Pregenerated sensors for PROK1 (Homo sapiens)
Ensembl gene IDs: ENSG00000143125Ensembl transcript IDs: ENST00000271331.4
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGCTGACTGGGACCAGAGTCTTCAGGGGGCTGATTGGCCTCCCTaGGCTCCCTACACCTGCCTTGGGGTGACTGTCTGCTGCCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: QADWDQSLQGADWPP*APYTCLGVTVCCPL Trigger: CAGAGGGCAGCAGACAGTCACCCCAAGGCAGGTGTAGGGAGCCCAGGGAGGCCAATCAGCCCCCTGAAGACTCTGGTCCCAGTCAGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR CCA 90 bp | CACAAGCCACAGGCTGACTGGGACCAGAGTCTTCAGGGGGCTGATTaGCCTCCCTGGGCTCCCTACACCTGCCTTGGGGTGACTGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: HKPQADWDQSLQGAD*PPWAPYTCLGVTVC Trigger: GCAGACAGTCACCCCAAGGCAGGTGTAGGGAGCCCAGGGAGGCCAATCAGCCCCCTGAAGACTCTGGTCCCAGTCAGCCTGTGGCTTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR CCA 90 bp | TCCTCACAGACCTCACGTGAAGGGCCTGAGGGTCAGGCCAGGACCTaGGACTCTGAGCAATGCACCCAAGAGCCTGTGCCCAGGAATGTC | + |
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Preference number: 1 (lower is better) Translates to: SSQTSREGPEGQART*DSEQCTQEPVPRNV Trigger: GACATTCCTGGGCACAGGCTCTTGGGTGCATTGCTCAGAGTCCCAGGTCCTGGCCTGACCCTCAGGCCCTTCACGTGAGGTCTGTGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR TCA 90 bp | GGAGGGGGAATGTCCTTTCTGCCATTTACCACCTCTCTGGCAGCCTaGGCAGGGAAGAGAACCAGGCTGGCCACCTTTCACACCACAGCC | + |
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Preference number: 1 (lower is better) Translates to: GGGMSFLPFTTSLAA*AGKRTRLATFHTTA Trigger: GGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCTCTTCCCTGCTCAGGCTGCCAGAGAGGTGGTAAATGGCAGAAAGGACATTCCCCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR TCA 90 bp | TTTATTCTAAAGCCAGCAGGTTGGTGTGTAGTTGCCTCCCTGGTCTaGATCAGTGCCCCTTTCAGCCCCTGCCCTGCTCCCTGTCCCTTG | + |
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Preference number: 1 (lower is better) Translates to: FILKPAGWCVVASLV*ISAPFSPCPAPCPL Trigger: CAAGGGACAGGGAGCAGGGCAGGGGCTGAAAGGGGCACTGATTCAGACCAGGGAGGCAACTACACACCAACCTGCTGGCTTTAGAATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR CCA 90 bp | ACCTTTCACACCACAGCCTCAAGCTGTGACATCCTCAGGCCAGCCTaGGGACCATGTCATGATGGGAGGTATGTCTGCCTGTGTGCATAT | + |
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Preference number: 1 (lower is better) Translates to: TFHTTASSCDILRPA*GPCHDGRYVCLCAY Trigger: ATATGCACACAGGCAGACATACCTCCCATCATGACATGGTCCCCAGGCTGGCCTGAGGATGTCACAGCTTGAGGCTGTGGTGTGAAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR TCA 90 bp | GACAGAGGACTGCCCTCCTCAAAGTCACCAACCTGCTCTCAGGGCTaGTCCTTGGAAAGGAGTTGTTTAAGGAAACACCCTAATTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: DRGLPSSKSPTCSQG*SLERSCLRKHPNCL Trigger: AAGGCAATTAGGGTGTTTCCTTAAACAACTCCTTTCCAAGGATCAGCCCTGAGAGCAGGTTGGTGACTTTGAGGAGGGCAGTCCTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCCTTGCTCCCACCCCAATCTGGACAGAGGACTGCCCTCCTCAAAGTCACTGGGCTCCCTACACCTaGCTTGGGGTGACTGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LSLAPTPIWTEDCPPQSHWAPYT*LGVTVC Trigger: GCAGACAGTCACCCCAAGGCAGGTGTAGGGAGCCCA...GTGACTTTGAGGAGGGCAGTCCTCTGTCCAGATTGGGGTGGGAGCAAGGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTGGCAGCCTGAGCAGGGAAGAGAACCAGGCTGGCCACCTTTCACACCACATCCTCAGGCCAGCCTaGGGACCATGTCATGATGGG | + |
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Preference number: 2 (lower is better) Translates to: LSGSLSREENQAGHLSHHILRPA*GPCHDG Trigger: CCCATCATGACATGGTCCCCAGGCTGGCCTGAGGAT...GTGGTGTGAAAGGTGGCCAGCCTGGTTCTCTTCCCTGCTCAGGCTGCCAGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGAGCAGGGAAGAGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGCTGGGGACCATGTCATaGTGGGAGGTATGTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: SLSREENQAGHLSHHSLKLGTMS*WEVCLP Trigger: AGGCAGACATACCTCCCATCATGACATGGTCCCCAG...CTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCTCTTCCCTGCTCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR-3UTR TCA 90 bp | TCTAAAGCCAGCAGGTTGGTGTGTAGTTGCCTCCCTGGTCTGAATCAGTGCCCCCAGGACCTGGGACTCTaGGCAATGCACCCAAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SKASRLVCSCLPGLNQCPQDLGL*AMHPRA Trigger: GGCTCTTGGGTGCATTGCTCAGAGTCCCAGGTCCTG...GGGGCACTGATTCAGACCAGGGAGGCAACTACACACCAACCTGCTGGCTTTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGAGCAGGGAAGAGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGGGACTGGGAGAGTCATaGGAGCTGGGTTTCATGGCA | + |
