RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRNP (Homo sapiens)

Ensembl gene IDs: ENSG00000171867

Ensembl transcript IDs: ENST00000379440.9, ENST00000424424.2, ENST00000430350.2, ENST00000457586.2

Found 254 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAGGGGGCTTGACCAGCATCTCAGGTCTACTCTATGTTTTCCAGTaGCCATCAGTGCCAAGGGTATTGATTAGCCTATCCGGGACAAAG +
Preference number: 1 (lower is better)
Translates to: KGGLTSISGLLYVFQ*PSVPRVLISLSGTK
Trigger: CTTTGTCCCGGATAGGCTAATCAATACCCTTGGCACTGATGGGCACTGGAAAACATAGAGTAGACCTGAGATGCTGGTCAAGCCCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR CCA 90 bp ATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAAATCATTCTaGTTTCCAGGTAAATGGACAAAGGAGATTTGCCTTCAGTGTCTA +
Preference number: 1 (lower is better)
Translates to: MVLSQLQLSCMSKSF*FPGKWTKEICLQCL
Trigger: TAGACACTGAAGGCAAATCTCCTTTGTCCATTTACCTGGAAACCAGAATGATTTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR CCA 90 bp CTGCAGCTCTCCTGTATGTCAAAATCATTCTGGTTTCCAGGTAAATaGACAAAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTT +
Preference number: 1 (lower is better)
Translates to: LQLSCMSKSFWFPGK*TKEICLQCLEGNLL
Trigger: AAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTTTGTCCATTTACCTGGAAACCAGAATGATTTTGACATACAGGAGAGCTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR CCA 90 bp TTAAAGAAAGGAATGCCACATATAGGGTCCTTTAAACATCTAAAATaGGAGGTTGCCTCCAAGGGCACCATTCCCAAACATTTGATTTCA +
Preference number: 1 (lower is better)
Translates to: LKKGMPHIGSFKHLK*EVASKGTIPKHLIS
Trigger: TGAAATCAAATGTTTGGGAATGGTGCCCTTGGAGGCAACCTCCCATTTTAGATGTTTAAAGGACCCTATATGTGGCATTCCTTTCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR GCA 90 bp AAGGTATTTCAGACTGTTCTGAGATTTGTTTTAGCCTCAACCTGTTaGACTAAGTCCAAAAATAAGTCCAGATTAACCAATGGTTATTTG +
Preference number: 1 (lower is better)
Translates to: KVFQTVLRFVLASTC*TKSKNKSRLTNGYL
Trigger: CAAATAACCATTGGTTAATCTGGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAACAGTCTGAAATACCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR TCA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATCATGCTCCAGCGGGCTaGGCCTGCATCCCAAGAGCT +
Preference number: 2 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNHAPAG*ACIPRA
Trigger: AGCTCTTGGGATGCAGGCTCAGCCCGCTGGAGCATG...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR TCA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAACAGTGCCAAGGGTATTaGTTAGCCTATCCGGGACAA +
Preference number: 2 (lower is better)
Translates to: IILYDDGAFTTAALLYVKQCQGY*LAYPGQ
Trigger: TTGTCCCGGATAGGCTAATCAATACCCTTGGCACTG...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR TCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACCAATCAAAGGGGGCTTaGCCAGCATCTCAGGTCTAC +
Preference number: 2 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDQSKGA*PASQVY
Trigger: GTAGACCTGAGATGCTGGTCAAGCCCCCTTTGATTG...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR TCA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATCAATCAAAGGGGGCTTaGCCAGCATCTCAGGTCTAC +
Preference number: 2 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNQSKGA*PASQVY
Trigger: GTAGACCTGAGATGCTGGTCAAGCCCCCTTTGATTG...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR TCA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAAAGGGCATTAGTATACTaGGCTCTAGCTGCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: IILYDDGAFTTAALLYVKRALVY*ALAAEG
Trigger: TCCTTCAGCAGCTAGAGCTCAGTATACTAATGCCCT...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR GCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACCTCTTGTTGAACAGCTaGTGTGTAGCCCATACTGTG +
Preference number: 2 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDLLLNS*CVAHTV
Trigger: CACAGTATGGGCTACACAGCAGCTGTTCAACAAGAG...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR GCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCTCTAAAATGGGAGGTTaGCTCCAAGGGCACCATTCC +
Preference number: 2 (lower is better)
Translates to: SAALITYSLKKGMPHIGSSKMGG*LQGHHS
Trigger: GGAATGGTGCCCTTGGAGGCAACCTCCCATTTTAGA...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR TCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACAGAGAGAAGAAAGAGTaGGACACCACCACTAAAAGG +
Preference number: 2 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDREKKE*DTTTKR
Trigger: CCTTTTAGTGGTGGTGTCTCACTCTTTCTTCTCTCT...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR TCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATAGAGAGAAGAAAGAGTaGGACACCACCACTAAAAGG +
Preference number: 2 (lower is better)
Translates to: MVICCYTFTGLALATAHDREKKE*DTTTKR
Trigger: CCTTTTAGTGGTGGTGTCTCACTCTTTCTTCTCTCT...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR TCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCCAATCAAAGGGGGCTTaGCCAGCATCTCAGGTCTAC +
Preference number: 2 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFQSKGA*PASQVY
Trigger: GTAGACCTGAGATGCTGGTCAAGCCCCCTTTGATTG...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR TCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCAGGGCATTAGTATACTaGGCTCTAGCTGCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: SAALITYSLKKGMPHIGSRALVY*ALAAEG
Trigger: TCCTTCAGCAGCTAGAGCTCAGTATACTAATGCCCT...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR TCA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAACAGTTATGTTCACTGTaGATATGTCCTCTAGCCAGA +
Preference number: 2 (lower is better)
Translates to: IILYDDGAFTTAALLYVKQLCSL*ICPLAR
Trigger: TCTGGCTAGAGGACATATTCACAGTGAACATAACTG...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR GCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCCTCTATGTTTTCCAGTaGCCATCAGTGCCAAGGGTA +
Preference number: 2 (lower is better)
Translates to: SAALITYSLKKGMPHIGSLYVFQ*PSVPRV
Trigger: TACCCTTGGCACTGATGGGCACTGGAAAACATAGAG...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR GCA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATCTCTATGTTTTCCAGTaGCCATCAGTGCCAAGGGTA +
Preference number: 2 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNLYVFQ*PSVPRV
Trigger: TACCCTTGGCACTGATGGGCACTGGAAAACATAGAG...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR GCA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATCTCTTGTTGAACAGCTaGTGTGTAGCCCATACTGTG +
Preference number: 2 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNLLLNS*CVAHTV
Trigger: CACAGTATGGGCTACACAGCAGCTGTTCAACAAGAG...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR CCA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAATTTAAACATCTAAAATaGGAGGTTGCCTCCAAGGGC +
Preference number: 2 (lower is better)
Translates to: IILYDDGAFTTAALLYVKFKHLK*EVASKG
Trigger: GCCCTTGGAGGCAACCTCCCATTTTAGATGTTTAAA...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR CAA 90 bp CATCTAAAATGGGAGGTTGCCTCCAAGGGCACCATTCCCAAACATTaGATTTCAAGTCCCAGAAGCCTTTCATATATGTTACAGTTATGT +
Preference number: 2 (lower is better)
Translates to: HLKWEVASKGTIPKH*ISSPRSLSYMLQLC
Trigger: ACATAACTGTAACATATATGAAAGGCTTCTGGGACTTGAAATCAAATGTTTGGGAATGGTGCCCTTGGAGGCAACCTCCCATTTTAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR TCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCAGAGAGAAGAAAGAGTaGGACACCACCACTAAAAGG +
Preference number: 2 (lower is better)
Translates to: SAALITYSLKKGMPHIGSREKKE*DTTTKR
Trigger: CCTTTTAGTGGTGGTGTCTCACTCTTTCTTCTCTCT...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR CCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCCTGTTATACTTTTACTaGCCTGGCATTAGCAACGGC +
Preference number: 2 (lower is better)
Translates to: SAALITYSLKKGMPHIGSLLYFY*PGISNG
Trigger: GCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAG...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR TCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCAGAGAGAAGAAAGAGTaGGACACCACCACTAAAAGG +
Preference number: 2 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFREKKE*DTTTKR
Trigger: CCTTTTAGTGGTGGTGTCTCACTCTTTCTTCTCTCT...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR GCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCTGGTGCTTTCACAACTaGAGCTCTCCTGTATGTCAA +
