RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRMT9 (Homo sapiens)

Ensembl gene IDs: ENSG00000164169

Ensembl transcript IDs: ENST00000322396.7, ENST00000510269.5, ENST00000514886.1

Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAATACGATGCTGGTCTTTCTCCACAGAACTGTATGGTTTAACCTaGCCAAGTGTGCCAGCAATAACAGGCAGAACAGAGAAGCCTTCG +
Preference number: 1 (lower is better)
Translates to: AIRCWSFSTELYGLT*PSVPAITGRTEKPS
Trigger: CGAAGGCTTCTCTGTTCTGCCTGTTATTGCTGGCACACTTGGGCAGGTTAAACCATACAGTTCTGTGGAGAAAGACCAGCATCGTATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 90 bp GAGGTCCAGAGCAATACGATGCTGGTCTTTCTCCACAGAACTGTATaGTTTAACCTGCCCAAGTGTGCCAGCAATAACAGGCAGAACAGA +
Preference number: 1 (lower is better)
Translates to: EVQSNTMLVFLHRTV*FNLPKCASNNRQNR
Trigger: TCTGTTCTGCCTGTTATTGCTGGCACACTTGGGCAGGTTAAACCATACAGTTCTGTGGAGAAAGACCAGCATCGTATTGCTCTGGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 90 bp CTTCCATCTTGTTTGCTGCCACGACATCACAGGCAAGTTCATACATaGTCTTGGATAACTCACAGGCATACACGGAATGTGCTCCAGCTT +
Preference number: 1 (lower is better)
Translates to: LPSCLLPRHHRQVHT*SWITHRHTRNVLQL
Trigger: AAGCTGGAGCACATTCCGTGTATGCCTGTGAGTTATCCAAGACCATGTATGAACTTGCCTGTGATGTCGTGGCAGCAAACAAGATGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR TCA 90 bp GATTCCAATATACATGTCTGCTCTACAGCATCTGGTTTACTGGTCTaGAGGTTAGCGAGGGCACTACAAAGTTCAGCCTCATTTCCTAAC +
Preference number: 1 (lower is better)
Translates to: DSNIHVCSTASGLLV*RLARALQSSASFPN
Trigger: GTTAGGAAATGAGGCTGAACTTTGTAGTGCCCTCGCTAACCTTCAGACCAGTAAACCAGATGCTGTAGAGCAGACATGTATATTGGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR TCA 90 bp TCCTCCACATGTCTCAGCCAAAACTCAAGTGTTTCTTTAGGAAAGTaGTTGGCTTCAGATATGAGGTCCAGAGCAATACGATGCTGGTCT +
Preference number: 1 (lower is better)
Translates to: SSTCLSQNSSVSLGK*LASDMRSRAIRCWS
Trigger: AGACCAGCATCGTATTGCTCTGGACCTCATATCTGAAGCCAATCACTTTCCTAAAGAAACACTTGAGTTTTGGCTGAGACATGTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 90 bp TCTGTCCAGTTCCAGAGCTCATCTCATTCTGACAGTGAGTATCCATaGTCTGATACAGTTTCTCTGGAGTCAGTGAAGACAAAACTTTGC +
Preference number: 1 (lower is better)
Translates to: SVQFQSSSHSDSEYP*SDTVSLESVKTKLC
Trigger: GCAAAGTTTTGTCTTCACTGACTCCAGAGAAACTGTATCAGACCATGGATACTCACTGTCAGAATGAGATGAGCTCTGGAACTGGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR TCA 90 bp AGGAGTGTCTGTGATTCCACAAGCAACCCAAACATCAGCACATACTaGGGAAAGATCTTGCCTCCAGATTGTAGTAAACACCTGGATATT +
Preference number: 1 (lower is better)
Translates to: RSVCDSTSNPNISTY*GKILPPDCSKHLDI
Trigger: AATATCCAGGTGTTTACTACAATCTGGAGGCAAGATCTTTCCTCAGTATGTGCTGATGTTTGGGTTGCTTGTGGAATCACAGACACTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 90 bp AGCAATTTCTGTAGATTCCAATATACATGTCTGCTCTACAGCATCTaGTTTACTGGTCTGAAGGTTAGCGAGGGCACTACAAAGTTCAGC +
Preference number: 1 (lower is better)
Translates to: SNFCRFQYTCLLYSI*FTGLKVSEGTTKFS
Trigger: GCTGAACTTTGTAGTGCCCTCGCTAACCTTCAGACCAGTAAACCAGATGCTGTAGAGCAGACATGTATATTGGAATCTACAGAAATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 90 bp TCAACCTGGATGGGATTATCTAAAACAACTGCAGCTTGTTTCCAGTaGGAGGCTTCACTTGAAGTATCCAACCTAATCTCTTCATCAAGG +
Preference number: 1 (lower is better)
Translates to: STWMGLSKTTAACFQ*EASLEVSNLISSSR
Trigger: CCTTGATGAAGAGATTAGGTTGGATACTTCAAGTGAAGCCTCCCACTGGAAACAAGCTGCAGTTGTTTTAGATAATCCCATCCAGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR GCA 90 bp GGTGTCATTAAGCATGATAAAGTGCCAGCGTTCCACCAACCAGTTTaGAACACGATAAAAATTCTCCTTTGCATCACTGAAATCAGGGTT +
Preference number: 1 (lower is better)
Translates to: GVIKHDKVPAFHQPV*NTIKILLCITEIRV
Trigger: AACCCTGATTTCAGTGATGCAAAGGAGAATTTTTATCGTGTTGCAAACTGGTTGGTGGAACGCTGGCACTTTATCATGCTTAATGACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR GCA 90 bp ATTCCACAAGCAACCCAAACATCAGCACATACTGAGGAAAGATCTTaGCTCCAGATTGTAGTAAACACCTGGATATTGCAGCTTTTTCCA +
Preference number: 1 (lower is better)
Translates to: IPQATQTSAHTEERS*LQIVVNTWILQLFP
Trigger: TGGAAAAAGCTGCAATATCCAGGTGTTTACTACAATCTGGAGGCAAGATCTTTCCTCAGTATGTGCTGATGTTTGGGTTGCTTGTGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR TCA 90 bp CCACCAACCAGTTTGCAACACGATAAAAATTCTCCTTTGCATCACTaGAATCAGGGTTTAGCTTCACTGCTTTATGAAAATACCCAGCTG +
Preference number: 1 (lower is better)
Translates to: PPTSLQHDKNSPLHH*NQGLASLLYENTQL
Trigger: CAGCTGGGTATTTTCATAAAGCAGTGAAGCTAAACCCTGATTTCAGTGATGCAAAGGAGAATTTTTATCGTGTTGCAAACTGGTTGGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR TCA 90 bp CTTTCACCTTTGGTCTTTGGCTGTAAAAGTAAATGCTCCCATGCATaGATCAAACTCTCCACAATTCCTTCTCCAAATAAACCTGCATCG +
Preference number: 1 (lower is better)
Translates to: LSPLVFGCKSKCSHA*IKLSTIPSPNKPAS
Trigger: CGATGCAGGTTTATTTGGAGAAGGAATTGTGGAGAGTTTGATTCATGCATGGGAGCATTTACTTTTACAGCCAAAGACCAAAGGTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR GCA 90 bp TCTTATCTCTGCACATTCTACTGCCATCCCAAATATAACAGCACTTaGTGGTATAACTTTCCCATACTTTTCACAATTAGCACTTTCACC +
Preference number: 1 (lower is better)
Translates to: SYLCTFYCHPKYNST*WYNFPILFTISTFT
Trigger: GGTGAAAGTGCTAATTGTGAAAAGTATGGGAAAGTTATACCAGCAAGTGCTGTTATATTTGGGATGGCAGTAGAATGTGCAGAGATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 90 bp AGTATCTACAGAAGAATAAGCCGGACTCTGAAATTTCACATTTGTTaGCAAATGGATACCAGCAATGTCCTTAATACCCACTCTATGATG +
Preference number: 1 (lower is better)
Translates to: SIYRRISRTLKFHIC*QMDTSNVLNTHSMM
Trigger: CATCATAGAGTGGGTATTAAGGACATTGCTGGTATCCATTTGCCAACAAATGTGAAATTTCAGAGTCCGGCTTATTCTTCTGTAGATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 90 bp GTTTCCTCACTAGGACTTGTGGATAAACTATGTTCATCATCAAGCTaGAGCACAAACCAAACCATAATAGCATCTAGTATGCCTTCTTTA +
Preference number: 1 (lower is better)
Translates to: VSSLGLVDKLCSSSS*STNQTIIASSMPSL
Trigger: TAAAGAAGGCATACTAGATGCTATTATGGTTTGGTTTGTGCTCCAGCTTGATGATGAACATAGTTTATCCACAAGTCCTAGTGAGGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR TCA 90 bp GCTTCACTTGAAGTATCCAACCTAATCTCTTCATCAAGGTACATATaGTACCAAAATGGAATAGCAGTCAGTCTTCCAGATTTACAAACG +
Preference number: 1 (lower is better)
Translates to: ASLEVSNLISSSRYI*YQNGIAVSLPDLQT
Trigger: CGTTTGTAAATCTGGAAGACTGACTGCTATTCCATTTTGGTATCATATGTACCTTGATGAAGAGATTAGGTTGGATACTTCAAGTGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 90 bp TATCTCTGCACATTCTACTGCCATCCCAAATATAACAGCACTTGCTaGTATAACTTTCCCATACTTTTCACAATTAGCACTTTCACCTTT +
Preference number: 1 (lower is better)
Translates to: YLCTFYCHPKYNSTC*YNFPILFTISTFTF
Trigger: AAAGGTGAAAGTGCTAATTGTGAAAAGTATGGGAAAGTTATACCAGCAAGTGCTGTTATATTTGGGATGGCAGTAGAATGTGCAGAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 90 bp AGTATCCAACCTAATCTCTTCATCAAGGTACATATGATACCAAAATaGAATAGCAGTCAGTCTTCCAGATTTACAAACGTATACCTTTAC +
Preference number: 1 (lower is better)
Translates to: SIQPNLFIKVHMIPK*NSSQSSRFTNVYLY
Trigger: GTAAAGGTATACGTTTGTAAATCTGGAAGACTGACTGCTATTCCATTTTGGTATCATATGTACCTTGATGAAGAGATTAGGTTGGATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR GCA 90 bp AAACCTGCATCGACAGTTTCTGTTACAACTAGGGACACTCTTTCGGGAATATGTTTCCATCTTGTTTGCTaGCACGACATCACAGGCAAG +
Preference number: 2 (lower is better)
Translates to: KPASTVSVTTRDTLSGICFHLVC*HDITGK
Trigger: CTTGCCTGTGATGTCGTGGCAGCAAACAAGATGGAA...ACATATTCCCGAAAGAGTGTCCCTAGTTGTAACAGAAACTGTCGATGCAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR GCA 90 bp AAACCTGCATCGACAGTTTCTGTTACAACTAGGGACACTCTTTCGGGAATATGTTTAAGCATGATAAAGTaGCAGCGTTCCACCAACCAG +
Preference number: 2 (lower is better)
Translates to: KPASTVSVTTRDTLSGICLSMIK*QRSTNQ
Trigger: CTGGTTGGTGGAACGCTGGCACTTTATCATGCTTAA...ACATATTCCCGAAAGAGTGTCCCTAGTTGTAACAGAAACTGTCGATGCAGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR GCA 90 bp CTTAATACCCACTCTATGATGTCTTCTTATCTCTGCACATTCTACTGCCATCCCGGACCCCAAACAAACTaGCTTTTGGATTGCTGCATT +
Preference number: 2 (lower is better)
Translates to: LNTHSMMSSYLCTFYCHPGPQTN*LLDCCI
Trigger: AATGCAGCAATCCAAAAGGCAGTTTGTTTGGGGTCC...GGGATGGCAGTAGAATGTGCAGAGATAAGAAGACATCATAGAGTGGGTATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR TCA 90 bp AGCCTTCGGACACATCTAACACGTAGAAAGGTTCAAGGATGTTCTGTACAGTATAGCTTCACTGCTTTATaGAAATACCCAGCTGCTTCA +
Preference number: 2 (lower is better)
