRLFGLLDRRVRKS*KLLSAS
Trigger: ACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCT...GCGATCAAGGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTTGAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp ATGATGATTTCTTCACAGTTTGGCTTACTTCCTTCACACCATGAGGAAGACGCCGTGAACGCCTTGTCCTaGGTAGTGTTGTACTGGGCC +
Preference number: 5 (lower is better)
Translates to: MMISSQFGLLPSHHEEDAVNALS*VVLYWA
Trigger: GGCCCAGTACAACACTACCAAGGACAAGGCGTTCAC...GGCGTCTTCCTCATGGTGTGAAGGAAGTAAGCCAAACTGTGAAGAAATCATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS-3UTR CAA 90 bp CAACAGGGAGATTGCAAAGCATTTCCTCAGGAAGGGCCCATTTTCCTTCTGTCGAGATCTGTGAACGCCTaGTCCTTGGTAGTGTTGTAC +
Preference number: 5 (lower is better)
Translates to: QQGDCKAFPQEGPIFLLSRSVNA*SLVVLY
Trigger: GTACAACACTACCAAGGACAAGGCGTTCACAGATCT...CGACAGAAGGAAAATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACGCCTCTTTGGTCTCCTaGATCGCTGTTGCCATGGAC +
Preference number: 5 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHASLVS*IAVAMD
Trigger: GTCCATGGCAACAGCGATCAAGGAGACCAAAGAGGC...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAGCTGTGTACTTTGTaGGTGCAAGCTCTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTKLCTL*VQALQG
Trigger: ACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTT...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp ACCCTTTTGATACCTGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTTGTTGCAGGTTTCACTaGATGGATGCACCAAGCACA +
Preference number: 5 (lower is better)
Translates to: TLLIPATTVVVWRCTLSGCCRFH*MDAPST
Trigger: TGTGCTTGGTGCATCCATCAAGTGAAACCTGCAACA...ACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATCAAAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAGGATTGATAGCCCTGTaGGACCAGGCCATCCAAATC +
Preference number: 5 (lower is better)
Translates to: LALLLDLESPCRPRNYQKGLIAL*DQAIQI
Trigger: GATTTGGATGGCCTGGTCCAACAGGGCTATCAATCC...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TTGTACTCTGTCAGGTATATCATTAAGGGATTGATAGCCCTGTTGGACCAGGCCGGATTGATAGCCCTGTaGGACCAGGCCATCCAAATC +
Preference number: 5 (lower is better)
Translates to: LYSVRYIIKGLIALLDQAGLIAL*DQAIQI
Trigger: GATTTGGATGGCCTGGTCCAACAGGGCTATCAATCC...GGCCTGGTCCAACAGGGCTATCAATCCCTTAATGATATACCTGACAGAGTACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCTATATCATTAAGGGATaGATAGCCCTGTTGGACCAG +
Preference number: 5 (lower is better)
Translates to: FILKALPRDQWCRCLGARYIIKG*IALLDQ
Trigger: CTGGTCCAACAGGGCTATCAATCCCTTAATGATATA...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp AAAGCATTTCCTCAGGAAGGGCCCATTTTCCTTCTGTCGCTGGTGCATTTCTCCAGTCGTGGTTTGGCGTaGTACTCTGTCAGGTATATC +
Preference number: 5 (lower is better)
Translates to: KAFPQEGPIFLLSLVHFSSRGLA*YSVRYI
Trigger: GATATACCTGACAGAGTACAACGCCAAACCACGACT...GGAGAAATGCACCAGCGACAGAAGGAAAATGGGCCCTTCCTGAGGAAATGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATACGACAGTCGTGGTTaGGCGTTGTACTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: LALLLDLESPCRPRNYQKYDSRG*ALYSVR
Trigger: CCTGACAGAGTACAACGCCAAACCACGACTGTCGTA...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAATTCAAGACCCTTTaGATACCTGCTACGACAGTC +
Preference number: 5 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPEFKTL*IPATTV
Trigger: GACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATTC...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCCAACGCCTCTTTGGTCTCCGAATTCAAGACCCTTTaGATACCTGCTACGACAGTC +
Preference number: 5 (lower is better)
Translates to: WCKLFKVLFMFSNASLVSEFKTL*IPATTV
Trigger: GACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATTC...GGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp TGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCCTGGGGGCAAACTGTTaGCTTTTGCTTCTAGATCAT +
Preference number: 5 (lower is better)
Translates to: CHWRCSWIWKVLVDPETTLGANC*LLLLDH
Trigger: ATGATCTAGAAGCAAAAGCAAACAGTTTGCCCCCAG...GGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCACTGGGGGCAAACTGTTaGCTTTTGCTTCTAGATCAT +
Preference number: 5 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPLGANC*LLLLDH
Trigger: ATGATCTAGAAGCAAAAGCAAACAGTTTGCCCCCAG...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTGCGGTGGCCACAGGTTaGCACGATGCCACTTTCTCA +
Preference number: 5 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIAVATG*HDATFS
Trigger: TGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCGC...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTGCGGTGGCCACAGGTTaGCACGATGCCACTTTCTCA +
Preference number: 5 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSAAVATG*HDATFS
Trigger: TGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCGC...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGTGATCCTTTCCACTTaGAGTATCCTGATGCTCAAG +
Preference number: 5 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPVILST*SILMLK
Trigger: CTTGAGCATCAGGATACTCAAAGTGGAAAGGATCAC...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000447510.7
ENST00000503884.5
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGCTCAGACTAAAAAGTTaGGGTTGGACGGGCACCGGC +
Preference number: 5 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLLRLKS*GWTGTG
Trigger: GCCGGTGCCCGTCCAACCCAAACTTTTTAGTCTGAG...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539194.6
CDS-3UTR CAA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACACCCTGCACTCCCTTCTaGCAACGCTTGCGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTPCTPF*QRLRLF
Trigger: AAAGAGGCGCAAGCGTTGCAAGAAGGGAGTGCAGGG...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS TCA 90 bp TGTCCCTTCAGTGCCCTCCCGCAGCAAAGATGGGAGACAATGACTTaGGATAGACAGCAACTGCAGTTGCACTTCCAGATTTCTTTACAT +
Preference number: 5 (lower is better)
Translates to: CPFSALPQQRWETMT*DRQQLQLHFQISLH
Trigger: ATGTAAAGAAATCTGGAAGTGCAACTGCAGTTGCTGTCTATCTCAAGTCATTGTCTCCCATCTTTGCTGCGGGAGGGCACTGAAGGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513108.1
CDS-3UTR CAA 90 bp TCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCCCTTGGGTCTCATAATTaGTTGCAGGCAATTCATAAT +
Preference number: 5 (lower is better)
Translates to: SFLKHYPETNGAVALVPALGSHN*LQAIHN
Trigger: ATTATGAATTGCCTGCAACAAATTATGAGACCCAAG...GGCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGTCACCAACAGGGAGATaGCAAAGCATTTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: LCSFLKHYPETNGAVALVSPTGR*QSISSG
Trigger: TCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGA...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCTTGTCCTTGGTAGTGTaGTACTGGGCCAATATATAT +
Preference number: 5 (lower is better)
Translates to: FILKALPRDQWCRCLGARLSLVV*YWANIY
Trigger: ATATATATTGGCCCAGTACAACACTACCAAGGACAA...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCGTGAACGCCTTGTCCTaGGTAGTGTTGTACTGGGCC +
Preference number: 5 (lower is better)
Translates to: LLDLESPCRPRNYQKSVIVNALS*VVLYWA
Trigger: GGCCCAGTACAACACTACCAAGGACAAGGCGTTCAC...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTGTGAACGCCTTGTCCTaGGTAGTGTTGTACTGGGCC +
Preference number: 5 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSAVNALS*VVLYWA
Trigger: GGCCCAGTACAACACTACCAAGGACAAGGCGTTCAC...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp AAATCACCAACAGGGAGATTGCAAAGCATTTCCTCAGGAAGGGCCCATTTTCCTAGAACAGGGATGATGTaGGGTCTCAGTCGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: KSPTGRLQSISSGRAHFPRTGMM*GLSRSR
Trigger: TCTTGACCGACTGAGACCCAACATCATCCCTGTTCT...AGGAAAATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTGCCTCTTTGGTCTCCTaGATCGCTGTTGCCATGGAC +
Preference number: 5 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIASLVS*IAVAMD
Trigger: GTCCATGGCAACAGCGATCAAGGAGACCAAAGAGGC...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGTGTTGCAGGTTTCACTaGATGGATGCACCAAGCACA +
Preference number: 5 (lower is better)
Translates to: LCSFLKHYPETNGAVALVCCRFH*MDAPST
Trigger: TGTGCTTGGTGCATCCATCAAGTGAAACCTGCAACA...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TTGATACTGTTCAGATCTGTGAACGCCTTGTCCTTGGTAGTGTTGTACTGGGCCTGTTGCAGGTTTCACTaGATGGATGCACCAAGCACA +
Preference number: 5 (lower is better)
Translates to: LILFRSVNALSLVVLYWACCRFH*MDAPST
Trigger: TGTGCTTGGTGCATCCATCAAGTGAAACCTGCAACA...GGCCCAGTACAACACTACCAAGGACAAGGCGTTCACAGATCTGAACAGTATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATGCCTCAGTTCAGGGTaGCTATTCAGCTGGCTTAGA +
Preference number: 5 (lower is better)
Translates to: LALLLDLESPCRPRNYQKCLSSG*LFSWLR
Trigger: TCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGCA...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp AAGGTGCTGTTCATGTTCTCCAACGCCTCTTTGGTCTCCTTGATCGCTGTTGCCAGAACGTTATTAACGTaGTCAAGTTCTGCATCCACG +
Preference number: 5 (lower is better)
Translates to: KVLFMFSNASLVSLIAVARTLLT*SSSAST
