Pregenerated sensors for PRODH (Homo sapiens)
Ensembl gene IDs: ENSG00000100033Ensembl transcript IDs: ENST00000313755.9, ENST00000334029.6, ENST00000357068.11, ENST00000399694.1, ENST00000420436.5, ENST00000429300.5, ENST00000438924.5, ENST00000450579.1, ENST00000457083.1, ENST00000482858.5, ENST00000491604.5, ENST00000496625.1, ENST00000609229.1, ENST00000610940.4
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGCTGGCTGCCCCCTCCCCTGCTGGTGTGCACAGCCTCTGCCATGTaGCTGCGGCTCCTCCCAGCACAGGACAGTGGCTCACTCCACCTG | + |
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Preference number: 5 (lower is better) Translates to: CWLPPPLLVCTASAM*LRLLPAQDSGSLHL Trigger: CAGGTGGAGTGAGCCACTGTCCTGTGCTGGGAGGAGCCGCAGTCACATGGCAGAGGCTGTGCACACCAGCAGGGGAGGGGGCAGCCAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609229.1 |
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| CDS GCA 90 bp | GTGCCACTGCTGGCTGCCCCCTCCCCTGCTGGTGTGCACAGCCTCTaGCATGTGACTGCGGCTCCTCCCAGCACAGGACAGTGGCTCACT | + |
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Preference number: 5 (lower is better) Translates to: VPLLAAPSPAGVHSL*HVTAAPPSTGQWLT Trigger: AGTGAGCCACTGTCCTGTGCTGGGAGGAGCCGCAGTCACATGGCAGAGGCTGTGCACACCAGCAGGGGAGGGGGCAGCCAGCAGTGGCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609229.1 |
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| CDS CCA 90 bp | CTGTCAGAAGCCACAGGAAAAGCCATGACAGCCCTGAGAGGTGCATaGAGGCAGCGCAGGGTGCGACAGGGAGGGCCAGGGCCTGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LSEATGKAMTALRGA*RQRRVRQGGPGPGQ Trigger: CTGGCCAGGCCCTGGCCCTCCCTGTCGCACCCTGCGCTGCCTCCATGCACCTCTCAGGGCTGTCATGGCTTTTCCTGTGGCTTCTGACAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399694.1 ENST00000429300.5 |
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| CDS TCA 90 bp | CCTCGGGGCTCAGGTCCTCCTCCACTCCATAGTCCAGGATGGCGCTaGCACCGAAGGCCCTGTAGTGCCGAAGCAGGGGCTGGATGGACT | + |
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Preference number: 5 (lower is better) Translates to: PRGSGPPPLHSPGWR*HRRPCSAEAGAGWT Trigger: AGTCCATCCAGCCCCTGCTTCGGCACTACAGGGCCTTCGGTGTCAGCGCCATCCTGGACTATGGAGTGGAGGAGGACCTGAGCCCCGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000334029.6 ENST00000357068.11 ENST00000420436.5 ENST00000450579.1 ENST00000482858.5 ENST00000491604.5 ENST00000496625.1 ENST00000610940.4 |
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| CDS GCA 90 bp | ACAGTGAGGGACCCAAGTGTGGTCAGAACCCAGCCCTCTGGCTCCTaGCCCAGCTTAGTGTTCACCCACCGGCACCTCCATGAGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: TVRDPSVVRTQPSGS*PSLVFTHRHLHEPR Trigger: CCTGGGCTCATGGAGGTGCCGGTGGGTGAACACTAAGCTGGGGCAGGAGCCAGAGGGCTGGGTTCTGACCACACTTGGGTCCCTCACTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496625.1 |
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| CDS CCA 90 bp | CACAGCCTCTGCCATGTGACTGCGGCTCCTCCCAGCACAGGACAGTaGCTCACTCCACCTGGCATCTGGGCTTGGCCTCGTGAGGCACTT | + |
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Preference number: 5 (lower is better) Translates to: HSLCHVTAAPPSTGQ*LTPPGIWAWPREAL Trigger: AAGTGCCTCACGAGGCCAAGCCCAGATGCCAGGTGGAGTGAGCCACTGTCCTGTGCTGGGAGGAGCCGCAGTCACATGGCAGAGGCTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609229.1 |
