RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRMT7 (Homo sapiens)

Ensembl gene IDs: ENSG00000132600

Ensembl transcript IDs: ENST00000339507.9, ENST00000441236.3, ENST00000449359.7, ENST00000561806.5, ENST00000562050.5, ENST00000562381.7, ENST00000562456.1, ENST00000563443.1, ENST00000563520.5, ENST00000563562.5, ENST00000563608.2, ENST00000564050.6, ENST00000564441.5, ENST00000565356.5, ENST00000565745.5, ENST00000565761.1, ENST00000565983.5, ENST00000566341.5, ENST00000566430.2, ENST00000566687.1, ENST00000566708.1, ENST00000567542.5, ENST00000568463.1, ENST00000568975.5, ENST00000569047.7, ENST00000569571.5, ENST00000675132.1

Found 922 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGGCTCCAGGAGGCCAGTGCTGAGCGTGCACTCCGGGGTCAGGTaGTACTCCATCCATAGCACCGCTGCGTGGCTCTGCCCGGGCCTG +
Preference number: 1 (lower is better)
Translates to: AGSRRPVLSVHSGVR*YSIHSTAAWLCPGL
Trigger: CAGGCCCGGGCAGAGCCACGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGGAGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
3UTR GCA 90 bp AGGGGCTGCAGGGGCACCGGCTGCTGGAAGTCAAAGGTCAGGATCTaGCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGGG +
Preference number: 1 (lower is better)
Translates to: RGCRGTGCWKSKVRI*QGSERLRHGYSHSG
Trigger: CCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTTGACTTCCAGCAGCCGGTGCCCCTGCAGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
3UTR GCA 90 bp TGCCCGGGCCTTCTGAGCTCCACGGTGCCCTCGGCACACAGGGGCTaGAGGGGCACCGGCTGCTGGAAGTCAAAGGTCAGGATCTGCCAG +
Preference number: 1 (lower is better)
Translates to: CPGLLSSTVPSAHRG*RGTGCWKSKVRICQ
Trigger: CTGGCAGATCCTGACCTTTGACTTCCAGCAGCCGGTGCCCCTGCAGCCCCTGTGTGCCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
3UTR CCA 90 bp GCAGGCTCCAGGAGGCCAGTGCTGAGCGTGCACTCCGGGGTCAGGTaGTACTCCATCCATAGCACCGCTGCGTGGCTCTGCCCGGGCCTT +
Preference number: 1 (lower is better)
Translates to: AGSRRPVLSVHSGVR*YSIHSTAAWLCPGL
Trigger: AAGGCCCGGGCAGAGCCACGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGGAGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
3UTR CCA 90 bp TGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGGGTaGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAGGGCACGCTTA +
Preference number: 1 (lower is better)
Translates to: CQGSERLRHGYSHSG*GSASLLSLKSRARL
Trigger: TAAGCGTGCCCTGGACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
3UTR CCA 90 bp TCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCGGCTGGCCTaGCACAAGCCTCACCTTCTAAGCTGCGAGCCAGAGGCCACTGGG +
Preference number: 1 (lower is better)
Translates to: SEDTGTLLIQAARLA*HKPHLLSCEPEATG
Trigger: CCCAGTGGCCTCTGGCTCGCAGCTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR TCA 90 bp CAGAGGGTGCGCCAGGGCAGCTCTCCACGTCAACGGGAGGGACGATaGCCTGCTCTCCGAGGCTGGTCTGCACGTGGATGGGAAATAGCT +
Preference number: 1 (lower is better)
Translates to: QRVRQGSSPRQREGR*PALRGWSARGWEIA
Trigger: AGCTATTTCCCATCCACGTGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTTGACGTGGAGAGCTGCCCTGGCGCACCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR GCA 90 bp CAGGCACTGCCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTaGTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTC +
Preference number: 1 (lower is better)
Translates to: QALPKSALNPRTPEL*SYRRLGWPGTSLTF
Trigger: GAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR TCA 90 bp AGTTCCTGCCCCCAACTGCAGGACAGGCACTGCCCAAGTCTGCCCTaGATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCGGCT +
Preference number: 1 (lower is better)
Translates to: SSCPQLQDRHCPSLP*IRGHRNSAHTGGSA
Trigger: AGCCGAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTGTCCTGCAGTTGGGGGCAGGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR GCA 90 bp AGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTaGCTTGTGTCCAGTCTCAGGTCCTGGCAGGCCACCAGCTGGTGC +
Preference number: 1 (lower is better)
Translates to: SHFPGPASQELLWDS*LVSSLRSWQATSWC
Trigger: GCACCAGCTGGTGGCCTGCCAGGACCTGAGACTGGACACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR GCA 90 bp GGTGCGCCAGGGCAGCTCTCCACGTCAACGGGAGGGACGATGACCTaGTCTCCGAGGCTGGTCTGCACGTGGATGGGAAATAGCTTGTTC +
Preference number: 1 (lower is better)
Translates to: GAPGQLSTSTGGTMT*SPRLVCTWMGNSLF
Trigger: GAACAAGCTATTTCCCATCCACGTGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTTGACGTGGAGAGCTGCCCTGGCGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR CCA 90 bp TCCCCTGACAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTaGGACAGCTGCCTTGTGTCCAGTCTCAGGTCCTGGCAGGCCACC +
Preference number: 1 (lower is better)
Translates to: SPDSHFPGPASQELL*DSCLVSSLRSWQAT
Trigger: GGTGGCCTGCCAGGACCTGAGACTGGACACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTGTCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR CCA 90 bp TGCATAGCTGACAGTCCGTGGGCCACCCAGCAGTGCTCTGGGATCTaGGGCAGGGCTGAAGAAGTAGACGGCCTGCTTGCAGTGGGGGTT +
Preference number: 1 (lower is better)
Translates to: CIADSPWATQQCSGI*GRAEEVDGLLAVGV
Trigger: AACCCCCACTGCAAGCAGGCCGTCTACTTCTTCAGCCCTGCCCCAGATCCCAGAGCACTGCTGGGTGGCCCACGGACTGTCAGCTATGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
3UTR GCA 90 bp GCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATaGAACACGGCGCAGTCTTTCCCATCCCTGAGGCCGAGCAGCTCC +
Preference number: 1 (lower is better)
Translates to: ATAGARGQQCKDATR*NTAQSFPSLRPSSS
Trigger: GGAGCTGCTCGGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR CCA 90 bp TCCACGACCACATCCTCCCGGACTCCACCAGCTGTGCATAGACGGTaGCTCTGTGGGGCACGGCCTCACAATTTTCCTCCACGAGATGCC +
Preference number: 1 (lower is better)
Translates to: STTTSSRTPPAVHRR*LCGARPHNFPPRDA
Trigger: GGCATCTCGTGGAGGAAAATTGTGAGGCCGTGCCCCACAGAGCCACCGTCTATGCACAGCTGGTGGAGTCCGGGAGGATGTGGTCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR TCA 90 bp AGGGCAGCGCCCCCTCCCCGATCAGCTCTGTGTCAAACAACTCTGTaGCCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTA +
Preference number: 1 (lower is better)
Translates to: RAAPPPRSALCQTTL*PGCWHGMACHPLDL
Trigger: TAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGACACAGAGCTGATCGGGGAGGGGGCGCTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000562381.7
3UTR GCA 90 bp GGTCTTCCCAGCCCCTCCAGGGCTCCAAATTCAGTCACCCTCTCATaGTTCCTGCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATG +
Preference number: 1 (lower is better)
Translates to: GLPSPSRAPNSVTLS*FLPQLEPEASSAKM
Trigger: CATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGCAGGAAGCATGAGAGGGTGACTGAATTTGGAGCCCTGGAGGGGCTGGGAAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR GCA 90 bp TCCACGTCAACGGGAGGGACGATGACCTGCTCTCCGAGGCTGGTCTaGACGTGGATGGGAAATAGCTTGTTCCACGACCACATCCTCCCG +
Preference number: 1 (lower is better)
Translates to: STSTGGTMTCSPRLV*TWMGNSLFHDHILP
Trigger: CGGGAGGATGTGGTCGTGGAACAAGCTATTTCCCATCCACGTGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTTGACGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR GCA 90 bp GTGAAACTCCACTGCATAGCTGACAGTCCGTGGGCCACCCAGCAGTaGTCTGGGATCTGGGGCAGGGCTGAAGAAGTAGACGGCCTGCTT +
Preference number: 1 (lower is better)
Translates to: VKLHCIADSPWATQQ*SGIWGRAEEVDGLL
Trigger: AAGCAGGCCGTCTACTTCTTCAGCCCTGCCCCAGATCCCAGAGCACTGCTGGGTGGCCCACGGACTGTCAGCTATGCAGTGGAGTTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
3UTR CCA 90 bp TCAACGGGAGGGACGATGACCTGCTCTCCGAGGCTGGTCTGCACGTaGATGGGAAATAGCTTGTTCCACGACCACATCCTCCCGGACTCC +
Preference number: 1 (lower is better)
Translates to: STGGTMTCSPRLVCT*MGNSLFHDHILPDS
Trigger: GGAGTCCGGGAGGATGTGGTCGTGGAACAAGCTATTTCCCATCCACGTGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR TCA 90 bp CCAGAGAGGAGAGGAGGGCCTTCAGCCTTCCCCGCTAGAAAGCCATaGGCCACTCAGAACCCCAGCCCTCAGGCCACTTTATTGCTCAAG +
Preference number: 1 (lower is better)
Translates to: PERRGGPSAFPARKP*ATQNPSPQATLLLK
Trigger: CTTGAGCAATAAAGTGGCCTGAGGGCTGGGGTTCTGAGTGGCTCATGGCTTTCTAGCGGGGAAGGCTGAAGGCCCTCCTCTCCTCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR TCA 90 bp GCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCCTaGGGCCGAGCAGCTCCCAGAGAGGAGAGGAGGGCCTTCAGCCTT +
Preference number: 1 (lower is better)
Translates to: AKMQQDATRRSLSHP*GRAAPREERRAFSL
Trigger: AAGGCTGAAGGCCCTCCTCTCCTCTCTGGGAGCTGCTCGGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR GCA 90 bp CATGCTTCCTGCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATaGAACAAGATGCAACACGGCGCAGTCTTTCCCATCCCTGAGGCC +
Preference number: 1 (lower is better)
Translates to: HASCHSWSQRPAVQR*NKMQHGAVFPIPEA
Trigger: GGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGCAGGAAGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR GCA 90 bp AGCTGCCTTGTGTCCAGTCTCAGGTCCTGGCAGGCCACCAGCTGGTaGAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACC +
Preference number: 1 (lower is better)
Translates to: SCLVSSLRSWQATSW*STEARHLWMWLEVT
Trigger: GGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCTGGTGGCCTGCCAGGACCTGAGACTGGACACAAGGCAGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR CCA 90 bp CAGGCCACCAGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTaGCTTGAAGTTACCTGTCAGGTGAAAGGGCCAGAACCCAGGCCT +
Preference number: 1 (lower is better)
Translates to: QATSWCSTEARHLWM*LEVTCQVKGPEPRP
Trigger: AGGCCTGGGTTCTGGCCCTTTCACCTGACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCTGGTGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR CCA 90 bp GACAGCTGCCTTGTGTCCAGTCTCAGGTCCTGGCAGGCCACCAGCTaGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTT +
Preference number: 1 (lower is better)
Translates to: DSCLVSSLRSWQATS*CSTEARHLWMWLEV
Trigger: AACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCTGGTGGCCTGCCAGGACCTGAGACTGGACACAAGGCAGCTGTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR TCA 90 bp ACATCGCTGAGGACTGTAAAGTCGGCTGGTGACACCTGGTTCAGCTaGATGTCACAGACAGAGGGTGCGCCAGGGCAGCTCTCCACGTCA +
Preference number: 1 (lower is better)
Translates to: TSLRTVKSAGDTWFS*MSQTEGAPGQLSTS
Trigger: TGACGTGGAGAGCTGCCCTGGCGCACCCTCTGTCTGTGACATTCAGCTGAACCAGGTGTCACCAGCCGACTTTACAGTCCTCAGCGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR TCA 90 bp GCTGAACATGGGCAGCACATCGCTGAGGACTGTAAAGTCGGCTGGTaGCACCTGGTTCAGCTGAATGTCACAGACAGAGGGTGCGCCAGG +
Preference number: 1 (lower is better)
Translates to: AEHGQHIAEDCKVGW*HLVQLNVTDRGCAR
Trigger: CCTGGCGCACCCTCTGTCTGTGACATTCAGCTGAACCAGGTGTCACCAGCCGACTTTACAGTCCTCAGCGATGTGCTGCCCATGTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR TCA 90 bp CTCGATGGCATAGCAGAAGTCGGCACCTGCTGTGACCGCCATCATTaGCAAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCAAGGCCTT +
Preference number: 1 (lower is better)
Translates to: LDGIAEVGTCCDRHH*QESRASANVENQGL
Trigger: AAGGCCTTGGTTCTCGACATTGGCACTGGCACGGGACTCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACTTCTGCTATGCCATCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
3UTR TCA 90 bp TTCCCCTCAGGGTCCATTTCAATGTCCCACCACGAGAGAACCACCTaGGCTCGGCCAGATGTCAGAGGTTCAAACCGCCTGCTATGGCAG +
Preference number: 1 (lower is better)
Translates to: FPSGSISMSHHERTT*ARPDVRGSNRLLWQ
Trigger: CTGCCATAGCAGGCGGTTTGAACCTCTGACATCTGGCCGAGCTCAGGTGGTTCTCTCGTGGTGGGACATTGAAATGGACCCTGAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR TCA 90 bp TCTCCTCTGGGTCTGAGTGTGCCCAGAAGGGGGCCATGGTGCACTTaGTCTTCCCCTCAGGGTCCATTTCAATGTCCCACCACGAGAGAA +
Preference number: 1 (lower is better)
Translates to: SPLGLSVPRRGPWCT*SSPQGPFQCPTTRE
Trigger: TTCTCTCGTGGTGGGACATTGAAATGGACCCTGAGGGGAAGATCAAGTGCACCATGGCCCCCTTCTGGGCACACTCAGACCCAGAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR TCA 90 bp TCGGCCAGATGTCAGAGGTTCAAACCGCCTGCTATGGCAGGCTGCTaGGCTACTGACTTGCTTGCTGAAGTCTATGCTGAACATGGGCAG +
Preference number: 1 (lower is better)
Translates to: SARCQRFKPPAMAGC*ATDLLAEVYAEHGQ
Trigger: CTGCCCATGTTCAGCATAGACTTCAGCAAGCAAGTCAGTAGCTCAGCAGCCTGCCATAGCAGGCGGTTTGAACCTCTGACATCTGGCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR CCA 90 bp GAACCCCAGCCCTCAGGCCACTTTATTGCTCAAGAGTGGTCAGTCTaGGGTATCTGCATGCCTGAACTCCATGATGATGTCGCCTGTGTC +
Preference number: 1 (lower is better)
Translates to: EPQPSGHFIAQEWSV*GICMPELHDDVACV
Trigger: GACACAGGCGACATCATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAAAGTGGCCTGAGGGCTGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
3UTR GCA 90 bp CCCTCAGGCCACTTTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTaGATGCCTGAACTCCATGATGATGTCGCCTGTGTCGGGGTGAAA +
Preference number: 1 (lower is better)
Translates to: PSGHFIAQEWSVWGI*MPELHDDVACVGVK
Trigger: TTTCACCCCGACACAGGCGACATCATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAAAGTGGCCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
3UTR CCA 90 bp AGCCACTCAGAACCCCAGCCCTCAGGCCACTTTATTGCTCAAGAGTaGTCAGTCTGGGGTATCTGCATGCCTGAACTCCATGATGATGTC +
Preference number: 1 (lower is better)
Translates to: SHSEPQPSGHFIAQE*SVWGICMPELHDDV
Trigger: GACATCATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAAAGTGGCCTGAGGGCTGGGGTTCTGAGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675132.1
3UTR-3UTR GCA 90 bp GGCCTCTCAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACATCCCGCCACGGGGACTaGTCGCCAAGGGCGGCGTGG +
Preference number: 2 (lower is better)
Translates to: GLSARAQPGSSSPRDPATSRHGD*SPRAAW
Trigger: CCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGA...TGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTGAGAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp TGCGTGGCTCTGCCCGGGCCTTCTGAGCTCCACGGTGCCCTCGGCACACAGGGGGGAGAGGCTGCGGCATaGGTACTCCCACAGCGGGTG +
Preference number: 2 (lower is better)
Translates to: CVALPGPSELHGALGTQGGEAAA*VLPQRV
Trigger: CACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCC...CCCCTGTGTGCCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAGAGCCACGCA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000568975.5
3UTR-3UTR GCA 90 bp AGGCTCCAGGAGGCCAGTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATACCGCTGCGTGGCTCTaGCCGGGCCTTCTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: RLQEASAERALRGQVVLHTAAWL*PGLLSS
Trigger: GGAGCTCAGAAGGCCCGGGCAGAGCCACGCAGCGGT...ATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
3UTR-3UTR CCA 90 bp GTGTGTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGTCGCCAAGGGCGGCGTaGACAACCCCACCGGCCAGC +
Preference number: 2 (lower is better)
Translates to: VCERSKATAPTDLPGEAASPRAA*TTPPAS
Trigger: GCTGGCCGGTGGGGTTGTCCACGCCGCCCTTGGCGA...CGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCACACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCGCCAAGGGCGGCGTaGACAACCCCACCGGCCAGC +
Preference number: 2 (lower is better)
Translates to: SQKSRDPEILESETDRTGSPRAA*TTPPAS
Trigger: GCTGGCCGGTGGGGTTGTCCACGCCGCCCTTGGCGA...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp CATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACAGGTCGCCAAGGGCGGCGTaGACAACCCCACCGGCCAGC +
Preference number: 2 (lower is better)
Translates to: HTPPAGGAFQSEGGAGNRSPRAA*TTPPAS
Trigger: GCTGGCCGGTGGGGTTGTCCACGCCGCCCTTGGCGA...CCTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp CACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCTCCCGCCACGGGGACTaGTCGCCAAGGGCGGCGTGG +
Preference number: 2 (lower is better)
Translates to: HSWSQRPAVQRCNKMQHGSRHGD*SPRAAW
Trigger: CCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGA...GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCTGGCAGGCCACCAGCTaGTGCAGCACTGAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: ERSKATAPTDLPGEAALGWQATS*CSTEAR
Trigger: TCTGGCCTCAGTGCTGCACCAGCTGGTGGCCTGCCA...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR TCA 90 bp CCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCGGAGATCCTCGAGAGTaGGACAGACAGGACAGGCTC +
Preference number: 2 (lower is better)
Translates to: PGPSQGLQAPETQPQLSIGDPRE*DRQDRL
Trigger: GAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCC...GATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR TCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCGATCTGGGGCAGGGCTaGAGAAGTAGACGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: ERSKATAPTDLPGEAALGDLGQG*RSRRPA
Trigger: AGCAGGCCGTCTACTTCTTCAGCCCTGCCCCAGATC...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
3UTR-3UTR GCA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGCAGGCCACCAGCTGGTaGAGCACTGAGGCCAGACAC +
Preference number: 2 (lower is better)
Translates to: VREARPRHLLTFLVKRRWQATSW*STEARH
Trigger: GTGTCTGGCCTCAGTGCTGCACCAGCTGGTGGCCTG...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp GGTGCGCCAGGGCAGCTCTCCACGTCAACGGGAGGGACGATGACCTGCTCTCCGAGAGTCCCGTGCCAGTaGCAATGTCGAGAACCAAGG +
Preference number: 2 (lower is better)
Translates to: GAPGQLSTSTGGTMTCSPRVPCQ*QCREPR
Trigger: CCTTGGTTCTCGACATTGGCACTGGCACGGGACTCT...CGGAGAGCAGGTCATCGTCCCTCCCGTTGACGTGGAGAGCTGCCCTGGCGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR-3UTR CCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCGCGGCTCGGCTGGCCTaGCACAAGCCTCACCTTCTA +
Preference number: 2 (lower is better)
Translates to: GVLHLFQRQAGARPQGHAAARLA*HKPHLL
Trigger: TAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGC...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR TCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCAGGGGCTTTCCAATCTaGGGGAGGTGCAGGGAACAG +
Preference number: 2 (lower is better)
Translates to: ERSKATAPTDLPGEAALGRGFPI*GRCREQ
Trigger: CTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCT...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp CAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCGCCAGAGGCCAGCAGTaGAAAGATGCAACAAGATGC +
Preference number: 2 (lower is better)
Translates to: QPGPSQGLQAPETQPQLSARGQQ*KDATRC
Trigger: GCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGC...GCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp CCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTCAGTCACCCTCTCATaGTTCCTGCCACAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: PGPSQGLQAPETQPQLSISVTLS*FLPQLE
Trigger: CTCCAGCTGTGGCAGGAAGCATGAGAGGGTGACTGA...GATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTTCCCGCCACGGGGACTaGTCGCCAAGGGCGGCGTGG +
Preference number: 2 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCSRHGD*SPRAAW
Trigger: CCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGA...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCCTGCTCTGGGACAGCTaGCTTGTGTCCAGTCTCAGG +
Preference number: 2 (lower is better)
Translates to: ERSKATAPTDLPGEAALGLLWDS*LVSSLR
Trigger: CCTGAGACTGGACACAAGGCAGCTGTCCCAGAGCAG...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCTGCAGGGAACAGGGCTaGCTCCCAGCTCCCCTGACA +
Preference number: 2 (lower is better)
Translates to: PKSALNPRTPELCSYRRLCREQG*LPAPLT
Trigger: TGTCAGGGGAGCTGGGAGGCAGCCCTGTTCCCTGCA...GAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp AGGACAGGCACTGCCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCTCCAGTCTCAGGTCCTaGCAGGCCACCAGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: RTGTAQVCPESEDTGTLLSSLRS*QATSWC
Trigger: GCACCAGCTGGTGGCCTGCCAGGACCTGAGACTGGA...GAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCCACTCCGGGGTCAGGTaGTACTCCATCCATAGCACC +
Preference number: 2 (lower is better)
Translates to: ERSKATAPTDLPGEAALGHSGVR*YSIHST
Trigger: GGTGCTATGGATGGAGTACCACCTGACCCCGGAGTG...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
3UTR CAA 90 bp ACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTaGTGTCCAGTCTCAGGTCCTGGCAGGCCACCAGCTGGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: TFLGLHLRNCSGTAA*CPVSGPGRPPAGAA
Trigger: TGCTGCACCAGCTGGTGGCCTGCCAGGACCTGAGACTGGACACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR TCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCAGGGGCTTTCCAATCTaGGGGAGGTGCAGGGAACAG +
Preference number: 2 (lower is better)
Translates to: GVLHLFQRQAGARPQGHARGFPI*GRCREQ
Trigger: CTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCT...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp GGCCTCTCAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAGAGATGTCTCTGTGTTaGAGCATTCTCAGCACCTCA +
Preference number: 2 (lower is better)
Translates to: GLSARAQPGSSSPRDPATEMSLC*SILSTS
Trigger: TGAGGTGCTGAGAATGCTCCAACACAGAGACATCTC...TGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTGAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR TCA 90 bp GTGTGTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGGGAGATCCTCGAGAGTaGGACAGACAGGACAGGCTC +
Preference number: 2 (lower is better)
Translates to: VCERSKATAPTDLPGEAAGDPRE*DRQDRL
Trigger: GAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCC...CGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCACACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR TCA 90 bp GTGTGTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGAGGGGCTTTCCAATCTaGGGGAGGTGCAGGGAACAG +
Preference number: 2 (lower is better)
Translates to: VCERSKATAPTDLPGEAARGFPI*GRCREQ
Trigger: CTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCT...CGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGACAGGCCACCAGCTGGTaGAGCACTGAGGCCAGACAC +
Preference number: 2 (lower is better)
Translates to: PETQPQLSISTLLAEARRQATSW*STEARH
Trigger: GTGTCTGGCCTCAGTGCTGCACCAGCTGGTGGCCTG...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp GCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCCCACTTTCCTGGGCCTaGATCTCAGGAACTGCTCTG +
Preference number: 2 (lower is better)
Translates to: ARVFKPQRPSHNSASPPSPLSWA*ISGTAL
Trigger: CAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGG...GGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGGTTCCTGCCCCCAACTaGAGGACAGGCACTGCCCAA +
Preference number: 2 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKVPAPN*RTGTAQ
Trigger: TTGGGCAGTGCCTGTCCTGCAGTTGGGGGCAGGAAC...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCCACTCCCTTCCCAGCTaGGGAGAGATGTCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: GVLHLFQRQAGARPQGHAHSLPS*GEMSLC
Trigger: ACACAGAGACATCTCTCCCCAGCTGGGAAGGGAGTG...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGATCCAGTCTCAGGTCCTaGCAGGCCACCAGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: PETQPQLSISTLLAEARRSSLRS*QATSWC
Trigger: GCACCAGCTGGTGGCCTGCCAGGACCTGAGACTGGA...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGATTTCAGCGACAAGCTaGGGCCAGGCCTCAGGGGCA +
Preference number: 2 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKISATS*GQASGA
Trigger: TGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAAT...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp TCCACGACCACATCCTCCCGGACTCCACCAGCTGTGCATAGACGGTGGCTCTGTGATGTTGGCACGGCATaGCATGTCACCCTCTGGACC +
Preference number: 2 (lower is better)
Translates to: STTTSSRTPPAVHRRWLCDVGTA*HVTLWT
Trigger: GGTCCAGAGGGTGACATGCCATGCCGTGCCAACATC...ACAGAGCCACCGTCTATGCACAGCTGGTGGAGTCCGGGAGGATGTGGTCGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR-3UTR TCA 90 bp GTGAGGCTCAAGGCTGGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGTGCCCAAGTCTGCCCTaGATCCGAGGACACCGGAAC +
Preference number: 2 (lower is better)
Translates to: VRLKAGVLHLFQRQAGARCPSLP*IRGHRN
Trigger: GTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCA...CCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACCAGCCTTGAGCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp CAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTTGTCTGCTCTGGGACAGCTaGCTTGTGTCCAGTCTCAGG +
Preference number: 2 (lower is better)
Translates to: QPLSWACISGTALGQLPCLLWDS*LVSSLR
Trigger: CCTGAGACTGGACACAAGGCAGCTGTCCCAGAGCAG...ACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACCCACTTTCCTGGGCCTaGATCTCAGGAACTGCTCTG +
Preference number: 2 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNPLSWA*ISGTAL
Trigger: CAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGG...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp GATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGTGGTGCAGGGGCACCGGCTaGTGGAAGTCAAAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: DDVACVGVKLHCIADSPWCRGTG*WKSKVR
Trigger: CCTGACCTTTGACTTCCAGCAGCCGGTGCCCCTGCA...CCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
3UTR-3UTR GCA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACGGGGTGAAACTCCACTaGATAGCTGACAGTCCGTGG +
Preference number: 2 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNGVKLH*IADSPW
Trigger: CCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCC...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675132.1
3UTR-3UTR CCA 90 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCCACTCCCTTCCCAGCTaGGGAGAGATGTCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: PKSALNPRTPELCSYRRLHSLPS*GEMSLC
Trigger: ACACAGAGACATCTCTCCCCAGCTGGGAAGGGAGTG...GAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCTCTCAGGAACTGCTCTaGGACAGCTGCCTTGTGTCC +
Preference number: 2 (lower is better)
Translates to: PKSALNPRTPELCSYRRLSQELL*DSCLVS
Trigger: GGACACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGA...GAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGCCAGCAGTGCAAAGATaGAACAAGATGCAACACGGC +
Preference number: 2 (lower is better)
Translates to: VREARPRHLLTFLVKRRWPAVQR*NKMQHG
Trigger: GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGG...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp GGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCCCCTCTCATGCTTCCTaGCACAGCTGGAGCCAGAGG +
Preference number: 2 (lower is better)
Translates to: GQQCKDATRCNTAQSFPSPSHAS*HSWSQR
Trigger: CCTCTGGCTCCAGCTGTGGCAGGAAGCATGAGAGGG...GGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGTCAGTCACCCTCTCATaGTTCCTGCCACAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKSVTLS*FLPQLE
Trigger: CTCCAGCTGTGGCAGGAAGCATGAGAGGGTGACTGA...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp AGGACAGGCACTGCCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCCTGGGTTCTCTCACGTaGTGTCTGCTGTTACCTCTG +
Preference number: 2 (lower is better)
Translates to: RTGTAQVCPESEDTGTLLLGSLT*CLLLPL
Trigger: CAGAGGTAACAGCAGACACCACGTGAGAGAACCCAG...GAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp GTGACACCTGGTTCAGCTGAATGTCACAGACAGAGGGTGCGCCAGGGCAGCTCTTGGCATGTCACCCTCTaGACCTACAGTCACCTCGGT +
Preference number: 2 (lower is better)
Translates to: VTPGSAECHRQRVRQGSSWHVTL*TYSHLG
Trigger: ACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCA...AGAGCTGCCCTGGCGCACCCTCTGTCTGTGACATTCAGCTGAACCAGGTGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR-3UTR CCA 90 bp GATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGTGGCACTCCGGGGTCAGGTaGTACTCCATCCATAGCACC +
Preference number: 2 (lower is better)
Translates to: DDVACVGVKLHCIADSPWHSGVR*YSIHST
Trigger: GGTGCTATGGATGGAGTACCACCTGACCCCGGAGTG...CCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
3UTR CAA 90 bp ATCTCCTCTGGGTCTGAGTGTGCCCAGAAGGGGGCCATGGTGCACTaGATCTTCCCCTCAGGGTCCATTTCAATGTCCCACCACGAGAGA +
Preference number: 2 (lower is better)
Translates to: ISSGSECAQKGAMVH*IFPSGSISMSHHER
Trigger: TCTCTCGTGGTGGGACATTGAAATGGACCCTGAGGGGAAGATCAAGTGCACCATGGCCCCCTTCTGGGCACACTCAGACCCAGAGGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR-3UTR TCA 90 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCGTCTGCTGTTACCTCTaGGAGCTGGGACATAACCAA +
Preference number: 2 (lower is better)
Translates to: PKSALNPRTPELCSYRRLVCCYL*ELGHNQ
Trigger: TTGGTTATGTCCCAGCTCTCAGAGGTAACAGCAGAC...GAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp CATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACAGGCCAGCAGTGCAAAGATaGAACAAGATGCAACACGGC +
Preference number: 2 (lower is better)
Translates to: HTPPAGGAFQSEGGAGNRPAVQR*NKMQHG
Trigger: GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGG...CCTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTCCCTCTCATGCTTCCTaGCACAGCTGGAGCCAGAGG +
Preference number: 2 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCPSHAS*HSWSQR
Trigger: CCTCTGGCTCCAGCTGTGGCAGGAAGCATGAGAGGG...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp CATGGCATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATACTCTGTCCTTCACCCTaGTCACGGCAGCCCGGATAC +
Preference number: 2 (lower is better)
Translates to: HGMSPSGPTVTSVECLLILCPSP*SRQPGY
Trigger: GTATCCGGGCTGCCGTGAGCAGGGTGAAGGACAGAG...TATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
3UTR-3UTR GCA 90 bp GCTGAAGTCTATGCTGAACATGGGCAGCACATCGCTGAGGACTGTAAAGTCGGCCACGAGATGCCTGTGTaGGTGCTCATAGGAGGGCAG +
Preference number: 2 (lower is better)
Translates to: AEVYAEHGQHIAEDCKVGHEMPV*VLIGGQ
Trigger: CTGCCCTCCTATGAGCACGCACACAGGCATCTCGTG...GCCGACTTTACAGTCCTCAGCGATGTGCTGCCCATGTTCAGCATAGACTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR-3UTR CCA 90 bp CATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACAGGGAGATGTCTCTGTGTTaGAGCATTCTCAGCACCTCA +
Preference number: 2 (lower is better)
Translates to: HTPPAGGAFQSEGGAGNREMSLC*SILSTS
Trigger: TGAGGTGCTGAGAATGCTCCAACACAGAGACATCTC...CCTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp GGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCCACTCCCTTCCCAGCTaGGGAGAGATGTCTCTGTGT +
Preference number: 2 (lower is better)
Translates to: GQQCKDATRCNTAQSFPSHSLPS*GEMSLC
Trigger: ACACAGAGACATCTCTCCCCAGCTGGGAAGGGAGTG...GGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGGAGGCCAGACACCTATaGATGTGGCTTGAAGTTACC +
Preference number: 2 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKEARHL*MWLEVT
Trigger: GGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTC...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp GTGACACCTGGTTCAGCTGAATGTCACAGACAGAGGGTGCGCCAGGGCAGCTCTTGGTCTGCACGTGGATaGGAAATAGCTTGTTCCACG +
Preference number: 2 (lower is better)
Translates to: VTPGSAECHRQRVRQGSSWSARG*EIACST
Trigger: CGTGGAACAAGCTATTTCCCATCCACGTGCAGACCA...AGAGCTGCCCTGGCGCACCCTCTGTCTGTGACATTCAGCTGAACCAGGTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR-3UTR CCA 90 bp CAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTTGTCAAGAGTGGTCAGTCTaGGGTATCTGCATGCCTGAA +
Preference number: 2 (lower is better)
Translates to: QPLSWACISGTALGQLPCQEWSV*GICMPE
Trigger: TTCAGGCATGCAGATACCCCAGACTGACCACTCTTG...ACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675132.1
3UTR-3UTR CCA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAGAGGCCAGACACCTATaGATGTGGCTTGAAGTTACC +
Preference number: 2 (lower is better)
Translates to: PETQPQLSISTLLAEARREARHL*MWLEVT
Trigger: GGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTC...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR CCA 90 bp ATGCCTGAACTCCATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAAGGGGCACCGGCTGCTaGAAGTCAAAGGTCAGGATC +
Preference number: 2 (lower is better)
Translates to: MPELHDDVACVGVKLHCIRGTGC*KSKVRI
Trigger: GATCCTGACCTTTGACTTCCAGCAGCCGGTGCCCCT...TATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATGGAGTTCAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
3UTR-3UTR TCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGTTTCCTTACTGGTGCTaGAAGGAAGGATGGATAACG +
Preference number: 2 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKFPYWC*KEGWIT
Trigger: CGTTATCCATCCTTCCTTTCAGCACCAGTAAGGAAA...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTCCAGCAGTGCAAAGATaGAACAAGATGCAACACGGC +
Preference number: 2 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCPAVQR*NKMQHG
Trigger: GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGG...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp GCATGGCATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATTTGACAAGAGTCCCGTaGCAGTGCCAATGTCGAGAA +
Preference number: 2 (lower is better)
Translates to: AWHVTLWTYSHLGGMLVDLTRVP*QCQCRE
Trigger: TTCTCGACATTGGCACTGGCACGGGACTCTTGTCAA...ATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
3UTR-3UTR CCA 90 bp TTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCCTGAACTCCATGATGATAGCTGACAGTCCGTaGGCCACCCAGCAGTGCTCT +
Preference number: 2 (lower is better)
Translates to: LLLKSGQSGVSACLNSMMIADSP*ATQQCS
Trigger: AGAGCACTGCTGGGTGGCCCACGGACTGTCAGCTAT...CATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
3UTR-3UTR TCA 90 bp TCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACCTTAATCAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGA +
Preference number: 2 (lower is better)
Translates to: SPSGPTVTSVECLLITLISRHLL*PPSLTR
Trigger: TCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACT...GATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
3UTR-3UTR GCA 90 bp TCAGGCCACTTTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCCTGAAATGTCGTCCATGATGTaGACGTCGAAGCCTTCGCAG +
Preference number: 2 (lower is better)
Translates to: SGHFIAQEWSVWGICMPEMSSMM*TSKPSQ
Trigger: CTGCGAAGGCTTCGACGTGCACATCATGGACGACAT...TTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAAAGTGGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
3UTR-3UTR GCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAAAAGATGCAACAAGATaGAACACGGCGCAGTCTTTC +
Preference number: 2 (lower is better)
Translates to: WGEMSLCWSILSTSEAQAKDATR*NTAQSF
Trigger: GAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTT...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR-3UTR GCA 90 bp CTTGATCTTCCCCTCAGGGTCCATTTCAATGTCCCACCACGAGAGAACCACCTGGTCACCTCGGTGGAATaGTTGTTGATAACCTTAATC +
Preference number: 2 (lower is better)
Translates to: LDLPLRVHFNVPPRENHLVTSVE*LLITLI
Trigger: GATTAAGGTTATCAACAAGCATTCCACCGAGGTGAC...CAGGTGGTTCTCTCGTGGTGGGACATTGAAATGGACCCTGAGGGGAAGATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR GCA 72 bp AGTGAGACAGACAGGACAGGCTCCCGCCACGGGGACTaGTCGCCAAGGGCGGCGTGGACAACCCCACCGGCC +
Preference number: 3 (lower is better)
Translates to: SETDRTGSRHGD*SPRAAWTTPPA
Trigger: GGCCGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGTCCTGTCTGTCTCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR CCA 72 bp GGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATaGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCT +
Preference number: 3 (lower is better)
Translates to: GQDLPGLGEAAA*VLPQRVGLSFP
Trigger: AGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
3UTR TCA 72 bp CGCCAGGGCAGCTCTCCACGTCAACGGGAGGGACGATaGCCTGCTCTCCGAGGCTGGTCTGCACGTGGATGG +
Preference number: 3 (lower is better)
Translates to: RQGSSPRQREGR*PALRGWSARGW
Trigger: CCATCCACGTGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTTGACGTGGAGAGCTGCCCTGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR GCA 72 bp CTTCTGAGCTCCACGGTGCCCTCGGCACACAGGGGCTaGAGGGGCACCGGCTGCTGGAAGTCAAAGGTCAGG +
Preference number: 3 (lower is better)
Translates to: LLSSTVPSAHRG*RGTGCWKSKVR
Trigger: CCTGACCTTTGACTTCCAGCAGCCGGTGCCCCTGCAGCCCCTGTGTGCCGAGGGCACCGTGGAGCTCAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
3UTR CCA 72 bp TCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGGGTaGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAGG +
Preference number: 3 (lower is better)
Translates to: SERLRHGYSHSG*GSASLLSLKSR