Translates to: SLRTHLTRRKVQGCSVQYSFTAL*KYPAAS
Trigger: TGAAGCAGCTGGGTATTTTCATAAAGCAGTGAAGCT...ATACTGTACAGAACATCCTTGAACCTTTCTACGTGTTAGATGTGTCCGAAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR TCA 90 bp ACCTGGATGGGATTATCTAAAACAACTGCAGCTTGTTTCCAGTGGGAGGCTTCAACACGTATAGGTACCTaGAACTGGTTAATAAAAGGT +
Preference number: 2 (lower is better)
Translates to: TWMGLSKTTAACFQWEASTRIGT*NWLIKG
Trigger: ACCTTTTATTAACCAGTTTCAGGTACCTATACGTGT...TGAAGCCTCCCACTGGAAACAAGCTGCAGTTGTTTTAGATAATCCCATCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR GCA 90 bp TCAAATACGGAGTCATTAAATCTAGTCTTAAGAGTTCCACTGGCTTGCTTAAAGTGCTTCCATCTTGTTTaGTGCCACGACATCACAGGC +
Preference number: 2 (lower is better)
Translates to: SNTESLNLVLRVPLACLKCFHLV*CHDITG
Trigger: GCCTGTGATGTCGTGGCAGCAAACAAGATGGAAGCA...CTTTAAGCAAGCCAGTGGAACTCTTAAGACTAGATTTAATGACTCCGTATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CAA 90 bp CCTGAGATGTTTCAGATGTACACTGAGTATTTAAAGGAAGCAAGATaGGAATTTACAGGTAACCATAACCCTCAGTCTTCAGTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: PEMFQMYTEYLKEAR*EFTGNHNPQSSVEA
Trigger: GGCTTCCACTGAAGACTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGTGTACATCTGAAACATCTCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
3UTR-3UTR TCA 90 bp AGAGCTCATCTCATTCTGACAGTGAGTATCCATGGTCTGATACAGTTTCTCTGGTTAATACCCACTCTATaGTGTCTTCTTATCTCTGCA +
Preference number: 2 (lower is better)
Translates to: RAHLILTVSIHGLIQFLWLIPTL*CLLISA
Trigger: TGCAGAGATAAGAAGACATCATAGAGTGGGTATTAA...CCAGAGAAACTGTATCAGACCATGGATACTCACTGTCAGAATGAGATGAGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CCA 90 bp AAGTGTTTCTTTAGGAAAGTGATTGGCTTCAGATATGAGGTCCAGAGCAATACGAGGCAAGTTCATACATaGTCTTGGATAACTCACAGG +
Preference number: 2 (lower is better)
Translates to: KCFFRKVIGFRYEVQSNTRQVHT*SWITHR
Trigger: CCTGTGAGTTATCCAAGACCATGTATGAACTTGCCT...CGTATTGCTCTGGACCTCATATCTGAAGCCAATCACTTTCCTAAAGAAACACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CAA 90 bp AGCCCAGATGGCTCAATGACATCCAATATAATTATGCTCCATAACTaGTCTGATTTTGGCCTTTGTAACATAGCAGATTCATCCTCCACA +
Preference number: 2 (lower is better)
Translates to: SPDGSMTSNIIMLHN*SDFGLCNIADSSST
Trigger: TGTGGAGGATGAATCTGCTATGTTACAAAGGCCAAAATCAGACAAGTTATGGAGCATAATTATATTGGATGTCATTGAGCCATCTGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CCA 90 bp GGATTCTTAAGTAACAGTCTTGACAAGATACTTCCATCATCACATGGTCTCCAGGTTCATACATGGTCTTaGATAACTCACAGGCATACA +
Preference number: 2 (lower is better)
Translates to: GFLSNSLDKILPSSHGLQVHTWS*ITHRHT
Trigger: TGTATGCCTGTGAGTTATCCAAGACCATGTATGAAC...CTGGAGACCATGTGATGATGGAAGTATCTTGTCAAGACTGTTACTTAAGAATCC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CCA 90 bp TCAAATACGGAGTCATTAAATCTAGTCTTAAGAGTTCCACTGGCTTGCTTAAAGAGAGCAATACGATGCTaGTCTTTCTCCACAGAACTG +
Preference number: 2 (lower is better)
Translates to: SNTESLNLVLRVPLACLKRAIRC*SFSTEL
Trigger: CAGTTCTGTGGAGAAAGACCAGCATCGTATTGCTCT...CTTTAAGCAAGCCAGTGGAACTCTTAAGACTAGATTTAATGACTCCGTATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR GCA 90 bp TCAAATACGGAGTCATTAAATCTAGTCTTAAGAGTTCCACTGGCTTGCTTAAAGATGTCTTCTTATCTCTaGACATTCTACTGCCATCCC +
Preference number: 2 (lower is better)
Translates to: SNTESLNLVLRVPLACLKMSSYL*TFYCHP
Trigger: GGGATGGCAGTAGAATGTGCAGAGATAAGAAGACAT...CTTTAAGCAAGCCAGTGGAACTCTTAAGACTAGATTTAATGACTCCGTATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CCA 90 bp CTGAGTACAAGTTCCTCTCCCATTTCAACCTGGATGGGATTATCTAAAACAACTACATTTGTTGGCAAATaGATACCAGCAATGTCCTTA +
Preference number: 2 (lower is better)
Translates to: LSTSSSPISTWMGLSKTTTFVGK*IPAMSL
Trigger: TAAGGACATTGCTGGTATCCATTTGCCAACAAATGT...AGTTGTTTTAGATAATCCCATCCAGGTTGAAATGGGAGAGGAACTTGTACTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CAA 90 bp ATCCTCCAGGAACTCGACTCATCTTTTCAGTTGTATAAGGTTCAATaGTTTCTTCAGTATCTACAGAAGAATAAGCCGGACTCTGAAATT +
Preference number: 2 (lower is better)
Translates to: ILQELDSSFQLYKVQ*FLQYLQKNKPDSEI
Trigger: AATTTCAGAGTCCGGCTTATTCTTCTGTAGATACTGAAGAAACAATTGAACCTTATACAACTGAAAAGATGAGTCGAGTTCCTGGAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR TCA 90 bp GTACTTGTTGATGCTCTATTTACACAGTTTTCATTGGAAAACTGCTCTTCATTGTCTCCTTTGCATCACTaGAATCAGGGTTTAGCTTCA +
Preference number: 2 (lower is better)
Translates to: VLVDALFTQFSLENCSSLSPLHH*NQGLAS
Trigger: TGAAGCTAAACCCTGATTTCAGTGATGCAAAGGAGA...CAATGAAGAGCAGTTTTCCAATGAAAACTGTGTAAATAGAGCATCAACAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR TCA 90 bp AATTTCACATTTGTTGGCAAATGGATACCAGCAATGTCCTTAATACCCACTCTAAAATGCTCCCATGCATaGATCAAACTCTCCACAATT +
Preference number: 2 (lower is better)
Translates to: NFTFVGKWIPAMSLIPTLKCSHA*IKLSTI
Trigger: AATTGTGGAGAGTTTGATTCATGCATGGGAGCATTT...TAGAGTGGGTATTAAGGACATTGCTGGTATCCATTTGCCAACAAATGTGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CAA 90 bp CTGTCAAAGCCAAATATCCTCCAGGAACTCGACTCATCTTTTCAGTaGTATAAGGTTCAATTGTTTCTTCAGTATCTACAGAAGAATAAG +
Preference number: 2 (lower is better)
Translates to: LSKPNILQELDSSFQ*YKVQLFLQYLQKNK
Trigger: CTTATTCTTCTGTAGATACTGAAGAAACAATTGAACCTTATACAACTGAAAAGATGAGTCGAGTTCCTGGAGGATATTTGGCTTTGACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CCA 90 bp TCAAATACGGAGTCATTAAATCTAGTCTTAAGAGTTCCACTGGCTTGCTTAAAGTATAACAGCACTTGCTaGTATAACTTTCCCATACTT +
Preference number: 2 (lower is better)
Translates to: SNTESLNLVLRVPLACLKYNSTC*YNFPIL
Trigger: AAGTATGGGAAAGTTATACCAGCAAGTGCTGTTATA...CTTTAAGCAAGCCAGTGGAACTCTTAAGACTAGATTTAATGACTCCGTATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 72 bp CTGCCACGACATCACAGGCAAGTTCATACATGGTCTTaGATAACTCACAGGCATACACGGAATGTGCTCCAG +
Preference number: 3 (lower is better)
Translates to: LPRHHRQVHTWS*ITHRHTRNVLQ
Trigger: CTGGAGCACATTCCGTGTATGCCTGTGAGTTATCCAAGACCATGTATGAACTTGCCTGTGATGTCGTGGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR GCA 72 bp TGCTGGTCTTTCTCCACAGAACTGTATGGTTTAACCTaGCCAAGTGTGCCAGCAATAACAGGCAGAACAGAG +
Preference number: 3 (lower is better)
Translates to: CWSFSTELYGLT*PSVPAITGRTE
Trigger: CTCTGTTCTGCCTGTTATTGCTGGCACACTTGGGCAGGTTAAACCATACAGTTCTGTGGAGAAAGACCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR TCA 72 bp ATACATGTCTGCTCTACAGCATCTGGTTTACTGGTCTaGAGGTTAGCGAGGGCACTACAAAGTTCAGCCTCA +
Preference number: 3 (lower is better)
Translates to: IHVCSTASGLLV*RLARALQSSAS
Trigger: TGAGGCTGAACTTTGTAGTGCCCTCGCTAACCTTCAGACCAGTAAACCAGATGCTGTAGAGCAGACATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 72 bp TGTTTGCTGCCACGACATCACAGGCAAGTTCATACATaGTCTTGGATAACTCACAGGCATACACGGAATGTG +
Preference number: 3 (lower is better)
Translates to: CLLPRHHRQVHT*SWITHRHTRNV
Trigger: CACATTCCGTGTATGCCTGTGAGTTATCCAAGACCATGTATGAACTTGCCTGTGATGTCGTGGCAGCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 72 bp AGCAATACGATGCTGGTCTTTCTCCACAGAACTGTATaGTTTAACCTGCCCAAGTGTGCCAGCAATAACAGG +
Preference number: 3 (lower is better)
Translates to: SNTMLVFLHRTV*FNLPKCASNNR
Trigger: CCTGTTATTGCTGGCACACTTGGGCAGGTTAAACCATACAGTTCTGTGGAGAAAGACCAGCATCGTATTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 72 bp TTGGCTTCAGATATGAGGTCCAGAGCAATACGATGCTaGTCTTTCTCCACAGAACTGTATGGTTTAACCTGC +
Preference number: 3 (lower is better)
Translates to: LASDMRSRAIRC*SFSTELYGLTC
Trigger: GCAGGTTAAACCATACAGTTCTGTGGAGAAAGACCAGCATCGTATTGCTCTGGACCTCATATCTGAAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CAA 90 bp AAGCAAAGCAATTTCTGTAGATTCCAATATACATGTCTGCTCTACAGCATCTGGCTGCTTCCATCTTGTTaGCTGCCACGACATCACAGG +
Preference number: 3 (lower is better)
Translates to: KQSNFCRFQYTCLLYSIWLLPSC*LPRHHR
Trigger: CCTGTGATGTCGTGGCAGCAAACAAGATGGAAGCAG...CCAGATGCTGTAGAGCAGACATGTATATTGGAATCTACAGAAATTGCTTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 72 bp TGTAGATTCCAATATACATGTCTGCTCTACAGCATCTaGTTTACTGGTCTGAAGGTTAGCGAGGGCACTACA +
Preference number: 3 (lower is better)
Translates to: CRFQYTCLLYSI*FTGLKVSEGTT
Trigger: TGTAGTGCCCTCGCTAACCTTCAGACCAGTAAACCAGATGCTGTAGAGCAGACATGTATATTGGAATCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 72 bp TTCCAGAGCTCATCTCATTCTGACAGTGAGTATCCATaGTCTGATACAGTTTCTCTGGAGTCAGTGAAGACA +