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| CDS CCA 90 bp | GTGCGGGCACTGATGACACCATTCCTGCGGTCCCCGAAGGCCCAGTaGGCCTGGTATTGCTTGTCCCGCTTATTCGTGCCACTGCCATCC | + |
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Preference number: 5 (lower is better) Translates to: VRALMTPFLRSPKAQ*AWYCLSRLFVPLPS Trigger: GGATGGCAGTGGCACGAATAAGCGGGACAAGCAATACCAGGCCCACTGGGCCTTCGGGGACCGCAGGAATGGTGTCATCAGTGCCCGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000334029.6 ENST00000357068.11 ENST00000420436.5 ENST00000438924.5 ENST00000450579.1 ENST00000457083.1 ENST00000482858.5 ENST00000491604.5 ENST00000496625.1 ENST00000610940.4 |
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| CDS GCA 90 bp | AAGCCCAAGCCACAGCCAGCACCAACTCCCAGACATGTGAATGGGTaGCTCCCCCAGGTCCCAGCGCCACCACTCTGTGAGTACAGCTAC | + |
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Preference number: 5 (lower is better) Translates to: KPKPQPAPTPRHVNG*LPQVPAPPLCEYSY Trigger: GTAGCTGTACTCACAGAGTGGTGGCGCTGGGACCTGGGGGAGGCACCCATTCACATGTCTGGGAGTTGGTGCTGGCTGTGGCTTGGGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000313755.9 ENST00000482858.5 ENST00000609229.1 |
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| CDS CCA 90 bp | GCACTGATGACACCATTCCTGCGGTCCCCGAAGGCCCAGTGGGCCTaGTATTGCTTGTCCCGCTTATTCGTGCCACTGCCATCCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: ALMTPFLRSPKAQWA*YCLSRLFVPLPSLS Trigger: GGAGAGGGATGGCAGTGGCACGAATAAGCGGGACAAGCAATACCAGGCCCACTGGGCCTTCGGGGACCGCAGGAATGGTGTCATCAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000334029.6 ENST00000357068.11 ENST00000420436.5 ENST00000438924.5 ENST00000450579.1 ENST00000457083.1 ENST00000482858.5 ENST00000491604.5 ENST00000496625.1 ENST00000610940.4 |
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| CDS TCA 90 bp | TTGGGAAAAAGCCCAAGCCACAGCCAGCACCAACTCCCAGACATGTaGATGGGTGCCTCCCCCAGGTCCCAGCGCCACCACTCTGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: LGKSPSHSQHQLPDM*MGASPRSQRHHSVS Trigger: ACTCACAGAGTGGTGGCGCTGGGACCTGGGGGAGGCACCCATTCACATGTCTGGGAGTTGGTGCTGGCTGTGGCTTGGGCTTTTTCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000313755.9 ENST00000482858.5 ENST00000609229.1 |
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| CDS TCA 90 bp | GCAGGAAAAGGTCACCCAGCTTCTGCCTGGCTCTCACGTCTCAGGTaGCACTGGCCCTTAGAGCCCAGCTGCCATGTTGGGAAAAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: AGKGHPASAWLSRLR*HWPLEPSCHVGKKP Trigger: GGGCTTTTTCCCAACATGGCAGCTGGGCTCTAAGGGCCAGTGTCACCTGAGACGTGAGAGCCAGGCAGAAGCTGGGTGACCTTTTCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000313755.9 ENST00000482858.5 ENST00000609229.1 |
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| CDS GCA 90 bp | GTGGATGCCCACAGCTGCCCTGAGATCTCGCACAGCACCAGACTCTaGAGGTGGAAGGTTCTAGCACTTACCAGAAACTGGGGTCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: VDAHSCPEISHSTRL*RWKVLALTRNWGLP Trigger: GGGGAGACCCCAGTTTCTGGTAAGTGCTAGAACCTTCCACCTGCAGAGTCTGGTGCTGTGCGAGATCTCAGGGCAGCTGTGGGCATCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429300.5 ENST00000482858.5 |