Trigger: CCTGGACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
3UTR GCA 72 bp AGTCAAAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTaGGGCATGGGTACTCCCACAGCGGGTGGGGCTCAG +
Preference number: 3 (lower is better)
Translates to: SQRSGSARARRG*GMGTPTAGGAQ
Trigger: CTGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTTGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
3UTR GCA 72 bp AGGGGCACCGGCTGCTGGAAGTCAAAGGTCAGGATCTaGCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCC +
Preference number: 3 (lower is better)
Translates to: RGTGCWKSKVRI*QGSERLRHGYS
Trigger: GGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTTGACTTCCAGCAGCCGGTGCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
3UTR CCA 72 bp AGGAGGCCAGTGCTGAGCGTGCACTCCGGGGTCAGGTaGTACTCCATCCATAGCACCGCTGCGTGGCTCTGC +
Preference number: 3 (lower is better)
Translates to: RRPVLSVHSGVR*YSIHSTAAWLC
Trigger: GCAGAGCCACGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCACTGGCCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
3UTR GCA 72 bp CCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTaGCTTGTGTCCAGTCTCAGGTCCTGGCAGGCCACC +
Preference number: 3 (lower is better)
Translates to: PGPASQELLWDS*LVSSLRSWQAT
Trigger: GGTGGCCTGCCAGGACCTGAGACTGGACACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR GCA 72 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTaGTCATACAGGCGGCTCGGCTGGCCTGGCACAAGC +
Preference number: 3 (lower is better)
Translates to: PKSALNPRTPEL*SYRRLGWPGTS
Trigger: GCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR GCA 72 bp GTTCCACGACCACATCCTCCCGGACTCCACCAGCTGTaGATAGACGGTGGCTCTGTGGGGCACGGCCTCACA +
Preference number: 3 (lower is better)
Translates to: VPRPHPPGLHQL*IDGGSVGHGLT
Trigger: TGTGAGGCCGTGCCCCACAGAGCCACCGTCTATGCACAGCTGGTGGAGTCCGGGAGGATGTGGTCGTGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR TCA 72 bp CAACAAGATGCAACACGGCGCAGTCTTTCCCATCCCTaGGGCCGAGCAGCTCCCAGAGAGGAGAGGAGGGCC +
Preference number: 3 (lower is better)
Translates to: QQDATRRSLSHP*GRAAPREERRA
Trigger: GGCCCTCCTCTCCTCTCTGGGAGCTGCTCGGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR CCA 72 bp ACCGGAACTCTGCTCATACAGGCGGCTCGGCTGGCCTaGCACAAGCCTCACCTTCTAAGCTGCGAGCCAGAG +
Preference number: 3 (lower is better)
Translates to: TGTLLIQAARLA*HKPHLLSCEPE
Trigger: CTCTGGCTCGCAGCTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTTCCGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR TCA 72 bp TGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTaGCAGTCCGTGGGCCACCCAGCAGTGCTCTGGGAT +
Preference number: 3 (lower is better)
Translates to: CRLCRGETPLHS*QSVGHPAVLWD
Trigger: ATCCCAGAGCACTGCTGGGTGGCCCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
3UTR GCA 72 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATaGAACACGGCGCAGTCTTTCCCATCCCTGAGGCCG +
Preference number: 3 (lower is better)
Translates to: GARGQQCKDATR*NTAQSFPSLRP
Trigger: CGGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR GCA 72 bp ACGGGAGGGACGATGACCTGCTCTCCGAGGCTGGTCTaGACGTGGATGGGAAATAGCTTGTTCCACGACCAC +
Preference number: 3 (lower is better)
Translates to: TGGTMTCSPRLV*TWMGNSLFHDH
Trigger: GTGGTCGTGGAACAAGCTATTTCCCATCCACGTGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR CCA 72 bp AGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTaGGACAGCTGCCTTGTGTCCAGTCTCAGGTCCTGG +
Preference number: 3 (lower is better)
Translates to: SHFPGPASQELL*DSCLVSSLRSW
Trigger: CCAGGACCTGAGACTGGACACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR CCA 72 bp ACATCCTCCCGGACTCCACCAGCTGTGCATAGACGGTaGCTCTGTGGGGCACGGCCTCACAATTTTCCTCCA +
Preference number: 3 (lower is better)
Translates to: TSSRTPPAVHRR*LCGARPHNFPP
Trigger: TGGAGGAAAATTGTGAGGCCGTGCCCCACAGAGCCACCGTCTATGCACAGCTGGTGGAGTCCGGGAGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR TCA 72 bp CCCCCTCCCCGATCAGCTCTGTGTCAAACAACTCTGTaGCCAGGATGTTGGCACGGCATGGCATGTCACCCT +
Preference number: 3 (lower is better)
Translates to: PPPRSALCQTTL*PGCWHGMACHP
Trigger: AGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGACACAGAGCTGATCGGGGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000562381.7
3UTR TCA 72 bp AGGACTGTAAAGTCGGCTGGTGACACCTGGTTCAGCTaGATGTCACAGACAGAGGGTGCGCCAGGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: RTVKSAGDTWFS*MSQTEGAPGQL
Trigger: GAGCTGCCCTGGCGCACCCTCTGTCTGTGACATTCAGCTGAACCAGGTGTCACCAGCCGACTTTACAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR TCA 72 bp GGTCTGAGTGTGCCCAGAAGGGGGCCATGGTGCACTTaGTCTTCCCCTCAGGGTCCATTTCAATGTCCCACC +
Preference number: 3 (lower is better)
Translates to: GLSVPRRGPWCT*SSPQGPFQCPT
Trigger: GGTGGGACATTGAAATGGACCCTGAGGGGAAGATCAAGTGCACCATGGCCCCCTTCTGGGCACACTCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR CCA 72 bp GGGACGATGACCTGCTCTCCGAGGCTGGTCTGCACGTaGATGGGAAATAGCTTGTTCCACGACCACATCCTC +
Preference number: 3 (lower is better)
Translates to: GTMTCSPRLVCT*MGNSLFHDHIL
Trigger: GAGGATGTGGTCGTGGAACAAGCTATTTCCCATCCACGTGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR-3UTR CAA 90 bp ACTCCACCAGCTGTGCATAGACGGTGGCTCTGTGGGGCACGGCCTCACAATTTTTCTGTGACCAGGATGTaGGCACGGCATGGCATGTCA +
Preference number: 3 (lower is better)
Translates to: TPPAVHRRWLCGARPHNFSVTRM*ARHGMS
Trigger: TGACATGCCATGCCGTGCCAACATCCTGGTCACAGA...AAAATTGTGAGGCCGTGCCCCACAGAGCCACCGTCTATGCACAGCTGGTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR TCA 72 bp AAACCTCGATGGCATAGCAGAAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGAGTCCCGTGCCAGTGC +
Preference number: 3 (lower is better)
Translates to: KPRWHSRSRHLL*PPSLTRVPCQC
Trigger: GCACTGGCACGGGACTCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACTTCTGCTATGCCATCGAGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
3UTR TCA 72 bp GGGCAGCACATCGCTGAGGACTGTAAAGTCGGCTGGTaGCACCTGGTTCAGCTGAATGTCACAGACAGAGGG +
Preference number: 3 (lower is better)
Translates to: GQHIAEDCKVGW*HLVQLNVTDRG
Trigger: CCCTCTGTCTGTGACATTCAGCTGAACCAGGTGTCACCAGCCGACTTTACAGTCCTCAGCGATGTGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR TCA 72 bp GGGTCCATTTCAATGTCCCACCACGAGAGAACCACCTaGGCTCGGCCAGATGTCAGAGGTTCAAACCGCCTG +
Preference number: 3 (lower is better)
Translates to: GSISMSHHERTT*ARPDVRGSNRL
Trigger: CAGGCGGTTTGAACCTCTGACATCTGGCCGAGCTCAGGTGGTTCTCTCGTGGTGGGACATTGAAATGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR GCA 72 bp TGCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATaGAACAAGATGCAACACGGCGCAGTCTTTCCCATC +
Preference number: 3 (lower is better)
Translates to: CHSWSQRPAVQR*NKMQHGAVFPI
Trigger: GATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR GCA 72 bp GAGCCACTCAGAACCCCAGCCCTCAGGCCACTTTATTaGTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCC +
Preference number: 3 (lower is better)
Translates to: EPLRTPALRPLY*SRVVSLGYLHA
Trigger: GGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAAAGTGGCCTGAGGGCTGGGGTTCTGAGTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675132.1
3UTR CCA 72 bp GCTCGGCCAGATGTCAGAGGTTCAAACCGCCTGCTATaGCAGGCTGCTGAGCTACTGACTTGCTTGCTGAAG +
Preference number: 3 (lower is better)
Translates to: ARPDVRGSNRLL*QAAELLTCLLK
Trigger: CTTCAGCAAGCAAGTCAGTAGCTCAGCAGCCTGCCATAGCAGGCGGTTTGAACCTCTGACATCTGGCCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR TCA 72 bp ATAGCAGAAGTCGGCACCTGCTGTGACCGCCATCATTaGCAAGAGTCCCGTGCCAGTGCCAATGTCGAGAAC +
Preference number: 3 (lower is better)
Translates to: IAEVGTCCDRHH*QESRASANVEN
Trigger: GTTCTCGACATTGGCACTGGCACGGGACTCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACTTCTGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
3UTR CCA 72 bp GTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATaGCATGTCACCCTCTGGACCTACAGTCACCTCGGT +
Preference number: 3 (lower is better)
Translates to: VKQLCDQDVGTA*HVTLWTYSHLG
Trigger: ACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
3UTR-3UTR CAA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAAGAGATGTCTCTGTGTaGGAGCATTCTCAGCACCTC +
Preference number: 3 (lower is better)
Translates to: PETQPQLSISTLLAEARRRDVSV*EHSQHL
Trigger: GAGGTGCTGAGAATGCTCCAACACAGAGACATCTCT...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR GCA 72 bp AACCGCCTGCTATGGCAGGCTGCTGAGCTACTGACTTaGTTGCTGAAGTCTATGCTGAACATGGGCAGCACA +
Preference number: 3 (lower is better)
Translates to: NRLLWQAAELLT*LLKSMLNMGST
Trigger: TGTGCTGCCCATGTTCAGCATAGACTTCAGCAAGCAAGTCAGTAGCTCAGCAGCCTGCCATAGCAGGCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR CCA 72 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTaGCTTGAAGTTACCTGTCAGGTGAAAGGGCCAGAA +
Preference number: 3 (lower is better)
Translates to: SWCSTEARHLWM*LEVTCQVKGPE
Trigger: TTCTGGCCCTTTCACCTGACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR CCA 72 bp GAACCCCAGCCCTCAGGCCACTTTATTGCTCAAGAGTaGTCAGTCTGGGGTATCTGCATGCCTGAACTCCAT +
Preference number: 3 (lower is better)
Translates to: EPQPSGHFIAQE*SVWGICMPELH
Trigger: ATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAAAGTGGCCTGAGGGCTGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675132.1
3UTR GCA 72 bp TTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATaGCTGAACTCCATGATGATGTCGCCTGTGTCGGGG +
Preference number: 3 (lower is better)
Translates to: LLLKSGQSGVSA*LNSMMMSPVSG
Trigger: CCCCGACACAGGCGACATCATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
3UTR TCA 72 bp TGTCAGAGGTTCAAACCGCCTGCTATGGCAGGCTGCTaGGCTACTGACTTGCTTGCTGAAGTCTATGCTGAA +
Preference number: 3 (lower is better)
Translates to: CQRFKPPAMAGC*ATDLLAEVYAE
Trigger: TTCAGCATAGACTTCAGCAAGCAAGTCAGTAGCTCAGCAGCCTGCCATAGCAGGCGGTTTGAACCTCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
3UTR GCA 72 bp CACTTTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTaGATGCCTGAACTCCATGATGATGTCGCCTGTGTC +
Preference number: 3 (lower is better)
Translates to: HFIAQEWSVWGI*MPELHDDVACV
Trigger: GACACAGGCGACATCATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
3UTR-3UTR CAA 90 bp GCTGAAGTCTATGCTGAACATGGGCAGCACATCGCTGAGGACTGTAAAGTCGGCTCGGTGGAATGCTTGTaGATAACCTTAATCTTATCA +
Preference number: 3 (lower is better)
Translates to: AEVYAEHGQHIAEDCKVGSVECL*ITLILS
Trigger: TGATAAGATTAAGGTTATCAACAAGCATTCCACCGA...GCCGACTTTACAGTCCTCAGCGATGTGCTGCCCATGTTCAGCATAGACTTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR TCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGTGCTCCACCCCCAGGTaGTGGGCCAGCACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPCSTPR*WASTES
Trigger: GCTCTCCGTGCTGGCCCATCACCTGGGGGTGGAGCA...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGCCAGGAGGCCAGTGCTaGGCGTGCACTCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPPGGQC*ACTPGS
Trigger: TGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGG...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp TGCGTGGCTCTGCCCGGGCCTTCTGAGCTCCACGGTGCCCTCGGCACACAGGGGCCAGGAGGCCAGTGCTaGGCGTGCACTCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: CVALPGPSELHGALGTQGPGGQC*ACTPGS
Trigger: TGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGG...CCCCTGTGTGCCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAGAGCCACGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp GGCCTCTCAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACATCGCCAAGGGCGGCGTaGACAACCCCACCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLSARAQPGSSSPRDPATSPRAA*TTPPAS
Trigger: GCTGGCCGGTGGGGTTGTCCACGCCGCCCTTGGCGA...TGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTGAGAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGAGGGGAGGGAGTTCCTaGCCCCAACTGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPRGGSS*PQLQDR
Trigger: CCTGTCCTGCAGTTGGGGGCAGGAACTCCCTCCCCT...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GACAGGACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCTGGGGCATCACCATaGCACCTGGCCCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: DRTGSRHGDCSPRAAWTTPGASP*HLAPGA
Trigger: AGCACCTGGGGCCAGGTGCCATGGTGATGCCCCAGG...GGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGTCCTGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp TGCGTGGCTCTGCCCGGGCCTTCTGAGCTCCACGGTGCCCTCGGCACACAGGGGCATAGCACCGCTGCGTaGCTCTGCCCGGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: CVALPGPSELHGALGTQGHSTAA*LCPGLL
Trigger: CAGAAGGCCCGGGCAGAGCCACGCAGCGGTGCTATG...CCCCTGTGTGCCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAGAGCCACGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGTGGCAGGCCACCAGCTaGTGCAGCACTGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPWQATS*CSTEAR
Trigger: TCTGGCCTCAGTGCTGCACCAGCTGGTGGCCTGCCA...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGTACCAGATAGAGCGCTaGGCCCTGCACCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPYQIER*ALHHRL
Trigger: GAGCCTGTGGTGCAGGGCTCAGCGCTCTATCTGGTA...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCAGAACCCCGCTCTCCTaGAGGCCCGGGTGTCCCGAG +
Preference number: 4 (lower is better)
Translates to: QPGPSQGLQAPETQPQLSRTPLS*RPGCPE
Trigger: CTCGGGACACCCGGGCCTGCAGGAGAGCGGGGTTCT...GCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR GCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGCTCTGTCCTTCACCCTaGTCACGGCAGCCCGGATAC +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPLCPSP*SRQPGY
Trigger: GTATCCGGGCTGCCGTGAGCAGGGTGAAGGACAGAG...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAGGGCACCTGGCCCCAGGTaGTGGTCCACAGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: GYSHSGWGSASLLSLKSRAPGPR*WSTAVR
Trigger: GCGGACCGCTGTGGACCAGCACCTGGGGCCAGGTGC...CCTGGACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp GACAGGACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCAGGGCTCGGAGAGGCTaGGGCATGGGTACTCCCACA +
Preference number: 4 (lower is better)
Translates to: DRTGSRHGDCSPRAAWTTRARRG*GMGTPT
Trigger: TGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCT...GGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGTCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CTGCCCGGGCCTTCTGAGCTCCACGGTGCCCTCGGCACACAGGGGCTGCAGGGGAGTAGACGGCCTGCTTaGAGTGGGGGTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LPGPSELHGALGTQGLQGSRRPA*SGGSSS
Trigger: GCTGCTGGAACCCCCACTGCAAGCAGGCCGTCTACT...CCCCTGCAGCCCCTGTGTGCCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCTCCCGCCACGGGGACTaGTCGCCAAGGGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ERSKATAPTDLPGEAALGSRHGD*SPRAAW
Trigger: CCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGA...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGTCCCGCCACGGGGACTaGTCGCCAAGGGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: VLSVHSGVRWYSIHSTAASRHGD*SPRAAW
Trigger: CCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGA...CGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR GCA 90 bp GACAGGACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCTGCAGGGAACAGGGCTaGCTCCCAGCTCCCCTGACA +
Preference number: 4 (lower is better)
Translates to: DRTGSRHGDCSPRAAWTTCREQG*LPAPLT
Trigger: TGTCAGGGGAGCTGGGAGGCAGCCCTGTTCCCTGCA...GGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGTCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCCTGGTGAAGCGGCGCTaGGCAGGGGCTGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PGPSQGLQAPETQPQLSILVKRR*AGAAPC
Trigger: GCAGGGAGCAGCCCCTGCCCAGCGCCGCTTCACCAG...GATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GACAGGACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCTCCGCCACAGGTCCCTaGACTCCACAACCACAGCGT +
Preference number: 4 (lower is better)
Translates to: DRTGSRHGDCSPRAAWTTSATGP*TPQPQR
Trigger: ACGCTGTGGTTGTGGAGTTCAGGGACCTGTGGCGGA...GGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGTCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CTGCCCGGGCCTTCTGAGCTCCACGGTGCCCTCGGCACACAGGGGCTGCAGGGGCACGAGATGCCTGTGTaGGTGCTCATAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LPGPSELHGALGTQGLQGHEMPV*VLIGGQ
Trigger: CTGCCCTCCTATGAGCACGCACACAGGCATCTCGTG...CCCCTGCAGCCCCTGTGTGCCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGGAGGTTCAAACCGCCTaGTATGGCAGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPEVQTA*YGRLLS
Trigger: GCTCAGCAGCCTGCCATAGCAGGCGGTTTGAACCTC...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGTCAGGGCTGGTCCTCTaGAGGCTGTACCATACGCAG +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPSGLVL*RLYHTQ
Trigger: CTGCGTATGGTACAGCCTGCAGAGGACCAGCCCTGA...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCTCCACAACCACAGCGTaGAGCGAGGCTGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QPGPSQGLQAPETQPQLSSTTTA*SEAAWG
Trigger: GCCCCAGGCAGCCTCGCTGCACGCTGTGGTTGTGGA...GCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GCTGCGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTTCCACAACCACAGCGTaGAGCGAGGCTGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AAAWVLPQRVGLSFPALPSTTTA*SEAAWG
Trigger: GCCCCAGGCAGCCTCGCTGCACGCTGTGGTTGTGGA...AGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp CCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTTCGGCACACAGGGGCTaGAGGGGCACCGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGPARVFKPQRPSHNSASSAHRG*RGTGCW
Trigger: CCAGCAGCCGGTGCCCCTGCAGCCCCTGTGTGCCGA...AGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGTCGGCACACAGGGGCTaGAGGGGCACCGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VLSVHSGVRWYSIHSTAASAHRG*RGTGCW
Trigger: CCAGCAGCCGGTGCCCCTGCAGCCCCTGTGTGCCGA...CGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp CGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGACCGCTGCGTGGCTCTaGCCGGGCCTTCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RHGYSHSGWGSASLLSLKTAAWL*PGLLSS
Trigger: GGAGCTCAGAAGGCCCGGGCAGAGCCACGCAGCGGT...CTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp CAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCCTACTGCGGTCTCTGTaGCTGAGGGGAGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: QPGPSQGLQAPETQPQLSLLRSL*LRGGAR
Trigger: CCTGGCGCCTCCCCTCAGCCACAGAGACCGCAGTAG...GCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR CCA 90 bp GGCCTCTCAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACACATCACCATGGCACCTaGCCCCAGGTGCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GLSARAQPGSSSPRDPATHHHGT*PQVLVH
Trigger: GTGGACCAGCACCTGGGGCCAGGTGCCATGGTGATG...TGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTGAGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCCCTGGGGCATCACCATaGCACCTGGCCCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: QPGPSQGLQAPETQPQLSPGASP*HLAPGA
Trigger: AGCACCTGGGGCCAGGTGCCATGGTGATGCCCCAGG...GCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCCTGGTGAAGCGGCGCTaGGCAGGGGCTGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ERSKATAPTDLPGEAALGLVKRR*AGAAPC
Trigger: GCAGGGAGCAGCCCCTGCCCAGCGCCGCTTCACCAG...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCTGCGGTCTCTGTGGCTaGGGGGAGGCGCCAGGCACG +
Preference number: 4 (lower is better)
Translates to: GVLHLFQRQAGARPQGHACGLCG*GEAPGT
Trigger: CGTGCCTGGCGCCTCCCCTCAGCCACAGAGACCGCA...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR TCA 90 bp GGCCTCTCAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACATCCGCCACAGGTCCCTaGACTCCACAACCACAGCGT +
Preference number: 4 (lower is better)
Translates to: GLSARAQPGSSSPRDPATSATGP*TPQPQR
Trigger: ACGCTGTGGTTGTGGAGTTCAGGGACCTGTGGCGGA...TGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTGAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGCCTCTCAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACATGCCCAAGTCTGCCCTaGATCCGAGGACACCGGAAC +
Preference number: 4 (lower is better)
Translates to: GLSARAQPGSSSPRDPATCPSLP*IRGHRN
Trigger: GTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCA...TGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTGAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp AGGCTCCAGGAGGCCAGTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATCCGCCACAGGTCCTGTaGGGAAGGAGCAGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: RLQEASAERALRGQVVLHPPQVL*GRSSPV
Trigger: GACGGGGCTGCTCCTTCCTCACAGGACCTGTGGCGG...ATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGTCTCCGAGGCTGGTCTaGACGTGGATGGGAAATAGC +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPSPRLV*TWMGNS
Trigger: GCTATTTCCCATCCACGTGCAGACCAGCCTCGGAGA...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCGCACCTGGCCCCAGGTaGTGGTCCACAGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: KSRDPEILESETDRTGSRAPGPR*WSTAVR
Trigger: GCGGACCGCTGTGGACCAGCACCTGGGGCCAGGTGC...GCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGGCTCTGCCCGGGCCTTCTGAGCTCCACGGTGCCCTCGGCACACAGGGGCTGTCAAAGGTCAGGATCTaGCAGGGCTCGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VALPGPSELHGALGTQGLSKVRI*QGSERL
Trigger: CAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTTGA...CAGCCCCTGTGTGCCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAGAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGGGGGTGAAACTCCACTaGATAGCTGACAGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPGVKLH*IADSPW
Trigger: CCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCC...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGTGTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGTCCCGCCACGGGGACTaGTCGCCAAGGGCGGCGTGG +
Preference number: 4 (lower is better)
Translates to: VCERSKATAPTDLPGEAASRHGD*SPRAAW
Trigger: CCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGA...CGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCACACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GGCCTCTCAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACACCTCACCTTCTAAGCTaGGAGCCAGAGGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: GLSARAQPGSSSPRDPATPHLLS*EPEATG
Trigger: CCCAGTGGCCTCTGGCTCGCAGCTTAGAAGGTGAGG...TGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTGAGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGTGGCATGTCACCCTCTaGACCTACAGTCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPWHVTL*TYSHLG
Trigger: ACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCA...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGCACACGGGGCGCATCTaGCGGACTCTCTCATTCTTT +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPHTGRI*RTLSFF
Trigger: AAAGAATGAGAGAGTCCGCCAGATGCGCCCCGTGTG...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCTCGCCAAGGGCGGCGTaGACAACCCCACCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GVLHLFQRQAGARPQGHASPRAA*TTPPAS
Trigger: GCTGGCCGGTGGGGTTGTCCACGCCGCCCTTGGCGA...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTCGCCAAGGGCGGCGTaGACAACCCCACCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ARVFKPQRPSHNSASPPSSPRAA*TTPPAS
Trigger: GCTGGCCGGTGGGGTTGTCCACGCCGCCCTTGGCGA...GGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp TACTCCATCCATAGCACCGCTGCGTGGCTCTGCCCGGGCCTTCTGAGCTCCACGCAACGGGAGGGACGATaGCCTGCTCTCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: YSIHSTAAWLCPGLLSSTQREGR*PALRGW
Trigger: CCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTTG...CGTGGAGCTCAGAAGGCCCGGGCAGAGCCACGCAGCGGTGCTATGGATGGAGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR TCA 90 bp GGCCTCTCAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACACACGAGAGAACCACCTaGGCTCGGCCAGATGTCAGA +
Preference number: 4 (lower is better)
Translates to: GLSARAQPGSSSPRDPATHERTT*ARPDVR
Trigger: TCTGACATCTGGCCGAGCTCAGGTGGTTCTCTCGTG...TGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTGAGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAGGCATCTCCTCTGGGTCTaGGTGTGCCCAGAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GYSHSGWGSASLLSLKSRHLLWV*VCPEGG
Trigger: GCCCCCTTCTGGGCACACTCAGACCCAGAGGAGATG...CCTGGACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR TCA 90 bp AAAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGTGCTCCACCCCCAGGTaGTGGGCCAGCACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: KGQDLPGLGEAAAWVLPQCSTPR*WASTES
Trigger: GCTCTCCGTGCTGGCCCATCACCTGGGGGTGGAGCA...CTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp GGAGAGGAGGGCCTTCAGCCTTCCCCGCTAGAAAGCCATGAGCCACTCAGAACCCCGGGTGTCCCGAGCTaGCCCACGCGGAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GEEGLQPSPLESHEPLRTPGVPS*PTRRSP
Trigger: TGGACTCCTCCGCGTGGGGCAGCTCGGGACACCCGG...GGTTCTGAGTGGCTCATGGCTTTCTAGCGGGGAAGGCTGAAGGCCCTCCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR GCA 90 bp CATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACAGGGGCACCCGGCTGCACTaGAGAGCCGGGGCCAGCCTA +
Preference number: 4 (lower is better)
Translates to: HTPPAGGAFQSEGGAGNRGTRLH*RAGASL
Trigger: TAGGCTGGCCCCGGCTCTGCAGTGCAGCCGGGTGCC...CCTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR GCA 90 bp CGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGGTCACAGACAGAGGGTaGGCCAGGGCAGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: RHGYSHSGWGSASLLSLKVTDRG*ARAALH
Trigger: GTGGAGAGCTGCCCTGGCGCACCCTCTGTCTGTGAC...CTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp AGGACAGGCACTGCCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCGCACCTGGCCCCAGGTaGTGGTCCACAGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: RTGTAQVCPESEDTGTLLAPGPR*WSTAVR
Trigger: GCGGACCGCTGTGGACCAGCACCTGGGGCCAGGTGC...GAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCAGCGTGCAGCGAGGCTaGCTGGGGCATCACCATGGC +
Preference number: 4 (lower is better)
Translates to: KVRICQGSERLRHGYSHSSVQRG*LGHHHG
Trigger: GCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCT...GCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp CCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTTCCACAACCACAGCGTaGAGCGAGGCTGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PGPARVFKPQRPSHNSASSTTTA*SEAAWG
Trigger: GCCCCAGGCAGCCTCGCTGCACGCTGTGGTTGTGGA...AGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCGGCACACAGGGGCTaGAGGGGCACCGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SQKSRDPEILESETDRTGSAHRG*RGTGCW
Trigger: CCAGCAGCCGGTGCCCCTGCAGCCCCTGTGTGCCGA...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGACCGCTGCGTGGCTCTaGCCGGGCCTTCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: VREARPRHLLTFLVKRRWTAAWL*PGLLSS
Trigger: GGAGCTCAGAAGGCCCGGGCAGAGCCACGCAGCGGT...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000441236.3
CDS-3UTR GCA 90 bp AGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCCACGGGCAGGCCACCAGCTGGTaGAGCACTGAGGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: RDPEILESETDRTGSRHGQATSW*STEARH
Trigger: GTGTCTGGCCTCAGTGCTGCACCAGCTGGTGGCCTG...CCCGTGGCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCACAGAGCCCCGCGAGTaGCAGGCACCCGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: GVLHLFQRQAGARPQGHATEPRE*QAPGCT
Trigger: AGTGCAGCCGGGTGCCTGCCACTCGCGGGGCTCTGT...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR CCA 90 bp GGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGGGTGGGACCCCGTGGTCGGATTaGCCCGACTGCAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: GSARARRGCGMGTPTAGGTPWSD*PDCRRS
Trigger: AGATCTTCTGCAGTCGGGCCAATCCGACCACGGGGT...CCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp CTGCCCGGGCCTTCTGAGCTCCACGGTGCCCTCGGCACACAGGGGCTGCAGGGGCACAGGCTCCTCTTGTaGCAGGAAGTACACACACTG +
Preference number: 4 (lower is better)
Translates to: LPGPSELHGALGTQGLQGHRLLL*QEVHTL
Trigger: CAGTGTGTGTACTTCCTGCCACAAGAGGAGCCTGTG...CCCCTGCAGCCCCTGTGTGCCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp AAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGGAGAGGCTGCGGCATaGGTACTCCCACAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: KVRICQGSERLRHGYSHSGEAAA*VLPQRV
Trigger: CACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCC...GCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp GGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGGGTGGGAGGGGCACCGGCTGCTaGAAGTCAAAGGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: GSARARRGCGMGTPTAGGRGTGC*KSKVRI
Trigger: GATCCTGACCTTTGACTTCCAGCAGCCGGTGCCCCT...CCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGCTGGGTTCTCTCACGTaGTGTCTGCTGTTACCTCTG +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPLGSLT*CLLLPL
Trigger: CAGAGGTAACAGCAGACACCACGTGAGAGAACCCAG...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTTACAGGCGGCTCGGCTaGCCTGGCACAAGCCTCACC +
Preference number: 4 (lower is better)
Translates to: PGPARVFKPQRPSHNSASYRRLG*PGTSLT
Trigger: GGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTA...AGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCCATAGCACCGCTGCGTaGCTCTGCCCGGGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: ERSKATAPTDLPGEAALGHSTAA*LCPGLL
Trigger: AAGCAGGCCCGGGCAGAGCCACGCAGCGGTGCTATG...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR TCA 90 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCCCAGGAGGCCAGTGCTaGGCGTGCACTCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PKSALNPRTPELCSYRRLPGGQC*ACTPGS
Trigger: TGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGG...GAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp AGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCCACGGGTGCCCAAGTCTGCCCTaGATCCGAGGACACCGGAAC +
Preference number: 4 (lower is better)
Translates to: RDPEILESETDRTGSRHGCPSLP*IRGHRN
Trigger: GTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCA...CCCGTGGCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGGCTCTGCCCGGGCCTTCTGAGCTCCACGGTGCCCTCGGCACACAGGGGCTGTCGGATTGGCCCGACTaGAGAAGATCTTCATGGTGC +
Preference number: 4 (lower is better)
Translates to: VALPGPSELHGALGTQGLSDWPD*RRSSWC
Trigger: GCACCATGAAGATCTTCTGCAGTCGGGCCAATCCGA...CAGCCCCTGTGTGCCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAGAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp CGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGCTCTGTCCTTCACCCTaGTCACGGCAGCCCGGATAC +
Preference number: 4 (lower is better)
Translates to: RHGYSHSGWGSASLLSLKLCPSP*SRQPGY
Trigger: GTATCCGGGCTGCCGTGAGCAGGGTGAAGGACAGAG...CTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp CCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTGTCACAGACAGAGGGTaGGCCAGGGCAGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PGPARVFKPQRPSHNSASVTDRG*ARAALH
Trigger: GTGGAGAGCTGCCCTGGCGCACCCTCTGTCTGTGAC...AGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GCTGCGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTTCAGGGCTGGTCCTCTaGAGGCTGTACCATACGCAG +
Preference number: 4 (lower is better)
Translates to: AAAWVLPQRVGLSFPALPSGLVL*RLYHTQ
Trigger: CTGCGTATGGTACAGCCTGCAGAGGACCAGCCCTGA...AGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCAGGGCTCGGAGAGGCTaGGGCATGGGTACTCCCACA +
Preference number: 4 (lower is better)
Translates to: ERSKATAPTDLPGEAALGRARRG*GMGTPT
Trigger: TGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCT...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCAGGGCTCGGAGAGGCTaGGGCATGGGTACTCCCACA +
Preference number: 4 (lower is better)
Translates to: KVRICQGSERLRHGYSHSRARRG*GMGTPT
Trigger: TGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCT...GCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp CAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCCTGCTCTGGGACAGCTaGCTTGTGTCCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: QPGPSQGLQAPETQPQLSLLWDS*LVSSLR
Trigger: CCTGAGACTGGACACAAGGCAGCTGTCCCAGAGCAG...GCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AGGACAGGCACTGCCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCGGCTCTGCCCGGGCCTaGTTCAGCTCCCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RTGTAQVCPESEDTGTLLGSARA*FSSQEG
Trigger: ACCCTCCTGGGAGCTGAAGCAGGCCCGGGCAGAGCC...GAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR GCA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCACCGCTGCGTGGCTCTaGCCGGGCCTGCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SQKSRDPEILESETDRTGTAAWL*PGLLQL
Trigger: GAGCTGAAGCAGGCCCGGGCAGAGCCACGCAGCGGT...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR CCA 90 bp GCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGTGGCTCTACTCCACAGACCCCGTaGTCGGATTGGCCCGACTGC +
Preference number: 4 (lower is better)
Translates to: ACTPGSGGTPSIAPLRGSTPQTP*SDWPDC
Trigger: GCAGTCGGGCCAATCCGACCACGGGGTCTGTGGAGT...AGAGCCACGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CCA 90 bp TACTCCATCCATAGCACCGCTGCGTGGCTCTGCCCGGGCCTTCTGAGCTCCACGGCTGTGCATAGACGGTaGCTCTGTGGGGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: YSIHSTAAWLCPGLLSSTAVHRR*LCGARP
Trigger: AGGCCGTGCCCCACAGAGCCACCGTCTATGCACAGC...CGTGGAGCTCAGAAGGCCCGGGCAGAGCCACGCAGCGGTGCTATGGATGGAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGAGGCTGGTCTGCACGTaGATGGGAAATAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPRLVCT*MGNSLF
Trigger: GAACAAGCTATTTCCCATCCACGTGCAGACCAGCCT...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GGCCTCTCAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACATCAAACCGCCTGCTATaGCAGGCTGCTGAGCTACTG +
Preference number: 4 (lower is better)
Translates to: GLSARAQPGSSSPRDPATSNRLL*QAAELL
Trigger: CAGTAGCTCAGCAGCCTGCCATAGCAGGCGGTTTGA...TGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTGAGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GTCAAAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACCTGGGGCATCACCATaGCACCTGGCCCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VKGQDLPGLGEAAAWVLPPGASP*HLAPGA
Trigger: AGCACCTGGGGCCAGGTGCCATGGTGATGCCCCAGG...TGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp GCTGCGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTCACTCCGGGGTCAGGTaGTACTCCATCCATAGCACC +
Preference number: 4 (lower is better)
Translates to: AAAWVLPQRVGLSFPALPHSGVR*YSIHST
Trigger: GGTGCTATGGATGGAGTACCACCTGACCCCGGAGTG...AGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCTCCAGTCTCAGGTCCTaGCAGGCCACCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ERSKATAPTDLPGEAALGSSLRS*QATSWC
Trigger: GCACCAGCTGGTGGCCTGCCAGGACCTGAGACTGGA...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTTGTCTGGTGAAGCGGCGCTaGGCAGGGGCTGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: QPLSWACISGTALGQLPCLVKRR*AGAAPC
Trigger: GCAGGGAGCAGCCCCTGCCCAGCGCCGCTTCACCAG...ACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCTACAGGCGGCTCGGCTaGCCTGGCACAAGCCTCACC +
Preference number: 4 (lower is better)
Translates to: GVLHLFQRQAGARPQGHAYRRLG*PGTSLT
Trigger: GGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTA...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACCTCGGTAGGCCGAGGTaGGGATCGCTTGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNLGRPR*GSLEPR
Trigger: CCTGGGCTCAAGCGATCCTCACCTCGGCCTACCGAG...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGAGAGGAGGGCCTTCAGCCTTCCCCGCTAGAAAGCCATGAGCCACTCAGAACCCAACGGGAGGGACGATaGCCTGCTCTCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GEEGLQPSPLESHEPLRTQREGR*PALRGW
