RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRMT8 (Homo sapiens)

Ensembl gene IDs: ENSG00000111218

Ensembl transcript IDs: ENST00000261252.4, ENST00000382622.4, ENST00000452611.6, ENST00000543701.5

Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCACAGCACGCCAGGTCGCTCTTTGTTGGCAACACAAAGCCTTCGTaGAGGGCTACCAGGGCAGAGCGGAGGAGCTGGAGGCCTTCTGTC +
Preference number: 1 (lower is better)
Translates to: PQHARSLFVGNTKPS*RATRAERRSWRPSV
Trigger: GACAGAAGGCCTCCAGCTCCTCCGCTCTGCCCTGGTAGCCCTTCACGAAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGTGCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR CCA 90 bp TTCACACATGCACGCACACGCACACCACCGCACACACAGATAATCTaGCTTATGCTATCAAAGATGCTATGTCTCCAGGTTCTAGTGGAA +
Preference number: 1 (lower is better)
Translates to: FTHARTRTPPHTQII*LMLSKMLCLQVLVE
Trigger: TTCCACTAGAACCTGGAGACATAGCATCTTTGATAGCATAAGCCAGATTATCTGTGTGTGCGGTGGTGTGCGTGTGCGTGCATGTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR GCA 90 bp AGGTGTTTGTGGGTAAATATCAACTATGCTGCTCACATTCACACATaGACGCACACGCACACCACCGCACACACAGATAATCTGGCTTAT +
Preference number: 1 (lower is better)
Translates to: RCLWVNINYAAHIHT*THTHTTAHTDNLAY
Trigger: ATAAGCCAGATTATCTGTGTGTGCGGTGGTGTGCGTGTGCGTGCATGTGTGAATGTGAGCAGCATAGTTGATATTTACCCACAAACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR-3UTR CCA 90 bp GTGTGTTTATTGAGCGCCCACGGAGTCCGTGGTACTATGCTCAAGGTTCAGAGCGCAGAGCGGAGGAGCTaGAGGCCTTCTGTCCAGTGG +
Preference number: 2 (lower is better)
Translates to: VCLLSAHGVRGTMLKVQSAERRS*RPSVQW
Trigger: CCACTGGACAGAAGGCCTCCAGCTCCTCCGCTCTGC...GCTCTGAACCTTGAGCATAGTACCACGGACTCCGTGGGCGCTCAATAAACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR-3UTR CCA 90 bp CACCCGCAGCATGCAAAACTCAGAAGACCCGGAGAGTCACAGTTAAGGAGGAGAAGCCCACGGGAGCCCTaGGGAGTTCACCAATCTTCA +
Preference number: 2 (lower is better)
Translates to: HPQHAKLRRPGESQLRRRSPREP*GVHQSS
Trigger: TGAAGATTGGTGAACTCCCCAGGGCTCCCGTGGGCT...TCTCCTCCTTAACTGTGACTCTCCGGGTCTTCTGAGTTTTGCATGCTGCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR-3UTR TCA 90 bp TCAAAGATGCTATGTCTCCAGGTTCTAGTGGAAGCAATCTGTCCTAGACACCCGAACACAAAGCCTTCGTaGAGGGCTACCAGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: SKMLCLQVLVEAICPRHPNTKPS*RATRAE
Trigger: CTCTGCCCTGGTAGCCCTTCACGAAGGCTTTGTGTT...CGGGTGTCTAGGACAGATTGCTTCCACTAGAACCTGGAGACATAGCATCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR-3UTR TCA 90 bp AAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGCGCACGCACGGCAGATCGAGGTaGGAGTTCCTTTTCTCGTTG +
Preference number: 2 (lower is better)
Translates to: KSNRISSESNIYSRHTRTHGRSR*EFLFSL
Trigger: CAACGAGAAAAGGAACTCTCACCTCGATCTGCCGTG...CGTGCGCGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR-3UTR GCA 90 bp TCCGTGGTACTATGCTCAAGGTTCAGAGCCACAGTCCAGTCAAAAGGAGACCAGCCACTTGGTTGTATATaGACGCATATACAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: SVVLCSRFRATVQSKGDQPLGCI*THIQVF
Trigger: AAACACCTGTATATGCGTGCATATACAACCAAGTGG...CTGGTCTCCTTTTGACTGGACTGTGGCTCTGAACCTTGAGCATAGTACCACGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR-3UTR CCA 90 bp TCAAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGCGCAGCAAACGGTATTCTTTaGGACGGCACGGCAGATCGA +
Preference number: 2 (lower is better)
Translates to: SKATESPLRVIYILGTRAANGIL*DGTADR
Trigger: TCGATCTGCCGTGCCGTCCCAAAGAATACCGTTTGC...TGCGCGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR CAA 90 bp CCTAGGTCTACCCACTTGGTTGTATATGCACGCATATACAGGTGTTaGTGGGTAAATATCAACTATGCTGCTCACATTCACACATGCACG +
Preference number: 2 (lower is better)
Translates to: PRSTHLVVYARIYRC*WVNINYAAHIHTCT
Trigger: CGTGCATGTGTGAATGTGAGCAGCATAGTTGATATTTACCCACAAACACCTGTATATGCGTGCATATACAACCAAGTGGGTAGACCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR-3UTR CCA 90 bp TATTCAAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGCCAGGTCGCTCTTTGTTaGCAACACAAAGCCTTCGTG +
Preference number: 2 (lower is better)
Translates to: YSKATESPLRVIYILGTRQVALC*QHKAFV
Trigger: CACGAAGGCTTTGTGTTGCCAACAAAGAGCGACCTG...GCGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR TCA 72 bp GCCAGGTCGCTCTTTGTTGGCAACACAAAGCCTTCGTaGAGGGCTACCAGGGCAGAGCGGAGGAGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: ARSLFVGNTKPS*RATRAERRSWR
Trigger: CCTCCAGCTCCTCCGCTCTGCCCTGGTAGCCCTTCACGAAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR-3UTR CAA 90 bp TCGGGGCCCAGCCACAGCACGCCAGGTCGCTCTTTGTTGGCAACACAAAGCCTTTGCAAACGGTATTCTTaGGGACGGCACGGCAGATCG +
Preference number: 3 (lower is better)
Translates to: SGPSHSTPGRSLLATQSLCKRYS*GRHGRS
Trigger: CGATCTGCCGTGCCGTCCCAAAGAATACCGTTTGCA...AAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGTGCTGTGGCTGGGCCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR TCA 72 bp AAACGGTATTCTTTGGGACGGCACGGCAGATCGAGGTaGGAGTTCCTTTTCTCGTTGCTCTCTGCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: KRYSLGRHGRSR*EFLFSLLSAAS
Trigger: GGAAGCTGCAGAGAGCAACGAGAAAAGGAACTCTCACCTCGATCTGCCGTGCCGTCCCAAAGAATACCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR CCA 72 bp TTCTCATGTGTGTTTATTGAGCGCCCACGGAGTCCGTaGTACTATGCTCAAGGTTCAGAGCCACAGTCCAGT +
Preference number: 3 (lower is better)
Translates to: FSCVFIERPRSP*YYAQGSEPQSS
Trigger: ACTGGACTGTGGCTCTGAACCTTGAGCATAGTACCACGGACTCCGTGGGCGCTCAATAAACACACATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR-3UTR CAA 90 bp TCAAAGATGCTATGTCTCCAGGTTCTAGTGGAAGCAATCTGTCCTAGACACCCGACGCCAGGTCGCTCTTaGTTGGCAACACAAAGCCTT +
Preference number: 3 (lower is better)
Translates to: SKMLCLQVLVEAICPRHPTPGRS*LATQSL
Trigger: AAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGT...CGGGTGTCTAGGACAGATTGCTTCCACTAGAACCTGGAGACATAGCATCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR-3UTR CAA 90 bp GTCCGTGGTACTATGCTCAAGGTTCAGAGCCACAGTCCAGTCAAAAGGAGACCACCTAGGTCTACCCACTaGGTTGTATATGCACGCATA +
Preference number: 3 (lower is better)
Translates to: VRGTMLKVQSHSPVKRRPPRSTH*VVYARI
Trigger: TATGCGTGCATATACAACCAAGTGGGTAGACCTAGG...TGGTCTCCTTTTGACTGGACTGTGGCTCTGAACCTTGAGCATAGTACCACGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR CCA 72 bp GGTTTTCAAGTGTGTAGTCCTGCAAACGGTATTCTTTaGGACGGCACGGCAGATCGAGGTGAGAGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: GFQVCSPANGIL*DGTADRGESSF
Trigger: AAAGGAACTCTCACCTCGATCTGCCGTGCCGTCCCAAAGAATACCGTTTGCAGGACTACACACTTGAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR GCA 72 bp TGGGTAAATATCAACTATGCTGCTCACATTCACACATaGACGCACACGCACACCACCGCACACACAGATAAT +
Preference number: 3 (lower is better)
Translates to: WVNINYAAHIHT*THTHTTAHTDN
Trigger: ATTATCTGTGTGTGCGGTGGTGTGCGTGTGCGTGCATGTGTGAATGTGAGCAGCATAGTTGATATTTACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR-3UTR CAA 90 bp CGTGGTACTATGCTCAAGGTTCAGAGCCACAGTCCAGTCAAAAGGAGACCAGAAATCTTCAAGGCAGAGTaGAAAACTCTGGTTTTCAAG +
Preference number: 3 (lower is better)
Translates to: RGTMLKVQSHSPVKRRPEIFKAE*KTLVFK
Trigger: CTTGAAAACCAGAGTTTTCAACTCTGCCTTGAAGAT...TTCTGGTCTCCTTTTGACTGGACTGTGGCTCTGAACCTTGAGCATAGTACCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR CAA 72 bp CCCTCGGGGCCCAGCCACAGCACGCCAGGTCGCTCTTaGTTGGCAACACAAAGCCTTCGTGAAGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: PSGPSHSTPGRS*LATQSLREGLP
Trigger: TGGTAGCCCTTCACGAAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGTGCTGTGGCTGGGCCCCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR TCA 90 bp AAGGAGGAGACGGGGAGACGCGAATACGTTTCCACCCTCGGGGCCCAGCCACAGAACACAAAGCCTTCGTaGAGGGCTACCAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KEETGRREYVSTLGAQPQNTKPS*RATRAE
Trigger: CTCTGCCCTGGTAGCCCTTCACGAAGGCTTTGTGTT...CTGTGGCTGGGCCCCGAGGGTGGAAACGTATTCGCGTCTCCCCGTCTCCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp ACCCGGAGAGTCACAGTTAAGGAGGAGACGGGGAGACGCGAATACGTTTCCACCGGATCCTCTCCAGGCTaGTCGCAAAGTCCGGCCGGC +
Preference number: 4 (lower is better)
Translates to: TRRVTVKEETGRREYVSTGSSPG*SQSPAG
Trigger: GCCGGCCGGACTTTGCGAGCAGCCTGGAGAGGATCC...GGTGGAAACGTATTCGCGTCTCCCCGTCTCCTCCTTAACTGTGACTCTCCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp ACCCGGAGAGTCACAGTTAAGGAGGAGACGGGGAGACGCGAATACGTTTCCACCGGCTGTTCACCTCGGTaGTCTCGGCCGCGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: TRRVTVKEETGRREYVSTGCSPR*SRPRSP
Trigger: CGGAGAACGCGGCCGAGAGCACCGAGGTGAACAGCC...GGTGGAAACGTATTCGCGTCTCCCCGTCTCCTCCTTAACTGTGACTCTCCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp CCCACGGGAGCCCTGGGGAGTTCACCAATCTTCAAGGCAGAGTTGAAAACTCTGACCCAGCCCCTCAGCTaGAGCGTCGGCCGGCACAGT +
Preference number: 4 (lower is better)
Translates to: PTGALGSSPIFKAELKTLTQPLS*SVGRHS
Trigger: ACTGTGCCGGCCGACGCTCCAGCTGAGGGGCTGGGT...CAGAGTTTTCAACTCTGCCTTGAAGATTGGTGAACTCCCCAGGGCTCCCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp AAGGAGGAGACGGGGAGACGCGAATACGTTTCCACCCTCGGGGCCCAGCCACAGCCTTGGCAGCGAACATaGAAAGGATCCCAGTACCAC +
Preference number: 4 (lower is better)
Translates to: KEETGRREYVSTLGAQPQPWQRT*KGSQYH
Trigger: GTGGTACTGGGATCCTTTCCATGTTCGCTGCCAAGG...CTGTGGCTGGGCCCCGAGGGTGGAAACGTATTCGCGTCTCCCCGTCTCCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp AAGGAGGAGACGGGGAGACGCGAATACGTTTCCACCCTCGGGGCCCAGCCACAGGCAAACGGTATTCTTTaGGACGGCACGGCAGATCGA +
Preference number: 4 (lower is better)
Translates to: KEETGRREYVSTLGAQPQANGIL*DGTADR
Trigger: TCGATCTGCCGTGCCGTCCCAAAGAATACCGTTTGC...CTGTGGCTGGGCCCCGAGGGTGGAAACGTATTCGCGTCTCCCCGTCTCCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp GTGTGTTTATTGAGCGCCCACGGAGTCCGTGGTACTATGCTCAAGGTTCAGAGCGCAGCTTGGACATCTTaGCCCGTCCTGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VCLLSAHGVRGTMLKVQSAAWTS*PVLGSW