Trigger: CGTGGATGCAGAACTTGACAACGTTAATAACGTTCT...GGCAACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAACATGAACAGCACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp ATTCAAGAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCCAGTTTCCGACTCCTTACGACAGTCGTGGTTaGGCGTTGTACTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: IQESSQVLEIAICQFPTPYDSRG*ALYSVR
Trigger: CCTGACAGAGTACAACGCCAAACCACGACTGTCGTA...AGGAGTCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCTCTTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp TTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCCGCGCAGTCACTGTAAACTaGTTCAAAAGTGAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: FILKALPRDQWCRCLGARAVTVN*FKSELH
Trigger: ATGAAGCTCACTTTTGAACAAGTTTACAGTGACTGC...GCGGGCACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CCGCCTGAGTCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGCAAACTGTTTGCTTTaGCTTCTAGATCATATGCAA +
Preference number: 5 (lower is better)
Translates to: PPESLRCHWRCSWIWKVLANCLL*LLDHMQ
Trigger: TTGCATATGATCTAGAAGCAAAAGCAAACAGTTTGC...AAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGACTCAGGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp ATCTGTCCTAAGAACGTTATTAACGTTGTCAAGTTCTGCATCCACGGGTGGAAGAGGCAGGAGGATCACTaGTGTGCTGAGATAACCTCC +
Preference number: 5 (lower is better)
Translates to: ICPKNVINVVKFCIHGWKRQEDH*CAEITS
Trigger: GGAGGTTATCTCAGCACACAAGTGATCCTCCTGCCT...CTTCCACCCGTGGATGCAGAACTTGACAACGTTAATAACGTTCTTAGGACAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS-3UTR CAA 90 bp CTGGTCAGACTGCTGCTAAGCTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGAGCTTTATGGGAGTCTaGGGTCTCATAATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: LVRLLLSCVLCWCKLFKVSFMGV*GLIICC
Trigger: GCAACAAATTATGAGACCCAAGACTCCCATAAAGCT...CACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGCAGCAGTCTGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR CAA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTAGTTTCCGACTCCTTTaGATCCGGGTTCTTACCTGG +
Preference number: 5 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSSFRLL*IRVLTW
Trigger: CCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAACT...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGGCTTAGAGACAATCTGATGCTGTTGCAGGTTTCACTTGATGGATGCACCAAGCGCAAGTCCTTGAAATaGCTATCTGCCAGTTTCCGA +
Preference number: 5 (lower is better)
Translates to: WLRDNLMLLQVSLDGCTKRKSLK*LSASFR
Trigger: TCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCG...CTTGGTGCATCCATCAAGTGAAACCTGCAACAGCATCAGATTGTCTCTAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGCCTCCTAGCACTGAATaGATACTGTTCAGATCTGTG +
Preference number: 5 (lower is better)
Translates to: LCSFLKHYPETNGAVALVPPSTE*ILFRSV
Trigger: CACAGATCTGAACAGTATCAATTCAGTGCTAGGAGG...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACTTCTCCAACGCCTCTTaGGTCTCCTTGATCGCTGTT +
Preference number: 5 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHFSNAS*VSLIAV
Trigger: AACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAA...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGGCTAAGCTGTGTACTTaGTTGGTGCAAGCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: LCSFLKHYPETNGAVALVAKLCT*LVQALQ
Trigger: TTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGC...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TTGCTCTGGAGTTTCATTCAAGAGAGTTCGCAAGTCCTTGAAATTGCTATCTGCAAGCACAGAGGGTCATaGAGAGATGACCGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: LLWSFIQESSQVLEIAICKHRGS*RDDRRL
Trigger: TAGCCTGCGGTCATCTCTCAATGACCCTCTGTGCTT...GCAGATAGCAATTTCAAGGACTTGCGAACTCTCTTGAATGAAACTCCAGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAGGATTGATAGCCCTGTaGGACCAGGCCATCCAAATC +
Preference number: 5 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPGLIAL*DQAIQI
Trigger: GATTTGGATGGCCTGGTCCAACAGGGCTATCAATCC...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGAAGACGCCTCCGGTGTaGGAGACACAGCCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: SCTPINVYRNATENSVKLKTPPV*ETQPRV
Trigger: CACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTT...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTAAGACGCCTCCGGTGTaGGAGACACAGCCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFKTPPV*ETQPRV
Trigger: CACCCGAGGCTGTGTCTCCAACACCGGAGGCGTCTT...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAAGCGGTGGCCACAGGTTaGCACGATGCCACTTTCTCA +
Preference number: 5 (lower is better)
Translates to: STFERTAFLSQDLSLSFEAVATG*HDATFS
Trigger: TGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCGC...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGGTGATCCTTTCCACTTaGAGTATCCTGATGCTCAAG +
Preference number: 5 (lower is better)
Translates to: LCSFLKHYPETNGAVALVVILST*SILMLK
Trigger: CTTGAGCATCAGGATACTCAAAGTGGAAAGGATCAC...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACAGGGAGGGAGTCATCCTaGAATAGTGATGGACCATGG +
Preference number: 5 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTGRESS*NSDGPW
Trigger: CCATGGTCCATCACTATTCAAGGATGACTCCCTCCC...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CAA 90 bp CCACCCAGCCACCAGTATGAATCATACTCTTCCAATGTAGGTAAATTTCTGTGGTCACCAACAGGGAGATaGCAAAGCATTTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: PPSHQYESYSSNVGKFLWSPTGR*QSISSG
Trigger: TCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGA...CCACAGAAATTTACCTACATTGGAAGAGTATGATTCATACTGGTGGCTGGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTAGTTTCCGACTCCTTTaGATCCGGGTTCTTACCTGG +
Preference number: 5 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSASFRLL*IRVLTW
Trigger: CCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAACT...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TCACTACGTTGCCACTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCATGGGCCAATATATATTaGATTTGCTCTGGAGTTTCA +
Preference number: 5 (lower is better)
Translates to: SLRCHWRCSWIWKVLVDPWANIY*ICSGVS
Trigger: TGAAACTCCAGAGCAAATCAAATATATATTGGCCCA...TGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAGTGGCAACGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TTGTACTCTGTCAGGTATATCATTAAGGGATTGATAGCCCTGTTGGACCAGGCCCCTCCTAGCACTGAATaGATACTGTTCAGATCTGTG +
Preference number: 5 (lower is better)
Translates to: LYSVRYIIKGLIALLDQAPPSTE*ILFRSV
Trigger: CACAGATCTGAACAGTATCAATTCAGTGCTAGGAGG...GGCCTGGTCCAACAGGGCTATCAATCCCTTAATGATATACCTGACAGAGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAATTCTCCAACGCCTCTTaGGTCTCCTTGATCGCTGTT +
Preference number: 5 (lower is better)
Translates to: WSYAGFSMIAFACHFQVEFSNAS*VSLIAV
Trigger: AACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAA...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAGCTAAGCTGTGTACTTaGTTGGTGCAAGCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: LALLLDLESPCRPRNYQKAKLCT*LVQALQ
Trigger: TTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGC...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGGACCAGGCCATCCAAATCTGTCCTAAGAACGTTATTAACGTTGTCAAGTTCTTGCCTCAGTTCAGGGTaGCTATTCAGCTGGCTTAGA +
Preference number: 5 (lower is better)
Translates to: WTRPSKSVLRTLLTLSSSCLSSG*LFSWLR
Trigger: TCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGCA...AGAACTTGACAACGTTAATAACGTTCTTAGGACAGATTTGGATGGCCTGGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACATGCCTCAGTTCAGGGTaGCTATTCAGCTGGCTTAGA +
Preference number: 5 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTCLSSG*LFSWLR
Trigger: TCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGCA...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CAA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGGGATTGATAGCCCTGTaGGACCAGGCCATCCAAATC +
Preference number: 5 (lower is better)
Translates to: MDYNVIVFILKALPRDQWGLIAL*DQAIQI
Trigger: GATTTGGATGGCCTGGTCCAACAGGGCTATCAATCC...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTAGTCGTGGTTTGGCGTaGTACTCTGTCAGGTATATC +
Preference number: 5 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSSRGLA*YSVRYI
Trigger: GATATACCTGACAGAGTACAACGCCAAACCACGACT...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACATACGACAGTCGTGGTTaGGCGTTGTACTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTYDSRG*ALYSVR
Trigger: CCTGACAGAGTACAACGCCAAACCACGACTGTCGTA...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTCCATTCCCTGTGCGTaGAAGTATCTTGACGCTTTG +
Preference number: 5 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLSIPCA*KYLDAL
Trigger: CAAAGCGTCAAGATACTTCAACGCACAGGGAATGGA...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp ATGATGATTTCTTCACAGTTTGGCTTACTTCCTTCACACCATGAGGAAGACGCCAGGCAAAAATTCCCCTaGTCCTCTTTCTGGCTTCGT +
Preference number: 5 (lower is better)
Translates to: MMISSQFGLLPSHHEEDARQKFP*SSFWLR
Trigger: ACGAAGCCAGAAAGAGGACAAGGGGAATTTTTGCCT...GGCGTCTTCCTCATGGTGTGAAGGAAGTAAGCCAAACTGTGAAGAAATCATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS GCA 90 bp GCGGCTGTACCACATAGAGAAAGATATGCACTAGTTCAAAGAGAATaGCAATGGGTCCAGCTTTATGGGAGTCTTGGGTCTCATAATTTG +
Preference number: 5 (lower is better)