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| CDS CCA 90 bp | GCCCACAGCTGCCCTGAGATCTCGCACAGCACCAGACTCTGCAGGTaGAAGGTTCTAGCACTTACCAGAAACTGGGGTCTCCCCAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: AHSCPEISHSTRLCR*KVLALTRNWGLPSA Trigger: AGCACTGGGGAGACCCCAGTTTCTGGTAAGTGCTAGAACCTTCCACCTGCAGAGTCTGGTGCTGTGCGAGATCTCAGGGCAGCTGTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429300.5 ENST00000482858.5 |
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| CDS CCA 90 bp | CCTGCCCTTGCTCCACAGCCATTTGGTGAAAGAAGCACCTCCACTTaGCCAGCACCTCTGAGAACTGCAGCTGAGGCTTCGATGCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: PALAPQPFGERSTST*PAPLRTAAEASMQR Trigger: GCGCTGCATCGAAGCCTCAGCTGCAGTTCTCAGAGGTGCTGGCCAAGTGGAGGTGCTTCTTTCACCAAATGGCTGTGGAGCAAGGGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438924.5 |
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| CDS CCA 90 bp | CTCACGTCTCAGGTGACACTGGCCCTTAGAGCCCAGCTGCCATGTTaGGAAAAAGCCCAAGCCACAGCCAGCACCAACTCCCAGACATGT | + |
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Preference number: 5 (lower is better) Translates to: LTSQVTLALRAQLPC*EKAQATASTNSQTC Trigger: ACATGTCTGGGAGTTGGTGCTGGCTGTGGCTTGGGCTTTTTCCCAACATGGCAGCTGGGCTCTAAGGGCCAGTGTCACCTGAGACGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000313755.9 ENST00000482858.5 ENST00000609229.1 |
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| CDS CCA 90 bp | CCTGCCCTTGCTCCACAGCCATTTGGTGAAAGAAGCACCTCCACTTaGCCAGCACCTCTGAGAACTGCAGCTGCAAACGCAGGCCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: PALAPQPFGERSTST*PAPLRTAAANAGLN Trigger: ATTCAGGCCTGCGTTTGCAGCTGCAGTTCTCAGAGGTGCTGGCCAAGTGGAGGTGCTTCTTTCACCAAATGGCTGTGGAGCAAGGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429300.5 ENST00000482858.5 |
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| CDS GCA 90 bp | GTGAAAGCAGATCTTACCATCTCATCTTGTTTCACGCCACCCCAATaGAGGGCCTTCCCCTTCCACCTGCCCTGGGAGAACAGGCAATGG | + |
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Preference number: 5 (lower is better) Translates to: VKADLTISSCFTPPQ*RAFPFHLPWENRQW Trigger: CCATTGCCTGTTCTCCCAGGGCAGGTGGAAGGGGAAGGCCCTGCATTGGGGTGGCGTGAAACAAGATGAGATGGTAAGATCTGCTTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429300.5 |
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| CDS GCA 90 bp | CAGGTGGAAGGTTCTAGCACTTACCAGAAACTGGGGTCTCCCCAGTaGTGTGAGCTTAATGGCTATGAAGCCGTCATCGCTGACTCTACC | + |
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Preference number: 5 (lower is better) Translates to: QVEGSSTYQKLGSPQ*CELNGYEAVIADST Trigger: GGTAGAGTCAGCGATGACGGCTTCATAGCCATTAAGCTCACAGCACTGGGGAGACCCCAGTTTCTGGTAAGTGCTAGAACCTTCCACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429300.5 ENST00000482858.5 |
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| CDS CCA 90 bp | AGCACCAGACTCTGCAGGTGGAAGGTTCTAGCACTTACCAGAAACTaGGGTCTCCCCAGTGCTGTGAGCTTAATGGCTATGAAGCCGTCA | + |