Trigger: CCAGCTGCCCAGGACGGGGCAAGATGTCCAAGCTGC...GCTCTGAACCTTGAGCATAGTACCACGGACTCCGTGGGCGCTCAATAAACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR TCA 90 bp ACCCGGAGAGTCACAGTTAAGGAGGAGACGGGGAGACGCGAATACGTTTCCACCTGGAGTTCCGGTAAGTaGGAGTCCGCACCTCATCCT +
Preference number: 4 (lower is better)
Translates to: TRRVTVKEETGRREYVSTWSSGK*ESAPHP
Trigger: AGGATGAGGTGCGGACTCTCACTTACCGGAACTCCA...GGTGGAAACGTATTCGCGTCTCCCCGTCTCCTCCTTAACTGTGACTCTCCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp ACAGCACGCCAGGTCGCTCTTTGTTGGCAACACAAAGCCTTCGTGAAGGGCTACCACCTTCTTGGCCCCTaGCTTGGCAGCGAACATGGA +
Preference number: 4 (lower is better)
Translates to: TARQVALCWQHKAFVKGYHLLGP*LGSEHG
Trigger: TCCATGTTCGCTGCCAAGGCAGGGGCCAAGAAGGTG...GTAGCCCTTCACGAAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp CGTGGTACTATGCTCAAGGTTCAGAGCCACAGTCCAGTCAAAAGGAGACCAGAACCTCTCCACCCGCGCTaGGGGCTAAGCTCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: RGTMLKVQSHSPVKRRPEPLHPR*GLSSRE
Trigger: TTCCCTCGAGCTTAGCCCGCAGCGCGGGTGGAGAGG...TTCTGGTCTCCTTTTGACTGGACTGTGGCTCTGAACCTTGAGCATAGTACCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp CCGTGGTACTATGCTCAAGGTTCAGAGCCACAGTCCAGTCAAAAGGAGACCAGAGCAGAGCGGAGGAGCTaGAGGCCTTCTGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PWYYAQGSEPQSSQKETRAERRS*RPSVQW
Trigger: CCACTGGACAGAAGGCCTCCAGCTCCTCCGCTCTGC...TCTGGTCTCCTTTTGACTGGACTGTGGCTCTGAACCTTGAGCATAGTACCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp ACCCGGAGAGTCACAGTTAAGGAGGAGACGGGGAGACGCGAATACGTTTCCACCCGCCCACGGAGTCCGTaGTACTATGCTCAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: TRRVTVKEETGRREYVSTRPRSP*YYAQGS
Trigger: TGAACCTTGAGCATAGTACCACGGACTCCGTGGGCG...GGTGGAAACGTATTCGCGTCTCCCCGTCTCCTCCTTAACTGTGACTCTCCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp GTGTGTTTATTGAGCGCCCACGGAGTCCGTGGTACTATGCTCAAGGTTCAGAGCAGCCCACGGGAGCCCTaGGGAGTTCACCAATCTTCA +
Preference number: 4 (lower is better)
Translates to: VCLLSAHGVRGTMLKVQSSPREP*GVHQSS
Trigger: TGAAGATTGGTGAACTCCCCAGGGCTCCCGTGGGCT...GCTCTGAACCTTGAGCATAGTACCACGGACTCCGTGGGCGCTCAATAAACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR TCA 90 bp ACAGCACGCCAGGTCGCTCTTTGTTGGCAACACAAAGCCTTCGTGAAGGGCTACCCGGCAAGGGTTTGGTaGTACCGAGATAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: TARQVALCWQHKAFVKGYPARVW*YRDSRG
Trigger: TCCTCTACTATCTCGGTATCACCAAACCCTTGCCGG...GTAGCCCTTCACGAAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR TCA 90 bp ACCCGGAGAGTCACAGTTAAGGAGGAGACGGGGAGACGCGAATACGTTTCCACCGGCAGAATGCAGATGTaGACGATAGCTCTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: TRRVTVKEETGRREYVSTGRMQM*TIALPS
Trigger: AGACGGAAGAGCTATCGTTCACATCTGCATTCTGCC...GGTGGAAACGTATTCGCGTCTCCCCGTCTCCTCCTTAACTGTGACTCTCCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp GTGTTTATTGAGCGCCCACGGAGTCCGTGGTACTATGCTCAAGGTTCAGAGCCATGGCCACGTCCCGGATaGAGGTCATGTCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: VFIERPRSPWYYAQGSEPWPRPG*RSCQSH
Trigger: ATGGCTTTGACATGACCTGCATCCGGGACGTGGCCA...TGGCTCTGAACCTTGAGCATAGTACCACGGACTCCGTGGGCGCTCAATAAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp ACCCGGAGAGTCACAGTTAAGGAGGAGACGGGGAGACGCGAATACGTTTCCACCTTTCTCGTTGCTCTCTaGAGCTTCCCACGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: TRRVTVKEETGRREYVSTFLVAL*SFPRVL
Trigger: TAGCACACGTGGGAAGCTGCAGAGAGCAACGAGAAA...GGTGGAAACGTATTCGCGTCTCCCCGTCTCCTCCTTAACTGTGACTCTCCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp TGGAAGCAATCTGTCCTAGACACCCGCAGCATGCAAAACTCAGAAGACCCGGAGCGTGGACGTAGTCGTTaGGCTGTATCTGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: WKQSVLDTRSMQNSEDPERGRSR*AVSAGR
Trigger: TCTGCCTGCAGATACAGCGCAACGACTACGTCCACG...CTCCGGGTCTTCTGAGTTTTGCATGCTGCGGGTGTCTAGGACAGATTGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp ACAGCACGCCAGGTCGCTCTTTGTTGGCAACACAAAGCCTTCGTGAAGGGCTACGCATTGGTCACCACTTaGTTTGGATCCACGATGTCC +
Preference number: 4 (lower is better)
Translates to: TARQVALCWQHKAFVKGYALVTT*FGSTMS
Trigger: GGACATCGTGGATCCAAAGCAAGTGGTGACCAATGC...GTAGCCCTTCACGAAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp TGGAAGCAATCTGTCCTAGACACCCGCAGCATGCAAAACTCAGAAGACCCGGAGTCCTCCCTTCTCATCTaGTCCGGATTCCTTCACACG +
Preference number: 4 (lower is better)
Translates to: WKQSVLDTRSMQNSEDPESSLLI*SGFLHT
Trigger: CGTGTGAAGGAATCCGGAGCAGATGAGAAGGGAGGA...CTCCGGGTCTTCTGAGTTTTGCATGCTGCGGGTGTCTAGGACAGATTGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp ACGCACACGCACACCACCGCACACACAGATAATCTGGCTTATGCTATCAAAGATCATCTTGCCCCGTCCTaGGCAGCTGGGTTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: THTHTTAHTDNLAYAIKDHLAPS*AAGLSG
Trigger: TCCACTCAACCCAGCTGCCCAGGACGGGGCAAGATG...ATCTTTGATAGCATAAGCCAGATTATCTGTGTGTGCGGTGGTGTGCGTGTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp GAAGCAATCTGTCCTAGACACCCGCAGCATGCAAAACTCAGAAGACCCGGAGAGCGAGGTCATCTCCTCTaGGTTCAGCAGCTTGGACAT +
Preference number: 4 (lower is better)
Translates to: EAICPRHPQHAKLRRPGERGHLL*VQQLGH
Trigger: ATGTCCAAGCTGCTGAACCCAGAGGAGATGACCTCG...CTCTCCGGGTCTTCTGAGTTTTGCATGCTGCGGGTGTCTAGGACAGATTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp TCGGGGCCCAGCCACAGCACGCCAGGTCGCTCTTTGTTGGCAACACAAAGCCTTTGGCATTTGGCTTCATaGATATGGTCCCGTAGATTT +
Preference number: 4 (lower is better)
Translates to: SGPSHSTPGRSLLATQSLWHLAS*IWSRRF
Trigger: AAATCTACGGGACCATATCCATGAAGCCAAATGCCA...AAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGTGCTGTGGCTGGGCCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp TGGAAGCAATCTGTCCTAGACACCCGCAGCATGCAAAACTCAGAAGACCCGGAGACATCTGGTAAGGGGTaGGGAAGGGGCGAACTAATC +
Preference number: 4 (lower is better)
Translates to: WKQSVLDTRSMQNSEDPETSGKG*GRGELI
Trigger: GATTAGTTCGCCCCTTCCCCACCCCTTACCAGATGT...CTCCGGGTCTTCTGAGTTTTGCATGCTGCGGGTGTCTAGGACAGATTGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp TCGGGGCCCAGCCACAGCACGCCAGGTCGCTCTTTGTTGGCAACACAAAGCCTTCCACTTGGTTGTATATaGACGCATATACAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SGPSHSTPGRSLLATQSLPLGCI*THIQVF
Trigger: AAACACCTGTATATGCGTGCATATACAACCAAGTGG...AAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGTGCTGTGGCTGGGCCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp TCAAAGATGCTATGTCTCCAGGTTCTAGTGGAAGCAATCTGTCCTAGACACCCGACTCCTCTCAACTTCTaGCGATCCGCTGGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: SKMLCLQVLVEAICPRHPTPLNF*RSAGRS
Trigger: GCTTCGCCCAGCGGATCGGCAGAAGTTGAGAGGAGT...CGGGTGTCTAGGACAGATTGCTTCCACTAGAACCTGGAGACATAGCATCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp ACGCACACGCACACCACCGCACACACAGATAATCTGGCTTATGCTATCAAAGATCCCGTCCTGGGCAGCTaGGTTGAGTGGACACATGAT +
Preference number: 4 (lower is better)
Translates to: THTHTTAHTDNLAYAIKDPVLGS*VEWTHD
Trigger: ATCATGTGTCCACTCAACCCAGCTGCCCAGGACGGG...ATCTTTGATAGCATAAGCCAGATTATCTGTGTGTGCGGTGGTGTGCGTGTGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp TCAAAGATGCTATGTCTCCAGGTTCTAGTGGAAGCAATCTGTCCTAGACACCCGCTGGGTTCAGCAGCTTaGACATCTTGCCCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: SKMLCLQVLVEAICPRHPLGSAA*TSCPVL
Trigger: CAGGACGGGGCAAGATGTCCAAGCTGCTGAACCCAG...CGGGTGTCTAGGACAGATTGCTTCCACTAGAACCTGGAGACATAGCATCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp ATGCTATGTCTCCAGGTTCTAGTGGAAGCAATCTGTCCTAGACACCCGCAGCATTCTTGGCCCCTGCCTTaGCAGCGAACATGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: MLCLQVLVEAICPRHPQHSWPLP*QRTWKG
Trigger: TCCTTTCCATGTTCGCTGCCAAGGCAGGGGCCAAGA...ATGCTGCGGGTGTCTAGGACAGATTGCTTCCACTAGAACCTGGAGACATAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp ACACGCACACCACCGCACACACAGATAATCTGGCTTATGCTATCAAAGATGCTACTAGAGGCTCCTTCATaGCCACGTCCCGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: TRTPPHTQIIWLMLSKMLLEAPS*PRPGCR
Trigger: CCTGCATCCGGGACGTGGCCATGAAGGAGCCTCTAG...TAGCATCTTTGATAGCATAAGCCAGATTATCTGTGTGTGCGGTGGTGTGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp CACCCGCAGCATGCAAAACTCAGAAGACCCGGAGAGTCACAGTTAAGGAGGAGATACCACGTACAAAGCTaGCCGGTCTGGAAACATAAG +
Preference number: 4 (lower is better)
Translates to: HPQHAKLRRPGESQLRRRYHVQS*PVWKHK
Trigger: CTTATGTTTCCAGACCGGGCAGCTTTGTACGTGGTA...TCTCCTCCTTAACTGTGACTCTCCGGGTCTTCTGAGTTTTGCATGCTGCGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp CATGTGTGTTTATTGAGCGCCCACGGAGTCCGTGGTACTATGCTCAAGGTTCAGGAGTCCGTGGTACTATaGTCAAGGTTCAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: HVCLLSAHGVRGTMLKVQESVVL*SRFRAT
Trigger: TGTGGCTCTGAACCTTGAGCATAGTACCACGGACTC...CTGAACCTTGAGCATAGTACCACGGACTCCGTGGGCGCTCAATAAACACACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp ACGCACACGCACACCACCGCACACACAGATAATCTGGCTTATGCTATCAAAGATCAAAGCTGCCCGGTCTaGAAACATAAGCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: THTHTTAHTDNLAYAIKDQSCPV*KHKPSR
Trigger: CCTGGAGGGCTTATGTTTCCAGACCGGGCAGCTTTG...ATCTTTGATAGCATAAGCCAGATTATCTGTGTGTGCGGTGGTGTGCGTGTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp GTGTTTATTGAGCGCCCACGGAGTCCGTGGTACTATGCTCAAGGTTCAGAGCCATTGGCTTCATGGATATaGTCCCGTAGATTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VFIERPRSPWYYAQGSEPLASWI*SRRFPP
Trigger: GGGAGGAAATCTACGGGACCATATCCATGAAGCCAA...TGGCTCTGAACCTTGAGCATAGTACCACGGACTCCGTGGGCGCTCAATAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp ACGCACACGCACACCACCGCACACACAGATAATCTGGCTTATGCTATCAAAGATGGCAGCTGGGTTGAGTaGACACATGATGGACGCATT +
Preference number: 4 (lower is better)
Translates to: THTHTTAHTDNLAYAIKDGSWVE*THDGRI