Trigger: CCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTTG...GGTTCTGAGTGGCTCATGGCTTTCTAGCGGGGAAGGCTGAAGGCCCTCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCAGGCTGCCATCGCTaGCACACAGGCACACGCTGT +
Preference number: 4 (lower is better)
Translates to: VREARPRHLLTFLVKRRWAGCHR*HTGTRC
Trigger: ACAGCGTGTGCCTGTGTGTCAGCGATGGCAGCCTGC...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGCCAGGAGGCCAGTGCTaGGCGTGCACTCCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKPGGQC*ACTPGS
Trigger: TGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGG...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGTGGCTCTGATCTGGGGCAGGGCTaGAGAAGTAGACGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ACTPGSGGTPSIAPLRGSDLGQG*RSRRPA
Trigger: AGCAGGCCGTCTACTTCTTCAGCCCTGCCCCAGATC...AGAGCCACGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR TCA 90 bp AGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCCACGGGAGGGGCTTTCCAATCTaGGGGAGGTGCAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: RDPEILESETDRTGSRHGRGFPI*GRCREQ
Trigger: CTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCT...CCCGTGGCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGTCACAGACAGAGGGTaGGCCAGGGCAGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: VREARPRHLLTFLVKRRWVTDRG*ARAALH
Trigger: GTGGAGAGCTGCCCTGGCGCACCCTCTGTCTGTGAC...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCGTCACAGACAGAGGGTaGGCCAGGGCAGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GVLHLFQRQAGARPQGHAVTDRG*ARAALH
Trigger: GTGGAGAGCTGCCCTGGCGCACCCTCTGTCTGTGAC...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGTGTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGAGCGTGCAGCGAGGCTaGCTGGGGCATCACCATGGC +
Preference number: 4 (lower is better)
Translates to: VCERSKATAPTDLPGEAASVQRG*LGHHHG
Trigger: GCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCT...CGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCACACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTTGCAGGGGCACCGGCTaGTGGAAGTCAAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PGPARVFKPQRPSHNSASCRGTG*WKSKVR
Trigger: CCTGACCTTTGACTTCCAGCAGCCGGTGCCCCTGCA...AGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCTGCAGGGGCACCGGCTaGTGGAAGTCAAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ERSKATAPTDLPGEAALGCRGTG*WKSKVR
Trigger: CCTGACCTTTGACTTCCAGCAGCCGGTGCCCCTGCA...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCCTGCATCTCAGGAACTaGTCTGGGACAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: QPGPSQGLQAPETQPQLSLHLRN*SGTAAL
Trigger: CAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAG...GCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGCCTCACCTTCTAAGCTaGGAGCCAGAGGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: VLSVHSGVRWYSIHSTAAPHLLS*EPEATG
Trigger: CCCAGTGGCCTCTGGCTCGCAGCTTAGAAGGTGAGG...CGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR GCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCGTTCCTGCCCCCAACTaGAGGACAGGCACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: ERSKATAPTDLPGEAALGVPAPN*RTGTAQ
Trigger: TTGGGCAGTGCCTGTCCTGCAGTTGGGGGCAGGAAC...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GCTGCGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTTGGCATGTCACCCTCTaGACCTACAGTCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: AAAWVLPQRVGLSFPALPWHVTL*TYSHLG
Trigger: ACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCA...AGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCCAGGCACACGCTGTCTaGCTTCAGCACGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ERSKATAPTDLPGEAALGQAHAV*LQHGPQ
Trigger: CTGAGGACCGTGCTGAAGCCAGACAGCGTGTGCCTG...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGTGGCTCTCAGGCACACGCTGTCTaGCTTCAGCACGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ACTPGSGGTPSIAPLRGSQAHAV*LQHGPQ
Trigger: CTGAGGACCGTGCTGAAGCCAGACAGCGTGTGCCTG...AGAGCCACGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CCA 90 bp AGGACAGGCACTGCCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCCCTGGGGCATCACCATaGCACCTGGCCCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RTGTAQVCPESEDTGTLLPGASP*HLAPGA
Trigger: AGCACCTGGGGCCAGGTGCCATGGTGATGCCCCAGG...GAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp ACAAGATGCAACACGGCGCAGTCTTTCCCATCCCTGAGGCCGAGCAGCTCCCAGCATAGCACCGCTGCGTaGCTCTGCCCGGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TRCNTAQSFPSLRPSSSQHSTAA*LCPGLL
Trigger: CAGAAGGCCCGGGCAGAGCCACGCAGCGGTGCTATG...CTGGGAGCTGCTCGGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000441236.3
CDS-3UTR CCA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGTGGCAGGCCACCAGCTaGTGCAGCACTGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: VREARPRHLLTFLVKRRWWQATS*CSTEAR
Trigger: TCTGGCCTCAGTGCTGCACCAGCTGGTGGCCTGCCA...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCGGCTCGGCTGGCCTaGCACAAGCCTCACCTTCTA +
Preference number: 4 (lower is better)
Translates to: VREARPRHLLTFLVKRRWAARLA*HKPHLL
Trigger: TAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGC...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCCATCTCCTCTGGGTCTaGGTGTGCCCAGAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SQKSRDPEILESETDRTGHLLWV*VCPEGG
Trigger: GCCCCCTTCTGGGCACACTCAGACCCAGAGGAGATG...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp CAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCTTCTGTCCTGGTCATTaGTCTCTCCAAACCGAGGCC +
Preference number: 4 (lower is better)
Translates to: QPGPSQGLQAPETQPQLSFCPGH*SLQTEA
Trigger: GGCCTCGGTTTGGAGAGATCAATGACCAGGACAGAA...GCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp CGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAGGGCACGCTTAATCATGCAGGCTGCCATCGCTaGCACACAGGCACACGCTGT +
Preference number: 4 (lower is better)
Translates to: RVGLSFPALPEVQGTLNHAGCHR*HTGTRC
Trigger: ACAGCGTGTGCCTGTGTGTCAGCGATGGCAGCCTGC...ATGATTAAGCGTGCCCTGGACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR TCA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGATGCTCCACCCCCAGGTaGTGGGCCAGCACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PETQPQLSISTLLAEARRCSTPR*WASTES
Trigger: GCTCTCCGTGCTGGCCCATCACCTGGGGGTGGAGCA...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCTCTGCCCGGGCCTTCTaGGCTCCACGGTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GQQCKDATRCNTAQSFPSSARAF*APRCPR
Trigger: CCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAGA...GGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000441236.3
CDS-3UTR TCA 90 bp GTCCAGGGCACGCTTAATCATGTCGTCCATGATGTGCACGTCGAAGCCTTCGCATCTGCCCGGGCCTTCTaGGCTCCACGGTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: VQGTLNHVVHDVHVEAFASARAF*APRCPR
Trigger: CCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAGA...TGCGAAGGCTTCGACGTGCACATCATGGACGACATGATTAAGCGTGCCCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp CCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTGTGCCAAGGACACCATaGTCGCTGCACACAGAACCC +
Preference number: 4 (lower is better)
Translates to: PGPARVFKPQRPSHNSASVPRTP*SLHTEP
Trigger: GGGTTCTGTGTGCAGCGAGCATGGTGTCCTTGGCAC...AGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR GCA 90 bp AAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCCTGCCGAAACCCTGGTaGCAAGGACACCATGCTCGC +
Preference number: 4 (lower is better)
Translates to: KSRDPEILESETDRTGSRLPKPW*QGHHAR
Trigger: GCGAGCATGGTGTCCTTGGCACCAGGGTTTCGGCAG...GCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR GCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCCCTCGATCACACCACTaGACTCAGCCTAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ERSKATAPTDLPGEAALGPRSHH*TQPRQQ
Trigger: CTGCTGCCTAGGCTGAGTGCAGTGGTGTGATCGAGG...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGCACGAGATGCCTGTGTaGGTGCTCATAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VLSVHSGVRWYSIHSTAAHEMPV*VLIGGQ
Trigger: CTGCCCTCCTATGAGCACGCACACAGGCATCTCGTG...CGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp CCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTGAGGTTCAAACCGCCTaGTATGGCAGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PGPARVFKPQRPSHNSASEVQTA*YGRLLS
Trigger: GCTCAGCAGCCTGCCATAGCAGGCGGTTTGAACCTC...AGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAACCGCTGCGTGGCTCTaGCCGGGCCTTCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PETQPQLSISTLLAEARRTAAWL*PGLLSS
Trigger: GGAGCTCAGAAGGCCCGGGCAGAGCCACGCAGCGGT...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000441236.3
CDS-3UTR GCA 90 bp GCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCCCCTCTCATGCTTCCTaGCACAGCTGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ARVFKPQRPSHNSASPPSPSHAS*HSWSQR
Trigger: CCTCTGGCTCCAGCTGTGGCAGGAAGCATGAGAGGG...GGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCCCACTTTCCTGGGCCTaGATCTCAGGAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGPSQGLQAPETQPQLSIPLSWA*ISGTAL
Trigger: CAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGG...GATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCCCTCACCTTCTAAGCTaGGAGCCAGAGGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: GVLHLFQRQAGARPQGHAPHLLS*EPEATG
Trigger: CCCAGTGGCCTCTGGCTCGCAGCTTAGAAGGTGAGG...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCAGGACACCGGAACTCTaGTCATACAGGCGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: KSRDPEILESETDRTGSRRTPEL*SYRRLG
Trigger: GCCGAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCT...GCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCCTTCAGCCTTCCCCGCTAGAAAGCCATGAGCCACTCAGAACCTCCGCTCGCCTCCGCTaGTACCACTTTTACCGCGGC +
Preference number: 4 (lower is better)
Translates to: GEEGLQPSPLESHEPLRTSARLR*YHFYRG
Trigger: GCCGCGGTAAAAGTGGTAGCAGCGGAGGCGAGCGGA...GGTTCTGAGTGGCTCATGGCTTTCTAGCGGGGAAGGCTGAAGGCCCTCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CTGCCCGGGCCTTCTGAGCTCCACGGTGCCCTCGGCACACAGGGGCTGCAGGGGTTCAGCAGGCTTCGGTaGTTCCAAAAGGTTCAAATG +
Preference number: 4 (lower is better)
Translates to: LPGPSELHGALGTQGLQGFSRLR*FQKVQM
Trigger: CATTTGAACCTTTTGGAAGCACCGAAGCCTGCTGAA...CCCCTGCAGCCCCTGTGTGCCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp TGCGTGGCTCTGCCCGGGCCTTCTGAGCTCCACGGTGCCCTCGGCACACAGGGGCTATTAACAGCACAATaGCCCAAAATGTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: CVALPGPSELHGALGTQGLLTAQ*PKMWRG
Trigger: CCCCCTCCACATTTTGGGGCATTGTGCTGTTAATAG...CCCCTGTGTGCCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAGAGCCACGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGCCAGTTGAGTTCTTGTaGACAAGTCTGACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPPVEFL*TSLTVR
Trigger: TCTGACAGTCAGACTTGTCCACAAGAACTCAACTGG...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCACTCCACAGACCCCGTaGTCGGATTGGCCCGACTGC +
Preference number: 4 (lower is better)
Translates to: SQKSRDPEILESETDRTGTPQTP*SDWPDC
Trigger: GCAGTCGGGCCAATCCGACCACGGGGTCTGTGGAGT...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AGGCTCCAGGAGGCCAGTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATGATGTTGGCACGGCATaGCATGTCACCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: RLQEASAERALRGQVVLHDVGTA*HVTLWT
Trigger: GGTCCAGAGGGTGACATGCCATGCCGTGCCAACATC...ATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CCA 90 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCGCTGTGCATAGACGGTaGCTCTGTGGGGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: PKSALNPRTPELCSYRRLAVHRR*LCGARP
Trigger: AGGCCGTGCCCCACAGAGCCACCGTCTATGCACAGC...GAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GTGTGTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGGCTGTGCATAGACGGTaGCTCTGTGGGGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: VCERSKATAPTDLPGEAAAVHRR*LCGARP
Trigger: AGGCCGTGCCCCACAGAGCCACCGTCTATGCACAGC...CGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCACACACTGCATCCAGTaGTCCCGCCACTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: AWVLPQRVGLSFPALPEVTHCIQ*SRHCIS
Trigger: GGAGATGCAGTGGCGGGACCACTGGATGCAGTGTGT...GACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTACTCCCACAGCGGGTaGGGCTCAGCTTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SQKSRDPEILESETDRTGYSHSG*GSASLL
Trigger: GAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTA...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACTCCAGTCTCAGGTCCTaGCAGGCCACCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNSSLRS*QATSWC
Trigger: GCACCAGCTGGTGGCCTGCCAGGACCTGAGACTGGA...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACAGGGCGGCTCGGCTGGCCTaGCACAAGCCTCACCTTCTA +
Preference number: 4 (lower is better)
Translates to: HTPPAGGAFQSEGGAGNRAARLA*HKPHLL
Trigger: TAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGC...CCTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTCTCGGTAGGCCGAGGTaGGGATCGCTTGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GARGQQCKDATRCNTAQSLGRPR*GSLEPR
Trigger: CCTGGGCTCAAGCGATCCTCACCTCGGCCTACCGAG...AGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GACAGGACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCATATCTGCATAAGATaGCCTTGCAATCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: DRTGSRHGDCSPRAAWTTHICIR*PCNLLV
Trigger: CACCAGGAGATTGCAAGGTCATCTTATGCAGATATG...GGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGTCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGTGGCTCTTGTGACCGCCATCATTaGCAAGAGTCCCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: ACTPGSGGTPSIAPLRGSCDRHH*QESRAS
Trigger: ACTGGCACGGGACTCTTGTCAATGATGGCGGTCACA...AGAGCCACGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR TCA 90 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTCAACGGGAGGGACGATaGCCTGCTCTCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GARGQQCKDATRCNTAQSQREGR*PALRGW
Trigger: CCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTTG...AGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp TGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACAGTCACCAACGGGAGGGACGATaGCCTGCTCTCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CDQDVGTAWHVTLWTYSHQREGR*PALRGW
Trigger: CCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTTG...GTGACTGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR TCA 90 bp AAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGCTATGGCAGGCTGCTaGGCTACTGACTTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KVRICQGSERLRHGYSHSAMAGC*ATDLLA
Trigger: AGCAAGCAAGTCAGTAGCTCAGCAGCCTGCCATAGC...GCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR TCA 90 bp GTGGCTCTGTGGGGCACGGCCTCACAATTTTCCTCCACGAGATGCCTGTGTGCGGGGCCATGGTGCACTTaGTCTTCCCCTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VALWGTASQFSSTRCLCAGPWCT*SSPQGP
Trigger: TGGACCCTGAGGGGAAGATCAAGTGCACCATGGCCC...CGCACACAGGCATCTCGTGGAGGAAAATTGTGAGGCCGTGCCCCACAGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR TCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGCATCTCCTCTGGGTCTaGGTGTGCCCAGAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKHLLWV*VCPEGG
Trigger: GCCCCCTTCTGGGCACACTCAGACCCAGAGGAGATG...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GTGTGTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGTACCAGATAGAGCGCTaGGCCCTGCACCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: VCERSKATAPTDLPGEAAYQIER*ALHHRL
Trigger: GAGCCTGTGGTGCAGGGCTCAGCGCTCTATCTGGTA...CGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCACACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAGGTTCTGTCCTGGTCATTaGTCTCTCCAAACCGAGGCC +
Preference number: 4 (lower is better)
Translates to: GYSHSGWGSASLLSLKSRFCPGH*SLQTEA
Trigger: GGCCTCGGTTTGGAGAGATCAATGACCAGGACAGAA...CCTGGACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR TCA 90 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCTCCGCCACAGGTCCCTaGACTCCACAACCACAGCGT +
Preference number: 4 (lower is better)
Translates to: PKSALNPRTPELCSYRRLSATGP*TPQPQR
Trigger: ACGCTGTGGTTGTGGAGTTCAGGGACCTGTGGCGGA...GAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATTCTGCCCGGGCCTTCTaGGCTCCACGGTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: EASSAKMQQDATRRSLSHSARAF*APRCPR
Trigger: CCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAGA...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000441236.3
CDS-3UTR TCA 90 bp CATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACAGGACTCCACTGCATAGCTaGCAGTCCGTGGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: HTPPAGGAFQSEGGAGNRTPLHS*QSVGHP
Trigger: TGGGTGGCCCACGGACTGTCAGCTATGCAGTGGAGT...CCTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGGAGATCCTCGAGAGTaGGACAGACAGGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: VREARPRHLLTFLVKRRWGDPRE*DRQDRL
Trigger: GAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCC...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp ACAAGATGCAACACGGCGCAGTCTTTCCCATCCCTGAGGCCGAGCAGCTCCCAGTGCCCAAGTCTGCCCTaGATCCGAGGACACCGGAAC +
Preference number: 4 (lower is better)
Translates to: TRCNTAQSFPSLRPSSSQCPSLP*IRGHRN
Trigger: GTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCA...CTGGGAGCTGCTCGGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GACAGGACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCTTTCCTTACTGGTGCTaGAAGGAAGGATGGATAACG +
Preference number: 4 (lower is better)
Translates to: DRTGSRHGDCSPRAAWTTFPYWC*KEGWIT
Trigger: CGTTATCCATCCTTCCTTTCAGCACCAGTAAGGAAA...GGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGTCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp CTGCCCGGGCCTTCTGAGCTCCACGGTGCCCTCGGCACACAGGGGCTGCAGGGGCTATGCAAAATGGAGTaGTACGTTCTTCAGGGATCA +
Preference number: 4 (lower is better)
Translates to: LPGPSELHGALGTQGLQGLCKME*YVLQGS
Trigger: TGATCCCTGAAGAACGTATCACTCCATTTTGCATAG...CCCCTGCAGCCCCTGTGTGCCGAGGGCACCGTGGAGCTCAGAAGGCCCGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR TCA 90 bp GTGTGTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGATCTTCCTGAGCTTCTaGGCTCCACGGTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: VCERSKATAPTDLPGEAAIFLSF*APRCPR
Trigger: CCGAGGGCACCGTGGAGCTCAGAAGCTCAGGAAGAT...CGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCACACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR TCA 90 bp AGGCTCCAGGAGGCCAGTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATAAGCTCCCATCTTCCTaGGCTTCTGAGCTCCACGGT +
Preference number: 4 (lower is better)
Translates to: RLQEASAERALRGQVVLHKLPSS*ASELHG
Trigger: ACCGTGGAGCTCAGAAGCTCAGGAAGATGGGAGCTT...ATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR GCA 90 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTGCCAGGCACGAGTACTaGGACAGAGCCCCGCGAGTG +
Preference number: 4 (lower is better)
Translates to: GARGQQCKDATRCNTAQSARHEY*DRAPRV
Trigger: CACTCGCGGGGCTCTGTCGCAGTACTCGTGCCTGGC...AGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR GCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCCCTCGATCACACCACTaGACTCAGCCTAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GVLHLFQRQAGARPQGHAPRSHH*TQPRQQ
Trigger: CTGCTGCCTAGGCTGAGTGCAGTGGTGTGATCGAGG...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCCCTCGATCACACCACTaGACTCAGCCTAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KSRDPEILESETDRTGSRPRSHH*TQPRQQ
Trigger: CTGCTGCCTAGGCTGAGTGCAGTGGTGTGATCGAGG...GCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCCTCTGTCCTTCACCCTaGTCACGGCAGCCCGGATAC +
Preference number: 4 (lower is better)
Translates to: PKSALNPRTPELCSYRRLLCPSP*SRQPGY
Trigger: GTATCCGGGCTGCCGTGAGCAGGGTGAAGGACAGAG...GAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GGCAGCGCCCCCTCCCCGATCAGCTCTGTGTCAAACAACTCTGTGACCAGGATGCTCTGTCCTTCACCCTaGTCACGGCAGCCCGGATAC +
Preference number: 4 (lower is better)
Translates to: GSAPSPISSVSNNSVTRMLCPSP*SRQPGY
Trigger: GTATCCGGGCTGCCGTGAGCAGGGTGAAGGACAGAG...CATCCTGGTCACAGAGTTGTTTGACACAGAGCTGATCGGGGAGGGGGCGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000562381.7
CDS-3UTR GCA 90 bp ACGTCAACGGGAGGGACGATGACCTGCTCTCCGAGGCTGGTCTGCACGTGGATGCACGAGATGCCTGTGTaGGTGCTCATAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TSTGGTMTCSPRLVCTWMHEMPV*VLIGGQ
Trigger: CTGCCCTCCTATGAGCACGCACACAGGCATCTCGTG...CATCCACGTGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTTGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR GCA 90 bp GTGTGTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCAGTGGTCCCGCCACTaGATCTCCTCTGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: VCERSKATAPTDLPGEAAQWSRH*ISSGSE
Trigger: CTCAGACCCAGAGGAGATGCAGTGGCGGGACCACTG...CGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCACACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTAGGAAGTACACACACTaGATCCAGTGGTCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PGPARVFKPQRPSHNSASRKYTH*IQWSRH
Trigger: GTGGCGGGACCACTGGATGCAGTGTGTGTACTTCCT...AGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCGGAGAGAGACCTTTCTaGCCTGTAGGTCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: QPGPSQGLQAPETQPQLSGERPF*PVGPHL
Trigger: CAAATGAGGACCTACAGGGCAGAAAGGTCTCTCTCC...GCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCTCCACAACCACAGCGTaGAGCGAGGCTGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HSWSQRPAVQRCNKMQHGSTTTA*SEAAWG
Trigger: GCCCCAGGCAGCCTCGCTGCACGCTGTGGTTGTGGA...GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACAGTAGACGGCCTGCTTaGAGTGGGGGTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNSRRPA*SGGSSS
Trigger: GCTGCTGGAACCCCCACTGCAAGCAGGCCGTCTACT...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACAGGCCCTCTCATGCTTCCTaGCACAGCTGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: HTPPAGGAFQSEGGAGNRPSHAS*HSWSQR
Trigger: CCTCTGGCTCCAGCTGTGGCAGGAAGCATGAGAGGG...CCTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTTGTCAGGCCACCAGCTGGTaGAGCACTGAGGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: QPLSWACISGTALGQLPCQATSW*STEARH
Trigger: GTGTCTGGCCTCAGTGCTGCACCAGCTGGTGGCCTG...ACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTCTGCATCTCAGGAACTaGTCTGGGACAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PGPARVFKPQRPSHNSASLHLRN*SGTAAL
Trigger: CAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAG...AGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCCTTCAGCCTTCCCCGCTAGAAAGCCATGAGCCACTCAGAACCGGCACTGCCCAAGTCTaGCCTGAATCCGAGGACACC +
Preference number: 4 (lower is better)
Translates to: GEEGLQPSPLESHEPLRTGTAQV*PESEDT
Trigger: GGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCC...GGTTCTGAGTGGCTCATGGCTTTCTAGCGGGGAAGGCTGAAGGCCCTCCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACGTTCCTGCCCCCAACTaGAGGACAGGCACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNVPAPN*RTGTAQ
Trigger: TTGGGCAGTGCCTGTCCTGCAGTTGGGGGCAGGAAC...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCGTTCCTGCCCCCAACTaGAGGACAGGCACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SQKSRDPEILESETDRTGVPAPN*RTGTAQ
Trigger: TTGGGCAGTGCCTGTCCTGCAGTTGGGGGCAGGAAC...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCGATGTTGGCACGGCATaGCATGTCACCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: KSRDPEILESETDRTGSRDVGTA*HVTLWT
Trigger: GGTCCAGAGGGTGACATGCCATGCCGTGCCAACATC...GCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTAGGCTGGTCTGCACGTaGATGGGAAATAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RARRGCGMGTPTAGGAQLRLVCT*MGNSLF
Trigger: GAACAAGCTATTTCCCATCCACGTGCAGACCAGCCT...AAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp GCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCACACACTGCATCCAGTaGTCCCGCCACTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: ARVFKPQRPSHNSASPPSTHCIQ*SRHCIS
Trigger: GGAGATGCAGTGGCGGGACCACTGGATGCAGTGTGT...GGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCACACACTGCATCCAGTaGTCCCGCCACTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GVLHLFQRQAGARPQGHATHCIQ*SRHCIS
Trigger: GGAGATGCAGTGGCGGGACCACTGGATGCAGTGTGT...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp TACTCCATCCATAGCACCGCTGCGTGGCTCTGCCCGGGCCTTCTGAGCTCCACGCACACGGGGCGCATCTaGCGGACTCTCTCATTCTTT +
Preference number: 4 (lower is better)
Translates to: YSIHSTAAWLCPGLLSSTHTGRI*RTLSFF
Trigger: AAAGAATGAGAGAGTCCGCCAGATGCGCCCCGTGTG...CGTGGAGCTCAGAAGGCCCGGGCAGAGCCACGCAGCGGTGCTATGGATGGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp CCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCACGGTCCTCAGAGCCTaGACGTATCGATCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PGPSQGLQAPETQPQLSITVLRA*TYRSVL
Trigger: CAGAACTGATCGATACGTCCAGGCTCTGAGGACCGT...GATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp ACAAGATGCAACACGGCGCAGTCTTTCCCATCCCTGAGGCCGAGCAGCTCCCAGCAGGCACACGCTGTCTaGCTTCAGCACGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TRCNTAQSFPSLRPSSSQQAHAV*LQHGPQ
Trigger: CTGAGGACCGTGCTGAAGCCAGACAGCGTGTGCCTG...CTGGGAGCTGCTCGGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGTGGGGAGAGGCTGCGGCATaGGTACTCCCACAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: DDVACVGVKLHCIADSPWGEAAA*VLPQRV
Trigger: CACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCC...CCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCAGGGGCACCGGCTGCTaGAAGTCAAAGGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: GVLHLFQRQAGARPQGHARGTGC*KSKVRI
Trigger: GATCCTGACCTTTGACTTCCAGCAGCCGGTGCCCCT...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAGCACATAGCACCGCTGCGTaGCTCTGCCCGGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: ETQPQLSISTLLAEARRAHSTAA*LCPGLL
Trigger: CAGAAGGCCCGGGCAGAGCCACGCAGCGGTGCTATG...TGCTCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000441236.3
CDS-3UTR CCA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCATTTCAGCGACAAGCTaGGGCCAGGCCTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SQKSRDPEILESETDRTGISATS*GQASGA
Trigger: TGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAAT...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AGGACAGGCACTGCCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATTTCAGCGACAAGCTaGGGCCAGGCCTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RTGTAQVCPESEDTGTLLISATS*GQASGA
Trigger: TGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAAT...GAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GAGGGCAGCGCCCCCTCCCCGATCAGCTCTGTGTCAAACAACTCTGTGACCAGGTGTGACCGCCATCATTaGCAAGAGTCCCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: EGSAPSPISSVSNNSVTRCDRHH*QESRAS
Trigger: ACTGGCACGGGACTCTTGTCAATGATGGCGGTCACA...CCTGGTCACAGAGTTGTTTGACACAGAGCTGATCGGGGAGGGGGCGCTGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000562381.7
CDS-3UTR TCA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCCACGAGAGAACCACCTaGGCTCGGCCAGATGTCAGA +
Preference number: 4 (lower is better)
Translates to: SQKSRDPEILESETDRTGHERTT*ARPDVR
Trigger: TCTGACATCTGGCCGAGCTCAGGTGGTTCTCTCGTG...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp AGGACAGGCACTGCCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCCACGAGAGAACCACCTaGGCTCGGCCAGATGTCAGA +
Preference number: 4 (lower is better)
Translates to: RTGTAQVCPESEDTGTLLHERTT*ARPDVR
Trigger: TCTGACATCTGGCCGAGCTCAGGTGGTTCTCTCGTG...GAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGGGGCCATGGTGCACTTaGTCTTCCCCTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKGPWCT*SSPQGP
Trigger: TGGACCCTGAGGGGAAGATCAAGTGCACCATGGCCC...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp CGGCATGGCATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGCATCTCCTCTGGGTCTaGGTGTGCCCAGAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: RHGMSPSGPTVTSVECLLHLLWV*VCPEGG
Trigger: GCCCCCTTCTGGGCACACTCAGACCCAGAGGAGATG...CAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCATGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR TCA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGTGCTCCACCCCCAGGTaGTGGGCCAGCACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGCSTPR*WASTES
Trigger: GCTCTCCGTGCTGGCCCATCACCTGGGGGTGGAGCA...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGGGTGGGTTTCTCAACAGTTTGTaGGAAGCTGCTGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: GSARARRGCGMGTPTAGGFLNSL*EAAELS
Trigger: CGAGAGTTCAGCAGCTTCTCACAAACTGTTGAGAAA...CCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR TCA 90 bp GGAGAGGAGGGCCTTCAGCCTTCCCCGCTAGAAAGCCATGAGCCACTCAGAACCGGAGATCCTCGAGAGTaGGACAGACAGGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: GEEGLQPSPLESHEPLRTGDPRE*DRQDRL
Trigger: GAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCC...GGTTCTGAGTGGCTCATGGCTTTCTAGCGGGGAAGGCTGAAGGCCCTCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCAAGTTACCTGTCAGGTaGAAGGGCCAGAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: GVLHLFQRQAGARPQGHAKLPVR*KGQNPG
Trigger: GCCTGGGTTCTGGCCCTTTCACCTGACAGGTAACTT...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp ACAAGATGCAACACGGCGCAGTCTTTCCCATCCCTGAGGCCGAGCAGCTCCCAGAGGGGCTTTCCAATCTaGGGGAGGTGCAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: TRCNTAQSFPSLRPSSSQRGFPI*GRCREQ
Trigger: CTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCT...CTGGGAGCTGCTCGGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCATGGCAGGCACCCGGCTaGACTGCAGAGCCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQAWQAPG*TAEPGP
Trigger: TGGCCCCGGCTCTGCAGTGCAGCCGGGTGCCTGCCA...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR GCA 90 bp GGTGCGCCAGGGCAGCTCTCCACGTCAACGGGAGGGACGATGACCTGCTCTCCGAGAAGATCTTCATGGTaGCCACTAGCTCCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: GAPGQLSTSTGGTMTCSPRRSSW*PLAPQF
Trigger: AAACTGGGGAGCTAGTGGGCACCATGAAGATCTTCT...CGGAGAGCAGGTCATCGTCCCTCCCGTTGACGTGGAGAGCTGCCCTGGCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR GCA 90 bp AGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTAGAAGATCTTCATGGTaGCCACTAGCTCCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: RARRGCGMGTPTAGGAQLRRSSW*PLAPQF
Trigger: AAACTGGGGAGCTAGTGGGCACCATGAAGATCTTCT...AAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp ACAAGATGCAACACGGCGCAGTCTTTCCCATCCCTGAGGCCGAGCAGCTCCCAGGGACTCCACCAGCTGTaGATAGACGGTGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TRCNTAQSFPSLRPSSSQGLHQL*IDGGSV
Trigger: CACAGAGCCACCGTCTATGCACAGCTGGTGGAGTCC...CTGGGAGCTGCTCGGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GCTGCGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGCTGAGCTACTGACTTaGTTGCTGAAGTCTATGCTG +
Preference number: 4 (lower is better)
Translates to: AAAWVLPQRVGLSFPALPAELLT*LLKSML
Trigger: CAGCATAGACTTCAGCAAGCAAGTCAGTAGCTCAGC...AGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp GTCAAAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCAAGGAAGTACACACACTaGATCCAGTGGTCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: VKGQDLPGLGEAAAWVLPRKYTH*IQWSRH
Trigger: GTGGCGGGACCACTGGATGCAGTGTGTGTACTTCCT...TGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACTCAGGGCTGGTCCTCTaGAGGCTGTACCATACGCAG +
Preference number: 4 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNSGLVL*RLYHTQ
Trigger: CTGCGTATGGTACAGCCTGCAGAGGACCAGCCCTGA...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGCACCTGGCCCCAGGTaGTGGTCCACAGCGGTCCGC +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQAAPGPR*WSTAVR
Trigger: GCGGACCGCTGTGGACCAGCACCTGGGGCCAGGTGC...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCATCGGCACACAGGGGCTaGAGGGGCACCGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQASAHRG*RGTGCW
Trigger: CCAGCAGCCGGTGCCCCTGCAGCCCCTGTGTGCCGA...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AAAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGGGGGTGAAACTCCACTaGATAGCTGACAGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: KGQDLPGLGEAAAWVLPQGVKLH*IADSPW
Trigger: CCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCC...CTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp CAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTTGTCCCTCTCATGCTTCCTaGCACAGCTGGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: QPLSWACISGTALGQLPCPSHAS*HSWSQR
Trigger: CCTCTGGCTCCAGCTGTGGCAGGAAGCATGAGAGGG...ACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGCTGCATCTCAGGAACTaGTCTGGGACAGCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VREARPRHLLTFLVKRRWLHLRN*SGTAAL
Trigger: CAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAG...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGTGCAGGGAACAGGGCTaGCTCCCAGCTCCCCTGACA +
Preference number: 4 (lower is better)
Translates to: ATAGARGQQCKDATRCNTCREQG*LPAPLT
Trigger: TGTCAGGGGAGCTGGGAGGCAGCCCTGTTCCCTGCA...CGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCTGCAGGGAACAGGGCTaGCTCCCAGCTCCCCTGACA +
Preference number: 4 (lower is better)
Translates to: HSWSQRPAVQRCNKMQHGCREQG*LPAPLT
Trigger: TGTCAGGGGAGCTGGGAGGCAGCCCTGTTCCCTGCA...GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AGGACAGGCACTGCCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCCTGCCATACCCCACCTaGAGGAGGGGCTTTCCAATC +
Preference number: 4 (lower is better)
Translates to: RTGTAQVCPESEDTGTLLLPYPT*RRGFPI
Trigger: GATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCAG...GAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGTGGAGGGGAGGGAGTTCCTaGCCCCAACTGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: DDVACVGVKLHCIADSPWRGGSS*PQLQDR
Trigger: CCTGTCCTGCAGTTGGGGGCAGGAACTCCCTCCCCT...CCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGAGGCTCAAGGCTGGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGTCCGCTCGCCTCCGCTaGTACCACTTTTACCGCGGC +
Preference number: 4 (lower is better)
Translates to: VRLKAGVLHLFQRQAGARSARLR*YHFYRG
Trigger: GCCGCGGTAAAAGTGGTAGCAGCGGAGGCGAGCGGA...CCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACCAGCCTTGAGCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GTGTGTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCCTCTGCCGAAACCCTaGTGCCAAGGACACCATGCT +
Preference number: 4 (lower is better)
Translates to: VCERSKATAPTDLPGEAAPLPKP*CQGHHA
Trigger: AGCATGGTGTCCTTGGCACCAGGGTTTCGGCAGAGG...CGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCACACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR CCA 90 bp CCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTTGCAGAAGATCTTCATaGTGCCCACTAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PGPARVFKPQRPSHNSASCRRSS*CPLAPQ
Trigger: CTGGGGAGCTAGTGGGCACCATGAAGATCTTCTGCA...AGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACAGGACCCCGTGGTCGGATTaGCCCGACTGCAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: HTPPAGGAFQSEGGAGNRTPWSD*PDCRRS
Trigger: AGATCTTCTGCAGTCGGGCCAATCCGACCACGGGGT...CCTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCACCCCGTGGTCGGATTaGCCCGACTGCAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: PKSALNPRTPELCSYRRLTPWSD*PDCRRS
Trigger: AGATCTTCTGCAGTCGGGCCAATCCGACCACGGGGT...GAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCGATGTTGGCACGGCATaGCATGTCACCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: PKSALNPRTPELCSYRRLDVGTA*HVTLWT