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Preference number: 5 (lower is better) Translates to: STRLCRWKVLALTRN*GLPSAVSLMAMKPS Trigger: TGACGGCTTCATAGCCATTAAGCTCACAGCACTGGGGAGACCCCAGTTTCTGGTAAGTGCTAGAACCTTCCACCTGCAGAGTCTGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429300.5 ENST00000482858.5 |
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| CDS TCA 90 bp | GCTTCTAACAAACAGAACTTGCCAGAAAAGACACCGTGTGACTTCTaGGGCGAGGCAGGAAAAGGTCACCCAGCTTCTGCCTGGCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: ASNKQNLPEKTPCDF*GEAGKGHPASAWLS Trigger: TGAGAGCCAGGCAGAAGCTGGGTGACCTTTTCCTGCCTCGCCTCAGAAGTCACACGGTGTCTTTTCTGGCAAGTTCTGTTTGTTAGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000313755.9 ENST00000482858.5 ENST00000609229.1 |
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| CDS TCA 90 bp | CAGATGAGTCTCATTCCTCTCCCCGCTGTATACAGGCTGGCCTGGTaGCATGCTTCTAACAAACAGAACTTGCCAGAAAAGACACCGTGT | + |
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Preference number: 5 (lower is better) Translates to: QMSLIPLPAVYRLAW*HASNKQNLPEKTPC Trigger: ACACGGTGTCTTTTCTGGCAAGTTCTGTTTGTTAGAAGCATGTCACCAGGCCAGCCTGTATACAGCGGGGAGAGGAATGAGACTCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000313755.9 ENST00000482858.5 ENST00000609229.1 |
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| CDS TCA 90 bp | CCTGACACTTCTTTCCAAGCAACAACCAGAAATGTTCCTTTAAAGTaGAAGCAGATCTTACCATCTCATCTTGTTTCACGCCACCCCAAT | + |
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Preference number: 5 (lower is better) Translates to: PDTSFQATTRNVPLK*KQILPSHLVSRHPN Trigger: ATTGGGGTGGCGTGAAACAAGATGAGATGGTAAGATCTGCTTTCACTTTAAAGGAACATTTCTGGTTGTTGCTTGGAAAGAAGTGTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429300.5 |
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| CDS TCA 72 bp | CTGCCCCAGCTTAGTGTTCACCCACCGGCACCTCCATaGGCCCAGGGGTCCGCTCAGGCTGGGACATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LPQLSVHPPAPP*AQGSAQAGTWQ Trigger: CTGCCATGTCCCAGCCTGAGCGGACCCCTGGGCTCATGGAGGTGCCGGTGGGTGAACACTAAGCTGGGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496625.1 |
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| CDS GCA 72 bp | CCACAGCCAGCACCAACTCCCAGACATGTGAATGGGTaGCTCCCCCAGGTCCCAGCGCCACCACTCTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: PQPAPTPRHVNG*LPQVPAPPLCE Trigger: CTCACAGAGTGGTGGCGCTGGGACCTGGGGGAGGCACCCATTCACATGTCTGGGAGTTGGTGCTGGCTGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000313755.9 ENST00000482858.5 ENST00000609229.1 |
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| CDS GCA 72 bp | CTCTCCGCAGCTGAGGTGCAGGACTCCATCTCCTTGTaGTCTGCCTCCTCGGGGCTCAGGTCCTCCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: LSAAEVQDSISL*SASSGLRSSST Trigger: AGTGGAGGAGGACCTGAGCCCCGAGGAGGCAGAGCACAAGGAGATGGAGTCCTGCACCTCAGCTGCGGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000334029.6 ENST00000357068.11 ENST00000420436.5 ENST00000450579.1 ENST00000482858.5 ENST00000491604.5 ENST00000496625.1 ENST00000610940.4 |
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| CDS CCA 72 bp | CTCCACCCTGGGCTAAGTGTGGCTCGGCAGCTGACATaGACCAACTTCCTGCAGCTCCCGATCCTGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LHPGLSVARQLT*TNFLQLPILAL Trigger: CAGGGCCAGGATCGGGAGCTGCAGGAAGTTGGTCCATGTCAGCTGCCGAGCCACACTTAGCCCAGGGTGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496625.1 |