Preference number: 2 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFWCFHN*SSPVCQ
Trigger: TTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCA...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR CCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCCTGTTATACTTTTACTaGCCTGGCATTAGCAACGGC +
Preference number: 2 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFLLYFY*PGISNG
Trigger: GCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAG...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR GCA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATTTAGCCTCAACCTGTTaGACTAAGTCCAAAAATAAG +
Preference number: 2 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNLASTC*TKSKNK
Trigger: CTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAA...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR CAA 90 bp TATAAAGTACATGCATATTTCAAAGACCTGTTAATGGTGTCCACTTaGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAG +
Preference number: 2 (lower is better)
Translates to: YKVHAYFKDLLMVST*DSYMKRFSAHCKPK
Trigger: CTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATATGCATGTACTTTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR TCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCTGTCTCCCTATTCTTTaGTTCAAAAGCCAATTACAG +
Preference number: 2 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFCLPIL*FKSQLQ
Trigger: CTGTAATTGGCTTTTGAATCAAAGAATAGGGAGACA...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR GCA 72 bp TTGACCAGCATCTCAGGTCTACTCTATGTTTTCCAGTaGCCATCAGTGCCAAGGGTATTGATTAGCCTATCC +
Preference number: 3 (lower is better)
Translates to: LTSISGLLYVFQ*PSVPRVLISLS
Trigger: GGATAGGCTAATCAATACCCTTGGCACTGATGGGCACTGGAAAACATAGAGTAGACCTGAGATGCTGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR CAA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATTCAGTGCCAAGGGTATaGATTAGCCTATCCGGGACA +
Preference number: 3 (lower is better)
Translates to: MVICCYTFTGLALATAHDSVPRV*ISLSGT
Trigger: TGTCCCGGATAGGCTAATCAATACCCTTGGCACTGA...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR CAA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCTCAATCAAAGGGGGCTaGACCAGCATCTCAGGTCTA +
Preference number: 3 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSSIKGG*TSISGL
Trigger: TAGACCTGAGATGCTGGTCAAGCCCCCTTTGATTGA...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR CAA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACATGGACAAAGGAGATTaGCCTTCAGTGTCTAGAAGG +
Preference number: 3 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDMDKGD*PSVSRR
Trigger: CCTTCTAGACACTGAAGGCAAATCTCCTTTGTCCAT...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR CCA 72 bp TCCTGTATGTCAAAATCATTCTGGTTTCCAGGTAAATaGACAAAGGAGATTTGCCTTCAGTGTCTAGAAGGC +
Preference number: 3 (lower is better)
Translates to: SCMSKSFWFPGK*TKEICLQCLEG
Trigger: GCCTTCTAGACACTGAAGGCAAATCTCCTTTGTCCATTTACCTGGAAACCAGAATGATTTTGACATACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR CCA 72 bp TCACAACTGCAGCTCTCCTGTATGTCAAAATCATTCTaGTTTCCAGGTAAATGGACAAAGGAGATTTGCCTT +
Preference number: 3 (lower is better)
Translates to: SQLQLSCMSKSF*FPGKWTKEICL
Trigger: AAGGCAAATCTCCTTTGTCCATTTACCTGGAAACCAGAATGATTTTGACATACAGGAGAGCTGCAGTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR CAA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCTCAATCAAAGGGGGCTaGACCAGCATCTCAGGTCTA +
Preference number: 3 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFSIKGG*TSISGL
Trigger: TAGACCTGAGATGCTGGTCAAGCCCCCTTTGATTGA...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR CAA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATACCATTCCCAAACATTaGATTTCAAGTCCCAGAAGC +
Preference number: 3 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNTIPKH*ISSPRS
Trigger: GCTTCTGGGACTTGAAATCAAATGTTTGGGAATGGT...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR CAA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCATGGACAAAGGAGATTaGCCTTCAGTGTCTAGAAGG +
Preference number: 3 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFMDKGD*PSVSRR
Trigger: CCTTCTAGACACTGAAGGCAAATCTCCTTTGTCCAT...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR GCA 72 bp CAGACTGTTCTGAGATTTGTTTTAGCCTCAACCTGTTaGACTAAGTCCAAAAATAAGTCCAGATTAACCAAT +
Preference number: 3 (lower is better)
Translates to: QTVLRFVLASTC*TKSKNKSRLTN
Trigger: ATTGGTTAATCTGGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAACAGTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR-3UTR CAA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCAACCTGGCAGAAATGTaGTCGGGTTTTCTTAAAATG +
Preference number: 3 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFNLAEM*SGFLKM
Trigger: CATTTTAAGAAAACCCGACAACATTTCTGCCAGGTT...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGCCTCCAGGGCTGCCCTaGCCCGGGTATCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWPPGLP*PGYRLP
Trigger: GGGCAGCCGATACCCGGGGCAGGGCAGCCCTGGAGG...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGCCCCGGGTATCGGCTaGCCCCAGTGTTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKAPGIG*PQCSIL
Trigger: GAGGATGGAACACTGGGGGCAGCCGATACCCGGGGC...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGGAGGTGGGTAGCGGTTaGCTCCAGGGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWEVGSG*LQGCPA
Trigger: GGCAGGGCAGCCCTGGAGGCAACCGCTACCCACCTC...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGCTCGGCTTGTTCCACTaGCTGTGGGTGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMLGLFH*LWVPPP
Trigger: AGGAGGTGGCACCCACAGTCAGTGGAACAAGCCGAG...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAACACTGCCGAAATGTATaGTGGGCCTGCTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKHCRNV*WACSWH
Trigger: GTGCCATGAGCAGGCCCATCATACATTTCGGCAGTG...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAACAATCAAAGGGGGCTTaGCCAGCATCTCAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKQSKGA*PASQVY
Trigger: GTAGACCTGAGATGCTGGTCAAGCCCCCTTTGATTG...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAAGAGGTGGGTAGCGGTTaGCTCCAGGGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: IILYDDGAFTTAALLYVKEVGSG*LQGCPA
Trigger: GGCAGGGCAGCCCTGGAGGCAACCGCTACCCACCTC...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAACCAGGTCACTCCATGTaGCCACAAAGAGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKPGHSM*PQREPA
Trigger: TGCTGGTTCTCTTTGTGGCCACATGGAGTGACCTGG...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGCACTGCCGAAATGTATaGTGGGCCTGCTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMHCRNV*WACSWH
Trigger: GTGCCATGAGCAGGCCCATCATACATTTCGGCAGTG...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGCCCTCTCGTACTGGGTaGTACACATCTGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWPSRTG*YTSAQP
Trigger: TGGTTGAGCAGATGTGTATCACCCAGTACGAGAGGG...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATGAGGTGGGTAGCGGTTaGCTCCAGGGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDEVGSG*LQGCPA
Trigger: GGCAGGGCAGCCCTGGAGGCAACCGCTACCCACCTC...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGTGGGTGATACACATCTaGTCAACCACGCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWWVIHI*STTRSI
Trigger: GATGGAGCGCGTGGTTGAGCAGATGTGTATCACCCA...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAACCACTATCAGGAAGATaGGGAAAGAGATCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKPLSGR*GKRSGG
Trigger: TCCTCCTGATCTCTTTCCTCATCTTCCTGATAGTGG...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGCAATCAAAGGGGGCTTaGCCAGCATCTCAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMQSKGA*PASQVY
Trigger: GTAGACCTGAGATGCTGGTCAAGCCCCCTTTGATTG...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAAGGGCATTAGTATACTaGGCTCTAGCTGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKRALVY*ALAAEG
Trigger: TCCTTCAGCAGCTAGAGCTCAGTATACTAATGCCCT...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAACATGCTCCAGCGGGCTaGGCCTGCATCCCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: IILYDDGAFTTAALLYVKHAPAG*ACIPRA
Trigger: AGCTCTTGGGATGCAGGCTCAGCCCGCTGGAGCATG...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATGCCCCGGGTATCGGCTaGCCCCAGTGTTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDAPGIG*PQCSIL