Trigger: GGTCCAGAGGGTGACATGCCATGCCGTGCCAACATC...GAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCCACGGGTGGTCTGCACGTGGATaGGAAATAGCTTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: RDPEILESETDRTGSRHGWSARG*EIACST
Trigger: CGTGGAACAAGCTATTTCCCATCCACGTGCAGACCA...CCCGTGGCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAGGTGGTCTGCACGTGGATaGGAAATAGCTTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: GYSHSGWGSASLLSLKSRWSARG*EIACST
Trigger: CGTGGAACAAGCTATTTCCCATCCACGTGCAGACCA...CCTGGACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp AGGCTCCAGGAGGCCAGTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATCATTCTTTTCAGGGCTaGTCCTCTGCAGGCTGTACC +
Preference number: 4 (lower is better)
Translates to: RLQEASAERALRGQVVLHHSFQG*SSAGCT
Trigger: GGTACAGCCTGCAGAGGACCAGCCCTGAAAAGAATG...ATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CCA 90 bp AAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCCACACGGGGCGCATCTaGCGGACTCTCTCATTCTTT +
Preference number: 4 (lower is better)
Translates to: KSRDPEILESETDRTGSRHTGRI*RTLSFF
Trigger: AAAGAATGAGAGAGTCCGCCAGATGCGCCCCGTGTG...GCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GGCCTCTCAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACACGATCAGTTCTGTCCTaGTCATTGATCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: GLSARAQPGSSSPRDPATRSVLS*SLISPN
Trigger: GTTTGGAGAGATCAATGACCAGGACAGAACTGATCG...TGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTGAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AGGCTCCAGGAGGCCAGTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATACGGTCCTCAGAGCCTaGACGTATCGATCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RLQEASAERALRGQVVLHTVLRA*TYRSVL
Trigger: CAGAACTGATCGATACGTCCAGGCTCTGAGGACCGT...ATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CCA 90 bp GCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGCATCACCATGGCACCTaGCCCCAGGTGCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: ATAGARGQQCKDATRCNTHHHGT*PQVLVH
Trigger: GTGGACCAGCACCTGGGGCCAGGTGCCATGGTGATG...CGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTCATCACCATGGCACCTaGCCCCAGGTGCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GARGQQCKDATRCNTAQSHHHGT*PQVLVH
Trigger: GTGGACCAGCACCTGGGGCCAGGTGCCATGGTGATG...AGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGATACTCCCACAGCGGGTaGGGCTCAGCTTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PETQPQLSISTLLAEARRYSHSG*GSASLL
Trigger: GAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTA...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCGGAGAGGCTGCGGCATaGGTACTCCCACAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: GQQCKDATRCNTAQSFPSGEAAA*VLPQRV
Trigger: CACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCC...GGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AGGACAGGCACTGCCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCAGGGGCACCGGCTGCTaGAAGTCAAAGGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: RTGTAQVCPESEDTGTLLRGTGC*KSKVRI
Trigger: GATCCTGACCTTTGACTTCCAGCAGCCGGTGCCCCT...GAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AGGACAGGCACTGCCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCCACTCCGGGGTCAGGTaGTACTCCATCCATAGCACC +
Preference number: 4 (lower is better)
Translates to: RTGTAQVCPESEDTGTLLHSGVR*YSIHST
Trigger: GGTGCTATGGATGGAGTACCACCTGACCCCGGAGTG...GAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAGGGCACGCTTAATCATATAGCTGACAGTCCGTaGGCCACCCAGCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: RVGLSFPALPEVQGTLNHIADSP*ATQQCS
Trigger: AGAGCACTGCTGGGTGGCCCACGGACTGTCAGCTAT...ATGATTAAGCGTGCCCTGGACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp CCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCCAAGAGTGGTCAGTCTaGGGTATCTGCATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: PGPSQGLQAPETQPQLSIQEWSV*GICMPE
Trigger: TTCAGGCATGCAGATACCCCAGACTGACCACTCTTG...GATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGCACTCCCTTCCCAGCTaGGGAGAGATGTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VREARPRHLLTFLVKRRWHSLPS*GEMSLC
Trigger: ACACAGAGACATCTCTCCCCAGCTGGGAAGGGAGTG...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTCCAGTCTCAGGTCCTaGCAGGCCACCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GARGQQCKDATRCNTAQSSSLRS*QATSWC
Trigger: GCACCAGCTGGTGGCCTGCCAGGACCTGAGACTGGA...AGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCTCTCAGGAACTGCTCTaGGACAGCTGCCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: KSRDPEILESETDRTGSRSQELL*DSCLVS
Trigger: GGACACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGA...GCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTTGTATTTCAGCGACAAGCTaGGGCCAGGCCTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QPLSWACISGTALGQLPCISATS*GQASGA
Trigger: TGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAAT...ACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AGGCTCCAGGAGGCCAGTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATGAGGGTTCAGGAAAATaGTGCATCGGTGACCACAGG +
Preference number: 4 (lower is better)
Translates to: RLQEASAERALRGQVVLHEGSGK*CIGDHR
Trigger: CCTGTGGTCACCGATGCACCATTTTCCTGAACCCTC...ATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675132.1
3UTR CAA 72 bp TCTCCGAGGCTGGTCTGCACGTGGATGGGAAATAGCTaGTTCCACGACCACATCCTCCCGGACTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SPRLVCTWMGNS*FHDHILPDSTS
Trigger: GCTGGTGGAGTCCGGGAGGATGTGGTCGTGGAACAAGCTATTTCCCATCCACGTGCAGACCAGCCTCGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR TCA 90 bp CCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTAGCAGCCTTGCCAGTTaGGTTCTTGTGGACAAGTCT +
Preference number: 4 (lower is better)
Translates to: PGPARVFKPQRPSHNSASSSLAS*VLVDKS
Trigger: AGACTTGTCCACAAGAACTCAACTGGCAAGGCTGCT...AGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCAGCAGCCTTGCCAGTTaGGTTCTTGTGGACAAGTCT +
Preference number: 4 (lower is better)
Translates to: ERSKATAPTDLPGEAALGSSLAS*VLVDKS
Trigger: AGACTTGTCCACAAGAACTCAACTGGCAAGGCTGCT...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNSRHLL*PPSLTR
Trigger: TCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACT...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCTGTAAAGTCGGCTGGTaGCACCTGGTTCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: ERSKATAPTDLPGEAALGCKVGW*HLVQLN
Trigger: ATTCAGCTGAACCAGGTGTCACCAGCCGACTTTACA...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGTGTAAAGTCGGCTGGTaGCACCTGGTTCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: VLSVHSGVRWYSIHSTAACKVGW*HLVQLN
Trigger: ATTCAGCTGAACCAGGTGTCACCAGCCGACTTTACA...CGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR TCA 90 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCGCTATGGCAGGCTGCTaGGCTACTGACTTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: PKSALNPRTPELCSYRRLAMAGC*ATDLLA
Trigger: AGCAAGCAAGTCAGTAGCTCAGCAGCCTGCCATAGC...GAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCGCTATGGCAGGCTGCTaGGCTACTGACTTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SQKSRDPEILESETDRTGAMAGC*ATDLLA
Trigger: AGCAAGCAAGTCAGTAGCTCAGCAGCCTGCCATAGC...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAGCAGGGCCATGGTGCACTTaGTCTTCCCCTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: ETQPQLSISTLLAEARRAGPWCT*SSPQGP
Trigger: TGGACCCTGAGGGGAAGATCAAGTGCACCATGGCCC...TGCTCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp CATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGCATCTCCTCTGGGTCTaGGTGTGCCCAGAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: HDDVACVGVKLHCIADSPHLLWV*VCPEGG
Trigger: GCCCCCTTCTGGGCACACTCAGACCCAGAGGAGATG...CGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR TCA 90 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTACCAGATAGAGCGCTaGGCCCTGCACCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: GARGQQCKDATRCNTAQSYQIER*ALHHRL
Trigger: GAGCCTGTGGTGCAGGGCTCAGCGCTCTATCTGGTA...AGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCTTCTGTCCTGGTCATTaGTCTCTCCAAACCGAGGCC +
Preference number: 4 (lower is better)
Translates to: GVLHLFQRQAGARPQGHAFCPGH*SLQTEA
Trigger: GGCCTCGGTTTGGAGAGATCAATGACCAGGACAGAA...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTGATCTGGGGCAGGGCTaGAGAAGTAGACGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GARGQQCKDATRCNTAQSDLGQG*RSRRPA
Trigger: AGCAGGCCGTCTACTTCTTCAGCCCTGCCCCAGATC...AGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAACTCCACTGCATAGCTaGCAGTCCGTGGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: PETQPQLSISTLLAEARRTPLHS*QSVGHP
Trigger: TGGGTGGCCCACGGACTGTCAGCTATGCAGTGGAGT...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGAGAGGAGGGCCTTCAGCCTTCCCCGCTAGAAAGCCATGAGCCACTCAGAACCAAGTTACCTGTCAGGTaGAAGGGCCAGAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: GEEGLQPSPLESHEPLRTKLPVR*KGQNPG
Trigger: GCCTGGGTTCTGGCCCTTTCACCTGACAGGTAACTT...GGTTCTGAGTGGCTCATGGCTTTCTAGCGGGGAAGGCTGAAGGCCCTCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTCACGCTAGGCTCCTCTaGCGAAACCCTGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: GARGQQCKDATRCNTAQSHARLL*RNPGAK
Trigger: CTTGGCACCAGGGTTTCGGCAGAGGAGCCTAGCGTG...AGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR GCA 90 bp AGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTACAGAAAAGCAGCCTTaGCAGTTGAGTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RARRGCGMGTPTAGGAQLTEKQP*QLSSCG
Trigger: TCCACAAGAACTCAACTGGCAAGGCTGCTTTTCTGT...AAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp TGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACAGTCACCTCTGTCCTTCACCCTaGTCACGGCAGCCCGGATAC +
Preference number: 4 (lower is better)
Translates to: CDQDVGTAWHVTLWTYSHLCPSP*SRQPGY
Trigger: GTATCCGGGCTGCCGTGAGCAGGGTGAAGGACAGAG...GTGACTGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR GCA 90 bp GGAGAGGAGGGCCTTCAGCCTTCCCCGCTAGAAAGCCATGAGCCACTCAGAACCAGAGTCCCGTGCCAGTaGCAATGTCGAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: GEEGLQPSPLESHEPLRTRVPCQ*QCREPR
Trigger: CCTTGGTTCTCGACATTGGCACTGGCACGGGACTCT...GGTTCTGAGTGGCTCATGGCTTTCTAGCGGGGAAGGCTGAAGGCCCTCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCTTGACAAGAGTCCCGTaGCAGTGCCAATGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: ERSKATAPTDLPGEAALGLTRVP*QCQCRE
Trigger: TTCTCGACATTGGCACTGGCACGGGACTCTTGTCAA...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCTCCGAGGCTGGTCTaGACGTGGATGGGAAATAGC +
Preference number: 4 (lower is better)
Translates to: SQKSRDPEILESETDRTGSPRLV*TWMGNS
Trigger: GCTATTTCCCATCCACGTGCAGACCAGCCTCGGAGA...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACTCTCCGAGGCTGGTCTaGACGTGGATGGGAAATAGC +
Preference number: 4 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNSPRLV*TWMGNS
Trigger: GCTATTTCCCATCCACGTGCAGACCAGCCTCGGAGA...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGGTCACAGACAGAGGGTaGGCCAGGGCAGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: VKQLCDQDVGTAWHVTLWVTDRG*ARAALH
Trigger: GTGGAGAGCTGCCCTGGCGCACCCTCTGTCTGTGAC...CCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR GCA 90 bp CACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCCAGTGGTCCCGCCACTaGATCTCCTCTGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: HSWSQRPAVQRCNKMQHGQWSRH*ISSGSE
Trigger: CTCAGACCCAGAGGAGATGCAGTGGCGGGACCACTG...GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACAGGAGGAAGTACACACACTaGATCCAGTGGTCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: HTPPAGGAFQSEGGAGNRRKYTH*IQWSRH
Trigger: GTGGCGGGACCACTGGATGCAGTGTGTGTACTTCCT...CCTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTAGCGTGCAGCGAGGCTaGCTGGGGCATCACCATGGC +
Preference number: 4 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCSVQRG*LGHHHG
Trigger: GCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCT...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATAGCGTGCAGCGAGGCTaGCTGGGGCATCACCATGGC +
Preference number: 4 (lower is better)
Translates to: EASSAKMQQDATRRSLSHSVQRG*LGHHHG
Trigger: GCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCT...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCATGTCGTCCATGATGTaGACGTCGAAGCCTTCGCAG +
Preference number: 4 (lower is better)
Translates to: KSRDPEILESETDRTGSRMSSMM*TSKPSQ
Trigger: CTGCGAAGGCTTCGACGTGCACATCATGGACGACAT...GCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGTCAAAGGTCAGGATCTaGCAGGGCTCGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKSKVRI*QGSERL
Trigger: CAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTTGA...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AGGACAGGCACTGCCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCGGGGTGAAACTCCACTaGATAGCTGACAGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: RTGTAQVCPESEDTGTLLGVKLH*IADSPW
Trigger: CCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCC...GAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCCACGGGTCAGTCTGGGGTATCTaGATGCCTGAACTCCATGAT +
Preference number: 4 (lower is better)
Translates to: RDPEILESETDRTGSRHGSVWGI*MPELHD
Trigger: ATCATGGAGTTCAGGCATGCAGATACCCCAGACTGA...CCCGTGGCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCAGTCACCCTCTCATaGTTCCTGCCACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SQKSRDPEILESETDRTGSVTLS*FLPQLE
Trigger: CTCCAGCTGTGGCAGGAAGCATGAGAGGGTGACTGA...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGCTGCTCTGGGACAGCTaGCTTGTGTCCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKLLWDS*LVSSLR
Trigger: CCTGAGACTGGACACAAGGCAGCTGTCCCAGAGCAG...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGGCACTGCCCAAGTCTaGCCTGAATCCGAGGACACC +
Preference number: 4 (lower is better)
Translates to: HSWSQRPAVQRCNKMQHGGTAQV*PESEDT
Trigger: GGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCC...GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCAGTTGAGTTCTTGTaGACAAGTCTGACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: RARRGCGMGTPTAGGAQLPVEFL*TSLTVR
Trigger: TCTGACAGTCAGACTTGTCCACAAGAACTCAACTGG...AAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp CACGTCAACGGGAGGGACGATGACCTGCTCTCCGAGGCTGGTCTGCACGTGGATTGCAGAAGATCTTCATaGTGCCCACTAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: HVNGRDDDLLSEAGLHVDCRRSS*CPLAPQ
Trigger: CTGGGGAGCTAGTGGGCACCATGAAGATCTTCTGCA...ATCCACGTGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTTGACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR CCA 90 bp TCTGGGTCTGAGTGTGCCCAGAAGGGGGCCATGGTGCACTTGATCTTCCCCTCAACCCCGTGGTCGGATTaGCCCGACTGCAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: SGSECAQKGAMVHLIFPSTPWSD*PDCRRS
Trigger: AGATCTTCTGCAGTCGGGCCAATCCGACCACGGGGT...TGAGGGGAAGATCAAGTGCACCATGGCCCCCTTCTGGGCACACTCAGACCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR CCA 90 bp GGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCACTCCACAGACCCCGTaGTCGGATTGGCCCGACTGC +
Preference number: 4 (lower is better)
Translates to: GQQCKDATRCNTAQSFPSTPQTP*SDWPDC
Trigger: GCAGTCGGGCCAATCCGACCACGGGGTCTGTGGAGT...GGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCACTCCACAGACCCCGTaGTCGGATTGGCCCGACTGC +
Preference number: 4 (lower is better)
Translates to: KQLCDQDVGTAWHVTLWTTPQTP*SDWPDC
Trigger: GCAGTCGGGCCAATCCGACCACGGGGTCTGTGGAGT...GGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CCA 90 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCTGGCATGTCACCCTCTaGACCTACAGTCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: PKSALNPRTPELCSYRRLWHVTL*TYSHLG
Trigger: ACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCA...GAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCGCTGTGCATAGACGGTaGCTCTGTGGGGCACGGCCT +
Preference number: 4 (lower is better)
Translates to: KQLCDQDVGTAWHVTLWTAVHRR*LCGARP
Trigger: AGGCCGTGCCCCACAGAGCCACCGTCTATGCACAGC...GGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR CCA 90 bp CATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACAGGTCAAACCGCCTGCTATaGCAGGCTGCTGAGCTACTG +
Preference number: 4 (lower is better)
Translates to: HTPPAGGAFQSEGGAGNRSNRLL*QAAELL
Trigger: CAGTAGCTCAGCAGCCTGCCATAGCAGGCGGTTTGA...CCTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGCATTCTTTTCAGGGCTaGTCCTCTGCAGGCTGTACC +
Preference number: 4 (lower is better)
Translates to: VREARPRHLLTFLVKRRWHSFQG*SSAGCT
Trigger: GGTACAGCCTGCAGAGGACCAGCCCTGAAAAGAATG...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GCTTCCCTGCTCTCCCTGAAGTCCAGGGCACGCTTAATCATGTCGTCCATGATGCATCACCATGGCACCTaGCCCCAGGTGCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: ASLLSLKSRARLIMSSMMHHHGT*PQVLVH
Trigger: GTGGACCAGCACCTGGGGCCAGGTGCCATGGTGATG...CATCATGGACGACATGATTAAGCGTGCCCTGGACTTCAGGGAGAGCAGGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp GCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAAGAGTGGTCAGTCTaGGGTATCTGCATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: AWVLPQRVGLSFPALPEVQEWSV*GICMPE
Trigger: TTCAGGCATGCAGATACCCCAGACTGACCACTCTTG...GACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp CTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAGGGCACGTTTATTGCTCAAGAGTaGTCAGTCTGGGGTATCTGC +
Preference number: 4 (lower is better)
Translates to: LPQRVGLSFPALPEVQGTFIAQE*SVWGIC
Trigger: GCAGATACCCCAGACTGACCACTCTTGAGCAATAAA...CGTGCCCTGGACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp CAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCAGACACCTATGGATGTaGCTTGAAGTTACCTGTCAG +
Preference number: 4 (lower is better)
Translates to: QPGPSQGLQAPETQPQLSRHLWM*LEVTCQ
Trigger: CTGACAGGTAACTTCAAGCCACATCCATAGGTGTCT...GCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCACTCGGTAGGCCGAGGTaGGGATCGCTTGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQALGRPR*GSLEPR
Trigger: CCTGGGCTCAAGCGATCCTCACCTCGGCCTACCGAG...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCAGCAGCCTTGCCAGTTaGGTTCTTGTGGACAAGTCT +
Preference number: 4 (lower is better)
Translates to: ARVFKPQRPSHNSASPPSSSLAS*VLVDKS
Trigger: AGACTTGTCCACAAGAACTCAACTGGCAAGGCTGCT...GGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp CGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGCATATCTGCATAAGATaGCCTTGCAATCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RHGYSHSGWGSASLLSLKHICIR*PCNLLV
Trigger: CACCAGGAGATTGCAAGGTCATCTTATGCAGATATG...CTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR TCA 90 bp CAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTTGTTGTGACCGCCATCATTaGCAAGAGTCCCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: QPLSWACISGTALGQLPCCDRHH*QESRAS
Trigger: ACTGGCACGGGACTCTTGTCAATGATGGCGGTCACA...ACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCACAACGGGAGGGACGATaGCCTGCTCTCCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQAQREGR*PALRGW
Trigger: CCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTTG...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCTGTAAAGTCGGCTGGTaGCACCTGGTTCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GVLHLFQRQAGARPQGHACKVGW*HLVQLN
Trigger: ATTCAGCTGAACCAGGTGTCACCAGCCGACTTTACA...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GCTGTGACCGCCATCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCCACGAGAGAACCACCTaGGCTCGGCCAGATGTCAGA +
Preference number: 4 (lower is better)
Translates to: AVTAIIDKSPVPVPMSRTHERTT*ARPDVR
Trigger: TCTGACATCTGGCCGAGCTCAGGTGGTTCTCTCGTG...GGTTCTCGACATTGGCACTGGCACGGGACTCTTGTCAATGATGGCGGTCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR TCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTGCAGGCTGCCATCGCTaGCACACAGGCACACGCTGT +
Preference number: 4 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCAGCHR*HTGTRC
Trigger: ACAGCGTGTGCCTGTGTGTCAGCGATGGCAGCCTGC...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATGCAGGCTGCCATCGCTaGCACACAGGCACACGCTGT +
Preference number: 4 (lower is better)
Translates to: EASSAKMQQDATRRSLSHAGCHR*HTGTRC
Trigger: ACAGCGTGTGCCTGTGTGTCAGCGATGGCAGCCTGC...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCGATCTGGGGCAGGGCTaGAGAAGTAGACGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GQQCKDATRCNTAQSFPSDLGQG*RSRRPA
Trigger: AGCAGGCCGTCTACTTCTTCAGCCCTGCCCCAGATC...GGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp CATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGACTCCACTGCATAGCTaGCAGTCCGTGGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: HDDVACVGVKLHCIADSPTPLHS*QSVGHP
Trigger: TGGGTGGCCCACGGACTGTCAGCTATGCAGTGGAGT...CGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR TCA 90 bp CACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGGAGATCCTCGAGAGTaGGACAGACAGGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: HSWSQRPAVQRCNKMQHGGDPRE*DRQDRL
Trigger: GAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCC...GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GCTCATAGGAGGGCAGCGCCCCCTCCCCGATCAGCTCTGTGTCAAACAACTCTGTCTTGTGGACAAGTCTaGCTGTCAGAAATCCGCCGC +
Preference number: 4 (lower is better)
Translates to: AHRRAAPPPRSALCQTTLSCGQV*LSEIRR
Trigger: GCGGCGGATTTCTGACAGTCAGACTTGTCCACAAGA...CAGAGTTGTTTGACACAGAGCTGATCGGGGAGGGGGCGCTGCCCTCCTATGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000562381.7
CDS-3UTR TCA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGAAAATGGTGCATCGGTaGCCACAGGAAGTAAGCTCC +
Preference number: 4 (lower is better)
Translates to: VREARPRHLLTFLVKRRWKMVHR*PQEVSS
Trigger: GGAGCTTACTTCCTGTGGTCACCGATGCACCATTTT...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCCTTCAGCCTTCCCCGCTAGAAAGCCATGAGCCACTCAGAACCTCGGATTGGCCCGACTaGAGAAGATCTTCATGGTGC +
Preference number: 4 (lower is better)
Translates to: GEEGLQPSPLESHEPLRTSDWPD*RRSSWC
Trigger: GCACCATGAAGATCTTCTGCAGTCGGGCCAATCCGA...GGTTCTGAGTGGCTCATGGCTTTCTAGCGGGGAAGGCTGAAGGCCCTCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACTCGGATTGGCCCGACTaGAGAAGATCTTCATGGTGC +
Preference number: 4 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNSDWPD*RRSSWC
Trigger: GCACCATGAAGATCTTCTGCAGTCGGGCCAATCCGA...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGCTCTGTCCTTCACCCTaGTCACGGCAGCCCGGATAC +
Preference number: 4 (lower is better)
Translates to: HDDVACVGVKLHCIADSPLCPSP*SRQPGY
Trigger: GTATCCGGGCTGCCGTGAGCAGGGTGAAGGACAGAG...CGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGAGGCTCAAGGCTGGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCACGAGATGCCTGTGTaGGTGCTCATAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VRLKAGVLHLFQRQAGARHEMPV*VLIGGQ
Trigger: CTGCCCTCCTATGAGCACGCACACAGGCATCTCGTG...CCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACCAGCCTTGAGCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CCGCCATCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCAAGGCCTGGACTCCACCAGCTGTaGATAGACGGTGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PPSLTRVPCQCQCREPRPGLHQL*IDGGSV
Trigger: CACAGAGCCACCGTCTATGCACAGCTGGTGGAGTCC...AGGCCTTGGTTCTCGACATTGGCACTGGCACGGGACTCTTGTCAATGATGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR GCA 90 bp GATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGTGGGGACTCCACCAGCTGTaGATAGACGGTGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: DDVACVGVKLHCIADSPWGLHQL*IDGGSV
Trigger: CACAGAGCCACCGTCTATGCACAGCTGGTGGAGTCC...CCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGAGGCTCAAGGCTGGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGTCAGGGCTGGTCCTCTaGAGGCTGTACCATACGCAG +
Preference number: 4 (lower is better)
Translates to: VRLKAGVLHLFQRQAGARSGLVL*RLYHTQ
Trigger: CTGCGTATGGTACAGCCTGCAGAGGACCAGCCCTGA...CCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACCAGCCTTGAGCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCGGAGAGAGACCTTTCTaGCCTGTAGGTCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: ARVFKPQRPSHNSASPPSGERPF*PVGPHL
Trigger: CAAATGAGGACCTACAGGGCAGAAAGGTCTCTCTCC...GGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTCAAAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCAGGAGAGAGACCTTTCTaGCCTGTAGGTCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: VKGQDLPGLGEAAAWVLPGERPF*PVGPHL
Trigger: CAAATGAGGACCTACAGGGCAGAAAGGTCTCTCTCC...TGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp GGAGAGGAGGGCCTTCAGCCTTCCCCGCTAGAAAGCCATGAGCCACTCAGAACCATGTCGTCCATGATGTaGACGTCGAAGCCTTCGCAG +
Preference number: 4 (lower is better)
Translates to: GEEGLQPSPLESHEPLRTMSSMM*TSKPSQ
Trigger: CTGCGAAGGCTTCGACGTGCACATCATGGACGACAT...GGTTCTGAGTGGCTCATGGCTTTCTAGCGGGGAAGGCTGAAGGCCCTCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCATGTCGTCCATGATGTaGACGTCGAAGCCTTCGCAG +
Preference number: 4 (lower is better)
Translates to: PKSALNPRTPELCSYRRLMSSMM*TSKPSQ
Trigger: CTGCGAAGGCTTCGACGTGCACATCATGGACGACAT...GAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTAGGGCTCGGAGAGGCTaGGGCATGGGTACTCCCACA +
Preference number: 4 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCRARRG*GMGTPT
Trigger: TGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCT...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGAGGCTCAAGGCTGGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGTCAAAGGTCAGGATCTaGCAGGGCTCGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VRLKAGVLHLFQRQAGARSKVRI*QGSERL
Trigger: CAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTTGA...CCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACCAGCCTTGAGCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCTGCAGGGGCACCGGCTaGTGGAAGTCAAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GQQCKDATRCNTAQSFPSCRGTG*WKSKVR
Trigger: CCTGACCTTTGACTTCCAGCAGCCGGTGCCCCTGCA...GGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCCACGGGAAAGATGCAACAAGATaGAACACGGCGCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: RDPEILESETDRTGSRHGKDATR*NTAQSF
Trigger: GAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTT...CCCGTGGCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCCCAGCAGTGCAAAGATaGAACAAGATGCAACACGGC +
Preference number: 4 (lower is better)
Translates to: ARVFKPQRPSHNSASPPSPAVQR*NKMQHG
Trigger: GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGG...GGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACGCCAGAGGCCAGCAGTaGAAAGATGCAACAAGATGC +
Preference number: 4 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNARGQQ*KDATRC
Trigger: GCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGC...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTCAGGCCACCAGCTGGTaGAGCACTGAGGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCQATSW*STEARH
Trigger: GTGTCTGGCCTCAGTGCTGCACCAGCTGGTGGCCTG...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAGCACTGCTCTGGGACAGCTaGCTTGTGTCCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: ETQPQLSISTLLAEARRALLWDS*LVSSLR
Trigger: CCTGAGACTGGACACAAGGCAGCTGTCCCAGAGCAG...TGCTCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTTGTCCACTTTCCTGGGCCTaGATCTCAGGAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QPLSWACISGTALGQLPCPLSWA*ISGTAL
Trigger: CAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGG...ACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGCTGCCATACCCCACCTaGAGGAGGGGCTTTCCAATC +
Preference number: 4 (lower is better)
Translates to: ATAGARGQQCKDATRCNTLPYPT*RRGFPI
Trigger: GATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCAG...CGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGGGCACTGCCCAAGTCTaGCCTGAATCCGAGGACACC +
Preference number: 4 (lower is better)
Translates to: HDDVACVGVKLHCIADSPGTAQV*PESEDT
Trigger: GGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCC...CGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR GCA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATAGGGGAGGGAGTTCCTaGCCCCAACTGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: EASSAKMQQDATRRSLSHRGGSS*PQLQDR
Trigger: CCTGTCCTGCAGTTGGGGGCAGGAACTCCCTCCCCT...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp TGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAGAAGTGCCACCAATACTaGCTTCGTATGCTGAACCCT +
Preference number: 4 (lower is better)
Translates to: WVLPQRVGLSFPALPEVQKCHQY*LRMLNP
Trigger: AGGGTTCAGCATACGAAGGCAGTATTGGTGGCACTT...CTGGACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CCA 90 bp ACAAGATGCAACACGGCGCAGTCTTTCCCATCCCTGAGGCCGAGCAGCTCCCAGTGCAGAAGATCTTCATaGTGCCCACTAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: TRCNTAQSFPSLRPSSSQCRRSS*CPLAPQ
Trigger: CTGGGGAGCTAGTGGGCACCATGAAGATCTTCTGCA...CTGGGAGCTGCTCGGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp TGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACAGTCACACCCCGTGGTCGGATTaGCCCGACTGCAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: CDQDVGTAWHVTLWTYSHTPWSD*PDCRRS
Trigger: AGATCTTCTGCAGTCGGGCCAATCCGACCACGGGGT...GTGACTGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CCA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGACTCCACAGACCCCGTaGTCGGATTGGCCCGACTGC +
Preference number: 4 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGTPQTP*SDWPDC
Trigger: GCAGTCGGGCCAATCCGACCACGGGGTCTGTGGAGT...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACAGTCACCTGGCATGTCACCCTCTaGACCTACAGTCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: VTRMLARHGMSPSGPTVTWHVTL*TYSHLG
Trigger: ACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCA...GGTGACTGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CCA 90 bp CCCGTGCCAGTGCCAATGTCGAGAACCAAGGCCTTCTGTCCTCTGTCCTTCACCTGGCATGTCACCCTCTaGACCTACAGTCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: PVPVPMSRTKAFCPLSFTWHVTL*TYSHLG
Trigger: ACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCA...GGTGAAGGACAGAGGACAGAAGGCCTTGGTTCTCGACATTGGCACTGGCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
CDS-3UTR CCA 90 bp GTGAGGCTCAAGGCTGGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGGATGTTGGCACGGCATaGCATGTCACCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: VRLKAGVLHLFQRQAGARDVGTA*HVTLWT
Trigger: GGTCCAGAGGGTGACATGCCATGCCGTGCCAACATC...CCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACCAGCCTTGAGCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CACGTCAACGGGAGGGACGATGACCTGCTCTCCGAGGCTGGTCTGCACGTGGATAGGCTGGTCTGCACGTaGATGGGAAATAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: HVNGRDDDLLSEAGLHVDRLVCT*MGNSLF
Trigger: GAACAAGCTATTTCCCATCCACGTGCAGACCAGCCT...ATCCACGTGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTTGACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR CCA 90 bp CCCGTGCCAGTGCCAATGTCGAGAACCAAGGCCTTCTGTCCTCTGTCCTTCACCTCAAACCGCCTGCTATaGCAGGCTGCTGAGCTACTG +
Preference number: 4 (lower is better)
Translates to: PVPVPMSRTKAFCPLSFTSNRLL*QAAELL
Trigger: CAGTAGCTCAGCAGCCTGCCATAGCAGGCGGTTTGA...GGTGAAGGACAGAGGACAGAAGGCCTTGGTTCTCGACATTGGCACTGGCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR CCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGTCAAACCGCCTGCTATaGCAGGCTGCTGAGCTACTG +
Preference number: 4 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKSNRLL*QAAELL
Trigger: CAGTAGCTCAGCAGCCTGCCATAGCAGGCGGTTTGA...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCCACGGGCGATCAGTTCTGTCCTaGTCATTGATCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: RDPEILESETDRTGSRHGRSVLS*SLISPN
Trigger: GTTTGGAGAGATCAATGACCAGGACAGAACTGATCG...CCCGTGGCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGTACTCCCACAGCGGGTaGGGCTCAGCTTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGYSHSG*GSASLL
Trigger: GAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTA...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGAGAGGCTGCGGCATaGGTACTCCCACAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQAGEAAA*VLPQRV
Trigger: CACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCC...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGAGGGGCACCGGCTGCTaGAAGTCAAAGGTCAGGATC +
Preference number: 4 (lower is better)
Translates to: ATAGARGQQCKDATRCNTRGTGC*KSKVRI
Trigger: GATCCTGACCTTTGACTTCCAGCAGCCGGTGCCCCT...CGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAATAGCTGACAGTCCGTaGGCCACCCAGCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PETQPQLSISTLLAEARRIADSP*ATQQCS
Trigger: AGAGCACTGCTGGGTGGCCCACGGACTGTCAGCTAT...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAGCAATAGCTGACAGTCCGTaGGCCACCCAGCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ETQPQLSISTLLAEARRAIADSP*ATQQCS
Trigger: AGAGCACTGCTGGGTGGCCCACGGACTGTCAGCTAT...TGCTCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGTGGATAGCTGACAGTCCGTaGGCCACCCAGCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: DDVACVGVKLHCIADSPWIADSP*ATQQCS
Trigger: AGAGCACTGCTGGGTGGCCCACGGACTGTCAGCTAT...CCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CCA 90 bp GCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGTGGCTCTGAGATGTCTCTGTGTTaGAGCATTCTCAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: ACTPGSGGTPSIAPLRGSEMSLC*SILSTS
Trigger: TGAGGTGCTGAGAATGCTCCAACACAGAGACATCTC...AGAGCCACGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR CCA 90 bp GCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCGAGGCCAGACACCTATaGATGTGGCTTGAAGTTACC +
Preference number: 4 (lower is better)
Translates to: ARVFKPQRPSHNSASPPSEARHL*MWLEVT
Trigger: GGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTC...GGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATTGGCAGGCCACCAGCTaGTGCAGCACTGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: EASSAKMQQDATRRSLSHWQATS*CSTEAR
Trigger: TCTGGCCTCAGTGCTGCACCAGCTGGTGGCCTGCCA...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
3UTR CAA 72 bp GGGTCTGAGTGTGCCCAGAAGGGGGCCATGGTGCACTaGATCTTCCCCTCAGGGTCCATTTCAATGTCCCAC +
Preference number: 4 (lower is better)
Translates to: GSECAQKGAMVH*IFPSGSISMSH
Trigger: GTGGGACATTGAAATGGACCCTGAGGGGAAGATCAAGTGCACCATGGCCCCCTTCTGGGCACACTCAGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR TCA 90 bp CCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTCATATCTGCATAAGATaGCCTTGCAATCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PGPARVFKPQRPSHNSASHICIR*PCNLLV
Trigger: CACCAGGAGATTGCAAGGTCATCTTATGCAGATATG...AGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GTGAGGCTCAAGGCTGGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGTGTGACCGCCATCATTaGCAAGAGTCCCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: VRLKAGVLHLFQRQAGARCDRHH*QESRAS
Trigger: ACTGGCACGGGACTCTTGTCAATGATGGCGGTCACA...CCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACCAGCCTTGAGCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAGCAAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: ETQPQLSISTLLAEARRASRHLL*PPSLTR
Trigger: TCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACT...TGCTCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp TCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACAGTCAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: SVTRMLARHGMSPSGPTVSRHLL*PPSLTR