Translates to: AAVPHRERYALVQRE*QWVQLYGSLGSHNL
Trigger: CAAATTATGAGACCCAAGACTCCCATAAAGCTGGACCCATTGGCATTCTCTTTGAACTAGTGCATATCTTTCTCTATGTGGTACAGCCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
ENST00000675377.1
ENST00000675613.1
CDS-3UTR CAA 90 bp CTGGCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAAAGCTTTATGGGAGTCTaGGGTCTCATAATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: LALLLDLESPCRPRNYQKSFMGV*GLIICC
Trigger: GCAACAAATTATGAGACCCAAGACTCCCATAAAGCT...TTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGCCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCATCACCAACAGGGAGATaGCAAAGCATTTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPSPTGR*QSISSG
Trigger: TCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGA...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACAAGTTTCCGACTCCTTTaGATCCGGGTTCTTACCTGG +
Preference number: 5 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTSFRLL*IRVLTW
Trigger: CCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAACT...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCACGCAAGTCCTTGAAATaGCTATCTGCCAGTTTCCGA +
Preference number: 5 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPRKSLK*LSASFR
Trigger: TCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCG...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTCGCAAGTCCTTGAAATaGCTATCTGCCAGTTTCCGA +
Preference number: 5 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSARKSLK*LSASFR
Trigger: TCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCG...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAACGCAAGTCCTTGAAATaGCTATCTGCCAGTTTCCGA +
Preference number: 5 (lower is better)
Translates to: WSYAGFSMIAFACHFQVERKSLK*LSASFR
Trigger: TCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCG...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CTGTGTACTTTGTTGGTGCAAGCTCTTCAAGGTGCTGTTCATGTTCTCCAACGCTTGTCCTTGGTAGTGTaGTACTGGGCCAATATATAT +
Preference number: 5 (lower is better)
Translates to: LCTLLVQALQGAVHVLQRLSLVV*YWANIY
Trigger: ATATATATTGGCCCAGTACAACACTACCAAGGACAA...GCGTTGGAGAACATGAACAGCACCTTGAAGAGCTTGCACCAACAAAGTACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTGTGAACGCCTTGTCCTaGGTAGTGTTGTACTGGGCC +
Preference number: 5 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSVNALS*VVLYWA
Trigger: GGCCCAGTACAACACTACCAAGGACAAGGCGTTCAC...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CAA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGGTGAACGCCTTGTCCTaGGTAGTGTTGTACTGGGCC +
Preference number: 5 (lower is better)
Translates to: RTLDTSLMILMLAALQLMVNALS*VVLYWA
Trigger: GGCCCAGTACAACACTACCAAGGACAAGGCGTTCAC...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTAGATCTGTGAACGCCTaGTCCTTGGTAGTGTTGTAC +
Preference number: 5 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIRSVNA*SLVVLY
Trigger: GTACAACACTACCAAGGACAAGGCGTTCACAGATCT...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTAGATCTGTGAACGCCTaGTCCTTGGTAGTGTTGTAC +
Preference number: 5 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSARSVNA*SLVVLY
Trigger: GTACAACACTACCAAGGACAAGGCGTTCACAGATCT...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACAAGAACAGGGATGATGTaGGGTCTCAGTCGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTRTGMM*GLSRSR
Trigger: TCTTGACCGACTGAGACCCAACATCATCCCTGTTCT...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGGCCTCTTTGGTCTCCTaGATCGCTGTTGCCATGGAC +
Preference number: 5 (lower is better)
Translates to: RTLDTSLMILMLAALQLMASLVS*IAVAMD
Trigger: GTCCATGGCAACAGCGATCAAGGAGACCAAAGAGGC...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTTCTCCAACGCCTCTTaGGTCTCCTTGATCGCTGTT +
Preference number: 5 (lower is better)
Translates to: MDYNVIVFILKALPRDQWFSNAS*VSLIAV
Trigger: AACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAA...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CCACCCAGCCACCAGTATGAATCATACTCTTCCAATGTAGGTAAATTTCTGTGGGCTAAGCTGTGTACTTaGTTGGTGCAAGCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: PPSHQYESYSSNVGKFLWAKLCT*LVQALQ
Trigger: TTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGC...CCACAGAAATTTACCTACATTGGAAGAGTATGATTCATACTGGTGGCTGGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCTCAGTTCAGGGTaGCTATTCAGCTGGCTTAGA +
Preference number: 5 (lower is better)
Translates to: MDYNVIVFILKALPRDQWCLSSG*LFSWLR
Trigger: TCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGCA...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCGGATTGATAGCCCTGTaGGACCAGGCCATCCAAATC +
Preference number: 5 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIGLIAL*DQAIQI
Trigger: GATTTGGATGGCCTGGTCCAACAGGGCTATCAATCC...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp GATACCTGCTACGACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTTATATCATTAAGGGATaGATAGCCCTGTTGGACCAG +
Preference number: 5 (lower is better)
Translates to: DTCYDSRGLALYSVRYIIYIIKG*IALLDQ
Trigger: CTGGTCCAACAGGGCTATCAATCCCTTAATGATATA...AATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTCGTAGCAGGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAAAGTCGTGGTTTGGCGTaGTACTCTGTCAGGTATATC +
Preference number: 5 (lower is better)
Translates to: WSYAGFSMIAFACHFQVESRGLA*YSVRYI
Trigger: GATATACCTGACAGAGTACAACGCCAAACCACGACT...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATACGACAGTCGTGGTTaGGCGTTGTACTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: STFERTAFLSQDLSLSFEYDSRG*ALYSVR
Trigger: CCTGACAGAGTACAACGCCAAACCACGACTGTCGTA...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TCTGAACCAATGGAATTCAAGACCCTTTTGATACCTGCTACGACAGTCGTGGTTGAATTCAAGACCCTTTaGATACCTGCTACGACAGTC +
Preference number: 5 (lower is better)
Translates to: SEPMEFKTLLIPATTVVVEFKTL*IPATTV
Trigger: GACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATTC...AACCACGACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATTCCATTGGTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTTCCATTCCCTGTGCGTaGAAGTATCTTGACGCTTTG +
Preference number: 5 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSASIPCA*KYLDAL
Trigger: CAAAGCGTCAAGATACTTCAACGCACAGGGAATGGA...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTGCGGTGGCCACAGGTTaGCACGATGCCACTTTCTCA +
Preference number: 5 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESAVATG*HDATFS
Trigger: TGAGAAAGTGGCATCGTGCAAACCTGTGGCCACCGC...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAAGCGTTGCTCCTGGATTaGGAAAGTCCTTGTAGACCC +
Preference number: 5 (lower is better)
Translates to: STFERTAFLSQDLSLSFEALLLD*ESPCRP
Trigger: GGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCGCGTTGCTCCTGGATTaGGAAAGTCCTTGTAGACCC +
Preference number: 5 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFALLLD*ESPCRP
Trigger: GGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTAGAGTTCGCAAGTCCTaGAAATTGCTATCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSARVRKS*KLLSAS
Trigger: ACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCT...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGAGTTCGCAAGTCCTaGAAATTGCTATCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPRVRKS*KLLSAS
Trigger: ACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCT...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp GACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTAAGGGATTGATAAGAGTTCGCAAGTCCTaGAAATTGCTATCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: DSRGLALYSVRYIIKGLIRVRKS*KLLSAS
Trigger: ACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCT...TATCAATCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTCCTCCTAGCACTGAATaGATACTGTTCAGATCTGTG +
Preference number: 5 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIPPSTE*ILFRSV
Trigger: CACAGATCTGAACAGTATCAATTCAGTGCTAGGAGG...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCAGAACAGGGATGATGTaGGGTCTCAGTCGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIRTGMM*GLSRSR
Trigger: TCTTGACCGACTGAGACCCAACATCATCCCTGTTCT...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ATATTTACCTTGTGCTTTCATGCAAATTTAGGGACCAAACTCAAAGGTTTCATCGCCTCTTTGGTCTCCTaGATCGCTGTTGCCATGGAC +
Preference number: 5 (lower is better)
Translates to: IFTLCFHANLGTKLKGFIASLVS*IAVAMD
Trigger: GTCCATGGCAACAGCGATCAAGGAGACCAAAGAGGC...GATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CAA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCGCCTCTTTGGTCTCCTaGATCGCTGTTGCCATGGAC +
Preference number: 5 (lower is better)
Translates to: NVYRNATENSVKLYTVIGASLVS*IAVAMD
Trigger: GTCCATGGCAACAGCGATCAAGGAGACCAAAGAGGC...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTCTCCAACGCCTCTTaGGTCTCCTTGATCGCTGTT +
Preference number: 5 (lower is better)
Translates to: STFERTAFLSQDLSLSFEFSNAS*VSLIAV
Trigger: AACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAA...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTTTCTCCAACGCCTCTTaGGTCTCCTTGATCGCTGTT +