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Preference number: 2 (lower is better) Translates to: SLSREENQAGHLSHHSLKGLGES*ELGFMA Trigger: TGCCATGAAACCCAGCTCCCATGACTCTCCCAGTCC...CTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCTCTTCCCTGCTCAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR-3UTR GCA 90 bp | TCTAAAGCCAGCAGGTTGGTGTGTAGTTGCCTCCCTGGTCTGAATCAGTGCCCCGGGGTGACTGTCTGCTaGCCTCTGGGAAGAGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: SKASRLVCSCLPGLNQCPGVTVC*PLGRAN Trigger: ATTGGCTCTTCCCAGAGGGCAGCAGACAGTCACCCC...GGGGCACTGATTCAGACCAGGGAGGCAACTACACACCAACCTGCTGGCTTTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR-3UTR CCA 90 bp | AGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGCTGTGACATCCTCAGGAGTCAGTGTAGGGACTaGGAGAGTCATGGGAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RTRLATFHTTASSCDILRSQCRD*ESHGSW Trigger: CCAGCTCCCATGACTCTCCCAGTCCCTACACTGACT...CCTGAGGATGTCACAGCTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGCCAATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGACCTCTCTGGCAGCCTaGGCAGGGAAGAGAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: EEPILSLWSETKELTNRGTSLAA*AGKRTR Trigger: CCTGGTTCTCTTCCCTGCTCAGGCTGCCAGAGAGGT...CCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGATTGGCTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGCCAATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGAGAGAGCAGGTCACCTaGGGAGGGGAGGGGGAATGT | + |
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Preference number: 2 (lower is better) Translates to: EEPILSLWSETKELTNRGREQVT*GGEGEC Trigger: ACATTCCCCCTCCCCTCCCCAGGTGACCTGCTCTCT...CCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGATTGGCTCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR-3UTR TCA 90 bp | ACTAAGGAGTTAACCAATCGAGGGAAGATGAACTACCCACAAATTGGTCCTCACCACAGCCTCAAGCTGTaGCATCCTCAGGCCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: TKELTNRGKMNYPQIGPHHSLKL*HPQASL Trigger: CAGGCTGGCCTGAGGATGTCACAGCTTGAGGCTGTG...GTGAGGACCAATTTGTGGGTAGTTCATCTTCCCTCGATTGGTTAACTCCTTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR-3UTR GCA 90 bp | AGAGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGCTGTGACATCCTCAGCCTGTGTGCATATGTaGGTACTAGACAAGAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: REPGWPPFTPQPQAVTSSACVHM*VLDKRD Trigger: ATCTCTCTTGTCTAGTACGCACATATGCACACAGGC...TGAGGATGTCACAGCTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR-3UTR CCA 90 bp | ACTAAGGAGTTAACCAATCGAGGGAAGATGAACTACCCACAAATTGGTCCTCACGGAAGAGAACCAGGCTaGCCACCTTTCACACCACAG | + |
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Preference number: 2 (lower is better) Translates to: TKELTNRGKMNYPQIGPHGREPG*PPFTPQ Trigger: CTGTGGTGTGAAAGGTGGCCAGCCTGGTTCTCTTCC...GTGAGGACCAATTTGTGGGTAGTTCATCTTCCCTCGATTGGTTAACTCCTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR-3UTR GCA 90 bp | GAAGAGCCAATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGGATGGGAGGTATGTCTaGCTGTGTGCATATGTGCGT | + |
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Preference number: 2 (lower is better) Translates to: EEPILSLWSETKELTNRGDGRYV*LCAYVR Trigger: ACGCACATATGCACACAGGCAGACATACCTCCCATC...CCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGATTGGCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR-3UTR GCA 90 bp | ATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGAAGATGAACGCACCCAAGAGCCTGTaGCCAGGAATGTCTAATTCA | + |
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Preference number: 2 (lower is better) Translates to: ILSLWSETKELTNRGKMNAPKSL*PGMSNS Trigger: TGAATTAGACATTCCTGGGCACAGGCTCTTGGGTGC...GTTCATCTTCCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR CCA 72 bp | ACCTCACGTGAAGGGCCTGAGGGTCAGGCCAGGACCTaGGACTCTGAGCAATGCACCCAAGAGCCTGTGCCC | + |
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Preference number: 3 (lower is better) Translates to: TSREGPEGQART*DSEQCTQEPVP Trigger: GGGCACAGGCTCTTGGGTGCATTGCTCAGAGTCCCAGGTCCTGGCCTGACCCTCAGGCCCTTCACGTGAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR CCA 72 bp | ACCACAGCCTCAAGCTGTGACATCCTCAGGCCAGCCTaGGGACCATGTCATGATGGGAGGTATGTCTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: TTASSCDILRPA*GPCHDGRYVCL Trigger: CAGGCAGACATACCTCCCATCATGACATGGTCCCCAGGCTGGCCTGAGGATGTCACAGCTTGAGGCTGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR CCA 72 bp | GAGGGGGAATGTCCTTTCTGCCATTTACCACCTCTCTaGCAGCCTGAGCAGGGAAGAGAACCAGGCTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: EGECPFCHLPPL*QPEQGREPGWP Trigger: TGGCCAGCCTGGTTCTCTTCCCTGCTCAGGCTGCCAGAGAGGTGGTAAATGGCAGAAAGGACATTCCCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR GCA 72 bp | CCAGCCTGGGGACCATGTCATGATGGGAGGTATGTCTaGCTGTGTGCATATGTGCGTACTAGACAAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: PAWGPCHDGRYV*LCAYVRTRQER Trigger: TCTCTCTTGTCTAGTACGCACATATGCACACAGGCAGACATACCTCCCATCATGACATGGTCCCCAGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR CCA 72 bp | CTAGACAAGAGAGATCAGGGTAGTCAGTGTAGGGACTaGGAGAGTCATGGGAGCTGGGTTTCATGGCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: LDKRDQGSQCRD*ESHGSWVSWQK Trigger: TTTCTGCCATGAAACCCAGCTCCCATGACTCTCCCAGTCCCTACACTGACTACCCTGATCTCTCTTGTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR CCA 72 bp | GTTAACCAATCGAGGGAAGATGAACTACCCACAAATTaGTCCTCACAGACCTCACGTGAAGGGCCTGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: VNQSREDELPTN*SSQTSREGPEG Trigger: ACCCTCAGGCCCTTCACGTGAGGTCTGTGAGGACCAATTTGTGGGTAGTTCATCTTCCCTCGATTGGTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| 3UTR CCA 72 bp | TCTGCTGCCCTCTGGGAAGAGCCAATCTTGAGTCTGTaGTCTGAAACTAAGGAGTTAACCAATCGAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SAALWEEPILSL*SETKELTNRGK Trigger: CTTCCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGATTGGCTCTTCCCAGAGGGCAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR GCA 90 bp | AGCCTGAGCAGGGAAGAGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGAGGGGACCTTGTGGCTaGCGGGGTGGCACTCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: SLSREENQAGHLSHHSLKRGPCG*RGGTPR Trigger: GCGAGGAGTGCCACCCCGGCAGCCACAAGGTCCCCT...CTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCTCTTCCCTGCTCAGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR GCA 90 bp | AGCCTGAGCAGGGAAGAGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGTGGAGCAGCGGTACCTaGCGTCCGGGAACCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SLSREENQAGHLSHHSLKWSSGT*RPGTWS Trigger: GCTCCAGGTTCCCGGACGGCAGGTACCGCTGCTCCA...CTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCTCTTCCCTGCTCAGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR TCA 90 bp | AGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGCTGTGACATCCTCAGGCTCGAAGCCACAGGCTaGTGGCACAGCAGGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: RTRLATFHTTASSCDILRLEATG*WHSRCL Trigger: CAGGCACCTGCTGTGCCATCAGCCTGTGGCTTCGAG...CCTGAGGATGTCACAGCTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR TCA 90 bp | AGCCTGAGCAGGGAAGAGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGCAGGACCTGGGACTCTaGGCAATGCACCCAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SLSREENQAGHLSHHSLKQDLGL*AMHPRA Trigger: GGCTCTTGGGTGCATTGCTCAGAGTCCCAGGTCCTG...CTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCTCTTCCCTGCTCAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR GCA 90 bp | GTACTAGACAAGAGAGATCAGGGTAGTCAGTGTAGGGACTGGGAGAGTCATGGGCCCGCCCCAGCGGGGTaGACATCCGCAGCCCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: VLDKRDQGSQCRDWESHGPAPAG*TSAALE Trigger: TTCGAGGGCTGCGGATGTGCACCCCGCTGGGGCGGG...CCCATGACTCTCCCAGTCCCTACACTGACTACCCTGATCTCTCTTGTCTAGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR CCA 90 bp | AGAGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGCTGTGACATCCTCAGTGCCTGCCCCACACTaGACATCCCGCTCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: REPGWPPFTPQPQAVTSSVPAPH*TSRSQA Trigger: GGCCTGTGAGCGGGATGTCCAGTGTGGGGCAGGCAC...TGAGGATGTCACAGCTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR TCA 90 bp | AGCCTGAGCAGGGAAGAGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGGGGGCCTCAGAGGCATaGCAATTCTGGCAGAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SLSREENQAGHLSHHSLKGASEA*QFWQKV Trigger: GACCTTCTGCCAGAATTGTCATGCCTCTGAGGCCCC...CTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCTCTTCCCTGCTCAGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR TCA 90 bp | CTGTCCCTTGCTCCCACCCCAATCTGGACAGAGGACTGCCCTCCTCAAAGTCACGTTGCCTCCCTGGTCTaGATCAGTGCCCCTTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LSLAPTPIWTEDCPPQSHVASLV*ISAPFS Trigger: GCTGAAAGGGGCACTGATTCAGACCAGGGAGGCAAC...GTGACTTTGAGGAGGGCAGTCCTCTGTCCAGATTGGGGTGGGAGCAAGGGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR CCA 90 bp | AGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGCTGTGACATCCTCAGGGGTCAGGCCAGGACCTaGGACTCTGAGCAATGCACC | + |