Trigger: TCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACT...GACTGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR TCA 90 bp TCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACAGTCGCTATGGCAGGCTGCTaGGCTACTGACTTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SVTRMLARHGMSPSGPTVAMAGC*ATDLLA
Trigger: AGCAAGCAAGTCAGTAGCTCAGCAGCCTGCCATAGC...GACTGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR TCA 90 bp CACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCTATGGCAGGCTGCTaGGCTACTGACTTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: HSWSQRPAVQRCNKMQHGAMAGC*ATDLLA
Trigger: AGCAAGCAAGTCAGTAGCTCAGCAGCCTGCCATAGC...GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp CATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGCACGAGAGAACCACCTaGGCTCGGCCAGATGTCAGA +
Preference number: 4 (lower is better)
Translates to: HDDVACVGVKLHCIADSPHERTT*ARPDVR
Trigger: TCTGACATCTGGCCGAGCTCAGGTGGTTCTCTCGTG...CGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR TCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTGGGCCATGGTGCACTTaGTCTTCCCCTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCGPWCT*SSPQGP
Trigger: TGGACCCTGAGGGGAAGATCAAGTGCACCATGGCCC...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCTTTGTGAGAAGCTGCTaGACTCTCGACTGTAAACAC +
Preference number: 4 (lower is better)
Translates to: AWVLPQRVGLSFPALPEVFVRSC*TLDCKH
Trigger: GTGTTTACAGTCGAGAGTTCAGCAGCTTCTCACAAA...GACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR TCA 90 bp AGGCTCCAGGAGGCCAGTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATTTTGTGAGAAGCTGCTaGACTCTCGACTGTAAACAC +
Preference number: 4 (lower is better)
Translates to: RLQEASAERALRGQVVLHFVRSC*TLDCKH
Trigger: GTGTTTACAGTCGAGAGTTCAGCAGCTTCTCACAAA...ATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR TCA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGGATCTGGGGCAGGGCTaGAGAAGTAGACGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGDLGQG*RSRRPA
Trigger: AGCAGGCCGTCTACTTCTTCAGCCCTGCCCCAGATC...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGACTCCACTGCATAGCTaGCAGTCCGTGGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGTPLHS*QSVGHP
Trigger: TGGGTGGCCCACGGACTGTCAGCTATGCAGTGGAGT...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACGTCTGCTGTTACCTCTaGGAGCTGGGACATAACCAA +
Preference number: 4 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNVCCYL*ELGHNQ
Trigger: TTGGTTATGTCCCAGCTCTCAGAGGTAACAGCAGAC...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGAGAGGAGGGCCTTCAGCCTTCCCCGCTAGAAAGCCATGAGCCACTCAGAACCGTCTGCTGTTACCTCTaGGAGCTGGGACATAACCAA +
Preference number: 4 (lower is better)
Translates to: GEEGLQPSPLESHEPLRTVCCYL*ELGHNQ
Trigger: TTGGTTATGTCCCAGCTCTCAGAGGTAACAGCAGAC...GGTTCTGAGTGGCTCATGGCTTTCTAGCGGGGAAGGCTGAAGGCCCTCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGGAGAAAATAAAACTGTaGGGCTCAAGGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: VLSVHSGVRWYSIHSTAAEKIKL*GSRLVF
Trigger: GAACACCAGCCTTGAGCCTCACAGTTTTATTTTCTC...CGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR TCA 90 bp AAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCACTGCCTTCGTATGCTaGACCCTTAGCTTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KVRICQGSERLRHGYSHSTAFVC*TLSLRK
Trigger: TTTCCTTAAGCTAAGGGTTCAGCATACGAAGGCAGT...GCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp GCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCAGAAGATCTTCATGGTaGCCACTAGCTCCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: ARVFKPQRPSHNSASPPSRRSSW*PLAPQF
Trigger: AAACTGGGGAGCTAGTGGGCACCATGAAGATCTTCT...GGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CCCGTGCCAGTGCCAATGTCGAGAACCAAGGCCTTCTGTCCTCTGTCCTTCACCTCGGATTGGCCCGACTaGAGAAGATCTTCATGGTGC +
Preference number: 4 (lower is better)
Translates to: PVPVPMSRTKAFCPLSFTSDWPD*RRSSWC
Trigger: GCACCATGAAGATCTTCTGCAGTCGGGCCAATCCGA...GGTGAAGGACAGAGGACAGAAGGCCTTGGTTCTCGACATTGGCACTGGCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
CDS-3UTR GCA 90 bp CGGCATGGCATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGAGAGTCCCGTGCCAGTaGCAATGTCGAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: RHGMSPSGPTVTSVECLLRVPCQ*QCREPR
Trigger: CCTTGGTTCTCGACATTGGCACTGGCACGGGACTCT...CAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCATGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR GCA 90 bp GATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGTGGAGAGTCCCGTGCCAGTaGCAATGTCGAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: DDVACVGVKLHCIADSPWRVPCQ*QCREPR
Trigger: CCTTGGTTCTCGACATTGGCACTGGCACGGGACTCT...CCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp GCTCATAGGAGGGCAGCGCCCCCTCCCCGATCAGCTCTGTGTCAAACAACTCTGTTGACAAGAGTCCCGTaGCAGTGCCAATGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: AHRRAAPPPRSALCQTTLLTRVP*QCQCRE
Trigger: TTCTCGACATTGGCACTGGCACGGGACTCTTGTCAA...CAGAGTTGTTTGACACAGAGCTGATCGGGGAGGGGGCGCTGCCCTCCTATGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000562381.7
CDS-3UTR GCA 90 bp GTGTGTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGTTGACAAGAGTCCCGTaGCAGTGCCAATGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: VCERSKATAPTDLPGEAALTRVP*QCQCRE
Trigger: TTCTCGACATTGGCACTGGCACGGGACTCTTGTCAA...CGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCGTCACCTCGGTGGAATaGTTGTTGATAACCTTAATC +
Preference number: 4 (lower is better)
Translates to: PGPSQGLQAPETQPQLSIVTSVE*LLITLI
Trigger: GATTAAGGTTATCAACAAGCATTCCACCGAGGTGAC...GATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAGGGTCACCTCGGTGGAATaGTTGTTGATAACCTTAATC +
Preference number: 4 (lower is better)
Translates to: GYSHSGWGSASLLSLKSRVTSVE*LLITLI
Trigger: GATTAAGGTTATCAACAAGCATTCCACCGAGGTGAC...CCTGGACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCAGTGGTCCCGCCACTaGATCTCCTCTGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: EASSAKMQQDATRRSLSHQWSRH*ISSGSE
Trigger: CTCAGACCCAGAGGAGATGCAGTGGCGGGACCACTG...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CAGCCCTCAGGCCACTTTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCAGTGGTCCCGCCACTaGATCTCCTCTGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QPSGHFIAQEWSVWGICMQWSRH*ISSGSE
Trigger: CTCAGACCCAGAGGAGATGCAGTGGCGGGACCACTG...CATGCAGATACCCCAGACTGACCACTCTTGAGCAATAAAGTGGCCTGAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp CACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCAGGAAGTACACACACTaGATCCAGTGGTCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: HSWSQRPAVQRCNKMQHGRKYTH*IQWSRH
Trigger: GTGGCGGGACCACTGGATGCAGTGTGTGTACTTCCT...GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCTCAAAGGTCAGGATCTaGCAGGGCTCGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GQQCKDATRCNTAQSFPSSKVRI*QGSERL
Trigger: CAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTTGA...GGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATAGTAGACGGCCTGCTTaGAGTGGGGGTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EASSAKMQQDATRRSLSHSRRPA*SGGSSS
Trigger: GCTGCTGGAACCCCCACTGCAAGCAGGCCGTCTACT...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTCAAAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCATCAGTCTGGGGTATCTaGATGCCTGAACTCCATGAT +
Preference number: 4 (lower is better)
Translates to: VKGQDLPGLGEAAAWVLPSVWGI*MPELHD
Trigger: ATCATGGAGTTCAGGCATGCAGATACCCCAGACTGA...TGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGGCCAGAGGCCAGCAGTaGAAAGATGCAACAAGATGC +
Preference number: 4 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKARGQQ*KDATRC
Trigger: GCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGC...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGCCACTTTCCTGGGCCTaGATCTCAGGAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ATAGARGQQCKDATRCNTPLSWA*ISGTAL
Trigger: CAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGG...CGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGAGGACACCGGAACTCTaGTCATACAGGCGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGRTPEL*SYRRLG
Trigger: GCCGAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCT...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CAGCCCTCAGGCCACTTTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGAGGACACCGGAACTCTaGTCATACAGGCGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: QPSGHFIAQEWSVWGICMRTPEL*SYRRLG
Trigger: GCCGAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCT...CATGCAGATACCCCAGACTGACCACTCTTGAGCAATAAAGTGGCCTGAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR GCA 90 bp GATCAGCTCTGTGTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATTCCGCTCGCCTCCGCTaGTACCACTTTTACCGCGGC +
Preference number: 4 (lower is better)
Translates to: DQLCVKQLCDQDVGTAWHSARLR*YHFYRG
Trigger: GCCGCGGTAAAAGTGGTAGCAGCGGAGGCGAGCGGA...ATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGACACAGAGCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562381.7
CDS-3UTR CCA 90 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTCAGTTAGGGGTGCGATaGTTGGAGCTACTGCGGTCT +
Preference number: 4 (lower is better)
Translates to: GARGQQCKDATRCNTAQSQLGVR*LELLRS
Trigger: AGACCGCAGTAGCTCCAACCATCGCACCCCTAACTG...AGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR CCA 90 bp GTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCCCGTGGTCGGATTaGCCCGACTGCAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: VKQLCDQDVGTAWHVTLWTPWSD*PDCRRS
Trigger: AGATCTTCTGCAGTCGGGCCAATCCGACCACGGGGT...CCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CCA 90 bp TGGCATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACACTCCACAGACCCCGTaGTCGGATTGGCCCGACTGC +
Preference number: 4 (lower is better)
Translates to: WHVTLWTYSHLGGMLVDNTPQTP*SDWPDC
Trigger: GCAGTCGGGCCAATCCGACCACGGGGTCTGTGGAGT...GTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CCA 90 bp CGGCATGGCATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGTGGCATGTCACCCTCTaGACCTACAGTCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: RHGMSPSGPTVTSVECLLWHVTL*TYSHLG
Trigger: ACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCA...CAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCATGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CCA 90 bp ACAAGATGCAACACGGCGCAGTCTTTCCCATCCCTGAGGCCGAGCAGCTCCCAGTGGTCTGCACGTGGATaGGAAATAGCTTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: TRCNTAQSFPSLRPSSSQWSARG*EIACST
Trigger: CGTGGAACAAGCTATTTCCCATCCACGTGCAGACCA...CTGGGAGCTGCTCGGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCATACAGGCGGCTCAGGCTGGTCTGCACGTaGATGGGAAATAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PKSALNPRTPELCSYRRLRLVCT*MGNSLF
Trigger: GAACAAGCTATTTCCCATCCACGTGCAGACCAGCCT...GAGCCGCCTGTATGAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTTGTCACAGGCTCCTCTTGTaGCAGGAAGTACACACACTG +
Preference number: 4 (lower is better)
Translates to: QPLSWACISGTALGQLPCHRLLL*QEVHTL
Trigger: CAGTGTGTGTACTTCCTGCCACAAGAGGAGCCTGTG...ACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGCACAGGCTCCTCTTGTaGCAGGAAGTACACACACTG +
Preference number: 4 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKHRLLL*QEVHTL
Trigger: CAGTGTGTGTACTTCCTGCCACAAGAGGAGCCTGTG...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGTGGCTCTCGATCAGTTCTGTCCTaGTCATTGATCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: ACTPGSGGTPSIAPLRGSRSVLS*SLISPN
Trigger: GTTTGGAGAGATCAATGACCAGGACAGAACTGATCG...AGAGCCACGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CCA 90 bp AGGACAGGCACTGCCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCGAGGCCAGACACCTATaGATGTGGCTTGAAGTTACC +
Preference number: 4 (lower is better)
Translates to: RTGTAQVCPESEDTGTLLEARHL*MWLEVT
Trigger: GGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTC...GAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GTGTGTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGGAGGCCAGACACCTATaGATGTGGCTTGAAGTTACC +
Preference number: 4 (lower is better)
Translates to: VCERSKATAPTDLPGEAAEARHL*MWLEVT
Trigger: GGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTC...CGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCACACAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTTGTCTGGGTTCTCTCACGTaGTGTCTGCTGTTACCTCTG +
Preference number: 4 (lower is better)
Translates to: QPLSWACISGTALGQLPCLGSLT*CLLLPL
Trigger: CAGAGGTAACAGCAGACACCACGTGAGAGAACCCAG...ACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GACAGGACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCTGTATTGTATCTTCATaGGACATTAGGGGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: DRTGSRHGDCSPRAAWTTCIVSS*DIRGFL
Trigger: TAGAAAACCCCTAATGTCCCATGAAGATACAATACA...GGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000441236.3
CDS-3UTR CCA 90 bp GGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGGGTGGGTATAGCTATGCAAAATaGAGTGATACGTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GSARARRGCGMGTPTAGGYSYAK*SDTFFR
Trigger: CCTGAAGAACGTATCACTCCATTTTGCATAGCTATA...CCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR TCA 90 bp GTCCAGGGCACGCTTAATCATGTCGTCCATGATGTGCACGTCGAAGCCTTCGCAAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: VQGTLNHVVHDVHVEAFASRHLL*PPSLTR
Trigger: TCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACT...TGCGAAGGCTTCGACGTGCACATCATGGACGACATGATTAAGCGTGCCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR TCA 90 bp AGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACAGTCACCTCGGTGTGTAAAGTCGGCTGGTaGCACCTGGTTCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: RMLARHGMSPSGPTVTSVCKVGW*HLVQLN
Trigger: ATTCAGCTGAACCAGGTGTCACCAGCCGACTTTACA...CACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR TCA 90 bp ATGCCTGAACTCCATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGGGCCATGGTGCACTTaGTCTTCCCCTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: MPELHDDVACVGVKLHCIGPWCT*SSPQGP
Trigger: TGGACCCTGAGGGGAAGATCAAGTGCACCATGGCCC...TATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATGGAGTTCAGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR TCA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGTTTCTCAACAGTTTGTaGGAAGCTGCTGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: VREARPRHLLTFLVKRRWFLNSL*EAAELS
Trigger: CGAGAGTTCAGCAGCTTCTCACAAACTGTTGAGAAA...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACCCTATGGATGTGGCTTaGAGTTACCTGTCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNPMDVA*SYLSGE
Trigger: TTCACCTGACAGGTAACTTCAAGCCACATCCATAGG...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCCCTATGGATGTGGCTTaGAGTTACCTGTCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SQKSRDPEILESETDRTGPMDVA*SYLSGE
Trigger: TTCACCTGACAGGTAACTTCAAGCCACATCCATAGG...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGAGGGGCTTTCCAATCTaGGGGAGGTGCAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGRGFPI*GRCREQ
Trigger: CTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCT...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp CGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAAAAGGTTCAAATaGGCCTCACAAGTTCATCTA +
Preference number: 4 (lower is better)
Translates to: RHGYSHSGWGSASLLSLKSKRFK*ASQVHL
Trigger: TAGATGAACTTGTGAGGCTCATTTGAACCTTTTGGA...CTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp AAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCACAGAAAAGCAGCCTTaGCAGTTGAGTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: KSRDPEILESETDRTGSRTEKQP*QLSSCG
Trigger: TCCACAAGAACTCAACTGGCAAGGCTGCTTTTCTGT...GCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GGAGAGGAGGGCCTTCAGCCTTCCCCGCTAGAAAGCCATGAGCCACTCAGAACCAGAAGATCTTCATGGTaGCCACTAGCTCCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: GEEGLQPSPLESHEPLRTRRSSW*PLAPQF
Trigger: AAACTGGGGAGCTAGTGGGCACCATGAAGATCTTCT...GGTTCTGAGTGGCTCATGGCTTTCTAGCGGGGAAGGCTGAAGGCCCTCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CAGCGCCCCCTCCCCGATCAGCTCTGTGTCAAACAACTCTGTGACCAGGATGTTTCGGATTGGCCCGACTaGAGAAGATCTTCATGGTGC +
Preference number: 4 (lower is better)
Translates to: QRPLPDQLCVKQLCDQDVSDWPD*RRSSWC
Trigger: GCACCATGAAGATCTTCTGCAGTCGGGCCAATCCGA...AACATCCTGGTCACAGAGTTGTTTGACACAGAGCTGATCGGGGAGGGGGCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000562381.7
CDS-3UTR GCA 90 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTCGGATTGGCCCGACTaGAGAAGATCTTCATGGTGC +
Preference number: 4 (lower is better)
Translates to: GARGQQCKDATRCNTAQSSDWPD*RRSSWC
Trigger: GCACCATGAAGATCTTCTGCAGTCGGGCCAATCCGA...AGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp ATCAGCTCTGTGTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGCTCTGTCCTTCACCCTaGTCACGGCAGCCCGGATAC +
Preference number: 4 (lower is better)
Translates to: ISSVSNNSVTRMLARHGMLCPSP*SRQPGY
Trigger: GTATCCGGGCTGCCGTGAGCAGGGTGAAGGACAGAG...CATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGACACAGAGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR GCA 90 bp GTGACCGCCATCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCAAGAGAGTCCCGTGCCAGTaGCAATGTCGAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: VTAIIDKSPVPVPMSRTKRVPCQ*QCREPR
Trigger: CCTTGGTTCTCGACATTGGCACTGGCACGGGACTCT...CTTGGTTCTCGACATTGGCACTGGCACGGGACTCTTGTCAATGATGGCGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
CDS-3UTR GCA 90 bp GTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGAGAGTCCCGTGCCAGTaGCAATGTCGAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: VKQLCDQDVGTAWHVTLWRVPCQ*QCREPR
Trigger: CCTTGGTTCTCGACATTGGCACTGGCACGGGACTCT...CCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR GCA 90 bp GCTTCCCTGCTCTCCCTGAAGTCCAGGGCACGCTTAATCATGTCGTCCATGATGAGAGTCCCGTGCCAGTaGCAATGTCGAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: ASLLSLKSRARLIMSSMMRVPCQ*QCREPR
Trigger: CCTTGGTTCTCGACATTGGCACTGGCACGGGACTCT...CATCATGGACGACATGATTAAGCGTGCCCTGGACTTCAGGGAGAGCAGGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGCACGAGATGCCTGTGTaGGTGCTCATAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGHEMPV*VLIGGQ
Trigger: CTGCCCTCCTATGAGCACGCACACAGGCATCTCGTG...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATGGACTCCACCAGCTGTaGATAGACGGTGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: EASSAKMQQDATRRSLSHGLHQL*IDGGSV
Trigger: CACAGAGCCACCGTCTATGCACAGCTGGTGGAGTCC...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CTCCCCGATCAGCTCTGTGTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATCTCCGAGGCTGGTCTaGACGTGGATGGGAAATAGC +
Preference number: 4 (lower is better)
Translates to: LPDQLCVKQLCDQDVGTASPRLV*TWMGNS
Trigger: GCTATTTCCCATCCACGTGCAGACCAGCCTCGGAGA...TGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGACACAGAGCTGATCGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR GCA 90 bp CATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGTCTCCGAGGCTGGTCTaGACGTGGATGGGAAATAGC +
Preference number: 4 (lower is better)
Translates to: HDDVACVGVKLHCIADSPSPRLV*TWMGNS
Trigger: GCTATTTCCCATCCACGTGCAGACCAGCCTCGGAGA...CGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp CATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACAGGGCTGAGCTACTGACTTaGTTGCTGAAGTCTATGCTG +
Preference number: 4 (lower is better)
Translates to: HTPPAGGAFQSEGGAGNRAELLT*LLKSML
Trigger: CAGCATAGACTTCAGCAAGCAAGTCAGTAGCTCAGC...CCTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CTTGATCTTCCCCTCAGGGTCCATTTCAATGTCCCACCACGAGAGAACCACCTGGAGGTTCAAACCGCCTaGTATGGCAGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LDLPLRVHFNVPPRENHLEVQTA*YGRLLS
Trigger: GCTCAGCAGCCTGCCATAGCAGGCGGTTTGAACCTC...CAGGTGGTTCTCTCGTGGTGGGACATTGAAATGGACCCTGAGGGGAAGATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR GCA 90 bp ATGCCTGAACTCCATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATATGCAGGGGCACCGGCTaGTGGAAGTCAAAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: MPELHDDVACVGVKLHCICRGTG*WKSKVR
Trigger: CCTGACCTTTGACTTCCAGCAGCCGGTGCCCCTGCA...TATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATGGAGTTCAGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAAGTAGACGGCCTGCTTaGAGTGGGGGTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQASRRPA*SGGSSS
Trigger: GCTGCTGGAACCCCCACTGCAAGCAGGCCGTCTACT...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCAAAGATGCAACAAGATaGAACACGGCGCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: GVLHLFQRQAGARPQGHAKDATR*NTAQSF
Trigger: GAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTT...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGAAAGATGCAACAAGATaGAACACGGCGCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: VREARPRHLLTFLVKRRWKDATR*NTAQSF
Trigger: GAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTT...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCTCAGTCACCCTCTCATaGTTCCTGCCACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GQQCKDATRCNTAQSFPSSVTLS*FLPQLE
Trigger: CTCCAGCTGTGGCAGGAAGCATGAGAGGGTGACTGA...GGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTCTGCCATACCCCACCTaGAGGAGGGGCTTTCCAATC +
Preference number: 4 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCLPYPT*RRGFPI
Trigger: GATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCAG...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp ACAAGATGCAACACGGCGCAGTCTTTCCCATCCCTGAGGCCGAGCAGCTCCCAGCAAAGACAACAGGTCTaGCAATCAGAGAACTCGTGG +
Preference number: 4 (lower is better)
Translates to: TRCNTAQSFPSLRPSSSQQRQQV*QSENSW
Trigger: CCACGAGTTCTCTGATTGCCAGACCTGTTGTCTTTG...CTGGGAGCTGCTCGGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR CCA 90 bp GCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGTGCAGAAGATCTTCATaGTGCCCACTAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ATAGARGQQCKDATRCNTCRRSS*CPLAPQ
Trigger: CTGGGGAGCTAGTGGGCACCATGAAGATCTTCTGCA...CGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CAGCCCTCAGGCCACTTTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGACCCCGTGGTCGGATTaGCCCGACTGCAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: QPSGHFIAQEWSVWGICMTPWSD*PDCRRS
Trigger: AGATCTTCTGCAGTCGGGCCAATCCGACCACGGGGT...CATGCAGATACCCCAGACTGACCACTCTTGAGCAATAAAGTGGCCTGAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CCA 90 bp CATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACCTTACTCCACAGACCCCGTaGTCGGATTGGCCCGACTGC +
Preference number: 4 (lower is better)
Translates to: HVTLWTYSHLGGMLVDNLTPQTP*SDWPDC
Trigger: GCAGTCGGGCCAATCCGACCACGGGGTCTGTGGAGT...AAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CCA 90 bp CATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGTGGCATGTCACCCTCTaGACCTACAGTCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: HDDVACVGVKLHCIADSPWHVTL*TYSHLG
Trigger: ACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCA...CGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CCA 90 bp TGTGTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCGATGTTGGCACGGCATaGCATGTCACCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: CVKQLCDQDVGTAWHVTLDVGTA*HVTLWT
Trigger: GGTCCAGAGGGTGACATGCCATGCCGTGCCAACATC...GAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CCA 90 bp CATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGTCAAACCGCCTGCTATaGCAGGCTGCTGAGCTACTG +
Preference number: 4 (lower is better)
Translates to: HDDVACVGVKLHCIADSPSNRLL*QAAELL
Trigger: CAGTAGCTCAGCAGCCTGCCATAGCAGGCGGTTTGA...CGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTACACACTGCATCCAGTaGTCCCGCCACTGCATCTCC +
Preference number: 4 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCTHCIQ*SRHCIS
Trigger: GGAGATGCAGTGGCGGGACCACTGGATGCAGTGTGT...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GTGAGGCTCAAGGCTGGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCACAGGCTCCTCTTGTaGCAGGAAGTACACACACTG +
Preference number: 4 (lower is better)
Translates to: VRLKAGVLHLFQRQAGARHRLLL*QEVHTL
Trigger: CAGTGTGTGTACTTCCTGCCACAAGAGGAGCCTGTG...CCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACCAGCCTTGAGCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCACGGTCCTCAGAGCCTaGACGTATCGATCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: HSWSQRPAVQRCNKMQHGTVLRA*TYRSVL
Trigger: CAGAACTGATCGATACGTCCAGGCTCTGAGGACCGT...GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAACGGTCCTCAGAGCCTaGACGTATCGATCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PETQPQLSISTLLAEARRTVLRA*TYRSVL
Trigger: CAGAACTGATCGATACGTCCAGGCTCTGAGGACCGT...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCACAGGCACACGCTGTCTaGCTTCAGCACGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQAQAHAV*LQHGPQ
Trigger: CTGAGGACCGTGCTGAAGCCAGACAGCGTGTGCCTG...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGCACTCCGGGGTCAGGTaGTACTCCATCCATAGCACC +
Preference number: 4 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGHSGVR*YSIHST
Trigger: GGTGCTATGGATGGAGTACCACCTGACCCCGGAGTG...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GTGAGGCTCAAGGCTGGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCTGGGTTCTCTCACGTaGTGTCTGCTGTTACCTCTG +
Preference number: 4 (lower is better)
Translates to: VRLKAGVLHLFQRQAGARLGSLT*CLLLPL
Trigger: CAGAGGTAACAGCAGACACCACGTGAGAGAACCCAG...CCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACCAGCCTTGAGCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp TCAGGCCACTTTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCCTGAAGCGGCTCGGCTGGCCTaGCACAAGCCTCACCTTCTA +
Preference number: 4 (lower is better)
Translates to: SGHFIAQEWSVWGICMPEAARLA*HKPHLL
Trigger: TAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGC...TTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAAAGTGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
3UTR CAA 72 bp CGCCTGCTATGGCAGGCTGCTGAGCTACTGACTTGCTaGCTGAAGTCTATGCTGAACATGGGCAGCACATCG +
Preference number: 4 (lower is better)
Translates to: RLLWQAAELLTC*LKSMLNMGSTS
Trigger: CGATGTGCTGCCCATGTTCAGCATAGACTTCAGCAAGCAAGTCAGTAGCTCAGCAGCCTGCCATAGCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR TCA 90 bp GTGAGGCTCAAGGCTGGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGAATGTGCCAAAAGCCTaGGCGACCGAAGCACTTTTG +
Preference number: 4 (lower is better)
Translates to: VRLKAGVLHLFQRQAGARNVPKA*ATEALL
Trigger: CAAAAGTGCTTCGGTCGCTCAGGCTTTTGGCACATT...CCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACCAGCCTTGAGCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR TCA 90 bp GCTGTGACCGCCATCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCAGCAGCCTTGCCAGTTaGGTTCTTGTGGACAAGTCT +
Preference number: 4 (lower is better)
Translates to: AVTAIIDKSPVPVPMSRTSSLAS*VLVDKS
Trigger: AGACTTGTCCACAAGAACTCAACTGGCAAGGCTGCT...GGTTCTCGACATTGGCACTGGCACGGGACTCTTGTCAATGATGGCGGTCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
CDS-3UTR TCA 90 bp CGGCATGGCATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGAGCAGCCTTGCCAGTTaGGTTCTTGTGGACAAGTCT +
Preference number: 4 (lower is better)
Translates to: RHGMSPSGPTVTSVECLLSSLAS*VLVDKS
Trigger: AGACTTGTCCACAAGAACTCAACTGGCAAGGCTGCT...CAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCATGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR TCA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACCATATCTGCATAAGATaGCCTTGCAATCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNHICIR*PCNLLV
Trigger: CACCAGGAGATTGCAAGGTCATCTTATGCAGATATG...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTTTCTCAACAGTTTGTaGGAAGCTGCTGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: SQKSRDPEILESETDRTGFLNSL*EAAELS
Trigger: CGAGAGTTCAGCAGCTTCTCACAAACTGTTGAGAAA...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GTGACCGCCATCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCAAGTCTTGTGGACAAGTCTaGCTGTCAGAAATCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VTAIIDKSPVPVPMSRTKSCGQV*LSEIRR
Trigger: GCGGCGGATTTCTGACAGTCAGACTTGTCCACAAGA...CTTGGTTCTCGACATTGGCACTGGCACGGGACTCTTGTCAATGATGGCGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR GCA 90 bp GCTCATAGGAGGGCAGCGCCCCCTCCCCGATCAGCTCTGTGTCAAACAACTCTGACAGAAAAGCAGCCTTaGCAGTTGAGTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: AHRRAAPPPRSALCQTTLTEKQP*QLSSCG
Trigger: TCCACAAGAACTCAACTGGCAAGGCTGCTTTTCTGT...CAGAGTTGTTTGACACAGAGCTGATCGGGGAGGGGGCGCTGCCCTCCTATGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000562381.7
CDS-3UTR GCA 90 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTGACAAGAGTCCCGTaGCAGTGCCAATGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: GARGQQCKDATRCNTAQSLTRVP*QCQCRE
Trigger: TTCTCGACATTGGCACTGGCACGGGACTCTTGTCAA...AGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp TGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACAGTCACTTGACAAGAGTCCCGTaGCAGTGCCAATGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: CDQDVGTAWHVTLWTYSHLTRVP*QCQCRE
Trigger: TTCTCGACATTGGCACTGGCACGGGACTCTTGTCAA...GTGACTGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR GCA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCGTCACCTCGGTGGAATaGTTGTTGATAACCTTAATC +
Preference number: 4 (lower is better)
Translates to: GVLHLFQRQAGARPQGHAVTSVE*LLITLI
Trigger: GATTAAGGTTATCAACAAGCATTCCACCGAGGTGAC...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp ATCAGCTCTGTGTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGCACGAGATGCCTGTGTaGGTGCTCATAGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ISSVSNNSVTRMLARHGMHEMPV*VLIGGQ
Trigger: CTGCCCTCCTATGAGCACGCACACAGGCATCTCGTG...CATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGACACAGAGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000562381.7
CDS-3UTR GCA 90 bp ATGCCTGAACTCCATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGAGGTTCAAACCGCCTaGTATGGCAGGCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: MPELHDDVACVGVKLHCIEVQTA*YGRLLS
Trigger: GCTCAGCAGCCTGCCATAGCAGGCGGTTTGAACCTC...TATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATGGAGTTCAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAGGAGAGAGACCTTTCTaGCCTGTAGGTCCTCATTTG +
Preference number: 4 (lower is better)
Translates to: PETQPQLSISTLLAEARRGERPF*PVGPHL
Trigger: CAAATGAGGACCTACAGGGCAGAAAGGTCTCTCTCC...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGTCAGTCACCCTCTCATaGTTCCTGCCACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGSVTLS*FLPQLE
Trigger: CTCCAGCTGTGGCAGGAAGCATGAGAGGGTGACTGA...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAGCAGGTTCAGGAAAATGGTaGATCGGTGACCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: ETQPQLSISTLLAEARRAGSGKW*IGDHRK
Trigger: CTTCCTGTGGTCACCGATGCACCATTTTCCTGAACC...TGCTCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR CCA 90 bp AGGACAGGCACTGCCCAAGTCTGCCCTGAATCCGAGGACACCGGAACTCTGCTCCCAGTTGAGTTCTTGTaGACAAGTCTGACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: RTGTAQVCPESEDTGTLLPVEFL*TSLTVR
Trigger: TCTGACAGTCAGACTTGTCCACAAGAACTCAACTGG...GAGCAGAGTTCCGGTGTCCTCGGATTCAGGGCAGACTTGGGCAGTGCCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GGCAGCGCCCCCTCCCCGATCAGCTCTGTGTCAAACAACTCTGTGACCAGGATGCCAGTTGAGTTCTTGTaGACAAGTCTGACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: GSAPSPISSVSNNSVTRMPVEFL*TSLTVR
Trigger: TCTGACAGTCAGACTTGTCCACAAGAACTCAACTGG...CATCCTGGTCACAGAGTTGTTTGACACAGAGCTGATCGGGGAGGGGGCGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000562381.7
CDS-3UTR CCA 90 bp AAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTGCAGAAGATCTTCATaGTGCCCACTAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: KQLCDQDVGTAWHVTLWTCRRSS*CPLAPQ
Trigger: CTGGGGAGCTAGTGGGCACCATGAAGATCTTCTGCA...GGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CCA 90 bp CATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGTGCAGAAGATCTTCATaGTGCCCACTAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: HDDVACVGVKLHCIADSPCRRSS*CPLAPQ
Trigger: CTGGGGAGCTAGTGGGCACCATGAAGATCTTCTGCA...CGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CCA 90 bp TGGCATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACGATGTTGGCACGGCATaGCATGTCACCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: WHVTLWTYSHLGGMLVDNDVGTA*HVTLWT
Trigger: GGTCCAGAGGGTGACATGCCATGCCGTGCCAACATC...GTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CCA 90 bp GGGGCCATGGTGCACTTGATCTTCCCCTCAGGGTCCATTTCAATGTCCCACCACTGGTCTGCACGTGGATaGGAAATAGCTTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: GAMVHLIFPSGSISMSHHWSARG*EIACST
Trigger: CGTGGAACAAGCTATTTCCCATCCACGTGCAGACCA...GTGGTGGGACATTGAAATGGACCCTGAGGGGAAGATCAAGTGCACCATGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR CCA 90 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTGGTCTGCACGTGGATaGGAAATAGCTTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: GARGQQCKDATRCNTAQSWSARG*EIACST
Trigger: CGTGGAACAAGCTATTTCCCATCCACGTGCAGACCA...AGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCCATTCTTTTCAGGGCTaGTCCTCTGCAGGCTGTACC +
Preference number: 4 (lower is better)
Translates to: GQQCKDATRCNTAQSFPSHSFQG*SSAGCT
Trigger: GGTACAGCCTGCAGAGGACCAGCCCTGAAAAGAATG...GGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp TTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCCTGAACTCCATGATGTACTCCCACAGCGGGTaGGGCTCAGCTTCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LLLKSGQSGVSACLNSMMYSHSG*GSASLL
Trigger: GAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTA...CATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CCA 90 bp GGAGAGGAGGGCCTTCAGCCTTCCCCGCTAGAAAGCCATGAGCCACTCAGAACCTTTATTGCTCAAGAGTaGTCAGTCTGGGGTATCTGC +
Preference number: 4 (lower is better)
Translates to: GEEGLQPSPLESHEPLRTFIAQE*SVWGIC
Trigger: GCAGATACCCCAGACTGACCACTCTTGAGCAATAAA...GGTTCTGAGTGGCTCATGGCTTTCTAGCGGGGAAGGCTGAAGGCCCTCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCACTCCCTTCCCAGCTaGGGAGAGATGTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: EASSAKMQQDATRRSLSHHSLPS*GEMSLC
Trigger: ACACAGAGACATCTCTCCCCAGCTGGGAAGGGAGTG...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp CTGAAGTCTATGCTGAACATGGGCAGCACATCGCTGAGGACTGTAAAGTCGGCTAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: LKSMLNMGSTSLRTVKSASRHLL*PPSLTR
Trigger: TCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACT...AGCCGACTTTACAGTCCTCAGCGATGTGCTGCCCATGTTCAGCATAGACTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR TCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQASRHLL*PPSLTR
Trigger: TCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACT...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp TTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCCTGAACTCCATGATGTACCAGATAGAGCGCTaGGCCCTGCACCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLLKSGQSGVSACLNSMMYQIER*ALHHRL
Trigger: GAGCCTGTGGTGCAGGGCTCAGCGCTCTATCTGGTA...CATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR TCA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATTTCTGTCCTGGTCATTaGTCTCTCCAAACCGAGGCC +
Preference number: 4 (lower is better)
Translates to: EASSAKMQQDATRRSLSHFCPGH*SLQTEA