Preference number: 5 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVFSNAS*VSLIAV
Trigger: AACAGCGATCAAGGAGACCAAAGAGGCGTTGGAGAA...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTAAGCTGTGTACTTTGTaGGTGCAAGCTCTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSAKLCTL*VQALQG
Trigger: ACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTT...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGAAGCACAGAGGGTCATaGAGAGATGACCGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: RTLDTSLMILMLAALQLMKHRGS*RDDRRL
Trigger: TAGCCTGCGGTCATCTCTCAATGACCCTCTGTGCTT...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTGGATTGATAGCCCTGTaGGACCAGGCCATCCAAATC +
Preference number: 5 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSGLIAL*DQAIQI
Trigger: GATTTGGATGGCCTGGTCCAACAGGGCTATCAATCC...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CAA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTATATCATTAAGGGATaGATAGCCCTGTTGGACCAG +
Preference number: 5 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLYIIKG*IALLDQ
Trigger: CTGGTCCAACAGGGCTATCAATCCCTTAATGATATA...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACACTCCACTATATCATTAAGGGATaGATAGCCCTGTTGGACCAG +
Preference number: 5 (lower is better)
Translates to: LYTKCIFPVNWCVFSTLHYIIKG*IALLDQ
Trigger: CTGGTCCAACAGGGCTATCAATCCCTTAATGATATA...GTGGAGTGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTACGACAGTCGTGGTTaGGCGTTGTACTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: RTLDTSLMILMLAALQLMYDSRG*ALYSVR
Trigger: CCTGACAGAGTACAACGCCAAACCACGACTGTCGTA...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCGAATTCAAGACCCTTTaGATACCTGCTACGACAGTC +
Preference number: 5 (lower is better)
Translates to: LLDLESPCRPRNYQKSVIEFKTL*IPATTV
Trigger: GACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATTC...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TTGTACTCTGTCAGGTATATCATTAAGGGATTGATAGCCCTGTTGGACCAGGCCGCAGTCACTGTAAACTaGTTCAAAAGTGAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: LYSVRYIIKGLIALLDQAAVTVN*FKSELH
Trigger: ATGAAGCTCACTTTTGAACAAGTTTACAGTGACTGC...GGCCTGGTCCAACAGGGCTATCAATCCCTTAATGATATACCTGACAGAGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR CAA 90 bp TTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTGCCGTTGCCTTGGTGGCAAACTGTTTGCTTTaGCTTCTAGATCATATGCAA +
Preference number: 5 (lower is better)
Translates to: LCSFLKHYPETNGAVALVANCLL*LLDHMQ
Trigger: TTGCATATGATCTAGAAGCAAAAGCAAACAGTTTGC...CACCAAGGCAACGGCACCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TGTCAGATGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCACTGGGGGCAAACTGTTaGCTTTTGCTTCTAGATCAT +
Preference number: 5 (lower is better)
Translates to: CQMELRRFLYDCFCMPFPLGANC*LLLLDH
Trigger: ATGATCTAGAAGCAAAAGCAAACAGTTTGCCCCCAG...TGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCATCTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGTCCATTCCCTGTGCGTaGAAGTATCTTGACGCTTTG +
Preference number: 5 (lower is better)
Translates to: MDYNVIVFILKALPRDQWSIPCA*KYLDAL
Trigger: CAAAGCGTCAAGATACTTCAACGCACAGGGAATGGA...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GAATGCCTACATCTGGAATTTCATTACATCAACGTTAAATTTTGTCCGACCAGTGCGTTGCTCCTGGATTaGGAAAGTCCTTGTAGACCC +
Preference number: 5 (lower is better)
Translates to: ECLHLEFHYINVKFCPTSALLLD*ESPCRP
Trigger: GGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC...ACTGGTCGGACAAAATTTAACGTTGATGTAATGAAATTCCAGATGTAGGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CAA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGGGGAGGGAGTCATCCTaGAATAGTGATGGACCATGG +
Preference number: 5 (lower is better)
Translates to: RTLDTSLMILMLAALQLMGRESS*NSDGPW
Trigger: CCATGGTCCATCACTATTCAAGGATGACTCCCTCCC...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTACTAAAAAGTTTGGGTaGGACGGGCACCGGCACCAC +
Preference number: 5 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESTKKFG*DGHRHH
Trigger: GTGGTGCCGGTGCCCGTCCAACCCAAACTTTTTAGT...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539194.6
CDS CCA 90 bp GTACCACATAGAGAAAGATATGCACTAGTTCAAAGAGAATGCCAATaGGTCCAGCTTTATGGGAGTCTTGGGTCTCATAATTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: VPHRERYALVQRECQ*VQLYGSLGSHNLLQ
Trigger: CTGCAACAAATTATGAGACCCAAGACTCCCATAAAGCTGGACCCATTGGCATTCTCTTTGAACTAGTGCATATCTTTCTCTATGTGGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
ENST00000675377.1
ENST00000675613.1
CDS-3UTR CAA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACAAGCTTTATGGGAGTCTaGGGTCTCATAATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTSFMGV*GLIICC
Trigger: GCAACAAATTATGAGACCCAAGACTCCCATAAAGCT...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CAA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCAGCTTTATGGGAGTCTaGGGTCTCATAATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: LLDLESPCRPRNYQKSVISFMGV*GLIICC
Trigger: GCAACAAATTATGAGACCCAAGACTCCCATAAAGCT...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp ATCTGTCCTAAGAACGTTATTAACGTTGTCAAGTTCTGCATCCACGGGTGGAAGATTTCTCCACCACATTaGTTACAGCAACGACACATA +
Preference number: 5 (lower is better)
Translates to: ICPKNVINVVKFCIHGWKISPPH*LQQRHI
Trigger: TATGTGTCGTTGCTGTAACAAATGTGGTGGAGAAAT...CTTCCACCCGTGGATGCAGAACTTGACAACGTTAATAACGTTCTTAGGACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTTCTTACCTGGTGATTaGCCACAAAACCATAGAAGA +
Preference number: 5 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLFLPGD*PQNHRR
Trigger: TCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGAA...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACAAGAGTTCGCAAGTCCTaGAAATTGCTATCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTRVRKS*KLLSAS
Trigger: ACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCT...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp AAATCACCAACAGGGAGATTGCAAAGCATTTCCTCAGGAAGGGCCCATTTTCCTTGGGCCAATATATATTaGATTTGCTCTGGAGTTTCA +
Preference number: 5 (lower is better)
Translates to: KSPTGRLQSISSGRAHFPWANIY*ICSGVS
Trigger: TGAAACTCCAGAGCAAATCAAATATATATTGGCCCA...AGGAAAATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGCCTCCTAGCACTGAATaGATACTGTTCAGATCTGTG +
Preference number: 5 (lower is better)
Translates to: MDYNVIVFILKALPRDQWPPSTE*ILFRSV
Trigger: CACAGATCTGAACAGTATCAATTCAGTGCTAGGAGG...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGAAGCTGTGTACTTTGTaGGTGCAAGCTCTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: MDYNVIVFILKALPRDQWKLCTL*VQALQG
Trigger: ACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTT...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGAAGCTGTGTACTTTGTaGGTGCAAGCTCTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQKLCTL*VQALQG
Trigger: ACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTT...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGGCTAAGCTGTGTACTTaGTTGGTGCAAGCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: MDYNVIVFILKALPRDQWAKLCT*LVQALQ
Trigger: TTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGC...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp ATATTTACCTTGTGCTTTCATGCAAATTTAGGGACCAAACTCAAAGGTTTCATCAAGCACAGAGGGTCATaGAGAGATGACCGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: IFTLCFHANLGTKLKGFIKHRGS*RDDRRL
Trigger: TAGCCTGCGGTCATCTCTCAATGACCCTCTGTGCTT...GATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTAAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CAA 90 bp ACTATCATAACTAATACTGCAAAACACCTCCCTCTTCATGATGATTTCTTCACAAAGCACAGAGGGTCATaGAGAGATGACCGCAGGCTA +
Preference number: 5 (lower is better)
Translates to: TIITNTAKHLPLHDDFFTKHRGS*RDDRRL
Trigger: TAGCCTGCGGTCATCTCTCAATGACCCTCTGTGCTT...TGTGAAGAAATCATCATGAAGAGGGAGGTGTTTTGCAGTATTAGTTATGATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS-3UTR CAA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCTGTTGCAGGTTTCACTaGATGGATGCACCAAGCACA +
Preference number: 5 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFCCRFH*MDAPST
Trigger: TGTGCTTGGTGCATCCATCAAGTGAAACCTGCAACA...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTTATATCATTAAGGGATaGATAGCCCTGTTGGACCAG +
Preference number: 5 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIYIIKG*IALLDQ
Trigger: CTGGTCCAACAGGGCTATCAATCCCTTAATGATATA...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTTACGACAGTCGTGGTTaGGCGTTGTACTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESYDSRG*ALYSVR
Trigger: CCTGACAGAGTACAACGCCAAACCACGACTGTCGTA...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACAGAATTCAAGACCCTTTaGATACCTGCTACGACAGTC +
Preference number: 5 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTEFKTL*IPATTV
Trigger: GACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATTC...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGGAATTCAAGACCCTTTaGATACCTGCTACGACAGTC +