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| CDS CCA 72 bp | TGCCATGTGACTGCGGCTCCTCCCAGCACAGGACAGTaGCTCACTCCACCTGGCATCTGGGCTTGGCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: CHVTAAPPSTGQ*LTPPGIWAWPR Trigger: ACGAGGCCAAGCCCAGATGCCAGGTGGAGTGAGCCACTGTCCTGTGCTGGGAGGAGCCGCAGTCACATGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609229.1 |
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| CDS CAA 72 bp | CTGCGGTCCCCGAAGGCCCAGTGGGCCTGGTATTGCTaGTCCCGCTTATTCGTGCCACTGCCATCCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LRSPKAQWAWYC*SRLFVPLPSLS Trigger: GGAGAGGGATGGCAGTGGCACGAATAAGCGGGACAAGCAATACCAGGCCCACTGGGCCTTCGGGGACCGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000334029.6 ENST00000357068.11 ENST00000420436.5 ENST00000438924.5 ENST00000450579.1 ENST00000457083.1 ENST00000482858.5 ENST00000491604.5 ENST00000496625.1 ENST00000610940.4 |
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| CDS CAA 90 bp | GATGACACCATTCCTGCGGTCCCCGAAGGCCCAGTGGGCCTGGTATaGCTTGTCCCGCTTATTCGTGCCACTGCCATCCCTCTCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: DDTIPAVPEGPVGLV*LVPLIRATAIPLRS Trigger: GCTGCGGAGAGGGATGGCAGTGGCACGAATAAGCGGGACAAGCAATACCAGGCCCACTGGGCCTTCGGGGACCGCAGGAATGGTGTCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000334029.6 ENST00000357068.11 ENST00000420436.5 ENST00000438924.5 ENST00000450579.1 ENST00000457083.1 ENST00000482858.5 ENST00000491604.5 ENST00000496625.1 ENST00000610940.4 |
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| CDS TCA 72 bp | GTGGCTCACTCCACCTGGCATCTGGGCTTGGCCTCGTaGGGCACTTTGGCCAGCAGGGAGGTACCAAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VAHSTWHLGLAS*GTLASREVPKV Trigger: CACCTTTGGTACCTCCCTGCTGGCCAAAGTGCCTCACGAGGCCAAGCCCAGATGCCAGGTGGAGTGAGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609229.1 |
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| CDS CCA 72 bp | ACACCATTCCTGCGGTCCCCGAAGGCCCAGTGGGCCTaGTATTGCTTGTCCCGCTTATTCGTGCCACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TPFLRSPKAQWA*YCLSRLFVPLP Trigger: TGGCAGTGGCACGAATAAGCGGGACAAGCAATACCAGGCCCACTGGGCCTTCGGGGACCGCAGGAATGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000334029.6 ENST00000357068.11 ENST00000420436.5 ENST00000438924.5 ENST00000450579.1 ENST00000457083.1 ENST00000482858.5 ENST00000491604.5 ENST00000496625.1 ENST00000610940.4 |
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| CDS CCA 72 bp | ACACAGCCCCTGTGGCCAGCTCAGGCCTCTAAGGCATaGGCACCTGTGTTTTTGGTGGATGCCCACAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TQPLWPAQASKA*APVFLVDAHSC Trigger: GCAGCTGTGGGCATCCACCAAAAACACAGGTGCCCATGCCTTAGAGGCCTGAGCTGGCCACAGGGGCTGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000429300.5 ENST00000482858.5 |
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| CDS CAA 72 bp | ATTCCTGCGGTCCCCGAAGGCCCAGTGGGCCTGGTATaGCTTGTCCCGCTTATTCGTGCCACTGCCATCCCT | + |