Trigger: GAGGATGGAACACTGGGGGCAGCCGATACCCGGGGC...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACGCCCCGGGTATCGGCTaGCCCCAGTGTTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDAPGIG*PQCSIL
Trigger: GAGGATGGAACACTGGGGGCAGCCGATACCCGGGGC...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCGAGGTGGGTAGCGGTTaGCTCCAGGGCTGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSEVGSG*LQGCPA
Trigger: GGCAGGGCAGCCCTGGAGGCAACCGCTACCCACCTC...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGGCAGCACCAGCCATGTaGTTCATGTTGGTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWAAPAM*FMLVFG
Trigger: GCCAAAAACCAACATGAAGCACATGGCTGGTGCTGC...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAACTCTATGTTTTCCAGTaGCCATCAGTGCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKLYVFQ*PSVPRV
Trigger: TACCCTTGGCACTGATGGGCACTGGAAAACATAGAG...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACACCACCGCCCTGAGGTaGGTAGCGGTTGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDTTALR*VAVASR
Trigger: CCTGGAGGCAACCGCTACCCACCTCAGGGCGGTGGT...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAATGCTGTACTCATCCATaGGCCTGTAGTACACTTGGT +
Preference number: 4 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKCCTHP*ACSTLG
Trigger: ACCAAGTGTACTACAGGCCCATGGATGAGTACAGCA...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACCATGCTCCAGCGGGCTaGGCCTGCATCCCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDHAPAG*ACIPRA
Trigger: AGCTCTTGGGATGCAGGCTCAGCCCGCTGGAGCATG...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGGTGGTGACCGTGTGCTaGTTGATTGTGATATTGACG +
Preference number: 4 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWVVTVC*LIVILT
Trigger: CGTCAATATCACAATCAAGCAGCACACGGTCACCAC...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGCTCTATGTTTTCCAGTaGCCATCAGTGCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWLYVFQ*PSVPRV
Trigger: TACCCTTGGCACTGATGGGCACTGGAAAACATAGAG...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGTCTAAAATGGGAGGTTaGCTCCAAGGGCACCATTCC +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMSKMGG*LQGHHS
Trigger: GGAATGGTGCCCTTGGAGGCAACCTCCCATTTTAGA...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAACTGTTATACTTTTACTaGCCTGGCATTAGCAACGGC +
Preference number: 4 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKLLYFY*PGISNG
Trigger: GCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAG...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATCTCGGCTTGTTCCACTaGCTGTGGGTGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDLGLFH*LWVPPP
Trigger: AGGAGGTGGCACCCACAGTCAGTGGAACAAGCCGAG...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACCTCGGCTTGTTCCACTaGCTGTGGGTGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDLGLFH*LWVPPP
Trigger: AGGAGGTGGCACCCACAGTCAGTGGAACAAGCCGAG...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGAGAGAGAAGAAAGAGTaGGACACCACCACTAAAAGG +
Preference number: 4 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWREKKE*DTTTKR
Trigger: CCTTTTAGTGGTGGTGTCTCACTCTTTCTTCTCTCT...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGAGGGCATTAGTATACTaGGCTCTAGCTGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMRALVY*ALAAEG
Trigger: TCCTTCAGCAGCTAGAGCTCAGTATACTAATGCCCT...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCCATGCTCCAGCGGGCTaGGCCTGCATCCCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SAALITYSLKKGMPHIGSHAPAG*ACIPRA
Trigger: AGCTCTTGGGATGCAGGCTCAGCCCGCTGGAGCATG...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAACAGTTATGTTCACTGTaGATATGTCCTCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKQLCSL*ICPLAR
Trigger: TCTGGCTAGAGGACATATTCACAGTGAACATAACTG...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGCAAAGTTGTTCTGGTTaGTGTACTCATCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMQSCSG*CTHPWA
Trigger: GGCCCATGGATGAGTACAGCAACCAGAACAACTTTG...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGTGGTGACCGTGTGCTaGTTGATTGTGATATTGACG +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMVVTVC*LIVILT
Trigger: CGTCAATATCACAATCAAGCAGCACACGGTCACCAC...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGAGGAGAAGAGGACCATaGTCGATCCTCTCTGGTAAT +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMRRRGP*SILSGN
Trigger: ATTACCAGAGAGGATCGAGCATGGTCCTCTTCTCCT...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGCTCTATGTTTTCCAGTaGCCATCAGTGCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMLYVFQ*PSVPRV
Trigger: TACCCTTGGCACTGATGGGCACTGGAAAACATAGAG...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGTGGACAAAGGAGATTTaGCTTCAGTGTCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWWTKEI*LQCLEG
Trigger: GCCTTCTAGACACTGAAGGCAAATCTCCTTTGTCCA...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGATTCCCTCTCGTACTaGGTGATACACATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMDSLSY*VIHICS
Trigger: TGAGCAGATGTGTATCACCCAGTACGAGAGGGAATC...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAATTTAAACATCTAAAATaGGAGGTTGCCTCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKFKHLK*EVASKG
Trigger: GCCCTTGGAGGCAACCTCCCATTTTAGATGTTTAAA...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCGCGGCTGTCAGCGACTaGCTCGGAGGACAGGCGACG +
Preference number: 4 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFAAVSD*LGGQAT
Trigger: CGTCGCCTGTCCTCCGAGCCAGTCGCTGACAGCCGC...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430350.2
CDS-3UTR TCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCGCTCTGCCTCGGTCGTaGGGAGAGGAGAAGCTCGCG +
Preference number: 4 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFALPRS*GEEKLA
Trigger: CGCGAGCTTCTCCTCTCCTCACGACCGAGGCAGAGC...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379440.9
CDS-3UTR TCA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAACACTGCCGAAATGTATaGTGGGCCTGCTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: IILYDDGAFTTAALLYVKHCRNV*WACSWH
Trigger: GTGCCATGAGCAGGCCCATCATACATTTCGGCAGTG...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGCAGTTATGTTCACTGTaGATATGTCCTCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWQLCSL*ICPLAR
Trigger: TCTGGCTAGAGGACATATTCACAGTGAACATAACTG...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCGCCCCGGGTATCGGCTaGCCCCAGTGTTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFAPGIG*PQCSIL
Trigger: GAGGATGGAACACTGGGGGCAGCCGATACCCGGGGC...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGTTGTGGTGACCGTGTaGTGCTTGATTGTGATATTG +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMVVVTV*CLIVIL
Trigger: CAATATCACAATCAAGCAGCACACGGTCACCACAAC...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGTGGACAAAGGAGATTTaGCTTCAGTGTCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMWTKEI*LQCLEG
Trigger: GCCTTCTAGACACTGAAGGCAAATCTCCTTTGTCCA...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGTGGTGCTTTCACAACTaGAGCTCTCCTGTATGTCAA +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMWCFHN*SSPVCQ
Trigger: TTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCA...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGCCATGTGCTTCATGTTaGTTTTTGGCTTACTCGGCT +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMPCASC*FLAYSA
Trigger: AGCCGAGTAAGCCAAAAACCAACATGAAGCACATGG...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGTGCACAAAGTTGTTCTaGTTGCTGTACTCATCCATG +
Preference number: 4 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWCTKLF*LLYSSM
Trigger: CATGGATGAGTACAGCAACCAGAACAACTTTGTGCA...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATCACTGCCGAAATGTATaGTGGGCCTGCTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDHCRNV*WACSWH
Trigger: GTGCCATGAGCAGGCCCATCATACATTTCGGCAGTG...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAACCCTCTCGTACTGGGTaGTACACATCTGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: IILYDDGAFTTAALLYVKPSRTG*YTSAQP
Trigger: TGGTTGAGCAGATGTGTATCACCCAGTACGAGAGGG...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCCATGCTCCAGCGGGCTaGGCCTGCATCCCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFHAPAG*ACIPRA