Trigger: AATGCGTCCATCATGTGTCCACTCAACCCAGCTGCC...ATCTTTGATAGCATAAGCCAGATTATCTGTGTGTGCGGTGGTGTGCGTGTGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp ACAGCACGCCAGGTCGCTCTTTGTTGGCAACACAAAGCCTTCGTGAAGGGCTACCACATTTTTGGCATTTaGCTTCATGGATATGGTCCC +
Preference number: 4 (lower is better)
Translates to: TARQVALCWQHKAFVKGYHIFGI*LHGYGP
Trigger: GGGACCATATCCATGAAGCCAAATGCCAAAAATGTG...GTAGCCCTTCACGAAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGTGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR TCA 90 bp GAAAACTCTGGTTTTCAAGTGTGTAGTCCTGCAAACGGTATTCTTTGGGACGGCCACGGCAGATCGAGGTaGGAGTTCCTTTTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: ENSGFQVCSPANGILWDGHGRSR*EFLFSL
Trigger: CAACGAGAAAAGGAACTCTCACCTCGATCTGCCGTG...GCCGTCCCAAAGAATACCGTTTGCAGGACTACACACTTGAAAACCAGAGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp ACGGGAGCCCTGGGGAGTTCACCAATCTTCAAGGCAGAGTTGAAAACTCTGGTTTTGTCCTTGAACACGTaGTTGTTGTGGTACATGGAG +
Preference number: 4 (lower is better)
Translates to: TGALGSSPIFKAELKTLVLSLNT*LLWYME
Trigger: CTCCATGTACCACAACAAGCACGTGTTCAAGGACAA...AACCAGAGTTTTCAACTCTGCCTTGAAGATTGGTGAACTCCCCAGGGCTCCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp AGCCACAGCACGCCAGGTCGCTCTTTGTTGGCAACACAAAGCCTTCGTGAAGGGAAATATCAACTATGCTaGTCACATTCACACATGCAC +
Preference number: 4 (lower is better)
Translates to: SHSTPGRSLLATQSLREGKYQLC*SHSHMH
Trigger: GTGCATGTGTGAATGTGAGCAGCATAGTTGATATTT...CCCTTCACGAAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGTGCTGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp AGCCACAGCACGCCAGGTCGCTCTTTGTTGGCAACACAAAGCCTTCGTGAAGGGGGTAAATATCAACTATaGTGCTCACATTCACACATG +
Preference number: 4 (lower is better)
Translates to: SHSTPGRSLLATQSLREGGKYQL*CSHSHM
Trigger: CATGTGTGAATGTGAGCAGCATAGTTGATATTTACC...CCCTTCACGAAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGTGCTGTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp CCCTCTGAGAGAACACCTAGGTCTACCCACTTGGTTGTATATGCACGCATATACTCGTTGCGCTGTATCTaGAGGCAGAATGCAGATGTG +
Preference number: 4 (lower is better)
Translates to: PSERTPRSTHLVVYARIYSLRCI*RQNADV
Trigger: CACATCTGCATTCTGCCTGCAGATACAGCGCAACGA...GTATATGCGTGCATATACAACCAAGTGGGTAGACCTAGGTGTTCTCTCAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp CGTGGTACTATGCTCAAGGTTCAGAGCCACAGTCCAGTCAAAAGGAGACCAGAAAGGAGGAGAGAGAGCTaGTGTCGCTTTAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: RGTMLKVQSHSPVKRRPERRRES*CRFKRE
Trigger: CTCTCTTTTAAAGCGACACCAGCTCTCTCTCCTCCT...TTCTGGTCTCCTTTTGACTGGACTGTGGCTCTGAACCTTGAGCATAGTACCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp GAAGCAATCTGTCCTAGACACCCGCAGCATGCAAAACTCAGAAGACCCGGAGAGACATTCTCCCACCAGTaGATTTTGAAGTCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: EAICPRHPQHAKLRRPGETFSHQ*ILKSLY
Trigger: GTACAAGGACTTCAAAATCCACTGGTGGGAGAATGT...CTCTCCGGGTCTTCTGAGTTTTGCATGCTGCGGGTGTCTAGGACAGATTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp GTGTTTATTGAGCGCCCACGGAGTCCGTGGTACTATGCTCAAGGTTCAGAGCCATTATCAAACAGGCATTaGTCACCACTTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: VFIERPRSPWYYAQGSEPLSNRH*SPLALD
Trigger: ATCCAAAGCAAGTGGTGACCAATGCCTGTTTGATAA...TGGCTCTGAACCTTGAGCATAGTACCACGGACTCCGTGGGCGCTCAATAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp GTGTTTATTGAGCGCCCACGGAGTCCGTGGTACTATGCTCAAGGTTCAGAGCCAAGTAGTCAGAAATACTaGAGCATTCGATCCCAAACA +
Preference number: 4 (lower is better)
Translates to: VFIERPRSPWYYAQGSEPSSQKY*SIRSQT
Trigger: TGTTTGGGATCGAATGCTCCAGTATTTCTGACTACT...TGGCTCTGAACCTTGAGCATAGTACCACGGACTCCGTGGGCGCTCAATAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp CATGTGTGTTTATTGAGCGCCCACGGAGTCCGTGGTACTATGCTCAAGGTTCAGATGATGTTGTCCAAGTaGTTGGCCTTAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: HVCLLSAHGVRGTMLKVQMMLSK*LALMIF
Trigger: GAAGATCATTAAGGCCAACCACTTGGACAACATCAT...CTGAACCTTGAGCATAGTACCACGGACTCCGTGGGCGCTCAATAAACACACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp GAAAACTCTGGTTTTCAAGTGTGTAGTCCTGCAAACGGTATTCTTTGGGACGGCCAGCGGAGTCTGTTCTaGAGTCTCCACTTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: ENSGFQVCSPANGILWDGQRSLF*SLHFLL
Trigger: TAAAAGAAAGTGGAGACTGCAGAACAGACTCCGCTG...GCCGTCCCAAAGAATACCGTTTGCAGGACTACACACTTGAAAACCAGAGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp CCGTGGTACTATGCTCAAGGTTCAGAGCCACAGTCCAGTCAAAAGGAGACCAGACACACACAGATAATCTaGCTTATGCTATCAAAGATG +
Preference number: 4 (lower is better)
Translates to: PWYYAQGSEPQSSQKETRHTQII*LMLSKM
Trigger: CATCTTTGATAGCATAAGCCAGATTATCTGTGTGTG...TCTGGTCTCCTTTTGACTGGACTGTGGCTCTGAACCTTGAGCATAGTACCACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR TCA 90 bp TATTCAAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGCCTCATGTGTGTTTATTaGGCGCCCACGGAGTCCGTG +
Preference number: 4 (lower is better)
Translates to: YSKATESPLRVIYILGTRLMCVY*APTESV
Trigger: CACGGACTCCGTGGGCGCTCAATAAACACACATGAG...GCGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR TCA 90 bp TCAAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGCGCAAATCCAAGTCTACTGTaGAATCGAGGTCTCGCACAT +
Preference number: 4 (lower is better)
Translates to: SKATESPLRVIYILGTRANPSLL*NRGLAH
Trigger: ATGTGCGAGACCTCGATTTCACAGTAGACTTGGATT...TGCGCGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp CTATTCAAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGCAGGTCGCTCTTTGTTaGCAACACAAAGCCTTCGTG +
Preference number: 4 (lower is better)
Translates to: LFKSNRISSESNIYSRHTQVALC*QHKAFV
Trigger: CACGAAGGCTTTGTGTTGCCAACAAAGAGCGACCTG...CGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTTGAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
3UTR CAA 72 bp ACCCACTTGGTTGTATATGCACGCATATACAGGTGTTaGTGGGTAAATATCAACTATGCTGCTCACATTCAC +
Preference number: 4 (lower is better)
Translates to: THLVVYARIYRC*WVNINYAAHIH
Trigger: GTGAATGTGAGCAGCATAGTTGATATTTACCCACAAACACCTGTATATGCGTGCATATACAACCAAGTGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR TCA 90 bp CTATTCAAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGGTACCACTTTGTCCTTaGACACGTGCTTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LFKSNRISSESNIYSRHTVPLCP*TRACCG
Trigger: ACCACAACAAGCACGTGTTCAAGGACAAAGTGGTAC...CGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTTGAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR TCA 90 bp CTATTCAAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGCAAAGATCACCGTGTTaGGCATGGACTCATAGAACA +
Preference number: 4 (lower is better)
Translates to: LFKSNRISSESNIYSRHTQRSPC*AWTHRT
Trigger: TGTTCTATGAGTCCATGCTCAACACGGTGATCTTTG...CGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTTGAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR GCA 90 bp GTCAAAAGGAGACCAGAACTAGTACAGAGAATGTTTCATAGCTGCTTAACATCTAGAATGTTTCATAGCTaGTTAACATCTGGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: VKRRPELVQRMFHSCLTSRMFHS*LTSGKG
Trigger: CCCCTTACCAGATGTTAAGCAGCTATGAAACATTCT...AGATGTTAAGCAGCTATGAAACATTCTCTGTACTAGTTCTGGTCTCCTTTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp CTATTCAAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGCTAGGTCTACCCACTTaGTTGTATATGCACGCATAT +
Preference number: 4 (lower is better)
Translates to: LFKSNRISSESNIYSRHTLGLPT*LYMHAY
Trigger: ATATGCGTGCATATACAACCAAGTGGGTAGACCTAG...CGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTTGAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CCA 90 bp GTCAAAAGGAGACCAGAACTAGTACAGAGAATGTTTCATAGCTGCTTAACATCTAACCCCATTTTCTTGTaGCACTTGGTAAATTCAATA +
Preference number: 4 (lower is better)
Translates to: VKRRPELVQRMFHSCLTSNPIFL*HLVNSI
Trigger: TATTGAATTTACCAAGTGCCACAAGAAAATGGGGTT...AGATGTTAAGCAGCTATGAAACATTCTCTGTACTAGTTCTGGTCTCCTTTTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS GCA 90 bp AGCCTCCGCGGCGGCGGCGGCGGCGGTCGCGGATCCTCTCCAGGCTaGTCGCAAAGTCCGGCCGGCCGGAGGCAGCCGCCAACTCCTCTC +
Preference number: 5 (lower is better)
Translates to: SLRGGGGGGRGSSPG*SQSPAGRRQPPTPL
Trigger: GAGAGGAGTTGGCGGCTGCCTCCGGCCGGCCGGACTTTGCGAGCAGCCTGGAGAGGATCCGCGACCGCCGCCGCCGCCGCCGCGGAGGCT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS CCA 90 bp CGCAGCTGGAAGGCGCCAAGTGGGAGCCTCCTCCTGACAGCTCCTTaGCTGGAGCCCCCGGATGACTCAGGCGCCAGGGACACCATGCTC +
Preference number: 5 (lower is better)
Translates to: RSWKAPSGSLLLTAP*LEPPDDSGARDTML
Trigger: GAGCATGGTGTCCCTGGCGCCTGAGTCATCCGGGGGCTCCAGCCAAGGAGCTGTCAGGAGGAGGCTCCCACTTGGCGCCTTCCAGCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 90 bp AAGTGGGAGCCTCCTCCTGACAGCTCCTTGGCTGGAGCCCCCGGATaGCTCAGGCGCCAGGGACACCATGCTCAGCCCTGTCCCCCACCA +
Preference number: 5 (lower is better)
Translates to: KWEPPPDSSLAGAPG*LRRQGHHAQPCPPP
Trigger: TGGTGGGGGACAGGGCTGAGCATGGTGTCCCTGGCGCCTGAGTCATCCGGGGGCTCCAGCCAAGGAGCTGTCAGGAGGAGGCTCCCACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp CCGACTCCAGCCAGGGTGCAGGTCCCAGGAGAACCAGCCCTTTCCTaGGCTGCCAGGTCCCTGGCCTTCAGGCTGCACTGTCTGTGGGGT +
Preference number: 5 (lower is better)
Translates to: PTPARVQVPGEPALS*AARSLAFRLHCLWG
Trigger: ACCCCACAGACAGTGCAGCCTGAAGGCCAGGGACCTGGCAGCCCAGGAAAGGGCTGGTTCTCCTGGGACCTGCACCCTGGCTGGAGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 90 bp CGGGTGGAGGCAGAGGGCAAGAGGCTGGCTCTGTGGAAGCCAGCATaGAGGAGGAAGCGGCGTGCTCACCCCAAACACCTTCTTGGCCCC +
Preference number: 5 (lower is better)
Translates to: RVEAEGKRLALWKPA*RRKRRAHPKHLLGP
Trigger: GGGGCCAAGAAGGTGTTTGGGGTGAGCACGCCGCTTCCTCCTGCATGCTGGCTTCCACAGAGCCAGCCTCTTGCCCTCTGCCTCCACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 90 bp GCGTCTCAGGCACACTGCCAGGGGTTCTGGACATGGAGGGGCAGCTaGCAAGAGCCGTCCTCACCTCCGGAGCCGGCTCTCTTACAGAGG +