Preference number: 5 (lower is better)
Translates to: MDYNVIVFILKALPRDQWEFKTL*IPATTV
Trigger: GACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATTC...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TTGTACTCTGTCAGGTATATCATTAAGGGATTGATAGCCCTGTTGGACCAGGCCTATAGGAAGGACTCGTaGCTGGTGAATTGTTTTAAT +
Preference number: 5 (lower is better)
Translates to: LYSVRYIIKGLIALLDQAYRKDS*LVNCFN
Trigger: ATTAAAACAATTCACCAGCAACGAGTCCTTCCTATA...GGCCTGGTCCAACAGGGCTATCAATCCCTTAATGATATACCTGACAGAGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR CAA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGGTGATCCTTTCCACTTaGAGTATCCTGATGCTCAAG +
Preference number: 5 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQVILST*SILMLK
Trigger: CTTGAGCATCAGGATACTCAAAGTGGAAAGGATCAC...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ATATTTACCTTGTGCTTTCATGCAAATTTAGGGACCAAACTCAAAGGTTTCATCGCGTTGCTCCTGGATTaGGAAAGTCCTTGTAGACCC +
Preference number: 5 (lower is better)
Translates to: IFTLCFHANLGTKLKGFIALLLD*ESPCRP
Trigger: GGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC...GATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTAAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CAA 90 bp CTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTATCGCGTTGCTCCTGGATTaGGAAAGTCCTTGTAGACCC +
Preference number: 5 (lower is better)
Translates to: LDTSLMILMLAALQLMFIALLLD*ESPCRP
Trigger: GGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC...GATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGGGGAGGGAGTCATCCTaGAATAGTGATGGACCATGG +
Preference number: 5 (lower is better)
Translates to: LQLMFIVMQQKTLLNCTPGRESS*NSDGPW
Trigger: CCATGGTCCATCACTATTCAAGGATGACTCCCTCCC...CGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCATTTCTCCACCACATTaGTTACAGCAACGACACATA +
Preference number: 5 (lower is better)
Translates to: LLDLESPCRPRNYQKSVIISPPH*LQQRHI
Trigger: TATGTGTCGTTGCTGTAACAAATGTGGTGGAGAAAT...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GACAGTCGTGGTTTGGCGTTGTACTCTGTCAGGTATATCATTAAGGGATTGATAATTTCTCCACCACATTaGTTACAGCAACGACACATA +
Preference number: 5 (lower is better)
Translates to: DSRGLALYSVRYIIKGLIISPPH*LQQRHI
Trigger: TATGTGTCGTTGCTGTAACAAATGTGGTGGAGAAAT...TATCAATCCCTTAATGATATACCTGACAGAGTACAACGCCAAACCACGACTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp TGGACCAGGCCATCCAAATCTGTCCTAAGAACGTTATTAACGTTGTCAAGTTCTTTCTTACCTGGTGATTaGCCACAAAACCATAGAAGA +
Preference number: 5 (lower is better)
Translates to: WTRPSKSVLRTLLTLSSSFLPGD*PQNHRR
Trigger: TCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGAA...AGAACTTGACAACGTTAATAACGTTCTTAGGACAGATTTGGATGGCCTGGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511153.5
ENST00000513946.2
CDS-3UTR CAA 90 bp CTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGTGATCTTCTTACCTGGTGATTaGCCACAAAACCATAGAAGA +
Preference number: 5 (lower is better)
Translates to: LLDLESPCRPRNYQKSVIFLPGD*PQNHRR
Trigger: TCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGAA...GATCACAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCAGTTTCCGACTCCTTTaGATCCGGGTTCTTACCTGG +
Preference number: 5 (lower is better)
Translates to: NVYRNATENSVKLYTVIGSFRLL*IRVLTW
Trigger: CCAGGTAAGAACCCGGATCAAAAGGAGTCGGAAACT...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGAGTTCGCAAGTCCTaGAAATTGCTATCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFRVRKS*KLLSAS
Trigger: ACTGGCAGATAGCAATTTCAAGGACTTGCGAACTCT...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTTTGTCCTTGGTAGTGTaGTACTGGGCCAATATATAT +
Preference number: 5 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSALSLVV*YWANIY
Trigger: ATATATATTGGCCCAGTACAACACTACCAAGGACAA...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTCCTCCTAGCACTGAATaGATACTGTTCAGATCTGTG +
Preference number: 5 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVPPSTE*ILFRSV
Trigger: CACAGATCTGAACAGTATCAATTCAGTGCTAGGAGG...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAACCTCCTAGCACTGAATaGATACTGTTCAGATCTGTG +
Preference number: 5 (lower is better)
Translates to: STFERTAFLSQDLSLSFEPPSTE*ILFRSV
Trigger: CACAGATCTGAACAGTATCAATTCAGTGCTAGGAGG...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGAGAACAGGGATGATGTaGGGTCTCAGTCGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: SCTPINVYRNATENSVKLRTGMM*GLSRSR
Trigger: TCTTGACCGACTGAGACCCAACATCATCCCTGTTCT...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCAGAACAGGGATGATGTaGGGTCTCAGTCGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: NVYRNATENSVKLYTVIGRTGMM*GLSRSR
Trigger: TCTTGACCGACTGAGACCCAACATCATCCCTGTTCT...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAAGCTGTGTACTTTGTaGGTGCAAGCTCTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFKLCTL*VQALQG
Trigger: ACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTT...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTGTTGCAGGTTTCACTaGATGGATGCACCAAGCACA +
Preference number: 5 (lower is better)
Translates to: RTLDTSLMILMLAALQLMCCRFH*MDAPST
Trigger: TGTGCTTGGTGCATCCATCAAGTGAAACCTGCAACA...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTGCCTCAGTTCAGGGTaGCTATTCAGCTGGCTTAGA +
Preference number: 5 (lower is better)
Translates to: SCTPINVYRNATENSVKLCLSSG*LFSWLR
Trigger: TCTAAGCCAGCTGAATAGCAACCCTGAACTGAGGCA...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGAGAACGTTATTAACGTaGTCAAGTTCTGCATCCACG +
Preference number: 5 (lower is better)
Translates to: MDYNVIVFILKALPRDQWRTLLT*SSSAST
Trigger: CGTGGATGCAGAACTTGACAACGTTAATAACGTTCT...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp CGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGCACAAGAACGTTATTAACGTaGTCAAGTTCTGCATCCACG +
Preference number: 5 (lower is better)
Translates to: RLLYTKCIFPVNWCVFSTRTLLT*SSSAST
Trigger: CGTGGATGCAGAACTTGACAACGTTAATAACGTTCT...TGTGCTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTGGCAAACTGTTTGCTTTaGCTTCTAGATCATATGCAA +
Preference number: 5 (lower is better)
Translates to: RCSWIWKVLVDPETTKNLANCLL*LLDHMQ
Trigger: TTGCATATGATCTAGAAGCAAAAGCAAACAGTTTGC...CAGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAACTGGGGGCAAACTGTTaGCTTTTGCTTCTAGATCAT +
Preference number: 5 (lower is better)
Translates to: STFERTAFLSQDLSLSFELGANC*LLLLDH
Trigger: ATGATCTAGAAGCAAAAGCAAACAGTTTGCCCCCAG...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp GCGTTGCTCCTGGATTTGGAAAGTCCTTGTAGACCCAGAAACTACCAAAAATCTATCTCTCTCTCTCTTTaGAATTTGTCAGATGGAGTT +
Preference number: 5 (lower is better)
Translates to: ALLLDLESPCRPRNYQKSISLSL*NLSDGV
Trigger: AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGAT...AGATTTTTGGTAGTTTCTGGGTCTACAAGGACTTTCCAAATCCAGGAGCAACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TATACAAATCACCAACAGGGAGATTGCAAAGCATTTCCTCAGGAAGGGCCCATTATCTCTCTCTCTCTTTaGAATTTGTCAGATGGAGTT +
Preference number: 5 (lower is better)
Translates to: YTNHQQGDCKAFPQEGPIISLSL*NLSDGV
Trigger: AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGAT...AATGGGCCCTTCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGATTTGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513946.2
CDS-3UTR CAA 90 bp ACTATCATAACTAATACTGCAAAACACCTCCCTCTTCATGATGATTTCTTCACACTCCTATCTGGGCCTTaGTGTTCTCATCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: TIITNTAKHLPLHDDFFTLLSGP*CSHLLG
Trigger: TCCCAGAAGATGAGAACACAAAGGCCCAGATAGGAG...TGTGAAGAAATCATCATGAAGAGGGAGGTGTTTTGCAGTATTAGTTATGATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS TCA 90 bp AGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTATCAATGTTGTaGTGGGTTTTTCATGGGTATAGTTTCAACATCATCGTACACGTC +
Preference number: 5 (lower is better)
Translates to: SILMLKQFQHQLSML*WVFHGYSFNIIVHV
Trigger: GACGTGTACGATGATGTTGAAACTATACCCATGAAAAACCCATCACAACATTGATAGCTGATGTTGAAACTGCTTGAGCATCAGGATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503884.5
ENST00000540805.6
CDS GCA 90 bp AGGCAAGACATTCCTTCTAAAGTTTTTCACTTTAGAAAGTGCACATaGTTGGTTCTGTGTGCCTCTTCTTGCACTACCTTTTATGCTTTC +
Preference number: 5 (lower is better)
Translates to: RQDIPSKVFHFRKCT*LVLCASSCTTFYAF
Trigger: GAAAGCATAAAAGGTAGTGCAAGAAGAGGCACACAGAACCAAGCATGTGCACTTTCTAAAGTGAAAAACTTTAGAAGGAATGTCTTGCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS-3UTR CAA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAACTTGGGTCTCATAATTaGTTGCAGGCAATTCATAAT +
Preference number: 5 (lower is better)
Translates to: WSYAGFSMIAFACHFQVELGSHN*LQAIHN
Trigger: ATTATGAATTGCCTGCAACAAATTATGAGACCCAAG...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTCTTGGGTCTCATAATTaGTTGCAGGCAATTCATAAT +
Preference number: 5 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSALGSHN*LQAIHN
Trigger: ATTATGAATTGCCTGCAACAAATTATGAGACCCAAG...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCAGCTTTATGGGAGTCTaGGGTCTCATAATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKISFMGV*GLIICC