Trigger: AGCTCTTGGGATGCAGGCTCAGCCCGCTGGAGCATG...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGCAGTTATGTTCACTGTaGATATGTCCTCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMQLCSL*ICPLAR
Trigger: TCTGGCTAGAGGACATATTCACAGTGAACATAACTG...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAACTTTGGATTCTTACATaGAACGATTCAGTGCACATT +
Preference number: 4 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKLWILT*NDSVHI
Trigger: AATGTGCACTGAATCGTTTCATGTAAGAATCCAAAG...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGATATTGACGCAGTCGTaGACAAAGTTGTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMILTQS*TKLFWL
Trigger: CAACCAGAACAACTTTGTGCACGACTGCGTCAATAT...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGTGTAGTACACTTGGTTaGGGTAACGGTGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMCSTLG*GNGACF
Trigger: AAAACATGCACCGTTACCCCAACCAAGTGTACTACA...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGTTTAAACATCTAAAATaGGAGGTTGCCTCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMFKHLK*EVASKG
Trigger: GCCCTTGGAGGCAACCTCCCATTTTAGATGTTTAAA...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGTGGTTTCCAGGTAAATaGACAAAGGAGATTTGCCTT +
Preference number: 4 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWWFPGK*TKEICL
Trigger: AAGGCAAATCTCCTTTGTCCATTTACCTGGAAACCA...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCCTCGGCTTGTTCCACTaGCTGTGGGTGCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFLGLFH*LWVPPP
Trigger: AGGAGGTGGCACCCACAGTCAGTGGAACAAGCCGAG...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATCCCTCTCGTACTGGGTaGTACACATCTGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDPSRTG*YTSAQP
Trigger: TGGTTGAGCAGATGTGTATCACCCAGTACGAGAGGG...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACTGGGTGATACACATCTaGTCAACCACGCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDWVIHI*STTRSI
Trigger: GATGGAGCGCGTGGTTGAGCAGATGTGTATCACCCA...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGTTAGCCTCAACCTGTTaGACTAAGTCCAAAAATAAG +
Preference number: 4 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWLASTC*TKSKNK
Trigger: CTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAA...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATCCAGGTCACTCCATGTaGCCACAAAGAGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDPGHSM*PQREPA
Trigger: TGCTGGTTCTCTTTGTGGCCACATGGAGTGACCTGG...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCCCCTCTCGTACTGGGTaGTACACATCTGCTCAACCA +
Preference number: 4 (lower is better)
Translates to: SAALITYSLKKGMPHIGSPSRTG*YTSAQP
Trigger: TGGTTGAGCAGATGTGTATCACCCAGTACGAGAGGG...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAACCACTATCAGGAAGATaGGGAAAGAGATCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: IILYDDGAFTTAALLYVKPLSGR*GKRSGG
Trigger: TCCTCCTGATCTCTTTCCTCATCTTCCTGATAGTGG...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGTGTCTCCCTATTCTTTaGTTCAAAAGCCAATTACAG +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMCLPIL*FKSQLQ
Trigger: CTGTAATTGGCTTTTGAATCAAAGAATAGGGAGACA...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGCTTTGGATTCTTACATaGAACGATTCAGTGCACATT +
Preference number: 4 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMLWILT*NDSVHI
Trigger: AATGTGCACTGAATCGTTTCATGTAAGAATCCAAAG...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACGCAGCACCAGCCATGTaGTTCATGTTGGTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDAAPAM*FMLVFG
Trigger: GCCAAAAACCAACATGAAGCACATGGCTGGTGCTGC...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAACAAAGTTGTTCTGGTTaGTGTACTCATCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: IILYDDGAFTTAALLYVKQSCSG*CTHPWA
Trigger: GGCCCATGGATGAGTACAGCAACCAGAACAACTTTG...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCTGGGTGATACACATCTaGTCAACCACGCGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SAALITYSLKKGMPHIGSWVIHI*STTRSI
Trigger: GATGGAGCGCGTGGTTGAGCAGATGTGTATCACCCA...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAACTCTTGTTGAACAGCTaGTGTGTAGCCCATACTGTG +
Preference number: 4 (lower is better)
Translates to: IILYDDGAFTTAALLYVKLLLNS*CVAHTV
Trigger: CACAGTATGGGCTACACAGCAGCTGTTCAACAAGAG...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATTCTAAAATGGGAGGTTaGCTCCAAGGGCACCATTCC +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDSKMGG*LQGHHS
Trigger: GGAATGGTGCCCTTGGAGGCAACCTCCCATTTTAGA...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACTCTAAAATGGGAGGTTaGCTCCAAGGGCACCATTCC +
Preference number: 4 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDSKMGG*LQGHHS
Trigger: GGAATGGTGCCCTTGGAGGCAACCTCCCATTTTAGA...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCCCAGGTCACTCCATGTaGCCACAAAGAGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: SAALITYSLKKGMPHIGSPGHSM*PQREPA
Trigger: TGCTGGTTCTCTTTGTGGCCACATGGAGTGACCTGG...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGATGTCAAAATCATTCTaGTTTCCAGGTAAATGGACA +
Preference number: 4 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWMSKSF*FPGKWT
Trigger: TGTCCATTTACCTGGAAACCAGAATGATTTTGACAT...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
3UTR CAA 72 bp TGGGAGGTTGCCTCCAAGGGCACCATTCCCAAACATTaGATTTCAAGTCCCAGAAGCCTTTCATATATGTTA +
Preference number: 4 (lower is better)
Translates to: WEVASKGTIPKH*ISSPRSLSYML
Trigger: TAACATATATGAAAGGCTTCTGGGACTTGAAATCAAATGTTTGGGAATGGTGCCCTTGGAGGCAACCTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATCAGTGCCAAGGGTATTaGTTAGCCTATCCGGGACAA +
Preference number: 4 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNQCQGY*LAYPGQ
Trigger: TTGTCCCGGATAGGCTAATCAATACCCTTGGCACTG...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATAGGGCATTAGTATACTaGGCTCTAGCTGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDRALVY*ALAAEG
Trigger: TCCTTCAGCAGCTAGAGCTCAGTATACTAATGCCCT...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATGCAGCACCAGCCATGTaGTTCATGTTGGTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNAAPAM*FMLVFG
Trigger: GCCAAAAACCAACATGAAGCACATGGCTGGTGCTGC...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCGCAGCACCAGCCATGTaGTTCATGTTGGTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: SAALITYSLKKGMPHIGSAAPAM*FMLVFG
Trigger: GCCAAAAACCAACATGAAGCACATGGCTGGTGCTGC...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATAGGAGAAGAGGACCATaGTCGATCCTCTCTGGTAAT +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDRRRGP*SILSGN
Trigger: ATTACCAGAGAGGATCGAGCATGGTCCTCTTCTCCT...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACCTCTATGTTTTCCAGTaGCCATCAGTGCCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDLYVFQ*PSVPRV
Trigger: TACCCTTGGCACTGATGGGCACTGGAAAACATAGAG...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATCTCTTGTTGAACAGCTaGTGTGTAGCCCATACTGTG +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDLLLNS*CVAHTV
Trigger: CACAGTATGGGCTACACAGCAGCTGTTCAACAAGAG...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACGATTCCCTCTCGTACTaGGTGATACACATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDDSLSY*VIHICS
Trigger: TGAGCAGATGTGTATCACCCAGTACGAGAGGGAATC...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATCCACTATCAGGAAGATaGGGAAAGAGATCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNPLSGR*GKRSGG
Trigger: TCCTCCTGATCTCTTTCCTCATCTTCCTGATAGTGG...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCAGGGCATTAGTATACTaGGCTCTAGCTGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSRALVY*ALAAEG
Trigger: TCCTTCAGCAGCTAGAGCTCAGTATACTAATGCCCT...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCCAAAGTTGTTCTGGTTaGTGTACTCATCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSQSCSG*CTHPWA
Trigger: GGCCCATGGATGAGTACAGCAACCAGAACAACTTTG...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCCAAAGTTGTTCTGGTTaGTGTACTCATCCATGGGCC +
Preference number: 4 (lower is better)
Translates to: SAALITYSLKKGMPHIGSQSCSG*CTHPWA
Trigger: GGCCCATGGATGAGTACAGCAACCAGAACAACTTTG...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATGTGGTGACCGTGTGCTaGTTGATTGTGATATTGACG +