Preference number: 5 (lower is better)
Translates to: ASQAHCQGFWTWRGS*QEPSSPPEPALLQR
Trigger: CCTCTGTAAGAGAGCCGGCTCCGGAGGTGAGGACGGCTCTTGGCAGCTGCCCCTCCATGTCCAGAACCCCTGGCAGTGTGCCTGAGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp CTCCGGAGCCGGCTCTCTTACAGAGGCTGGCCTGTGCTAAGGCCCTaGGCTCTACTCACCTCCACACTTGGGGGCCCCTCAGACTACCCC +
Preference number: 5 (lower is better)
Translates to: LRSRLSYRGWPVLRP*ALLTSTLGGPSDYP
Trigger: GGGGTAGTCTGAGGGGCCCCCAAGTGTGGAGGTGAGTAGAGCCCAGGGCCTTAGCACAGGCCAGCCTCTGTAAGAGAGCCGGCTCCGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp AGCTCCAGCCCAGGGTTAGCGTCTCAGGCACACTGCCAGGGGTTCTaGACATGGAGGGGCAGCTGCCAAGAGCCGTCCTCACCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: SSSPGLASQAHCQGF*TWRGSCQEPSSPPE
Trigger: CTCCGGAGGTGAGGACGGCTCTTGGCAGCTGCCCCTCCATGTCCAGAACCCCTGGCAGTGTGCCTGAGACGCTAACCCTGGGCTGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 90 bp GGTTGGAAGCCAAGCTCCAGCCCAGGGTTAGCGTCTCAGGCACACTaGCAGGGGTTCTGGACATGGAGGGGCAGCTGCCAAGAGCCGTCC +
Preference number: 5 (lower is better)
Translates to: GWKPSSSPGLASQAH*QGFWTWRGSCQEPS
Trigger: GGACGGCTCTTGGCAGCTGCCCCTCCATGTCCAGAACCCCTGGCAGTGTGCCTGAGACGCTAACCCTGGGCTGGAGCTTGGCTTCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp GAGAAAAGGGCGGGAGGCAGACAGATCGCGCCAAGTCACCGCAGCTaGAAGGCGCCAAGTGGGAGCCTCCTCCTGACAGCTCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: EKRAGGRQIAPSHRS*KAPSGSLLLTAPWL
Trigger: CAGCCAAGGAGCTGTCAGGAGGAGGCTCCCACTTGGCGCCTTCCAGCTGCGGTGACTTGGCGCGATCTGTCTGCCTCCCGCCCTTTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 90 bp CCTTGGGCCTCCGGATGGGCCCCTGCCCTCAGCAAGTGCCTCGGCTaGGAACGTCACAGCTTTTCCTGGTCAAAGCTGCACCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: PWASGWAPALSKCLG*ERHSFSWSKLHLRQ
Trigger: CTGCCTCAGGTGCAGCTTTGACCAGGAAAAGCTGTGACGTTCTCAGCCGAGGCACTTGCTGAGGGCAGGGGCCCATCCGGAGGCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp TGGACCTTCCCAGGCCCTCTGTCATCAGGCTGGGCAAAGCTGCCTTaGGAGAGCCAGGGGATAGGTAGGAGGCTTCCCAGAGGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: WTFPGPLSSGWAKLP*ESQGIGRRLPRGSA
Trigger: GGCTGACCCTCTGGGAAGCCTCCTACCTATCCCCTGGCTCTCCCAAGGCAGCTTTGCCCAGCCTGATGACAGAGGGCCTGGGAAGGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp AGGCCGGCACTGAGACGGGGCCTCGGTGCTGGGAAAGAAAGCACGTaGGGGTCACCAGAGGACTCAAGTCCAGCTCTGATGCCCTGTGAC +
Preference number: 5 (lower is better)
Translates to: RPALRRGLGAGKEST*GSPEDSSPALMPCD
Trigger: GTCACAGGGCATCAGAGCTGGACTTGAGTCCTCTGGTGACCCCCACGTGCTTTCTTTCCCAGCACCGAGGCCCCGTCTCAGTGCCGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS-3UTR CAA 90 bp AGCCTTCGTGAAGGGCTACCAGGGCAGAGCGGAGGAGCTGGAGGCCTTCTGTCCATCCCAAACACCTTCTaGGCCCCTGCCTTGGCAGCG +
Preference number: 5 (lower is better)
Translates to: SLREGLPGQSGGAGGLLSIPNTF*APALAA
Trigger: CGCTGCCAAGGCAGGGGCCAAGAAGGTGTTTGGGAT...GGACAGAAGGCCTCCAGCTCCTCCGCTCTGCCCTGGTAGCCCTTCACGAAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS CCA 90 bp AGTGATGAGGAGCATGCGACCCGGAGCCAGGCCTGGATTTATGCCTaGCCACTGCCCTTCCTAACTGCGCCTCAGTGTCCTCCCGAGAGA +
Preference number: 5 (lower is better)
Translates to: SDEEHATRSQAWIYA*PLPFLTAPQCPPER
Trigger: TCTCTCGGGAGGACACTGAGGCGCAGTTAGGAAGGGCAGTGGCCAGGCATAAATCCAGGCCTGGCTCCGGGTCGCATGCTCCTCATCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 90 bp GGGTTTTCCAAGTCAGGCTTGGAGGAGGAATGCTGCCCTGCTGGGTaGCTTAGGAGCAGACCTCTGGAGGCAGCAGGTGGCCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: GFSKSGLEEECCPAG*LRSRPLEAAGGQED
Trigger: ATCCTCCTGGCCACCTGCTGCCTCCAGAGGTCTGCTCCTAAGTCACCCAGCAGGGCAGCATTCCTCCTCCAAGCCTGACTTGGAAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 90 bp GCCTCGGCTGAGAACGTCACAGCTTTTCCTGGTCAAAGCTGCACCTaGGGCAGCTTGAGGGCAGCCCAAGCTTCCAGAAGACCCTCGGCA +
Preference number: 5 (lower is better)
Translates to: ASAENVTAFPGQSCT*GSLRAAQASRRPSA
Trigger: TGCCGAGGGTCTTCTGGAAGCTTGGGCTGCCCTCAAGCTGCCTCAGGTGCAGCTTTGACCAGGAAAAGCTGTGACGTTCTCAGCCGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp GGTCATCTCCTCTGGGTTCAGCAGCTTGGACATCTTGCCCCGTCCTaGGCAGCTGGGTTGAGTGGACACATGATGGACGCATTGCACGGG +
Preference number: 5 (lower is better)
Translates to: GHLLWVQQLGHLAPS*AAGLSGHMMDALHG
Trigger: CCCGTGCAATGCGTCCATCATGTGTCCACTCAACCCAGCTGCCCAGGACGGGGCAAGATGTCCAAGCTGCTGAACCCAGAGGAGATGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS CCA 90 bp CTCCCTCTCTCTCTGTCTCTCTCTCCCGCCATCTCGTCTCCCCACTaGAGGACAGCAGTGGGTGGAAGGGGGTCTGGAACAGGAGAAACT +
Preference number: 5 (lower is better)
Translates to: LPLSLSLSPAISSPH*RTAVGGRGSGTGET
Trigger: AGTTTCTCCTGTTCCAGACCCCCTTCCACCCACTGCTGTCCTCCAGTGGGGAGACGAGATGGCGGGAGAGAGAGACAGAGAGAGAGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp GAGATGAGTGGACCTTCCCTGAGAGCAGGCCCTCATGGGAATGGTTaGAAGCCAAGCTCCAGCCCAGGGTTAGCGTCTCAGGCACACTGC +
Preference number: 5 (lower is better)
Translates to: EMSGPSLRAGPHGNG*KPSSSPGLASQAHC
Trigger: GCAGTGTGCCTGAGACGCTAACCCTGGGCTGGAGCTTGGCTTCCAACCATTCCCATGAGGGCCTGCTCTCAGGGAAGGTCCACTCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 90 bp GATCCAGGAGCCATGCACAGGGGACAGGCAGCCTGCTCCCCTTCCTaGGAGTCACACCTGATTTCTTCTACTCCTCGAAGGTGTGACCCC +
Preference number: 5 (lower is better)
Translates to: DPGAMHRGQAACSPS*ESHLISSTPRRCDP
Trigger: GGGGTCACACCTTCGAGGAGTAGAAGAAATCAGGTGTGACTCTCAGGAAGGGGAGCAGGCTGCCTGTCCCCTGTGCATGGCTCCTGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 90 bp TGGCTATGGGATGGCCCAACCAAATGCATGGGAGCAAAGACCCACTaGATGCTGCTCAGGTCGCTGAGGCCTCTGCAAATGGGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: WLWDGPTKCMGAKTH*MLLRSLRPLQMGRL
Trigger: GAGCCGGCCCATTTGCAGAGGCCTCAGCGACCTGAGCAGCATTCAGTGGGTCTTTGCTCCCATGCATTTGGTTGGGCCATCCCATAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 90 bp GGTCTCCATCCTGGAGAACCAGCAGTTATACCAGTGATGATGACATaGCCTGCCCTTGGGCCTCCGGATGGGCCCCTGCCCTCAGCAAGT +
Preference number: 5 (lower is better)
Translates to: GLHPGEPAVIPVMMT*PALGPPDGPLPSAS
Trigger: ACTTGCTGAGGGCAGGGGCCCATCCGGAGGCCCAAGGGCAGGTCATGTCATCATCACTGGTATAACTGCTGGTTCTCCAGGATGGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp TCTCTCTCCCGCCATCTCGTCTCCCCACTGGAGGACAGCAGTGGGTaGAAGGGGGTCTGGAACAGGAGAAACTGTGAAATGAGCCATCCG +
Preference number: 5 (lower is better)
Translates to: SLSRHLVSPLEDSSG*KGVWNRRNCEMSHP
Trigger: CGGATGGCTCATTTCACAGTTTCTCCTGTTCCAGACCCCCTTCCACCCACTGCTGTCCTCCAGTGGGGAGACGAGATGGCGGGAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS-3UTR CAA 90 bp AGCCTTCGTGAAGGGCTACCAGGGCAGAGCGGAGGAGCTGGAGGCCTTCTGTCCTGGTCACCACTTGCTTaGGATCCACGATGTCCACTA +
Preference number: 5 (lower is better)
Translates to: SLREGLPGQSGGAGGLLSWSPLA*DPRCPL
Trigger: TAGTGGACATCGTGGATCCAAAGCAAGTGGTGACCA...GGACAGAAGGCCTCCAGCTCCTCCGCTCTGCCCTGGTAGCCCTTCACGAAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS TCA 90 bp GCGCCTCAGTGTCCTCCCGAGAGAAGTCGAAGCCCCCAATGCACGTaGGTGTGTGAGGGTAAACTCAGCCGAAGCTTGCTCAACACTCAG +
Preference number: 5 (lower is better)
Translates to: APQCPPERSRSPQCT*VCEGKLSRSLLNTQ
Trigger: CTGAGTGTTGAGCAAGCTTCGGCTGAGTTTACCCTCACACACTCACGTGCATTGGGGGCTTCGACTTCTCTCGGGAGGACACTGAGGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 90 bp AATCTCTCGAGGTCATCTCCTCTGGGTTCAGCAGCTTGGACATCTTaGCCCGTCCTGGGCAGCTGGGTTGAGTGGACACATGATGGACGC +
Preference number: 5 (lower is better)
Translates to: NLSRSSPLGSAAWTS*PVLGSWVEWTHDGR
Trigger: GCGTCCATCATGTGTCCACTCAACCCAGCTGCCCAGGACGGGGCAAGATGTCCAAGCTGCTGAACCCAGAGGAGATGACCTCGAGAGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS GCA 90 bp GCCCCCAATGCACGTGAGTGTGTGAGGGTAAACTCAGCCGAAGCTTaGTCAACACTCAGAGTGCGGGGCGGTGTCCTTCCCTCCTCATTT +
Preference number: 5 (lower is better)
Translates to: APNARECVRVNSAEA*STLRVRGGVLPSSF
Trigger: AAATGAGGAGGGAAGGACACCGCCCCGCACTCTGAGTGTTGAGCAAGCTTCGGCTGAGTTTACCCTCACACACTCACGTGCATTGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp CATCTCGTCTCCCCACTGGAGGACAGCAGTGGGTGGAAGGGGGTCTaGAACAGGAGAAACTGTGAAATGAGCCATCCGGAAAGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: HLVSPLEDSSGWKGV*NRRNCEMSHPERSP
Trigger: TGGGCTCCTTTCCGGATGGCTCATTTCACAGTTTCTCCTGTTCCAGACCCCCTTCCACCCACTGCTGTCCTCCAGTGGGGAGACGAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp TTGAGAGATGAGTGGACCTTCCCTGAGAGCAGGCCCTCATGGGAATaGTTGGAAGCCAAGCTCCAGCCCAGGGTTAGCGTCTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: LRDEWTFPESRPSWE*LEAKLQPRVSVSGT
Trigger: TGTGCCTGAGACGCTAACCCTGGGCTGGAGCTTGGCTTCCAACCATTCCCATGAGGGCCTGCTCTCAGGGAAGGTCCACTCATCTCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 90 bp CCAAATGCATGGGAGCAAAGACCCACTGAATGCTGCTCAGGTCGCTaGGGCCTCTGCAAATGGGCCGGCTCACATGCAGACTGGGAATCT +
Preference number: 5 (lower is better)
Translates to: PNAWEQRPTECCSGR*GLCKWAGSHADWES
Trigger: AGATTCCCAGTCTGCATGTGAGCCGGCCCATTTGCAGAGGCCTCAGCGACCTGAGCAGCATTCAGTGGGTCTTTGCTCCCATGCATTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 90 bp GGAAAGAAAGCACGTGGGGGTCACCAGAGGACTCAAGTCCAGCTCTaGTGCCCTGTGACCTCACTAAGACCCTTGCCTGAGGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: GKKARGGHQRTQVQL*CPVTSLRPLPEVSI
Trigger: GATGGAGACCTCAGGCAAGGGTCTTAGTGAGGTCACAGGGCATCAGAGCTGGACTTGAGTCCTCTGGTGACCCCCACGTGCTTTCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 90 bp CCCCTCTGGCCATGTCATCATCTGATCTGCAAGAGGCGACCATGTTaGGTGATGAGGAGCATGCGACCCGGAGCCAGGCCTGGATTTATG +
Preference number: 5 (lower is better)
Translates to: PLWPCHHLICKRRPC*VMRSMRPGARPGFM