Trigger: GCAACAAATTATGAGACCCAAGACTCCCATAAAGCT...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAAAGCTTTATGGGAGTCTaGGGTCTCATAATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: STFERTAFLSQDLSLSFESFMGV*GLIICC
Trigger: GCAACAAATTATGAGACCCAAGACTCCCATAAAGCT...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTTCACCAACAGGGAGATaGCAAAGCATTTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: TLDTSLMILMLAALQLMFSPTGR*QSISSG
Trigger: TCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGA...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTTCACCAACAGGGAGATaGCAAAGCATTTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESSPTGR*QSISSG
Trigger: TCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGA...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTCACCAACAGGGAGATaGCAAAGCATTTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: SCTPINVYRNATENSVKLSPTGR*QSISSG
Trigger: TCCTGAGGAAATGCTTTGCAATCTCCCTGTTGGTGA...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CAAAAGGTATATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGCGCAAGTCCTTGAAATaGCTATCTGCCAGTTTCCGA +
Preference number: 5 (lower is better)
Translates to: QKVYTPFTVHKMHLSCKLRKSLK*LSASFR
Trigger: TCGGAAACTGGCAGATAGCAATTTCAAGGACTTGCG...CAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TGTGATCCTTTCCACTTTGAGTATCCTGATGCTCAAGCAGTTTCAACATCAGCTTGGGCCAATATATATTaGATTTGCTCTGGAGTTTCA +
Preference number: 5 (lower is better)
Translates to: CDPFHFEYPDAQAVSTSAWANIY*ICSGVS
Trigger: TGAAACTCCAGAGCAAATCAAATATATATTGGCCCA...AGCTGATGTTGAAACTGCTTGAGCATCAGGATACTCAAAGTGGAAAGGATCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GTGTGTTCAGCACACTCCACACATGGCAATATGTTAGAATCTAGCCATCACATTTGGGCCAATATATATTaGATTTGCTCTGGAGTTTCA +
Preference number: 5 (lower is better)
Translates to: VCSAHSTHGNMLESSHHIWANIY*ICSGVS
Trigger: TGAAACTCCAGAGCAAATCAAATATATATTGGCCCA...AATGTGATGGCTAGATTCTAACATATTGCCATGTGTGGAGTGTGCTGAACACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTAGATCTGTGAACGCCTaGTCCTTGGTAGTGTTGTAC +
Preference number: 5 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFRSVNA*SLVVLY
Trigger: GTACAACACTACCAAGGACAAGGCGTTCACAGATCT...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATATATCATTAAGGGATaGATAGCCCTGTTGGACCAG +
Preference number: 5 (lower is better)
Translates to: STFERTAFLSQDLSLSFEYIIKG*IALLDQ
Trigger: CTGGTCCAACAGGGCTATCAATCCCTTAATGATATA...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCAGGCAGTCACTGTAAACTaGTTCAAAAGTGAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: TPFTVHKMHLSCKLVCVQAVTVN*FKSELH
Trigger: ATGAAGCTCACTTTTGAACAAGTTTACAGTGACTGC...CTGAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGGCAGTCACTGTAAACTaGTTCAAAAGTGAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: MDYNVIVFILKALPRDQWAVTVN*FKSELH
Trigger: ATGAAGCTCACTTTTGAACAAGTTTACAGTGACTGC...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
CDS-3UTR CAA 90 bp GACCAAACTCAAAGGTTTCATCCATGCTGGACACCAGATCTAAGAATTGTGACAGCAAACTGTTTGCTTTaGCTTCTAGATCATATGCAA +
Preference number: 5 (lower is better)
Translates to: DQTQRFHPCWTPDLRIVTANCLL*LLDHMQ
Trigger: TTGCATATGATCTAGAAGCAAAAGCAAACAGTTTGC...TGTCACAATTCTTAGATCTGGTGTCCAGCATGGATGAAACCTTTGAGTTTGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CAA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAAGCAAACTGTTTGCTTTaGCTTCTAGATCATATGCAA +
Preference number: 5 (lower is better)
Translates to: WSYAGFSMIAFACHFQVEANCLL*LLDHMQ
Trigger: TTGCATATGATCTAGAAGCAAAAGCAAACAGTTTGC...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TGGAGTTACGCAGGTTTCTCTATGATTGCTTTTGCATGCCATTTCCAAGTGGAATATAGGAAGGACTCGTaGCTGGTGAATTGTTTTAAT +
Preference number: 5 (lower is better)
Translates to: WSYAGFSMIAFACHFQVEYRKDS*LVNCFN
Trigger: ATTAAAACAATTCACCAGCAACGAGTCCTTCCTATA...TTCCACTTGGAAATGGCATGCAAAAGCAATCATAGAGAAACCTGCGTAACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTTCCATTCCCTGTGCGTaGAAGTATCTTGACGCTTTG +
Preference number: 5 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESSIPCA*KYLDAL
Trigger: CAAAGCGTCAAGATACTTCAACGCACAGGGAATGGA...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ATATTTACCTTGTGCTTTCATGCAAATTTAGGGACCAAACTCAAAGGTTTCATCTCCATTCCCTGTGCGTaGAAGTATCTTGACGCTTTG +
Preference number: 5 (lower is better)
Translates to: IFTLCFHANLGTKLKGFISIPCA*KYLDAL
Trigger: CAAAGCGTCAAGATACTTCAACGCACAGGGAATGGA...GATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS GCA 90 bp TTTCACTTTAGAAAGTGCACATGCTTGGTTCTGTGTGCCTCTTCTTaGACTACCTTTTATGCTTTCGGTAAAGAAACAAACTCTTTATCG +
Preference number: 5 (lower is better)
Translates to: FHFRKCTCLVLCASS*TTFYAFGKETNSLS
Trigger: CGATAAAGAGTTTGTTTCTTTACCGAAAGCATAAAAGGTAGTGCAAGAAGAGGCACACAGAACCAAGCATGTGCACTTTCTAAAGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS CCA 90 bp AAGACATTCCTTCTAAAGTTTTTCACTTTAGAAAGTGCACATGCTTaGTTCTGTGTGCCTCTTCTTGCACTACCTTTTATGCTTTCGGTA +
Preference number: 5 (lower is better)
Translates to: KTFLLKFFTLESAHA*FCVPLLALPFMLSV
Trigger: TACCGAAAGCATAAAAGGTAGTGCAAGAAGAGGCACACAGAACCAAGCATGTGCACTTTCTAAAGTGAAAAACTTTAGAAGGAATGTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS-3UTR CAA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTCCTCCTAGCACTGAATaGATACTGTTCAGATCTGTG +
Preference number: 5 (lower is better)
Translates to: TLDTSLMILMLAALQLMFPPSTE*ILFRSV
Trigger: CACAGATCTGAACAGTATCAATTCAGTGCTAGGAGG...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTCCTCCTAGCACTGAATaGATACTGTTCAGATCTGTG +
Preference number: 5 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESPPSTE*ILFRSV
Trigger: CACAGATCTGAACAGTATCAATTCAGTGCTAGGAGG...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGAAGCTGTGTACTTTGTaGGTGCAAGCTCTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: SCTPINVYRNATENSVKLKLCTL*VQALQG
Trigger: ACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTT...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTAAGCTGTGTACTTTGTaGGTGCAAGCTCTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESKLCTL*VQALQG
Trigger: ACCTTGAAGAGCTTGCACCAACAAAGTACACAGCTT...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGGCTAAGCTGTGTACTTaGTTGGTGCAAGCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: SCTPINVYRNATENSVKLAKLCT*LVQALQ
Trigger: TTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGC...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTATCGCTAAGCTGTGTACTTaGTTGGTGCAAGCTCTTCAA +
Preference number: 5 (lower is better)
Translates to: LDTSLMILMLAALQLMFIAKLCT*LVQALQ
Trigger: TTGAAGAGCTTGCACCAACAAAGTACACAGCTTAGC...GATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTGAATTCAAGACCCTTTaGATACCTGCTACGACAGTC +
Preference number: 5 (lower is better)
Translates to: TLDTSLMILMLAALQLMFEFKTL*IPATTV
Trigger: GACTGTCGTAGCAGGTATCAAAAGGGTCTTGAATTC...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCGCAGTCACTGTAAACTaGTTCAAAAGTGAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIAVTVN*FKSELH
Trigger: ATGAAGCTCACTTTTGAACAAGTTTACAGTGACTGC...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAAGCAGTCACTGTAAACTaGTTCAAAAGTGAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: STFERTAFLSQDLSLSFEAVTVN*FKSELH
Trigger: ATGAAGCTCACTTTTGAACAAGTTTACAGTGACTGC...TTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp TTCAACAGCACCAAGAAGTCAATGGTGACTTATTTAGCTCATTTAGAAGAAAGTCTGGGGGCAAACTGTTaGCTTTTGCTTCTAGATCAT +
Preference number: 5 (lower is better)
Translates to: FNSTKKSMVTYLAHLEESLGANC*LLLLDH
Trigger: ATGATCTAGAAGCAAAAGCAAACAGTTTGCCCCCAG...ACTTTCTTCTAAATGAGCTAAATAAGTCACCATTGACTTCTTGGTGCTGTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ATATTTACCTTGTGCTTTCATGCAAATTTAGGGACCAAACTCAAAGGTTTCATCGTGATCCTTTCCACTTaGAGTATCCTGATGCTCAAG +
Preference number: 5 (lower is better)
Translates to: IFTLCFHANLGTKLKGFIVILST*SILMLK
Trigger: CTTGAGCATCAGGATACTCAAAGTGGAAAGGATCAC...GATGAAACCTTTGAGTTTGGTCCCTAAATTTGCATGAAAGCACAAGGTAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
CDS-3UTR CAA 90 bp ATGGACTATAACGTGATTGTGTTCATTCTTAAAGCACTACCCAGAGACCAATGGATCTCTCTCTCTCTTTaGAATTTGTCAGATGGAGTT +
Preference number: 5 (lower is better)
Translates to: MDYNVIVFILKALPRDQWISLSL*NLSDGV
Trigger: AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGAT...CCATTGGTCTCTGGGTAGTGCTTTAAGAATGAACACAATCACGTTATAGTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTGTCAGATGGAGTTCTTGGGTCTCATAATTaGTTGCAGGCAATTCATAAT +
Preference number: 5 (lower is better)
Translates to: QHFSLKISLSLLNLSDGVLGSHN*LQAIHN
Trigger: ATTATGAATTGCCTGCAACAAATTATGAGACCCAAG...AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp AGCTGCACTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGAGCTTTATGGGAGTCTaGGGTCTCATAATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: SCTPINVYRNATENSVKLSFMGV*GLIICC