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Preference number: 4 (lower is better) Translates to: RTRLATFHTTASSCDILRGQART*DSEQCT Trigger: GGTGCATTGCTCAGAGTCCCAGGTCCTGGCCTGACC...CCTGAGGATGTCACAGCTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR CCA 90 bp | CTGTCCCTTGCTCCCACCCCAATCTGGACAGAGGACTGCCCTCCTCAAAGTCACAAGCCACAGGCTGACTaGGACCAGAGTCTTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LSLAPTPIWTEDCPPQSHKPQAD*DQSLQG Trigger: CCCCTGAAGACTCTGGTCCCAGTCAGCCTGTGGCTT...GTGACTTTGAGGAGGGCAGTCCTCTGTCCAGATTGGGGTGGGAGCAAGGGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR TCA 90 bp | AGAGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGCTGTGACATCCTCACACAGCCTCAAGCTGTaGCATCCTCAGGCCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: REPGWPPFTPQPQAVTSSHSLKL*HPQASL Trigger: CAGGCTGGCCTGAGGATGTCACAGCTTGAGGCTGTG...TGAGGATGTCACAGCTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGCCAGCAGGTTGGTGTGTAGTTGCCTCCCTGGTCTGAATCAGTGCCCCACCTCTCTGGCAGCCTaGGCAGGGAAGAGAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: SKASRLVCSCLPGLNQCPTSLAA*AGKRTR Trigger: CCTGGTTCTCTTCCCTGCTCAGGCTGCCAGAGAGGT...GGGGCACTGATTCAGACCAGGGAGGCAACTACACACCAACCTGCTGGCTTTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR GCA 90 bp | TCTAAAGCCAGCAGGTTGGTGTGTAGTTGCCTCCCTGGTCTGAATCAGTGCCCCTGGGCTCCCTACACCTaGCTTGGGGTGACTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SKASRLVCSCLPGLNQCPWAPYT*LGVTVC Trigger: GCAGACAGTCACCCCAAGGCAGGTGTAGGGAGCCCA...GGGGCACTGATTCAGACCAGGGAGGCAACTACACACCAACCTGCTGGCTTTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR CCA 90 bp | TCTAAAGCCAGCAGGTTGGTGTGTAGTTGCCTCCCTGGTCTGAATCAGTGCCCCAGAGAGCAGGTCACCTaGGGAGGGGAGGGGGAATGT | + |
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Preference number: 4 (lower is better) Translates to: SKASRLVCSCLPGLNQCPREQVT*GGEGEC Trigger: ACATTCCCCCTCCCCTCCCCAGGTGACCTGCTCTCT...GGGGCACTGATTCAGACCAGGGAGGCAACTACACACCAACCTGCTGGCTTTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR GCA 90 bp | CTCTCTGGCAGCCTGAGCAGGGAAGAGAACCAGGCTGGCCACCTTTCACACCACGATGGGAGGTATGTCTaGCTGTGTGCATATGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: LSGSLSREENQAGHLSHHDGRYV*LCAYVR Trigger: ACGCACATATGCACACAGGCAGACATACCTCCCATC...GTGGTGTGAAAGGTGGCCAGCCTGGTTCTCTTCCCTGCTCAGGCTGCCAGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR CCA 90 bp | GTACTAGACAAGAGAGATCAGGGTAGTCAGTGTAGGGACTGGGAGAGTCATGGGAAGAAGGGGACCTTGTaGCTGCCGGGGTGGCACTCC | + |
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Preference number: 4 (lower is better) Translates to: VLDKRDQGSQCRDWESHGKKGTL*LPGWHS Trigger: GGAGTGCCACCCCGGCAGCCACAAGGTCCCCTTCTT...CCCATGACTCTCCCAGTCCCTACACTGACTACCCTGATCTCTCTTGTCTAGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR CCA 90 bp | AGCCTGAGCAGGGAAGAGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGCATTTACCACCTCTCTaGCAGCCTGAGCAGGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SLSREENQAGHLSHHSLKHLPPL*QPEQGR Trigger: TCTTCCCTGCTCAGGCTGCCAGAGAGGTGGTAAATG...CTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCTCTTCCCTGCTCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR CCA 90 bp | AGCCTGAGCAGGGAAGAGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGCTGTCTGCTGCCCTCTaGGAAGAGCCAATCTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: SLSREENQAGHLSHHSLKLSAAL*EEPILS Trigger: ACTCAAGATTGGCTCTTCCCAGAGGGCAGCAGACAG...CTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCTCTTCCCTGCTCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGCCAGCAGGTTGGTGTGTAGTTGCCTCCCTGGTCTGAATCAGTGCCCCCTGGGGACCATGTCATaGTGGGAGGTATGTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SKASRLVCSCLPGLNQCPLGTMS*WEVCLP Trigger: AGGCAGACATACCTCCCATCATGACATGGTCCCCAG...GGGGCACTGATTCAGACCAGGGAGGCAACTACACACCAACCTGCTGGCTTTAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR TCA 90 bp | CTCTCTGGCAGCCTGAGCAGGGAAGAGAACCAGGCTGGCCACCTTTCACACCACCCAATCGAGGGAAGATaGACTACCCACAAATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSGSLSREENQAGHLSHHPIEGR*TTHKLV Trigger: GACCAATTTGTGGGTAGTTCATCTTCCCTCGATTGG...GTGGTGTGAAAGGTGGCCAGCCTGGTTCTCTTCCCTGCTCAGGCTGCCAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR TCA 90 bp | ATGAACTACCCACAAATTGGTCCTCACAGACCTCACGTGAAGGGCCTGAGGGTCCCACAAGCCACAGGCTaGCTGGGACCAGAGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MNYPQIGPHRPHVKGLRVPQATG*LGPESS Trigger: TGAAGACTCTGGTCCCAGTCAGCCTGTGGCTTGTGG...GACCCTCAGGCCCTTCACGTGAGGTCTGTGAGGACCAATTTGTGGGTAGTTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCTTGCTCCCACCCCAATCTGGACAGAGGACTGCCCTCCTCAAAGTCACCCTCTCATGGTCACTTaGGGTGAAGGCAAAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLAPTPIWTEDCPPQSHPLMVT*GEGKTL Trigger: CAGTGTTTTGCCTTCACCCCAAGTGACCATGAGAGG...GTGACTTTGAGGAGGGCAGTCCTCTGTCCAGATTGGGGTGGGAGCAAGGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | AGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGCTGTGACATCCTCAGGTGTTCTTCAAGTCCATaGAGCAGCGGTACCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RTRLATFHTTASSCDILRCSSSP*SSGTCR Trigger: ACGGCAGGTACCGCTGCTCCATGGACTTGAAGAACA...CCTGAGGATGTCACAGCTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR TCA 90 bp | AATCCAGGCTGTGCTCAGGAAAAGGATGGTGGGTATCCTGAGACCAGGCAAGCGTTACTAGGAGGAGCATaGTTGAGACTCGCGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NPGCAQEKDGGYPETRQALLGGA*LRLAWH Trigger: GTGCCACGCGAGTCTCAATCATGCTCCTCCTAGTAA...CGCTTGCCTGGTCTCAGGATACCCACCATCCTTTTCCTGAGCACAGCCTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR TCA 90 bp | GAAGAGCCAATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGGAGTCTTCAGGGGGCTaGTTGGCCTCCCTGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EEPILSLWSETKELTNRGESSGG*LASLGS Trigger: GGAGCCCAGGGAGGCCAATCAGCCCCCTGAAGACTC...CCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGATTGGCTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR GCA 90 bp | AGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGCTGTGACATCCTCAGGGGGGAATGTCCTTTCTaGCATTTACCACCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTRLATFHTTASSCDILRGECPF*HLPPLW Trigger: CCAGAGAGGTGGTAAATGGCAGAAAGGACATTCCCC...CCTGAGGATGTCACAGCTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR GCA 90 bp | GTACTAGACAAGAGAGATCAGGGTAGTCAGTGTAGGGACTGGGAGAGTCATGGGGGGGTGACTGTCTGCTaGCCTCTGGGAAGAGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLDKRDQGSQCRDWESHGGVTVC*PLGRAN Trigger: ATTGGCTCTTCCCAGAGGGCAGCAGACAGTCACCCC...CCCATGACTCTCCCAGTCCCTACACTGACTACCCTGATCTCTCTTGTCTAGTAC 54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR GCA 90 bp | AGAACCAGGCTGGCCACCTTTCACACCACAGCCTCAAGCTGTGACATCCTCAGGATCTGGACAGAGGACTaGCCTCCTCAAAGTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTRLATFHTTASSCDILRIWTED*PPQSHQ Trigger: TTGGTGACTTTGAGGAGGGCAGTCCTCTGTCCAGAT...CCTGAGGATGTCACAGCTTGAGGCTGTGGTGTGAAAGGTGGCCAGCCTGGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | ATGAACTACCCACAAATTGGTCCTCACAGACCTCACGTGAAGGGCCTGAGGGTCAGTCAGTGTAGGGACTaGGAGAGTCATGGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MNYPQIGPHRPHVKGLRVSQCRD*ESHGSW Trigger: CCAGCTCCCATGACTCTCCCAGTCCCTACACTGACT...GACCCTCAGGCCCTTCACGTGAGGTCTGTGAGGACCAATTTGTGGGTAGTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCTTGCTCCCACCCCAATCTGGACAGAGGACTGCCCTCCTCAAAGTCACGAACTACCCACAAATTaGTCCTCACAGACCTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLAPTPIWTEDCPPQSHELPTN*SSQTSR Trigger: ACGTGAGGTCTGTGAGGACCAATTTGTGGGTAGTTC...GTGACTTTGAGGAGGGCAGTCCTCTGTCCAGATTGGGGTGGGAGCAAGGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCTTGCTCCCACCCCAATCTGGACAGAGGACTGCCCTCCTCAAAGTCACGCCTGTGTGCATATGTaGGTACTAGACAAGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLAPTPIWTEDCPPQSHACVHM*VLDKRD Trigger: ATCTCTCTTGTCTAGTACGCACATATGCACACAGGC...GTGACTTTGAGGAGGGCAGTCCTCTGTCCAGATTGGGGTGGGAGCAAGGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR GCA 90 bp | TCTAAAGCCAGCAGGTTGGTGTGTAGTTGCCTCCCTGGTCTGAATCAGTGCCCCAGGTTGGTGTGTAGTTaGCTCCCTGGTCTGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKASRLVCSCLPGLNQCPRLVCS*LPGLNQ Trigger: CTGATTCAGACCAGGGAGGCAACTACACACCAACCT...GGGGCACTGATTCAGACCAGGGAGGCAACTACACACCAACCTGCTGGCTTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | GAAGAGCCAATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGCTTCAGGGGGCTGATTaGCCTCCCTGGGCTCCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: EEPILSLWSETKELTNRGLQGAD*PPWAPY Trigger: GTAGGGAGCCCAGGGAGGCCAATCAGCCCCCTGAAG...CCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGATTGGCTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | ATGAACTACCCACAAATTGGTCCTCACAGACCTCACGTGAAGGGCCTGAGGGTCCTAAAGCCAGCAGGTTaGTGTGTAGTTGCCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MNYPQIGPHRPHVKGLRVLKPAG*CVVASL Trigger: CAGGGAGGCAACTACACACCAACCTGCTGGCTTTAG...GACCCTCAGGCCCTTCACGTGAGGTCTGTGAGGACCAATTTGTGGGTAGTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR TCA 90 bp | TCTAAAGCCAGCAGGTTGGTGTGTAGTTGCCTCCCTGGTCTGAATCAGTGCCCCGGGAAGAGCCAATCTTaGGTCTGTGGTCTGAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: SKASRLVCSCLPGLNQCPGKSQS*VCGLKL Trigger: TAGTTTCAGACCACAGACTCAAGATTGGCTCTTCCC...GGGGCACTGATTCAGACCAGGGAGGCAACTACACACCAACCTGCTGGCTTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR TCA 90 bp | GAAGAGCCAATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGGCTCACAGGCCCCTGTaGTCACAGCACAGTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: EEPILSLWSETKELTNRGAHRPL*SQHSQT Trigger: TGTCTGACTGTGCTGTGATCACAGGGGCCTGTGAGC...CCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGATTGGCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR TCA 90 bp | ATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGAAGATGAACACACCTGCCTTGGGGTaGCTGTCTGCTGCCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILSLWSETKELTNRGKMNTPALG*LSAALW Trigger: CCAGAGGGCAGCAGACAGTCACCCCAAGGCAGGTGT...GTTCATCTTCCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR GCA 90 bp | GAAGAGCCAATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGCACTGCCTGCTTAGATaGCTCTCGCTTCCTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEPILSLWSETKELTNRGHCLLR*LSLPPA Trigger: AGCGGGAGGAAGCGAGAGGCATCTAAGCAGGCAGTG...CCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGATTGGCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR GCA 90 bp | GTACTAGACAAGAGAGATCAGGGTAGTCAGTGTAGGGACTGGGAGAGTCATGGGGTGAAGGCAAAACACTaGCTGCTTAGATGCCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VLDKRDQGSQCRDWESHGVKAKH*LLRCLS Trigger: CGAGAGGCATCTAAGCAGGCAGTGTTTTGCCTTCAC...CCCATGACTCTCCCAGTCCCTACACTGACTACCCTGATCTCTCTTGTCTAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR GCA 90 bp | ATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGAAGATGAACTTTCAGCCCCTGCCCTaGTCCCTGTCCCTTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILSLWSETKELTNRGKMNFQPLP*SLSLAP Trigger: GGGAGCAAGGGACAGGGAGCAGGGCAGGGGCTGAAA...GTTCATCTTCCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | GAAGAGCCAATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGGCGTGGCACCTCTCATaGTCACTTGGGGTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EEPILSLWSETKELTNRGAWHLS*SLGVKA Trigger: TGCCTTCACCCCAAGTGACCATGAGAGGTGCCACGC...CCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGATTGGCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | GAAGAGCCAATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGATCCTCAGGCCAGCCTaGGGACCATGTCATGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: EEPILSLWSETKELTNRGILRPA*GPCHDG Trigger: CCCATCATGACATGGTCCCCAGGCTGGCCTGAGGAT...CCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGATTGGCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCTTGCTCCCACCCCAATCTGGACAGAGGACTGCCCTCCTCAAAGTCACCCAATCTTGAGTCTGTaGTCTGAAACTAAGGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLAPTPIWTEDCPPQSHPILSL*SETKEL Trigger: TAACTCCTTAGTTTCAGACCACAGACTCAAGATTGG...GTGACTTTGAGGAGGGCAGTCCTCTGTCCAGATTGGGGTGGGAGCAAGGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | CTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGAAGATGAACTACCCACAATCCCTACACCTGCCTTaGGGTGACTGTCTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWSETKELTNRGKMNYPQSLHLP*GDCLLP Trigger: GGGCAGCAGACAGTCACCCCAAGGCAGGTGTAGGGA...TTGTGGGTAGTTCATCTTCCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | CTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGAAGATGAACTACCCACAAGCTCCCACCCCAATCTaGACAGAGGACTGCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWSETKELTNRGKMNYPQAPTPI*TEDCPP Trigger: AGGAGGGCAGTCCTCTGTCCAGATTGGGGTGGGAGC...TTGTGGGTAGTTCATCTTCCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR TCA 90 bp | TCTAAAGCCAGCAGGTTGGTGTGTAGTTGCCTCCCTGGTCTGAATCAGTGCCCCCAAGCGCCTAAAAATTaGTGTTCTTCAAGTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SKASRLVCSCLPGLNQCPQAPKN*CSSSPW Trigger: CCATGGACTTGAAGAACATCAATTTTTAGGCGCTTG...GGGGCACTGATTCAGACCAGGGAGGCAACTACACACCAACCTGCTGGCTTTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR GCA 90 bp | ATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGAAGATGAACCTTGGGGTGACTGTCTaGTGCCCTCTGGGAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILSLWSETKELTNRGKMNLGVTV*CPLGRA Trigger: GGCTCTTCCCAGAGGGCAGCAGACAGTCACCCCAAG...GTTCATCTTCCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR GCA 90 bp | ATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGAAGATGAACCTGCTCCCTGTCCCTTaGTCCCACCCCAATCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILSLWSETKELTNRGKMNLLPVP*SHPNLD