Trigger: CATAAATCCAGGCCTGGCTCCGGGTCGCATGCTCCTCATCACTCAACATGGTCGCCTCTTGCAGATCAGATGATGACATGGCCAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp GTGGGCATAGGAGTCGAAGTAATAATCTCTCGAGGTCATCTCCTCTaGGTTCAGCAGCTTGGACATCTTGCCCCGTCCTGGGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: VGIGVEVIISRGHLL*VQQLGHLAPSWAAG
Trigger: CCCAGCTGCCCAGGACGGGGCAAGATGTCCAAGCTGCTGAACCCAGAGGAGATGACCTCGAGAGATTATTACTTCGACTCCTATGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS-3UTR CAA 90 bp AAGGAGGAGACGGGGAGACGCGAATACGTTTCCACCCTCGGGGCCCAGCCACAGAGGTCTCGCACATTTTaGGCATTTGGCTTCATGGAT +
Preference number: 5 (lower is better)
Translates to: KEETGRREYVSTLGAQPQRSRTF*AFGFMD
Trigger: ATCCATGAAGCCAAATGCCAAAAATGTGCGAGACCT...CTGTGGCTGGGCCCCGAGGGTGGAAACGTATTCGCGTCTCCCCGTCTCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp AGCCACAGCACGCCAGGTCGCTCTTTGTTGGCAACACAAAGCCTTCGTGAAGGGTGCAAACGGTATTCTTaGGGACGGCACGGCAGATCG +
Preference number: 5 (lower is better)
Translates to: SHSTPGRSLLATQSLREGCKRYS*GRHGRS
Trigger: CGATCTGCCGTGCCGTCCCAAAGAATACCGTTTGCA...CCCTTCACGAAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGTGCTGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS CCA 90 bp AGGTATTTGAGAGATGAGTGGACCTTCCCTGAGAGCAGGCCCTCATaGGAATGGTTGGAAGCCAAGCTCCAGCCCAGGGTTAGCGTCTCA +
Preference number: 5 (lower is better)
Translates to: RYLRDEWTFPESRPS*EWLEAKLQPRVSVS
Trigger: TGAGACGCTAACCCTGGGCTGGAGCTTGGCTTCCAACCATTCCCATGAGGGCCTGCTCTCAGGGAAGGTCCACTCATCTCTCAAATACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp CAGCCCTTCCAGGGTAAACGAGCCGCGTGCCAGGATGGGACCATCTaGAAAAAGCCAGGTCAAGACCTCAGGGCTGGTTTAAGATCTTTC +
Preference number: 5 (lower is better)
Translates to: QPFQGKRAACQDGTI*KKPGQDLRAGLRSF
Trigger: GAAAGATCTTAAACCAGCCCTGAGGTCTTGACCTGGCTTTTTCCAGATGGTCCCATCCTGGCACGCGGCTCGTTTACCCTGGAAGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS-3UTR CAA 90 bp TCGGGGCCCAGCCACAGCACGCCAGGTCGCTCTTTGTTGGCAACACAAAGCCTTAGTACCACTTTGTCCTaGAACACGTGCTTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: SGPSHSTPGRSLLATQSLSTTLS*NTCLLW
Trigger: CCACAACAAGCACGTGTTCAAGGACAAAGTGGTACT...AAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGTGCTGTGGCTGGGCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp TGGAAGCAATCTGTCCTAGACACCCGCAGCATGCAAAACTCAGAAGACCCGGAGTTCTTGGCCCCTGCCTaGGCAGCGAACATGGAAAGG +
Preference number: 5 (lower is better)
Translates to: WKQSVLDTRSMQNSEDPEFLAPA*AANMER
Trigger: CCTTTCCATGTTCGCTGCCAAGGCAGGGGCCAAGAA...CTCCGGGTCTTCTGAGTTTTGCATGCTGCGGGTGTCTAGGACAGATTGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS TCA 90 bp AGGCCAGCGGCCTTCCACGAAATTGGGCTGCCTTTGCGAAAAGACTaGTGTCTAGTCACCACCCGTGATGGAGGGATTGATCTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: RPAAFHEIGLPLRKD*CLVTTRDGGIDLCA
Trigger: AGCACAGAGATCAATCCCTCCATCACGGGTGGTGACTAGACATCAGTCTTTTCGCAAAGGCAGCCCAATTTCGTGGAAGGCCGCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp CGAAGTAATAATCTCTCGAGGTCATCTCCTCTGGGTTCAGCAGCTTaGACATCTTGCCCCGTCCTGGGCAGCTGGGTTGAGTGGACACAT +
Preference number: 5 (lower is better)
Translates to: RSNNLSRSSPLGSAA*TSCPVLGSWVEWTH
Trigger: ATGTGTCCACTCAACCCAGCTGCCCAGGACGGGGCAAGATGTCCAAGCTGCTGAACCCAGAGGAGATGACCTCGAGAGATTATTACTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS-3UTR CAA 90 bp GTCCGTGGTACTATGCTCAAGGTTCAGAGCCACAGTCCAGTCAAAAGGAGACCATCCTGGGCAGCTGGGTaGAGTGGACACATGATGGAC +
Preference number: 5 (lower is better)
Translates to: VRGTMLKVQSHSPVKRRPSWAAG*SGHMMD
Trigger: GTCCATCATGTGTCCACTCAACCCAGCTGCCCAGGA...TGGTCTCCTTTTGACTGGACTGTGGCTCTGAACCTTGAGCATAGTACCACGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp TCGGGGCCCAGCCACAGCACGCCAGGTCGCTCTTTGTTGGCAACACAAAGCCTTGGTCTACCCACTTGGTaGTATATGCACGCATATACA +
Preference number: 5 (lower is better)
Translates to: SGPSHSTPGRSLLATQSLGLPTW*YMHAYT
Trigger: TGTATATGCGTGCATATACAACCAAGTGGGTAGACC...AAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGTGCTGTGGCTGGGCCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS CCA 90 bp AAATACTGGAGCATTCGATCCCAAACACCTTCTTGGCCCCTGCCTTaGCAGCGAACATGGAAAGGATCCCAGTACCACTCCCCACATCCA +
Preference number: 5 (lower is better)
Translates to: KYWSIRSQTPSWPLP*QRTWKGSQYHSPHP
Trigger: TGGATGTGGGGAGTGGTACTGGGATCCTTTCCATGTTCGCTGCCAAGGCAGGGGCCAAGAAGGTGTTTGGGATCGAATGCTCCAGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382622.4
ENST00000452611.6
CDS CCA 90 bp TTGCTCTTGTCACATCTGTCTCTTTCTCTGTGCCTGTCTCCACTCTaGGACGATGGTCTTCCTCCCTCCCTCTCTCTCTGTCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LLLSHLSLSLCLSPL*DDGLPPSLSLCLSL
Trigger: GAGAGAGAGACAGAGAGAGAGGGAGGGAGGAAGACCATCGTCCCAGAGTGGAGACAGGCACAGAGAAAGAGACAGATGTGACAAGAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS-3UTR CAA 90 bp CACCCGCAGCATGCAAAACTCAGAAGACCCGGAGAGTCACAGTTAAGGAGGAGAGGCATTGGTCACCACTaGCTTTGGATCCACGATGTC +
Preference number: 5 (lower is better)
Translates to: HPQHAKLRRPGESQLRRRGIGHH*LWIHDV
Trigger: GACATCGTGGATCCAAAGCAAGTGGTGACCAATGCC...TCTCCTCCTTAACTGTGACTCTCCGGGTCTTCTGAGTTTTGCATGCTGCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS TCA 90 bp TCAAGTCCAGCTCTGATGCCCTGTGACCTCACTAAGACCCTTGCCTaGGGTCTCCATCCTGGAGAACCAGCAGTTATACCAGTGATGATG +
Preference number: 5 (lower is better)
Translates to: SSPALMPCDLTKTLA*GLHPGEPAVIPVMM
Trigger: CATCATCACTGGTATAACTGCTGGTTCTCCAGGATGGAGACCTCAGGCAAGGGTCTTAGTGAGGTCACAGGGCATCAGAGCTGGACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 90 bp CTTTGGGACGGCACGGCAGATCGAGGTGAGAGTTCCTTTTCTCGTTaGTCTCTGCAGCTTCCCACGTGTGCTAACGCATTTTGTAGTCAT +
Preference number: 5 (lower is better)
Translates to: LWDGTADRGESSFSR*SLQLPTCANAFCSH
Trigger: ATGACTACAAAATGCGTTAGCACACGTGGGAAGCTGCAGAGAGCAACGAGAAAAGGAACTCTCACCTCGATCTGCCGTGCCGTCCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000543701.5
CDS GCA 90 bp ATGCTGCTCAGGTCGCTGAGGCCTCTGCAAATGGGCCGGCTCACATaGAGACTGGGAATCTCATTGTGGTTTGCCTTTCATTTTGACCAA +
Preference number: 5 (lower is better)
Translates to: MLLRSLRPLQMGRLT*RLGISLWFAFHFDQ
Trigger: TTGGTCAAAATGAAAGGCAAACCACAATGAGATTCCCAGTCTGCATGTGAGCCGGCCCATTTGCAGAGGCCTCAGCGACCTGAGCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 90 bp GTACTGTCTGTCTTCAATCGCTACCACGTACAAAGCTGCCCGGTCTaGAAACATAAGCCCTCCAGGTTTCAGCCACTTGTCCCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: VLSVFNRYHVQSCPV*KHKPSRFQPLVPGK
Trigger: TTTGCCAGGGACAAGTGGCTGAAACCTGGAGGGCTTATGTTTCCAGACCGGGCAGCTTTGTACGTGGTAGCGATTGAAGACAGACAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS CCA 90 bp TCACCACTTGCTTTGGATCCACGATGTCCACTAGAGGCTCCTTCATaGCCACGTCCCGGATGCAGGTCATGTCAAAGCCATAGACATTCT +
Preference number: 5 (lower is better)
Translates to: SPLALDPRCPLEAPS*PRPGCRSCQSHRHS
Trigger: AGAATGTCTATGGCTTTGACATGACCTGCATCCGGGACGTGGCCATGAAGGAGCCTCTAGTGGACATCGTGGATCCAAAGCAAGTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS-3UTR CAA 90 bp GTCCGTGGTACTATGCTCAAGGTTCAGAGCCACAGTCCAGTCAAAAGGAGACCACCAGGTCGCTCTTTGTaGGCAACACAAAGCCTTCGT +
Preference number: 5 (lower is better)
Translates to: VRGTMLKVQSHSPVKRRPPGRSL*ATQSLR
Trigger: ACGAAGGCTTTGTGTTGCCAACAAAGAGCGACCTGG...TGGTCTCCTTTTGACTGGACTGTGGCTCTGAACCTTGAGCATAGTACCACGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS TCA 90 bp GTAACCACCTGCACTGCCTCTGAAGCTGACCTTGGGGCTAAGCACTaGAAGGTCATGATGACATTGGAATGGTCTCAGGAAAGCCACAGT +
Preference number: 5 (lower is better)
Translates to: VTTCTASEADLGAKH*KVMMTLEWSQESHS
Trigger: ACTGTGGCTTTCCTGAGACCATTCCAATGTCATCATGACCTTTCAGTGCTTAGCCCCAAGGTCAGCTTCAGAGGCAGTGCAGGTGGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 90 bp GAAGTCCTTGTACTGTCTGTCTTCAATCGCTACCACGTACAAAGCTaGCCGGTCTGGAAACATAAGCCCTCCAGGTTTCAGCCACTTGTC +
Preference number: 5 (lower is better)
Translates to: EVLVLSVFNRYHVQS*PVWKHKPSRFQPLV
Trigger: GACAAGTGGCTGAAACCTGGAGGGCTTATGTTTCCAGACCGGGCAGCTTTGTACGTGGTAGCGATTGAAGACAGACAGTACAAGGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS-3UTR CAA 90 bp AAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGCGCACGAGCAGCTTGGACATCTaGCCCCGTCCTGGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: KSNRISSESNIYSRHTRTSSLDI*PRPGQL
Trigger: CAGCTGCCCAGGACGGGGCAAGATGTCCAAGCTGCT...CGTGCGCGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp GCAGATCGAGGTGAGAGTTCCTTTTCTCGTTGCTCTCTGCAGCTTCCCACGTGTTCCTTGAACACGTGCTaGTTGTGGTACATGGAGTTC +
Preference number: 5 (lower is better)
Translates to: ADRGESSFSRCSLQLPTCSLNTC*LWYMEF
Trigger: GAACTCCATGTACCACAACAAGCACGTGTTCAAGGA...ACACGTGGGAAGCTGCAGAGAGCAACGAGAAAAGGAACTCTCACCTCGATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp GCAGATCGAGGTGAGAGTTCCTTTTCTCGTTGCTCTCTGCAGCTTCCCACGTGTCCTAGGTCTACCCACTaGGTTGTATATGCACGCATA +
Preference number: 5 (lower is better)
Translates to: ADRGESSFSRCSLQLPTCPRSTH*VVYARI
Trigger: TATGCGTGCATATACAACCAAGTGGGTAGACCTAGG...ACACGTGGGAAGCTGCAGAGAGCAACGAGAAAAGGAACTCTCACCTCGATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS GCA 90 bp ACGGCACGGCAGATCGAGGTGAGAGTTCCTTTTCTCGTTGCTCTCTaGAGCTTCCCACGTGTGCTAACGCATTTTGTAGTCATTAGATAC +
Preference number: 5 (lower is better)
Translates to: TARQIEVRVPFLVAL*SFPRVLTHFVVIRY
Trigger: GTATCTAATGACTACAAAATGCGTTAGCACACGTGGGAAGCTGCAGAGAGCAACGAGAAAAGGAACTCTCACCTCGATCTGCCGTGCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000543701.5
CDS CCA 90 bp CCTCTGCAAATGGGCCGGCTCACATGCAGACTGGGAATCTCATTGTaGTTTGCCTTTCATTTTGACCAAGATGAATGCTTGTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PLQMGRLTCRLGISL*FAFHFDQDECLCSS
Trigger: GCTGGAGCACAAGCATTCATCTTGGTCAAAATGAAAGGCAAACCACAATGAGATTCCCAGTCTGCATGTGAGCCGGCCCATTTGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS-3UTR CAA 90 bp AAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGCGCACGTCTGGGTTCAGCAGCTaGGACATCTTGCCCCGTCCT +