Preference number: 3 (lower is better)
Translates to: FQSSSHSDSEYP*SDTVSLESVKT
Trigger: TGTCTTCACTGACTCCAGAGAAACTGTATCAGACCATGGATACTCACTGTCAGAATGAGATGAGCTCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CAA 90 bp TGGTTTACTGGTCTGAAGGTTAGCGAGGGCACTACAAAGTTCAGCCTCATTTCCGAAATTTCACATTTGTaGGCAAATGGATACCAGCAA +
Preference number: 3 (lower is better)
Translates to: WFTGLKVSEGTTKFSLISEISHL*ANGYQQ
Trigger: TTGCTGGTATCCATTTGCCAACAAATGTGAAATTTC...GGAAATGAGGCTGAACTTTGTAGTGCCCTCGCTAACCTTCAGACCAGTAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR TCA 72 bp AACAACTGCAGCTTGTTTCCAGTGGGAGGCTTCACTTaGAGTATCCAACCTAATCTCTTCATCAAGGTACAT +
Preference number: 3 (lower is better)
Translates to: NNCSLFPVGGFT*SIQPNLFIKVH
Trigger: ATGTACCTTGATGAAGAGATTAGGTTGGATACTTCAAGTGAAGCCTCCCACTGGAAACAAGCTGCAGTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CAA 90 bp GCACATACTGAGGAAAGATCTTGCCTCCAGATTGTAGTAAACACCTGGATATTGAGTTCATACATGGTCTaGGATAACTCACAGGCATAC +
Preference number: 3 (lower is better)
Translates to: AHTEERSCLQIVVNTWILSSYMV*DNSQAY
Trigger: GTATGCCTGTGAGTTATCCAAGACCATGTATGAACT...CAATATCCAGGTGTTTACTACAATCTGGAGGCAAGATCTTTCCTCAGTATGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CAA 90 bp AATTTCACATTTGTTGGCAAATGGATACCAGCAATGTCCTTAATACCCACTCTAATCCCTGCTTCCATCTaGTTTGCTGCCACGACATCA +
Preference number: 3 (lower is better)
Translates to: NFTFVGKWIPAMSLIPTLIPASI*FAATTS
Trigger: TGATGTCGTGGCAGCAAACAAGATGGAAGCAGGGAT...TAGAGTGGGTATTAAGGACATTGCTGGTATCCATTTGCCAACAAATGTGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR TCA 72 bp TGTCTCAGCCAAAACTCAAGTGTTTCTTTAGGAAAGTaGTTGGCTTCAGATATGAGGTCCAGAGCAATACGA +
Preference number: 3 (lower is better)
Translates to: CLSQNSSVSLGK*LASDMRSRAIR
Trigger: TCGTATTGCTCTGGACCTCATATCTGAAGCCAATCACTTTCCTAAAGAAACACTTGAGTTTTGGCTGAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR GCA 72 bp AAGCATGATAAAGTGCCAGCGTTCCACCAACCAGTTTaGAACACGATAAAAATTCTCCTTTGCATCACTGAA +
Preference number: 3 (lower is better)
Translates to: KHDKVPAFHQPV*NTIKILLCITE
Trigger: TTCAGTGATGCAAAGGAGAATTTTTATCGTGTTGCAAACTGGTTGGTGGAACGCTGGCACTTTATCATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 72 bp TGGAATTTACAGGTAACCATAACCCTCAGTCTTCAGTaGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGG +
Preference number: 3 (lower is better)
Translates to: WNLQVTITLSLQ*KPFSVSQLQVW
Trigger: CCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGTTATGGTTACCTGTAAATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
3UTR CCA 72 bp ATGGGATTATCTAAAACAACTGCAGCTTGTTTCCAGTaGGAGGCTTCACTTGAAGTATCCAACCTAATCTCT +
Preference number: 3 (lower is better)
Translates to: MGLSKTTAACFQ*EASLEVSNLIS
Trigger: AGAGATTAGGTTGGATACTTCAAGTGAAGCCTCCCACTGGAAACAAGCTGCAGTTGTTTTAGATAATCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CAA 90 bp GCACATACTGAGGAAAGATCTTGCCTCCAGATTGTAGTAAACACCTGGATATTGGTTCCACCAACCAGTTaGCAACACGATAAAAATTCT +
Preference number: 3 (lower is better)
Translates to: AHTEERSCLQIVVNTWILVPPTS*QHDKNS
Trigger: AGAATTTTTATCGTGTTGCAAACTGGTTGGTGGAAC...CAATATCCAGGTGTTTACTACAATCTGGAGGCAAGATCTTTCCTCAGTATGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 72 bp AGAAGAATAAGCCGGACTCTGAAATTTCACATTTGTTaGCAAATGGATACCAGCAATGTCCTTAATACCCAC +
Preference number: 3 (lower is better)
Translates to: RRISRTLKFHIC*QMDTSNVLNTH
Trigger: GTGGGTATTAAGGACATTGCTGGTATCCATTTGCCAACAAATGTGAAATTTCAGAGTCCGGCTTATTCTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CAA 90 bp GGATTCTTAAGTAACAGTCTTGACAAGATACTTCCATCATCACATGGTCTCCAGTCTGAAATTTCACATTaGTTGGCAAATGGATACCAG +
Preference number: 3 (lower is better)
Translates to: GFLSNSLDKILPSSHGLQSEISH*LANGYQ
Trigger: CTGGTATCCATTTGCCAACAAATGTGAAATTTCAGA...CTGGAGACCATGTGATGATGGAAGTATCTTGTCAAGACTGTTACTTAAGAATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR GCA 72 bp AAATGTTCTTTTGCCAAAGTAGACCAAGAAAAATGCTaGCTCCTGAAGATGTATTCCCTAACTCCTTTACTG +
Preference number: 3 (lower is better)
Translates to: KCSFAKVDQEKC*LLKMYSLTPLL
Trigger: CAGTAAAGGAGTTAGGGAATACATCTTCAGGAGGCAGCATTTTTCTTGGTCTACTTTGGCAAAAGAACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322396.7
3UTR CCA 72 bp CTAGGACTTGTGGATAAACTATGTTCATCATCAAGCTaGAGCACAAACCAAACCATAATAGCATCTAGTATG +
Preference number: 3 (lower is better)
Translates to: LGLVDKLCSSSS*STNQTIIASSM
Trigger: CATACTAGATGCTATTATGGTTTGGTTTGTGCTCCAGCTTGATGATGAACATAGTTTATCCACAAGTCCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CAA 90 bp ATCAAGGTACATATGATACCAAAATGGAATAGCAGTCAGTCTTCCAGATTTACATTCGTATGTAAGAGTTaGATCCCTGCTTCCATCTTG +
Preference number: 3 (lower is better)
Translates to: IKVHMIPKWNSSQSSRFTFVCKS*IPASIL
Trigger: CAAGATGGAAGCAGGGATCAAACTCTTACATACGAA...TGTAAATCTGGAAGACTGACTGCTATTCCATTTTGGTATCATATGTACCTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CAA 90 bp TTTCACCTTTGGTCTTTGGCTGTAAAAGTAAATGCTCCCATGCATGAATCAAACTTTCGGGAATATGTTTaGGAATCTCTATGTCAAGTG +
Preference number: 3 (lower is better)
Translates to: FHLWSLAVKVNAPMHESNFREYV*ESLCQV
Trigger: CACTTGACATAGAGATTCCAAAACATATTCCCGAAA...GTTTGATTCATGCATGGGAGCATTTACTTTTACAGCCAAAGACCAAAGGTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CAA 90 bp GTGTTCAAATACGGAGTCATTAAATCTAGTCTTAAGAGTTCCACTGGCTTGCTTATTATGCTCCATAACTaGTCTGATTTTGGCCTTTGT +
Preference number: 3 (lower is better)
Translates to: VFKYGVIKSSLKSSTGLLIMLHN*SDFGLC
Trigger: ACAAAGGCCAAAATCAGACAAGTTATGGAGCATAAT...AAGCAAGCCAGTGGAACTCTTAAGACTAGATTTAATGACTCCGTATTTGAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR TCA 72 bp TTGGTCTTTGGCTGTAAAAGTAAATGCTCCCATGCATaGATCAAACTCTCCACAATTCCTTCTCCAAATAAA +
Preference number: 3 (lower is better)
Translates to: LVFGCKSKCSHA*IKLSTIPSPNK
Trigger: TTTATTTGGAGAAGGAATTGTGGAGAGTTTGATTCATGCATGGGAGCATTTACTTTTACAGCCAAAGACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR TCA 72 bp GAAGTATCCAACCTAATCTCTTCATCAAGGTACATATaGTACCAAAATGGAATAGCAGTCAGTCTTCCAGAT +
Preference number: 3 (lower is better)
Translates to: EVSNLISSSRYI*YQNGIAVSLPD
Trigger: ATCTGGAAGACTGACTGCTATTCCATTTTGGTATCATATGTACCTTGATGAAGAGATTAGGTTGGATACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR-3UTR CAA 90 bp AATTTCACATTTGTTGGCAAATGGATACCAGCAATGTCCTTAATACCCACTCTATTTCACCTTTGGTCTTaGGCTGTAAAAGTAAATGCT +
Preference number: 3 (lower is better)
Translates to: NFTFVGKWIPAMSLIPTLFHLWS*AVKVNA
Trigger: AGCATTTACTTTTACAGCCAAAGACCAAAGGTGAAA...TAGAGTGGGTATTAAGGACATTGCTGGTATCCATTTGCCAACAAATGTGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
3UTR CCA 72 bp CCTAATCTCTTCATCAAGGTACATATGATACCAAAATaGAATAGCAGTCAGTCTTCCAGATTTACAAACGTA +
Preference number: 3 (lower is better)
Translates to: PNLFIKVHMIPK*NSSQSSRFTNV
Trigger: TACGTTTGTAAATCTGGAAGACTGACTGCTATTCCATTTTGGTATCATATGTACCTTGATGAAGAGATTAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR TCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTACCCTCCGCCGCGGGTaGACTCGCCAACCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWITLRRG*TRQPQP
Trigger: GGGCTGGGGTTGGCGAGTTCACCCGCGGCGGAGGGT...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR TCA 90 bp CTGAGTACAAGTTCCTCTCCCATTTCAACCTGGATGGGATTATCTAAAACAACTGCTCCGGCGCCAGGCTaGGCACGAGGAGGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: LSTSSSPISTWMGLSKTTAPAPG*ARGGSG
Trigger: CCCACTACCTCCTCGTGCTCAGCCTGGCGCCGGAGC...AGTTGTTTTAGATAATCCCATCCAGGTTGAAATGGGAGAGGAACTTGTACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR TCA 90 bp TCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTAAGGCTCCGGCGCCAGGCTaGGCACGAGGAGGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: SVFSGSLSVFPNYKFGFKAPAPG*ARGGSG
Trigger: CCCACTACCTCCTCGTGCTCAGCCTGGCGCCGGAGC...CTTAAATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CCA 90 bp GGATTCTTAAGTAACAGTCTTGACAAGATACTTCCATCATCACATGGTCTCCAGCGTCTCGGCGGGACCTaGGCCGCGAGTTCGACATGG +
Preference number: 4 (lower is better)
Translates to: GFLSNSLDKILPSSHGLQRLGGT*AASSTW