Trigger: GTCCAGATTGGGGTGGGAGCAAGGGACAGGGAGCAG...GTTCATCTTCCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR GCA 90 bp | ATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGAAGATGAACCCTGGTCTGAATCAGTaGCCCTTTCAGCCCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILSLWSETKELTNRGKMNPGLNQ*PFQPLP Trigger: GGGCAGGGGCTGAAAGGGGCACTGATTCAGACCAGG...GTTCATCTTCCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR TCA 90 bp | ATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGAAGATGAACGGTGCTTGCGTTTCCTaGAGAAGGGGACCTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILSLWSETKELTNRGKMNGACVS*RRGPCG Trigger: GCCACAAGGTCCCCTTCTTCAGGAAACGCAAGCACC...GTTCATCTTCCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR TCA 90 bp | GAAGAGCCAATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGACCTGCTCTCAGGGCTaGTCCTTGGAAAGGAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EEPILSLWSETKELTNRGTCSQG*SLERSC Trigger: ACAACTCCTTTCCAAGGATCAGCCCTGAGAGCAGGT...CCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGATTGGCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | ACTAAGGAGTTAACCAATCGAGGGAAGATGAACTACCCACAAATTGGTCCTCACGGACTGGGAGAGTCATaGGAGCTGGGTTTCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKELTNRGKMNYPQIGPHGLGES*ELGFMA Trigger: TGCCATGAAACCCAGCTCCCATGACTCTCCCAGTCC...GTGAGGACCAATTTGTGGGTAGTTCATCTTCCCTCGATTGGTTAACTCCTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR GCA 90 bp | GAAGAGCCAATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGAGGCAAAACACTGCCTaGTTAGATGCCTCTCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EEPILSLWSETKELTNRGRQNTA*LDASRF Trigger: GAAGCGAGAGGCATCTAAGCAGGCAGTGTTTTGCCT...CCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGATTGGCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR GCA 90 bp | GAAGAGCCAATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGGCACCCAAGAGCCTGTaGCCAGGAATGTCTAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: EEPILSLWSETKELTNRGAPKSL*PGMSNS Trigger: TGAATTAGACATTCCTGGGCACAGGCTCTTGGGTGC...CCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGATTGGCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | ATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGAAGATGAACGGAAGAGAACCAGGCTaGCCACCTTTCACACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ILSLWSETKELTNRGKMNGREPG*PPFTPQ Trigger: CTGTGGTGTGAAAGGTGGCCAGCCTGGTTCTCTTCC...GTTCATCTTCCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR GCA 90 bp | ACTAAGGAGTTAACCAATCGAGGGAAGATGAACTACCCACAAATTGGTCCTCACCAAGGACAGGTGTGGTaGTTGCGTTTCCTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKELTNRGKMNYPQIGPHQGQVW*LRFLKK Trigger: CTTCTTCAGGAAACGCAAGCACCACACCTGTCCTTG...GTGAGGACCAATTTGTGGGTAGTTCATCTTCCCTCGATTGGTTAACTCCTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | ACTAAGGAGTTAACCAATCGAGGGAAGATGAACTACCCACAAATTGGTCCTCACAAGCAAGGACAGGTGTaGTGCTTGCGTTTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKELTNRGKMNYPQIGPHKQGQV*CLRFLK Trigger: CTTCAGGAAACGCAAGCACCACACCTGTCCTTGCTT...GTGAGGACCAATTTGTGGGTAGTTCATCTTCCCTCGATTGGTTAACTCCTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CCA 90 bp | CTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGAAGATGAACTACCCACAATTAATGGAAAAGCTGTaGGAATTGGGGGCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWSETKELTNRGKMNYPQLMEKL*ELGASV Trigger: CACTGAAGCCCCCAATTCCCACAGCTTTTCCATTAA...TTGTGGGTAGTTCATCTTCCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS CCA 90 bp | TCCGGGAACCTGGAGCACAGCAGGTTGGGCAAGCAAGGACAGGTGTaGTGCTTGCGTTTCCTGAAGAAGGGGACCTTGTGGCTGCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SGNLEHSRLGKQGQV*CLRFLKKGTLWLPG Trigger: CCCCGGCAGCCACAAGGTCCCCTTCTTCAGGAAACGCAAGCACCACACCTGTCCTTGCTTGCCCAACCTGCTGTGCTCCAGGTTCCCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS CCA 90 bp | TGTTCTTCAAGTCCATGGAGCAGCGGTACCTGCCGTCCGGGAACCTaGAGCACAGCAGGTTGGGCAAGCAAGGACAGGTGTGGTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSSSPWSSGTCRPGT*STAGWASKDRCGAC Trigger: GCAAGCACCACACCTGTCCTTGCTTGCCCAACCTGCTGTGCTCCAGGTTCCCGGACGGCAGGTACCGCTGCTCCATGGACTTGAAGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CAA 90 bp | TCTAAAGCCAGCAGGTTGGTGTGTAGTTGCCTCCCTGGTCTGAATCAGTGCCCCCTGAAGAAGGGGACCTaGTGGCTGCCGGGGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SKASRLVCSCLPGLNQCPLKKGT*WLPGWH Trigger: GTGCCACCCCGGCAGCCACAAGGTCCCCTTCTTCAG...GGGGCACTGATTCAGACCAGGGAGGCAACTACACACCAACCTGCTGGCTTTAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CAA 90 bp | GTACTAGACAAGAGAGATCAGGGTAGTCAGTGTAGGGACTGGGAGAGTCATGGGGGACAGGTGTGGTGCTaGCGTTTCCTGAAGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLDKRDQGSQCRDWESHGGQVWC*RFLKKG Trigger: CCCCTTCTTCAGGAAACGCAAGCACCACACCTGTCC...CCCATGACTCTCCCAGTCCCTACACTGACTACCCTGATCTCTCTTGTCTAGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CAA 90 bp | AATCCAGGCTGTGCTCAGGAAAAGGATGGTGGGTATCCTGAGACCAGGCAAGCGTCTAAAGCCAGCAGGTaGGTGTGTAGTTGCCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: NPGCAQEKDGGYPETRQASKASR*VCSCLP Trigger: AGGGAGGCAACTACACACCAACCTGCTGGCTTTAGA...CGCTTGCCTGGTCTCAGGATACCCACCATCCTTTTCCTGAGCACAGCCTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS TCA 90 bp | GAAAAGGATGGTGGGTATCCTGAGACCAGGCAAGCGCCTAAAAATTaGTGTTCTTCAAGTCCATGGAGCAGCGGTACCTGCCGTCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: EKDGGYPETRQAPKN*CSSSPWSSGTCRPG Trigger: TCCCGGACGGCAGGTACCGCTGCTCCATGGACTTGAAGAACATCAATTTTTAGGCGCTTGCCTGGTCTCAGGATACCCACCATCCTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CAA 90 bp | GAAGAGCCAATCTTGAGTCTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGCCTGCTCCCTGTCCCTaGCTCCCACCCCAATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EEPILSLWSETKELTNRGPAPCP*LPPQSG Trigger: TCCAGATTGGGGTGGGAGCAAGGGACAGGGAGCAGG...CCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAGACTCAAGATTGGCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
||
| CDS-3UTR CAA 90 bp | CTGTGGTCTGAAACTAAGGAGTTAACCAATCGAGGGAAGATGAACTACCCACAACTGGAGCACAGCAGGTaGGGCAAGCAAGGACAGGTG | + |
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Preference number: 5 (lower is better) Translates to: LWSETKELTNRGKMNYPQLEHSR*GKQGQV Trigger: CACCTGTCCTTGCTTGCCCAACCTGCTGTGCTCCAG...TTGTGGGTAGTTCATCTTCCCTCGATTGGTTAACTCCTTAGTTTCAGACCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS-3UTR CAA 90 bp | GTACTAGACAAGAGAGATCAGGGTAGTCAGTGTAGGGACTGGGAGAGTCATGGGTGGGAAGAGCCAATCTaGAGTCTGTGGTCTGAAACT | + |
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Preference number: 5 (lower is better) Translates to: VLDKRDQGSQCRDWESHGWEEPI*SLWSET Trigger: AGTTTCAGACCACAGACTCAAGATTGGCTCTTCCCA...CCCATGACTCTCCCAGTCCCTACACTGACTACCCTGATCTCTCTTGTCTAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS TCA 72 bp | GCGGGGTGCACATCCGCAGCCCTCGAAGCCACAGGCTaGTGGCACAGCAGGTGCCTGCCCCACACTGGACAT | + |
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Preference number: 6 (lower is better) Translates to: AGCTSAALEATG*WHSRCLPHTGH Trigger: ATGTCCAGTGTGGGGCAGGCACCTGCTGTGCCATCAGCCTGTGGCTTCGAGGGCTGCGGATGTGCACCCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS CCA 72 bp | CACAGGCTGATGGCACAGCAGGTGCCTGCCCCACACTaGACATCCCGCTCACAGGCCCCTGTGATCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: HRLMAQQVPAPH*TSRSQAPVITA Trigger: TGCTGTGATCACAGGGGCCTGTGAGCGGGATGTCCAGTGTGGGGCAGGCACCTGCTGTGCCATCAGCCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS CCA 72 bp | AGTCCATGGAGCAGCGGTACCTGCCGTCCGGGAACCTaGAGCACAGCAGGTTGGGCAAGCAAGGACAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: SPWSSGTCRPGT*STAGWASKDRC Trigger: ACACCTGTCCTTGCTTGCCCAACCTGCTGTGCTCCAGGTTCCCGGACGGCAGGTACCGCTGCTCCATGGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS CAA 72 bp | CACAGCAGGTTGGGCAAGCAAGGACAGGTGTGGTGCTaGCGTTTCCTGAAGAAGGGGACCTTGTGGCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: HSRLGKQGQVWC*RFLKKGTLWLP Trigger: CGGCAGCCACAAGGTCCCCTTCTTCAGGAAACGCAAGCACCACACCTGTCCTTGCTTGCCCAACCTGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS CCA 72 bp | CTGGAGCACAGCAGGTTGGGCAAGCAAGGACAGGTGTaGTGCTTGCGTTTCCTGAAGAAGGGGACCTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LEHSRLGKQGQV*CLRFLKKGTLW Trigger: CCACAAGGTCCCCTTCTTCAGGAAACGCAAGCACCACACCTGTCCTTGCTTGCCCAACCTGCTGTGCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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| CDS TCA 72 bp | TCACAGCACAGTCAGACACAGTTACTAGGAGGAGCATaGTTGAGACTCGCGTGGCACCTCTCATGGTCACTT | + |
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Preference number: 6 (lower is better) Translates to: SQHSQTQLLGGA*LRLAWHLSWSL Trigger: AAGTGACCATGAGAGGTGCCACGCGAGTCTCAATCATGCTCCTCCTAGTAACTGTGTCTGACTGTGCTGTGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271331.4 |
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