Preference number: 5 (lower is better)
Translates to: KSNRISSESNIYSRHTRTSGFSS*DILPRP
Trigger: AGGACGGGGCAAGATGTCCAAGCTGCTGAACCCAGA...CGTGCGCGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp GTGTGTTTATTGAGCGCCCACGGAGTCCGTGGTACTATGCTCAAGGTTCAGAGCATGTTGTCCAAGTGGTaGGCCTTAATGATCTTCTCT +
Preference number: 5 (lower is better)
Translates to: VCLLSAHGVRGTMLKVQSMLSKW*ALMIFS
Trigger: AGAGAAGATCATTAAGGCCAACCACTTGGACAACAT...GCTCTGAACCTTGAGCATAGTACCACGGACTCCGTGGGCGCTCAATAAACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp GAAGCAATCTGTCCTAGACACCCGCAGCATGCAAAACTCAGAAGACCCGGAGAGTTTATCAAACAGGCATaGGTCACCACTTGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: EAICPRHPQHAKLRRPGEFIKQA*VTTCFG
Trigger: TCCAAAGCAAGTGGTGACCAATGCCTGTTTGATAAA...CTCTCCGGGTCTTCTGAGTTTTGCATGCTGCGGGTGTCTAGGACAGATTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp AAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGCGCACGCCAGGTTTCAGCCACTaGTCCCTGGCAAAGATCACC +
Preference number: 5 (lower is better)
Translates to: KSNRISSESNIYSRHTRTPGFSH*SLAKIT
Trigger: GGTGATCTTTGCCAGGGACAAGTGGCTGAAACCTGG...CGTGCGCGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp GTGTTTATTGAGCGCCCACGGAGTCCGTGGTACTATGCTCAAGGTTCAGAGCCAATCTTCAAGGCAGAGTaGAAAACTCTGGTTTTCAAG +
Preference number: 5 (lower is better)
Translates to: VFIERPRSPWYYAQGSEPIFKAE*KTLVFK
Trigger: CTTGAAAACCAGAGTTTTCAACTCTGCCTTGAAGAT...TGGCTCTGAACCTTGAGCATAGTACCACGGACTCCGTGGGCGCTCAATAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS GCA 90 bp CACCCTTTATATGGGTTAATTTGGGTCTTATCTCCTCAGCTGGACTaGCCCACCTTCAATCATTCAGAGCACAGATCACCCAAGGGATTA +
Preference number: 5 (lower is better)
Translates to: HPLYGLIWVLSPQLD*PTFNHSEHRSPKGL
Trigger: TAATCCCTTGGGTGATCTGTGCTCTGAATGATTGAAGGTGGGGCAGTCCAGCTGAGGAGATAAGACCCAAATTAACCCATATAAAGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261252.4
CDS-3UTR CAA 90 bp GTCAAAAGGAGACCAGAACTAGTACAGAGAATGTTTCATAGCTGCTTAACATCTCACATGATGGACGCATaGCACGGGCTTAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: VKRRPELVQRMFHSCLTSHMMDA*HGLSRD
Trigger: GTCCCTGCTAAGCCCGTGCAATGCGTCCATCATGTG...AGATGTTAAGCAGCTATGAAACATTCTCTGTACTAGTTCTGGTCTCCTTTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp CGTGGTACTATGCTCAAGGTTCAGAGCCACAGTCCAGTCAAAAGGAGACCAGAAAATATGGTGATGATGTaGTCCAAGTGGTTGGCCTTA +
Preference number: 5 (lower is better)
Translates to: RGTMLKVQSHSPVKRRPENMVMM*SKWLAL
Trigger: TAAGGCCAACCACTTGGACAACATCATCACCATATT...TTCTGGTCTCCTTTTGACTGGACTGTGGCTCTGAACCTTGAGCATAGTACCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp TCCGTGGTACTATGCTCAAGGTTCAGAGCCACAGTCCAGTCAAAAGGAGACCAGTGGATTTTGAAGTCCTaGTACTGTCTGTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: SVVLCSRFRATVQSKGDQWILKS*YCLSSI
Trigger: GATTGAAGACAGACAGTACAAGGACTTCAAAATCCA...CTGGTCTCCTTTTGACTGGACTGTGGCTCTGAACCTTGAGCATAGTACCACGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS TCA 90 bp TCTAGCCTGGAAACGCTGCCACAGCCAAAGCAACAGAATTTAAGTTaGCCGACTTGCCCTCTAAAGAAAACAAGAAGGAGATGTTCCCAT +
Preference number: 5 (lower is better)
Translates to: SSLETLPQPKQQNLS*PTCPLKKTRRRCSH
Trigger: ATGGGAACATCTCCTTCTTGTTTTCTTTAGAGGGCAAGTCGGTCAACTTAAATTCTGTTGCTTTGGCTGTGGCAGCGTTTCCAGGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS-3UTR CAA 90 bp GTCAAAAGGAGACCAGAACTAGTACAGAGAATGTTTCATAGCTGCTTAACATCTACGCCAGGTCGCTCTTaGTTGGCAACACAAAGCCTT +
Preference number: 5 (lower is better)
Translates to: VKRRPELVQRMFHSCLTSTPGRS*LATQSL
Trigger: AAGGCTTTGTGTTGCCAACAAAGAGCGACCTGGCGT...AGATGTTAAGCAGCTATGAAACATTCTCTGTACTAGTTCTGGTCTCCTTTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp TCAAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGCGCAACATCCAGTACCACTTaGTCCTTGAACACGTGCTTG +
Preference number: 5 (lower is better)
Translates to: SKATESPLRVIYILGTRATSSTT*SLNTCL
Trigger: CAAGCACGTGTTCAAGGACAAAGTGGTACTGGATGT...TGCGCGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp CTATTCAAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGTCTCATGTGTGTTTATaGAGCGCCCACGGAGTCCGT +
Preference number: 5 (lower is better)
Translates to: LFKSNRISSESNIYSRHTSHVCL*SAHGVR
Trigger: ACGGACTCCGTGGGCGCTCAATAAACACACATGAGA...CGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTTGAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp CTATTCAAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGTTGAACACGTGCTTGTaGTGGTACATGGAGTTCCGG +
Preference number: 5 (lower is better)
Translates to: LFKSNRISSESNIYSRHTLNTCL*WYMEFR
Trigger: CCGGAACTCCATGTACCACAACAAGCACGTGTTCAA...CGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTTGAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp TCAAAAGCAACAGAATCTCCTCTGAGAGTAATATATATTCTAGGCACACGCGCAGCACATTTTTGGCATTaGGCTTCATGGATATGGTCC +
Preference number: 5 (lower is better)
Translates to: SKATESPLRVIYILGTRAAHFWH*ASWIWS
Trigger: GGACCATATCCATGAAGCCAAATGCCAAAAATGTGC...TGCGCGTGTGCCTAGAATATATATTACTCTCAGAGGAGATTCTGTTGCTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS-3UTR CAA 90 bp ACACGCACACCACCGCACACACAGATAATCTGGCTTATGCTATCAAAGATGCTACGCATATACAGGTGTTaGTGGGTAAATATCAACTAT +
Preference number: 5 (lower is better)
Translates to: TRTPPHTQIIWLMLSKMLRIYRC*WVNINY
Trigger: ATAGTTGATATTTACCCACAAACACCTGTATATGCG...TAGCATCTTTGATAGCATAAGCCAGATTATCTGTGTGTGCGGTGGTGTGCGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS GCA 72 bp GGCGGCGGCGGCGGCGGTCGCGGATCCTCTCCAGGCTaGTCGCAAAGTCCGGCCGGCCGGAGGCAGCCGCCA +
Preference number: 6 (lower is better)
Translates to: GGGGGGRGSSPG*SQSPAGRRQPP
Trigger: TGGCGGCTGCCTCCGGCCGGCCGGACTTTGCGAGCAGCCTGGAGAGGATCCGCGACCGCCGCCGCCGCCGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382622.4
CDS GCA 72 bp GCACACTGCCAGGGGTTCTGGACATGGAGGGGCAGCTaGCAAGAGCCGTCCTCACCTCCGGAGCCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: AHCQGFWTWRGS*QEPSSPPEPAL
Trigger: GAGAGCCGGCTCCGGAGGTGAGGACGGCTCTTGGCAGCTGCCCCTCCATGTCCAGAACCCCTGGCAGTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp CCCACCAAGGCCGGCACTGAGACGGGGCCTCGGTGCTaGGAAAGAAAGCACGTGGGGGTCACCAGAGGACTC +
Preference number: 6 (lower is better)
Translates to: PTKAGTETGPRC*ERKHVGVTRGL
Trigger: GAGTCCTCTGGTGACCCCCACGTGCTTTCTTTCCCAGCACCGAGGCCCCGTCTCAGTGCCGGCCTTGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp GATCGCGCCAAGTCACCGCAGCTGGAAGGCGCCAAGTaGGAGCCTCCTCCTGACAGCTCCTTGGCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: DRAKSPQLEGAK*EPPPDSSLAGA
Trigger: GGCTCCAGCCAAGGAGCTGTCAGGAGGAGGCTCCCACTTGGCGCCTTCCAGCTGCGGTGACTTGGCGCGATC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp GCGGGAGGCAGACAGATCGCGCCAAGTCACCGCAGCTaGAAGGCGCCAAGTGGGAGCCTCCTCCTGACAGCT +
Preference number: 6 (lower is better)
Translates to: AGGRQIAPSHRS*KAPSGSLLLTA
Trigger: AGCTGTCAGGAGGAGGCTCCCACTTGGCGCCTTCCAGCTGCGGTGACTTGGCGCGATCTGTCTGCCTCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CAA 72 bp CCGTGGGGGACGCGGGAAGGCAGATCCAAGCCAGAGTaGCGAGCCTCCCTCGACATGATCCTCCCCACCGCA +
Preference number: 6 (lower is better)
Translates to: PWGTREGRSKPE*RASLDMILPTA
Trigger: TGCGGTGGGGAGGATCATGTCGAGGGAGGCTCGCAACTCTGGCTTGGATCTGCCTTCCCGCGTCCCCCACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 72 bp ACCATGCTCAGCCCTGTCCCCCACCAAGGCCGGCACTaGGACGGGGCCTCGGTGCTGGGAAAGAAAGCACGT +
Preference number: 6 (lower is better)
Translates to: TMLSPVPHQGRH*DGASVLGKKAR
Trigger: ACGTGCTTTCTTTCCCAGCACCGAGGCCCCGTCTCAGTGCCGGCCTTGGTGGGGGACAGGGCTGAGCATGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 72 bp GCACTGAGGGAGTTTCTGACGCCTCTGGCCACGCCTTaGGGAAGGGTGAGGGCACCTACGGGGTCAGAAGGG +
Preference number: 6 (lower is better)
Translates to: ALREFLTPLATP*GRVRAPTGSEG
Trigger: CCCTTCTGACCCCGTAGGTGCCCTCACCCTTCCTCAAGGCGTGGCCAGAGGCGTCAGAAACTCCCTCAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 72 bp CCAAGCTCCAGCCCAGGGTTAGCGTCTCAGGCACACTaGCAGGGGTTCTGGACATGGAGGGGCAGCTGCCAA +
Preference number: 6 (lower is better)
Translates to: PSSSPGLASQAH*QGFWTWRGSCQ
Trigger: TTGGCAGCTGCCCCTCCATGTCCAGAACCCCTGGCAGTGTGCCTGAGACGCTAACCCTGGGCTGGAGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp CGGCTCTCTTACAGAGGCTGGCCTGTGCTAAGGCCCTaGGCTCTACTCACCTCCACACTTGGGGGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: RLSYRGWPVLRP*ALLTSTLGGPS
Trigger: TGAGGGGCCCCCAAGTGTGGAGGTGAGTAGAGCCCAGGGCCTTAGCACAGGCCAGCCTCTGTAAGAGAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp CCAGGGTTAGCGTCTCAGGCACACTGCCAGGGGTTCTaGACATGGAGGGGCAGCTGCCAAGAGCCGTCCTCA +
Preference number: 6 (lower is better)
Translates to: PGLASQAHCQGF*TWRGSCQEPSS
Trigger: TGAGGACGGCTCTTGGCAGCTGCCCCTCCATGTCCAGAACCCCTGGCAGTGTGCCTGAGACGCTAACCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp CAGAGAATGGCAGGAGGCAGTACGTCCTCCCCACCGTaGGGGACGCGGGAAGGCAGATCCAAGCCAGAGTTG +
Preference number: 6 (lower is better)
Translates to: QRMAGGSTSSPP*GTREGRSKPEL
Trigger: CAACTCTGGCTTGGATCTGCCTTCCCGCGTCCCCCACGGTGGGGAGGACGTACTGCCTCCTGCCATTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CAA 72 bp GGCACTGAGGGAGTTTCTGACGCCTCTGGCCACGCCTaGAGGAAGGGTGAGGGCACCTACGGGGTCAGAAGG +
Preference number: 6 (lower is better)
Translates to: GTEGVSDASGHA*RKGEGTYGVRR
Trigger: CCTTCTGACCCCGTAGGTGCCCTCACCCTTCCTCAAGGCGTGGCCAGAGGCGTCAGAAACTCCCTCAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CAA 90 bp GCCTTGAGGAAGGGTGAGGGCACCTACGGGGTCAGAAGGGGTCACTaGGTTAGAGCTGCATCCAAGGAGGCCGACTCCAGCCAGGGTGCA +
