Pregenerated sensors for PRM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000175646Ensembl transcript IDs: ENST00000312511.4
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTTTTATTGGATGGTGGCATTTTCAAGATGTGGCAAGAGGATCTTaGAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTGCTA | + |
|
Preference number: 1 (lower is better) Translates to: IFIGWWHFQDVARGS*SLVTFSGRSLVDVL Trigger: TAGCACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACATCTTGAAAATGCCACCATCCAATAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| 3UTR CAA 90 bp | GATTTTTATTGGATGGTGGCATTTTCAAGATGTGGCAAGAGGATCTaGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: DFYWMVAFSRCGKRI*KSGNILRQEFGGCA Trigger: AGCACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACATCTTGAAAATGCCACCATCCAATAAAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| 3UTR TCA 72 bp | GGATGGTGGCATTTTCAAGATGTGGCAAGAGGATCTTaGAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GWWHFQDVARGS*SLVTFSGRSLV Trigger: CACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACATCTTGAAAATGCCACCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR TCA 90 bp | AAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTGCTGGGCACCACCTTGGCTaGGCCAGCCAACCTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRILKSGNILRQEFGGCAGHHLG*ASQPVS Trigger: GCTCACAGGTTGGCTGGCTCAGCCAAGGTGGTGCCC...AGCACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTGCTGGCGGCAGCACCTCATaGCTCTCCTCCGTGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRILKSGNILRQEFGGCAGGSTS*LSSVSG Trigger: GCCAGACACGGAGGAGAGCCATGAGGTGCTGCCGCC...AGCACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CCA 90 bp | GGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTATCGCGGTCTGTACCTaGGGCGGCAGCACCTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GKRILKSGNILRQEFGGCIAVCT*GGSTSW Trigger: CCATGAGGTGCTGCCGCCCCAGGTACAGACCGCGAT...ACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR TCA 90 bp | GGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTGAGCCAGCCAACCTGTaGGCAGGTGGAACTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKRILKSGNILRQEFGGCEPANL*AGGTLW Trigger: CCACAGAGTTCCACCTGCTCACAGGTTGGCTGGCTC...ACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CCA 90 bp | AGATGTGGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGCTCTCCTCCGTGTCTaGCAGCTCCGCCTCCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RCGKRILKSGNILRQEFGALLRV*QLRLLR Trigger: ACGAAGGAGGCGGAGCTGCCAGACACGGAGGAGAGC...ACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR GCA 90 bp | TGTGGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATCTGGCGGTAATATCTaGTCCGGCTCTGGCTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: CGKRILKSGNILRQEFGGSGGNI*SGSGCD Trigger: GTCGCAGCCAGAGCCGGAGCAGATATTACCGCCAGA...TCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CCA 90 bp | TGTGGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGAGGTGCAGGATGGGCTTaGCCTGAATGCTCAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGKRILKSGNILRQEFGGGAGWA*PECSEQ Trigger: CTGCTCTGAGCATTCAGGCCAAGCCCATCCTGCACC...TCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CCA 90 bp | AGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTGCTATTAGCAGGGCACCACCTTaGCTGAGCCAGCCAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RILKSGNILRQEFGGCAISRAPP*LSQPTC Trigger: ACAGGTTGGCTGGCTCAGCCAAGGTGGTGCCCTGCT...AATAGCACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CCA 90 bp | AGATGTGGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTATCTGTACCTGGCCATaGTGCAGGATGGGCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RCGKRILKSGNILRQEFGICTWP*CRMGLA Trigger: GGCCAAGCCCATCCTGCACCATGGCCAGGTACAGAT...ACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTGCTGACAGCATCTGTACCTaGCCATGGTGCAGGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRILKSGNILRQEFGGCADSICT*PWCRMG Trigger: GCCCATCCTGCACCATGGCCAGGTACAGATGCTGTC...AGCACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR GCA 90 bp | AAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTGCTTCCGCCTCCTTCGTCTaGGACTTCTTTGTCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRILKSGNILRQEFGGCASASFV*DFFVSG Trigger: GCCAGAGACAAAGAAGTCGCAGACGAAGGAGGCGGA...AGCACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CCA 90 bp | AGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTGCTATTGGCCATGGTGCAGGATaGGCTTGGCCTGAATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RILKSGNILRQEFGGCAIGHGAG*AWPECS Trigger: TGAGCATTCAGGCCAAGCCCATCCTGCACCATGGCC...AATAGCACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CCA 90 bp | AGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTGCTATTTATCTGCTCCGGCTCTaGCTGCGACAGCATCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RILKSGNILRQEFGGCAIYLLRL*LRQHLY Trigger: GTACAGATGCTGTCGCAGCCAGAGCCGGAGCAGATA...AATAGCACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR TCA 90 bp | AAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTGCTTCCTTAGCAGGCTCCTaGTTTTTATTGGATGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRILKSGNILRQEFGGCASLAGS*FLLDGG Trigger: GCCACCATCCAATAAAAATCAGGAGCCTGCTAAGGA...AGCACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR TCA 90 bp | AGATGTGGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGTGGCAAGAGGATCTTaGAGTCTGGTAACATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RCGKRILKSGNILRQEFGVARGS*SLVTFS Trigger: TGAGAATGTTACCAGACTTCAAGATCCTCTTGCCAC...ACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTGCTCAGGCAGGAGTTTGGTaGATGTGCTATTTTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KRILKSGNILRQEFGGCAQAGVW*MCYFVQ Trigger: TTGCACAAAATAGCACATCCACCAAACTCCTGCCTG...AGCACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CCA 90 bp | AGATGTGGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTTCTCAGGCAGGAGTTTaGTGGATGTGCTATTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RCGKRILKSGNILRQEFGSQAGV*WMCYFV Trigger: CACAAAATAGCACATCCACCAAACTCCTGCCTGAGA...ACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CCA 90 bp | TGTGGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGAGGCATTTTCAAGATGTaGCAAGAGGATCTTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CGKRILKSGNILRQEFGGGIFKM*QEDLEV Trigger: GACTTCAAGATCCTCTTGCCACATCTTGAAAATGCC...TCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| 3UTR CAA 72 bp | TGGATGGTGGCATTTTCAAGATGTGGCAAGAGGATCTaGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WMVAFSRCGKRI*KSGNILRQEFG Trigger: ACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACATCTTGAAAATGCCACCATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR TCA 90 bp | GGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTCTTTTCAACATTTATTaGCAGGCGGCATTGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKRILKSGNILRQEFGGCLFNIY*QAALFL Trigger: AAGGAACAATGCCGCCTGTCAATAAATGTTGAAAAG...ACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR GCA 90 bp | AGATGTGGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGAGTTTGGTGGATGTaGTATTTTGTGCAATTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RCGKRILKSGNILRQEFGGVWWM*YFVQLV Trigger: CACTAATTGCACAAAATAGCACATCCACCAAACTCC...ACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CCA 90 bp | AGATGTGGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTCTGATTTTTATTGGATaGTGGCATTTTCAAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RCGKRILKSGNILRQEFGLIFIG*WHFQDV Trigger: CACATCTTGAAAATGCCACCATCCAATAAAAATCAG...ACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CCA 90 bp | AGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTGCTATTGCTCCTGATTTTTATTaGATGGTGGCATTTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RILKSGNILRQEFGGCAIAPDFY*MVAFSR Trigger: TCTTGAAAATGCCACCATCCAATAAAAATCAGGAGC...AATAGCACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS CCA 90 bp | CTGGCTGCGACAGCATCTGTACCTGGCCATGGTGCAGGATGGGCTTaGCCTGAATGCTCAGAGCAGGGCACCACCTTGGCTGAGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LAATASVPGHGAGWA*PECSEQGTTLAEPA