Trigger: CCATGTCGAACTCGCGGCCCAGGTCCCGCCGAGACG...CTGGAGACCATGTGATGATGGAAGTATCTTGTCAAGACTGTTACTTAAGAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTCAGTGCTCTGCGCTCTaGAAGGACCGCGACACCAGC +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWIQCSAL*KDRDTS
Trigger: GCTGGTGTCGCGGTCCTTGCAGAGCGCAGAGCACTG...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
3UTR CAA 72 bp GCTGCCACGACATCACAGGCAAGTTCATACATGGTCTaGGATAACTCACAGGCATACACGGAATGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: AATTSQASSYMV*DNSQAYTECAP
Trigger: TGGAGCACATTCCGTGTATGCCTGTGAGTTATCCAAGACCATGTATGAACTTGCCTGTGATGTCGTGGCAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp TCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTAAGGCCCAGACAGTGCTCTaGGCTCTGCAAGGACCGCGA +
Preference number: 4 (lower is better)
Translates to: SVFSGSLSVFPNYKFGFKAQTVL*ALQGPR
Trigger: TCGCGGTCCTTGCAGAGCGCAGAGCACTGTCTGGGC...CTTAAATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CCA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTCGTCTCGGCGGGACCTaGGCCGCGAGTTCGACATGG +
Preference number: 4 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSRLGGT*AASSTW
Trigger: CCATGTCGAACTCGCGGCCCAGGTCCCGCCGAGACG...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS-3UTR TCA 90 bp GCTCATCTCATTCTGACAGTGAGTATCCATGGTCTGATACAGTTTCTCTGGAGTTCTGGTTTACTGGTCTaGAGGTTAGCGAGGGCACTA +
Preference number: 4 (lower is better)
Translates to: AHLILTVSIHGLIQFLWSSGLLV*RLARAL
Trigger: TAGTGCCCTCGCTAACCTTCAGACCAGTAAACCAGA...ACTCCAGAGAAACTGTATCAGACCATGGATACTCACTGTCAGAATGAGATGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp CAAAGTTCAGCCTCATTTCCTAACGATAACAAGTCTTTATTCTGGGTAAAACTTCAGTGCTCTGCGCTCTaGAAGGACCGCGACACCAGC +
Preference number: 4 (lower is better)
Translates to: QSSASFPNDNKSLFWVKLQCSAL*KDRDTS
Trigger: GCTGGTGTCGCGGTCCTTGCAGAGCGCAGAGCACTG...AAGTTTTACCCAGAATAAAGACTTGTTATCGTTAGGAAATGAGGCTGAACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGTGGACGCCCAGACAGTaGTCTGCGCTCTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQWTPRQ*SALCKD
Trigger: GTCCTTGCAGAGCGCAGAGCACTGTCTGGGCGTCCA...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR GCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGAGTGGGCATAGGCAGTaGCGAAGTCCTGGACGCCCA +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQSGHRQ*RSPGRP
Trigger: TGGGCGTCCAGGACTTCGGCACTGCCTATGCCCACT...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR GCA 90 bp TGGTTTACTGGTCTGAAGGTTAGCGAGGGCACTACAAAGTTCAGCCTCATTTCCAGAGTTCCACTGGCTTaGTTAAAGGTATACAGGGCA +
Preference number: 4 (lower is better)
Translates to: WFTGLKVSEGTTKFSLISRVPLA*LKVYRA
Trigger: TGCCCTGTATACCTTTAAGCAAGCCAGTGGAACTCT...GGAAATGAGGCTGAACTTTGTAGTGCCCTCGCTAACCTTCAGACCAGTAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR TCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTCTGGTTTACTGGTCTaGAGGTTAGCGAGGGCACTA +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWISGLLV*RLARAL
Trigger: TAGTGCCCTCGCTAACCTTCAGACCAGTAAACCAGA...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR GCA 90 bp GTACTTGTTGATGCTCTATTTACACAGTTTTCATTGGAAAACTGCTCTTCATTGTGGACGCCCAGACAGTaGTCTGCGCTCTGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: VLVDALFTQFSLENCSSLWTPRQ*SALCKD
Trigger: GTCCTTGCAGAGCGCAGAGCACTGTCTGGGCGTCCA...CAATGAAGAGCAGTTTTCCAATGAAAACTGTGTAAATAGAGCATCAACAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp TACTTTTCACAATTAGCACTTTCACCTTTGGTCTTTGGCTGTAAAAGTAAATGCAGTGGGCATAGGCAGTaGCGAAGTCCTGGACGCCCA +
Preference number: 4 (lower is better)
Translates to: YFSQLALSPLVFGCKSKCSGHRQ*RSPGRP
Trigger: TGGGCGTCCAGGACTTCGGCACTGCCTATGCCCACT...GCATTTACTTTTACAGCCAAAGACCAAAGGTGAAAGTGCTAATTGTGAAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTGCTTCCATCTTGTTTaGTGCCACGACATCACAGGC +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWICFHLV*CHDITG
Trigger: GCCTGTGATGTCGTGGCAGCAAACAAGATGGAAGCA...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CCA 90 bp TTTCACCTTTGGTCTTTGGCTGTAAAAGTAAATGCTCCCATGCATGAATCAAACGCCGCGAGTTCGACATaGCAGTCACCACTTGTATGG +
Preference number: 4 (lower is better)
Translates to: FHLWSLAVKVNAPMHESNAASST*QSPLVW
Trigger: CCATACAAGTGGTGACTGCCATGTCGAACTCGCGGC...GTTTGATTCATGCATGGGAGCATTTACTTTTACAGCCAAAGACCAAAGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CCA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTGCAGTGCCGAAGTCCTaGACGCCCAGACAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSAVPKS*TPRQCS
Trigger: AGAGCACTGTCTGGGCGTCCAGGACTTCGGCACTGC...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS-3UTR TCA 90 bp AGCCTTCGGACACATCTAACACGTAGAAAGGTTCAAGGATGTTCTGTACAGTATTCCATTATTTCCTGCTaGATGAGCCCAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: SLRTHLTRRKVQGCSVQYSIISC*MSPDGS
Trigger: TGAGCCATCTGGGCTCATTCAGCAGGAAATAATGGA...ATACTGTACAGAACATCCTTGAACCTTTCTACGTGTTAGATGTGTCCGAAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR TCA 90 bp GCACATACTGAGGAAAGATCTTGCCTCCAGATTGTAGTAAACACCTGGATATTGTGTGATGCTGAATGCTaGGTACAAGTTCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: AHTEERSCLQIVVNTWILCDAEC*VQVPLP
Trigger: TGGGAGAGGAACTTGTACTCAGCATTCAGCATCACA...CAATATCCAGGTGTTTACTACAATCTGGAGGCAAGATCTTTCCTCAGTATGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTTCCATCTTGTTTGCTaGCACGACATCACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWIFHLVC*HDITGK
Trigger: CTTGCCTGTGATGTCGTGGCAGCAAACAAGATGGAA...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR GCA 90 bp AGATTCCAATATACATGTCTGCTCTACAGCATCTGGTTTACTGGTCTGAAGGTTTGCTTCCATCTTGTTTaGTGCCACGACATCACAGGC +
Preference number: 4 (lower is better)
Translates to: RFQYTCLLYSIWFTGLKVCFHLV*CHDITG
Trigger: GCCTGTGATGTCGTGGCAGCAAACAAGATGGAAGCA...AACCTTCAGACCAGTAAACCAGATGCTGTAGAGCAGACATGTATATTGGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp GCACATACTGAGGAAAGATCTTGCCTCCAGATTGTAGTAAACACCTGGATATTGCTTTATCCAGTAGTCTaGAAGGTCCTGTACGGGGTA +
Preference number: 4 (lower is better)
Translates to: AHTEERSCLQIVVNTWILLYPVV*KVLYGV
Trigger: TACCCCGTACAGGACCTTGCAGACTACTGGATAAAG...CAATATCCAGGTGTTTACTACAATCTGGAGGCAAGATCTTTCCTCAGTATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CCA 90 bp GCTCATCTCATTCTGACAGTGAGTATCCATGGTCTGATACAGTTTCTCTGGAGTACTTCCATCATCACATaGTCTCCAGGCTTTATCCAG +
Preference number: 4 (lower is better)
Translates to: AHLILTVSIHGLIQFLWSTSIIT*SPGFIQ
Trigger: CTGGATAAAGCCTGGAGACCATGTGATGATGGAAGT...ACTCCAGAGAAACTGTATCAGACCATGGATACTCACTGTCAGAATGAGATGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTGCAGCTTGTTTCCAGTaGGAGGCTTCACTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWIAACFQ*EASLEV
Trigger: TACTTCAAGTGAAGCCTCCCACTGGAAACAAGCTGC...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR TCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTGATTGGCTTCAGATATaGGGTCCAGAGCAATACGAT +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWIDWLQI*GPEQYD
Trigger: ATCGTATTGCTCTGGACCTCATATCTGAAGCCAATC...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR TCA 90 bp AAACCTGCATCGACAGTTTCTGTTACAACTAGGGACACTCTTTCGGGAATATGTGATTGGCTTCAGATATaGGGTCCAGAGCAATACGAT +
Preference number: 4 (lower is better)
Translates to: KPASTVSVTTRDTLSGICDWLQI*GPEQYD
Trigger: ATCGTATTGCTCTGGACCTCATATCTGAAGCCAATC...ACATATTCCCGAAAGAGTGTCCCTAGTTGTAACAGAAACTGTCGATGCAGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR TCA 90 bp GGATTCTTAAGTAACAGTCTTGACAAGATACTTCCATCATCACATGGTCTCCAGGTGGGAGGCTTCACTTaGAGTATCCAACCTAATCTC +
Preference number: 4 (lower is better)
Translates to: GFLSNSLDKILPSSHGLQVGGFT*SIQPNL
Trigger: GAGATTAGGTTGGATACTTCAAGTGAAGCCTCCCAC...CTGGAGACCATGTGATGATGGAAGTATCTTGTCAAGACTGTTACTTAAGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp AAGTGTTTCTTTAGGAAAGTGATTGGCTTCAGATATGAGGTCCAGAGCAATACGAGAAAACTCTCTCGATaGTACACTTCCAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: KCFFRKVIGFRYEVQSNTRKLSR*YTSRDQ
Trigger: CTGGTCCCTGGAAGTGTAGCATCGAGAGAGTTTTCT...CGTATTGCTCTGGACCTCATATCTGAAGCCAATCACTTTCCTAAAGAAACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp AGCCTTCGGACACATCTAACACGTAGAAAGGTTCAAGGATGTTCTGTACAGTATGGACCCCAAACAAACTaGCTTTTGGATTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: SLRTHLTRRKVQGCSVQYGPQTN*LLDCCI