Preference number: 6 (lower is better)
Translates to: ALRKGEGTYGVRRGH*VRAASKEADSSQGA
Trigger: TGCACCCTGGCTGGAGTCGGCCTCCTTGGATGCAGCTCTAACCAAGTGACCCCTTCTGACCCCGTAGGTGCCCTCACCCTTCCTCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp CCAGGCCCTCTGTCATCAGGCTGGGCAAAGCTGCCTTaGGAGAGCCAGGGGATAGGTAGGAGGCTTCCCAGA +
Preference number: 6 (lower is better)
Translates to: PGPLSSGWAKLP*ESQGIGRRLPR
Trigger: TCTGGGAAGCCTCCTACCTATCCCCTGGCTCTCCCAAGGCAGCTTTGCCCAGCCTGATGACAGAGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp GAGCATGCGACCCGGAGCCAGGCCTGGATTTATGCCTaGCCACTGCCCTTCCTAACTGCGCCTCAGTGTCCT +
Preference number: 6 (lower is better)
Translates to: EHATRSQAWIYA*PLPFLTAPQCP
Trigger: AGGACACTGAGGCGCAGTTAGGAAGGGCAGTGGCCAGGCATAAATCCAGGCCTGGCTCCGGGTCGCATGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp AGGGTGAGGGCACCTACGGGGTCAGAAGGGGTCACTTaGTTAGAGCTGCATCCAAGGAGGCCGACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RVRAPTGSEGVT*LELHPRRPTPA
Trigger: GGCTGGAGTCGGCCTCCTTGGATGCAGCTCTAACCAAGTGACCCCTTCTGACCCCGTAGGTGCCCTCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 72 bp GCACTGAGGGAGTTTCTGACGCCTCTGGCCACGCCTTaGGGAAGGGTGAGGGCACCCCAAACACCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: ALREFLTPLATP*GRVRAPQTPSW
Trigger: CCAAGAAGGTGTTTGGGGTGCCCTCACCCTTCCTCAAGGCGTGGCCAGAGGCGTCAGAAACTCCCTCAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261252.4
CDS TCA 72 bp AAGTCAGGCTTGGAGGAGGAATGCTGCCCTGCTGGGTaGCTTAGGAGCAGACCTCTGGAGGCAGCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: KSGLEEECCPAG*LRSRPLEAAGG
Trigger: GCCACCTGCTGCCTCCAGAGGTCTGCTCCTAAGTCACCCAGCAGGGCAGCATTCCTCCTCCAAGCCTGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 72 bp TCCGGATGGGCCCCTGCCCTCAGCAAGTGCCTCGGCTaGGAACGTCACAGCTTTTCCTGGTCAAAGCTGCAC +
Preference number: 6 (lower is better)
Translates to: SGWAPALSKCLG*ERHSFSWSKLH
Trigger: GTGCAGCTTTGACCAGGAAAAGCTGTGACGTTCTCAGCCGAGGCACTTGCTGAGGGCAGGGGCCCATCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 72 bp CCTGGAGAACCAGCAGTTATACCAGTGATGATGACATaGCCTGCCCTTGGGCCTCCGGATGGGCCCCTGCCC +
Preference number: 6 (lower is better)
Translates to: PGEPAVIPVMMT*PALGPPDGPLP
Trigger: GGGCAGGGGCCCATCCGGAGGCCCAAGGGCAGGTCATGTCATCATCACTGGTATAACTGCTGGTTCTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 72 bp ACCGCAGCCCAGCCCTTCCAGGGTAAACGAGCCGCGTaGCAGGATGGGACCATCTGGAAAAAGCCAGGTCAA +
Preference number: 6 (lower is better)
Translates to: TAAQPFQGKRAA*QDGTIWKKPGQ
Trigger: TTGACCTGGCTTTTTCCAGATGGTCCCATCCTGGCACGCGGCTCGTTTACCCTGGAAGGGCTGGGCTGCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp CTGAGACGGGGCCTCGGTGCTGGGAAAGAAAGCACGTaGGGGTCACCAGAGGACTCAAGTCCAGCTCTGATG +
Preference number: 6 (lower is better)
Translates to: LRRGLGAGKEST*GSPEDSSPALM
Trigger: CATCAGAGCTGGACTTGAGTCCTCTGGTGACCCCCACGTGCTTTCTTTCCCAGCACCGAGGCCCCGTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp GGACCTTCCCTGAGAGCAGGCCCTCATGGGAATGGTTaGAAGCCAAGCTCCAGCCCAGGGTTAGCGTCTCAG +
Preference number: 6 (lower is better)
Translates to: GPSLRAGPHGNG*KPSSSPGLASQ
Trigger: CTGAGACGCTAACCCTGGGCTGGAGCTTGGCTTCCAACCATTCCCATGAGGGCCTGCTCTCAGGGAAGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp GAGTGGACCTTCCCTGAGAGCAGGCCCTCATGGGAATaGTTGGAAGCCAAGCTCCAGCCCAGGGTTAGCGTC +
Preference number: 6 (lower is better)
Translates to: EWTFPESRPSWE*LEAKLQPRVSV
Trigger: GACGCTAACCCTGGGCTGGAGCTTGGCTTCCAACCATTCCCATGAGGGCCTGCTCTCAGGGAAGGTCCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CAA 72 bp AAGGGTGAGGGCACCTACGGGGTCAGAAGGGGTCACTaGGTTAGAGCTGCATCCAAGGAGGCCGACTCCAGC +
Preference number: 6 (lower is better)
Translates to: KGEGTYGVRRGH*VRAASKEADSS
Trigger: GCTGGAGTCGGCCTCCTTGGATGCAGCTCTAACCAAGTGACCCCTTCTGACCCCGTAGGTGCCCTCACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CAA 90 bp TGGGTTCAGCAGCTTGGACATCTTGCCCCGTCCTGGGCAGCTGGGTaGAGTGGACACATGATGGACGCATTGCACGGGCTTAGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: WVQQLGHLAPSWAAG*SGHMMDALHGLSRD
Trigger: GTCCCTGCTAAGCCCGTGCAATGCGTCCATCATGTGTCCACTCAACCCAGCTGCCCAGGACGGGGCAAGATGTCCAAGCTGCTGAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS TCA 72 bp GCACGTGGGGGTCACCAGAGGACTCAAGTCCAGCTCTaGTGCCCTGTGACCTCACTAAGACCCTTGCCTGAG +
Preference number: 6 (lower is better)
Translates to: ARGGHQRTQVQL*CPVTSLRPLPE
Trigger: CTCAGGCAAGGGTCTTAGTGAGGTCACAGGGCATCAGAGCTGGACTTGAGTCCTCTGGTGACCCCCACGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 72 bp GCACGTGAGTGTGTGAGGGTAAACTCAGCCGAAGCTTaGTCAACACTCAGAGTGCGGGGCGGTGTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: ARECVRVNSAEA*STLRVRGGVLP
Trigger: GGGAAGGACACCGCCCCGCACTCTGAGTGTTGAGCAAGCTTCGGCTGAGTTTACCCTCACACACTCACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp GTGAGGGCACCCCAAACACCTTCTTGGCCCCTGCCTTaGCAGCGAACATGGAAAGGATCCCAGTACCACTCC +
Preference number: 6 (lower is better)
Translates to: VRAPQTPSWPLP*QRTWKGSQYHS
Trigger: GGAGTGGTACTGGGATCCTTTCCATGTTCGCTGCCAAGGCAGGGGCCAAGAAGGTGTTTGGGGTGCCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261252.4
CDS CCA 72 bp GCGTGCTCACCCCAAACACCTTCTTGGCCCCTGCCTTaGCAGCGAACATGGAAAGGATCCCAGTACCACTCC +
Preference number: 6 (lower is better)
Translates to: ACSPQTPSWPLP*QRTWKGSQYHS
Trigger: GGAGTGGTACTGGGATCCTTTCCATGTTCGCTGCCAAGGCAGGGGCCAAGAAGGTGTTTGGGGTGAGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CAA 72 bp GGTGAGGGCACCCCAAACACCTTCTTGGCCCCTGCCTaGGCAGCGAACATGGAAAGGATCCCAGTACCACTC +
Preference number: 6 (lower is better)
Translates to: GEGTPNTFLAPA*AANMERIPVPL
Trigger: GAGTGGTACTGGGATCCTTTCCATGTTCGCTGCCAAGGCAGGGGCCAAGAAGGTGTTTGGGGTGCCCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261252.4
CDS CAA 72 bp CAGACTACCCCCAGGCCTCGGGCAGGGACCATTCCCTaGAGAAGTACTCGCAAAGGGGCACTGAGGGAGTTT +
Preference number: 6 (lower is better)
Translates to: QTTPRPRAGTIP*RSTRKGALREF
Trigger: AAACTCCCTCAGTGCCCCTTTGCGAGTACTTCTCAAGGGAATGGTCCCTGCCCGAGGCCTGGGGGTAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261252.4
ENST00000543701.5
CDS CAA 72 bp GGCGTGCTCACCCCAAACACCTTCTTGGCCCCTGCCTaGGCAGCGAACATGGAAAGGATCCCAGTACCACTC +
Preference number: 6 (lower is better)
Translates to: GVLTPNTFLAPA*AANMERIPVPL
Trigger: GAGTGGTACTGGGATCCTTTCCATGTTCGCTGCCAAGGCAGGGGCCAAGAAGGTGTTTGGGGTGAGCACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 72 bp AGGTCATCTCCTCTGGGTTCAGCAGCTTGGACATCTTaGCCCGTCCTGGGCAGCTGGGTTGAGTGGACACAT +
Preference number: 6 (lower is better)
Translates to: RSSPLGSAAWTS*PVLGSWVEWTH
Trigger: ATGTGTCCACTCAACCCAGCTGCCCAGGACGGGGCAAGATGTCCAAGCTGCTGAACCCAGAGGAGATGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS CCA 72 bp AATCTCTCGAGGTCATCTCCTCTGGGTTCAGCAGCTTaGACATCTTGCCCCGTCCTGGGCAGCTGGGTTGAG +
Preference number: 6 (lower is better)
Translates to: NLSRSSPLGSAA*TSCPVLGSWVE
Trigger: CTCAACCCAGCTGCCCAGGACGGGGCAAGATGTCCAAGCTGCTGAACCCAGAGGAGATGACCTCGAGAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS CAA 72 bp GCCATGTCATCATCTGATCTGCAAGAGGCGACCATGTaGAGTGATGAGGAGCATGCGACCCGGAGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: AMSSSDLQEATM*SDEEHATRSQA
Trigger: GGCCTGGCTCCGGGTCGCATGCTCCTCATCACTCAACATGGTCGCCTCTTGCAGATCAGATGATGACATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CAA 90 bp CCCCCTCTGGCCATGTCATCATCTGATCTGCAAGAGGCGACCATGTaGAGTGATGAGGAGCATGCGACCCGGAGCCAGGCCTGGATTTAT +
Preference number: 6 (lower is better)
Translates to: PPLAMSSSDLQEATM*SDEEHATRSQAWIY
Trigger: ATAAATCCAGGCCTGGCTCCGGGTCGCATGCTCCTCATCACTCAACATGGTCGCCTCTTGCAGATCAGATGATGACATGGCCAGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 72 bp TGTCCTCCCGAGAGAAGTCGAAGCCCCCAATGCACGTaGGTGTGTGAGGGTAAACTCAGCCGAAGCTTGCTC +
Preference number: 6 (lower is better)
Translates to: CPPERSRSPQCT*VCEGKLSRSLL
Trigger: GAGCAAGCTTCGGCTGAGTTTACCCTCACACACTCACGTGCATTGGGGGCTTCGACTTCTCTCGGGAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 72 bp CCATGTCATCATCTGATCTGCAAGAGGCGACCATGTTaGGTGATGAGGAGCATGCGACCCGGAGCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: PCHHLICKRRPC*VMRSMRPGARP
Trigger: AGGCCTGGCTCCGGGTCGCATGCTCCTCATCACTCAACATGGTCGCCTCTTGCAGATCAGATGATGACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 72 bp CAGAGATTCAAACCAGAGCTCCCCCGAGTAACCACCTaGACTGCCTCTGAAGCTGACCTTGGGGCTAAGCAC +
Preference number: 6 (lower is better)
Translates to: QRFKPELPRVTT*TASEADLGAKH
Trigger: GTGCTTAGCCCCAAGGTCAGCTTCAGAGGCAGTGCAGGTGGTTACTCGGGGGAGCTCTGGTTTGAATCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp CAGGGTAAACGAGCCGCGTGCCAGGATGGGACCATCTaGAAAAAGCCAGGTCAAGACCTCAGGGCTGGTTTA +
Preference number: 6 (lower is better)
Translates to: QGKRAACQDGTI*KKPGQDLRAGL
Trigger: TAAACCAGCCCTGAGGTCTTGACCTGGCTTTTTCCAGATGGTCCCATCCTGGCACGCGGCTCGTTTACCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 72 bp TGTCCACTAGAGGCTCCTTCATGGCCACGTCCCGGATaGAGGTCATGTCAAAGCCATAGACATTCTCCCACC +
Preference number: 6 (lower is better)
Translates to: CPLEAPSWPRPG*RSCQSHRHSPT
Trigger: GGTGGGAGAATGTCTATGGCTTTGACATGACCTGCATCCGGGACGTGGCCATGAAGGAGCCTCTAGTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS CCA 72 bp AGGCAGCGTGCAGGTCCTGTGGAAGAAATAGACGTGTaGGAACTGTGCCCTCCCAGGACCCTGTTTTCTAGA +
Preference number: 6 (lower is better)
Translates to: RQRAGPVEEIDV*ELCPPRTLFSR
Trigger: TCTAGAAAACAGGGTCCTGGGAGGGCACAGTTCCCACACGTCTATTTCTTCCACAGGACCTGCACGCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261252.4
CDS CCA 72 bp GCTTTGGATCCACGATGTCCACTAGAGGCTCCTTCATaGCCACGTCCCGGATGCAGGTCATGTCAAAGCCAT +