Preference number: 4 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNVVTVC*LIVILT
Trigger: CGTCAATATCACAATCAAGCAGCACACGGTCACCAC...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCAGGAGAAGAGGACCATaGTCGATCCTCTCTGGTAAT +
Preference number: 4 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSRRRGP*SILSGN
Trigger: ATTACCAGAGAGGATCGAGCATGGTCCTCTTCTCCT...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCCTCTTGTTGAACAGCTaGTGTGTAGCCCATACTGTG +
Preference number: 4 (lower is better)
Translates to: SAALITYSLKKGMPHIGSLLLNS*CVAHTV
Trigger: CACAGTATGGGCTACACAGCAGCTGTTCAACAAGAG...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATTGGACAAAGGAGATTTaGCTTCAGTGTCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDWTKEI*LQCLEG
Trigger: GCCTTCTAGACACTGAAGGCAAATCTCCTTTGTCCA...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATTGGTGCTTTCACAACTaGAGCTCTCCTGTATGTCAA +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDWCFHN*SSPVCQ
Trigger: TTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCA...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACTGGTGCTTTCACAACTaGAGCTCTCCTGTATGTCAA +
Preference number: 4 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDWCFHN*SSPVCQ
Trigger: TTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCA...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCCCAGGTCACTCCATGTaGCCACAAAGAGAACCAGCA +
Preference number: 4 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFPGHSM*PQREPA
Trigger: TGCTGGTTCTCTTTGTGGCCACATGGAGTGACCTGG...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATCCATGTGCTTCATGTTaGTTTTTGGCTTACTCGGCT +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDPCASC*FLAYSA
Trigger: AGCCGAGTAAGCCAAAAACCAACATGAAGCACATGG...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAATGCACAAAGTTGTTCTaGTTGCTGTACTCATCCATG +
Preference number: 4 (lower is better)
Translates to: IILYDDGAFTTAALLYVKCTKLF*LLYSSM
Trigger: CATGGATGAGTACAGCAACCAGAACAACTTTGTGCA...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCGATTCCCTCTCGTACTaGGTGATACACATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSDSLSY*VIHICS
Trigger: TGAGCAGATGTGTATCACCCAGTACGAGAGGGAATC...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATGATTCCCTCTCGTACTaGGTGATACACATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNDSLSY*VIHICS
Trigger: TGAGCAGATGTGTATCACCCAGTACGAGAGGGAATC...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCAGAGAGAAGAAAGAGTaGGACACCACCACTAAAAGG +
Preference number: 4 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSREKKE*DTTTKR
Trigger: CCTTTTAGTGGTGGTGTCTCACTCTTTCTTCTCTCT...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATATATTGACGCAGTCGTaGACAAAGTTGTTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDILTQS*TKLFWL
Trigger: CAACCAGAACAACTTTGTGCACGACTGCGTCAATAT...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCGTTGTGGTGACCGTGTaGTGCTTGATTGTGATATTG +
Preference number: 4 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSVVVTV*CLIVIL
Trigger: CAATATCACAATCAAGCAGCACACGGTCACCACAAC...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATGTTGTGGTGACCGTGTaGTGCTTGATTGTGATATTG +
Preference number: 4 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNVVVTV*CLIVIL
Trigger: CAATATCACAATCAAGCAGCACACGGTCACCACAAC...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCTGGACAAAGGAGATTTaGCTTCAGTGTCTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SAALITYSLKKGMPHIGSWTKEI*LQCLEG
Trigger: GCCTTCTAGACACTGAAGGCAAATCTCCTTTGTCCA...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCGTTCGCCATAATGACTaGTCTGAAAAGCGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSVRHND*SEKRSQ
Trigger: TTGGCTTCGCTTTTCAGAGCAGTCATTATGGCGAAC...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000457586.2
CDS-3UTR CCA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCCCATGTGCTTCATGTTaGTTTTTGGCTTACTCGGCT +
Preference number: 4 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSPCASC*FLAYSA
Trigger: AGCCGAGTAAGCCAAAAACCAACATGAAGCACATGG...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACTGTAGTACACTTGGTTaGGGTAACGGTGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDCSTLG*GNGACF
Trigger: AAAACATGCACCGTTACCCCAACCAAGTGTACTACA...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACTGCACAAAGTTGTTCTaGTTGCTGTACTCATCCATG +
Preference number: 4 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDCTKLF*LLYSSM
Trigger: CATGGATGAGTACAGCAACCAGAACAACTTTGTGCA...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCCTGTTATACTTTTACTaGCCTGGCATTAGCAACGGC +
Preference number: 4 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSLLYFY*PGISNG
Trigger: GCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAG...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAATGGTTTCCAGGTAAATaGACAAAGGAGATTTGCCTT +
Preference number: 4 (lower is better)
Translates to: IILYDDGAFTTAALLYVKWFPGK*TKEICL
Trigger: AAGGCAAATCTCCTTTGTCCATTTACCTGGAAACCA...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCCAGTTATGTTCACTGTaGATATGTCCTCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SAALITYSLKKGMPHIGSQLCSL*ICPLAR
Trigger: TCTGGCTAGAGGACATATTCACAGTGAACATAACTG...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCCTCTTGTTGAACAGCTaGTGTGTAGCCCATACTGTG +
Preference number: 4 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFLLLNS*CVAHTV
Trigger: CACAGTATGGGCTACACAGCAGCTGTTCAACAAGAG...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCTGTAGTACACTTGGTTaGGGTAACGGTGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSCSTLG*GNGACF
Trigger: AAAACATGCACCGTTACCCCAACCAAGTGTACTACA...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCTGCTGTACTCATCCATaGGCCTGTAGTACACTTGGT +
Preference number: 4 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFCCTHP*ACSTLG
Trigger: ACCAAGTGTACTACAGGCCCATGGATGAGTACAGCA...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATTGGTTTCCAGGTAAATaGACAAAGGAGATTTGCCTT +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDWFPGK*TKEICL
Trigger: AAGGCAAATCTCCTTTGTCCATTTACCTGGAAACCA...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACCTTTGGATTCTTACATaGAACGATTCAGTGCACATT +
Preference number: 4 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDLWILT*NDSVHI
Trigger: AATGTGCACTGAATCGTTTCATGTAAGAATCCAAAG...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCGTTGTGGTGACCGTGTaGTGCTTGATTGTGATATTG +
Preference number: 4 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFVVVTV*CLIVIL
Trigger: CAATATCACAATCAAGCAGCACACGGTCACCACAAC...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATTTAGCCTCAACCTGTTaGACTAAGTCCAAAAATAAG +
Preference number: 4 (lower is better)
Translates to: MVICCYTFTGLALATAHDLASTC*TKSKNK
Trigger: CTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAA...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATTGGTTTCCAGGTAAATaGACAAAGGAGATTTGCCTT +
Preference number: 4 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNWFPGK*TKEICL
Trigger: AAGGCAAATCTCCTTTGTCCATTTACCTGGAAACCA...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAAATGTCAAAATCATTCTaGTTTCCAGGTAAATGGACA +
Preference number: 4 (lower is better)
Translates to: IILYDDGAFTTAALLYVKMSKSF*FPGKWT
Trigger: TGTCCATTTACCTGGAAACCAGAATGATTTTGACAT...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCTGTCTCCCTATTCTTTaGTTCAAAAGCCAATTACAG +
Preference number: 4 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSCLPIL*FKSQLQ
Trigger: CTGTAATTGGCTTTTGAATCAAAGAATAGGGAGACA...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR TCA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATCTTTGGATTCTTACATaGAACGATTCAGTGCACATT +
Preference number: 4 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNLWILT*NDSVHI
Trigger: AATGTGCACTGAATCGTTTCATGTAAGAATCCAAAG...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCTTAGCCTCAACCTGTTaGACTAAGTCCAAAAATAAG +
Preference number: 4 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSLASTC*TKSKNK