Trigger: AATGCAGCAATCCAAAAGGCAGTTTGTTTGGGGTCC...ATACTGTACAGAACATCCTTGAACCTTTCTACGTGTTAGATGTGTCCGAAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CCA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTGCCGCGAGTTCGACATaGCAGTCACCACTTGTATGG +
Preference number: 4 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSAASST*QSPLVW
Trigger: CCATACAAGTGGTGACTGCCATGTCGAACTCGCGGC...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS-3UTR CCA 90 bp CTGAGTACAAGTTCCTCTCCCATTTCAACCTGGATGGGATTATCTAAAACAACTGCAGCTTGTTTCCAGTaGGAGGCTTCACTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: LSTSSSPISTWMGLSKTTAACFQ*EASLEV
Trigger: TACTTCAAGTGAAGCCTCCCACTGGAAACAAGCTGC...AGTTGTTTTAGATAATCCCATCCAGGTTGAAATGGGAGAGGAACTTGTACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR TCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTCTGAAAAGTGTGTACTaGAAAGTTTCCTTCACGTCG +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWILKSVY*KVSFTS
Trigger: CGACGTGAAGGAAACTTTTCAGTACACACTTTTCAG...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR TCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTCTCCTTTGCATCACTaGAATCAGGGTTTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWISPLHH*NQGLAS
Trigger: TGAAGCTAAACCCTGATTTCAGTGATGCAAAGGAGA...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR TCA 90 bp GCTCATCTCATTCTGACAGTGAGTATCCATGGTCTGATACAGTTTCTCTGGAGTGTTTCTTTAGGAAAGTaGTTGGCTTCAGATATGAGG +
Preference number: 4 (lower is better)
Translates to: AHLILTVSIHGLIQFLWSVSLGK*LASDMR
Trigger: CCTCATATCTGAAGCCAATCACTTTCCTAAAGAAAC...ACTCCAGAGAAACTGTATCAGACCATGGATACTCACTGTCAGAATGAGATGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTGCTCCCCCATACTATTaGAAATCACTTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWIAPPYY*KSLHHQ
Trigger: CTGATGATGAAGTGATTTGCAATAGTATGGGGGAGC...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR GCA 90 bp AGCCTTCGGACACATCTAACACGTAGAAAGGTTCAAGGATGTTCTGTACAGTATATGTCTTCTTATCTCTaGACATTCTACTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: SLRTHLTRRKVQGCSVQYMSSYL*TFYCHP
Trigger: GGGATGGCAGTAGAATGTGCAGAGATAAGAAGACAT...ATACTGTACAGAACATCCTTGAACCTTTCTACGTGTTAGATGTGTCCGAAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp CTGAGTACAAGTTCCTCTCCCATTTCAACCTGGATGGGATTATCTAAAACAACTTCCAGAGCAATACGATaGTGGTCTTTCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: LSTSSSPISTWMGLSKTTSRAIR*WSFSTE
Trigger: TTCTGTGGAGAAAGACCAGCATCGTATTGCTCTGGA...AGTTGTTTTAGATAATCCCATCCAGGTTGAAATGGGAGAGGAACTTGTACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTAGGCAAGTTCATACATaGTCTTGGATAACTCACAGG +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWIRQVHT*SWITHR
Trigger: CCTGTGAGTTATCCAAGACCATGTATGAACTTGCCT...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CCA 90 bp AAACCTGCATCGACAGTTTCTGTTACAACTAGGGACACTCTTTCGGGAATATGTAGGCAAGTTCATACATaGTCTTGGATAACTCACAGG +
Preference number: 4 (lower is better)
Translates to: KPASTVSVTTRDTLSGICRQVHT*SWITHR
Trigger: CCTGTGAGTTATCCAAGACCATGTATGAACTTGCCT...ACATATTCCCGAAAGAGTGTCCCTAGTTGTAACAGAAACTGTCGATGCAGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CCA 90 bp TGGTTTACTGGTCTGAAGGTTAGCGAGGGCACTACAAAGTTCAGCCTCATTTCCATTGTAGTAAACACCTaGATATTGCAGCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: WFTGLKVSEGTTKFSLISIVVNT*ILQLFP
Trigger: TGGAAAAAGCTGCAATATCCAGGTGTTTACTACAAT...GGAAATGAGGCTGAACTTTGTAGTGCCCTCGCTAACCTTCAGACCAGTAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CCA 90 bp ACCTGGATGGGATTATCTAAAACAACTGCAGCTTGTTTCCAGTGGGAGGCTTCACATATGATACCAAAATaGAATAGCAGTCAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TWMGLSKTTAACFQWEASHMIPK*NSSQSS
Trigger: GGAAGACTGACTGCTATTCCATTTTGGTATCATATG...TGAAGCCTCCCACTGGAAACAAGCTGCAGTTGTTTTAGATAATCCCATCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR TCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGAGTCTTGTATCCGACTaGGAGCATCAAGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQSLVSD*EHQALQ
Trigger: CTGAAGAGCTTGATGCTCTCAGTCGGATACAAGACT...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR TCA 90 bp AGATTCCAATATACATGTCTGCTCTACAGCATCTGGTTTACTGGTCTGAAGGTTAGCTTCACTGCTTTATaGAAATACCCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RFQYTCLLYSIWFTGLKVSFTAL*KYPAAS
Trigger: TGAAGCAGCTGGGTATTTTCATAAAGCAGTGAAGCT...AACCTTCAGACCAGTAAACCAGATGCTGTAGAGCAGACATGTATATTGGAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR TCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTAAATGCTCCCATGCATaGATCAAACTCTCCACAATT +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWIKCSHA*IKLSTI
Trigger: AATTGTGGAGAGTTTGATTCATGCATGGGAGCATTT...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR TCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGTCCATTATTTCCTGCTaGATGAGCCCAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQSIISC*MSPDGS
Trigger: TGAGCCATCTGGGCTCATTCAGCAGGAAATAATGGA...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR TCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGGTGGGAGGCTTCACTTaGAGTATCCAACCTAATCTC +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQVGGFT*SIQPNL
Trigger: GAGATTAGGTTGGATACTTCAAGTGAAGCCTCCCAC...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR TCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGTGTGATGCTGAATGCTaGGTACAAGTTCCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQCDAEC*VQVPLP
Trigger: TGGGAGAGGAACTTGTACTCAGCATTCAGCATCACA...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR GCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGAGAAAACTCTCTCGATaGTACACTTCCAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQRKLSR*YTSRDQ
Trigger: CTGGTCCCTGGAAGTGTAGCATCGAGAGAGTTTTCT...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR GCA 90 bp AGATTCCAATATACATGTCTGCTCTACAGCATCTGGTTTACTGGTCTGAAGGTTATGAAAATACCCAGCTaGTTCATCCCTAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: RFQYTCLLYSIWFTGLKVMKIPS*FIPKAH
Trigger: ATGGGCTTTAGGGATGAAGCAGCTGGGTATTTTCAT...AACCTTCAGACCAGTAAACCAGATGCTGTAGAGCAGACATGTATATTGGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp TCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTAAGTTAAGCATGATAAAGTaGCAGCGTTCCACCAACCAG +
Preference number: 4 (lower is better)
Translates to: SVFSGSLSVFPNYKFGFKLSMIK*QRSTNQ
Trigger: CTGGTTGGTGGAACGCTGGCACTTTATCATGCTTAA...CTTAAATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTGTTCATACATGGTCTTaGATAACTCACAGGCATACA +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWIVHTWS*ITHRHT
Trigger: TGTATGCCTGTGAGTTATCCAAGACCATGTATGAAC...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR TCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGGCTCTTCAGCCCATCTaGAAAGTGTGTACTGAAAAG +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQALQPI*KVCTEK
Trigger: CTTTTCAGTACACACTTTTCAGATGGGCTGAAGAGC...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR TCA 90 bp TCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTAAGAGCTTCACTGCTTTATaGAAATACCCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SVFSGSLSVFPNYKFGFKSFTAL*KYPAAS
Trigger: TGAAGCAGCTGGGTATTTTCATAAAGCAGTGAAGCT...CTTAAATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR TCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTACACGTATAGGTACCTaGAACTGGTTAATAAAAGGT +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWITRIGT*NWLIKG
Trigger: ACCTTTTATTAACCAGTTTCAGGTACCTATACGTGT...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR GCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGGGACCCCAAACAAACTaGCTTTTGGATTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQGPQTN*LLDCCI
Trigger: AATGCAGCAATCCAAAAGGCAGTTTGTTTGGGGTCC...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR GCA 90 bp ATATGTTTTGGAATCTCTATGTCAAGTGACTTCGTATGTAAGAGTTTGATCCCTTTCCATCTTGTTTGCTaGCACGACATCACAGGCAAG +
Preference number: 4 (lower is better)
Translates to: ICFGISMSSDFVCKSLIPFHLVC*HDITGK