Preference number: 6 (lower is better)
Translates to: ALDPRCPLEAPS*PRPGCRSCQSH
Trigger: ATGGCTTTGACATGACCTGCATCCGGGACGTGGCCATGAAGGAGCCTCTAGTGGACATCGTGGATCCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS CCA 72 bp AGCATTCGATCCCAAACACCTTCTTGGCCCCTGCCTTaGCAGCGAACATGGAAAGGATCCCAGTACCACTCC +
Preference number: 6 (lower is better)
Translates to: SIRSQTPSWPLP*QRTWKGSQYHS
Trigger: GGAGTGGTACTGGGATCCTTTCCATGTTCGCTGCCAAGGCAGGGGCCAAGAAGGTGTTTGGGATCGAATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382622.4
ENST00000452611.6
CDS CAA 72 bp GAGCATTCGATCCCAAACACCTTCTTGGCCCCTGCCTaGGCAGCGAACATGGAAAGGATCCCAGTACCACTC +
Preference number: 6 (lower is better)
Translates to: EHSIPNTFLAPA*AANMERIPVPL
Trigger: GAGTGGTACTGGGATCCTTTCCATGTTCGCTGCCAAGGCAGGGGCCAAGAAGGTGTTTGGGATCGAATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382622.4
ENST00000452611.6
CDS CAA 90 bp GAAATACTGGAGCATTCGATCCCAAACACCTTCTTGGCCCCTGCCTaGGCAGCGAACATGGAAAGGATCCCAGTACCACTCCCCACATCC +
Preference number: 6 (lower is better)
Translates to: EILEHSIPNTFLAPA*AANMERIPVPLPTS
Trigger: GGATGTGGGGAGTGGTACTGGGATCCTTTCCATGTTCGCTGCCAAGGCAGGGGCCAAGAAGGTGTTTGGGATCGAATGCTCCAGTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382622.4
ENST00000452611.6
CDS TCA 72 bp GCTCTGATGCCCTGTGACCTCACTAAGACCCTTGCCTaGGGTCTCCATCCTGGAGAACCAGCAGTTATACCA +
Preference number: 6 (lower is better)
Translates to: ALMPCDLTKTLA*GLHPGEPAVIP
Trigger: TGGTATAACTGCTGGTTCTCCAGGATGGAGACCTCAGGCAAGGGTCTTAGTGAGGTCACAGGGCATCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 72 bp AGGTCGCTGAGGCCTCTGCAAATGGGCCGGCTCACATaGAGACTGGGAATCTCATTGTGGTTTGCCTTTCAT +
Preference number: 6 (lower is better)
Translates to: RSLRPLQMGRLT*RLGISLWFAFH
Trigger: ATGAAAGGCAAACCACAATGAGATTCCCAGTCTGCATGTGAGCCGGCCCATTTGCAGAGGCCTCAGCGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CCA 72 bp GGAGTCGAAGTAATAATCTCTCGAGGTCATCTCCTCTaGGTTCAGCAGCTTGGACATCTTGCCCCGTCCTGG +
Preference number: 6 (lower is better)
Translates to: GVEVIISRGHLL*VQQLGHLAPSW
Trigger: CCAGGACGGGGCAAGATGTCCAAGCTGCTGAACCCAGAGGAGATGACCTCGAGAGATTATTACTTCGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS CCA 72 bp GTCTTCAATCGCTACCACGTACAAAGCTGCCCGGTCTaGAAACATAAGCCCTCCAGGTTTCAGCCACTTGTC +
Preference number: 6 (lower is better)
Translates to: VFNRYHVQSCPV*KHKPSRFQPLV
Trigger: GACAAGTGGCTGAAACCTGGAGGGCTTATGTTTCCAGACCGGGCAGCTTTGTACGTGGTAGCGATTGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS CAA 90 bp CGTTGCGCTGTATCTTTATCAAACAGGCATTGGTCACCACTTGCTTaGGATCCACGATGTCCACTAGAGGCTCCTTCATGGCCACGTCCC +
Preference number: 6 (lower is better)
Translates to: RCAVSLSNRHWSPLA*DPRCPLEAPSWPRP
Trigger: GGGACGTGGCCATGAAGGAGCCTCTAGTGGACATCGTGGATCCAAAGCAAGTGGTGACCAATGCCTGTTTGATAAAGATACAGCGCAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261252.4
CDS CAA 90 bp GGCTCACATGCAGACTGGGAATCTCATTGTGGTTTGCCTTTCATTTaGACCAAGATGAATGCTTGTGCTCCAGCCCTGGGCCCACTGCAT +
Preference number: 6 (lower is better)
Translates to: GSHADWESHCGLPFI*TKMNACAPALGPLH
Trigger: ATGCAGTGGGCCCAGGGCTGGAGCACAAGCATTCATCTTGGTCAAAATGAAAGGCAAACCACAATGAGATTCCCAGTCTGCATGTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 72 bp GCCTTCCACGAAATTGGGCTGCCTTTGCGAAAAGACTaGTGTCTAGTCACCACCCGTGATGGAGGGATTGAT +
Preference number: 6 (lower is better)
Translates to: AFHEIGLPLRKD*CLVTTRDGGID
Trigger: ATCAATCCCTCCATCACGGGTGGTGACTAGACATCAGTCTTTTCGCAAAGGCAGCCCAATTTCGTGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 72 bp GTACTGTCTGTCTTCAATCGCTACCACGTACAAAGCTaGCCGGTCTGGAAACATAAGCCCTCCAGGTTTCAG +
Preference number: 6 (lower is better)
Translates to: VLSVFNRYHVQS*PVWKHKPSRFQ
Trigger: CTGAAACCTGGAGGGCTTATGTTTCCAGACCGGGCAGCTTTGTACGTGGTAGCGATTGAAGACAGACAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS CAA 90 bp TGCAAATGGGCCGGCTCACATGCAGACTGGGAATCTCATTGTGGTTaGCCTTTCATTTTGACCAAGATGAATGCTTGTGCTCCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: CKWAGSHADWESHCG*PFILTKMNACAPAL
Trigger: CAGGGCTGGAGCACAAGCATTCATCTTGGTCAAAATGAAAGGCAAACCACAATGAGATTCCCAGTCTGCATGTGAGCCGGCCCATTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CAA 90 bp AGGCCTCTGCAAATGGGCCGGCTCACATGCAGACTGGGAATCTCATaGTGGTTTGCCTTTCATTTTGACCAAGATGAATGCTTGTGCTCC +
Preference number: 6 (lower is better)
Translates to: RPLQMGRLTCRLGIS*WFAFHFDQDECLCS
Trigger: GGAGCACAAGCATTCATCTTGGTCAAAATGAAAGGCAAACCACAATGAGATTCCCAGTCTGCATGTGAGCCGGCCCATTTGCAGAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 72 bp TTTCCAGGCCCCTCTCCCATTTCTCTAGCTTTTCTCTaGACCTTTCTCTGTCTCTGTCTCCTCTCCATTGCT +
Preference number: 6 (lower is better)
Translates to: FPGPSPISLAFL*TFLCLCLLSIA
Trigger: AGCAATGGAGAGGAGACAGAGACAGAGAAAGGTGCAGAGAAAAGCTAGAGAAATGGGAGAGGGGCCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CAA 72 bp CCTCCTTTATCAAACAGGCATTGGTCACCACTTGCTTaGGATCCACGATGTCCACTAGAGGCTCCTTCATGG +
Preference number: 6 (lower is better)
Translates to: PPLSNRHWSPLA*DPRCPLEAPSW
Trigger: CCATGAAGGAGCCTCTAGTGGACATCGTGGATCCAAAGCAAGTGGTGACCAATGCCTGTTTGATAAAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS CAA 72 bp GCAGACTGGGAATCTCATTGTGGTTTGCCTTTCATTTaGACCAAGATGAATGCTTGTGCTCCAGCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: ADWESHCGLPFI*TKMNACAPALG
Trigger: GCCCAGGGCTGGAGCACAAGCATTCATCTTGGTCAAAATGAAAGGCAAACCACAATGAGATTCCCAGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 72 bp TATGGGTTAATTTGGGTCTTATCTCCTCAGCTGGACTaGCCCACCTTCAATCATTCAGAGCACAGATCACCC +
Preference number: 6 (lower is better)
Translates to: YGLIWVLSPQLD*PTFNHSEHRSP
Trigger: GGGTGATCTGTGCTCTGAATGATTGAAGGTGGGGCAGTCCAGCTGAGGAGATAAGACCCAAATTAACCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261252.4
CDS GCA 72 bp CGCTGTATCTTTATCAAACAGGCATTGGTCACCACTTaGTTTGGATCCACGATGTCCACTAGAGGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: RCIFIKQALVTT*FGSTMSTRGSF
Trigger: GAAGGAGCCTCTAGTGGACATCGTGGATCCAAAGCAAGTGGTGACCAATGCCTGTTTGATAAAGATACAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261252.4
CDS TCA 72 bp AGTCGTTGCGCTGTATCTGCAGGCAGAATGCAGATGTaGACGATAGCTCTTCCGTCTTCACTGTGTAAATGT +
Preference number: 6 (lower is better)
Translates to: SRCAVSAGRMQM*TIALPSSLCKC
Trigger: ACATTTACACAGTGAAGACGGAAGAGCTATCGTTCACATCTGCATTCTGCCTGCAGATACAGCGCAACGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS CCA 72 bp CGTAGTCGTTGCGCTGTATCTTTATCAAACAGGCATTaGTCACCACTTGCTTTGGATCCACGATGTCCACTA +
Preference number: 6 (lower is better)
Translates to: RSRCAVSLSNRH*SPLALDPRCPL
Trigger: TAGTGGACATCGTGGATCCAAAGCAAGTGGTGACCAATGCCTGTTTGATAAAGATACAGCGCAACGACTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261252.4
CDS CCA 72 bp TACTGTGAAATCGAGGTCTCGCACATTTTTGGCATTTaGCTTCATGGATATGGTCCCGTAGATTTCCTCCCC +
Preference number: 6 (lower is better)
Translates to: YCEIEVSHIFGI*LHGYGPVDFLP
Trigger: GGGGAGGAAATCTACGGGACCATATCCATGAAGCCAAATGCCAAAAATGTGCGAGACCTCGATTTCACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261252.4
ENST00000382622.4
ENST00000452611.6
ENST00000543701.5
CDS CAA 72 bp GTATCTTTATCAAACAGGCATTGGTCACCACTTGCTTaGGATCCACGATGTCCACTAGAGGCTCCTTCATGG +
Preference number: 6 (lower is better)
Translates to: VSLSNRHWSPLA*DPRCPLEAPSW
Trigger: CCATGAAGGAGCCTCTAGTGGACATCGTGGATCCAAAGCAAGTGGTGACCAATGCCTGTTTGATAAAGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261252.4
CDS CAA 72 bp GCCGGCTCACATGCAGACTGGGAATCTCATTGTGGTTaGCCTTTCATTTTGACCAAGATGAATGCTTGTGCT +
Preference number: 6 (lower is better)
Translates to: AGSHADWESHCG*PFILTKMNACA
Trigger: AGCACAAGCATTCATCTTGGTCAAAATGAAAGGCAAACCACAATGAGATTCCCAGTCTGCATGTGAGCCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CAA 72 bp CAAATGGGCCGGCTCACATGCAGACTGGGAATCTCATaGTGGTTTGCCTTTCATTTTGACCAAGATGAATGC +
Preference number: 6 (lower is better)
Translates to: QMGRLTCRLGIS*WFAFHFDQDEC
Trigger: GCATTCATCTTGGTCAAAATGAAAGGCAAACCACAATGAGATTCCCAGTCTGCATGTGAGCCGGCCCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CAA 72 bp GGAAACGCTGCCACAGCCAAAGCAACAGAATTTAAGTaGACCGACTTGCCCTCTAAAGAAAACAAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: GNAATAKATEFK*TDLPSKENKKE
Trigger: CTCCTTCTTGTTTTCTTTAGAGGGCAAGTCGGTCAACTTAAATTCTGTTGCTTTGGCTGTGGCAGCGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS TCA 72 bp GAAACGCTGCCACAGCCAAAGCAACAGAATTTAAGTTaGCCGACTTGCCCTCTAAAGAAAACAAGAAGGAGA +
Preference number: 6 (lower is better)
Translates to: ETLPQPKQQNLS*PTCPLKKTRRR
Trigger: TCTCCTTCTTGTTTTCTTTAGAGGGCAAGTCGGTCAACTTAAATTCTGTTGCTTTGGCTGTGGCAGCGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS GCA 72 bp TGGTTTGCCTTTCATTTTGACCAAGATGAATGCTTGTaGTCCAGCCCTGGGCCCACTGCATTTTTCAAATAT +
Preference number: 6 (lower is better)
Translates to: WFAFHFDQDECL*SSPGPTAFFKY
Trigger: ATATTTGAAAAATGCAGTGGGCCCAGGGCTGGAGCACAAGCATTCATCTTGGTCAAAATGAAAGGCAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CAA 72 bp GCCACAGCCAAAGCAACAGAATTTAAGTTGACCGACTaGCCCTCTAAAGAAAACAAGAAGGAGATGTTCCCA +
Preference number: 6 (lower is better)
Translates to: ATAKATEFKLTD*PSKENKKEMFP
Trigger: TGGGAACATCTCCTTCTTGTTTTCTTTAGAGGGCAAGTCGGTCAACTTAAATTCTGTTGCTTTGGCTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543701.5
CDS CAA 72 bp CATTTATTTCCCAGTAGCCAGTGGATTTTGAAGTCCTaGTACTGTCTGTCTTCAATCGCTACCACGTACAAA +
Preference number: 6 (lower is better)
Translates to: HLFPSSQWILKS*YCLSSIATTYK
Trigger: TTTGTACGTGGTAGCGATTGAAGACAGACAGTACAAGGACTTCAAAATCCACTGGCTACTGGGAAATAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261252.4