Trigger: CTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAA...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCTGTAGTACACTTGGTTaGGGTAACGGTGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFCSTLG*GNGACF
Trigger: AAAACATGCACCGTTACCCCAACCAAGTGTACTACA...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCTTTAAACATCTAAAATaGGAGGTTGCCTCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFFKHLK*EVASKG
Trigger: GCCCTTGGAGGCAACCTCCCATTTTAGATGTTTAAA...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCATGTCAAAATCATTCTaGTTTCCAGGTAAATGGACA +
Preference number: 4 (lower is better)
Translates to: SAALITYSLKKGMPHIGSMSKSF*FPGKWT
Trigger: TGTCCATTTACCTGGAAACCAGAATGATTTTGACAT...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CCA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCATGTCAAAATCATTCTaGTTTCCAGGTAAATGGACA +
Preference number: 4 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSMSKSF*FPGKWT
Trigger: TGTCCATTTACCTGGAAACCAGAATGATTTTGACAT...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR GCA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCTTAGCCTCAACCTGTTaGACTAAGTCCAAAAATAAG +
Preference number: 4 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFLASTC*TKSKNK
Trigger: CTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAA...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CCA 90 bp GTCGTGAGGAGAGGAGAAGCTCGCGGCGCCGCGGCTGTCAGCGACTaGCTCGGAGGACAGGCGACGCGCGGGGCCGAGGGGGAGGGACGC +
Preference number: 5 (lower is better)
Translates to: VVRRGEARGAAAVSD*LGGQATRGAEGEGR
Trigger: GCGTCCCTCCCCCTCGGCCCCGCGCGTCGCCTGTCCTCCGAGCCAGTCGCTGACAGCCGCGGCGCCGCGAGCTTCTCCTCTCCTCACGAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430350.2
CDS GCA 90 bp CCCAGCCACCACCGCCCTGAGGTGGGTAGCGGTTGCCTCCAGGGCTaGCCTGCCCCGGGTATCGGCTGCCCCCAGTGTTCCATCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PSHHRPEVGSGCLQG*PAPGIGCPQCSILQ
Trigger: CTGGAGGATGGAACACTGGGGGCAGCCGATACCCGGGGCAGGGCAGCCCTGGAGGCAACCGCTACCCACCTCAGGGCGGTGGTGGCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS GCA 90 bp GTGGGTAGCGGTTGCCTCCAGGGCTGCCCTGCCCCGGGTATCGGCTaGCCCCAGTGTTCCATCCTCCAGGCTTCGGGCGCTTCTTGCAGA +
Preference number: 5 (lower is better)
Translates to: VGSGCLQGCPAPGIG*PQCSILQASGASCR
Trigger: TCTGCAAGAAGCGCCCGAAGCCTGGAGGATGGAACACTGGGGGCAGCCGATACCCGGGGCAGGGCAGCCCTGGAGGCAACCGCTACCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGGGCTTCGGGCGCTTCTaGCAGAGGCCCAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWGFGRF*QRPRSL
Trigger: GAGTGACCTGGGCCTCTGCAAGAAGCGCCCGAAGCC...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGTGAAGTTCTCCCCCTaGGTGGTTGTGGTGACCGTG +
Preference number: 5 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKVKFSP*VVVVTV
Trigger: CACGGTCACCACAACCACCAAGGGGGAGAACTTCAC...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGGTGAAGTTCTCCCCCTaGGTGGTTGTGGTGACCGTG +
Preference number: 5 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWVKFSP*VVVVTV
Trigger: CACGGTCACCACAACCACCAAGGGGGAGAACTTCAC...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGTGAAGTTCTCCCCCTaGGTGGTTGTGGTGACCGTG +
Preference number: 5 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMVKFSP*VVVVTV
Trigger: CACGGTCACCACAACCACCAAGGGGGAGAACTTCAC...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS TCA 90 bp TGTTTTCACGATAGTAACGGTCCTCATAGTCACTGCCGAAATGTATaGTGGGCCTGCTCATGGCACTTCCCAGCATGTAGCCGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: CFHDSNGPHSHCRNV*WACSWHFPACSRQG
Trigger: GCCTTGGCGGCTACATGCTGGGAAGTGCCATGAGCAGGCCCATCATACATTTCGGCAGTGACTATGAGGACCGTTACTATCGTGAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS GCA 90 bp GTCTCGGTGAAGTTCTCCCCCTTGGTGGTTGTGGTGACCGTGTGCTaGTTGATTGTGATATTGACGCAGTCGTGCACAAAGTTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: VSVKFSPLVVVVTVC*LIVILTQSCTKLFW
Trigger: CCAGAACAACTTTGTGCACGACTGCGTCAATATCACAATCAAGCAGCACACGGTCACCACAACCACCAAGGGGGAGAACTTCACCGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS GCA 90 bp GGAAAGAGATCAGGAGGATCACAGGTGGAGAGGAGAAGAGGACCATaGTCGATCCTCTCTGGTAATAGGCCTGAGATTCCCTCTCGTACT +
Preference number: 5 (lower is better)
Translates to: GKRSGGSQVERRRGP*SILSGNRPEIPSRT
Trigger: AGTACGAGAGGGAATCTCAGGCCTATTACCAGAGAGGATCGAGCATGGTCCTCTTCTCCTCTCCACCTGTGATCCTCCTGATCTCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACGGCTTCGGGCGCTTCTaGCAGAGGCCCAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDGFGRF*QRPRSL
Trigger: GAGTGACCTGGGCCTCTGCAAGAAGCGCCCGAAGCC...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGTCAGTGCCAAGGGTATaGATTAGCCTATCCGGGACA +
Preference number: 5 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWSVPRV*ISLSGT
Trigger: TGTCCCGGATAGGCTAATCAATACCCTTGGCACTGA...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGTCAATCAAAGGGGGCTaGACCAGCATCTCAGGTCTA +
Preference number: 5 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWSIKGG*TSISGL
Trigger: TAGACCTGAGATGCTGGTCAAGCCCCCTTTGATTGA...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCGGCTTCGGGCGCTTCTaGCAGAGGCCCAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSGFGRF*QRPRSL
Trigger: GAGTGACCTGGGCCTCTGCAAGAAGCGCCCGAAGCC...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGCCATGTGCTTCATGTaGGTTTTTGGCTTACTCGGC +
Preference number: 5 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMAMCFM*VFGLLG
Trigger: GCCGAGTAAGCCAAAAACCAACATGAAGCACATGGC...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGACAAAGTTGTTCTGGTaGCTGTACTCATCCATGGGC +
Preference number: 5 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWTKLFW*LYSSMG
Trigger: GCCCATGGATGAGTACAGCAACCAGAACAACTTTGT...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGCAGTCGTGCACAAAGTaGTTCTGGTTGCTGTACTCA +
Preference number: 5 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWQSCTK*FWLLYS
Trigger: TGAGTACAGCAACCAGAACAACTTTGTGCACGACTG...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGTCAGTGCCAAGGGTATaGATTAGCCTATCCGGGACA +
Preference number: 5 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMSVPRV*ISLSGT
Trigger: TGTCCCGGATAGGCTAATCAATACCCTTGGCACTGA...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGTCAATCAAAGGGGGCTaGACCAGCATCTCAGGTCTA +
Preference number: 5 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMSIKGG*TSISGL
Trigger: TAGACCTGAGATGCTGGTCAAGCCCCCTTTGATTGA...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS TCA 90 bp GATGGTGAAAACAGGAAGACCTTCCTCATCCCACTATCAGGAAGATaGGGAAAGAGATCAGGAGGATCACAGGTGGAGAGGAGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: DGENRKTFLIPLSGR*GKRSGGSQVERRRG
Trigger: TCCTCTTCTCCTCTCCACCTGTGATCCTCCTGATCTCTTTCCTCATCTTCCTGATAGTGGGATGAGGAAGGTCTTCCTGTTTTCACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGACAAAGTTGTTCTGGTaGCTGTACTCATCCATGGGC +
Preference number: 5 (lower is better)
Translates to: KGCRWIPPPSSWKKIRKMTKLFW*LYSSMG
Trigger: GCCCATGGATGAGTACAGCAACCAGAACAACTTTGT...CATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAACAATATTTACTCTTGTaGAACAGCTGCTGTGTAGCC +
Preference number: 5 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKQYLLL*NSCCVA
Trigger: GGCTACACAGCAGCTGTTCAACAAGAGTAAATATTG...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp ACACCACCACTAAAAGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAACCATTCCCAAACATTaGATTTCAAGTCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: TPPLKGLQVDTASLKLEKTIPKH*ISSPRS
Trigger: GCTTCTGGGACTTGAAATCAAATGTTTGGGAATGGT...TTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCTTTTAGTGGTGGTGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGATGGACAAAGGAGATTaGCCTTCAGTGTCTAGAAGG +
Preference number: 5 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWMDKGD*PSVSRR
Trigger: CCTTCTAGACACTGAAGGCAAATCTCCTTTGTCCAT...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CCA 90 bp TGTTCTGGTTGCTGTACTCATCCATGGGCCTGTAGTACACTTGGTTaGGGTAACGGTGCATGTTTTCACGATAGTAACGGTCCTCATAGT +
Preference number: 5 (lower is better)
Translates to: CSGCCTHPWACSTLG*GNGACFHDSNGPHS