Trigger: CTTGCCTGTGATGTCGTGGCAGCAAACAAGATGGAA...AGGGATCAAACTCTTACATACGAAGTCACTTGACATAGAGATTCCAAAACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp TCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTAAGATGTCTTCTTATCTCTaGACATTCTACTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: SVFSGSLSVFPNYKFGFKMSSYL*TFYCHP
Trigger: GGGATGGCAGTAGAATGTGCAGAGATAAGAAGACAT...CTTAAATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR GCA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTCTTTATCCAGTAGTCTaGAAGGTCCTGTACGGGGTA +
Preference number: 4 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSLYPVV*KVLYGV
Trigger: TACCCCGTACAGGACCTTGCAGACTACTGGATAAAG...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS-3UTR GCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGTCCAGAGCAATACGATaGTGGTCTTTCTCCACAGAA +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQSRAIR*WSFSTE
Trigger: TTCTGTGGAGAAAGACCAGCATCGTATTGCTCTGGA...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR GCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGAGAGTTCCACTGGCTTaGTTAAAGGTATACAGGGCA +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQRVPLA*LKVYRA
Trigger: TGCCCTGTATACCTTTAAGCAAGCCAGTGGAACTCT...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTACATTTGTTGGCAAATaGATACCAGCAATGTCCTTA +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWITFVGK*IPAMSL
Trigger: TAAGGACATTGCTGGTATCCATTTGCCAACAAATGT...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CCA 90 bp CTTAATACCCACTCTATGATGTCTTCTTATCTCTGCACATTCTACTGCCATCCCACATTTGTTGGCAAATaGATACCAGCAATGTCCTTA +
Preference number: 4 (lower is better)
Translates to: LNTHSMMSSYLCTFYCHPTFVGK*IPAMSL
Trigger: TAAGGACATTGCTGGTATCCATTTGCCAACAAATGT...GGGATGGCAGTAGAATGTGCAGAGATAAGAAGACATCATAGAGTGGGTATTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGACTTCCATCATCACATaGTCTCCAGGCTTTATCCAG +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQTSIIT*SPGFIQ
Trigger: CTGGATAAAGCCTGGAGACCATGTGATGATGGAAGT...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CCA 90 bp GTGTTCAAATACGGAGTCATTAAATCTAGTCTTAAGAGTTCCACTGGCTTGCTTGACAGTGAGTATCCATaGTCTGATACAGTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VFKYGVIKSSLKSSTGLLDSEYP*SDTVSL
Trigger: CAGAGAAACTGTATCAGACCATGGATACTCACTGTC...AAGCAAGCCAGTGGAACTCTTAAGACTAGATTTAATGACTCCGTATTTGAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CCA 90 bp TCAAATACGGAGTCATTAAATCTAGTCTTAAGAGTTCCACTGGCTTGCTTAAAGCTCCACAGAACTGTATaGTTTAACCTGCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: SNTESLNLVLRVPLACLKLHRTV*FNLPKC
Trigger: ACACTTGGGCAGGTTAAACCATACAGTTCTGTGGAG...CTTTAAGCAAGCCAGTGGAACTCTTAAGACTAGATTTAATGACTCCGTATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGAGAGCAATACGATGCTaGTCTTTCTCCACAGAACTG +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQRAIRC*SFSTEL
Trigger: CAGTTCTGTGGAGAAAGACCAGCATCGTATTGCTCT...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CCA 90 bp CTTAATACCCACTCTATGATGTCTTCTTATCTCTGCACATTCTACTGCCATCCCCCATTTCAACCTGGATaGGATTATCTAAAACAACTG +
Preference number: 4 (lower is better)
Translates to: LNTHSMMSSYLCTFYCHPPFQPG*DYLKQL
Trigger: CAGTTGTTTTAGATAATCCCATCCAGGTTGAAATGG...GGGATGGCAGTAGAATGTGCAGAGATAAGAAGACATCATAGAGTGGGTATTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR TCA 90 bp AATTTCACATTTGTTGGCAAATGGATACCAGCAATGTCCTTAATACCCACTCTATCTCCTTTGCATCACTaGAATCAGGGTTTAGCTTCA +
Preference number: 4 (lower is better)
Translates to: NFTFVGKWIPAMSLIPTLSPLHH*NQGLAS
Trigger: TGAAGCTAAACCCTGATTTCAGTGATGCAAAGGAGA...TAGAGTGGGTATTAAGGACATTGCTGGTATCCATTTGCCAACAAATGTGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR GCA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTCCCATTCTGAAGAGATaGTCCCCCATACTATTGCAA +
Preference number: 4 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSPILKR*SPILLQ
Trigger: TTGCAATAGTATGGGGGAGCATCTCTTCAGAATGGG...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR GCA 90 bp GTACTTGTTGATGCTCTATTTACACAGTTTTCATTGGAAAACTGCTCTTCATTGTTAAGCATGATAAAGTaGCAGCGTTCCACCAACCAG +
Preference number: 4 (lower is better)
Translates to: VLVDALFTQFSLENCSSLLSMIK*QRSTNQ
Trigger: CTGGTTGGTGGAACGCTGGCACTTTATCATGCTTAA...CAATGAAGAGCAGTTTTCCAATGAAAACTGTGTAAATAGAGCATCAACAAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CCA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTATAACAGCACTTGCTaGTATAACTTTCCCATACTT +
Preference number: 4 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWIYNSTC*YNFPIL
Trigger: AAGTATGGGAAAGTTATACCAGCAAGTGCTGTTATA...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CCA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTCTCCACAGAACTGTATaGTTTAACCTGCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSLHRTV*FNLPKC
Trigger: ACACTTGGGCAGGTTAAACCATACAGTTCTGTGGAG...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS-3UTR TCA 90 bp GTGTTCAAATACGGAGTCATTAAATCTAGTCTTAAGAGTTCCACTGGCTTGCTTTTAATACCCACTCTATaGTGTCTTCTTATCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VFKYGVIKSSLKSSTGLLLIPTL*CLLISA
Trigger: TGCAGAGATAAGAAGACATCATAGAGTGGGTATTAA...AAGCAAGCCAGTGGAACTCTTAAGACTAGATTTAATGACTCCGTATTTGAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR TCA 90 bp TCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTAAGTCTCAAAACAAAACCTaGGATGTTTCAGATGTACAC +
Preference number: 4 (lower is better)
Translates to: SVFSGSLSVFPNYKFGFKSQNKT*DVSDVH
Trigger: GTGTACATCTGAAACATCTCAGGTTTTGTTTTGAGA...CTTAAATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR GCA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTATGAAAATACCCAGCTaGTTCATCCCTAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSMKIPS*FIPKAH
Trigger: ATGGGCTTTAGGGATGAAGCAGCTGGGTATTTTCAT...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS-3UTR CCA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTGACAGTGAGTATCCATaGTCTGATACAGTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSDSEYP*SDTVSL
Trigger: CAGAGAAACTGTATCAGACCATGGATACTCACTGTC...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS-3UTR CCA 90 bp TCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTAAGCCATTTCAACCTGGATaGGATTATCTAAAACAACTG +
Preference number: 4 (lower is better)
Translates to: SVFSGSLSVFPNYKFGFKPFQPG*DYLKQL
Trigger: CAGTTGTTTTAGATAATCCCATCCAGGTTGAAATGG...CTTAAATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322396.7
3UTR CAA 72 bp CCAAATATCCTCCAGGAACTCGACTCATCTTTTCAGTaGTATAAGGTTCAATTGTTTCTTCAGTATCTACAG +
Preference number: 4 (lower is better)
Translates to: PNILQELDSSFQ*YKVQLFLQYLQ
Trigger: CTGTAGATACTGAAGAAACAATTGAACCTTATACAACTGAAAAGATGAGTCGAGTTCCTGGAGGATATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR TCA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTGTTTCTTTAGGAAAGTaGTTGGCTTCAGATATGAGG +
Preference number: 4 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSVSLGK*LASDMR
Trigger: CCTCATATCTGAAGCCAATCACTTTCCTAAAGAAAC...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS-3UTR CCA 90 bp GTACTTGTTGATGCTCTATTTACACAGTTTTCATTGGAAAACTGCTCTTCATTGGTTCATACATGGTCTTaGATAACTCACAGGCATACA +
Preference number: 4 (lower is better)
Translates to: VLVDALFTQFSLENCSSLVHTWS*ITHRHT
Trigger: TGTATGCCTGTGAGTTATCCAAGACCATGTATGAAC...CAATGAAGAGCAGTTTTCCAATGAAAACTGTGTAAATAGAGCATCAACAAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGAAAGCCTTCATGATATaGGATGTTGTTAAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQKAFMI*DVVKQS
Trigger: GCTTTGCTTAACAACATCCCATATCATGAAGGCTTT...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CCA 90 bp TCAAATACGGAGTCATTAAATCTAGTCTTAAGAGTTCCACTGGCTTGCTTAAAGTCTCCCATTTCAACCTaGATGGGATTATCTAAAACA +
Preference number: 4 (lower is better)
Translates to: SNTESLNLVLRVPLACLKSPIST*MGLSKT
Trigger: TGTTTTAGATAATCCCATCCAGGTTGAAATGGGAGA...CTTTAAGCAAGCCAGTGGAACTCTTAAGACTAGATTTAATGACTCCGTATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR TCA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTTTAATACCCACTCTATaGTGTCTTCTTATCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSLIPTL*CLLISA