Trigger: GGCCTCGGTTTGGAGAGATCAATGACCAGGACAGAA...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAAGAGTCCCGTGCCAGTaGCAATGTCGAGAACCAAGG +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQARVPCQ*QCREPR
Trigger: CCTTGGTTCTCGACATTGGCACTGGCACGGGACTCT...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GCTCATAGGAGGGCAGCGCCCCCTCCCCGATCAGCTCTGTGTCAAACAACTCTGGTCACCTCGGTGGAATaGTTGTTGATAACCTTAATC +
Preference number: 4 (lower is better)
Translates to: AHRRAAPPPRSALCQTTLVTSVE*LLITLI
Trigger: GATTAAGGTTATCAACAAGCATTCCACCGAGGTGAC...CAGAGTTGTTTGACACAGAGCTGATCGGGGAGGGGGCGCTGCCCTCCTATGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000562381.7
CDS-3UTR GCA 90 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTGCTGAGCTACTGACTTaGTTGCTGAAGTCTATGCTG +
Preference number: 4 (lower is better)
Translates to: GARGQQCKDATRCNTAQSAELLT*LLKSML
Trigger: CAGCATAGACTTCAGCAAGCAAGTCAGTAGCTCAGC...AGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCAAGGCCTTCTGTCCTCTGTCCGCTGAGCTACTGACTTaGTTGCTGAAGTCTATGCTG +
Preference number: 4 (lower is better)
Translates to: KSPVPVPMSRTKAFCPLSAELLT*LLKSML
Trigger: CAGCATAGACTTCAGCAAGCAAGTCAGTAGCTCAGC...GGACAGAGGACAGAAGGCCTTGGTTCTCGACATTGGCACTGGCACGGGACTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR GCA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAGCTGAGCTACTGACTTaGTTGCTGAAGTCTATGCTG +
Preference number: 4 (lower is better)
Translates to: PETQPQLSISTLLAEARRAELLT*LLKSML
Trigger: CAGCATAGACTTCAGCAAGCAAGTCAGTAGCTCAGC...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GTGAGGCTCAAGGCTGGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGTCTGGGGTATCTGCATaGCTGAACTCCATGATGATG +
Preference number: 4 (lower is better)
Translates to: VRLKAGVLHLFQRQAGARSGVSA*LNSMMM
Trigger: CATCATCATGGAGTTCAGGCATGCAGATACCCCAGA...CCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACCAGCCTTGAGCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGTGGTCTGGGGTATCTGCATaGCTGAACTCCATGATGATG +
Preference number: 4 (lower is better)
Translates to: DDVACVGVKLHCIADSPWSGVSA*LNSMMM
Trigger: CATCATCATGGAGTTCAGGCATGCAGATACCCCAGA...CCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp GCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGTCTGGGGTATCTGCATaGCTGAACTCCATGATGATG +
Preference number: 4 (lower is better)
Translates to: ATAGARGQQCKDATRCNTSGVSA*LNSMMM
Trigger: CATCATCATGGAGTTCAGGCATGCAGATACCCCAGA...CGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGCATTCTTTTCAGGGCTaGTCCTCTGCAGGCTGTACC +
Preference number: 4 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGHSFQG*SSAGCT
Trigger: GGTACAGCCTGCAGAGGACCAGCCCTGAAAAGAATG...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGTTTATTGCTCAAGAGTaGTCAGTCTGGGGTATCTGC +
Preference number: 4 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKFIAQE*SVWGIC
Trigger: GCAGATACCCCAGACTGACCACTCTTGAGCAATAAA...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGAGATGTCTCTGTGTTaGAGCATTCTCAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: HSWSQRPAVQRCNKMQHGEMSLC*SILSTS
Trigger: TGAGGTGCTGAGAATGCTCCAACACAGAGACATCTC...GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGAGATGTCTCTGTGTTaGAGCATTCTCAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: ATAGARGQQCKDATRCNTEMSLC*SILSTS
Trigger: TGAGGTGCTGAGAATGCTCCAACACAGAGACATCTC...CGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCATCTCAGGAACTGCTCTaGGACAGCTGCCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQASQELL*DSCLVS
Trigger: GGACACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGA...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACCTTAATCTTATCCGTCGAGGAGCGTGCTaGGGGGCGGGTCCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: LWTYSHLGGMLVDNLNLIRRGAC*GAGPKA
Trigger: TGCTTTAGGACCCGCCCCCCAGCACGCTCCTCGACG...GATAAGATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562381.7
CDS-3UTR TCA 90 bp CATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACCTTTGTGACCGCCATCATTaGCAAGAGTCCCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: HVTLWTYSHLGGMLVDNLCDRHH*QESRAS
Trigger: ACTGGCACGGGACTCTTGTCAATGATGGCGGTCACA...AAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR TCA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGATTTGTGAGAAGCTGCTaGACTCTCGACTGTAAACAC +
Preference number: 4 (lower is better)
Translates to: PETQPQLSISTLLAEARRFVRSC*TLDCKH
Trigger: GTGTTTACAGTCGAGAGTTCAGCAGCTTCTCACAAA...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGTTTGTGAGAAGCTGCTaGACTCTCGACTGTAAACAC +
Preference number: 4 (lower is better)
Translates to: ATAGARGQQCKDATRCNTFVRSC*TLDCKH
Trigger: GTGTTTACAGTCGAGAGTTCAGCAGCTTCTCACAAA...CGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGATTTCTCAACAGTTTGTaGGAAGCTGCTGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: PETQPQLSISTLLAEARRFLNSL*EAAELS
Trigger: CGAGAGTTCAGCAGCTTCTCACAAACTGTTGAGAAA...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GTGAGGCTCAAGGCTGGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGGAGAAAATAAAACTGTaGGGCTCAAGGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: VRLKAGVLHLFQRQAGAREKIKL*GSRLVF
Trigger: GAACACCAGCCTTGAGCCTCACAGTTTTATTTTCTC...CCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACCAGCCTTGAGCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp GGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTTCCTTACTGGTGCTaGAAGGAAGGATGGATAACG +
Preference number: 4 (lower is better)
Translates to: GARGQQCKDATRCNTAQSFPYWC*KEGWIT
Trigger: CGTTATCCATCCTTCCTTTCAGCACCAGTAAGGAAA...AGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp TTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCCTGAACTCCATGATGGTTCCCTGCACACCCTaGACTCCACAACCACAGCGT +
Preference number: 4 (lower is better)
Translates to: LLLKSGQSGVSACLNSMMVPCTP*TPQPQR
Trigger: ACGCTGTGGTTGTGGAGTTCAGGGTGTGCAGGGAAC...CATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR GCA 90 bp GCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGACAGAAAAGCAGCCTTaGCAGTTGAGTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: ATAGARGQQCKDATRCNTTEKQP*QLSSCG
Trigger: TCCACAAGAACTCAACTGGCAAGGCTGCTTTTCTGT...CGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCAGAAGATCTTCATGGTaGCCACTAGCTCCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: KQLCDQDVGTAWHVTLWTRRSSW*PLAPQF
Trigger: AAACTGGGGAGCTAGTGGGCACCATGAAGATCTTCT...GGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR GCA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGGTCACCTCGGTGGAATaGTTGTTGATAACCTTAATC +
Preference number: 4 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKVTSVE*LLITLI
Trigger: GATTAAGGTTATCAACAAGCATTCCACCGAGGTGAC...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACAGTCACCTCGTCACCTCGGTGGAATaGTTGTTGATAACCTTAATC +
Preference number: 4 (lower is better)
Translates to: DQDVGTAWHVTLWTYSHLVTSVE*LLITLI
Trigger: GATTAAGGTTATCAACAAGCATTCCACCGAGGTGAC...GAGGTGACTGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR GCA 90 bp TTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCCTGAACTCCATGATGGGACTCCACCAGCTGTaGATAGACGGTGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LLLKSGQSGVSACLNSMMGLHQL*IDGGSV
Trigger: CACAGAGCCACCGTCTATGCACAGCTGGTGGAGTCC...CATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp GGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCTCAGTCTGGGGTATCTaGATGCCTGAACTCCATGAT +
Preference number: 4 (lower is better)
Translates to: GQQCKDATRCNTAQSFPSSVWGI*MPELHD
Trigger: ATCATGGAGTTCAGGCATGCAGATACCCCAGACTGA...GGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGCCAGCAGTGCAAAGATaGAACAAGATGCAACACGGC +
Preference number: 4 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGPAVQR*NKMQHG
Trigger: GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGG...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp CAGCCCTCAGGCCACTTTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCCAGCAGTGCAAAGATaGAACAAGATGCAACACGGC +
Preference number: 4 (lower is better)
Translates to: QPSGHFIAQEWSVWGICMPAVQR*NKMQHG
Trigger: GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGG...CATGCAGATACCCCAGACTGACCACTCTTGAGCAATAAAGTGGCCTGAGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR CCA 90 bp AAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCAAGGCCTTCTGTCCTCTGTCCCCAGTTGAGTTCTTGTaGACAAGTCTGACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: KSPVPVPMSRTKAFCPLSPVEFL*TSLTVR
Trigger: TCTGACAGTCAGACTTGTCCACAAGAACTCAACTGG...GGACAGAGGACAGAAGGCCTTGGTTCTCGACATTGGCACTGGCACGGGACTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
CDS-3UTR CCA 90 bp CATGGCATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATATGCAGAAGATCTTCATaGTGCCCACTAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: HGMSPSGPTVTSVECLLICRRSS*CPLAPQ
Trigger: CTGGGGAGCTAGTGGGCACCATGAAGATCTTCTGCA...TATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTAGGCTGGTCTGCACGTaGATGGGAAATAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCRLVCT*MGNSLF
Trigger: GAACAAGCTATTTCCCATCCACGTGCAGACCAGCCT...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTCAAGAGTGGTCAGTCTaGGGTATCTGCATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCQEWSV*GICMPE
Trigger: TTCAGGCATGCAGATACCCCAGACTGACCACTCTTG...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAGCATTTATTGCTCAAGAGTaGTCAGTCTGGGGTATCTGC +
Preference number: 4 (lower is better)
Translates to: ETQPQLSISTLLAEARRAFIAQE*SVWGIC
Trigger: GCAGATACCCCAGACTGACCACTCTTGAGCAATAAA...TGCTCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp CACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCAGACACCTATGGATGTaGCTTGAAGTTACCTGTCAG +
Preference number: 4 (lower is better)
Translates to: HSWSQRPAVQRCNKMQHGRHLWM*LEVTCQ
Trigger: CTGACAGGTAACTTCAAGCCACATCCATAGGTGTCT...GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp ATGCCTGAACTCCATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAAGCAGCCTTGCCAGTTaGGTTCTTGTGGACAAGTCT +
Preference number: 4 (lower is better)
Translates to: MPELHDDVACVGVKLHCISSLAS*VLVDKS
Trigger: AGACTTGTCCACAAGAACTCAACTGGCAAGGCTGCT...TATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATGGAGTTCAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGTGCATAAGCAAAATGTaGCAAAAGCCTGAGCGACCG +
Preference number: 4 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGCISKM*QKPERP
Trigger: CGGTCGCTCAGGCTTTTGGCACATTTTGCTTATGCA...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR GCA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATAGAAGATCTTCATGGTaGCCACTAGCTCCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: EASSAKMQQDATRRSLSHRRSSW*PLAPQF
Trigger: AAACTGGGGAGCTAGTGGGCACCATGAAGATCTTCT...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AAGTCTATGCTGAACATGGGCAGCACATCGCTGAGGACTGTAAAGTCGGCTGGTTTGACAAGAGTCCCGTaGCAGTGCCAATGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: KSMLNMGSTSLRTVKSAGLTRVP*QCQCRE
Trigger: TTCTCGACATTGGCACTGGCACGGGACTCTTGTCAA...ACCAGCCGACTTTACAGTCCTCAGCGATGTGCTGCCCATGTTCAGCATAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR GCA 90 bp TTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCCTGAACTCCATGATGGGGGTGAAACTCCACTaGATAGCTGACAGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: LLLKSGQSGVSACLNSMMGVKLH*IADSPW
Trigger: CCACGGACTGTCAGCTATGCAGTGGAGTTTCACCCC...CATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTTCAGTCTGGGGTATCTaGATGCCTGAACTCCATGAT +
Preference number: 4 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCSVWGI*MPELHD
Trigger: ATCATGGAGTTCAGGCATGCAGATACCCCAGACTGA...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp AACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACACCAGTTGAGTTCTTGTaGACAAGTCTGACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: NSVTRMLARHGMSPSGPTPVEFL*TSLTVR
Trigger: TCTGACAGTCAGACTTGTCCACAAGAACTCAACTGG...TGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CCA 90 bp TTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCCTGAACTCCATGATGCACACGGGGCGCATCTaGCGGACTCTCTCATTCTTT +
Preference number: 4 (lower is better)
Translates to: LLLKSGQSGVSACLNSMMHTGRI*RTLSFF
Trigger: AAAGAATGAGAGAGTCCGCCAGATGCGCCCCGTGTG...CATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCACAAGAGTGGTCAGTCTaGGGTATCTGCATGCCTGAA +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQAQEWSV*GICMPE
Trigger: TTCAGGCATGCAGATACCCCAGACTGACCACTCTTG...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp TTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCCTGAACTCCATGATGTCTCAGGAACTGCTCTaGGACAGCTGCCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LLLKSGQSGVSACLNSMMSQELL*DSCLVS
Trigger: GGACACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGA...CATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR TCA 90 bp GTGTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTCATATCTGCATAAGATaGCCTTGCAATCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VSNNSVTRMLARHGMSPSHICIR*PCNLLV
Trigger: CACCAGGAGATTGCAAGGTCATCTTATGCAGATATG...AGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562381.7
CDS-3UTR TCA 90 bp ACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACCTTAATCTTTGTGACCGCCATCATTaGCAAGAGTCCCGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: TLWTYSHLGGMLVDNLNLCDRHH*QESRAS
Trigger: ACTGGCACGGGACTCTTGTCAATGATGGCGGTCACA...AAGATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR TCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCACCTATGGATGTGGCTTaGAGTTACCTGTCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQAPMDVA*SYLSGE
Trigger: TTCACCTGACAGGTAACTTCAAGCCACATCCATAGG...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTTTTCCTTACTGGTGCTaGAAGGAAGGATGGATAACG +
Preference number: 4 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCFPYWC*KEGWIT
Trigger: CGTTATCCATCCTTCCTTTCAGCACCAGTAAGGAAA...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR GCA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTTCCTATCACATCTTCTaGTCAATCAAGCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCSYHIF*SIKLGL
Trigger: AAGGCCCAGCTTGATTGAGCAGAAGATGTGATAGGA...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR GCA 90 bp CAGCCCTCAGGCCACTTTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGACAGAAAAGCAGCCTTaGCAGTTGAGTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: QPSGHFIAQEWSVWGICMTEKQP*QLSSCG
Trigger: TCCACAAGAACTCAACTGGCAAGGCTGCTTTTCTGT...CATGCAGATACCCCAGACTGACCACTCTTGAGCAATAAAGTGGCCTGAGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp AGCTCTGTGTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCAAGAAGATCTTCATGGTaGCCACTAGCTCCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SSVSNNSVTRMLARHGMSRRSSW*PLAPQF
Trigger: AAACTGGGGAGCTAGTGGGCACCATGAAGATCTTCT...TGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGACACAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR GCA 90 bp TCAGGCCACTTTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCCTGAATTGACAAGAGTCCCGTaGCAGTGCCAATGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: SGHFIAQEWSVWGICMPELTRVP*QCQCRE
Trigger: TTCTCGACATTGGCACTGGCACGGGACTCTTGTCAA...TTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAAAGTGGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR GCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCATCTGGGGTATCTGCATaGCTGAACTCCATGATGATG +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQASGVSA*LNSMMM
Trigger: CATCATCATGGAGTTCAGGCATGCAGATACCCCAGA...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCGATCAGTTCTGTCCTaGTCATTGATCTCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: EASSAKMQQDATRRSLSHRSVLS*SLISPN
Trigger: GTTTGGAGAGATCAATGACCAGGACAGAACTGATCG...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATAGACACCTATGGATGTaGCTTGAAGTTACCTGTCAG +
Preference number: 4 (lower is better)
Translates to: EASSAKMQQDATRRSLSHRHLWM*LEVTCQ
Trigger: CTGACAGGTAACTTCAAGCCACATCCATAGGTGTCT...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR TCA 90 bp TGGGGAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGAGAAAATAAAACTGTaGGGCTCAAGGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: WGEMSLCWSILSTSEAQAEKIKL*GSRLVF
Trigger: GAACACCAGCCTTGAGCCTCACAGTTTTATTTTCTC...TGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CCA 90 bp TCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACCTTAATCTTATCAGATGTTGGCACGGCATaGCATGTCACCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: SGPTVTSVECLLITLILSDVGTA*HVTLWT
Trigger: GGTCCAGAGGGTGACATGCCATGCCGTGCCAACATC...TGATAAGATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR TCA 90 bp TCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACCTTAATCTTATCAAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGA +
Preference number: 4 (lower is better)
Translates to: SGPTVTSVECLLITLILSSRHLL*PPSLTR
Trigger: TCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACT...TGATAAGATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR GCA 90 bp CATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACCTTACAGAAAAGCAGCCTTaGCAGTTGAGTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: HVTLWTYSHLGGMLVDNLTEKQP*QLSSCG
Trigger: TCCACAAGAACTCAACTGGCAAGGCTGCTTTTCTGT...AAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR GCA 90 bp CTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACCTTAATCTTATCTCGGATTGGCCCGACTaGAGAAGATCTTCATGGTGC +
Preference number: 4 (lower is better)
Translates to: LWTYSHLGGMLVDNLNLISDWPD*RRSSWC
Trigger: GCACCATGAAGATCTTCTGCAGTCGGGCCAATCCGA...GATAAGATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR GCA 90 bp ATCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCAAGGCCTTCTGTGTCACCTCGGTGGAATaGTTGTTGATAACCTTAATC +
Preference number: 4 (lower is better)
Translates to: IIDKSPVPVPMSRTKAFCVTSVE*LLITLI
Trigger: GATTAAGGTTATCAACAAGCATTCCACCGAGGTGAC...ACAGAAGGCCTTGGTTCTCGACATTGGCACTGGCACGGGACTCTTGTCAATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
CDS-3UTR CCA 90 bp GCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGTGTATTGTATCTTCATaGGACATTAGGGGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: ATAGARGQQCKDATRCNTCIVSS*DIRGFL
Trigger: TAGAAAACCCCTAATGTCCCATGAAGATACAATACA...CGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000441236.3
CDS-3UTR CCA 90 bp ATGCCTGAACTCCATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAATTCATACAGATGTCTaGAAACTTCAGCAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: MPELHDDVACVGVKLHCIIHTDV*KLQQAS
Trigger: CGAAGCCTGCTGAAGTTTCCAGACATCTGTATGAAT...TATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATGGAGTTCAGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR TCA 90 bp CTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACCTTAATCTTATCAGCAGCCTTGCCAGTTaGGTTCTTGTGGACAAGTCT +
Preference number: 4 (lower is better)
Translates to: LWTYSHLGGMLVDNLNLISSLAS*VLVDKS
Trigger: AGACTTGTCCACAAGAACTCAACTGGCAAGGCTGCT...GATAAGATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR GCA 90 bp TCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCAAGGCCTTCTGTCAGTATTTTACATTCTTaGAATCTCCTGGTGGTAATC +
Preference number: 4 (lower is better)
Translates to: SLTRVPCQCQCREPRPSVSILHS*NLLVVI
Trigger: GATTACCACCAGGAGATTGCAAGAATGTAAAATACT...GACAGAAGGCCTTGGTTCTCGACATTGGCACTGGCACGGGACTCTTGTCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
CDS-3UTR GCA 90 bp TCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACCTTAATCTTATCAACAGAAAAGCAGCCTTaGCAGTTGAGTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SGPTVTSVECLLITLILSTEKQP*QLSSCG
Trigger: TCCACAAGAACTCAACTGGCAAGGCTGCTTTTCTGT...TGATAAGATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
3UTR CAA 72 bp CCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTaGATAACCTTAATCTTATCACTAAAGCCATTTTTC +
Preference number: 4 (lower is better)
Translates to: PSGPTVTSVECL*ITLILSLKPFF
Trigger: GAAAAATGGCTTTAGTGATAAGATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
3UTR CAA 72 bp TCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTaGTTGATAACCTTAATCTTATCACTAAAGCCATTT +
Preference number: 4 (lower is better)
Translates to: SPSGPTVTSVEC*LITLILSLKPF
Trigger: AAATGGCTTTAGTGATAAGATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS GCA 90 bp TGCAGCCCTCAAGGCCGCCGCGGGAAACCCTCCGCTCGCCTCCGCTaGTACCACTTTTACCGCGGCCAGCACGCGGGGCGGGACCTCGCA +
Preference number: 5 (lower is better)
Translates to: CSPQGRRGKPSARLR*YHFYRGQHAGRDLA
Trigger: TGCGAGGTCCCGCCCCGCGTGCTGGCCGCGGTAAAAGTGGTAGCAGCGGAGGCGAGCGGAGGGTTTCCCGCGGCGGCCTTGAGGGCTGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565745.5
CDS GCA 90 bp GCCAGCCTAGAACCCCGCTCTCCTGCAGGCCCGGGTGTCCCGAGCTaGCCCACGCGGAGGAGTCCAAGTAGGCCCACGCTAGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ASLEPRSPAGPGVPS*PTRRSPSRPTLGSS
Trigger: AGAGGAGCCTAGCGTGGGCCTACTTGGACTCCTCCGCGTGGGGCAGCTCGGGACACCCGGGCCTGCAGGAGAGCGGGGTTCTAGGCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000565983.5
CDS GCA 90 bp AGCAGAGTGAGACTCCGCCGCGGGAAACCCTCCGCTCGCCTCCGCTaGTACCACTTTTACCGCGGCCAGCACGCGGGGCGGGACCTCGCA +
Preference number: 5 (lower is better)
Translates to: SRVRLRRGKPSARLR*YHFYRGQHAGRDLA
Trigger: TGCGAGGTCCCGCCCCGCGTGCTGGCCGCGGTAAAAGTGGTAGCAGCGGAGGCGAGCGGAGGGTTTCCCGCGGCGGAGTCTCACTCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441236.3
ENST00000675132.1
CDS GCA 90 bp CTACTGCGGTCTCTGTGGCTGAGGGGAGGCGCCAGGCACGAGTACTaGGACAGAGCCCCGCGAGTGGCAGGCACCCGGCTGCACTGCAGA +
Preference number: 5 (lower is better)
Translates to: LLRSLWLRGGARHEY*DRAPRVAGTRLHCR
Trigger: TCTGCAGTGCAGCCGGGTGCCTGCCACTCGCGGGGCTCTGTCGCAGTACTCGTGCCTGGCGCCTCCCCTCAGCCACAGAGACCGCAGTAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000565983.5
CDS GCA 90 bp GGGCTCCGGATCCGCCACAGGTCCCTGAACTCCACAACCACAGCGTaGAGCGAGGCTGCCTGGGGCATCACCATGGCACCTGGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GLRIRHRSLNSTTTA*SEAAWGITMAPGPR
Trigger: CCTGGGGCCAGGTGCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCTGTGGTTGTGGAGTTCAGGGACCTGTGGCGGATCCGGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000563608.2
ENST00000567542.5
ENST00000675132.1
CDS CCA 90 bp CTGGGTCGGAGGCTCACCAGGAGCACGAAGACCAATGGCAGGGGATaGGAGGACTTGCCAGGGAGGATGCCCGGGGCCCTGGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LGRRLTRSTKTNGRG*EDLPGRMPGALGLA
Trigger: AGCCAGGCCCAGGGCCCCGGGCATCCTCCCTGGCAAGTCCTCCCATCCCCTGCCATTGGTCTTCGTGCTCCTGGTGAGCCTCCGACCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS CCA 90 bp TGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGGGTaGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAGGGCACGCTGC +
Preference number: 5 (lower is better)
Translates to: CQGSERLRHGYSHSG*GSASLLSLKSRARC
Trigger: GCAGCGTGCCCTGGACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS TCA 90 bp ACTTGCCAGGGAGGATGCCCGGGGCCCTGGGCCTGGCTGGTCGTGTaGAGTGGCGCCAGGTCTAAGACAGGGCACTGGAAGGGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: TCQGGCPGPWAWLVV*SGARSKTGHWKGQA
Trigger: AGCCTGGCCCTTCCAGTGCCCTGTCTTAGACCTGGCGCCACTTCACACGACCAGCCAGGCCCAGGGCCCCGGGCATCCTCCCTGGCAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS GCA 90 bp CCGCCACAGGTCCCTGAACTCCACAACCACAGCGTGCAGCGAGGCTaGCTGGGGCATCACCATGGCACCTGGCCCCAGGTGCTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: PPQVPELHNHSVQRG*LGHHHGTWPQVLVH
Trigger: GTGGACCAGCACCTGGGGCCAGGTGCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCTGTGGTTGTGGAGTTCAGGGACCTGTGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000563608.2
ENST00000567542.5
ENST00000675132.1
CDS CCA 90 bp ACTCCACAACCACAGCGTGCAGCGAGGCTGCCTGGGGCATCACCATaGCACCTGGCCCCAGGTGCTGGTCCACAGCGGTCCGCACGTACC +
Preference number: 5 (lower is better)
Translates to: TPQPQRAARLPGASP*HLAPGAGPQRSART
Trigger: GGTACGTGCGGACCGCTGTGGACCAGCACCTGGGGCCAGGTGCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCTGTGGTTGTGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000563608.2
ENST00000565356.5
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS GCA 90 bp CCCGGTGCCTGGCGGCAGGCTGGGGGCACCTGCATCCAGGAGGGATaGAGAAAGCTACCTGGAGGAGGGGAGGTGACGGTCAAATGGGAG +
Preference number: 5 (lower is better)
Translates to: PGAWRQAGGTCIQEG*RKLPGGGEVTVKWE
Trigger: CTCCCATTTGACCGTCACCTCCCCTCCTCCAGGTAGCTTTCTGCATCCCTCCTGGATGCAGGTGCCCCCAGCCTGCCGCCAGGCACCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS CCA 90 bp CACAGGTCCCTGAACTCCACAACCACAGCGTGCAGCGAGGCTGCCTaGGGCATCACCATGGCACCTGGCCCCAGGTGCTGGTCCACAGCG +
Preference number: 5 (lower is better)
Translates to: HRSLNSTTTACSEAA*GITMAPGPRCWSTA
Trigger: CGCTGTGGACCAGCACCTGGGGCCAGGTGCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCTGTGGTTGTGGAGTTCAGGGACCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000563608.2
ENST00000567542.5
ENST00000675132.1
CDS CCA 90 bp CCGTCTCCCTCCCCAGGCTCTGAGCACCACAAGAGCAGGGACTGGTaGCCCAGCATCCCCCAGCAGTGGGCCAGTGCCGTGACCAGATGT +
Preference number: 5 (lower is better)
Translates to: PSPSPGSEHHKSRDW*PSIPQQWASAVTRC
Trigger: ACATCTGGTCACGGCACTGGCCCACTGCTGGGGGATGCTGGGCCACCAGTCCCTGCTCTTGTGGTGCTCAGAGCCTGGGGAGGGAGACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566708.1
CDS CCA 90 bp TCTCCGTCTCCCTCCCCAGGCTCTGAGCACCACAAGAGCAGGGACTaGTGGCCCAGCATCCCCCAGCAGTGGGCCAGTGCCGTGACCAGA +
Preference number: 5 (lower is better)
Translates to: SPSPSPGSEHHKSRD*WPSIPQQWASAVTR
Trigger: TCTGGTCACGGCACTGGCCCACTGCTGGGGGATGCTGGGCCACCAGTCCCTGCTCTTGTGGTGCTCAGAGCCTGGGGAGGGAGACGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566708.1
CDS CCA 90 bp CTGCACACCCTGAACTCCACAACCACAGCGTGCAGCGAGGCTGCCTaGGGCATCACCATGGCACCTGGCCCCAGGTGCTGGTCCACAGCG +
Preference number: 5 (lower is better)
Translates to: LHTLNSTTTACSEAA*GITMAPGPRCWSTA
Trigger: CGCTGTGGACCAGCACCTGGGGCCAGGTGCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCTGTGGTTGTGGAGTTCAGGGTGTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS CCA 90 bp ATGGGAGGACTTGCCAGGGAGGATGCCCGGGGCCCTGGGCCTGGCTaGTCGTGTGAAGTGGCGCCAGGTCTAAGACAGGGCACTGGAAGG +
Preference number: 5 (lower is better)
Translates to: MGGLAREDARGPGPG*SCEVAPGLRQGTGR
Trigger: CCTTCCAGTGCCCTGTCTTAGACCTGGCGCCACTTCACACGACCAGCCAGGCCCAGGGCCCCGGGCATCCTCCCTGGCAAGTCCTCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS GCA 90 bp TTCCCTGCACACCCTGAACTCCACAACCACAGCGTGCAGCGAGGCTaGCTGGGGCATCACCATGGCACCTGGCCCCAGGTGCTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: FPAHPELHNHSVQRG*LGHHHGTWPQVLVH
Trigger: GTGGACCAGCACCTGGGGCCAGGTGCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCTGTGGTTGTGGAGTTCAGGGTGTGCAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS CCA 90 bp AACCACAGCGTGCAGCGAGGCTGCCTGGGGCATCACCATGGCACCTaGCCCCAGGTGCTGGTCCACAGCGGTCCGCACGTACCAGAAGTA +
Preference number: 5 (lower is better)
Translates to: NHSVQRGCLGHHHGT*PQVLVHSGPHVPEV
Trigger: TACTTCTGGTACGTGCGGACCGCTGTGGACCAGCACCTGGGGCCAGGTGCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCTGTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000563608.2
ENST00000565356.5
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CAA 90 bp CCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCGACCCCGTGGTCGGATaGGCCCGACTGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: PGPSQGLQAPETQPQLSIDPVVG*ARLQKI
Trigger: GATCTTCTGCAGTCGGGCCAATCCGACCACGGGGTC...GATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp AGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCCACGGGGACCCCGTGGTCGGATaGGCCCGACTGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: RDPEILESETDRTGSRHGDPVVG*ARLQKI
Trigger: GATCTTCTGCAGTCGGGCCAATCCGACCACGGGGTC...CCCGTGGCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS TCA 90 bp AGGGCAGCGCCCCCTCCCCGATCAGCTCTGTGTCAAACAACTCTGTaGCCAGGATGTTGGCACGGCATGGCATGTCACCCTCCGCCGCGG +
Preference number: 5 (lower is better)
Translates to: RAAPPPRSALCQTTL*PGCWHGMACHPPPR
Trigger: CCGCGGCGGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGACACAGAGCTGATCGGGGAGGGGGCGCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564050.6
CDS GCA 90 bp CTTCCTGAGCTTCTGAGCTCCACGGTGCCCTCGGCACACAGGGGCTaGAGGGGCACCGGCTGCTGGAAGTCAAAGGTCAGGATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LPELLSSTVPSAHRG*RGTGCWKSKVRICQ
Trigger: CTGGCAGATCCTGACCTTTGACTTCCAGCAGCCGGTGCCCCTGCAGCCCCTGTGTGCCGAGGGCACCGTGGAGCTCAGAAGCTCAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS CCA 90 bp GCAGGCTGGGGGCACCTGCATCCAGGAGGGATGCAGAAAGCTACCTaGAGGAGGGGAGGTGACGGTCAAATGGGAGCCGGCAGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: AGWGHLHPGGMQKAT*RRGGDGQMGAGRRR
Trigger: CCTTCTCCTGCCGGCTCCCATTTGACCGTCACCTCCCCTCCTCCAGGTAGCTTTCTGCATCCCTCCTGGATGCAGGTGCCCCCAGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS-3UTR CAA 90 bp GCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCGACCCCGTGGTCGGATaGGCCCGACTGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: AWVLPQRVGLSFPALPEVDPVVG*ARLQKI
Trigger: GATCTTCTGCAGTCGGGCCAATCCGACCACGGGGTC...GACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CAA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGTGGATGGGAAATAGCTaGTTCCACGACCACATCCTC +
Preference number: 5 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPWMGNS*FHDHIL
Trigger: GAGGATGTGGTCGTGGAACAAGCTATTTCCCATCCA...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGGGGGCCATGGTGCACTaGATCTTCCCCTCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: VLSVHSGVRWYSIHSTAAGAMVH*IFPSGS
Trigger: GGACCCTGAGGGGAAGATCAAGTGCACCATGGCCCC...CGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CAA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGAGAGATGTCTCTGTGTaGGAGCATTCTCAGCACCTC +
Preference number: 5 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPRDVSV*EHSQHL
Trigger: GAGGTGCTGAGAATGCTCCAACACAGAGACATCTCT...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS GCA 90 bp CCCACGCTAGGCTCCTCTGCCGAAACCCTGGTGCCAAGGACACCATaGTCGCTGCACACAGAACCCCAAAGCGACCCCACCTTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: PTLGSSAETLVPRTP*SLHTEPQSDPTFPA
Trigger: TGCTGGGAAGGTGGGGTCGCTTTGGGGTTCTGTGTGCAGCGAGCATGGTGTCCTTGGCACCAGGGTTTCGGCAGAGGAGCCTAGCGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565983.5
ENST00000569571.5
CDS-3UTR CAA 90 bp GGTGCGCCAGGGCAGCTCTCCACGTCAACGGGAGGGACGATGACCTGCTCTCCGTCTGTGACCAGGATGTaGGCACGGCATGGCATGTCA +
Preference number: 5 (lower is better)
Translates to: GAPGQLSTSTGGTMTCSPSVTRM*ARHGMS
Trigger: TGACATGCCATGCCGTGCCAACATCCTGGTCACAGA...CGGAGAGCAGGTCATCGTCCCTCCCGTTGACGTGGAGAGCTGCCCTGGCGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR CAA 90 bp GACAGGACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCTGGATGGGAAATAGCTaGTTCCACGACCACATCCTC +
Preference number: 5 (lower is better)
Translates to: DRTGSRHGDCSPRAAWTTWMGNS*FHDHIL
Trigger: GAGGATGTGGTCGTGGAACAAGCTATTTCCCATCCA...GGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGGGGCCATGGTGCACTaGATCTTCCCCTCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: VREARPRHLLTFLVKRRWGAMVH*IFPSGS
Trigger: GGACCCTGAGGGGAAGATCAAGTGCACCATGGCCCC...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GACAGGACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCTCAGGCCACTTTATaGCTCAAGAGTGGTCAGTCT +
Preference number: 5 (lower is better)
Translates to: DRTGSRHGDCSPRAAWTTPQATL*LKSGQS
Trigger: AGACTGACCACTCTTGAGCAATAAAGTGGCCTGAGG...GGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS CCA 90 bp TGCAGAGACAGGCCGGCAGCTAGACAGAGGTACCGCTCCCCGGCTTaGCTCCCACTGACTGCAGTCACAAGGGGTGTGCGTTCTCCCATA +
Preference number: 5 (lower is better)
Translates to: CRDRPAARQRYRSPA*LPLTAVTRGVRSPI
Trigger: TATGGGAGAACGCACACCCCTTGTGACTGCAGTCAGTGGGAGCCAAGCCGGGGAGCGGTACCTCTGTCTAGCTGCCGGCCTGTCTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS-3UTR CAA 90 bp GTGTGTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGGGGGCCATGGTGCACTaGATCTTCCCCTCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: VCERSKATAPTDLPGEAAGAMVH*IFPSGS
Trigger: GGACCCTGAGGGGAAGATCAAGTGCACCATGGCCCC...CGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCACACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS TCA 90 bp TCCTGGTCATTGATCTCTCCAAACCGAGGCCGGTTCCAGAGCAGGTaGGCCTGGCAGTCACACACGGGGCGCATCTGGCGGACTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SWSLISPNRGRFQSR*AWQSHTGRIWRTLS
Trigger: TGAGAGAGTCCGCCAGATGCGCCCCGTGTGTGACTGCCAGGCTCACCTGCTCTGGAACCGGCCTCGGTTTGGAGAGATCAATGACCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000564050.6
ENST00000565356.5
ENST00000566687.1
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS CCA 90 bp GGGATGTGGCCAGACTCAGATCTACAAGTTCATGTGGGCTCCGTGTaGAGGACGGCCAGAGCAGGAGGGGCTCAAACCAGGACGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GMWPDSDLQVHVGSV*RTARAGGAQTRTAA
Trigger: TGCTGCCGTCCTGGTTTGAGCCCCTCCTGCTCTGGCCGTCCTCCACACGGAGCCCACATGAACTTGTAGATCTGAGTCTGGCCACATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS-3UTR CAA 90 bp CCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCACAGGACCACTCTGGTaGGCGTGTAGTGAATACACG +
Preference number: 5 (lower is better)
Translates to: PGPSQGLQAPETQPQLSITGPLW*ACSEYT
Trigger: CGTGTATTCACTACACGCCAACCAGAGTGGTCCTGT...GATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR CAA 90 bp AGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACAGTCACCTCGGTGGACCCCGTGGTCGGATaGGCCCGACTGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: RMLARHGMSPSGPTVTSVDPVVG*ARLQKI
Trigger: GATCTTCTGCAGTCGGGCCAATCCGACCACGGGGTC...CACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CAA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCTCTGTGACCAGGATGTaGGCACGGCATGGCATGTCA +
Preference number: 5 (lower is better)
Translates to: ERSKATAPTDLPGEAALGSVTRM*ARHGMS
Trigger: TGACATGCCATGCCGTGCCAACATCCTGGTCACAGA...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GGCCTCTCAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAGAGCTACTGACTTGCTaGCTGAAGTCTATGCTGAAC +
Preference number: 5 (lower is better)
Translates to: GLSARAQPGSSSPRDPATELLTC*LKSMLN
Trigger: GTTCAGCATAGACTTCAGCAAGCAAGTCAGTAGCTC...TGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTGAGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCACCACAGGCTCCTCTaGTGGCAGGAAGTACACACA +
Preference number: 5 (lower is better)
Translates to: AWVLPQRVGLSFPALPEVHHRLL*WQEVHT
Trigger: TGTGTGTACTTCCTGCCACAAGAGGAGCCTGTGGTG...GACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS GCA 90 bp GGGCCACTCTGCAGGTGTGGTGTGGGGAGCCAGCTAGGGCATTCCTaGAGTGGGGATGTGGCCAGACTCAGATCTACAAGTTCATGTGGG +
Preference number: 5 (lower is better)
Translates to: GPLCRCGVGSQLGHS*SGDVARLRSTSSCG
Trigger: CCCACATGAACTTGTAGATCTGAGTCTGGCCACATCCCCACTGCAGGAATGCCCTAGCTGGCTCCCCACACCACACCTGCAGAGTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS CCA 90 bp AGTGTTCATCCTCCTCCAGCCACTCCACAGACCCCGTGGTCGGATTaGCCCGACTGCAGAAGATCTTCATGGTGCCCACTAGCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: SVHPPPATPQTPWSD*PDCRRSSWCPLAPQ
Trigger: CTGGGGAGCTAGTGGGCACCATGAAGATCTTCTGCAGTCGGGCCAATCCGACCACGGGGTCTGTGGAGTGGCTGGAGGAGGATGAACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000561806.5