Trigger: GCAACAAATTATGAGACCCAAGACTCCCATAAAGCT...CAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAGTGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGGTGTGTGTTCTGGGCCAATATATATTaGATTTGCTCTGGAGTTTCA +
Preference number: 5 (lower is better)
Translates to: IHRLLYTKCIFPVNWCVFWANIY*ICSGVS
Trigger: TGAAACTCCAGAGCAAATCAAATATATATTGGCCCA...GAACACACACCAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CAAAAGGTATATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGAGAACGTTATTAACGTaGTCAAGTTCTGCATCCACG +
Preference number: 5 (lower is better)
Translates to: QKVYTPFTVHKMHLSCKLRTLLT*SSSAST
Trigger: CGTGGATGCAGAACTTGACAACGTTAATAACGTTCT...CAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTAGAACGTTATTAACGTaGTCAAGTTCTGCATCCACG +
Preference number: 5 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFRTLLT*SSSAST
Trigger: CGTGGATGCAGAACTTGACAACGTTAATAACGTTCT...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp AGAACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGGCAGTCACTGTAAACTaGTTCAAAAGTGAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: RTLDTSLMILMLAALQLMAVTVN*FKSELH
Trigger: ATGAAGCTCACTTTTGAACAAGTTTACAGTGACTGC...CATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp GCATCTGTTAAAACAACTCCACTTTTGAACGAACAGCATTTCTCTCTCAAGATCATCTCTCTCTCTCTTTaGAATTTGTCAGATGGAGTT +
Preference number: 5 (lower is better)
Translates to: ASVKTTPLLNEQHFSLKIISLSL*NLSDGV
Trigger: AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGAT...GATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGTGGAGTTGTTTTAACAGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CTCCAATTAATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGATTTCTCCACCACATTaGTTACAGCAACGACACATA +
Preference number: 5 (lower is better)
Translates to: LQLMFIVMQQKTLLNCTPISPPH*LQQRHI
Trigger: TATGTGTCGTTGCTGTAACAAATGTGGTGGAGAAAT...CGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATTAATTGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTATCTTCTTACCTGGTGATTaGCCACAAAACCATAGAAGA +
Preference number: 5 (lower is better)
Translates to: LDTSLMILMLAALQLMFIFLPGD*PQNHRR
Trigger: TCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGAA...GATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CAAAAGGTATATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGTTCTTACCTGGTGATTaGCCACAAAACCATAGAAGA +
Preference number: 5 (lower is better)
Translates to: QKVYTPFTVHKMHLSCKLFLPGD*PQNHRR
Trigger: TCTTCTATGGTTTTGTGGCAAATCACCAGGTAAGAA...CAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTTTGTCCTTGGTAGTGTaGTACTGGGCCAATATATAT +
Preference number: 5 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFLSLVV*YWANIY
Trigger: ATATATATTGGCCCAGTACAACACTACCAAGGACAA...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTATCGCAAACTGTTTGCTTTaGCTTCTAGATCATATGCAA +
Preference number: 5 (lower is better)
Translates to: LDTSLMILMLAALQLMFIANCLL*LLDHMQ
Trigger: TTGCATATGATCTAGAAGCAAAAGCAAACAGTTTGC...GATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp AATGTTTATCGTAATGCAACAGAAAACTCTGTTAAACTGTACACCGTAATTGGCGCAAACTGTTTGCTTTaGCTTCTAGATCATATGCAA +
Preference number: 5 (lower is better)
Translates to: NVYRNATENSVKLYTVIGANCLL*LLDHMQ
Trigger: TTGCATATGATCTAGAAGCAAAAGCAAACAGTTTGC...GCCAATTACGGTGTACAGTTTAACAGAGTTTTCTGTTGCATTACGATAAACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ACTTTTGAACGAACAGCATTTCTCTCTCAAGATCTCTCTCTCTCTTTTGAATTTTATAGGAAGGACTCGTaGCTGGTGAATTGTTTTAAT +
Preference number: 5 (lower is better)
Translates to: TFERTAFLSQDLSLSFEFYRKDS*LVNCFN
Trigger: ATTAAAACAATTCACCAGCAACGAGTCCTTCCTATA...AAATTCAAAAGAGAGAGAGAGATCTTGAGAGAGAAATGCTGTTCGTTCAAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CAAAAGGTATATACACCGTTTACTGTACACAAAATGCATCTTTCCTGTAAACTGTATAGGAAGGACTCGTaGCTGGTGAATTGTTTTAAT +
Preference number: 5 (lower is better)
Translates to: QKVYTPFTVHKMHLSCKLYRKDS*LVNCFN
Trigger: ATTAAAACAATTCACCAGCAACGAGTCCTTCCTATA...CAGTTTACAGGAAAGATGCATTTTGTGTACAGTAAACGGTGTATATACCTTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp CTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTATCATCTCTCTCTCTCTTTaGAATTTGTCAGATGGAGTT +
Preference number: 5 (lower is better)
Translates to: LDTSLMILMLAALQLMFIISLSL*NLSDGV
Trigger: AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGAT...GATAAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS-3UTR CAA 90 bp ACACTTGATACTAGTCTGATGATACTCATGTTAGCTGCACTCCAATTAATGTTTATCTCTCTCTCTCTTTaGAATTTGTCAGATGGAGTT +
Preference number: 5 (lower is better)
Translates to: TLDTSLMILMLAALQLMFISLSL*NLSDGV
Trigger: AACTCCATCTGACAAATTCAAAAGAGAGAGAGAGAT...AAACATTAATTGGAGTGCAGCTAACATGAGTATCATCAGACTAGTATCAAGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
CDS GCA 72 bp CTCAAGGCACCATCCCGTGCACCCGGCTCCCGCTCCTaGTCCCGCCCTAGTCACCGCTGCCGCCGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: LKAPSRAPGSRS*SRPSHRCRRPS
Trigger: GGAAGGGCGGCGGCAGCGGTGACTAGGGCGGGAGCAGGAGCGGGAGCCGGGTGCACGGGATGGTGCCTTGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508167.5
CDS TCA 72 bp AAACCCGAGCCCTGGACGCACTCTGATTGGACCGGCTaGGCTGCTTCGCCACGTAGCCCTGGGGCGCCCACC +
Preference number: 6 (lower is better)
Translates to: KPEPWTHSDWTG*AASPRSPGAPT
Trigger: GGTGGGCGCCCCAGGGCTACGTGGCGAAGCAGCTCAGCCGGTCCAATCAGAGTGCGTCCAGGGCTCGGGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS CCA 72 bp GGTCACCGTTCTCCCCGAGAGCGAGTCCGAAGTCTCTaGGGCCCCGGTCCAGTTCGCACACTCACCTCCGAC +
Preference number: 6 (lower is better)
Translates to: GHRSPRERVRSL*GPGPVRTLTSD
Trigger: GTCGGAGGTGAGTGTGCGAACTGGACCGGGGCCCCAGAGACTTCGGACTCGCTCTCGGGGAGAACGGTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502501.1
ENST00000508940.1
CDS CCA 72 bp CTCCAGGCCAAGCCCCCTCCAGGCCTAGCTCCCTTCTaGGCGGAAGCCTCTCGCGAGCTGCGGGACACAAAA +
Preference number: 6 (lower is better)
Translates to: LQAKPPPGLAPF*AEASRELRDTK
Trigger: TTTTGTGTCCCGCAGCTCGCGAGAGGCTTCCGCCCAGAAGGGAGCTAGGCCTGGAGGGGGCTTGGCCTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514967.5
CDS CAA 72 bp GCGGGGCGTCGCGGGCCACCACTCAGACTAAAAAGTTaGGGTTGGACGGGCACCGGCACCACCACGCTCTCC +
Preference number: 6 (lower is better)
Translates to: AGRRGPPLRLKS*GWTGTGTTTLS
Trigger: GGAGAGCGTGGTGGTGCCGGTGCCCGTCCAACCCAAACTTTTTAGTCTGAGTGGTGGCCCGCGACGCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502501.1
ENST00000508322.1
ENST00000508940.1
ENST00000539194.6
CDS CCA 72 bp CGTCGCGGGCCACCACTCAGACTAAAAAGTTTGGGTTaGACGGGCACCGGCACCACCACGCTCTCCCCGCAG +
Preference number: 6 (lower is better)
Translates to: RRGPPLRLKSLG*TGTGTTTLSPQ
Trigger: CTGCGGGGAGAGCGTGGTGGTGCCGGTGCCCGTCCAACCCAAACTTTTTAGTCTGAGTGGTGGCCCGCGACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502501.1
ENST00000508322.1
ENST00000508940.1
ENST00000539194.6
CDS CAA 72 bp GCGTCGCGGGCCACCACTCAGACTAAAAAGTTTGGGTaGGACGGGCACCGGCACCACCACGCTCTCCCCGCA +
Preference number: 6 (lower is better)
Translates to: ASRATTQTKKFG*DGHRHHHALPA
Trigger: TGCGGGGAGAGCGTGGTGGTGCCGGTGCCCGTCCAACCCAAACTTTTTAGTCTGAGTGGTGGCCCGCGACGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000502501.1
ENST00000508322.1
ENST00000508940.1
ENST00000539194.6
CDS GCA 72 bp CCATCCCGCGGCGGGAGAGCTGAGAGCATGGCCAGGTaGCGCGTGGGGATCTGCCTCAGTCACTTAAAGATC +
Preference number: 6 (lower is better)
Translates to: PSRGGRAESMAR*RVGICLSHLKI
Trigger: GATCTTTAAGTGACTGAGGCAGATCCCCACGCGGCACCTGGCCATGCTCTCAGCTCTCCCGCCGCGGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS GCA 72 bp ACTCCTCACTGTACACCCCCAGTACAGTGGAAGGAGTaGGCTCAGCCCCGCGCCTGGTCAGCAGATGCCTCT +
Preference number: 6 (lower is better)
Translates to: TPHCTPPVQWKE*AQPRAWSADAS
Trigger: AGAGGCATCTGCTGACCAGGCGCGGGGCTGAGCGCACTCCTTCCACTGTACTGGGGGTGTACAGTGAGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502501.1
CDS GCA 72 bp AGAGCTGAGAGCATGGCCAGGTGCCGCGTGGGGATCTaGCTCAGTCACTTAAAGATCGCGAAACCCGAGCCC +
Preference number: 6 (lower is better)
Translates to: RAESMARCRVGI*LSHLKIAKPEP
Trigger: GGGCTCGGGTTTCGCGATCTTTAAGTGACTGAGGCAGATCCCCACGCGGCACCTGGCCATGCTCTCAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505450.5
CDS CCA 72 bp GAGCAAAGGGGACCAGGAGGTGGCTGTCCTCTGACCTaGTGGGAAGCCCCAGAAGTCTTGGTCCTGCACATC +
Preference number: 6 (lower is better)
Translates to: EQRGPGGGCPLT*WEAPEVLVLHI
Trigger: GATGTGCAGGACCAAGACTTCTGGGGCTTCCCACCAGGTCAGAGGACAGCCACCTCCTGGTCCCCTTTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511270.1
CDS CAA 90 bp AGGATCCACCGTGCCTCACTGCAGTGCTGCATCAGACACATGAGGTaGGGGGAGGACATGCACGGAGGACATCAGGGCATCTGCCAGGCA +
Preference number: 6 (lower is better)
Translates to: RIHRASLQCCIRHMR*GEDMHGGHQGICQA
Trigger: TGCCTGGCAGATGCCCTGATGTCCTCCGTGCATGTCCTCCCCCAACCTCATGTGTCTGATGCAGCACTGCAGTGAGGCACGGTGGATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS CCA 72 bp CAACTCTGGCACACCCTGCCCGACTGTGACTTCAGGTaGATCACAACCCCTCTGAACCTGCAGGATCCACCG +
Preference number: 6 (lower is better)