Trigger: TGCAGAGATAAGAAGACATCATAGAGTGGGTATTAA...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS-3UTR CCA 90 bp ATCAAGGTACATATGATACCAAAATGGAATAGCAGTCAGTCTTCCAGATTTACAAAAGCCTTCATGATATaGGATGTTGTTAAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: IKVHMIPKWNSSQSSRFTKAFMI*DVVKQS
Trigger: GCTTTGCTTAACAACATCCCATATCATGAAGGCTTT...TGTAAATCTGGAAGACTGACTGCTATTCCATTTTGGTATCATATGTACCTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CCA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGATTGTAGTAAACACCTaGATATTGCAGCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQIVVNT*ILQLFP
Trigger: TGGAAAAAGCTGCAATATCCAGGTGTTTACTACAAT...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CCA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTCATATGATACCAAAATaGAATAGCAGTCAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSHMIPK*NSSQSS
Trigger: GGAAGACTGACTGCTATTCCATTTTGGTATCATATG...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS-3UTR CCA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTTCTCCCATTTCAACCTaGATGGGATTATCTAAAACA +
Preference number: 4 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSSPIST*MGLSKT
Trigger: TGTTTTAGATAATCCCATCCAGGTTGAAATGGGAGA...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
3UTR CAA 72 bp GGCTCAATGACATCCAATATAATTATGCTCCATAACTaGTCTGATTTTGGCCTTTGTAACATAGCAGATTCA +
Preference number: 4 (lower is better)
Translates to: GSMTSNIIMLHN*SDFGLCNIADS
Trigger: TGAATCTGCTATGTTACAAAGGCCAAAATCAGACAAGTTATGGAGCATAATTATATTGGATGTCATTGAGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CCA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTTATAACAGCACTTGCTaGTATAACTTTCCCATACTT +
Preference number: 4 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSYNSTC*YNFPIL
Trigger: AAGTATGGGAAAGTTATACCAGCAAGTGCTGTTATA...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS GCA 90 bp CTCTGCGCTCTGCAAGGACCGCGACACCAGCTCGTCCCGGCCGGCTaGCCCAGCGCCACCCCCGGCGTCTCGGCGGGACCTGGGCCGCGA +
Preference number: 5 (lower is better)
Translates to: LCALQGPRHQLVPAG*PSATPGVSAGPGPR
Trigger: TCGCGGCCCAGGTCCCGCCGAGACGCCGGGGGTGGCGCTGGGGCAGCCGGCCGGGACGAGCTGGTGTCGCGGTCCTTGCAGAGCGCAGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS GCA 90 bp GTGGGCATAGGCAGTGCCGAAGTCCTGGACGCCCAGACAGTGCTCTaGGCTCTGCAAGGACCGCGACACCAGCTCGTCCCGGCCGGCTGC +
Preference number: 5 (lower is better)
Translates to: VGIGSAEVLDAQTVL*ALQGPRHQLVPAGC
Trigger: GCAGCCGGCCGGGACGAGCTGGTGTCGCGGTCCTTGCAGAGCGCAGAGCACTGTCTGGGCGTCCAGGACTTCGGCACTGCCTATGCCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS TCA 90 bp CCTAAAGCCCATTCTTCACGTCGTGTTTCAGCTCCGGCGCCAGGCTaGGCACGAGGAGGTAGTGGGCATAGGCAGTGCCGAAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: PKAHSSRRVSAPAPG*ARGGSGHRQCRSPG
Trigger: TCCAGGACTTCGGCACTGCCTATGCCCACTACCTCCTCGTGCTCAGCCTGGCGCCGGAGCTGAAACACGACGTGAAGAATGGGCTTTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS CCA 90 bp CGCCACCCCCGGCGTCTCGGCGGGACCTGGGCCGCGAGTTCGACATaGCAGTCACCACTTGTATGGCCAAAGGGAAGATATTTTGTAAAC +
Preference number: 5 (lower is better)
Translates to: RHPRRLGGTWAASST*QSPLVWPKGRYFVN
Trigger: GTTTACAAAATATCTTCCCTTTGGCCATACAAGTGGTGACTGCCATGTCGAACTCGCGGCCCAGGTCCCGCCGAGACGCCGGGGGTGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS TCA 90 bp ACTGAAAAGTTTCCTTCACGTCGTGTTTCAGCTCCGGCGCCAGGCTaGGCACGAGGAGGTAGTGGGCATAGGCAGTGCCGAAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: TEKFPSRRVSAPAPG*ARGGSGHRQCRSPG
Trigger: TCCAGGACTTCGGCACTGCCTATGCCCACTACCTCCTCGTGCTCAGCCTGGCGCCGGAGCTGAAACACGACGTGAAGGAAACTTTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CAA 90 bp AGCCTTCGGACACATCTAACACGTAGAAAGGTTCAAGGATGTTCTGTACAGTATCATGGCAGTCACCACTaGTATGGCCAAAGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: SLRTHLTRRKVQGCSVQYHGSHH*YGQRED
Trigger: ATCTTCCCTTTGGCCATACAAGTGGTGACTGCCATG...ATACTGTACAGAACATCCTTGAACCTTTCTACGTGTTAGATGTGTCCGAAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CAA 90 bp TGGTTTACTGGTCTGAAGGTTAGCGAGGGCACTACAAAGTTCAGCCTCATTTCCGAAAACTGCTCTTCATaGCTTTACTGTGATGCTGAC +
Preference number: 5 (lower is better)
Translates to: WFTGLKVSEGTTKFSLISENCSS*LYCDAD
Trigger: GTCAGCATCACAGTAAAGCAATGAAGAGCAGTTTTC...GGAAATGAGGCTGAACTTTGTAGTGCCCTCGCTAACCTTCAGACCAGTAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CAA 90 bp TCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTAAGCTGCTTCCATCTTGTTaGCTGCCACGACATCACAGG +
Preference number: 5 (lower is better)
Translates to: SVFSGSLSVFPNYKFGFKLLPSC*LPRHHR
Trigger: CCTGTGATGTCGTGGCAGCAAACAAGATGGAAGCAG...CTTAAATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS TCA 90 bp TTCTCCTTTGCATCACTGAAATCAGGGTTTAGCTTCACTGCTTTATaGAAATACCCAGCTGCTTCATCCCTAAAGCCCATTCTTCACGTC +
Preference number: 5 (lower is better)
Translates to: FSFASLKSGFSFTAL*KYPAASSLKPILHV
Trigger: GACGTGAAGAATGGGCTTTAGGGATGAAGCAGCTGGGTATTTTCATAAAGCAGTGAAGCTAAACCCTGATTTCAGTGATGCAAAGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CAA 90 bp ACCTGGATGGGATTATCTAAAACAACTGCAGCTTGTTTCCAGTGGGAGGCTTCAGTTCCACCAACCAGTTaGCAACACGATAAAAATTCT +
Preference number: 5 (lower is better)
Translates to: TWMGLSKTTAACFQWEASVPPTS*QHDKNS
Trigger: AGAATTTTTATCGTGTTGCAAACTGGTTGGTGGAAC...TGAAGCCTCCCACTGGAAACAAGCTGCAGTTGTTTTAGATAATCCCATCCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CAA 90 bp GTGTTCAAATACGGAGTCATTAAATCTAGTCTTAAGAGTTCCACTGGCTTGCTTATCCCTGCTTCCATCTaGTTTGCTGCCACGACATCA +
Preference number: 5 (lower is better)
Translates to: VFKYGVIKSSLKSSTGLLIPASI*FAATTS
Trigger: TGATGTCGTGGCAGCAAACAAGATGGAAGCAGGGAT...AAGCAAGCCAGTGGAACTCTTAAGACTAGATTTAATGACTCCGTATTTGAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CAA 90 bp CTGAGTACAAGTTCCTCTCCCATTTCAACCTGGATGGGATTATCTAAAACAACTAAGAGTTCCACTGGCTaGCTTAAAGGTATACAGGGC +
Preference number: 5 (lower is better)
Translates to: LSTSSSPISTWMGLSKTTKSSTG*LKGIQG
Trigger: GCCCTGTATACCTTTAAGCAAGCCAGTGGAACTCTT...AGTTGTTTTAGATAATCCCATCCAGGTTGAAATGGGAGAGGAACTTGTACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS TCA 90 bp TTCTCCTTTGCATCACTGAAATCAGGGTTTAGCTTCACTGCTTTATaGAAATACCCAGCTGCTTCATCCCTAAAGCCCATTCTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: FSFASLKSGFSFTAL*KYPAASSLKPILKR
Trigger: TCTCTTCAGAATGGGCTTTAGGGATGAAGCAGCTGGGTATTTTCATAAAGCAGTGAAGCTAAACCCTGATTTCAGTGATGCAAAGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CAA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGCATGGCAGTCACCACTaGTATGGCCAAAGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQHGSHH*YGQRED
Trigger: ATCTTCCCTTTGGCCATACAAGTGGTGACTGCCATG...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CAA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTAGTTCATACATGGTCTaGGATAACTCACAGGCATAC +
Preference number: 5 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWISSYMV*DNSQAY
Trigger: GTATGCCTGTGAGTTATCCAAGACCATGTATGAACT...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CAA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTCTGCTTCCATCTTGTTaGCTGCCACGACATCACAGG +
Preference number: 5 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSLLPSC*LPRHHR
Trigger: CCTGTGATGTCGTGGCAGCAAACAAGATGGAAGCAG...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS CCA 90 bp AGTATCTACAGAAGAATAAGCCGGACTCTGAAATTTCACATTTGTTaGCAAATGGATACCAGCAATGTCCTTAATACCCACTCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: SIYRRISRTLKFHIC*QMDTSNVLNTHSGE
Trigger: CTCTCCAGAGTGGGTATTAAGGACATTGCTGGTATCCATTTGCCAACAAATGTGAAATTTCAGAGTCCGGCTTATTCTTCTGTAGATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510269.5
CDS-3UTR CAA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTATCCCTGCTTCCATCTaGTTTGCTGCCACGACATCA +
Preference number: 5 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSIPASI*FAATTS
Trigger: TGATGTCGTGGCAGCAAACAAGATGGAAGCAGGGAT...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS-3UTR CAA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTTAGCACTTTCACCTTaGGTCTTTGGCTGTAAAAGT +