ENST00000562050.5
ENST00000562381.7
ENST00000562456.1
ENST00000563562.5
ENST00000565356.5
ENST00000565745.5
ENST00000566341.5
ENST00000568975.5
ENST00000569047.7
ENST00000569571.5
ENST00000675132.1
CDS CCA 90 bp GTTCTAGAGTCACAGCTGGCAGTGGCAGTGCAAGTCAGGGCCCTATaGCCTTTCTGGCCCCTGGCAGAACAGCTCTGGCTGAGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: VLESQLAVAVQVRAL*PFWPLAEQLWLSWA
Trigger: TGCCCAACTCAGCCAGAGCTGTTCTGCCAGGGGCCAGAAAGGCCATAGGGCCCTGACTTGCACTGCCACTGCCAGCTGTGACTCTAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS CCA 90 bp TCCACGACCACATCCTCCCGGACTCCACCAGCTGTGCATAGACGGTaGCTCTGTGGGGCACGGCCTCACAATTTTCCTCGATGGCATAGC +
Preference number: 5 (lower is better)
Translates to: STTTSSRTPPAVHRR*LCGARPHNFPRWHS
Trigger: GCTATGCCATCGAGGAAAATTGTGAGGCCGTGCCCCACAGAGCCACCGTCTATGCACAGCTGGTGGAGTCCGGGAGGATGTGGTCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS-3UTR CAA 90 bp CCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCAAGCAGCCTTGCCAGTaGAGTTCTTGTGGACAAGTC +
Preference number: 5 (lower is better)
Translates to: PGPSQGLQAPETQPQLSIKQPCQ*SSCGQV
Trigger: GACTTGTCCACAAGAACTCAACTGGCAAGGCTGCTT...GATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp CCGCCATCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCAAGGCCTGACCCCGTGGTCGGATaGGCCCGACTGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: PPSLTRVPCQCQCREPRPDPVVG*ARLQKI
Trigger: GATCTTCTGCAGTCGGGCCAATCCGACCACGGGGTC...AGGCCTTGGTTCTCGACATTGGCACTGGCACGGGACTCTTGTCAATGATGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
CDS-3UTR CAA 90 bp ACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCCCACCGACCTCGGTGGAATGCTaGTTGATAACCTTAATCTTA +
Preference number: 5 (lower is better)
Translates to: TGSRHGDCSPRAAWTTPPTSVEC*LITLIL
Trigger: TAAGATTAAGGTTATCAACAAGCATTCCACCGAGGT...CGGTGGGGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGTCTGTGACCAGGATGTaGGCACGGCATGGCATGTCA +
Preference number: 5 (lower is better)
Translates to: VREARPRHLLTFLVKRRWSVTRM*ARHGMS
Trigger: TGACATGCCATGCCGTGCCAACATCCTGGTCACAGA...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp AGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCCACGGGTGGATGGGAAATAGCTaGTTCCACGACCACATCCTC +
Preference number: 5 (lower is better)
Translates to: RDPEILESETDRTGSRHGWMGNS*FHDHIL
Trigger: GAGGATGTGGTCGTGGAACAAGCTATTTCCCATCCA...CCCGTGGCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp CACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGGGGCCATGGTGCACTaGATCTTCCCCTCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: HSWSQRPAVQRCNKMQHGGAMVH*IFPSGS
Trigger: GGACCCTGAGGGGAAGATCAAGTGCACCATGGCCCC...GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCCACCACAGGCTCCTCTaGTGGCAGGAAGTACACACA +
Preference number: 5 (lower is better)
Translates to: ARVFKPQRPSHNSASPPSHHRLL*WQEVHT
Trigger: TGTGTGTACTTCCTGCCACAAGAGGAGCCTGTGGTG...GGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGCACCACAGGCTCCTCTaGTGGCAGGAAGTACACACA +
Preference number: 5 (lower is better)
Translates to: VREARPRHLLTFLVKRRWHHRLL*WQEVHT
Trigger: TGTGTGTACTTCCTGCCACAAGAGGAGCCTGTGGTG...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp AGGCTCCAGGAGGCCAGTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATGTTCTGTCCTGGTCATaGATCTCTCCAAACCGAGGC +
Preference number: 5 (lower is better)
Translates to: RLQEASAERALRGQVVLHVLSWS*ISPNRG
Trigger: GCCTCGGTTTGGAGAGATCAATGACCAGGACAGAAC...ATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCACTGGCCTCCTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CAA 90 bp GGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCGGGTGGGCCTGTAGGTCCTCATTaGTTAATAATTCCGGCCGTT +
Preference number: 5 (lower is better)
Translates to: GSARARRGCGMGTPTAGGPVGPH*LIIPAV
Trigger: AACGGCCGGAATTATTAACAAATGAGGACCTACAGG...CCCACCCGCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CAA 90 bp GGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAGGCCTCAGGCCACTTTATaGCTCAAGAGTGGTCAGTCT +
Preference number: 5 (lower is better)
Translates to: GYSHSGWGSASLLSLKSRPQATL*LKSGQS
Trigger: AGACTGACCACTCTTGAGCAATAAAGTGGCCTGAGG...CCTGGACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS TCA 90 bp CGGTCCTCAGAGCCTGGACGTATCGATCAGTTCTGTCCTGGTCATTaGTCTCTCCAAACCGAGGCCGGTTCCAGAGCAGGTGAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: RSSEPGRIDQFCPGH*SLQTEAGSRAGEPG
Trigger: GCCAGGCTCACCTGCTCTGGAACCGGCCTCGGTTTGGAGAGATCAATGACCAGGACAGAACTGATCGATACGTCCAGGCTCTGAGGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000565356.5
ENST00000566687.1
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS GCA 90 bp GGGGGACCAAGAGGGCGACTGGAAGGTAGGAGGACAGAGCAGGCTTaGTCCTTTCTGCATGCTGCTGTTCTCATCAGGGTCCTCTCGGTA +
Preference number: 5 (lower is better)
Translates to: GGPRGRLEGRRTEQA*SFLHAAVLIRVLSV
Trigger: TACCGAGAGGACCCTGATGAGAACAGCAGCATGCAGAAAGGAGCAAGCCTGCTCTGTCCTCCTACCTTCCAGTCGCCCTCTTGGTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS CCA 90 bp AAGTCGGCACCAGCTCCTTGGGCCCCTCAGAGCTGCAGCCGTACTTaGACAGTGGTCCACAGGATCTCTCCTCAATGCTTGTGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: KSAPAPWAPQSCSRT*TVVHRISPQCLWLL
Trigger: CAGAAGCCACAAGCATTGAGGAGAGATCCTGTGGACCACTGTCCAAGTACGGCTGCAGCTCTGAGGGGCCCAAGGAGCTGGTGCCGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565761.1
CDS CCA 90 bp TTCCTGCAGTGGGGATGTGGCCAGACTCAGATCTACAAGTTCATGTaGGCTCCGTGTGGAGGACGGCCAGAGCAGGAGGGGCTCAAACCA +
Preference number: 5 (lower is better)
Translates to: FLQWGCGQTQIYKFM*APCGGRPEQEGLKP
Trigger: TGGTTTGAGCCCCTCCTGCTCTGGCCGTCCTCCACACGGAGCCCACATGAACTTGTAGATCTGAGTCTGGCCACATCCCCACTGCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS CCA 90 bp ACTCTGCAGGTGTGGTGTGGGGAGCCAGCTAGGGCATTCCTGCAGTaGGGATGTGGCCAGACTCAGATCTACAAGTTCATGTGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: TLQVWCGEPARAFLQ*GCGQTQIYKFMWAP
Trigger: CGGAGCCCACATGAACTTGTAGATCTGAGTCTGGCCACATCCCCACTGCAGGAATGCCCTAGCTGGCTCCCCACACCACACCTGCAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS-3UTR CAA 90 bp AGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCCACGGGTTGCCAGTTGAGTTCTaGTGGACAAGTCTGACTGTC +
Preference number: 5 (lower is better)
Translates to: RDPEILESETDRTGSRHGLPVEF*WTSLTV
Trigger: GACAGTCAGACTTGTCCACAAGAACTCAACTGGCAA...CCCGTGGCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GTGCTGAGCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGCACAGAAAAGCAGCCTaGCCAGTTGAGTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: VLSVHSGVRWYSIHSTAAHRKAA*PVEFLW
Trigger: CCACAAGAACTCAACTGGCAAGGCTGCTTTTCTGTG...CGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGCTCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CAA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACTCTGTGACCAGGATGTaGGCACGGCATGGCATGTCA +
Preference number: 5 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNSVTRM*ARHGMS
Trigger: TGACATGCCATGCCGTGCCAACATCCTGGTCACAGA...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GCGTGCACTCCGGGGTCAGGTGGTACTCCATCCATAGCACCGCTGCGTGGCTCTTGGATGGGAAATAGCTaGTTCCACGACCACATCCTC +
Preference number: 5 (lower is better)
Translates to: ACTPGSGGTPSIAPLRGSWMGNS*FHDHIL
Trigger: GAGGATGTGGTCGTGGAACAAGCTATTTCCCATCCA...AGAGCCACGCAGCGGTGCTATGGATGGAGTACCACCTGACCCCGGAGTGCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CAA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGTTCTGTCCTGGTCATaGATCTCTCCAAACCGAGGC +
Preference number: 5 (lower is better)
Translates to: VREARPRHLLTFLVKRRWVLSWS*ISPNRG
Trigger: GCCTCGGTTTGGAGAGATCAATGACCAGGACAGAAC...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GACAGGACAGGCTCCCGCCACGGGGACTGCTCGCCAAGGGCGGCGTGGACAACCTCCAAGTGGTTAGCCTaGAAGATTTTTCTCAACAGT +
Preference number: 5 (lower is better)
Translates to: DRTGSRHGDCSPRAAWTTSKWLA*KIFLNS
Trigger: ACTGTTGAGAAAAATCTTCAAGGCTAACCACTTGGA...GGTTGTCCACGCCGCCCTTGGCGAGCAGTCCCCGTGGCGGGAGCCTGTCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS TCA 90 bp GGCATGTCACCCTCTCGATGGCATAGCAGAAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGA +
Preference number: 5 (lower is better)
Translates to: GMSPSRWHSRSRHLL*PPSLTRVPCQCQCR
Trigger: TCGACATTGGCACTGGCACGGGACTCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACTTCTGCTATGCCATCGAGAGGGTGACATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563562.5
CDS GCA 90 bp GATTTAGAAGATGCTGCTGAGGACCACGAAGTGTGGAAGGGAACCTaGAGGTGCTGGGGACGGAGGCGACCTTTCTGCCCTGTAGGTCCT +
Preference number: 5 (lower is better)
Translates to: DLEDAAEDHEVWKGT*RCWGRRRPFCPVGP
Trigger: AGGACCTACAGGGCAGAAAGGTCGCCTCCGTCCCCAGCACCTGCAGGTTCCCTTCCACACTTCGTGGTCCTCAGCAGCATCTTCTAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566708.1
CDS CCA 90 bp CACCAGCTCCTTGGGCCCCTCAGAGCTGCAGCCGTACTTGGACAGTaGTCCACAGGATCTCTCCTCAATGCTTGTGGCTTCTGGAAATCC +
Preference number: 5 (lower is better)
Translates to: HQLLGPLRAAAVLGQ*STGSLLNACGFWKS
Trigger: GGATTTCCAGAAGCCACAAGCATTGAGGAGAGATCCTGTGGACCACTGTCCAAGTACGGCTGCAGCTCTGAGGGGCCCAAGGAGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565761.1
CDS-3UTR CAA 90 bp AAAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGAAGCAGCCTTGCCAGTaGAGTTCTTGTGGACAAGTC +
Preference number: 5 (lower is better)
Translates to: KGQDLPGLGEAAAWVLPQKQPCQ*SSCGQV
Trigger: GACTTGTCCACAAGAACTCAACTGGCAAGGCTGCTT...CTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CAA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCCACAGAAAAGCAGCCTaGCCAGTTGAGTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: GVLHLFQRQAGARPQGHAHRKAA*PVEFLW
Trigger: CCACAAGAACTCAACTGGCAAGGCTGCTTTTCTGTG...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGGACCCCGTGGTCGGATaGGCCCGACTGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGDPVVG*ARLQKI
Trigger: GATCTTCTGCAGTCGGGCCAATCCGACCACGGGGTC...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GCTCTCCACGTCAACGGGAGGGACGATGACCTGCTCTCCGAGGCTGGTCTGCACGAGCTACTGACTTGCTaGCTGAAGTCTATGCTGAAC +
Preference number: 5 (lower is better)
Translates to: ALHVNGRDDDLLSEAGLHELLTC*LKSMLN
Trigger: GTTCAGCATAGACTTCAGCAAGCAAGTCAGTAGCTC...GTGCAGACCAGCCTCGGAGAGCAGGTCATCGTCCCTCCCGTTGACGTGGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS TCA 90 bp GTACCATACGCAGTAGTCATCGTGGTGGGCTACCAGATAGAGCGCTaGGCCCTGCACCACAGGCTCCTCTTGTGGCAGGAAGTACACACA +
Preference number: 5 (lower is better)
Translates to: VPYAVVIVVGYQIER*ALHHRLLLWQEVHT
Trigger: TGTGTGTACTTCCTGCCACAAGAGGAGCCTGTGGTGCAGGGCTCAGCGCTCTATCTGGTAGCCCACCACGATGACTACTGCGTATGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000564050.6
ENST00000565356.5
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS TCA 90 bp GGGAATGGCTTACCTCGATGGCATAGCAGAAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGA +
Preference number: 5 (lower is better)
Translates to: GNGLPRWHSRSRHLL*PPSLTRVPCQCQCR
Trigger: TCGACATTGGCACTGGCACGGGACTCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACTTCTGCTATGCCATCGAGGTAAGCCATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562456.1
CDS TCA 90 bp CCTCCAAGCTTACCTCGATGGCATAGCAGAAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGA +
Preference number: 5 (lower is better)
Translates to: PPSLPRWHSRSRHLL*PPSLTRVPCQCQCR
Trigger: TCGACATTGGCACTGGCACGGGACTCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACTTCTGCTATGCCATCGAGGTAAGCTTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563443.1
CDS TCA 90 bp CCAGCAGTGGGCCAGTGCCGTGACCAGATGTTCTGTGAACATTTGTaGGTAAATGAACACGTGCACAGCGAGGAGCCTGAACGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: PAVGQCRDQMFCEHL*VNEHVHSEEPERPR
Trigger: CCTCGGCCGTTCAGGCTCCTCGCTGTGCACGTGTTCATTTACTCACAAATGTTCACAGAACATCTGGTCACGGCACTGGCCCACTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566708.1
CDS TCA 90 bp GGCCTGCTTCAGCTCCCAGGAGGGTTCAGGAAAATGGTGCATCGGTaGCCACAGGAAGTAAGCTCCCATCTTCCTGAGCTTCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GLLQLPGGFRKMVHR*PQEVSSHLPELLSS
Trigger: GGAGCTCAGAAGCTCAGGAAGATGGGAGCTTACTTCCTGTGGTCACCGATGCACCATTTTCCTGAACCCTCCTGGGAGCTGAAGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS CCA 90 bp AACCAGCTCCTTGGGCCCCTCAGAGCTGCAGCCGTACTTGGACAGTaGTCCACAGGATCTCTCCTCAATGCTTGTGGCTTCTGGAAATCC +
Preference number: 5 (lower is better)
Translates to: NQLLGPLRAAAVLGQ*STGSLLNACGFWKS
Trigger: GGATTTCCAGAAGCCACAAGCATTGAGGAGAGATCCTGTGGACCACTGTCCAAGTACGGCTGCAGCTCTGAGGGGCCCAAGGAGCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS-3UTR CAA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCTTGCCAGTTGAGTTCTaGTGGACAAGTCTGACTGTC +
Preference number: 5 (lower is better)
Translates to: GVLHLFQRQAGARPQGHALPVEF*WTSLTV
Trigger: GACAGTCAGACTTGTCCACAAGAACTCAACTGGCAA...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp ACAAGATGCAACACGGCGCAGTCTTTCCCATCCCTGAGGCCGAGCAGCTCCCAGCACAGAAAAGCAGCCTaGCCAGTTGAGTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: TRCNTAQSFPSLRPSSSQHRKAA*PVEFLW
Trigger: CCACAAGAACTCAACTGGCAAGGCTGCTTTTCTGTG...CTGGGAGCTGCTCGGCCTCAGGGATGGGAAAGACTGCGCCGTGTTGCATCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp CATGGCATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAGACCCCGTGGTCGGATaGGCCCGACTGCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: HGMSPSGPTVTSVECLLIDPVVG*ARLQKI
Trigger: GATCTTCTGCAGTCGGGCCAATCCGACCACGGGGTC...TATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CAA 90 bp AAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGCCTGCATAAGATGACCTaGCAATCTCCTGGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: KVRICQGSERLRHGYSHSLHKMT*QSPGGN
Trigger: ATTACCACCAGGAGATTGCAAGGTCATCTTATGCAG...GCTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CAA 90 bp AAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCTCCCGCGAGCTACTGACTTGCTaGCTGAAGTCTATGCTGAAC +
Preference number: 5 (lower is better)
Translates to: KSRDPEILESETDRTGSRELLTC*LKSMLN
Trigger: GTTCAGCATAGACTTCAGCAAGCAAGTCAGTAGCTC...GCGGGAGCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp CTGAAGTCTATGCTGAACATGGGCAGCACATCGCTGAGGACTGTAAAGTCGGCTGGGGCCATGGTGCACTaGATCTTCCCCTCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: LKSMLNMGSTSLRTVKSAGAMVH*IFPSGS
Trigger: GGACCCTGAGGGGAAGATCAAGTGCACCATGGCCCC...AGCCGACTTTACAGTCCTCAGCGATGTGCTGCCCATGTTCAGCATAGACTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR CAA 90 bp CAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTTGTGTTCTGTCCTGGTCATaGATCTCTCCAAACCGAGGC +
Preference number: 5 (lower is better)
Translates to: QPLSWACISGTALGQLPCVLSWS*ISPNRG
Trigger: GCCTCGGTTTGGAGAGATCAATGACCAGGACAGAAC...ACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp CAGCCCGGGCCCAGCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCTCCAAGTGGTTAGCCTaGAAGATTTTTCTCAACAGT +
Preference number: 5 (lower is better)
Translates to: QPGPSQGLQAPETQPQLSSKWLA*KIFLNS
Trigger: ACTGTTGAGAAAAATCTTCAAGGCTAACCACTTGGA...GCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGCTGGGCCCGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS TCA 90 bp TGGTGGGCAGCTCTATGCAAACCTACCCCAACAGGCCACGGGAGCTaGGAGGCTGAGGAAAGACTGGCAAATCCAGCTTCTCAGAAAGAC +
Preference number: 5 (lower is better)
Translates to: WWAALCKPTPTGHGS*EAEERLANPASQKD
Trigger: GTCTTTCTGAGAAGCTGGATTTGCCAGTCTTTCCTCAGCCTCTCAGCTCCCGTGGCCTGTTGGGGTAGGTTTGCATAGAGCTGCCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563443.1
CDS CCA 90 bp GGTAATCATAGTGTTCATCCTCCTCCAGCCACTCCACAGACCCCGTaGTCGGATTGGCCCGACTGCAGAAGATCTTCATGGTGCCCACTA +
Preference number: 5 (lower is better)
Translates to: GNHSVHPPPATPQTP*SDWPDCRRSSWCPL
Trigger: TAGTGGGCACCATGAAGATCTTCTGCAGTCGGGCCAATCCGACCACGGGGTCTGTGGAGTGGCTGGAGGAGGATGAACACTATGATTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000561806.5
ENST00000562050.5
ENST00000562381.7
ENST00000562456.1
ENST00000563562.5
ENST00000565356.5
ENST00000565745.5
ENST00000566341.5
ENST00000568975.5
ENST00000569047.7
ENST00000569571.5
ENST00000675132.1
CDS-3UTR CAA 90 bp GTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACAGTCACCAAGCAGCCTTGCCAGTaGAGTTCTTGTGGACAAGTC +
Preference number: 5 (lower is better)
Translates to: VTRMLARHGMSPSGPTVTKQPCQ*SSCGQV
Trigger: GACTTGTCCACAAGAACTCAACTGGCAAGGCTGCTT...GGTGACTGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CAA 90 bp GGTGTTCTCCACTTATTTCAGCGACAAGCTGGGGCCAGGCCTCAGGGGCACGCCGGCAGCCCGGATACCTaGGTAGTATTTTACATTTCT +
Preference number: 5 (lower is better)
Translates to: GVLHLFQRQAGARPQGHAGSPDT*VVFYIS
Trigger: AGAAATGTAAAATACTACCAAGGTATCCGGGCTGCC...GGCGTGCCCCTGAGGCCTGGCCCCAGCTTGTCGCTGAAATAAGTGGAGAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp CATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAGCTGACAGTCCGTCTGTGACCAGGATGTaGGCACGGCATGGCATGTCA +
Preference number: 5 (lower is better)
Translates to: HDDVACVGVKLHCIADSPSVTRM*ARHGMS
Trigger: TGACATGCCATGCCGTGCCAACATCCTGGTCACAGA...CGGACTGTCAGCTATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CAA 90 bp CGGCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCCAAGTGGTTAGCCTaGAAGATTTTTCTCAACAGT +
Preference number: 5 (lower is better)
Translates to: RHGYSHSGWGSASLLSLKSKWLA*KIFLNS
Trigger: ACTGTTGAGAAAAATCTTCAAGGCTAACCACTTGGA...CTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CAA 90 bp CAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTTGTAGAGATGTCTCTGTGTaGGAGCATTCTCAGCACCTC +
Preference number: 5 (lower is better)
Translates to: QPLSWACISGTALGQLPCRDVSV*EHSQHL
Trigger: GAGGTGCTGAGAATGCTCCAACACAGAGACATCTCT...ACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS TCA 90 bp TGTCTGGAAACTTCAGCAGGCTTCGGTGCTTCCAAAAGGTTCAAATaGGCCTCACAAGTTCATCTAGGTGCAGCCCTCAAGGCCGCCGCG +
Preference number: 5 (lower is better)
Translates to: CLETSAGFGASKRFK*ASQVHLGAALKAAA
Trigger: CGCGGCGGCCTTGAGGGCTGCACCTAGATGAACTTGTGAGGCTCATTTGAACCTTTTGGAAGCACCGAAGCCTGCTGAAGTTTCCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565745.5
CDS TCA 90 bp CCTCACAATTTTCCTCGATGGCATAGCAGAAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGA +
Preference number: 5 (lower is better)
Translates to: PHNFPRWHSRSRHLL*PPSLTRVPCQCQCR
Trigger: TCGACATTGGCACTGGCACGGGACTCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACTTCTGCTATGCCATCGAGGAAAATTGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS-3UTR CAA 90 bp CACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCAAGCAGCCTTGCCAGTaGAGTTCTTGTGGACAAGTC +
Preference number: 5 (lower is better)
Translates to: HSWSQRPAVQRCNKMQHGKQPCQ*SSCGQV
Trigger: GACTTGTCCACAAGAACTCAACTGGCAAGGCTGCTT...GCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAAAGCAGCCTTGCCAGTaGAGTTCTTGTGGACAAGTC +
Preference number: 5 (lower is better)
Translates to: PETQPQLSISTLLAEARRKQPCQ*SSCGQV
Trigger: GACTTGTCCACAAGAACTCAACTGGCAAGGCTGCTT...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp CCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGACACAGAAAAGCAGCCTaGCCAGTTGAGTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: PETQPQLSISTLLAEARRHRKAA*PVEFLW
Trigger: CCACAAGAACTCAACTGGCAAGGCTGCTTTTCTGTG...TCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp CTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACAGTCACAGAAAAGCAGCCTaGCCAGTTGAGTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: LCDQDVGTAWHVTLWTYSHRKAA*PVEFLW
Trigger: CCACAAGAACTCAACTGGCAAGGCTGCTTTTCTGTG...ACTGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CAA 90 bp AGCCAGAAGAGCAGGGACCCGGAGATCCTCGAGAGTGAGACAGACAGGACAGGCGGCAGCCCGGATACCTaGGTAGTATTTTACATTTCT +
Preference number: 5 (lower is better)
Translates to: SQKSRDPEILESETDRTGGSPDT*VVFYIS
Trigger: AGAAATGTAAAATACTACCAAGGTATCCGGGCTGCC...GCCTGTCCTGTCTGTCTCACTCTCGAGGATCTCCGGGTCCCTGCTCTTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp TCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCAAGGCCTTCTGTCTCTGTGACCAGGATGTaGGCACGGCATGGCATGTCA +
Preference number: 5 (lower is better)
Translates to: SLTRVPCQCQCREPRPSVSVTRM*ARHGMS
Trigger: TGACATGCCATGCCGTGCCAACATCCTGGTCACAGA...GACAGAAGGCCTTGGTTCTCGACATTGGCACTGGCACGGGACTCTTGTCAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
CDS-3UTR CAA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGGAGCTACTGACTTGCTaGCTGAAGTCTATGCTGAAC +
Preference number: 5 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKELLTC*LKSMLN
Trigger: GTTCAGCATAGACTTCAGCAAGCAAGTCAGTAGCTC...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGCACCACAGGCTCCTCTaGTGGCAGGAAGTACACACA +
Preference number: 5 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGHHRLL*WQEVHT
Trigger: TGTGTGTACTTCCTGCCACAAGAGGAGCCTGTGGTG...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp TGCCATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACCCTGTAGGTCCTCATTaGTTAATAATTCCGGCCGTT +
Preference number: 5 (lower is better)
Translates to: CHTPPAGGAFQSEGGAGNPVGPH*LIIPAV
Trigger: AACGGCCGGAATTATTAACAAATGAGGACCTACAGG...GTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS GCA 90 bp AGAACAGCTCTGGCTGAGTTGGGCAGGTCTTGTGAGTCAGCCCCTTaGCCTTTATTAAGCGACTGTCCCTGCTCCACACTCACTCTTCTA +
Preference number: 5 (lower is better)
Translates to: RTALAELGRSCESAP*PLLSDCPCSTLTLL
Trigger: TAGAAGAGTGAGTGTGGAGCAGGGACAGTCGCTTAATAAAGGGCAAGGGGCTGACTCACAAGACCTGCCCAACTCAGCCAGAGCTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS-3UTR CAA 90 bp AACTCTGCTCATACAGGCGGCTCGGCTGGCCTGGCACAAGCCTCACCTTCTAAGCTGCATAAGATGACCTaGCAATCTCCTGGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: NSAHTGGSAGLAQASPSKLHKMT*QSPGGN
Trigger: ATTACCACCAGGAGATTGCAAGGTCATCTTATGCAG...CTTAGAAGGTGAGGCTTGTGCCAGGCCAGCCGAGCCGCCTGTATGAGCAGAGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGGCTCGGTGGAATGCTTGTaGATAACCTTAATCTTATCA +
Preference number: 5 (lower is better)
Translates to: ERSKATAPTDLPGEAALGSVECL*ITLILS
Trigger: TGATAAGATTAAGGTTATCAACAAGCATTCCACCGA...GCCCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GCATGGGTACTCCCACAGCGGGTGGGGCTCAGCTTCCCTGCTCTCCCTGAAGTCTCGGTGGAATGCTTGTaGATAACCTTAATCTTATCA +
Preference number: 5 (lower is better)
Translates to: AWVLPQRVGLSFPALPEVSVECL*ITLILS
Trigger: TGATAAGATTAAGGTTATCAACAAGCATTCCACCGA...GACTTCAGGGAGAGCAGGGAAGCTGAGCCCCACCCGCTGTGGGAGTACCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CAA 90 bp GCCAGGGTCTTCAAGCCCCAGAGACCCAGCCACAACTCAGCATCTCCACCCTCCACCTCGGTGGAATGCTaGTTGATAACCTTAATCTTA +
Preference number: 5 (lower is better)
Translates to: ARVFKPQRPSHNSASPPSTSVEC*LITLIL
Trigger: TAAGATTAAGGTTATCAACAAGCATTCCACCGAGGT...GGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTCTGGGGCTTGAAGACCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp AAAGGTCAGGATCTGCCAGGGCTCGGAGAGGCTGCGGCATGGGTACTCCCACAGACCTCGGTGGAATGCTaGTTGATAACCTTAATCTTA +
Preference number: 5 (lower is better)
Translates to: KGQDLPGLGEAAAWVLPQTSVEC*LITLIL
Trigger: TAAGATTAAGGTTATCAACAAGCATTCCACCGAGGT...CTGTGGGAGTACCCATGCCGCAGCCTCTCCGAGCCCTGGCAGATCCTGACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CAA 90 bp CATGGCATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATATCTGTGACCAGGATGTaGGCACGGCATGGCATGTCA +
Preference number: 5 (lower is better)
Translates to: HGMSPSGPTVTSVECLLISVTRM*ARHGMS
Trigger: TGACATGCCATGCCGTGCCAACATCCTGGTCACAGA...TATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CAA 90 bp AACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTTGGATGGGAAATAGCTaGTTCCACGACCACATCCTC +
Preference number: 5 (lower is better)
Translates to: NNSVTRMLARHGMSPSGPWMGNS*FHDHIL
Trigger: GAGGATGTGGTCGTGGAACAAGCTATTTCCCATCCA...AGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562050.5
CDS-3UTR CAA 90 bp CAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTTGTCCTGTAGGTCCTCATTaGTTAATAATTCCGGCCGTT +
Preference number: 5 (lower is better)
Translates to: QPLSWACISGTALGQLPCPVGPH*LIIPAV
Trigger: AACGGCCGGAATTATTAACAAATGAGGACCTACAGG...ACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS TCA 90 bp TCTGCATGCTGCTGTTCTCATCAGGGTCCTCTCGGTAGGGGCAGTTaGTTGCAGACTCCAACTTTTCCCAATGATCCCATAACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SACCCSHQGPLGRGS*LQTPTFPNDPITSS
Trigger: GGAGCTGGTTATGGGATCATTGGGAAAAGTTGGAGTCTGCAATCAACTGCCCCTACCGAGAGGACCCTGATGAGAACAGCAGCATGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS TCA 90 bp CTGCCTGTCTCAAGCCTTCTGAGGACCACATATCTACATCACTGGTaGGAACACCCAGCACCTAGAAACTTGGTGACCACCACAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LPVSSLLRTTYLHHW*EHPAPRNLVTTTAV
Trigger: CACAGCTGTGGTGGTCACCAAGTTTCTAGGTGCTGGGTGTTCTCACCAGTGATGTAGATATGTGGTCCTCAGAAGGCTTGAGACAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS GCA 90 bp TGCCAATGTCGAGAACCAAGGCCTTCTGTCCTCTGTCCTTCACCCTaGTCACGGCAGCCCGGATACCTTGGTAGTATTTTACATTCTTGC +
Preference number: 5 (lower is better)
Translates to: CQCREPRPSVLCPSP*SRQPGYLGSILHSC
Trigger: GCAAGAATGTAAAATACTACCAAGGTATCCGGGCTGCCGTGAGCAGGGTGAAGGACAGAGGACAGAAGGCCTTGGTTCTCGACATTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
CDS CCA 90 bp GTGGATTTGGAAAGCATAGAAGTAAAAATGCCTGGCACCCCACTGTaGGATACCCACCACTCTCGGCCATCTGCCTTAGCACACGAGAGA +
Preference number: 5 (lower is better)
Translates to: VDLESIEVKMPGTPL*DTHHSRPSALAHER
Trigger: TCTCTCGTGTGCTAAGGCAGATGGCCGAGAGTGGTGGGTATCCCACAGTGGGGTGCCAGGCATTTTTACTTCTATGCTTTCCAAATCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS-3UTR CAA 90 bp TCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCAAGGCCTTCTGTCCACAGAAAAGCAGCCTaGCCAGTTGAGTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SLTRVPCQCQCREPRPSVHRKAA*PVEFLW
Trigger: CCACAAGAACTCAACTGGCAAGGCTGCTTTTCTGTG...GACAGAAGGCCTTGGTTCTCGACATTGGCACTGGCACGGGACTCTTGTCAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
CDS-3UTR CAA 90 bp GTGAGAGAAGCAAGGCCACGGCACCTACTGACCTTCCTGGTGAAGCGGCGCTGGTCGGTGGAATGCTTGTaGATAACCTTAATCTTATCA +
Preference number: 5 (lower is better)
Translates to: VREARPRHLLTFLVKRRWSVECL*ITLILS
Trigger: TGATAAGATTAAGGTTATCAACAAGCATTCCACCGA...CCAGCGCCGCTTCACCAGGAAGGTCAGTAGGTGCCGTGGCCTTGCTTCTCTCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp CATACCCCACCTGCAGGAGGGGCTTTCCAATCTGAGGGAGGTGCAGGGAACAGGACCTCGGTGGAATGCTaGTTGATAACCTTAATCTTA +
Preference number: 5 (lower is better)
Translates to: HTPPAGGAFQSEGGAGNRTSVEC*LITLIL
Trigger: TAAGATTAAGGTTATCAACAAGCATTCCACCGAGGT...CCTGTTCCCTGCACCTCCCTCAGATTGGAAAGCCCCTCCTGCAGGTGGGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCTCAGGCCACTTTATaGCTCAAGAGTGGTCAGTCT +
Preference number: 5 (lower is better)
Translates to: EASSAKMQQDATRRSLSHPQATL*LKSGQS
Trigger: AGACTGACCACTCTTGAGCAATAAAGTGGCCTGAGG...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp ATGCCTGAACTCCATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAAACAAGAGGCACATCTaGCTGTTCCCTGCACACCCT +
Preference number: 5 (lower is better)
Translates to: MPELHDDVACVGVKLHCINKRHI*LFPAHP
Trigger: AGGGTGTGCAGGGAACAGCAAGATGTGCCTCTTGTT...TATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATGGAGTTCAGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS GCA 90 bp TGCCAATGTCGAGAACCAAGGCCTTCTGTCCTCTGTCCTTCACCCTaGTCACGGCAGCCCGGATACCTTGGTAGTATTTTACATTTCTGT +
Preference number: 5 (lower is better)
Translates to: CQCREPRPSVLCPSP*SRQPGYLGSILHFC
Trigger: ACAGAAATGTAAAATACTACCAAGGTATCCGGGCTGCCGTGAGCAGGGTGAAGGACAGAGGACAGAAGGCCTTGGTTCTCGACATTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000561806.5
ENST00000562381.7
ENST00000562456.1
ENST00000563520.5
ENST00000563562.5
ENST00000564441.5
ENST00000565356.5
ENST00000568975.5
ENST00000569047.7
ENST00000569571.5
ENST00000675132.1
CDS GCA 90 bp TGCCAATGTCGAGAACCAAGGCCTTCTGTCCTCTGTCCTTCACCCTaGTCACGGCAGCCCGGATACCTTGGTAGTATTTTACATTCTAAG +
Preference number: 5 (lower is better)
Translates to: CQCREPRPSVLCPSP*SRQPGYLGSILHSK
Trigger: CTTAGAATGTAAAATACTACCAAGGTATCCGGGCTGCCGTGAGCAGGGTGAAGGACAGAGGACAGAAGGCCTTGGTTCTCGACATTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS-3UTR CAA 90 bp CAGCCACTTTCCTGGGCCTGCATCTCAGGAACTGCTCTGGGACAGCTGCCTTGTACTTCGGAAAGGCGTTaGGATTTTGTTCTAAAAGCA +
Preference number: 5 (lower is better)
Translates to: QPLSWACISGTALGQLPCTSERR*DFVLKA
Trigger: TGCTTTTAGAACAAAATCCAAACGCCTTTCCGAAGT...ACAAGGCAGCTGTCCCAGAGCAGTTCCTGAGATGCAGGCCCAGGAAAGTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR CAA 90 bp TGGCATGTCACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACAAGCAGCCTTGCCAGTaGAGTTCTTGTGGACAAGTC +
Preference number: 5 (lower is better)
Translates to: WHVTLWTYSHLGGMLVDNKQPCQ*SSCGQV
Trigger: GACTTGTCCACAAGAACTCAACTGGCAAGGCTGCTT...GTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGTGACATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CAA 90 bp GATCAGCTCTGTGTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATCACAGAAAAGCAGCCTaGCCAGTTGAGTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: DQLCVKQLCDQDVGTAWHHRKAA*PVEFLW
Trigger: CCACAAGAACTCAACTGGCAAGGCTGCTTTTCTGTG...ATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGACACAGAGCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CAA 90 bp GGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCCTGCATAAGATGACCTaGCAATCTCCTGGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: GQQCKDATRCNTAQSFPSLHKMT*QSPGGN
Trigger: ATTACCACCAGGAGATTGCAAGGTCATCTTATGCAG...GGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp CTCCCCGATCAGCTCTGTGTCAAACAACTCTGTGACCAGGATGTTGGCACGGCACTGCATAAGATGACCTaGCAATCTCCTGGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: LPDQLCVKQLCDQDVGTALHKMT*QSPGGN
Trigger: ATTACCACCAGGAGATTGCAAGGTCATCTTATGCAG...TGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGACACAGAGCTGATCGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562381.7
CDS-3UTR CAA 90 bp AACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACAGGCAGCCCGGATACCTaGGTAGTATTTTACATTTCT +
Preference number: 5 (lower is better)
Translates to: NSVTRMLARHGMSPSGPTGSPDT*VVFYIS
Trigger: AGAAATGTAAAATACTACCAAGGTATCCGGGCTGCC...TGTAGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562381.7
CDS-3UTR CAA 90 bp GCTTCCCTGCTCTCCCTGAAGTCCAGGGCACGCTTAATCATGTCGTCCATGATGGGCAGCCCGGATACCTaGGTAGTATTTTACATTTCT +
Preference number: 5 (lower is better)
Translates to: ASLLSLKSRARLIMSSMMGSPDT*VVFYIS
Trigger: AGAAATGTAAAATACTACCAAGGTATCCGGGCTGCC...CATCATGGACGACATGATTAAGCGTGCCCTGGACTTCAGGGAGAGCAGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS-3UTR CAA 90 bp GGGCAGCGCCCCCTCCCCGATCAGCTCTGTGTCAAACAACTCTGTGACCAGGATTCGGTGGAATGCTTGTaGATAACCTTAATCTTATCA +
Preference number: 5 (lower is better)
Translates to: GQRPLPDQLCVKQLCDQDSVECL*ITLILS
Trigger: TGATAAGATTAAGGTTATCAACAAGCATTCCACCGA...ATCCTGGTCACAGAGTTGTTTGACACAGAGCTGATCGGGGAGGGGGCGCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000562381.7
CDS-3UTR CAA 90 bp GGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATCCCCTGTAGGTCCTCATTaGTTAATAATTCCGGCCGTT +
Preference number: 5 (lower is better)
Translates to: GQQCKDATRCNTAQSFPSPVGPH*LIIPAV
Trigger: AACGGCCGGAATTATTAACAAATGAGGACCTACAGG...GGATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp ATGCCTGAACTCCATGATGATGTCGCCTGTGTCGGGGTGAAACTCCACTGCATAAGAGATGTCTCTGTGTaGGAGCATTCTCAGCACCTC +
Preference number: 5 (lower is better)
Translates to: MPELHDDVACVGVKLHCIRDVSV*EHSQHL
Trigger: GAGGTGCTGAGAATGCTCCAACACAGAGACATCTCT...TATGCAGTGGAGTTTCACCCCGACACAGGCGACATCATCATGGAGTTCAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS-3UTR CAA 90 bp GCCATCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCAAGGCCTTCGGCAGCCCGGATACCTaGGTAGTATTTTACATTCTT +
Preference number: 5 (lower is better)
Translates to: AIIDKSPVPVPMSRTKAFGSPDT*VVFYIL
Trigger: AAGAATGTAAAATACTACCAAGGTATCCGGGCTGCC...GAAGGCCTTGGTTCTCGACATTGGCACTGGCACGGGACTCTTGTCAATGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
CDS-3UTR CAA 90 bp GTGACCGCCATCATTGACAAGAGTCCCGTGCCAGTGCCAATGTCGAGAACCAAGGGCAGCCCGGATACCTaGGTAGTATTTTACATTCTT +
Preference number: 5 (lower is better)
Translates to: VTAIIDKSPVPVPMSRTKGSPDT*VVFYIL
Trigger: AAGAATGTAAAATACTACCAAGGTATCCGGGCTGCC...CTTGGTTCTCGACATTGGCACTGGCACGGGACTCTTGTCAATGATGGCGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
CDS TCA 90 bp TGTCTGGAAACTTCAGCAGGCTTCGGTGCTTCCAAAAGGTTCAAATaGGCCTCACAAGTTCATCTAGGTGCAGCCCTCAAGGCTAGGAGA +
Preference number: 5 (lower is better)
Translates to: CLETSAGFGASKRFK*ASQVHLGAALKARR
Trigger: TCTCCTAGCCTTGAGGGCTGCACCTAGATGAACTTGTGAGGCTCATTTGAACCTTTTGGAAGCACCGAAGCCTGCTGAAGTTTCCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS CCA 90 bp AATTTTAGAGGCATTCCTGAAGCTGGGGTTGGTCAGAAGTCAGCGTaGAGGATTAGCATTCACAGTGGAGCTGCTTCAGCCTCCAAGCTT +
Preference number: 5 (lower is better)
Translates to: NFRGIPEAGVGQKSA*RISIHSGAASASKL
Trigger: AAGCTTGGAGGCTGAAGCAGCTCCACTGTGAATGCTAATCCTCCACGCTGACTTCTGACCAACCCCAGCTTCAGGAATGCCTCTAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563443.1
CDS-3UTR CAA 90 bp GCCACAGCTGGAGCCAGAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGTAGAAAGAACTAGGTaGCATAAGCAAAATGTGCCA +
Preference number: 5 (lower is better)
Translates to: ATAGARGQQCKDATRCNTVERTR*HKQNVP
Trigger: TGGCACATTTTGCTTATGCAACCTAGTTCTTTCTAC...CGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTCTGGCTCCAGCTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS-3UTR CAA 90 bp GAGAGATGTCTCTGTGTTGGAGCATTCTCAGCACCTCAGAAGCACAAGCAGGGGCTGCATAAGATGACCTaGCAATCTCCTGGTGGTAAT +
Preference number: 5 (lower is better)
Translates to: ERCLCVGAFSAPQKHKQGLHKMT*QSPGGN
Trigger: ATTACCACCAGGAGATTGCAAGGTCATCTTATGCAG...CCCCTGCTTGTGCTTCTGAGGTGCTGAGAATGCTCCAACACAGAGACATCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp GAGGCCAGCAGTGCAAAGATGCAACAAGATGCAACACGGCGCAGTCTTTCCCATGGCAGCCCGGATACCTaGGTAGTATTTTACATTTCT +
Preference number: 5 (lower is better)
Translates to: EASSAKMQQDATRRSLSHGSPDT*VVFYIS
Trigger: AGAAATGTAAAATACTACCAAGGTATCCGGGCTGCC...ATGGGAAAGACTGCGCCGTGTTGCATCTTGTTGCATCTTTGCACTGCTGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS TCA 90 bp AGCGACTGTCCCTGCTCCACACTCACTCTTCTATCCTCTACTAAGTaGTGCCAGAGCCCTGCAAACCATGTTCTCCTTTTTCCAACTGTT +
Preference number: 5 (lower is better)
Translates to: SDCPCSTLTLLSSTK*CQSPANHVLLFPTV
Trigger: AACAGTTGGAAAAAGGAGAACATGGTTTGCAGGGCTCTGGCATCACTTAGTAGAGGATAGAAGAGTGAGTGTGGAGCAGGGACAGTCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS CCA 90 bp ACTCAGCCTAGGCAGCAGAGTGAGACTGCTTTTACAGGACCACTCTaGTTGGCGTGTAGTGAATACACGACTCTCCAATTACTCAGAACA +
Preference number: 5 (lower is better)
Translates to: TQPRQQSETAFTGPL*LACSEYTTLQLLRT
Trigger: TGTTCTGAGTAATTGGAGAGTCGTGTATTCACTACACGCCAACCAGAGTGGTCCTGTAAAAGCAGTCTCACTCTGCTGCCTAGGCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565983.5
CDS-3UTR CAA 90 bp GAGACCCAGCCACAACTCAGCATCTCCACCCTCCTAGCAGAAGCCAGAAGAGCATCGGTGGAATGCTTGTaGATAACCTTAATCTTATCA +
Preference number: 5 (lower is better)
Translates to: ETQPQLSISTLLAEARRASVECL*ITLILS
Trigger: TGATAAGATTAAGGTTATCAACAAGCATTCCACCGA...TGCTCTTCTGGCTTCTGCTAGGAGGGTGGAGATGCTGAGTTGTGGCTGGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp AACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTACCTCGGTGGAATGCTaGTTGATAACCTTAATCTTA +