Translates to: QLWHTLPDCDFR*ITTPLNLQDPP
Trigger: CGGTGGATCCTGCAGGTTCAGAGGGGTTGTGATCCACCTGAAGTCACAGTCGGGCAGGGTGTGCCAGAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS CCA 72 bp CAAAGGGGACCAGGAGGTGGCTGTCCTCTGACCTGGTaGGAAGCCCCAGAAGTCTTGGTCCTGCACATCAAT +
Preference number: 6 (lower is better)
Translates to: QRGPGGGCPLTW*EAPEVLVLHIN
Trigger: ATTGATGTGCAGGACCAAGACTTCTGGGGCTTCCCACCAGGTCAGAGGACAGCCACCTCCTGGTCCCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511270.1
CDS CCA 72 bp CTCATGGCACCATCCCCCAGCTGCTGTGCAGGTCCCTaGCTTATTTCTGTATCCCCAGAGCCTGGAACACAG +
Preference number: 6 (lower is better)
Translates to: LMAPSPSCCAGP*LISVSPEPGTQ
Trigger: CTGTGTTCCAGGCTCTGGGGATACAGAAATAAGCCAGGGACCTGCACAGCAGCTGGGGGATGGTGCCATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512304.2
CDS GCA 72 bp GCTTGTTTCACTCATGGCACCATCCCCCAGCTGCTGTaGAGGTCCCTGGCTTATTTCTGTATCCCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: ACFTHGTIPQLL*RSLAYFCIPRA
Trigger: GGCTCTGGGGATACAGAAATAAGCCAGGGACCTGCACAGCAGCTGGGGGATGGTGCCATGAGTGAAACAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512304.2
CDS TCA 72 bp GGCATGGCACGTAGTCGGTGTTTAGTAAGTGCCTGCTaGGCAGCTTGTTTCACTCATGGCACCATCCCCCAG +
Preference number: 6 (lower is better)
Translates to: GMARSRCLVSAC*AACFTHGTIPQ
Trigger: CTGGGGGATGGTGCCATGAGTGAAACAAGCTGCTCAGCAGGCACTTACTAAACACCGACTACGTGCCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512304.2
CDS GCA 72 bp TGGATCACAACCCCTCTGAACCTGCAGGATCCACCGTaGCTCACTGCAGTGCTGCATCAGACACATGAGGTT +
Preference number: 6 (lower is better)
Translates to: WITTPLNLQDPP*LTAVLHQTHEV
Trigger: AACCTCATGTGTCTGATGCAGCACTGCAGTGAGGCACGGTGGATCCTGCAGGTTCAGAGGGGTTGTGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS GCA 72 bp GAGCAGCTTGTTTCACTCATGGCACCATCCCCCAGCTaGTGTGCAGGTCCCTGGCTTATTTCTGTATCCCCA +
Preference number: 6 (lower is better)
Translates to: EQLVSLMAPSPS*CAGPWLISVSP
Trigger: TGGGGATACAGAAATAAGCCAGGGACCTGCACAGCAGCTGGGGGATGGTGCCATGAGTGAAACAAGCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512304.2
CDS CCA 72 bp AAGGCACCATCCCTGGCACGCAGCTGGAAGGCTATCTaGGGTCTGTCTGCTTCTGCTAGCATCAATACTCTG +
Preference number: 6 (lower is better)
Translates to: KAPSLARSWKAI*GLSASASINTL
Trigger: CAGAGTATTGATGCTAGCAGAAGCAGACAGACCCCAGATAGCCTTCCAGCTGCGTGCCAGGGATGGTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502501.1
CDS CCA 72 bp AGTGAACTCCATCTGGAAGGTCGGCAGTTTCAACTCTaGCACACCCTGCCCGACTGTGACTTCAGGTGGATC +
Preference number: 6 (lower is better)
Translates to: SELHLEGRQFQL*HTLPDCDFRWI
Trigger: GATCCACCTGAAGTCACAGTCGGGCAGGGTGTGCCAGAGTTGAAACTGCCGACCTTCCAGATGGAGTTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS CAA 90 bp CCAGGAGGTGGCTGTCCTCTGACCTGGTGGGAAGCCCCAGAAGTCTaGGTCCTGCACATCAATGTCCTTTCACTTACTTCAGAGAACTCG +
Preference number: 6 (lower is better)
Translates to: PGGGCPLTWWEAPEV*VLHINVLSLTSENS
Trigger: CGAGTTCTCTGAAGTAAGTGAAAGGACATTGATGTGCAGGACCAAGACTTCTGGGGCTTCCCACCAGGTCAGAGGACAGCCACCTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511270.1
CDS TCA 72 bp AGTACGAGGGCCATAGCTAGCAAGATCCTCCAAACATaGGGTAGAACTTGGTGCCTCCTGCCTCAGAGCTTC +
Preference number: 6 (lower is better)
Translates to: STRAIASKILQT*GRTWCLLPQSF
Trigger: GAAGCTCTGAGGCAGGAGGCACCAAGTTCTACCTCATGTTTGGAGGATCTTGCTAGCTATGGCCCTCGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000508322.1
ENST00000508940.1
ENST00000510224.5
ENST00000513946.2
ENST00000514967.5
ENST00000539194.6
CDS TCA 72 bp GGCATGGCACGTAGTCGGTGTTTAGTAAGTGCCTGCTaGGCAGCTTGTTTCACTCATGGCACCATCCCTTCA +
Preference number: 6 (lower is better)
Translates to: GMARSRCLVSAC*AACFTHGTIPS
Trigger: TGAAGGGATGGTGCCATGAGTGAAACAAGCTGCTCAGCAGGCACTTACTAAACACCGACTACGTGCCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514693.5
CDS CAA 72 bp GGCTGTCCTCTGACCTGGTGGGAAGCCCCAGAAGTCTaGGTCCTGCACATCAATGTCCTTTCACTTACTTCA +
Preference number: 6 (lower is better)
Translates to: GCPLTWWEAPEV*VLHINVLSLTS
Trigger: TGAAGTAAGTGAAAGGACATTGATGTGCAGGACCAAGACTTCTGGGGCTTCCCACCAGGTCAGAGGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511270.1
CDS CCA 72 bp GGCTGCAGGGTCTTAAATGAGCAGGCTTCTCCTATCTaGGCCTTTGTGTTCTCATCTTCTGGGAAATCACGC +
Preference number: 6 (lower is better)
Translates to: GCRVLNEQASPI*AFVFSSSGKSR
Trigger: GCGTGATTTCCCAGAAGATGAGAACACAAAGGCCCAGATAGGAGAAGCCTGCTCATTTAAGACCCTGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS TCA 72 bp ATCCTACCAGCTCTCATTTGGCTGCAGGGTCTTAAATaGGCAGGCTTCTCCTATCTGGGCCTTTGTGTTCTC +
Preference number: 6 (lower is better)
Translates to: ILPALIWLQGLK*AGFSYLGLCVL
Trigger: GAGAACACAAAGGCCCAGATAGGAGAAGCCTGCTCATTTAAGACCCTGCAGCCAAATGAGAGCTGGTAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS TCA 72 bp AGTGCCCTCCCGCAGCAAAGATGGGAGACAATGACTTaGGATAGACAGCAACTGCAGTTGCACTTCCAGATT +
Preference number: 6 (lower is better)
Translates to: SALPQQRWETMT*DRQQLQLHFQI
Trigger: AATCTGGAAGTGCAACTGCAGTTGCTGTCTATCTCAAGTCATTGTCTCCCATCTTTGCTGCGGGAGGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513108.1
CDS GCA 72 bp TTACAACTACAAATTCCTGGGTGTAAGATCAGGCAGTaGACACGGCCTCTAAGTGGCTCTCTGGGTGAACCA +
Preference number: 6 (lower is better)
Translates to: LQLQIPGCKIRQ*TRPLSGSLGEP
Trigger: TGGTTCACCCAGAGAGCCACTTAGAGGCCGTGTGCACTGCCTGATCTTACACCCAGGAATTTGTAGTTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS GCA 72 bp TTTCTGGCTTCGTTATCCTACCAGCTCTCATTTGGCTaGAGGGTCTTAAATGAGCAGGCTTCTCCTATCTGG +
Preference number: 6 (lower is better)
Translates to: FLASLSYQLSFG*RVLNEQASPIW
Trigger: CCAGATAGGAGAAGCCTGCTCATTTAAGACCCTGCAGCCAAATGAGAGCTGGTAGGATAACGAAGCCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511153.5
CDS CCA 72 bp GGCTTATTTCTGTATCCCCAGAGCCTGGAACACAGTTaGTACTCAATGAAGAATTGCTACCAGCCTGGGCAA +
Preference number: 6 (lower is better)
Translates to: GLFLYPQSLEHS*YSMKNCYQPGQ
Trigger: TTGCCCAGGCTGGTAGCAATTCTTCATTGAGTACCAACTGTGTTCCAGGCTCTGGGGATACAGAAATAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512304.2
CDS CAA 90 bp CTTCTAGGACAGAAGACAGAAGCAAATGGAAGTTCCGCAGGGACCTaGTTACAACTACAAATTCCTGGGTGTAAGATCAGGCAGTGCACA +
Preference number: 6 (lower is better)
Translates to: LLGQKTEANGSSAGT*LQLQIPGCKIRQCT
Trigger: TGTGCACTGCCTGATCTTACACCCAGGAATTTGTAGTTGTAACAAGGTCCCTGCGGAACTTCCATTTGCTTCTGTCTTCTGTCCTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS CAA 72 bp CAGAAGACAGAAGCAAATGGAAGTTCCGCAGGGACCTaGTTACAACTACAAATTCCTGGGTGTAAGATCAGG +
Preference number: 6 (lower is better)
Translates to: QKTEANGSSAGT*LQLQIPGCKIR
Trigger: CCTGATCTTACACCCAGGAATTTGTAGTTGTAACAAGGTCCCTGCGGAACTTCCATTTGCTTCTGTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS GCA 72 bp TCCAGCTTTATGGGAGTCTTGGGTCTCATAATTTGTTaGAGGCAATTCATAATTCCAAGCCTTAGGAGCATC +
Preference number: 6 (lower is better)
Translates to: SSFMGVLGLIIC*RQFIIPSLRSI
Trigger: GATGCTCCTAAGGCTTGGAATTATGAATTGCCTGCAACAAATTATGAGACCCAAGACTCCCATAAAGCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000508322.1
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
ENST00000675377.1
ENST00000675613.1
CDS GCA 72 bp AGAAAGTGCACATGCTTGGTTCTGTGTGCCTCTTCTTaGACTACCTTTTATGCTTTCGGTAAAGAAACAAAC +
Preference number: 6 (lower is better)
Translates to: RKCTCLVLCASS*TTFYAFGKETN
Trigger: GTTTGTTTCTTTACCGAAAGCATAAAAGGTAGTGCAAGAAGAGGCACACAGAACCAAGCATGTGCACTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS CAA 90 bp CAAGACATTCCTTCTAAAGTTTTTCACTTTAGAAAGTGCACATGCTaGGTTCTGTGTGCCTCTTCTTGCACTACCTTTTATGCTTTCGGT +
Preference number: 6 (lower is better)
Translates to: QDIPSKVFHFRKCTC*VLCASSCTTFYAFG
Trigger: ACCGAAAGCATAAAAGGTAGTGCAAGAAGAGGCACACAGAACCAAGCATGTGCACTTTCTAAAGTGAAAAACTTTAGAAGGAATGTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513448.5
CDS CAA 72 bp AAAGAGAATGCCAATGGGTCCAGCTTTATGGGAGTCTaGGGTCTCATAATTTGTTGCAGGCAATTCATAATT +
Preference number: 6 (lower is better)
Translates to: KENANGSSFMGV*GLIICCRQFII
Trigger: AATTATGAATTGCCTGCAACAAATTATGAGACCCAAGACTCCCATAAAGCTGGACCCATTGGCATTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000447510.7
ENST00000505450.5
ENST00000508167.5
ENST00000508322.1
ENST00000510224.5
ENST00000513946.2
ENST00000539194.6
ENST00000540805.6
ENST00000675377.1
ENST00000675613.1
CDS TCA 72 bp ATGCTCAAGCAGTTTCAACATCAGCTATCAATGTTGTaGTGGGTTTTTCATGGGTATAGTTTCAACATCATC +
Preference number: 6 (lower is better)
Translates to: MLKQFQHQLSML*WVFHGYSFNII
Trigger: GATGATGTTGAAACTATACCCATGAAAAACCCATCACAACATTGATAGCTGATGTTGAAACTGCTTGAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503884.5
ENST00000540805.6
CDS CAA 90 bp GGCAACATAGAGAGGCCCTGTCTCTTCATTTCTTCTTTTCTTCTTTaGATGGAACTTCTCAGAATCTTTCTTTTTAAAGAAGAGCTTTGT +
Preference number: 6 (lower is better)
Translates to: GNIERPCLFISSFLL*MELLRIFLFKEELC
Trigger: ACAAAGCTCTTCTTTAAAAAGAAAGATTCTGAGAAGTTCCATCAAAAGAAGAAAAGAAGAAATGAAGAGACAGGGCCTCTCTATGTTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512304.2