Preference number: 5 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWILALSP*VFGCKS
Trigger: ACTTTTACAGCCAAAGACCAAAGGTGAAAGTGCTAA...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CAA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGAAGAGTTCCACTGGCTaGCTTAAAGGTATACAGGGC +
Preference number: 5 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQKSSTG*LKGIQG
Trigger: GCCCTGTATACCTTTAAGCAAGCCAGTGGAACTCTT...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CAA 90 bp ACCCTCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTTTCGGGAATATGTTTaGGAATCTCTATGTCAAGTG +
Preference number: 5 (lower is better)
Translates to: TLSLQWKPFSVSQLQVWIFREYV*ESLCQV
Trigger: CACTTGACATAGAGATTCCAAAACATATTCCCGAAA...AATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CAA 90 bp AAGTGTTTCTTTAGGAAAGTGATTGGCTTCAGATATGAGGTCCAGAGCAATACGTTAGCACTTTCACCTTaGGTCTTTGGCTGTAAAAGT +
Preference number: 5 (lower is better)
Translates to: KCFFRKVIGFRYEVQSNTLALSP*VFGCKS
Trigger: ACTTTTACAGCCAAAGACCAAAGGTGAAAGTGCTAA...CGTATTGCTCTGGACCTCATATCTGAAGCCAATCACTTTCCTAAAGAAACACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CAA 90 bp CTTAATACCCACTCTATGATGTCTTCTTATCTCTGCACATTCTACTGCCATCCCATTATGCTCCATAACTaGTCTGATTTTGGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: LNTHSMMSSYLCTFYCHPIMLHN*SDFGLC
Trigger: ACAAAGGCCAAAATCAGACAAGTTATGGAGCATAAT...GGGATGGCAGTAGAATGTGCAGAGATAAGAAGACATCATAGAGTGGGTATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CAA 90 bp TCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTAAGGTTCCACCAACCAGTTaGCAACACGATAAAAATTCT +
Preference number: 5 (lower is better)
Translates to: SVFSGSLSVFPNYKFGFKVPPTS*QHDKNS
Trigger: AGAATTTTTATCGTGTTGCAAACTGGTTGGTGGAAC...CTTAAATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CAA 90 bp AATTTCACATTTGTTGGCAAATGGATACCAGCAATGTCCTTAATACCCACTCTATTCGTATGTAAGAGTTaGATCCCTGCTTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: NFTFVGKWIPAMSLIPTLFVCKS*IPASIL
Trigger: CAAGATGGAAGCAGGGATCAAACTCTTACATACGAA...TAGAGTGGGTATTAAGGACATTGCTGGTATCCATTTGCCAACAAATGTGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CAA 90 bp AGATTCCAATATACATGTCTGCTCTACAGCATCTGGTTTACTGGTCTGAAGGTTTTTCACCTTTGGTCTTaGGCTGTAAAAGTAAATGCT +
Preference number: 5 (lower is better)
Translates to: RFQYTCLLYSIWFTGLKVFHLWS*AVKVNA
Trigger: AGCATTTACTTTTACAGCCAAAGACCAAAGGTGAAA...AACCTTCAGACCAGTAAACCAGATGCTGTAGAGCAGACATGTATATTGGAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CAA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTTTCGTATGTAAGAGTTaGATCCCTGCTTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSFVCKS*IPASIL
Trigger: CAAGATGGAAGCAGGGATCAAACTCTTACATACGAA...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS-3UTR CAA 90 bp TCAGTCTTCAGTGGAAGCCTTTCAGTGTTTCCCAATTACAAGTTTGGATTTAAGGAAATTTCACATTTGTaGGCAAATGGATACCAGCAA +
Preference number: 5 (lower is better)
Translates to: SVFSGSLSVFPNYKFGFKEISHL*ANGYQQ
Trigger: TTGCTGGTATCCATTTGCCAACAAATGTGAAATTTC...CTTAAATCCAAACTTGTAATTGGGAAACACTGAAAGGCTTCCACTGAAGACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CAA 90 bp AAGCAAAGCAATTTCTGTAGATTCCAATATACATGTCTGCTCTACAGCATCTGGGAAATTTCACATTTGTaGGCAAATGGATACCAGCAA +
Preference number: 5 (lower is better)
Translates to: KQSNFCRFQYTCLLYSIWEISHL*ANGYQQ
Trigger: TTGCTGGTATCCATTTGCCAACAAATGTGAAATTTC...CCAGATGCTGTAGAGCAGACATGTATATTGGAATCTACAGAAATTGCTTTGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CAA 90 bp CCCCCACTAATTAAGACAAGAATTTTGTACTTGTTGATGCTCTATTTACACAGTGAAAACTGCTCTTCATaGCTTTACTGTGATGCTGAC +
Preference number: 5 (lower is better)
Translates to: PPLIKTRILYLLMLYLHSENCSS*LYCDAD
Trigger: GTCAGCATCACAGTAAAGCAATGAAGAGCAGTTTTC...ACTGTGTAAATAGAGCATCAACAAGTACAAAATTCTTGTCTTAATTAGTGGGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS-3UTR CAA 90 bp AATTTCACATTTGTTGGCAAATGGATACCAGCAATGTCCTTAATACCCACTCTATTTCGGGAATATGTTTaGGAATCTCTATGTCAAGTG +
Preference number: 5 (lower is better)
Translates to: NFTFVGKWIPAMSLIPTLFREYV*ESLCQV
Trigger: CACTTGACATAGAGATTCCAAAACATATTCCCGAAA...TAGAGTGGGTATTAAGGACATTGCTGGTATCCATTTGCCAACAAATGTGAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS-3UTR CAA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGTTTCACCTTTGGTCTTaGGCTGTAAAAGTAAATGCT +
Preference number: 5 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQFHLWS*AVKVNA
Trigger: AGCATTTACTTTTACAGCCAAAGACCAAAGGTGAAA...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CAA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGTCTGAAATTTCACATTaGTTGGCAAATGGATACCAG +
Preference number: 5 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQSEISH*LANGYQ
Trigger: CTGGTATCCATTTGCCAACAAATGTGAAATTTCAGA...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CAA 90 bp ACTGAGTATTTAAAGGAAGCAAGATTGGAATTTACAGGTAACCATAACCCTCAGATTATGCTCCATAACTaGTCTGATTTTGGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: TEYLKEARLEFTGNHNPQIMLHN*SDFGLC
Trigger: ACAAAGGCCAAAATCAGACAAGTTATGGAGCATAAT...CTGAGGGTTATGGTTACCTGTAAATTCCAATCTTGCTTCCTTTAAATACTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS-3UTR CAA 90 bp GTACTTGTTGATGCTCTATTTACACAGTTTTCATTGGAAAACTGCTCTTCATTGTCTGAAATTTCACATTaGTTGGCAAATGGATACCAG +
Preference number: 5 (lower is better)
Translates to: VLVDALFTQFSLENCSSLSEISH*LANGYQ
Trigger: CTGGTATCCATTTGCCAACAAATGTGAAATTTCAGA...CAATGAAGAGCAGTTTTCCAATGAAAACTGTGTAAATAGAGCATCAACAAGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS CCA 72 bp CTGCCCCAGCGCCACCCCCGGCGTCTCGGCGGGACCTaGGCCGCGAGTTCGACATGGCAGTCACCACTTGTA +
Preference number: 6 (lower is better)
Translates to: LPQRHPRRLGGT*AASSTWQSPLV
Trigger: TACAAGTGGTGACTGCCATGTCGAACTCGCGGCCCAGGTCCCGCCGAGACGCCGGGGGTGGCGCTGGGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS GCA 72 bp CCGAAGTCCTGGACGCCCAGACAGTGCTCTGCGCTCTaGAAGGACCGCGACACCAGCTCGTCCCGGCCGGCT +
Preference number: 6 (lower is better)
Translates to: PKSWTPRQCSAL*KDRDTSSSRPA
Trigger: AGCCGGCCGGGACGAGCTGGTGTCGCGGTCCTTGCAGAGCGCAGAGCACTGTCTGGGCGTCCAGGACTTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS GCA 72 bp GGCAGTGCCGAAGTCCTGGACGCCCAGACAGTGCTCTaGGCTCTGCAAGGACCGCGACACCAGCTCGTCCCG +
Preference number: 6 (lower is better)
Translates to: GSAEVLDAQTVL*ALQGPRHQLVP
Trigger: CGGGACGAGCTGGTGTCGCGGTCCTTGCAGAGCGCAGAGCACTGTCTGGGCGTCCAGGACTTCGGCACTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS TCA 72 bp TTTCCTTCACGTCGTGTTTCAGCTCCGGCGCCAGGCTaGGCACGAGGAGGTAGTGGGCATAGGCAGTGCCGA +
Preference number: 6 (lower is better)
Translates to: FPSRRVSAPAPG*ARGGSGHRQCR
Trigger: TCGGCACTGCCTATGCCCACTACCTCCTCGTGCTCAGCCTGGCGCCGGAGCTGAAACACGACGTGAAGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS TCA 72 bp CATTCTTCACGTCGTGTTTCAGCTCCGGCGCCAGGCTaGGCACGAGGAGGTAGTGGGCATAGGCAGTGCCGA +
Preference number: 6 (lower is better)
Translates to: HSSRRVSAPAPG*ARGGSGHRQCR
Trigger: TCGGCACTGCCTATGCCCACTACCTCCTCGTGCTCAGCCTGGCGCCGGAGCTGAAACACGACGTGAAGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514886.1
CDS CCA 72 bp CGGCGTCTCGGCGGGACCTGGGCCGCGAGTTCGACATaGCAGTCACCACTTGTATGGCCAAAGGGAAGATAT +
Preference number: 6 (lower is better)
Translates to: RRLGGTWAASST*QSPLVWPKGRY
Trigger: ATATCTTCCCTTTGGCCATACAAGTGGTGACTGCCATGTCGAACTCGCGGCCCAGGTCCCGCCGAGACGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1
CDS CAA 90 bp GCTTCATCCCTAAAGCCCATTCTGAAGAGATGCTCCCCCATACTATaGCAAATCACTTCATCATCAGGAAACAGTTCCAAGGCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: ASSLKPILKRCSPIL*QITSSSGNSSKACS
Trigger: TGAGCAGGCCTTGGAACTGTTTCCTGATGATGAAGTGATTTGCAATAGTATGGGGGAGCATCTCTTCAGAATGGGCTTTAGGGATGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322396.7
CDS TCA 72 bp GCATCACTGAAATCAGGGTTTAGCTTCACTGCTTTATaGAAATACCCAGCTGCTTCATCCCTAAAGCCCATT +
Preference number: 6 (lower is better)
Translates to: ASLKSGFSFTAL*KYPAASSLKPI
Trigger: AATGGGCTTTAGGGATGAAGCAGCTGGGTATTTTCATAAAGCAGTGAAGCTAAACCCTGATTTCAGTGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322396.7
ENST00000514886.1