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Preference number: 6 (lower is better) Translates to: IPAVPEGPVGLV*LVPLIRATAIP Trigger: AGGGATGGCAGTGGCACGAATAAGCGGGACAAGCAATACCAGGCCCACTGGGCCTTCGGGGACCGCAGGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000334029.6 ENST00000357068.11 ENST00000420436.5 ENST00000438924.5 ENST00000450579.1 ENST00000457083.1 ENST00000482858.5 ENST00000491604.5 ENST00000496625.1 ENST00000610940.4 |
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| CDS TCA 72 bp | CGTGAGGCACTTTGGCCAGCAGGGAGGTACCAAAGGTaGCACAAGCAGAGGCTTGCCCTCTCCAGGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: REALWPAGRYQR*HKQRLALSRPS Trigger: AGAAGGCCTGGAGAGGGCAAGCCTCTGCTTGTGTCACCTTTGGTACCTCCCTGCTGGCCAAAGTGCCTCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609229.1 |
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| CDS CCA 72 bp | CAGGTGACACTGGCCCTTAGAGCCCAGCTGCCATGTTaGGAAAAAGCCCAAGCCACAGCCAGCACCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: QVTLALRAQLPC*EKAQATASTNS Trigger: GGAGTTGGTGCTGGCTGTGGCTTGGGCTTTTTCCCAACATGGCAGCTGGGCTCTAAGGGCCAGTGTCACCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000313755.9 ENST00000482858.5 ENST00000609229.1 |
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| CDS CCA 72 bp | CTGATGACACCATTCCTGCGGTCCCCGAAGGCCCAGTaGGCCTGGTATTGCTTGTCCCGCTTATTCGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LMTPFLRSPKAQ*AWYCLSRLFVP Trigger: TGGCACGAATAAGCGGGACAAGCAATACCAGGCCCACTGGGCCTTCGGGGACCGCAGGAATGGTGTCATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000334029.6 ENST00000357068.11 ENST00000420436.5 ENST00000438924.5 ENST00000450579.1 ENST00000457083.1 ENST00000482858.5 ENST00000491604.5 ENST00000496625.1 ENST00000610940.4 |
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| CDS CCA 72 bp | CCCTGTCAACCCCAGAACCATGAGGCAGAAGCAGAGTaGCTGCTGCCGTTTCAGGCCTCTGAAGTTTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: PCQPQNHEAEAE*LLPFQASEVWG Trigger: ACCCCAAACTTCAGAGGCCTGAAACGGCAGCAGCCACTCTGCTTCTGCCTCATGGTTCTGGGGTTGACAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000313755.9 ENST00000482858.5 ENST00000609229.1 |
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| CDS GCA 72 bp | GATCTTACCATCTCATCTTGTTTCACGCCACCCCAATaGAGGGCCTTCCCCTTCCACCTGCCCTGGGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: DLTISSCFTPPQ*RAFPFHLPWEN Trigger: GTTCTCCCAGGGCAGGTGGAAGGGGAAGGCCCTGCATTGGGGTGGCGTGAAACAAGATGAGATGGTAAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429300.5 |
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| CDS GCA 72 bp | CACAGCTGCCCTGAGATCTCGCACAGCACCAGACTCTaGAGGTGGAAGGTTCTAGCACTTACCAGAAACTGG | + |
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Preference number: 6 (lower is better) Translates to: HSCPEISHSTRL*RWKVLALTRNW Trigger: CCAGTTTCTGGTAAGTGCTAGAACCTTCCACCTGCAGAGTCTGGTGCTGTGCGAGATCTCAGGGCAGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429300.5 ENST00000482858.5 |
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| CDS CCA 72 bp | TGCCCTGAGATCTCGCACAGCACCAGACTCTGCAGGTaGAAGGTTCTAGCACTTACCAGAAACTGGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: CPEISHSTRLCR*KVLALTRNWGL Trigger: GAGACCCCAGTTTCTGGTAAGTGCTAGAACCTTCCACCTGCAGAGTCTGGTGCTGTGCGAGATCTCAGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429300.5 ENST00000482858.5 |