Trigger: GGCTGGCTCAGCCAAGGTGGTGCCCTGCTCTGAGCATTCAGGCCAAGCCCATCCTGCACCATGGCCAGGTACAGATGCTGTCGCAGCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS CCA 90 bp | CCGGCTCTGGCTGCGACAGCATCTGTACCTGGCCATGGTGCAGGATaGGCTTGGCCTGAATGCTCAGAGCAGGGCACCACCTTGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PALAATASVPGHGAG*AWPECSEQGTTLAE Trigger: CTCAGCCAAGGTGGTGCCCTGCTCTGAGCATTCAGGCCAAGCCCATCCTGCACCATGGCCAGGTACAGATGCTGTCGCAGCCAGAGCCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS GCA 90 bp | ACCTCATGGCTCTCCTCCGTGTCTGGCAGCTCCGCCTCCTTCGTCTaGGACTTCTTTGTCTCTGGCGGTAATATCTGCTCCGGCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TSWLSSVSGSSASFV*DFFVSGGNICSGSG Trigger: GCCAGAGCCGGAGCAGATATTACCGCCAGAGACAAAGAAGTCGCAGACGAAGGAGGCGGAGCTGCCAGACACGGAGGAGAGCCATGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS GCA 90 bp | TCCGCCTCCTTCGTCTGCGACTTCTTTGTCTCTGGCGGTAATATCTaGTCCGGCTCTGGCTGCGACAGCATCTGTACCTGGCCATGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SASFVCDFFVSGGNI*SGSGCDSICTWPWC Trigger: GCACCATGGCCAGGTACAGATGCTGTCGCAGCCAGAGCCGGAGCAGATATTACCGCCAGAGACAAAGAAGTCGCAGACGAAGGAGGCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CAA 90 bp | AGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTGCTATTGAGCAGGGCACCACCTaGGCTGAGCCAGCCAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: RILKSGNILRQEFGGCAIEQGTT*AEPANL Trigger: CAGGTTGGCTGGCTCAGCCAAGGTGGTGCCCTGCTC...AATAGCACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CAA 90 bp | GGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATGTTCGTCTGCGACTTCTTaGTCTCTGGCGGTAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: GKRILKSGNILRQEFGGCSSATS*SLAVIS Trigger: AGATATTACCGCCAGAGACAAAGAAGTCGCAGACGA...ACATCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CAA 90 bp | TGTGGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTGGATTCTCAGGCAGGAGTTaGGTGGATGTGCTATTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CGKRILKSGNILRQEFGGFSGRS*VDVLFC Trigger: ACAAAATAGCACATCCACCAAACTCCTGCCTGAGAA...TCCACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CAA 90 bp | AGATGTGGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTTGTGGCAAGAGGATCTaGAAGTCTGGTAACATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RCGKRILKSGNILRQEFGCGKRI*KSGNIL Trigger: GAGAATGTTACCAGACTTCAAGATCCTCTTGCCACA...ACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS-3UTR CAA 90 bp | AGATGTGGCAAGAGGATCTTGAAGTCTGGTAACATTCTCAGGCAGGAGTTTGGTACTTTTCAACATTTATaGACAGGCGGCATTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RCGKRILKSGNILRQEFGTFQHL*TGGIVP Trigger: AGGAACAATGCCGCCTGTCAATAAATGTTGAAAAGT...ACCAAACTCCTGCCTGAGAATGTTACCAGACTTCAAGATCCTCTTGCCACATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS CAA 90 bp | TCTCCTCCGTGTCTGGCAGCTCCGCCTCCTTCGTCTGCGACTTCTTaGTCTCTGGCGGTAATATCTGCTCCGGCTCTGGCTGCGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPPCLAAPPPSSATS*SLAVISAPALAATA Trigger: TGCTGTCGCAGCCAGAGCCGGAGCAGATATTACCGCCAGAGACAAAGAAGTCGCAGACGAAGGAGGCGGAGCTGCCAGACACGGAGGAGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS CAA 72 bp | TGTCTGGCAGCTCCGCCTCCTTCGTCTGCGACTTCTTaGTCTCTGGCGGTAATATCTGCTCCGGCTCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CLAAPPPSSATS*SLAVISAPALA Trigger: AGCCAGAGCCGGAGCAGATATTACCGCCAGAGACAAAGAAGTCGCAGACGAAGGAGGCGGAGCTGCCAGACA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS CCA 72 bp | TGTGCAATTAGTGTCTTCTACATCGCGGTCTGTACCTaGGGCGGCAGCACCTCATGGCTCTCCTCCGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CAISVFYIAVCT*GGSTSWLSSVS Trigger: AGACACGGAGGAGAGCCATGAGGTGCTGCCGCCCCAGGTACAGACCGCGATGTAGAAGACACTAATTGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||
| CDS GCA 72 bp | TTCGTCTGCGACTTCTTTGTCTCTGGCGGTAATATCTaGTCCGGCTCTGGCTGCGACAGCATCTGTACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FVCDFFVSGGNI*SGSGCDSICTW Trigger: CCAGGTACAGATGCTGTCGCAGCCAGAGCCGGAGCAGATATTACCGCCAGAGACAAAGAAGTCGCAGACGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312511.4 |
||