Trigger: ACTATGAGGACCGTTACTATCGTGAAAACATGCACCGTTACCCCAACCAAGTGTACTACAGGCCCATGGATGAGTACAGCAACCAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCGGCTTCGGGCGCTTCTaGCAGAGGCCCAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFGFGRF*QRPRSL
Trigger: GAGTGACCTGGGCCTCTGCAAGAAGCGCCCGAAGCC...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AGGGCTGCAGGTGGATACCGCCTCCCTCAAGCTGGAAAAAGATTAGAAAGATGGCAATATTTACTCTTGTaGAACAGCTGCTGTGTAGCC +
Preference number: 5 (lower is better)
Translates to: RAAGGYRLPQAGKRLERWQYLLL*NSCCVA
Trigger: GGCTACACAGCAGCTGTTCAACAAGAGTAAATATTG...CCATCTTTCTAATCTTTTTCCAGCTTGAGGGAGGCGGTATCCACCTGCAGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATGGGCCTGTAGTACACTaGGTTGGGGTAACGGTGCAT +
Preference number: 5 (lower is better)
Translates to: MVICCYTFTGLALATAHDGPVVH*VGVTVH
Trigger: ATGCACCGTTACCCCAACCAAGTGTACTACAGGCCC...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAAGCCATGTGCTTCATGTaGGTTTTTGGCTTACTCGGC +
Preference number: 5 (lower is better)
Translates to: IILYDDGAFTTAALLYVKAMCFM*VFGLLG
Trigger: GCCGAGTAAGCCAAAAACCAACATGAAGCACATGGC...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCGGGCCTGTAGTACACTaGGTTGGGGTAACGGTGCAT +
Preference number: 5 (lower is better)
Translates to: SAALITYSLKKGMPHIGSGPVVH*VGVTVH
Trigger: ATGCACCGTTACCCCAACCAAGTGTACTACAGGCCC...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATGGGCCTGTAGTACACTaGGTTGGGGTAACGGTGCAT +
Preference number: 5 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNGPVVH*VGVTVH
Trigger: ATGCACCGTTACCCCAACCAAGTGTACTACAGGCCC...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATGTGACCGTGTGCTGCTaGATTGTGATATTGACGCAG +
Preference number: 5 (lower is better)
Translates to: MVICCYTFTGLALATAHDVTVCC*IVILTQ
Trigger: CTGCGTCAATATCACAATCAAGCAGCACACGGTCAC...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACTCAGTGCCAAGGGTATaGATTAGCCTATCCGGGACA +
Preference number: 5 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDSVPRV*ISLSGT
Trigger: TGTCCCGGATAGGCTAATCAATACCCTTGGCACTGA...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATTCAATCAAAGGGGGCTaGACCAGCATCTCAGGTCTA +
Preference number: 5 (lower is better)
Translates to: MVICCYTFTGLALATAHDSIKGG*TSISGL
Trigger: TAGACCTGAGATGCTGGTCAAGCCCCCTTTGATTGA...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATGCTTCATGTTGGTTTTaGGCTTACTCGGCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: MVICCYTFTGLALATAHDASCWF*AYSACS
Trigger: GGAACAAGCCGAGTAAGCCAAAAACCAACATGAAGC...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCGCCATGTGCTTCATGTaGGTTTTTGGCTTACTCGGC +
Preference number: 5 (lower is better)
Translates to: SAALITYSLKKGMPHIGSAMCFM*VFGLLG
Trigger: GCCGAGTAAGCCAAAAACCAACATGAAGCACATGGC...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCGGGCCTGTAGTACACTaGGTTGGGGTAACGGTGCAT +
Preference number: 5 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFGPVVH*VGVTVH
Trigger: ATGCACCGTTACCCCAACCAAGTGTACTACAGGCCC...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATCAGTCGTGCACAAAGTaGTTCTGGTTGCTGTACTCA +
Preference number: 5 (lower is better)
Translates to: MVICCYTFTGLALATAHDQSCTK*FWLLYS
Trigger: TGAGTACAGCAACCAGAACAACTTTGTGCACGACTG...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAATGCTTGATTGTGATATaGACGCAGTCGTGCACAAAG +
Preference number: 5 (lower is better)
Translates to: IILYDDGAFTTAALLYVKCLIVI*TQSCTK
Trigger: CTTTGTGCACGACTGCGTCAATATCACAATCAAGCA...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATGTGACCGTGTGCTGCTaGATTGTGATATTGACGCAG +
Preference number: 5 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNVTVCC*IVILTQ
Trigger: CTGCGTCAATATCACAATCAAGCAGCACACGGTCAC...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCGTGACCGTGTGCTGCTaGATTGTGATATTGACGCAG +
Preference number: 5 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSVTVCC*IVILTQ
Trigger: CTGCGTCAATATCACAATCAAGCAGCACACGGTCAC...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCACAAAGTTGTTCTGGTaGCTGTACTCATCCATGGGC +
Preference number: 5 (lower is better)
Translates to: SAALITYSLKKGMPHIGSTKLFW*LYSSMG
Trigger: GCCCATGGATGAGTACAGCAACCAGAACAACTTTGT...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCCAGTCGTGCACAAAGTaGTTCTGGTTGCTGTACTCA +
Preference number: 5 (lower is better)
Translates to: SAALITYSLKKGMPHIGSQSCTK*FWLLYS
Trigger: TGAGTACAGCAACCAGAACAACTTTGTGCACGACTG...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCCAGTCGTGCACAAAGTaGTTCTGGTTGCTGTACTCA +
Preference number: 5 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSQSCTK*FWLLYS
Trigger: TGAGTACAGCAACCAGAACAACTTTGTGCACGACTG...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACTGCTTGATTGTGATATaGACGCAGTCGTGCACAAAG +
Preference number: 5 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDCLIVI*TQSCTK
Trigger: CTTTGTGCACGACTGCGTCAATATCACAATCAAGCA...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATATGGACAAAGGAGATTaGCCTTCAGTGTCTAGAAGG +
Preference number: 5 (lower is better)
Translates to: MVICCYTFTGLALATAHDMDKGD*PSVSRR
Trigger: CCTTCTAGACACTGAAGGCAAATCTCCTTTGTCCAT...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCGCCATGTGCTTCATGTaGGTTTTTGGCTTACTCGGC +
Preference number: 5 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFAMCFM*VFGLLG
Trigger: GCCGAGTAAGCCAAAAACCAACATGAAGCACATGGC...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCTGCTTGATTGTGATATaGACGCAGTCGTGCACAAAG +
Preference number: 5 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSCLIVI*TQSCTK
Trigger: CTTTGTGCACGACTGCGTCAATATCACAATCAAGCA...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCTGCTTGATTGTGATATaGACGCAGTCGTGCACAAAG +
Preference number: 5 (lower is better)
Translates to: SAALITYSLKKGMPHIGSCLIVI*TQSCTK
Trigger: CTTTGTGCACGACTGCGTCAATATCACAATCAAGCA...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCGTGACCGTGTGCTGCTaGATTGTGATATTGACGCAG +
Preference number: 5 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFVTVCC*IVILTQ
Trigger: CTGCGTCAATATCACAATCAAGCAGCACACGGTCAC...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCTCAGTGCCAAGGGTATaGATTAGCCTATCCGGGACA +
Preference number: 5 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFSVPRV*ISLSGT
Trigger: TGTCCCGGATAGGCTAATCAATACCCTTGGCACTGA...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp ATCATCCTCTATGATGATGGTGCTTTCACAACTGCAGCTCTCCTGTATGTCAAAAACCTGGCAGAAATGTaGTCGGGTTTTCTTAAAATG +
Preference number: 5 (lower is better)
Translates to: IILYDDGAFTTAALLYVKNLAEM*SGFLKM
Trigger: CATTTTAAGAAAACCCGACAACATTTCTGCCAGGTT...TTTGACATACAGGAGAGCTGCAGTTGTGAAAGCACCATCATCATAGAGGATGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACCAATATTTACTCTTGTaGAACAGCTGCTGTGTAGCC +
Preference number: 5 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDQYLLL*NSCCVA
Trigger: GGCTACACAGCAGCTGTTCAACAAGAGTAAATATTG...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp ATGGTTATTTGCTGTTATACTTTTACTGGCCTGGCATTAGCAACGGCTCATGATACCATTCCCAAACATTaGATTTCAAGTCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: MVICCYTFTGLALATAHDTIPKH*ISSPRS
Trigger: GCTTCTGGGACTTGAAATCAAATGTTTGGGAATGGT...ATCATGAGCCGTTGCTAATGCCAGGCCAGTAAAAGTATAACAGCAAATAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCATGGACAAAGGAGATTaGCCTTCAGTGTCTAGAAGG +
Preference number: 5 (lower is better)
Translates to: SAALITYSLKKGMPHIGSMDKGD*PSVSRR
Trigger: CCTTCTAGACACTGAAGGCAAATCTCCTTTGTCCAT...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TCCACTTTGGATTCTTACATGAAACGATTCAGTGCACATTGTAAGCCTAAGGACAACCTGGCAGAAATGTaGTCGGGTTTTCTTAAAATG +
Preference number: 5 (lower is better)
Translates to: STLDSYMKRFSAHCKPKDNLAEM*SGFLKM
Trigger: CATTTTAAGAAAACCCGACAACATTTCTGCCAGGTT...GTCCTTAGGCTTACAATGTGCACTGAATCGTTTCATGTAAGAATCCAAAGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp GTTCTGAGATTTGTTTTAGCCTCAACCTGTTGCACTAAGTCCAAAAATAAGTCCACCATTCCCAAACATTaGATTTCAAGTCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: VLRFVLASTCCTKSKNKSTIPKH*ISSPRS
Trigger: GCTTCTGGGACTTGAAATCAAATGTTTGGGAATGGT...GGACTTATTTTTGGACTTAGTGCAACAGGTTGAGGCTAAAACAAATCTCAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCAACCTGGCAGAAATGTaGTCGGGTTTTCTTAAAATG +
Preference number: 5 (lower is better)