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| CDS CAA 90 bp | CCCACCCCTGGCCTACAGAACATGCCACTGTTCCAGCCTCTAAGTTaGGGGCTGGTTTGTTCCTTGGCCAAAGCCAACTCCGATTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: PTPGLQNMPLFQPLS*GLVCSLAKANSDCL Trigger: CAAACAATCGGAGTTGGCTTTGGCCAAGGAACAAACCAGCCCCAAACTTAGAGGCTGGAACAGTGGCATGTTCTGTAGGCCAGGGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609229.1 |
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| CDS CAA 72 bp | GGCCTACAGAACATGCCACTGTTCCAGCCTCTAAGTTaGGGGCTGGTTTGTTCCTTGGCCAAAGCCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: GLQNMPLFQPLS*GLVCSLAKANS Trigger: GGAGTTGGCTTTGGCCAAGGAACAAACCAGCCCCAAACTTAGAGGCTGGAACAGTGGCATGTTCTGTAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609229.1 |
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| CDS TCA 72 bp | AAACAGAACTTGCCAGAAAAGACACCGTGTGACTTCTaGGGCGAGGCAGGAAAAGGTCACCCAGCTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: KQNLPEKTPCDF*GEAGKGHPASA Trigger: GGCAGAAGCTGGGTGACCTTTTCCTGCCTCGCCTCAGAAGTCACACGGTGTCTTTTCTGGCAAGTTCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000313755.9 ENST00000482858.5 ENST00000609229.1 |
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| CDS GCA 72 bp | GGCTGGCCTGGTGACATGCTTCTAACAAACAGAACTTaGCAGAAAAGACACCGTGTGACTTCTGAGGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: GWPGDMLLTNRT*QKRHRVTSEAR Trigger: CCTCGCCTCAGAAGTCACACGGTGTCTTTTCTGGCAAGTTCTGTTTGTTAGAAGCATGTCACCAGGCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000313755.9 ENST00000482858.5 ENST00000609229.1 |
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| CDS GCA 72 bp | GGTTCTAGCACTTACCAGAAACTGGGGTCTCCCCAGTaGTGTGAGCTTAATGGCTATGAAGCCGTCATCGCT | + |
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Preference number: 6 (lower is better) Translates to: GSSTYQKLGSPQ*CELNGYEAVIA Trigger: AGCGATGACGGCTTCATAGCCATTAAGCTCACAGCACTGGGGAGACCCCAGTTTCTGGTAAGTGCTAGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429300.5 ENST00000482858.5 |
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| CDS CCA 72 bp | CTCTGCAGGTGGAAGGTTCTAGCACTTACCAGAAACTaGGGTCTCCCCAGTGCTGTGAGCTTAATGGCTATG | + |
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Preference number: 6 (lower is better) Translates to: LCRWKVLALTRN*GLPSAVSLMAM Trigger: CATAGCCATTAAGCTCACAGCACTGGGGAGACCCCAGTTTCTGGTAAGTGCTAGAACCTTCCACCTGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429300.5 ENST00000482858.5 |
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| CDS TCA 72 bp | CTCATTCCTCTCCCCGCTGTATACAGGCTGGCCTGGTaGCATGCTTCTAACAAACAGAACTTGCCAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LIPLPAVYRLAW*HASNKQNLPEK Trigger: CTTTTCTGGCAAGTTCTGTTTGTTAGAAGCATGTCACCAGGCCAGCCTGTATACAGCGGGGAGAGGAATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000313755.9 ENST00000482858.5 ENST00000609229.1 |
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