Preference number: 5 (lower is better)
Translates to: NNSVTRMLARHGMSPSGPTSVEC*LITLIL
Trigger: TAAGATTAAGGTTATCAACAAGCATTCCACCGAGGT...AGGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CAA 90 bp AAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTGGACCTCGGTGGAATGCTTGTaGATAACCTTAATCTTATCA +
Preference number: 5 (lower is better)
Translates to: KQLCDQDVGTAWHVTLWTSVECL*ITLILS
Trigger: TGATAAGATTAAGGTTATCAACAAGCATTCCACCGA...GGTCCAGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CAA 90 bp CAGCTCTGTGTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCTCGGTGGAATGCTaGTTGATAACCTTAATCTTA +
Preference number: 5 (lower is better)
Translates to: QLCVKQLCDQDVGTAWHVTSVEC*LITLIL
Trigger: TAAGATTAAGGTTATCAACAAGCATTCCACCGAGGT...GACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGACACAGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CAA 90 bp TTATTGCTCAAGAGTGGTCAGTCTGGGGTATCTGCATGCCTGAACTCCATGATGGAGCTACTGACTTGCTaGCTGAAGTCTATGCTGAAC +
Preference number: 5 (lower is better)
Translates to: LLLKSGQSGVSACLNSMMELLTC*LKSMLN
Trigger: GTTCAGCATAGACTTCAGCAAGCAAGTCAGTAGCTC...CATCATGGAGTTCAGGCATGCAGATACCCCAGACTGACCACTCTTGAGCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568975.5
ENST00000675132.1
CDS-3UTR CAA 90 bp AGCTGGTGCAGCACTGAGGCCAGACACCTATGGATGTGGCTTGAAGTTACCTGTTCCAAGTGGTTAGCCTaGAAGATTTTTCTCAACAGT +
Preference number: 5 (lower is better)
Translates to: SWCSTEARHLWMWLEVTCSKWLA*KIFLNS
Trigger: ACTGTTGAGAAAAATCTTCAAGGCTAACCACTTGGA...ACAGGTAACTTCAAGCCACATCCATAGGTGTCTGGCCTCAGTGCTGCACCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000675132.1
CDS-3UTR CAA 90 bp CTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACCTTAATCTTATCAAGCAGCCTTGCCAGTaGAGTTCTTGTGGACAAGTC +
Preference number: 5 (lower is better)
Translates to: LWTYSHLGGMLVDNLNLIKQPCQ*SSCGQV
Trigger: GACTTGTCCACAAGAACTCAACTGGCAAGGCTGCTT...GATAAGATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS-3UTR CAA 90 bp TGTGTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATGGCATGTCACCCTCTCGGTGGAATGCTTGTaGATAACCTTAATCTTATCA +
Preference number: 5 (lower is better)
Translates to: CVKQLCDQDVGTAWHVTLSVECL*ITLILS
Trigger: TGATAAGATTAAGGTTATCAACAAGCATTCCACCGA...GAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS CCA 90 bp ACAAGAGCAAGCAAAGCTTTCAACACAGGGTGTGTAAATCTCACCTaGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACCTTAAT +
Preference number: 5 (lower is better)
Translates to: TRASKAFNTGCVNLT*TYSHLGGMLVDNLN
Trigger: ATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGGTGAGATTTACACACCCTGTGTTGAAAGCTTTGCTTGCTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561806.5
CDS-3UTR CAA 90 bp ACCCTCTGGACCTACAGTCACCTCGGTGGAATGCTTGTTGATAACCTTAATCTTACCTCGGTGGAATGCTaGTTGATAACCTTAATCTTA +
Preference number: 5 (lower is better)
Translates to: TLWTYSHLGGMLVDNLNLTSVEC*LITLIL
Trigger: TAAGATTAAGGTTATCAACAAGCATTCCACCGAGGT...AAGATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562050.5
ENST00000562381.7
ENST00000566341.5
CDS TCA 90 bp TTCCTGACTTCTACACCATACGCCTCTCAGTATCATTTAACATCATaGCCCCCAGGGATTCTTAACCTTCTTGTAATCCAAGACTTCAAA +
Preference number: 5 (lower is better)
Translates to: FLTSTPYASQYHLTS*PPGILNLLVIQDFK
Trigger: TTTGAAGTCTTGGATTACAAGAAGGTTAAGAATCCCTGGGGGTCATGATGTTAAATGATACTGAGAGGCGTATGGTGTAGAAGTCAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566430.2
CDS GCA 72 bp CAAGGCCGCCGCGGGAAACCCTCCGCTCGCCTCCGCTaGTACCACTTTTACCGCGGCCAGCACGCGGGGCGG +
Preference number: 6 (lower is better)
Translates to: QGRRGKPSARLR*YHFYRGQHAGR
Trigger: CCGCCCCGCGTGCTGGCCGCGGTAAAAGTGGTAGCAGCGGAGGCGAGCGGAGGGTTTCCCGCGGCGGCCTTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565745.5
CDS GCA 72 bp AGACTCCGCCGCGGGAAACCCTCCGCTCGCCTCCGCTaGTACCACTTTTACCGCGGCCAGCACGCGGGGCGG +
Preference number: 6 (lower is better)
Translates to: RLRRGKPSARLR*YHFYRGQHAGR
Trigger: CCGCCCCGCGTGCTGGCCGCGGTAAAAGTGGTAGCAGCGGAGGCGAGCGGAGGGTTTCCCGCGGCGGAGTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441236.3
ENST00000675132.1
CDS TCA 72 bp CAGGTGGGCCCCGGGCCACAGGGAGGGATAAATGCGTaGCAGTACAGCCCCGGTGCCTGGCGGCAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: QVGPGPQGGINA*QYSPGAWRQAG
Trigger: CCCAGCCTGCCGCCAGGCACCGGGGCTGTACTGTCACGCATTTATCCCTCCCTGTGGCCCGGGGCCCACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS GCA 72 bp TCTCTGTGGCTGAGGGGAGGCGCCAGGCACGAGTACTaGGACAGAGCCCCGCGAGTGGCAGGCACCCGGCTG +
Preference number: 6 (lower is better)
Translates to: SLWLRGGARHEY*DRAPRVAGTRL
Trigger: CAGCCGGGTGCCTGCCACTCGCGGGGCTCTGTCGCAGTACTCGTGCCTGGCGCCTCCCCTCAGCCACAGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000565983.5
CDS GCA 72 bp GAAATCCGCCGCGGGAAACCCTCCGCTCGCCTCCGCTaGTACCACTTTTACCGCGGCCAGCACGCGGGGCGG +
Preference number: 6 (lower is better)
Translates to: EIRRGKPSARLR*YHFYRGQHAGR
Trigger: CCGCCCCGCGTGCTGGCCGCGGTAAAAGTGGTAGCAGCGGAGGCGAGCGGAGGGTTTCCCGCGGCGGATTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562381.7
CDS CCA 72 bp CCACAGCGTGCAGCGAGGCTGCCTGGGGCATCACCATaGCACCTGGCCCCAGGTGCTGGTCCACAGCGGTCC +
Preference number: 6 (lower is better)
Translates to: PQRAARLPGASP*HLAPGAGPQRS
Trigger: GGACCGCTGTGGACCAGCACCTGGGGCCAGGTGCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCTGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000563608.2
ENST00000565356.5
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS CCA 72 bp GTGCAGCGAGGCTGCCTGGGGCATCACCATGGCACCTaGCCCCAGGTGCTGGTCCACAGCGGTCCGCACGTA +
Preference number: 6 (lower is better)
Translates to: VQRGCLGHHHGT*PQVLVHSGPHV
Trigger: TACGTGCGGACCGCTGTGGACCAGCACCTGGGGCCAGGTGCCATGGTGATGCCCCAGGCAGCCTCGCTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000563608.2
ENST00000565356.5
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS CCA 72 bp CCCTCCCCAGGCTCTGAGCACCACAAGAGCAGGGACTaGTGGCCCAGCATCCCCCAGCAGTGGGCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: PSPGSEHHKSRD*WPSIPQQWASA
Trigger: GGCACTGGCCCACTGCTGGGGGATGCTGGGCCACCAGTCCCTGCTCTTGTGGTGCTCAGAGCCTGGGGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566708.1
CDS CCA 72 bp CTTGCCAGGGAGGATGCCCGGGGCCCTGGGCCTGGCTaGTCGTGTGAAGTGGCGCCAGGTCTAAGACAGGGC +
Preference number: 6 (lower is better)
Translates to: LAREDARGPGPG*SCEVAPGLRQG
Trigger: GCCCTGTCTTAGACCTGGCGCCACTTCACACGACCAGCCAGGCCCAGGGCCCCGGGCATCCTCCCTGGCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS CCA 72 bp CTGAACTCCACAACCACAGCGTGCAGCGAGGCTGCCTaGGGCATCACCATGGCACCTGGCCCCAGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: LNSTTTACSEAA*GITMAPGPRCW
Trigger: CCAGCACCTGGGGCCAGGTGCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCTGTGGTTGTGGAGTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000563608.2
ENST00000565356.5
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS TCA 72 bp GGGTGCGATGGTTGGAGCTACTGCGGTCTCTGTGGCTaGGGGGAGGCGCCAGGCACGAGTACTGCGACAGAG +
Preference number: 6 (lower is better)
Translates to: GCDGWSYCGLCG*GEAPGTSTATE
Trigger: CTCTGTCGCAGTACTCGTGCCTGGCGCCTCCCCTCAGCCACAGAGACCGCAGTAGCTCCAACCATCGCACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000565983.5
CDS GCA 72 bp ACAGGGAGGGATAAATGCGTGACAGTACAGCCCCGGTaGCTGGCGGCAGGCTGGGGGCACCTGCATCCAGGA +
Preference number: 6 (lower is better)
Translates to: TGRDKCVTVQPR*LAAGWGHLHPG
Trigger: TCCTGGATGCAGGTGCCCCCAGCCTGCCGCCAGGCACCGGGGCTGTACTGTCACGCATTTATCCCTCCCTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS GCA 72 bp ATCCGCCACAGGTCCCTGAACTCCACAACCACAGCGTaGAGCGAGGCTGCCTGGGGCATCACCATGGCACCT +
Preference number: 6 (lower is better)
Translates to: IRHRSLNSTTTA*SEAAWGITMAP
Trigger: AGGTGCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCTGTGGTTGTGGAGTTCAGGGACCTGTGGCGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000563608.2
ENST00000567542.5
ENST00000675132.1
CDS GCA 72 bp GGAGGTCAAGGCTGCAGTGCGCCTCGATCACACCACTaGACTCAGCCTAGGCAGCAGAGTGAGACTCCGCCG +
Preference number: 6 (lower is better)
Translates to: GGQGCSAPRSHH*TQPRQQSETPP
Trigger: CGGCGGAGTCTCACTCTGCTGCCTAGGCTGAGTGCAGTGGTGTGATCGAGGCGCACTGCAGCCTTGACCTCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441236.3
ENST00000675132.1
CDS GCA 72 bp GGCTCCTCTGCCGAAACCCTGGTGCCAAGGACACCATaGTCGCTGCACACAGAACCCCAAAGCGACCCCACC +
Preference number: 6 (lower is better)
Translates to: GSSAETLVPRTP*SLHTEPQSDPT
Trigger: GGTGGGGTCGCTTTGGGGTTCTGTGTGCAGCGAGCATGGTGTCCTTGGCACCAGGGTTTCGGCAGAGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565983.5
ENST00000569571.5
CDS CCA 72 bp TTAGGGGTGCGATGGTTGGAGCTACTGCGGTCTCTGTaGCTGAGGGGAGGCGCCAGGCACGAGTACTGCGAC +
Preference number: 6 (lower is better)
Translates to: LGVRWLELLRSL*LRGGARHEYCD
Trigger: GTCGCAGTACTCGTGCCTGGCGCCTCCCCTCAGCCACAGAGACCGCAGTAGCTCCAACCATCGCACCCCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000565983.5
CDS CAA 90 bp GGTCTGGCAATCAGAGAACTCGTGGCCCAGTTAGGGGTGCGATGGTaGGAGCTACTGCGGTCTCTGTGGCTGAGGGGAGGCGCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: GLAIRELVAQLGVRW*ELLRSLWLRGGARH
Trigger: GTGCCTGGCGCCTCCCCTCAGCCACAGAGACCGCAGTAGCTCCAACCATCGCACCCCTAACTGGGCCACGAGTTCTCTGATTGCCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000565983.5
CDS GCA 72 bp GCCACTCCACAGACCCCGTGGTCGGATTGGCCCGACTaGAGAAGATCTTCATGGTGCCCACTAGCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: ATPQTPWSDWPD*RRSSWCPLAPQ
Trigger: CTGGGGAGCTAGTGGGCACCATGAAGATCTTCTGCAGTCGGGCCAATCCGACCACGGGGTCTGTGGAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000561806.5
ENST00000562050.5
ENST00000562381.7
ENST00000562456.1
ENST00000563562.5
ENST00000565356.5
ENST00000565745.5
ENST00000566341.5
ENST00000568975.5
ENST00000569047.7
ENST00000569571.5
ENST00000675132.1
CDS GCA 72 bp TGTTCCCTGCACACCCTGAACTCCACAACCACAGCGTaGAGCGAGGCTGCCTGGGGCATCACCATGGCACCT +
Preference number: 6 (lower is better)
Translates to: CSLHTLNSTTTA*SEAAWGITMAP
Trigger: AGGTGCCATGGTGATGCCCCAGGCAGCCTCGCTGCACGCTGTGGTTGTGGAGTTCAGGGTGTGCAGGGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS GCA 72 bp CTGCCGAAACCCTGGTGCCAAGGACACCATGCTCGCTaGACACAGAACCCCAAAGCGACCCCACCTTCCCAG +
Preference number: 6 (lower is better)
Translates to: LPKPWCQGHHAR*TQNPKATPPSQ
Trigger: CTGGGAAGGTGGGGTCGCTTTGGGGTTCTGTGTGCAGCGAGCATGGTGTCCTTGGCACCAGGGTTTCGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565983.5
ENST00000569571.5
CDS CCA 72 bp TCACAGCTGGCAGTGGCAGTGCAAGTCAGGGCCCTATaGCCTTTCTGGCCCCTGGCAGAACAGCTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: SQLAVAVQVRAL*PFWPLAEQLWL
Trigger: CAGCCAGAGCTGTTCTGCCAGGGGCCAGAAAGGCCATAGGGCCCTGACTTGCACTGCCACTGCCAGCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS TCA 72 bp CATCCAGTGGTCCCGCCACTGCATCTCCTCTGGGTCTaGGTGTGCCCAGAAGGGGGCCATGGTGCACTTGAT +
Preference number: 6 (lower is better)
Translates to: HPVVPPLHLLWV*VCPEGGHGALD
Trigger: ATCAAGTGCACCATGGCCCCCTTCTGGGCACACTCAGACCCAGAGGAGATGCAGTGGCGGGACCACTGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000564050.6
ENST00000565356.5
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS GCA 72 bp CAGAAGTCGGCACCAGCTCCTTGGGCCCCTCAGAGCTaGAGCCGTACTTGGACAGTGGTCCACAGGATCTCT +
Preference number: 6 (lower is better)
Translates to: QKSAPAPWAPQS*SRTWTVVHRIS
Trigger: AGAGATCCTGTGGACCACTGTCCAAGTACGGCTGCAGCTCTGAGGGGCCCAAGGAGCTGGTGCCGACTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565761.1
CDS GCA 72 bp CACCCCACTGTGGGATACCCACCACTCTCGGCCATCTaGCTTAGCACACGAGAGACAGACACTGGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: HPTVGYPPLSAI*LSTRETDTGPG
Trigger: TCCTGGGCCAGTGTCTGTCTCTCGTGTGCTAAGGCAGATGGCCGAGAGTGGTGGGTATCCCACAGTGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS GCA 72 bp ACAAGTCTGACTGTCAGAAATCCGGGTGTCCCGAGCTaGCCCACGCGGAGGAGTCCAAGTAGGCCCACGCTA +
Preference number: 6 (lower is better)
Translates to: TSLTVRNPGVPS*PTRRSPSRPTL
Trigger: TAGCGTGGGCCTACTTGGACTCCTCCGCGTGGGGCAGCTCGGGACACCCGGATTTCTGACAGTCAGACTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569571.5
CDS GCA 72 bp CAAGGCCTGAGCCGCTCTACAGGCACCCAAGGTTCCTaGAAGAAAACAAGGTTCCCCACCCGCCTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: QGLSRSTGTQGS*KKTRFPTRLLC
Trigger: GCAGAGGAGGCGGGTGGGGAACCTTGTTTTCTTGCAGGAACCTTGGGTGCCTGTAGAGCGGCTCAGGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565356.5
CDS CCA 72 bp GTCAAACAACTCTGTGACCAGGATGTTGGCACGGCATaGCATGTCACCCTCCGCCGCGGGAAACCCTCCGCT +
Preference number: 6 (lower is better)
Translates to: VKQLCDQDVGTA*HVTLRRGKPSA
Trigger: AGCGGAGGGTTTCCCGCGGCGGAGGGTGACATGCCATGCCGTGCCAACATCCTGGTCACAGAGTTGTTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564050.6
CDS CCA 72 bp TGGGGATGTGGCCAGACTCAGATCTACAAGTTCATGTaGGCTCCGTGTGGAGGACGGCCAGAGCAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: WGCGQTQIYKFM*APCGGRPEQEG
Trigger: CCCCTCCTGCTCTGGCCGTCCTCCACACGGAGCCCACATGAACTTGTAGATCTGAGTCTGGCCACATCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS CAA 72 bp ATCAGAGAACTCGTGGCCCAGTTAGGGGTGCGATGGTaGGAGCTACTGCGGTCTCTGTGGCTGAGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: IRELVAQLGVRW*ELLRSLWLRGG
Trigger: GCCTCCCCTCAGCCACAGAGACCGCAGTAGCTCCAACCATCGCACCCCTAACTGGGCCACGAGTTCTCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000565983.5
CDS TCA 72 bp GCAGTAGTCATCGTGGTGGGCTACCAGATAGAGCGCTaGGCCCTGCACCACAGGCTCCTCTTGTGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: AVVIVVGYQIER*ALHHRLLLWQE
Trigger: TTCCTGCCACAAGAGGAGCCTGTGGTGCAGGGCTCAGCGCTCTATCTGGTAGCCCACCACGATGACTACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000564050.6
ENST00000565356.5
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS TCA 72 bp CCCTCTCGATGGCATAGCAGAAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGAGTCCCGTGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: PSRWHSRSRHLL*PPSLTRVPCQC
Trigger: GCACTGGCACGGGACTCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACTTCTGCTATGCCATCGAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563562.5
CDS TCA 72 bp ATCACTGGTGAGAACACCCAGCACCTAGAAACTTGGTaGCCACCACAGCTGTGTGGCCCCGACAGGTGGGCC +
Preference number: 6 (lower is better)
Translates to: ITGENTQHLETW*PPQLCGPDRWA
Trigger: GGCCCACCTGTCGGGGCCACACAGCTGTGGTGGTCACCAAGTTTCTAGGTGCTGGGTGTTCTCACCAGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS GCA 72 bp ACCACAGGCTCCTCTTGTGGCAGGAAGTACACACACTaGATCCAGTGGTCCCGCCACTGCATCTCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: TTGSSCGRKYTH*IQWSRHCISSG
Trigger: CCCAGAGGAGATGCAGTGGCGGGACCACTGGATGCAGTGTGTGTACTTCCTGCCACAAGAGGAGCCTGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000564050.6
ENST00000565356.5
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS CCA 72 bp GCAATCAGAGAACTCGTGGCCCAGTTAGGGGTGCGATaGTTGGAGCTACTGCGGTCTCTGTGGCTGAGGGGA +
Preference number: 6 (lower is better)
Translates to: AIRELVAQLGVR*LELLRSLWLRG
Trigger: TCCCCTCAGCCACAGAGACCGCAGTAGCTCCAACCATCGCACCCCTAACTGGGCCACGAGTTCTCTGATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339507.9
ENST00000565983.5
CDS CCA 72 bp AAGAGCAGGGACTGGTGGCCCAGCATCCCCCAGCAGTaGGCCAGTGCCGTGACCAGATGTTCTGTGAACATT +
Preference number: 6 (lower is better)
Translates to: KSRDWWPSIPQQ*ASAVTRCSVNI
Trigger: AATGTTCACAGAACATCTGGTCACGGCACTGGCCCACTGCTGGGGGATGCTGGGCCACCAGTCCCTGCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566708.1
CDS CCA 72 bp ACATCCTCCCGGACTCCACCAGCTGTGCATAGACGGTaGCTCTGTGGGGCACGGCCTCACAATTTTCCTCGA +
Preference number: 6 (lower is better)
Translates to: TSSRTPPAVHRR*LCGARPHNFPR
Trigger: TCGAGGAAAATTGTGAGGCCGTGCCCCACAGAGCCACCGTCTATGCACAGCTGGTGGAGTCCGGGAGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS CCA 72 bp CCAGACTCAGATCTACAAGTTCATGTGGGCTCCGTGTaGAGGACGGCCAGAGCAGGAGGGGCTCAAACCAGG +
Preference number: 6 (lower is better)
Translates to: PDSDLQVHVGSV*RTARAGGAQTR
Trigger: CCTGGTTTGAGCCCCTCCTGCTCTGGCCGTCCTCCACACGGAGCCCACATGAACTTGTAGATCTGAGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS CAA 72 bp GCCTTTCTGGCCCCTGGCAGAACAGCTCTGGCTGAGTaGGGCAGGTCTTGTGAGTCAGCCCCTTGCCCTTTA +
Preference number: 6 (lower is better)
Translates to: AFLAPGRTALAE*GRSCESAPCPL
Trigger: TAAAGGGCAAGGGGCTGACTCACAAGACCTGCCCAACTCAGCCAGAGCTGTTCTGCCAGGGGCCAGAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS CAA 90 bp GAAGTCGGCACCAGCTCCTTGGGCCCCTCAGAGCTGCAGCCGTACTaGGACAGTGGTCCACAGGATCTCTCCTCAATGCTTGTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: EVGTSSLGPSELQPY*DSGPQDLSSMLVAS
Trigger: AGAAGCCACAAGCATTGAGGAGAGATCCTGTGGACCACTGTCCAAGTACGGCTGCAGCTCTGAGGGGCCCAAGGAGCTGGTGCCGACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565761.1
CDS GCA 72 bp GGAGGTCAAGGCTGCAGTGCGCCTCGATCACACCACTaGACTCAGCCTAGGCAGCAGAGTGAGACTGCTTTT +
Preference number: 6 (lower is better)
Translates to: GGQGCSAPRSHH*TQPRQQSETAF
Trigger: AAAAGCAGTCTCACTCTGCTGCCTAGGCTGAGTGCAGTGGTGTGATCGAGGCGCACTGCAGCCTTGACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565983.5
CDS GCA 72 bp TGCAGGTGTGGTGTGGGGAGCCAGCTAGGGCATTCCTaGAGTGGGGATGTGGCCAGACTCAGATCTACAAGT +
Preference number: 6 (lower is better)
Translates to: CRCGVGSQLGHS*SGDVARLRSTS
Trigger: ACTTGTAGATCTGAGTCTGGCCACATCCCCACTGCAGGAATGCCCTAGCTGGCTCCCCACACCACACCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS CCA 72 bp AGTGTTCATCCTCCTCCAGCCACTCCACAGACCCCGTaGTCGGATTGGCCCGACTGCAGAAGATCTTCATGG +
Preference number: 6 (lower is better)
Translates to: SVHPPPATPQTP*SDWPDCRRSSW
Trigger: CCATGAAGATCTTCTGCAGTCGGGCCAATCCGACCACGGGGTCTGTGGAGTGGCTGGAGGAGGATGAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000561806.5
ENST00000562050.5
ENST00000562381.7
ENST00000562456.1
ENST00000563562.5
ENST00000565356.5
ENST00000565745.5
ENST00000566341.5
ENST00000568975.5
ENST00000569047.7
ENST00000569571.5
ENST00000675132.1
CDS CCA 72 bp CTTGGGCCCCTCAGAGCTGCAGCCGTACTTGGACAGTaGTCCACAGGATCTCTCCTCAATGCTTGTGGCTTC +
Preference number: 6 (lower is better)
Translates to: LGPLRAAAVLGQ*STGSLLNACGF
Trigger: GAAGCCACAAGCATTGAGGAGAGATCCTGTGGACCACTGTCCAAGTACGGCTGCAGCTCTGAGGGGCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565761.1
ENST00000567542.5
CDS CCA 72 bp GGCTCGCCCAGGAGGAGAGAGACGGTCCTCAGAGCCTaGACGTATCGATCAGTTCTGTCCTGGTCATTGATC +
Preference number: 6 (lower is better)
Translates to: GSPRRRETVLRA*TYRSVLSWSLI
Trigger: GATCAATGACCAGGACAGAACTGATCGATACGTCCAGGCTCTGAGGACCGTCTCTCTCCTCCTGGGCGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565356.5
ENST00000567542.5
CDS TCA 72 bp TTACCTCGATGGCATAGCAGAAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGAGTCCCGTGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: LPRWHSRSRHLL*PPSLTRVPCQC
Trigger: GCACTGGCACGGGACTCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACTTCTGCTATGCCATCGAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562456.1
ENST00000563443.1
CDS TCA 72 bp TTTCCTCGATGGCATAGCAGAAGTCGGCACCTGCTGTaGCCGCCATCATTGACAAGAGTCCCGTGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: FPRWHSRSRHLL*PPSLTRVPCQC
Trigger: GCACTGGCACGGGACTCTTGTCAATGATGGCGGTCACAGCAGGTGCCGACTTCTGCTATGCCATCGAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS GCA 72 bp AAGTCCAGGGCACGCTTAATCATGTCGTCCATGATGTaGACGTCGAAGCCTTCGCAGTCACCACAGGGGCTC +
Preference number: 6 (lower is better)
Translates to: KSRARLIMSSMM*TSKPSQSPQGL
Trigger: GAGCCCCTGTGGTGACTGCGAAGGCTTCGACGTGCACATCATGGACGACATGATTAAGCGTGCCCTGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000563608.2
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS GCA 72 bp CAAAAGGTTCAAATGAGCCTCACAAGTTCATCTAGGTaGAGCCCTCAAGGCCGCCGCGGGAAACCCTCCGCT +
Preference number: 6 (lower is better)
Translates to: QKVQMSLTSSSR*SPQGRRGKPSA
Trigger: AGCGGAGGGTTTCCCGCGGCGGCCTTGAGGGCTGCACCTAGATGAACTTGTGAGGCTCATTTGAACCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565745.5
CDS GCA 72 bp AGAGGGCGACTGGAAGGTAGGAGGACAGAGCAGGCTTaGTCCTTTCTGCATGCTGCTGTTCTCATCAGGGTC +
Preference number: 6 (lower is better)
Translates to: RGRLEGRRTEQA*SFLHAAVLIRV
Trigger: GACCCTGATGAGAACAGCAGCATGCAGAAAGGAGCAAGCCTGCTCTGTCCTCCTACCTTCCAGTCGCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS GCA 72 bp CTGGCTGAGTTGGGCAGGTCTTGTGAGTCAGCCCCTTaGCCTTTATTAAGCGACTGTCCCTGCTCCACACTC +
Preference number: 6 (lower is better)
Translates to: LAELGRSCESAP*PLLSDCPCSTL
Trigger: GAGTGTGGAGCAGGGACAGTCGCTTAATAAAGGGCAAGGGGCTGACTCACAAGACCTGCCCAACTCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS CCA 72 bp GTTAGGTACAGCCAAAAGGGGGACCAAGAGGGCGACTaGAAGGTAGGAGGACAGAGCAGGCTTGCTCCTTTC +
Preference number: 6 (lower is better)
Translates to: VRYSQKGDQEGD*KVGGQSRLAPF
Trigger: GAAAGGAGCAAGCCTGCTCTGTCCTCCTACCTTCCAGTCGCCCTCTTGGTCCCCCTTTTGGCTGTACCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS CCA 72 bp GTGTGGTGTGGGGAGCCAGCTAGGGCATTCCTGCAGTaGGGATGTGGCCAGACTCAGATCTACAAGTTCATG +
Preference number: 6 (lower is better)
Translates to: VWCGEPARAFLQ*GCGQTQIYKFM
Trigger: CATGAACTTGTAGATCTGAGTCTGGCCACATCCCCACTGCAGGAATGCCCTAGCTGGCTCCCCACACCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS TCA 72 bp GAGCCTGGACGTATCGATCAGTTCTGTCCTGGTCATTaGTCTCTCCAAACCGAGGCCGGTTCCAGAGCAGGT +
Preference number: 6 (lower is better)
Translates to: EPGRIDQFCPGH*SLQTEAGSRAG
Trigger: ACCTGCTCTGGAACCGGCCTCGGTTTGGAGAGATCAATGACCAGGACAGAACTGATCGATACGTCCAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000564050.6
ENST00000565356.5
ENST00000566687.1
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS TCA 72 bp AAGCAGCCTTGCCAGTTGAGTTCTTGTGGACAAGTCTaGCTGTCAGAAATCCGCCGCGGGAAACCCTCCGCT +
Preference number: 6 (lower is better)
Translates to: KQPCQLSSCGQV*LSEIRRGKPSA
Trigger: AGCGGAGGGTTTCCCGCGGCGGATTTCTGACAGTCAGACTTGTCCACAAGAACTCAACTGGCAAGGCTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000449359.7
ENST00000562050.5
ENST00000562381.7
ENST00000565356.5
CDS TCA 72 bp ACCTGCCCTGGAGGCTGTAAAGATTACAACCAGACATaGGTCCCGTGCTCAGGAGAGCAGAGCAGAAGAGGG +
Preference number: 6 (lower is better)
Translates to: TCPGGCKDYNQT*VPCSGEQSRRG
Trigger: CCCTCTTCTGCTCTGCTCTCCTGAGCACGGGACTCATGTCTGGTTGTAATCTTTACAGCCTCCAGGGCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566708.1
CDS TCA 72 bp AAGCAGCCTTGCCAGTTGAGTTCTTGTGGACAAGTCTaGCTGTCAGAAATCCGGGTGTCCCGAGCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: KQPCQLSSCGQV*LSEIRVSRAAP
Trigger: TGGGGCAGCTCGGGACACCCGGATTTCTGACAGTCAGACTTGTCCACAAGAACTCAACTGGCAAGGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569571.5
CDS CCA 72 bp GTCCTCAGAGCCTGGACGTATCGATCAGTTCTGTCCTaGTCATTGATCTCTCCAAACCGAGGCCGGTTCCAG +
Preference number: 6 (lower is better)
Translates to: VLRAWTYRSVLS*SLISPNRGRFQ
Trigger: CTGGAACCGGCCTCGGTTTGGAGAGATCAATGACCAGGACAGAACTGATCGATACGTCCAGGCTCTGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000564050.6
ENST00000565356.5
ENST00000566687.1
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS CCA 72 bp CACACGCTGTCTGGCTTCAGCACGGTCCTCAGAGCCTaGACGTATCGATCAGTTCTGTCCTGGTCATTGATC +
Preference number: 6 (lower is better)
Translates to: HTLSGFSTVLRA*TYRSVLSWSLI
Trigger: GATCAATGACCAGGACAGAACTGATCGATACGTCCAGGCTCTGAGGACCGTGCTGAAGCCAGACAGCGTGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000566687.1
ENST00000568975.5
ENST00000675132.1
CDS CCA 72 bp GGCATTCCTGAAGCTGGGGTTGGTCAGAAGTCAGCGTaGAGGATTAGCATTCACAGTGGAGCTGCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: GIPEAGVGQKSA*RISIHSGAASA
Trigger: GGCTGAAGCAGCTCCACTGTGAATGCTAATCCTCCACGCTGACTTCTGACCAACCCCAGCTTCAGGAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563443.1
CDS CCA 72 bp TCTCGGGCAGTGAGAAACTGGGCCCCCACACTGTTATaGCTCAGACGCAGGGCTTACATACCACAGGGAATT +
Preference number: 6 (lower is better)
Translates to: SRAVRNWAPTLL*LRRRAYIPQGI
Trigger: AATTCCCTGTGGTATGTAAGCCCTGCGTCTGAGCCATAACAGTGTGGGGGCCCAGTTTCTCACTGCCCGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563443.1
CDS CCA 72 bp ATACAAACAGAAGCCTTGTCTCGGGCAGTGAGAAACTaGGCCCCCACACTGTTATGGCTCAGACGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: IQTEALSRAVRN*APTLLWLRRRA
Trigger: AGCCCTGCGTCTGAGCCATAACAGTGTGGGGGCCCAGTTTCTCACTGCCCGAGACAAGGCTTCTGTTTGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563443.1
CDS CAA 72 bp AGAGCCTGGACGTATCGATCAGTTCTGTCCTGGTCATaGATCTCTCCAAACCGAGGCCGGTTCCAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: RAWTYRSVLSWS*ISPNRGRFQSR
Trigger: CCTGCTCTGGAACCGGCCTCGGTTTGGAGAGATCAATGACCAGGACAGAACTGATCGATACGTCCAGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000564050.6
ENST00000565356.5
ENST00000566687.1
ENST00000567542.5
ENST00000568975.5
ENST00000675132.1
CDS CAA 72 bp ACAGGGAAGCGTGGCAGCAAGAACAAGAGGCACATCTaGCTGTTCCCTGCACACCCTGAACTCCACAACCAC +
Preference number: 6 (lower is better)
Translates to: TGKRGSKNKRHI*LFPAHPELHNH
Trigger: GTGGTTGTGGAGTTCAGGGTGTGCAGGGAACAGCAAGATGTGCCTCTTGTTCTTGCTGCCACGCTTCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS TCA 72 bp CAAACCTACCCCAACAGGCCACGGGAGCTGAGAGGCTaGGGAAAGACTGGCAAATCCAGCTTCTCAGAAAGA +
Preference number: 6 (lower is better)
Translates to: QTYPNRPRELRG*GKTGKSSFSER
Trigger: TCTTTCTGAGAAGCTGGATTTGCCAGTCTTTCCTCAGCCTCTCAGCTCCCGTGGCCTGTTGGGGTAGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563443.1
CDS TCA 72 bp CAGCTCCCAGGAGGGTTCAGGAAAATGGTGCATCGGTaGCCACAGGAAGTAAGCTCCCATCTTCCTGAGCTT +
Preference number: 6 (lower is better)
Translates to: QLPGGFRKMVHR*PQEVSSHLPEL
Trigger: AAGCTCAGGAAGATGGGAGCTTACTTCCTGTGGTCACCGATGCACCATTTTCCTGAACCCTCCTGGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675132.1
CDS CCA 72 bp GCAGGTGGATTTGGAAAGCATAGAAGTAAAAATGCCTaGCACCCCACTGTGGGATACCCACCACTCTCGGCC +
Preference number: 6 (lower is better)
Translates to: AGGFGKHRSKNA*HPTVGYPPLSA
Trigger: GGCCGAGAGTGGTGGGTATCCCACAGTGGGGTGCCAGGCATTTTTACTTCTATGCTTTCCAAATCCACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS GCA 72 bp GCAATCTCTACTGTTAGGTTACTCAGCGTTCCCATTTaGTTTCTAGCCCTCCCACAGCTGGGTAGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: AISTVRLLSVPI*FLALPQLGSQL
Trigger: GAGCTGGCTACCCAGCTGTGGGAGGGCTAGAAAGCAAATGGGAACGCTGAGTAACCTAACAGTAGAGATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565761.1
ENST00000567542.5
CDS CCA 72 bp GAAAGCATAGAAGTAAAAATGCCTGGCACCCCACTGTaGGATACCCACCACTCTCGGCCATCTGCCTTAGCA +
Preference number: 6 (lower is better)
Translates to: ESIEVKMPGTPL*DTHHSRPSALA
Trigger: TGCTAAGGCAGATGGCCGAGAGTGGTGGGTATCCCACAGTGGGGTGCCAGGCATTTTTACTTCTATGCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS TCA 72 bp ATAGAGACATACAAACAGAAGCCTTGTCTCGGGCAGTaGGAAACTGGGCCCCCACACTGTTATGGCTCAGAC +
Preference number: 6 (lower is better)
Translates to: IETYKQKPCLGQ*ETGPPHCYGSD
Trigger: GTCTGAGCCATAACAGTGTGGGGGCCCAGTTTCTCACTGCCCGAGACAAGGCTTCTGTTTGTATGTCTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563443.1
CDS CAA 72 bp TCTGTCCTTCACCCTGCTCACGGCAGCCCGGATACCTaGGTAGTATTTTACATTCTTGCAATCTCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: SVLHPAHGSPDT*VVFYILAISWW
Trigger: CCACCAGGAGATTGCAAGAATGTAAAATACTACCAAGGTATCCGGGCTGCCGTGAGCAGGGTGAAGGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562050.5
ENST00000566341.5
CDS CAA 72 bp TCTGTCCTTCACCCTGCTCACGGCAGCCCGGATACCTaGGTAGTATTTTACATTCTAAGGAAGACATGGCCG +
Preference number: 6 (lower is better)
Translates to: SVLHPAHGSPDT*VVFYILRKTWP
Trigger: CGGCCATGTCTTCCTTAGAATGTAAAATACTACCAAGGTATCCGGGCTGCCGTGAGCAGGGTGAAGGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS CAA 90 bp CAGCCTAGGCAGCAGAGTGAGACTGCTTTTACAGGACCACTCTGGTaGGCGTGTAGTGAATACACGACTCTCCAATTACTCAGAACAGTG +
Preference number: 6 (lower is better)
Translates to: QPRQQSETAFTGPLW*ACSEYTTLQLLRTV
Trigger: CACTGTTCTGAGTAATTGGAGAGTCGTGTATTCACTACACGCCAACCAGAGTGGTCCTGTAAAAGCAGTCTCACTCTGCTGCCTAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565983.5
CDS TCA 72 bp ACTTCAGCAGGCTTCGGTGCTTCCAAAAGGTTCAAATaGGCCTCACAAGTTCATCTAGGTGCAGCCCTCAAG +
Preference number: 6 (lower is better)
Translates to: TSAGFGASKRFK*ASQVHLGAALK
Trigger: CTTGAGGGCTGCACCTAGATGAACTTGTGAGGCTCATTTGAACCTTTTGGAAGCACCGAAGCCTGCTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565745.5
ENST00000568975.5
CDS TCA 72 bp TGCTGTTCTCATCAGGGTCCTCTCGGTAGGGGCAGTTaGTTGCAGACTCCAACTTTTCCCAATGATCCCATA +
Preference number: 6 (lower is better)
Translates to: CCSHQGPLGRGS*LQTPTFPNDPI
Trigger: TATGGGATCATTGGGAAAAGTTGGAGTCTGCAATCAACTGCCCCTACCGAGAGGACCCTGATGAGAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS TCA 72 bp TCAAGCCTTCTGAGGACCACATATCTACATCACTGGTaGGAACACCCAGCACCTAGAAACTTGGTGACCACC +
Preference number: 6 (lower is better)
Translates to: SSLLRTTYLHHW*EHPAPRNLVTT
Trigger: GGTGGTCACCAAGTTTCTAGGTGCTGGGTGTTCTCACCAGTGATGTAGATATGTGGTCCTCAGAAGGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568463.1
CDS CAA 90 bp GCTTCTCAGAAAGACACACTTTATAGAGACATACAAACAGAAGCCTaGTCTCGGGCAGTGAGAAACTGGGCCCCCACACTGTTATGGCTC +
Preference number: 6 (lower is better)
Translates to: ASQKDTLYRDIQTEA*SRAVRNWAPTLLWL
Trigger: GAGCCATAACAGTGTGGGGGCCCAGTTTCTCACTGCCCGAGACAAGGCTTCTGTTTGTATGTCTCTATAAAGTGTGTCTTTCTGAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563443.1
CDS CAA 90 bp TGCAGCCGTACTTGGACAGTGGTCCACAGGATCTCTCCTCAATGCTaGTGGCTTCTGGAAATCCTAATCTTCTCGTTTAGTTTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: CSRTWTVVHRISPQC*WLLEILIFSFSFSA
Trigger: GGCTGAGAAACTAAACGAGAAGATTAGGATTTCCAGAAGCCACAAGCATTGAGGAGAGATCCTGTGGACCACTGTCCAAGTACGGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565761.1
ENST00000567542.5
CDS CAA 72 bp CAATCAAGCTGGGCCTTGTCGACTTCGGAAAGGCGTTaGGATTTTGTTCTAAAAGCACTGGGAGCCACTCAA +
Preference number: 6 (lower is better)
Translates to: QSSWALSTSERR*DFVLKALGATQ
Trigger: TTGAGTGGCTCCCAGTGCTTTTAGAACAAAATCCAAACGCCTTTCCGAAGTCGACAAGGCCCAGCTTGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS CAA 72 bp AGAGCGGAAATTTTAGAGGCATTCCTGAAGCTGGGGTaGGTCAGAAGTCAGCGTGGAGGATTAGCATTCACA +
Preference number: 6 (lower is better)
Translates to: RAEILEAFLKLG*VRSQRGGLAFT
Trigger: TGTGAATGCTAATCCTCCACGCTGACTTCTGACCAACCCCAGCTTCAGGAATGCCTCTAAAATTTCCGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563443.1
CDS CAA 72 bp AAAGACACACTTTATAGAGACATACAAACAGAAGCCTaGTCTCGGGCAGTGAGAAACTGGGCCCCCACACTG +
Preference number: 6 (lower is better)
Translates to: KDTLYRDIQTEA*SRAVRNWAPTL
Trigger: CAGTGTGGGGGCCCAGTTTCTCACTGCCCGAGACAAGGCTTCTGTTTGTATGTCTCTATAAAGTGTGTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563443.1
CDS CAA 90 bp CGCTCCTCATCTCCTATCACATCTTCTGCTCAATCAAGCTGGGCCTaGTCGACTTCGGAAAGGCGTTTGGATTTTGTTCTAAAAGCACTG +
Preference number: 6 (lower is better)
Translates to: RSSSPITSSAQSSWA*STSERRLDFVLKAL
Trigger: CAGTGCTTTTAGAACAAAATCCAAACGCCTTTCCGAAGTCGACAAGGCCCAGCTTGATTGAGCAGAAGATGTGATAGGAGATGAGGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS CAA 90 bp GGCCGTCACTTACTACCAGTTATTATAAGTAAGTGGAAAGGTGCTTaGCAAAGTTCTAGAGTCACAGCTGGCAGTGGCAGTGCAAGTCAG +
Preference number: 6 (lower is better)
Translates to: GRHLLPVIISKWKGA*QSSRVTAGSGSASQ
Trigger: CTGACTTGCACTGCCACTGCCAGCTGTGACTCTAGAACTTTGCAAAGCACCTTTCCACTTACTTATAATAACTGGTAGTAAGTGACGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567542.5
CDS TCA 72 bp CTTGAAGATTTTTCTCAACAGTTTGTGAGAAGCTGCTaGACTCTCGACTGTAAACACCTGCTCCACCCCCAG +
Preference number: 6 (lower is better)
Translates to: LEDFSQQFVRSC*TLDCKHLLHPQ
Trigger: CTGGGGGTGGAGCAGGTGTTTACAGTCGAGAGTTCAGCAGCTTCTCACAAACTGTTGAGAAAAATCTTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000339507.9
ENST00000441236.3
ENST00000449359.7
ENST00000566687.1
ENST00000568975.5
ENST00000675132.1
CDS CCA 72 bp TCCTCATCTCCTATCACATCTTCTGCTCAATCAAGCTaGGCCTTGTCGACTTCGGAAAGGCGTTTGGATTTT +
Preference number: 6 (lower is better)
Translates to: SSSPITSSAQSS*ALSTSERRLDF
Trigger: AAAATCCAAACGCCTTTCCGAAGTCGACAAGGCCCAGCTTGATTGAGCAGAAGATGTGATAGGAGATGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS CCA 72 bp AGCAAAGCTTTCAACACAGGGTGTGTAAATCTCACCTaGACCTACAGTCACCTCGGTGGAATGCTTGTTGAT +
Preference number: 6 (lower is better)
Translates to: SKAFNTGCVNLT*TYSHLGGMLVD
Trigger: ATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGGTGAGATTTACACACCCTGTGTTGAAAGCTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561806.5
CDS CAA 72 bp TCTCCTATCACATCTTCTGCTCAATCAAGCTGGGCCTaGTCGACTTCGGAAAGGCGTTTGGATTTTGTTCTA +
Preference number: 6 (lower is better)
Translates to: SPITSSAQSSWA*STSERRLDFVL
Trigger: TAGAACAAAATCCAAACGCCTTTCCGAAGTCGACAAGGCCCAGCTTGATTGAGCAGAAGATGTGATAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339507.9
CDS CAA 72 bp ACTTGGACAGTGGTCCACAGGATCTCTCCTCAATGCTaGTGGCTTCTGGAAATCCTAATCTTCTCGTTTAGT +
Preference number: 6 (lower is better)
Translates to: TWTVVHRISPQC*WLLEILIFSFS
Trigger: ACTAAACGAGAAGATTAGGATTTCCAGAAGCCACAAGCATTGAGGAGAGATCCTGTGGACCACTGTCCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565761.1
ENST00000567542.5
CDS CAA 90 bp AGCCAGCTCCTTGTGTTAAAGCCGCTCTGCTGCAATATGTATGGCTaGTTTTCCTTTACCGACTCTAACTCAGAGAGCTTCACTAAAAAG +
Preference number: 6 (lower is better)
Translates to: SQLLVLKPLCCNMYG*FSFTDSNSESFTKK
Trigger: CTTTTTAGTGAAGCTCTCTGAGTTAGAGTCGGTAAAGGAAAACAAGCCATACATATTGCAGCAGAGCGGCTTTAACACAAGGAGCTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565761.1
CDS GCA 72 bp TTCATACAGATGTCTGGAAACTTCAGCAGGCTTCGGTaGTTCCAAAAGGTTCAAATGAGCCTCACAAGTTCA +
Preference number: 6 (lower is better)
Translates to: FIQMSGNFSRLR*FQKVQMSLTSS
Trigger: TGAACTTGTGAGGCTCATTTGAACCTTTTGGAAGCACCGAAGCCTGCTGAAGTTTCCAGACATCTGTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568975.5
CDS CAA 72 bp CTTGTGTTAAAGCCGCTCTGCTGCAATATGTATGGCTaGTTTTCCTTTACCGACTCTAACTCAGAGAGCTTC +
Preference number: 6 (lower is better)
Translates to: LVLKPLCCNMYG*FSFTDSNSESF
Trigger: GAAGCTCTCTGAGTTAGAGTCGGTAAAGGAAAACAAGCCATACATATTGCAGCAGAGCGGCTTTAACACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565761.1
CDS TCA 72 bp TCTACACCATACGCCTCTCAGTATCATTTAACATCATaGCCCCCAGGGATTCTTAACCTTCTTGTAATCCAA +
Preference number: 6 (lower is better)
Translates to: STPYASQYHLTS*PPGILNLLVIQ
Trigger: TTGGATTACAAGAAGGTTAAGAATCCCTGGGGGTCATGATGTTAAATGATACTGAGAGGCGTATGGTGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566430.2
CDS CAA 72 bp TCACCTGGACCTACAGTCACCTCGGTGGAATGCTTGTaGATAACCTTAATCTTATCACTAAAGCCATTTTTC +
Preference number: 6 (lower is better)
Translates to: SPGPTVTSVECL*ITLILSLKPFF
Trigger: GAAAAATGGCTTTAGTGATAAGATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561806.5
CDS CAA 72 bp ATCTCACCTGGACCTACAGTCACCTCGGTGGAATGCTaGTTGATAACCTTAATCTTATCACTAAAGCCATTT +
Preference number: 6 (lower is better)
Translates to: ISPGPTVTSVEC*LITLILSLKPF
Trigger: AAATGGCTTTAGTGATAAGATTAAGGTTATCAACAAGCATTCCACCGAGGTGACTGTAGGTCCAGGTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561806.5
CDS TCA 72 bp TTTAGTAAACACATACATCTTTCATCTATAACGGTCTaGCTCAATAGGCACAGTGACCCTTCTGTTGAAAAT +
Preference number: 6 (lower is better)
Translates to: FSKHIHLSSITV*LNRHSDPSVEN
Trigger: ATTTTCAACAGAAGGGTCACTGTGCCTATTGAGTCAGACCGTTATAGATGAAAGATGTATGTGTTTACTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565761.1