Translates to: SAALITYSLKKGMPHIGSNLAEM*SGFLKM
Trigger: CATTTTAAGAAAACCCGACAACATTTCTGCCAGGTT...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCCAATATTTACTCTTGTaGAACAGCTGCTGTGTAGCC +
Preference number: 5 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFQYLLL*NSCCVA
Trigger: GGCTACACAGCAGCTGTTCAACAAGAGTAAATATTG...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TATTTCAAAGACCTGTTAATGGTGTCCACTTTGGATTCTTACATGAAACGATTCACCATTCCCAAACATTaGATTTCAAGTCCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: YFKDLLMVSTLDSYMKRFTIPKH*ISSPRS
Trigger: GCTTCTGGGACTTGAAATCAAATGTTTGGGAATGGT...GAATCGTTTCATGTAAGAATCCAAAGTGGACACCATTAACAGGTCTTTGAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp AAGGAGATTTGCCTTCAGTGTCTAGAAGGCAATTTACTTTTCAGCTGCCTTAATTTAATGGTGTCCACTTaGGATTCTTACATGAAACGA +
Preference number: 5 (lower is better)
Translates to: KEICLQCLEGNLLFSCLNLMVST*DSYMKR
Trigger: TCGTTTCATGTAAGAATCCAAAGTGGACACCATTAA...ATTAAGGCAGCTGAAAAGTAAATTGCCTTCTAGACACTGAAGGCAAATCTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS-3UTR CAA 90 bp TCAGCTGCCTTAATTACCTATAGTTTAAAGAAAGGAATGCCACATATAGGGTCCTTAATGGTGTCCACTTaGGATTCTTACATGAAACGA +
Preference number: 5 (lower is better)
Translates to: SAALITYSLKKGMPHIGSLMVST*DSYMKR
Trigger: TCGTTTCATGTAAGAATCCAAAGTGGACACCATTAA...GGACCCTATATGTGGCATTCCTTTCTTTAAACTATAGGTAATTAAGGCAGCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CCA 72 bp AGAGGAGAAGCTCGCGGCGCCGCGGCTGTCAGCGACTaGCTCGGAGGACAGGCGACGCGCGGGGCCGAGGGG +
Preference number: 6 (lower is better)
Translates to: RGEARGAAAVSD*LGGQATRGAEG
Trigger: CCCCTCGGCCCCGCGCGTCGCCTGTCCTCCGAGCCAGTCGCTGACAGCCGCGGCGCCGCGAGCTTCTCCTCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430350.2
CDS GCA 72 bp GCCCCCAGCCACCACCGCCCTGAGGTGGGTAGCGGTTaGCTCCAGGGCTGCCCTGCCCCGGGTATCGGCTGC +
Preference number: 6 (lower is better)
Translates to: APSHHRPEVGSG*LQGCPAPGIGC
Trigger: GCAGCCGATACCCGGGGCAGGGCAGCCCTGGAGGCAACCGCTACCCACCTCAGGGCGGTGGTGGCTGGGGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS GCA 72 bp CACCGCCCTGAGGTGGGTAGCGGTTGCCTCCAGGGCTaGCCTGCCCCGGGTATCGGCTGCCCCCAGTGTTCC +
Preference number: 6 (lower is better)
Translates to: HRPEVGSGCLQG*PAPGIGCPQCS
Trigger: GGAACACTGGGGGCAGCCGATACCCGGGGCAGGGCAGCCCTGGAGGCAACCGCTACCCACCTCAGGGCGGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS GCA 72 bp GGTTGCCTCCAGGGCTGCCCTGCCCCGGGTATCGGCTaGCCCCAGTGTTCCATCCTCCAGGCTTCGGGCGCT +
Preference number: 6 (lower is better)
Translates to: GCLQGCPAPGIG*PQCSILQASGA
Trigger: AGCGCCCGAAGCCTGGAGGATGGAACACTGGGGGCAGCCGATACCCGGGGCAGGGCAGCCCTGGAGGCAACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CAA 72 bp CCCCCAGTGTTCCATCCTCCAGGCTTCGGGCGCTTCTaGCAGAGGCCCAGGTCACTCCATGTGGCCACAAAG +
Preference number: 6 (lower is better)
Translates to: PPVFHPPGFGRF*QRPRSLHVATK
Trigger: CTTTGTGGCCACATGGAGTGACCTGGGCCTCTGCAAGAAGCGCCCGAAGCCTGGAGGATGGAACACTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CAA 90 bp TATCGGCTGCCCCCAGTGTTCCATCCTCCAGGCTTCGGGCGCTTCTaGCAGAGGCCCAGGTCACTCCATGTGGCCACAAAGAGAACCAGC +
Preference number: 6 (lower is better)
Translates to: YRLPPVFHPPGFGRF*QRPRSLHVATKRTS
Trigger: GCTGGTTCTCTTTGTGGCCACATGGAGTGACCTGGGCCTCTGCAAGAAGCGCCCGAAGCCTGGAGGATGGAACACTGGGGGCAGCCGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CAA 90 bp ACGCGCTCCATCATCTTAACGTCGGTCTCGGTGAAGTTCTCCCCCTaGGTGGTTGTGGTGACCGTGTGCTGCTTGATTGTGATATTGACG +
Preference number: 6 (lower is better)
Translates to: TRSIILTSVSVKFSP*VVVVTVCCLIVILT
Trigger: CGTCAATATCACAATCAAGCAGCACACGGTCACCACAACCACCAAGGGGGAGAACTTCACCGAGACCGACGTTAAGATGATGGAGCGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CAA 72 bp ATCATCTTAACGTCGGTCTCGGTGAAGTTCTCCCCCTaGGTGGTTGTGGTGACCGTGTGCTGCTTGATTGTG +
Preference number: 6 (lower is better)
Translates to: IILTSVSVKFSP*VVVVTVCCLIV
Trigger: CACAATCAAGCAGCACACGGTCACCACAACCACCAAGGGGGAGAACTTCACCGAGACCGACGTTAAGATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CAA 90 bp TCCCCCTTGGTGGTTGTGGTGACCGTGTGCTGCTTGATTGTGATATaGACGCAGTCGTGCACAAAGTTGTTCTGGTTGCTGTACTCATCC +
Preference number: 6 (lower is better)
Translates to: SPLVVVVTVCCLIVI*TQSCTKLFWLLYSS
Trigger: GGATGAGTACAGCAACCAGAACAACTTTGTGCACGACTGCGTCAATATCACAATCAAGCAGCACACGGTCACCACAACCACCAAGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CAA 90 bp TCGGTGAAGTTCTCCCCCTTGGTGGTTGTGGTGACCGTGTGCTGCTaGATTGTGATATTGACGCAGTCGTGCACAAAGTTGTTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: SVKFSPLVVVVTVCC*IVILTQSCTKLFWL
Trigger: CAACCAGAACAACTTTGTGCACGACTGCGTCAATATCACAATCAAGCAGCACACGGTCACCACAACCACCAAGGGGGAGAACTTCACCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS TCA 72 bp GATAGTAACGGTCCTCATAGTCACTGCCGAAATGTATaGTGGGCCTGCTCATGGCACTTCCCAGCATGTAGC +
Preference number: 6 (lower is better)
Translates to: DSNGPHSHCRNV*WACSWHFPACS
Trigger: GCTACATGCTGGGAAGTGCCATGAGCAGGCCCATCATACATTTCGGCAGTGACTATGAGGACCGTTACTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS TCA 72 bp TCTGGTAATAGGCCTGAGATTCCCTCTCGTACTGGGTaGTACACATCTGCTCAACCACGCGCTCCATCATCT +
Preference number: 6 (lower is better)
Translates to: SGNRPEIPSRTG*YTSAQPRAPSS
Trigger: AGATGATGGAGCGCGTGGTTGAGCAGATGTGTATCACCCAGTACGAGAGGGAATCTCAGGCCTATTACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS GCA 72 bp AAGTTCTCCCCCTTGGTGGTTGTGGTGACCGTGTGCTaGTTGATTGTGATATTGACGCAGTCGTGCACAAAG +
Preference number: 6 (lower is better)
Translates to: KFSPLVVVVTVC*LIVILTQSCTK
Trigger: CTTTGTGCACGACTGCGTCAATATCACAATCAAGCAGCACACGGTCACCACAACCACCAAGGGGGAGAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CCA 72 bp CGTGCACAAAGTTGTTCTGGTTGCTGTACTCATCCATaGGCCTGTAGTACACTTGGTTGGGGTAACGGTGCA +
Preference number: 6 (lower is better)
Translates to: RAQSCSGCCTHP*ACSTLGWGNGA
Trigger: TGCACCGTTACCCCAACCAAGTGTACTACAGGCCCATGGATGAGTACAGCAACCAGAACAACTTTGTGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CAA 72 bp TTCTCCCCCTTGGTGGTTGTGGTGACCGTGTGCTGCTaGATTGTGATATTGACGCAGTCGTGCACAAAGTTG +
Preference number: 6 (lower is better)
Translates to: FSPLVVVVTVCC*IVILTQSCTKL
Trigger: CAACTTTGTGCACGACTGCGTCAATATCACAATCAAGCAGCACACGGTCACCACAACCACCAAGGGGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS TCA 72 bp AACAGGAAGACCTTCCTCATCCCACTATCAGGAAGATaGGGAAAGAGATCAGGAGGATCACAGGTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: NRKTFLIPLSGR*GKRSGGSQVER
Trigger: CCTCTCCACCTGTGATCCTCCTGATCTCTTTCCTCATCTTCCTGATAGTGGGATGAGGAAGGTCTTCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CAA 72 bp GTGGTTGTGGTGACCGTGTGCTGCTTGATTGTGATATaGACGCAGTCGTGCACAAAGTTGTTCTGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: VVVVTVCCLIVI*TQSCTKLFWLL
Trigger: CAGCAACCAGAACAACTTTGTGCACGACTGCGTCAATATCACAATCAAGCAGCACACGGTCACCACAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CCA 72 bp TGCTGTACTCATCCATGGGCCTGTAGTACACTTGGTTaGGGTAACGGTGCATGTTTTCACGATAGTAACGGT +
Preference number: 6 (lower is better)
Translates to: CCTHPWACSTLG*GNGACFHDSNG
Trigger: ACCGTTACTATCGTGAAAACATGCACCGTTACCCCAACCAAGTGTACTACAGGCCCATGGATGAGTACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CAA 72 bp CTGGTTGCTGTACTCATCCATGGGCCTGTAGTACACTaGGTTGGGGTAACGGTGCATGTTTTCACGATAGTA +
Preference number: 6 (lower is better)
Translates to: LVAVLIHGPVVH*VGVTVHVFTIV
Trigger: TACTATCGTGAAAACATGCACCGTTACCCCAACCAAGTGTACTACAGGCCCATGGATGAGTACAGCAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS CAA 90 bp AAAGTTGTTCTGGTTGCTGTACTCATCCATGGGCCTGTAGTACACTaGGTTGGGGTAACGGTGCATGTTTTCACGATAGTAACGGTCCTC +
Preference number: 6 (lower is better)
Translates to: KVVLVAVLIHGPVVH*VGVTVHVFTIVTVL
Trigger: GAGGACCGTTACTATCGTGAAAACATGCACCGTTACCCCAACCAAGTGTACTACAGGCCCATGGATGAGTACAGCAACCAGAACAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2
CDS GCA 72 bp ACCGTGTGCTGCTTGATTGTGATATTGACGCAGTCGTaGACAAAGTTGTTCTGGTTGCTGTACTCATCCATG +
Preference number: 6 (lower is better)
Translates to: TVCCLIVILTQS*TKLFWLLYSSM
Trigger: CATGGATGAGTACAGCAACCAGAACAACTTTGTGCACGACTGCGTCAATATCACAATCAAGCAGCACACGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379440.9
ENST00000424424.2
ENST00000430350.2
ENST00000457586.2